Citrus Sinensis ID: 011833
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 476 | ||||||
| 255567812 | 470 | catalytic, putative [Ricinus communis] g | 0.926 | 0.938 | 0.631 | 1e-165 | |
| 255570661 | 595 | catalytic, putative [Ricinus communis] g | 0.890 | 0.712 | 0.569 | 1e-160 | |
| 359472659 | 584 | PREDICTED: uncharacterized protein LOC10 | 0.888 | 0.724 | 0.562 | 1e-156 | |
| 224101773 | 599 | predicted protein [Populus trichocarpa] | 0.903 | 0.717 | 0.554 | 1e-156 | |
| 224108405 | 597 | predicted protein [Populus trichocarpa] | 0.920 | 0.733 | 0.548 | 1e-155 | |
| 449458767 | 588 | PREDICTED: uncharacterized protein LOC10 | 0.886 | 0.717 | 0.555 | 1e-154 | |
| 449503403 | 562 | PREDICTED: uncharacterized protein LOC10 | 0.886 | 0.750 | 0.555 | 1e-154 | |
| 224118770 | 464 | predicted protein [Populus trichocarpa] | 0.932 | 0.956 | 0.602 | 1e-152 | |
| 356534346 | 581 | PREDICTED: uncharacterized protein LOC10 | 0.888 | 0.728 | 0.535 | 1e-152 | |
| 356574234 | 566 | PREDICTED: uncharacterized protein LOC10 | 0.888 | 0.747 | 0.543 | 1e-150 |
| >gi|255567812|ref|XP_002524884.1| catalytic, putative [Ricinus communis] gi|223535847|gb|EEF37508.1| catalytic, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 291/461 (63%), Positives = 346/461 (75%), Gaps = 20/461 (4%)
Query: 33 VPLRALYAHRGVTEKKPSNVVR----NKPKRKICTADELHYVAVPNSDWRLALWRYLPSP 88
VP + + H ++ P R NK K +ICTADELHYV V SDW+LALWRYLPSP
Sbjct: 10 VPTTSTFYHLKNSKSPPPFPARLRAANKKKPEICTADELHYVPVSTSDWKLALWRYLPSP 69
Query: 89 AAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGE 148
+RNHPLLLLSG+GTNAIGYDLSPE SFAR+MSGQGFDTWILE+RGAGLS +E+GE
Sbjct: 70 TR-KRNHPLLLLSGVGTNAIGYDLSPESSFARFMSGQGFDTWILELRGAGLSVLNMEYGE 128
Query: 149 DSMITSANAKSTG---GT------TLS------RESQSKSQLMETVMQSSQRLSGLLNEG 193
D+ S + GT TLS S + + + + Q+ ++ EG
Sbjct: 129 DTEAVSKTDRLKSKLLGTFIRLFGTLSGPFFEDNYSGENFTVAKQIKEFRQKFLNIIEEG 188
Query: 194 EDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDG 253
+ QFFD Q+R S +LEDF KQ+DLI+K DWDFDHYLEED+PA MEYIRT PKDG
Sbjct: 189 QHSSKSQFFDFQDRFSNTLEDFLKQVDLILKYDWDFDHYLEEDLPAAMEYIRTQCCPKDG 248
Query: 254 KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQ 313
KLLAVGHSMGGILLYAMLS FEG+D G SVTTLASSLDY PS S L+LLLP+++P +
Sbjct: 249 KLLAVGHSMGGILLYAMLSKFCFEGRDPGLTSVTTLASSLDYTPSKSSLKLLLPVANPAK 308
Query: 314 ALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKL 373
NVP+IP+G LAA HPFAS PPY+LSWL ISAP MMHP+LF+KL+ +NF ++P KL
Sbjct: 309 TFNVPIIPIGALLAAAHPFASRPPYILSWLNPQISAPGMMHPKLFDKLVMNNFCSVPAKL 368
Query: 374 ISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHL 433
+ QLTT F+EGGL +R+G+FFYKDH+GK+NVPVLA+A DQDLICP EAVYETVK+IPEHL
Sbjct: 369 LLQLTTAFEEGGLRNRNGSFFYKDHLGKSNVPVLAIAGDQDLICPPEAVYETVKVIPEHL 428
Query: 434 VSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474
V+++VFGEPRGPHYAHYDLVG LAA+QVYPCII FL RHD
Sbjct: 429 VTYQVFGEPRGPHYAHYDLVGGHLAAHQVYPCIINFLNRHD 469
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255570661|ref|XP_002526285.1| catalytic, putative [Ricinus communis] gi|223534366|gb|EEF36074.1| catalytic, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 300/527 (56%), Positives = 345/527 (65%), Gaps = 103/527 (19%)
Query: 51 NVVRNKPKRKICTADELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGY 110
+ V+ K ICTADELHYV+VPNSDWRLALWRY PS AP RNHPLLLLSG+GTNAIGY
Sbjct: 69 STVKLPEKPPICTADELHYVSVPNSDWRLALWRYHPSSQAPARNHPLLLLSGVGTNAIGY 128
Query: 111 DLSPEYSFARYMSGQGFDTWILEVRGAGL------------SAHRV-------------- 144
DLSP SFARYMSGQGF+TW+LEVRGAGL SAH V
Sbjct: 129 DLSPGSSFARYMSGQGFETWVLEVRGAGLSVQETNPKEIQQSAHAVSLEMEAAAKNVTNE 188
Query: 145 --------------EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLL 190
F + + I + TG T+ ES+ ++L ET M+ S+RLSG L
Sbjct: 189 ALPSIDQPTNNVPSSFSDSNKILTVKEDPTGIATVWDESKLVTKLTETFMRLSERLSGFL 248
Query: 191 NEGE---------DPDAP--------------------------------QFFDLQERLS 209
+EG+ D A Q DL +RL
Sbjct: 249 SEGQLKIISDKLFDQIAKLLGDSQLSERFNEIRGKLLSLMETRQNSVITSQIRDLSQRLV 308
Query: 210 TSLED----------------------FQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTL 247
E+ FQKQLDLIVK DWDFD+YLEEDVPA MEYIR
Sbjct: 309 NIFEEGQKSVSPQLFDLQERLSATIEDFQKQLDLIVKYDWDFDNYLEEDVPAAMEYIRAK 368
Query: 248 SKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLP 307
SKPKDGKLLA+GHSMGGILLYAMLS CG EG+DSG A+V TLASS+DY SNS L+LLLP
Sbjct: 369 SKPKDGKLLAIGHSMGGILLYAMLSRCGCEGRDSGLAAVVTLASSVDYTSSNSRLKLLLP 428
Query: 308 LSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFG 367
L+DP QALNVPV+PLG L+A +P +S PPYVLSWL ++ISA DMMHPEL EKL+ +NF
Sbjct: 429 LADPAQALNVPVVPLGALLSAAYPLSSRPPYVLSWLNYMISAEDMMHPELLEKLVLNNFC 488
Query: 368 NIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVK 427
IP KLI QLTT F++GGLCDRSG +FYKDH+ K+NVPVLALA D+DLICP EAV ETV+
Sbjct: 489 TIPAKLILQLTTAFRDGGLCDRSGKYFYKDHLHKSNVPVLALAGDEDLICPPEAVEETVR 548
Query: 428 LIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474
LIPEHLV++KVFGEP GPHYAHYDLVG RLA QVYPCII+FL+ HD
Sbjct: 549 LIPEHLVTYKVFGEPGGPHYAHYDLVGGRLAVEQVYPCIIQFLSHHD 595
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359472659|ref|XP_002279891.2| PREDICTED: uncharacterized protein LOC100247521 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 295/524 (56%), Positives = 337/524 (64%), Gaps = 101/524 (19%)
Query: 52 VVRNKPKRKICTADELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYD 111
V + + K ICTADELHYV+V NSDWRLALWRY PSP AP RNHPLLLLSG+GTNAIG+D
Sbjct: 59 VEKIQEKPSICTADELHYVSVSNSDWRLALWRYSPSPQAPPRNHPLLLLSGVGTNAIGFD 118
Query: 112 LSPEYSFARYMSGQGFDTWILEVRGAGLSAH-------RVEFGEDSMITSANAKSTGGT- 163
LSP SFARYM+GQGFDTWILE RGAGLS + S A A +T GT
Sbjct: 119 LSPGSSFARYMAGQGFDTWILEFRGAGLSMQGLNSKQIKQSANAISQQIKAAASATNGTA 178
Query: 164 ------------------------------TLSRESQSKSQLMETVMQSSQRLSGLLNEG 193
T+ ES+ +L ET M S+RLSG L+EG
Sbjct: 179 AKSAQQSNIVPGALEESKISAVKEDTMRIATVWDESKLVMKLTETFMLLSERLSGFLSEG 238
Query: 194 -----------------EDPDAPQFF------------------------DLQERL---- 208
ED + F DL +RL
Sbjct: 239 QLKIMSAKLFDQISKLIEDSQLSERFNEVRGNLSRLLETRQNSGITSQIRDLSQRLVNII 298
Query: 209 ------------------STSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKP 250
S+++EDFQKQLDLIVK DWDFD YLEEDVPA MEYI +KP
Sbjct: 299 EEGQRSVSPQLFDLQERFSSTIEDFQKQLDLIVKYDWDFDQYLEEDVPAAMEYIMAQTKP 358
Query: 251 KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSD 310
KDGKLLA+GHSMGGILLYA LS GFEG+D A++ TLASSLDY SNS L++LLPL+D
Sbjct: 359 KDGKLLAIGHSMGGILLYARLSKYGFEGRDPRLAAIVTLASSLDYTSSNSSLKMLLPLAD 418
Query: 311 PIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIP 370
P QALNVPV+PLG LAA +P +S PPYVLSWL +LISA DMMHP+L +KL+ +NF IP
Sbjct: 419 PAQALNVPVVPLGALLAAAYPLSSGPPYVLSWLNYLISAEDMMHPKLLKKLVLNNFCTIP 478
Query: 371 TKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIP 430
KL+ QLTT F+EGGLCDRSG FFYKDH+ KTNVPVLALA DQDLICP EAVYET KLIP
Sbjct: 479 AKLLLQLTTAFREGGLCDRSGKFFYKDHLHKTNVPVLALAGDQDLICPPEAVYETAKLIP 538
Query: 431 EHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474
EHLV+++VFG P GPHYAHYDLVG RLA QVYP IIEFL+ +D
Sbjct: 539 EHLVTYRVFGAPEGPHYAHYDLVGGRLAVEQVYPSIIEFLSSND 582
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224101773|ref|XP_002312415.1| predicted protein [Populus trichocarpa] gi|222852235|gb|EEE89782.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 301/543 (55%), Positives = 341/543 (62%), Gaps = 113/543 (20%)
Query: 42 RGVTEKKPSNVVRNKPKRKICTADELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLS 101
R + + VV+ K ICTADELHYV+V NSDWRLALWRY PSP AP RNHPLLLLS
Sbjct: 62 RAFSTESTEPVVKVPDKPPICTADELHYVSVSNSDWRLALWRYHPSPQAPPRNHPLLLLS 121
Query: 102 GIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGL------------SAHRVEFGED 149
G+GTNA+GYDLSP SFARYMS QGF+TWILEVRGAGL SAH V
Sbjct: 122 GVGTNAVGYDLSPGSSFARYMSDQGFETWILEVRGAGLSIQGSTPKDVHQSAHEV----- 176
Query: 150 SMITSANAKSTGGTTLS---------------------------------RESQSKSQLM 176
S A AKS TLS ES+ ++L
Sbjct: 177 SEEMEAVAKSVTNGTLSVDQQPSNVPSPPSDSRVSLVEEDSHLAGIVSVWDESKLVTKLT 236
Query: 177 ETVMQSSQRLSGLLNEGE-----------------------------------------D 195
E M+ S+RLSG L+E E
Sbjct: 237 EIFMRLSERLSGFLSESELKIMFAELVDQISKLLVDSQLSERMNEIRGKLLSLLEARQNS 296
Query: 196 PDAPQFFDLQERLSTSLE----------------------DFQKQLDLIVKNDWDFDHYL 233
A QF DL + L +E DFQKQLDLIVK DWDFD+YL
Sbjct: 297 AIAGQFRDLSQGLVNVIEEGQKSVSPQLFDLQERLSSIIEDFQKQLDLIVKYDWDFDNYL 356
Query: 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293
EEDVPA MEYIR L+KPKDGKLLA+GHSMGGILLYAMLS CG++G+DSG A+ TLASSL
Sbjct: 357 EEDVPAAMEYIRALTKPKDGKLLAIGHSMGGILLYAMLSRCGWDGRDSGLAATVTLASSL 416
Query: 294 DYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMM 353
DY PSNS L+LLLPL+DP QALNVPV+PLG L+A +P ++ PPYVLSWL ISA DMM
Sbjct: 417 DYTPSNSRLKLLLPLADPAQALNVPVVPLGAMLSAAYPLSTRPPYVLSWLNDFISARDMM 476
Query: 354 HPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQ 413
HPEL EKL+ +NF IP KL+ QLTT FQ GLCDRSG FFYK+H+ K+NVPVLA+A DQ
Sbjct: 477 HPELLEKLVLNNFCTIPAKLLLQLTTAFQNRGLCDRSGKFFYKEHLHKSNVPVLAIAGDQ 536
Query: 414 DLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473
DLICP EAV ETV+L PEHL S+KVFGEP GPHYAHYDLVG R A QVYPCIIEFL+R
Sbjct: 537 DLICPPEAVEETVRLFPEHLASYKVFGEPGGPHYAHYDLVGGRKAVEQVYPCIIEFLSRC 596
Query: 474 DMT 476
D+T
Sbjct: 597 DLT 599
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224108405|ref|XP_002314836.1| predicted protein [Populus trichocarpa] gi|222863876|gb|EEF01007.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 297/541 (54%), Positives = 345/541 (63%), Gaps = 103/541 (19%)
Query: 39 YAHRGVTEKKPSNVVRNKPKRKICTADELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLL 98
+ R + + VV+ K ICTADELHYV+V NSDWR ALWRY PSP AP RNHPLL
Sbjct: 57 FRARTFSSESTEPVVKVPEKPPICTADELHYVSVSNSDWRPALWRYHPSPQAPPRNHPLL 116
Query: 99 LLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLS------------AHRVEF 146
LLSG+GTNAIGYDLSP SFARYMSGQGF+TWILEVRGAGLS AH V
Sbjct: 117 LLSGLGTNAIGYDLSPGSSFARYMSGQGFETWILEVRGAGLSVQGSTPKVVQQAAHEVSE 176
Query: 147 GEDSMITSANAKS----------------------------TGGTTLSRESQSKSQLMET 178
+++ S S G T+ ES+ ++L E
Sbjct: 177 QMEAVTKSMANGSLSTDQQPSKVPSPVSDSRVSFVEEDPHLAGIVTVWDESKLVTKLTEV 236
Query: 179 VMQSSQRLSGLLNEG-----------------EDPD------------------------ 197
M+ S+RLSG L+E ED
Sbjct: 237 FMRLSERLSGFLSESQSKIMFAKLVDQIAKILEDSQLSERMNEIRGKLLSLLEARQNSAI 296
Query: 198 APQFFDLQERL----------------------STSLEDFQKQLDLIVKNDWDFDHYLEE 235
A QF DL + L S+++EDFQKQLDLIVK DWDFD+YLEE
Sbjct: 297 AGQFRDLSQGLVNVIEEGQKSVSPQLFDLQERLSSTIEDFQKQLDLIVKYDWDFDNYLEE 356
Query: 236 DVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295
DVPA MEYIR +KPKDGKLLA+GHSMGGILLYAMLS C +EG+DSG A++ TLASSL+Y
Sbjct: 357 DVPAAMEYIRAQTKPKDGKLLAIGHSMGGILLYAMLSRCSYEGRDSGLAAIGTLASSLNY 416
Query: 296 RPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHP 355
PS S L+LLLPL+DP QALNVPV+PLG L+A +P ++ PPYVLSWL LISA DMMHP
Sbjct: 417 TPSKSRLKLLLPLADPAQALNVPVVPLGAMLSAAYPLSTRPPYVLSWLNDLISAQDMMHP 476
Query: 356 ELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDL 415
EL EKL+ +NF IP KLI QL T F+ GGLCDRSG FFY+DH+ K VPVLA+A D+DL
Sbjct: 477 ELLEKLVLNNFCTIPAKLILQLATAFRNGGLCDRSGKFFYQDHLHKNKVPVLAIAGDRDL 536
Query: 416 ICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHDM 475
ICP AV ETVKLIPEHL ++KVFGEP GPHYAHYDLVG RLA QVYPCIIEFL+R+D+
Sbjct: 537 ICPPVAVEETVKLIPEHLATYKVFGEPGGPHYAHYDLVGGRLAVEQVYPCIIEFLSRYDL 596
Query: 476 T 476
T
Sbjct: 597 T 597
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449458767|ref|XP_004147118.1| PREDICTED: uncharacterized protein LOC101217845 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 296/533 (55%), Positives = 339/533 (63%), Gaps = 111/533 (20%)
Query: 53 VRNKPKRKICTADELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDL 112
VR K ICTADELHYV+VPNSDWRLALWRY PSP AP RNHPLLLLSG+GTNAIGYDL
Sbjct: 54 VRVPDKPSICTADELHYVSVPNSDWRLALWRYHPSPQAPPRNHPLLLLSGVGTNAIGYDL 113
Query: 113 SPEYSFARYMSGQGFDTWILEVRGAGLS---------AHRVEFGEDSM------------ 151
+P SFAR+MSGQGFDTWILEVRGAGLS H + D M
Sbjct: 114 APGCSFARHMSGQGFDTWILEVRGAGLSLQEPNLKEIEHSAKVKSDKMEAASEIKINGTS 173
Query: 152 --------ITSANAKS-------------------TGGTTLSRESQSKSQLMETVMQSSQ 184
I S AKS G TT+ ES S+L ET M+ S+
Sbjct: 174 KEVKESTKILSDLAKSDSCINGKESASSMVEEEDFIGITTIWDESSLVSELTETFMRLSE 233
Query: 185 RLSGLLNEGEDP-----------------------------------------DAPQFFD 203
RLSG L+EG+ A Q D
Sbjct: 234 RLSGFLSEGQSRIMSAKLFDQISKLLVDSQLSERFNEVRGRLSNLLETGQTSVIAGQIRD 293
Query: 204 LQERL----------------------STSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVM 241
L +RL S++++DFQKQLDLIVK DWDFDHYL EDVPA +
Sbjct: 294 LSQRLVEIIDDGQRSVSPPLFNLQDRFSSTIDDFQKQLDLIVKYDWDFDHYLLEDVPAAI 353
Query: 242 EYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSL 301
+YIR +SKP+DGKLLA+GHSMGGILLYA LS CG EG+D FA++ TLASSLDY PS S
Sbjct: 354 DYIRDVSKPRDGKLLAIGHSMGGILLYAELSRCGCEGRDPRFAAIVTLASSLDYTPSKSA 413
Query: 302 LRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKL 361
L+LLLPL+DP QALNVPV+PLG L+A +P +S PYV SWL LISA DMMHPE+ +KL
Sbjct: 414 LKLLLPLADPAQALNVPVVPLGALLSASYPLSSRSPYVFSWLNNLISAEDMMHPEMLKKL 473
Query: 362 IFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEA 421
+ +NF IP KL+ QLTT F+EGGL DRS TFFYKDHI K NVPVLA+A DQDLICP A
Sbjct: 474 VLNNFCTIPAKLVLQLTTAFREGGLRDRSNTFFYKDHIHKCNVPVLAIAGDQDLICPPVA 533
Query: 422 VYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474
V ET KLIP+HLV++K FGEP GPHYAHYDLVG RLA QVYPCIIEF+++HD
Sbjct: 534 VEETAKLIPQHLVTYKCFGEPEGPHYAHYDLVGGRLAVEQVYPCIIEFISQHD 586
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449503403|ref|XP_004161985.1| PREDICTED: uncharacterized protein LOC101228788 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 296/533 (55%), Positives = 339/533 (63%), Gaps = 111/533 (20%)
Query: 53 VRNKPKRKICTADELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDL 112
VR K ICTADELHYV+VPNSDWRLALWRY PSP AP RNHPLLLLSG+GTNAIGYDL
Sbjct: 28 VRVPDKPSICTADELHYVSVPNSDWRLALWRYHPSPQAPPRNHPLLLLSGVGTNAIGYDL 87
Query: 113 SPEYSFARYMSGQGFDTWILEVRGAGLS---------AHRVEFGEDSM------------ 151
+P SFAR+MSGQGFDTWILEVRGAGLS H + D M
Sbjct: 88 APGCSFARHMSGQGFDTWILEVRGAGLSLQEPNLKEIEHSAKVKSDKMEAASEIKINGTS 147
Query: 152 --------ITSANAKS-------------------TGGTTLSRESQSKSQLMETVMQSSQ 184
I S AKS G TT+ ES S+L ET M+ S+
Sbjct: 148 KEVKESTKILSDLAKSDSCINGKESASSMVEEEDFIGITTIWDESSLVSELTETFMRLSE 207
Query: 185 RLSGLLNEGEDP-----------------------------------------DAPQFFD 203
RLSG L+EG+ A Q D
Sbjct: 208 RLSGFLSEGQSRIMSAKLFDQISKLLVDSQLSERFNEVRGRLSNLLETGQTSVIAGQIRD 267
Query: 204 LQERL----------------------STSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVM 241
L +RL S++++DFQKQLDLIVK DWDFDHYL EDVPA +
Sbjct: 268 LSQRLVEIIDDGQRSVSPPLFNLQDRFSSTIDDFQKQLDLIVKYDWDFDHYLLEDVPAAI 327
Query: 242 EYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSL 301
+YIR +SKP+DGKLLA+GHSMGGILLYA LS CG EG+D FA++ TLASSLDY PS S
Sbjct: 328 DYIRDVSKPRDGKLLAIGHSMGGILLYAELSRCGCEGRDPRFAAIVTLASSLDYTPSKSA 387
Query: 302 LRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKL 361
L+LLLPL+DP QALNVPV+PLG L+A +P +S PYV SWL LISA DMMHPE+ +KL
Sbjct: 388 LKLLLPLADPAQALNVPVVPLGALLSASYPLSSRSPYVFSWLNNLISAEDMMHPEMLKKL 447
Query: 362 IFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEA 421
+ +NF IP KL+ QLTT F+EGGL DRS TFFYKDHI K NVPVLA+A DQDLICP A
Sbjct: 448 VLNNFCTIPAKLVLQLTTAFREGGLRDRSNTFFYKDHIHKCNVPVLAIAGDQDLICPPVA 507
Query: 422 VYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474
V ET KLIP+HLV++K FGEP GPHYAHYDLVG RLA QVYPCIIEF+++HD
Sbjct: 508 VEETAKLIPQHLVTYKCFGEPEGPHYAHYDLVGGRLAVEQVYPCIIEFISQHD 560
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224118770|ref|XP_002317901.1| predicted protein [Populus trichocarpa] gi|222858574|gb|EEE96121.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 283/470 (60%), Positives = 337/470 (71%), Gaps = 26/470 (5%)
Query: 9 GAVLHINNPAGSNPSPRVRVRVPVVPLRALYAHRGVTEKKPSNVVRNKPKRKICTADELH 68
A+ H+ N A S+P P + +R+ +G+ K N +N K CTADELH
Sbjct: 18 AALYHLKNSAPSDPRPNI-LRIGSSARNITRPGKGLAVTK--NAEKNNKKPDACTADELH 74
Query: 69 YVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFD 128
YV V +S+W+LALWRYLPSP A RNHPLLLLSG+GTNAIGYDLSPE SFAR MS QGFD
Sbjct: 75 YVTVSDSEWKLALWRYLPSPKAKPRNHPLLLLSGVGTNAIGYDLSPESSFARSMSNQGFD 134
Query: 129 TWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSG 188
TW LEVRG GLSA + GE +A +E + ++ +
Sbjct: 135 TWTLEVRGTGLSALVGDHGEGKQPLNA--------------------IEAELNFTRIVQK 174
Query: 189 LLN--EGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRT 246
L+N EG+ APQ F E ST+LE F KQLDLI K DWDFDHYL++D+PAV+ YIRT
Sbjct: 175 LVNIIEGQRSVAPQIFGFSENFSTALEKFLKQLDLIEKYDWDFDHYLKDDLPAVIGYIRT 234
Query: 247 LSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLL 306
+PKDGKL A+GHSMGGILLYA+LS C F+G DSG ASV TL SSLDY S S L+LLL
Sbjct: 235 ECRPKDGKLHAIGHSMGGILLYALLSRCCFQGMDSGLASVVTLGSSLDYTSSKSSLKLLL 294
Query: 307 PLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNF 366
P++DP +A+NVPVIPLG L+A+H FAS PPYVLSWL ISAP MMHPEL EKL+ +NF
Sbjct: 295 PVADPAKAVNVPVIPLGVLLSAVHTFASRPPYVLSWLNHQISAPGMMHPELLEKLVLNNF 354
Query: 367 GNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETV 426
+P KL+ QLTT F+EGGL DRSG+F YKDH+G+TNVPVLA+A DQDLICP EAVYETV
Sbjct: 355 CTVPAKLLLQLTTAFEEGGLRDRSGSFLYKDHLGETNVPVLAIAGDQDLICPPEAVYETV 414
Query: 427 KLIPEHLVSFKVFGEPRGPHYAHYDLV-GSRLAAYQVYPCIIEFLTRHDM 475
K+IP+HLV+++VFGEP GPHYAHYDLV G RLA QVYPCII FL +HD+
Sbjct: 415 KVIPKHLVTYRVFGEPSGPHYAHYDLVGGGRLAVSQVYPCIINFLIQHDI 464
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356534346|ref|XP_003535717.1| PREDICTED: uncharacterized protein LOC100776497 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 288/538 (53%), Positives = 344/538 (63%), Gaps = 115/538 (21%)
Query: 50 SNVVRNKPKRKICTADELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIG 109
S V +KP +CTADELHYV++ NSDW+LALWRY PSP AP RNHPLLLLSG+GTNAIG
Sbjct: 45 STAVADKPS--VCTADELHYVSLSNSDWKLALWRYNPSPLAPPRNHPLLLLSGVGTNAIG 102
Query: 110 YDLSPEYSFARYMSGQGFDTWILEVRGAGLS-----AHRVEFGEDSM-----ITSANAKS 159
YDLSPE SFARYMS QGF+TWILEVRGAGLS + +E ++M S +A +
Sbjct: 103 YDLSPESSFARYMSSQGFETWILEVRGAGLSVQGSNSKDIEQSANAMSEKMEAASESATA 162
Query: 160 TGGTTLSR----------------------------------------ESQSKSQLMETV 179
T G S ES+ ++L ET+
Sbjct: 163 TNGAVASNKELNNIYCAVSEPEISTPNGVETENVAIKGDLTRLGTVWDESKLVARLTETL 222
Query: 180 MQSSQRLSGLLNEGEDP---------------DAP---QFFDLQERLST----------- 210
M S+R+SG L+E + D+P Q+ +++E+LST
Sbjct: 223 MFLSERVSGFLSESQSRVMFAKFLDQISKLLVDSPLYEQYNEVREKLSTLFETKQNAGIT 282
Query: 211 ----------------------------------SLEDFQKQLDLIVKNDWDFDHYLEED 236
++EDFQKQLDL+VK DWDFDHY+EED
Sbjct: 283 SQITDLSQKLVNIIEEGQLSVSPQLFDLQARFTSTIEDFQKQLDLMVKYDWDFDHYMEED 342
Query: 237 VPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296
VPA +EYI S PKDGKLLA+GHSMGGILLY+MLS GFEGKDS A+V TLASSLDY
Sbjct: 343 VPAAIEYIMKQSMPKDGKLLAIGHSMGGILLYSMLSRFGFEGKDSNLAAVVTLASSLDYT 402
Query: 297 PSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPE 356
S S L+LLLPL+DP QALNVPV+PLG LAA +P +S PPYV SWL LISA DMM P+
Sbjct: 403 SSKSTLKLLLPLADPAQALNVPVVPLGAMLAAAYPLSSRPPYVFSWLNTLISAEDMMDPD 462
Query: 357 LFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLI 416
L ++L+ +NF IP KL+ QLTT F+E GLC+R+GTFFYKDH+ K N+P+LA+A DQDLI
Sbjct: 463 LLKRLVLNNFCTIPAKLVLQLTTAFRERGLCNRNGTFFYKDHLHKNNIPILAIAGDQDLI 522
Query: 417 CPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474
CP EAV ETVKLIPEHLV++KVFGEP G HYAHYDLVG RLA QVYPCIIEFL+ HD
Sbjct: 523 CPPEAVEETVKLIPEHLVTYKVFGEPEGSHYAHYDLVGGRLAVEQVYPCIIEFLSCHD 580
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356574234|ref|XP_003555255.1| PREDICTED: uncharacterized protein LOC100793924 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 286/526 (54%), Positives = 343/526 (65%), Gaps = 103/526 (19%)
Query: 50 SNVVRNKPKRKICTADELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIG 109
S +KP +CTADELHYV++ NSDW+LALWRY PSP AP RNHPLLLLSG+GTNA+G
Sbjct: 42 STAFADKPS--VCTADELHYVSLSNSDWKLALWRYHPSPLAPPRNHPLLLLSGVGTNAVG 99
Query: 110 YDLSPEYSFARYMSGQGFDTWILEVRGAGLS-----AHRVEFGEDSM------------- 151
YDLSPE SFARYMSGQGF+TWILEVRGAGLS + +E ++M
Sbjct: 100 YDLSPESSFARYMSGQGFETWILEVRGAGLSIQGSNSKDIEQSANAMSEKMKAASEKLNN 159
Query: 152 ----------ITSANAKSTGGT----------TLSRESQSKSQLMETVMQSSQRLSGLLN 191
I++ N T T+ ES+ ++L ET+M S+R+SG L+
Sbjct: 160 VSFCAVSEPEISAPNGVETENVAIQGDLTRLGTVWDESKLVARLTETLMFLSERVSGFLS 219
Query: 192 EGEDP---------------DAP---QFFDLQERLST----------------------- 210
E + D+P QF +++ +LST
Sbjct: 220 ESQSRVMFTKFLDQISKLLVDSPLYEQFNEVRGKLSTLFETKQNTGITSQITDLSQKLVN 279
Query: 211 ----------------------SLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLS 248
++EDFQKQLDL+VK DWDFDHYLEEDVPA +EYI S
Sbjct: 280 IIEEGQLSVSPPLFDLQARFTSTIEDFQKQLDLMVKYDWDFDHYLEEDVPAAIEYIMKQS 339
Query: 249 KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPL 308
PKDGKLLA+GHSMGGILLY+MLS GFEGK+S A+V TLASSLDY S S L+LLLPL
Sbjct: 340 MPKDGKLLAIGHSMGGILLYSMLSRFGFEGKESNLAAVVTLASSLDYTSSKSTLKLLLPL 399
Query: 309 SDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGN 368
+DP QALNVPV+PLG LAA +P +S PPYV SWL LISA DMM P+L ++L+ +NF
Sbjct: 400 ADPAQALNVPVVPLGAMLAAAYPLSSRPPYVFSWLNTLISAEDMMDPDLLKRLVLNNFCT 459
Query: 369 IPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKL 428
IP KL+ QLTT F+E GLC+R+GTFFYKDH+ K+N P+LA+A DQDLICP EAV ETVKL
Sbjct: 460 IPAKLVLQLTTAFRERGLCNRNGTFFYKDHLHKSNTPILAIAGDQDLICPPEAVEETVKL 519
Query: 429 IPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474
IPEHLV++KVFGEP G HYAHYDLVG RLA QVYPCIIEFL+ HD
Sbjct: 520 IPEHLVTYKVFGEPGGSHYAHYDLVGGRLAVEQVYPCIIEFLSCHD 565
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 476 | ||||||
| TAIR|locus:2196179 | 578 | AT1G15060 [Arabidopsis thalian | 0.644 | 0.531 | 0.625 | 7.8e-144 | |
| TAIR|locus:2027784 | 452 | AT1G73750 "AT1G73750" [Arabido | 0.623 | 0.657 | 0.543 | 2e-86 | |
| UNIPROTKB|Q4KFJ4 | 329 | PFL_1870 "Uncharacterized prot | 0.153 | 0.221 | 0.32 | 4.8e-05 | |
| DICTYBASE|DDB_G0268966 | 414 | lip1 "lipase family member 1" | 0.147 | 0.169 | 0.312 | 0.00029 |
| TAIR|locus:2196179 AT1G15060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1025 (365.9 bits), Expect = 7.8e-144, Sum P(2) = 7.8e-144
Identities = 192/307 (62%), Positives = 232/307 (75%)
Query: 168 ESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227
ES+ S L+ V +QRL L ++G+ +P DLQERL+ ++EDFQKQLDLIVK DW
Sbjct: 270 ESKQNSGLVNQVRDLAQRLVNLFDDGQRSVSPPLIDLQERLTATIEDFQKQLDLIVKYDW 329
Query: 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVT 287
DFDHYLEEDVPA +EY+R SKPKDGKL A+GHSMGGILLYAMLS C FEG++ A+V
Sbjct: 330 DFDHYLEEDVPAAIEYVRAQSKPKDGKLFAIGHSMGGILLYAMLSRCAFEGREPSVAAVA 389
Query: 288 TLASSLDYXXXXXXXXXXXXXXDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLI 347
TLASS+DY +P +AL+VPV+PLG LAA P ++ PPYVLSWL LI
Sbjct: 390 TLASSVDYTTSNSALKLLIPLANPAEALSVPVVPLGALLAAAFPLSTRPPYVLSWLNDLI 449
Query: 348 SAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVL 407
S+ DMMHPE+ EKL+ +NF IP KL+ QLTT F+EGGL DRSG F+YKDH+ +T+VPVL
Sbjct: 450 SSTDMMHPEMLEKLVLNNFCTIPAKLLIQLTTAFREGGLRDRSGKFYYKDHLPRTSVPVL 509
Query: 408 ALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCII 467
ALA D+DLICP AV +TVKL PE+LV++K+ GEP GPHYAHYDLVG RLA QVYPCI
Sbjct: 510 ALAGDRDLICPPAAVEDTVKLFPENLVTYKLLGEPDGPHYAHYDLVGGRLAVEQVYPCIT 569
Query: 468 EFLTRHD 474
EFL+ HD
Sbjct: 570 EFLSHHD 576
|
|
| TAIR|locus:2027784 AT1G73750 "AT1G73750" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
Identities = 164/302 (54%), Positives = 207/302 (68%)
Query: 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232
S L+E + S+RL +L+ G + +Q+RLS DF+++ +LI +WDFD+Y
Sbjct: 154 SNLLENFISVSERLENVLDGGS-----KILGMQDRLSKRAGDFKQRFELIPHYNWDFDNY 208
Query: 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292
LEEDVP+ M+Y+RT +K KDGKLLAVGHSMGGILLYA+LS CGF+G DSG A VTTLAS+
Sbjct: 209 LEEDVPSAMDYVRTQTKSKDGKLLAVGHSMGGILLYALLSRCGFKGMDSGLAGVTTLAST 268
Query: 293 LDYXXXXXXXXXXXXXXDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDM 352
DY +P QA+N+P++P+ T LA HP PPY LSWL ISAP M
Sbjct: 269 FDYSSSGTLLKYLLPMKEPAQAINLPIMPIDTMLAMAHPLMCRPPYSLSWLTANISAPQM 328
Query: 353 MHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAAD 412
M PE+ EKL+ ++ +P KL+ QLTT GGL DR+GTF YKDHI KTNVP+LALA D
Sbjct: 329 MDPEVIEKLVLNSLCTVPVKLLLQLTTAVDHGGLRDRTGTFCYKDHISKTNVPILALAGD 388
Query: 413 QDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472
D+ICP +AVY+TVKLIPEHL ++KV G P GPHY H DL+ R A +VYP I FL +
Sbjct: 389 WDIICPPDAVYDTVKLIPEHLATYKVVGSPGGPHYGHQDLISGRTARNEVYPLITRFLQQ 448
Query: 473 HD 474
D
Sbjct: 449 QD 450
|
|
| UNIPROTKB|Q4KFJ4 PFL_1870 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 87 (35.7 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPE-YSFARYMSGQGFDTWI 131
P+ LA+ R + R P++LL G +N + SP+ Y++ GFD WI
Sbjct: 34 PDPSVELAVTRLGLADEPEARGIPVVLLHGSFSNR-RFWYSPKGIGLGAYLARAGFDVWI 92
Query: 132 LEVRGAGLSAHRVEF 146
E+RG GLS ++
Sbjct: 93 PEMRGHGLSRRNADY 107
|
|
| DICTYBASE|DDB_G0268966 lip1 "lipase family member 1" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 79 (32.9 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 396 KDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPE--HLVSFKVFGEPRGPHYAHYDLV 453
K I + N PV+A + QD + + V LIP+ LV +K P Y+H D V
Sbjct: 339 KYDITQFNTPVIAFSGGQDFLADPDDV---AWLIPQLKSLVYYKNL-----PTYSHLDFV 390
Query: 454 GSRLAAYQVYPCIIEFLTRH 473
A VY ++ +LT++
Sbjct: 391 WGETAYIDVYADVVTYLTKY 410
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 476 | |||
| COG3243 | 445 | COG3243, PhaC, Poly(3-hydroxyalkanoate) synthetase | 1e-06 |
| >gnl|CDD|225783 COG3243, PhaC, Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 23/214 (10%)
Query: 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASV 286
+ + Y+ E + ++ ++ ++ KD + +G+ +GG LL A L+ S+
Sbjct: 157 KNLEDYILEGLSEAIDTVKDITGQKD--INLIGYCVGGTLLAAALAL----MAAKRIKSL 210
Query: 287 TTLASSLDYRPSNSLLRLLLPLSDPIQAL-----NVPVIPLGTFLAAIHPFASSPPYVLS 341
T L S +D+ + L + I+AL ++P G ++A + F P L
Sbjct: 211 TLLTSPVDFSHAGDL--GIFANEATIEALDADIVQKGILP-GWYMAIV--FFLLRPNDLI 265
Query: 342 WLKFLISAPDMMHPELFEKLIFSNFG-NIPTKLISQ-LTTVFQEGGLCDRSGTFFYKDHI 399
W F+ + D P F+ L ++ +P S+ L + E L G +
Sbjct: 266 WNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRL--IRGGLEVSGTM 323
Query: 400 ---GKTNVPVLALAADQDLICPTEAVYETVKLIP 430
G PV LAA++D I P +VY +L+
Sbjct: 324 VDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLG 357
|
Length = 445 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 476 | |||
| PLN02872 | 395 | triacylglycerol lipase | 100.0 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 100.0 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.94 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.94 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.94 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.94 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.94 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.93 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.93 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.93 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.92 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.92 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.92 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.92 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.92 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.91 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.91 | |
| PLN02578 | 354 | hydrolase | 99.9 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.9 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.9 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.9 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.9 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.89 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.89 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.89 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.89 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.89 | |
| PLN02511 | 388 | hydrolase | 99.88 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.88 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.88 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.88 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.88 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.88 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.87 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.87 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.87 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.87 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.87 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.86 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.86 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.86 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.85 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.85 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.85 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.85 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.85 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.84 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.84 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.83 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.83 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.83 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.83 | |
| PRK10566 | 249 | esterase; Provisional | 99.82 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.82 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.81 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.8 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.79 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.79 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.78 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.78 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.74 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.73 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.72 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.72 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.7 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.7 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.69 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.68 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.68 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.66 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.64 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.63 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.62 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.6 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.59 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.59 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.58 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.57 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.57 | |
| PLN00021 | 313 | chlorophyllase | 99.57 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.57 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.57 | |
| PRK10115 | 686 | protease 2; Provisional | 99.51 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.5 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.49 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.48 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.46 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.44 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.39 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.37 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.35 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.34 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.31 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.26 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.21 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.2 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.19 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.17 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.15 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.15 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.07 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 99.06 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.05 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 99.05 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 99.02 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.02 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 98.99 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 98.98 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 98.98 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 98.96 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.94 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.93 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 98.91 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 98.85 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.85 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 98.82 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 98.81 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 98.81 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.79 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.78 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.77 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 98.77 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 98.72 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 98.69 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 98.69 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 98.65 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.63 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 98.6 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.49 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 98.44 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.42 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 98.39 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 98.38 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.36 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 98.33 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.3 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 98.25 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.23 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 98.21 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 98.17 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 98.08 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.07 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 98.07 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.06 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 98.05 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 98.04 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.02 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 98.0 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.0 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 97.96 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 97.84 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 97.79 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 97.79 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 97.78 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 97.72 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 97.71 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 97.65 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 97.64 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 97.58 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 97.54 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 97.5 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 97.45 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 97.44 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 97.35 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 97.32 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 97.28 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 97.28 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 97.24 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 97.18 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 97.1 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 97.1 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 97.06 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 97.06 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 97.01 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 97.0 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 96.98 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 96.92 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 96.91 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 96.91 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 96.85 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 96.84 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 96.78 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 96.63 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 96.48 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 96.15 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 96.14 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 95.94 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 95.91 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 95.85 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 95.78 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 95.39 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 95.13 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 95.01 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 94.99 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 94.3 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 94.29 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 94.28 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 93.96 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 93.89 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 93.82 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 93.08 | |
| PLN02454 | 414 | triacylglycerol lipase | 92.42 | |
| PLN02209 | 437 | serine carboxypeptidase | 92.21 | |
| PLN02408 | 365 | phospholipase A1 | 92.02 | |
| PLN02162 | 475 | triacylglycerol lipase | 91.93 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 91.56 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 91.33 | |
| PLN00413 | 479 | triacylglycerol lipase | 91.28 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 91.19 | |
| PLN02571 | 413 | triacylglycerol lipase | 90.92 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 90.08 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 89.93 | |
| PLN02324 | 415 | triacylglycerol lipase | 89.67 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 89.12 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 89.05 | |
| PLN02802 | 509 | triacylglycerol lipase | 88.73 | |
| PLN02761 | 527 | lipase class 3 family protein | 87.87 | |
| PLN02310 | 405 | triacylglycerol lipase | 87.67 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 87.59 | |
| PLN02934 | 515 | triacylglycerol lipase | 87.49 | |
| PLN02753 | 531 | triacylglycerol lipase | 86.45 | |
| PLN02719 | 518 | triacylglycerol lipase | 84.98 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 84.6 | |
| PLN02847 | 633 | triacylglycerol lipase | 82.95 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 81.63 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 81.61 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 81.61 |
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-32 Score=281.62 Aligned_cols=329 Identities=19% Similarity=0.234 Sum_probs=243.5
Q ss_pred CCCCceeeEeeCCCceEEEEEEEcCCCC--CCCCCCcEEEecCCCCCcceeec-CCCCCHHHHHHhCCCcEEEecCCCCC
Q 011833 62 CTADELHYVAVPNSDWRLALWRYLPSPA--APQRNHPLLLLSGIGTNAIGYDL-SPEYSFARYMSGQGFDTWILEVRGAG 138 (476)
Q Consensus 62 ~~~~e~~~v~~~~dG~~L~~~~~~p~~~--~~~~~~~VlllHG~~~~~~~~~~-~~~~~l~~~L~~~Gy~V~~~D~rG~G 138 (476)
..+.|+|.|+ |+||+.|.++++++... ....+++|||+||++.++..|.. .+..+++..|+++||+||++|+||+|
T Consensus 41 gy~~e~h~v~-T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~ 119 (395)
T PLN02872 41 GYSCTEHTIQ-TKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTR 119 (395)
T ss_pred CCCceEEEEE-CCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccc
Confidence 4667899998 89999999999964322 12347899999999999999974 45678889999999999999999999
Q ss_pred CcccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhh
Q 011833 139 LSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQ 218 (476)
Q Consensus 139 ~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (476)
.|.++.... +.-
T Consensus 120 ~s~gh~~~~--------------------------------------------------------------~~~------ 131 (395)
T PLN02872 120 WSYGHVTLS--------------------------------------------------------------EKD------ 131 (395)
T ss_pred cccCCCCCC--------------------------------------------------------------ccc------
Confidence 886544211 000
Q ss_pred hhcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCC
Q 011833 219 LDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPS 298 (476)
Q Consensus 219 ~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~ 298 (476)
...|+|+|++++.+|++++++++.+..+ +++++|||||||.+++.++ .+| +...+|+.+++++|...+...
T Consensus 132 ---~~fw~~s~~e~a~~Dl~a~id~i~~~~~---~~v~~VGhS~Gg~~~~~~~-~~p--~~~~~v~~~~~l~P~~~~~~~ 202 (395)
T PLN02872 132 ---KEFWDWSWQELALYDLAEMIHYVYSITN---SKIFIVGHSQGTIMSLAAL-TQP--NVVEMVEAAALLCPISYLDHV 202 (395)
T ss_pred ---hhccCCcHHHHHHHHHHHHHHHHHhccC---CceEEEEECHHHHHHHHHh-hCh--HHHHHHHHHHHhcchhhhccC
Confidence 0137899999999999999999987643 4899999999999998666 455 112469999999998765443
Q ss_pred hhh-HHHhhc-Ccc-hhhhcc-CCcCChHHHHHhhccCCCCchHHHHHHHHhhc-CCCCCCHHHHHHHhhhccCCCCHHH
Q 011833 299 NSL-LRLLLP-LSD-PIQALN-VPVIPLGTFLAAIHPFASSPPYVLSWLKFLIS-APDMMHPELFEKLIFSNFGNIPTKL 373 (476)
Q Consensus 299 ~~~-~~~~~~-~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (476)
.+. .+.+.. ... ....++ .++++...++..+...+|.....|..+...+. ....++...+..+..+.+.+.+.++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~ 282 (395)
T PLN02872 203 TAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSVKN 282 (395)
T ss_pred CCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchHHH
Confidence 332 222221 111 111122 23455565666555555543333444333333 2345788889999999899999999
Q ss_pred HHHHHHHHHhCCccccC-Cc----ccccc------cCCCC--cccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEec
Q 011833 374 ISQLTTVFQEGGLCDRS-GT----FFYKD------HIGKT--NVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFG 440 (476)
Q Consensus 374 ~~~~~~~~~~~~~~~~~-g~----~~~~~------~l~~i--~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~ 440 (476)
+.+|.+++..+.++.+| |. ..|.. .+.++ ++|+++++|++|.+++++.++++.+.+++. ..++.+
T Consensus 283 ~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~-~~l~~l- 360 (395)
T PLN02872 283 LRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSK-PELLYL- 360 (395)
T ss_pred HHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCc-cEEEEc-
Confidence 99999999999999877 31 12322 56777 589999999999999999999999999874 356665
Q ss_pred CCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 441 EPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 441 ~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
++++|.+++++.++++++++.|++||+++.
T Consensus 361 ----~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 361 ----ENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred ----CCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 899999999999999999999999999764
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-32 Score=278.63 Aligned_cols=330 Identities=23% Similarity=0.316 Sum_probs=258.1
Q ss_pred CCCCCceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeec-CCCCCHHHHHHhCCCcEEEecCCCCCC
Q 011833 61 ICTADELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDL-SPEYSFARYMSGQGFDTWILEVRGAGL 139 (476)
Q Consensus 61 ~~~~~e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~-~~~~~l~~~L~~~Gy~V~~~D~rG~G~ 139 (476)
...+.|+|.|+ |.||+.|.++|++.+. +++|||+|+||+.+++..|.. .|..+++..|+++||+||+.+.||..+
T Consensus 44 ~gy~~E~h~V~-T~DgYiL~lhRIp~~~---~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~y 119 (403)
T KOG2624|consen 44 YGYPVEEHEVT-TEDGYILTLHRIPRGK---KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTY 119 (403)
T ss_pred cCCceEEEEEE-ccCCeEEEEeeecCCC---CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCccc
Confidence 34667999998 8999999999996554 578999999999999999995 689999999999999999999999999
Q ss_pred cccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhh
Q 011833 140 SAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQL 219 (476)
Q Consensus 140 S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (476)
|.++..+. ++.
T Consensus 120 Sr~h~~l~--------------------------------------------------------------~~~------- 130 (403)
T KOG2624|consen 120 SRKHKKLS--------------------------------------------------------------PSS------- 130 (403)
T ss_pred chhhcccC--------------------------------------------------------------CcC-------
Confidence 98776532 210
Q ss_pred hcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCC-CCCCcccccEEEEecccccccCC
Q 011833 220 DLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCG-FEGKDSGFASVTTLASSLDYRPS 298 (476)
Q Consensus 220 ~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p-~~~~~~~v~~lvlla~~~~~~~~ 298 (476)
..+.|+|+|+++..+|++|.|+++.+.++.. ++++||||+|+.+.+.+++..| ++ .+|+.+++++|...+...
T Consensus 131 -~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~--kl~yvGHSQGtt~~fv~lS~~p~~~---~kI~~~~aLAP~~~~k~~ 204 (403)
T KOG2624|consen 131 -DKEFWDFSWHEMGTYDLPAMIDYILEKTGQE--KLHYVGHSQGTTTFFVMLSERPEYN---KKIKSFIALAPAAFPKHI 204 (403)
T ss_pred -CcceeecchhhhhhcCHHHHHHHHHHhcccc--ceEEEEEEccchhheehhcccchhh---hhhheeeeecchhhhccc
Confidence 1125899999999999999999999999876 9999999999999999999887 34 679999999999865533
Q ss_pred hhhHH-HhhcCcchhh----hc-cCCcCChHHHHHhhccCCCCch----HHHHHHHHhhcC--CCCCCHHHHHHHhhhcc
Q 011833 299 NSLLR-LLLPLSDPIQ----AL-NVPVIPLGTFLAAIHPFASSPP----YVLSWLKFLISA--PDMMHPELFEKLIFSNF 366 (476)
Q Consensus 299 ~~~~~-~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 366 (476)
.+... .+..+..... .+ ..+++|...+++.+...+|... .+|......+.. ..+++......++.+.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~p 284 (403)
T KOG2624|consen 205 KSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHLP 284 (403)
T ss_pred ccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccCC
Confidence 33322 2222111111 11 2357788877777777667643 344444444433 22555566667788888
Q ss_pred CCCCHHHHHHHHHHHHhCCccccC-Cc----ccccc------cCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCcee
Q 011833 367 GNIPTKLISQLTTVFQEGGLCDRS-GT----FFYKD------HIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVS 435 (476)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~-g~----~~~~~------~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~ 435 (476)
.+++.+++.+|.|++..+.++.++ |. ..|.. .+.++++||.+.+|++|.++.++++..+....++..+.
T Consensus 285 agtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~~ 364 (403)
T KOG2624|consen 285 AGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVIK 364 (403)
T ss_pred CCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhccccccc
Confidence 899999999999999999999887 32 12322 67789999999999999999999999999888876553
Q ss_pred EEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 436 FKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 436 ~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
..+ ..+++.|+|++++.++++++++.|++.++..
T Consensus 365 ~~~----~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 365 YIV----PIPEYNHLDFIWGLDAKEEVYDPVIERLRLF 398 (403)
T ss_pred ccc----cCCCccceeeeeccCcHHHHHHHHHHHHHhh
Confidence 333 2389999999999999999999999999864
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.6e-26 Score=232.57 Aligned_cols=274 Identities=15% Similarity=0.185 Sum_probs=168.8
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcce-eecCCCCCHHHHHHhCCCcEEEecCCCCCCccccccc
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIG-YDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEF 146 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~-~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~ 146 (476)
.+.. +.||.+|.+..|.|... ..+++|||+||++++... | ..++..|+++||+|+++|+||||.|++...
T Consensus 64 ~~~~-~~~g~~l~~~~~~p~~~--~~~~~iv~lHG~~~~~~~~~-----~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~- 134 (349)
T PLN02385 64 SYEV-NSRGVEIFSKSWLPENS--RPKAAVCFCHGYGDTCTFFF-----EGIARKIASSGYGVFAMDYPGFGLSEGLHG- 134 (349)
T ss_pred eeEE-cCCCCEEEEEEEecCCC--CCCeEEEEECCCCCccchHH-----HHHHHHHHhCCCEEEEecCCCCCCCCCCCC-
Confidence 3444 68999999999877532 346899999999888654 4 478889998999999999999999965321
Q ss_pred CccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccC
Q 011833 147 GEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKND 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
..
T Consensus 135 ------------------------------------------------------------------------------~~ 136 (349)
T PLN02385 135 ------------------------------------------------------------------------------YI 136 (349)
T ss_pred ------------------------------------------------------------------------------Cc
Confidence 01
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhh
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLL 306 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~ 306 (476)
.++++++ +|+.++++.+......+..+++++||||||.+++.++.++| .+|+++|+++|.............+.
T Consensus 137 ~~~~~~~-~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p-----~~v~glVLi~p~~~~~~~~~~~~~~~ 210 (349)
T PLN02385 137 PSFDDLV-DDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQP-----NAWDGAILVAPMCKIADDVVPPPLVL 210 (349)
T ss_pred CCHHHHH-HHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCc-----chhhheeEecccccccccccCchHHH
Confidence 3455555 78888888876543223347999999999999999999987 78999999998654322100000000
Q ss_pred cCcchhhhccCCcCChHHHHHhhccCC---CCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccC-CCCHHHHHHHHHHHH
Q 011833 307 PLSDPIQALNVPVIPLGTFLAAIHPFA---SSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFG-NIPTKLISQLTTVFQ 382 (476)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 382 (476)
.+. ..+....+.. ....+. . ..... ........+...... ........ .++.
T Consensus 211 ~~~--------------~~~~~~~p~~~~~~~~~~~-~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~l~ 266 (349)
T PLN02385 211 QIL--------------ILLANLLPKAKLVPQKDLA-E---LAFRD---LKKRKMAEYNVIAYKDKPRLRTAV---ELLR 266 (349)
T ss_pred HHH--------------HHHHHHCCCceecCCCccc-c---ccccC---HHHHHHhhcCcceeCCCcchHHHH---HHHH
Confidence 000 0000000000 000000 0 00000 000000000000000 00111111 1111
Q ss_pred hCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccc-
Q 011833 383 EGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQ- 461 (476)
Q Consensus 383 ~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~- 461 (476)
.. ......+.++++|+|+|+|++|.++|++.++.+++.++..+++++++ +++||..+ .+.+++
T Consensus 267 ~~--------~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i-----~~~gH~l~---~e~p~~~ 330 (349)
T PLN02385 267 TT--------QEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLY-----EDAYHSIL---EGEPDEM 330 (349)
T ss_pred HH--------HHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEe-----CCCeeecc---cCCChhh
Confidence 00 11123577899999999999999999999999999986555678887 89999543 455554
Q ss_pred ---hhHHHHHHHHhhc
Q 011833 462 ---VYPCIIEFLTRHD 474 (476)
Q Consensus 462 ---v~~~i~~fL~~~~ 474 (476)
|++.|++||+++.
T Consensus 331 ~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 331 IFQVLDDIISWLDSHS 346 (349)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999874
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=221.86 Aligned_cols=266 Identities=16% Similarity=0.131 Sum_probs=166.5
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
..||.+|.+..|.|.. ..++.||++||+++++..| ..+++.|++.||.|+++|+||||.|++...
T Consensus 7 ~~~g~~l~~~~~~~~~---~~~~~v~llHG~~~~~~~~-----~~~~~~l~~~g~~via~D~~G~G~S~~~~~------- 71 (276)
T PHA02857 7 NLDNDYIYCKYWKPIT---YPKALVFISHGAGEHSGRY-----EELAENISSLGILVFSHDHIGHGRSNGEKM------- 71 (276)
T ss_pred cCCCCEEEEEeccCCC---CCCEEEEEeCCCccccchH-----HHHHHHHHhCCCEEEEccCCCCCCCCCccC-------
Confidence 5799999999997752 3457788889999999999 689999999999999999999999964211
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
+ ..++.++
T Consensus 72 ----------------------------------------------------------~--------------~~~~~~~ 79 (276)
T PHA02857 72 ----------------------------------------------------------M--------------IDDFGVY 79 (276)
T ss_pred ----------------------------------------------------------C--------------cCCHHHH
Confidence 0 0123344
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchh
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPI 312 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~ 312 (476)
+ +|+...++++++... ..+++++||||||.+++.++.++| +.|+++|+++|....... .....+.
T Consensus 80 ~-~d~~~~l~~~~~~~~--~~~~~lvG~S~GG~ia~~~a~~~p-----~~i~~lil~~p~~~~~~~-~~~~~~~------ 144 (276)
T PHA02857 80 V-RDVVQHVVTIKSTYP--GVPVFLLGHSMGATISILAAYKNP-----NLFTAMILMSPLVNAEAV-PRLNLLA------ 144 (276)
T ss_pred H-HHHHHHHHHHHhhCC--CCCEEEEEcCchHHHHHHHHHhCc-----cccceEEEeccccccccc-cHHHHHH------
Confidence 4 688888887766543 248999999999999999999887 789999999986542211 0001000
Q ss_pred hhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccC---CCCHHHHHHHHHHHHhCCcccc
Q 011833 313 QALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFG---NIPTKLISQLTTVFQEGGLCDR 389 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 389 (476)
........+..........++ . . +.+....+..+... ........+.....
T Consensus 145 ----------~~~~~~~~~~~~~~~~~~~~~----~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 198 (276)
T PHA02857 145 ----------AKLMGIFYPNKIVGKLCPESV----S--R--DMDEVYKYQYDPLVNHEKIKAGFASQVLKAT-------- 198 (276)
T ss_pred ----------HHHHHHhCCCCccCCCCHhhc----c--C--CHHHHHHHhcCCCccCCCccHHHHHHHHHHH--------
Confidence 000000000000000000000 0 0 00000111110000 00110111110000
Q ss_pred CCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHH
Q 011833 390 SGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEF 469 (476)
Q Consensus 390 ~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~f 469 (476)
....+.+.++++|||+|+|++|.++|++.++++.+.+.. +++++++ +++||.......+..+++++.|++|
T Consensus 199 ---~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~-~~~~~~~-----~~~gH~~~~e~~~~~~~~~~~~~~~ 269 (276)
T PHA02857 199 ---NKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANC-NREIKIY-----EGAKHHLHKETDEVKKSVMKEIETW 269 (276)
T ss_pred ---HHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccC-CceEEEe-----CCCcccccCCchhHHHHHHHHHHHH
Confidence 011236788999999999999999999999999998854 4578877 8999955432233367899999999
Q ss_pred HHhhcC
Q 011833 470 LTRHDM 475 (476)
Q Consensus 470 L~~~~~ 475 (476)
|+++..
T Consensus 270 l~~~~~ 275 (276)
T PHA02857 270 IFNRVK 275 (276)
T ss_pred HHHhcc
Confidence 998743
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=223.29 Aligned_cols=282 Identities=17% Similarity=0.159 Sum_probs=169.4
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccccc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEF 146 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~ 146 (476)
..++.+ +|..+++....+ .+++|||+||+++++..| ..++..|++. |+|+++|+||||.|+.....
T Consensus 10 ~~~~~~--~~~~i~y~~~G~------~~~~vlllHG~~~~~~~w-----~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~ 75 (294)
T PLN02824 10 TRTWRW--KGYNIRYQRAGT------SGPALVLVHGFGGNADHW-----RKNTPVLAKS-HRVYAIDLLGYGYSDKPNPR 75 (294)
T ss_pred CceEEE--cCeEEEEEEcCC------CCCeEEEECCCCCChhHH-----HHHHHHHHhC-CeEEEEcCCCCCCCCCCccc
Confidence 345655 898887766421 247999999999999999 6888999876 79999999999999753210
Q ss_pred CccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccC
Q 011833 147 GEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKND 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
. ......
T Consensus 76 ~-------------------------------------------------------------------------~~~~~~ 82 (294)
T PLN02824 76 S-------------------------------------------------------------------------APPNSF 82 (294)
T ss_pred c-------------------------------------------------------------------------cccccc
Confidence 0 000013
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCCh---hhHH
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSN---SLLR 303 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~---~~~~ 303 (476)
|++++++ +|+.++++.+ +. +++++|||||||.+++.++.++| ++|+++|++++........ ...+
T Consensus 83 ~~~~~~a-~~l~~~l~~l----~~--~~~~lvGhS~Gg~va~~~a~~~p-----~~v~~lili~~~~~~~~~~~~~~~~~ 150 (294)
T PLN02824 83 YTFETWG-EQLNDFCSDV----VG--DPAFVICNSVGGVVGLQAAVDAP-----ELVRGVMLINISLRGLHIKKQPWLGR 150 (294)
T ss_pred CCHHHHH-HHHHHHHHHh----cC--CCeEEEEeCHHHHHHHHHHHhCh-----hheeEEEEECCCcccccccccchhhh
Confidence 6777777 7888888765 22 48999999999999999999998 8999999999754211100 0000
Q ss_pred HhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHh
Q 011833 304 LLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQE 383 (476)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (476)
.+.... ...+. ........+........+...+..........+++.++.+..... .+ .....+..+...
T Consensus 151 ~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~ 220 (294)
T PLN02824 151 PFIKAF--QNLLR-----ETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGL--EP-GAVDVFLDFISY 220 (294)
T ss_pred HHHHHH--HHHHh-----chhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccC--Cc-hHHHHHHHHhcc
Confidence 000000 00000 000000000101111111111111122222233444433322111 11 111112222110
Q ss_pred CCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchh
Q 011833 384 GGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVY 463 (476)
Q Consensus 384 ~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~ 463 (476)
. ......+.+.++++|+|+|+|++|.++|.+.++.+.+.+++. +++++ +++||+. ..+.|+++.
T Consensus 221 ---~---~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~---~~e~p~~~~ 284 (294)
T PLN02824 221 ---S---GGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVE--DFIVL-----PGVGHCP---QDEAPELVN 284 (294)
T ss_pred ---c---cccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCcc--ceEEe-----CCCCCCh---hhhCHHHHH
Confidence 0 011112457889999999999999999999999988877654 56776 8999954 478899999
Q ss_pred HHHHHHHHhh
Q 011833 464 PCIIEFLTRH 473 (476)
Q Consensus 464 ~~i~~fL~~~ 473 (476)
+.|.+||+++
T Consensus 285 ~~i~~fl~~~ 294 (294)
T PLN02824 285 PLIESFVARH 294 (294)
T ss_pred HHHHHHHhcC
Confidence 9999999875
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.6e-25 Score=224.12 Aligned_cols=277 Identities=16% Similarity=0.205 Sum_probs=167.7
Q ss_pred eEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcc-eeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccC
Q 011833 69 YVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAI-GYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 69 ~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~-~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
++. +.||.+|.++.|.|...+ ..+++|||+||++.+.. .| ..++..|+++||+|+++|+||||.|.+...
T Consensus 36 ~~~-~~dg~~l~~~~~~~~~~~-~~~~~VvllHG~~~~~~~~~-----~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~-- 106 (330)
T PLN02298 36 FFT-SPRGLSLFTRSWLPSSSS-PPRALIFMVHGYGNDISWTF-----QSTAIFLAQMGFACFALDLEGHGRSEGLRA-- 106 (330)
T ss_pred eEE-cCCCCEEEEEEEecCCCC-CCceEEEEEcCCCCCcceeh-----hHHHHHHHhCCCEEEEecCCCCCCCCCccc--
Confidence 444 579999999888765321 24678999999987653 23 466788999999999999999999964221
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
...
T Consensus 107 -----------------------------------------------------------------------------~~~ 109 (330)
T PLN02298 107 -----------------------------------------------------------------------------YVP 109 (330)
T ss_pred -----------------------------------------------------------------------------cCC
Confidence 012
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLP 307 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~ 307 (476)
+++.++ +|+.++++++.........+++++||||||.+++.++..+| .+|+++|+++|................
T Consensus 110 ~~~~~~-~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~ 183 (330)
T PLN02298 110 NVDLVV-EDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANP-----EGFDGAVLVAPMCKISDKIRPPWPIPQ 183 (330)
T ss_pred CHHHHH-HHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCc-----ccceeEEEecccccCCcccCCchHHHH
Confidence 344555 89999999997654333347999999999999999999887 789999999987654321100000000
Q ss_pred CcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhc---cCCC-CHHHHHHHHHHHHh
Q 011833 308 LSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSN---FGNI-PTKLISQLTTVFQE 383 (476)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~ 383 (476)
...++....+.....+. ..++ . ..........+.... +... ....+.......
T Consensus 184 --------------~~~~~~~~~~~~~~~~~-~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 240 (330)
T PLN02298 184 --------------ILTFVARFLPTLAIVPT-ADLL----E--KSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVT-- 240 (330)
T ss_pred --------------HHHHHHHHCCCCccccC-CCcc----c--ccccCHHHHHHHHhCccccCCCccHHHHHHHHHHH--
Confidence 00011111111100000 0000 0 000000000000000 0000 111111111100
Q ss_pred CCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccC-Cccch
Q 011833 384 GGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRL-AAYQV 462 (476)
Q Consensus 384 ~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~-~~~~v 462 (476)
....+.+.++++|+|+++|++|.++|++.++++++.++..+++++++ ++++|..+....+ ..+.+
T Consensus 241 ---------~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~-----~~a~H~~~~e~pd~~~~~~ 306 (330)
T PLN02298 241 ---------DYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIY-----DGMMHSLLFGEPDENIEIV 306 (330)
T ss_pred ---------HHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEc-----CCcEeeeecCCCHHHHHHH
Confidence 01123577899999999999999999999999999987555678887 8999955432221 12568
Q ss_pred hHHHHHHHHhhc
Q 011833 463 YPCIIEFLTRHD 474 (476)
Q Consensus 463 ~~~i~~fL~~~~ 474 (476)
++.|++||+++.
T Consensus 307 ~~~i~~fl~~~~ 318 (330)
T PLN02298 307 RRDILSWLNERC 318 (330)
T ss_pred HHHHHHHHHHhc
Confidence 899999999863
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-24 Score=223.11 Aligned_cols=292 Identities=18% Similarity=0.261 Sum_probs=189.6
Q ss_pred EEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccc
Q 011833 79 LALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAK 158 (476)
Q Consensus 79 L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 158 (476)
+.+++|.|... ...++|||++||+..+...+++.+.++++++|+++||+||++|+||+|.|..
T Consensus 48 ~~l~~~~~~~~-~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~---------------- 110 (350)
T TIGR01836 48 VVLYRYTPVKD-NTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR---------------- 110 (350)
T ss_pred EEEEEecCCCC-cCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh----------------
Confidence 45566766432 2346789999999877777777788899999999999999999999987632
Q ss_pred cCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHH
Q 011833 159 STGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVP 238 (476)
Q Consensus 159 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 238 (476)
.+++++|..+|+.
T Consensus 111 -------------------------------------------------------------------~~~~~d~~~~~~~ 123 (350)
T TIGR01836 111 -------------------------------------------------------------------YLTLDDYINGYID 123 (350)
T ss_pred -------------------------------------------------------------------cCCHHHHHHHHHH
Confidence 2466777777899
Q ss_pred HHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhc-cC
Q 011833 239 AVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQAL-NV 317 (476)
Q Consensus 239 a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 317 (476)
+++++++++.+.+ +++++||||||.+++.+++.+| .+|+++|+++++.++.........+.......... ..
T Consensus 124 ~~v~~l~~~~~~~--~i~lvGhS~GG~i~~~~~~~~~-----~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (350)
T TIGR01836 124 KCVDYICRTSKLD--QISLLGICQGGTFSLCYAALYP-----DKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTM 196 (350)
T ss_pred HHHHHHHHHhCCC--cccEEEECHHHHHHHHHHHhCc-----hheeeEEEeccccccCCCCchhhhhccccCHHHHHHhc
Confidence 9999999987654 8999999999999999998877 67999999999988764432221111111100000 11
Q ss_pred CcCChHHHHHhhccCCCCch-HHHHHHHHhhcCCCCCCHHHHHHHhh-----hccCCCCHHHHHHHHH-HHHhCCccccC
Q 011833 318 PVIPLGTFLAAIHPFASSPP-YVLSWLKFLISAPDMMHPELFEKLIF-----SNFGNIPTKLISQLTT-VFQEGGLCDRS 390 (476)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 390 (476)
+.+|. .++...+.++.... ....++.... ...+++.+..+.. ......+...+.++.. .+....+..
T Consensus 197 ~~~p~-~~~~~~f~~l~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~-- 270 (350)
T TIGR01836 197 GNIPG-ELLNLTFLMLKPFSLGYQKYVNLVD---ILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLIN-- 270 (350)
T ss_pred CCCCH-HHHHHHHHhcCcchhhhHHHHHHHH---hcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccC--
Confidence 12222 12222222221101 1111111100 0112333322210 1112344455555543 222232221
Q ss_pred Cccc---ccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHH
Q 011833 391 GTFF---YKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCII 467 (476)
Q Consensus 391 g~~~---~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~ 467 (476)
+... ....+.++++|+|+++|++|.++|++.++.+.+.+++..++++++ ++||.+++.+.++++++++.|.
T Consensus 271 g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~------~~gH~~~~~~~~~~~~v~~~i~ 344 (350)
T TIGR01836 271 GEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSF------PGGHIGIYVSGKAQKEVPPAIG 344 (350)
T ss_pred CeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEc------CCCCEEEEECchhHhhhhHHHH
Confidence 1111 112577899999999999999999999999999998766777775 4899998888878899999999
Q ss_pred HHHHhh
Q 011833 468 EFLTRH 473 (476)
Q Consensus 468 ~fL~~~ 473 (476)
+||+++
T Consensus 345 ~wl~~~ 350 (350)
T TIGR01836 345 KWLQAR 350 (350)
T ss_pred HHHHhC
Confidence 999864
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=222.20 Aligned_cols=280 Identities=14% Similarity=0.159 Sum_probs=162.3
Q ss_pred Cce-EEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcccccc
Q 011833 75 SDW-RLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMIT 153 (476)
Q Consensus 75 dG~-~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~ 153 (476)
+|. ++++....++. +...+++|||+||++++...| ..++..|++ +|+|+++|+||||.|++...
T Consensus 69 ~g~~~i~Y~~~G~g~-~~~~gp~lvllHG~~~~~~~w-----~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-------- 133 (360)
T PLN02679 69 KGEYSINYLVKGSPE-VTSSGPPVLLVHGFGASIPHW-----RRNIGVLAK-NYTVYAIDLLGFGASDKPPG-------- 133 (360)
T ss_pred CCceeEEEEEecCcc-cCCCCCeEEEECCCCCCHHHH-----HHHHHHHhc-CCEEEEECCCCCCCCCCCCC--------
Confidence 555 77776553321 112458999999999999999 578888875 79999999999999965321
Q ss_pred ccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhh
Q 011833 154 SANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYL 233 (476)
Q Consensus 154 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (476)
..|++++++
T Consensus 134 -----------------------------------------------------------------------~~~~~~~~a 142 (360)
T PLN02679 134 -----------------------------------------------------------------------FSYTMETWA 142 (360)
T ss_pred -----------------------------------------------------------------------ccccHHHHH
Confidence 025556666
Q ss_pred hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHh-cCCCCCCcccccEEEEecccccccCChh----hHHHhhcC
Q 011833 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLS-HCGFEGKDSGFASVTTLASSLDYRPSNS----LLRLLLPL 308 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~-~~p~~~~~~~v~~lvlla~~~~~~~~~~----~~~~~~~~ 308 (476)
+|+.++++.+ +. +++++|||||||.+++.++. .+| .+|+++|++++......... ..+...+.
T Consensus 143 -~~l~~~l~~l----~~--~~~~lvGhS~Gg~ia~~~a~~~~P-----~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~ 210 (360)
T PLN02679 143 -ELILDFLEEV----VQ--KPTVLIGNSVGSLACVIAASESTR-----DLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPL 210 (360)
T ss_pred -HHHHHHHHHh----cC--CCeEEEEECHHHHHHHHHHHhcCh-----hhcCEEEEECCccccccccccchHHHhhhcch
Confidence 6777777654 22 38999999999999998886 456 89999999998643321110 01111110
Q ss_pred cchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccc
Q 011833 309 SDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCD 388 (476)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (476)
......+ +........++........+..++.........+.++..+.+.... ... .....+..++.. . .
T Consensus 211 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~-~-~- 280 (360)
T PLN02679 211 LWLIDFL----LKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPA--DDE-GALDAFVSIVTG-P-P- 280 (360)
T ss_pred HHHHHHH----hhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhc--cCC-ChHHHHHHHHhc-C-C-
Confidence 0000000 0000000011111111111222222222222333444443332111 111 111222222211 0 0
Q ss_pred cCCcccccccCCCCcccEEEEeeCCCCcCCHHH-----HHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchh
Q 011833 389 RSGTFFYKDHIGKTNVPVLALAADQDLICPTEA-----VYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVY 463 (476)
Q Consensus 389 ~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~-----~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~ 463 (476)
..+....+.++++|||+|+|++|.++|++. ..++.+.+++. +++++ +++||+ ...|.|+++.
T Consensus 281 ---~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~--~l~~i-----~~aGH~---~~~E~Pe~~~ 347 (360)
T PLN02679 281 ---GPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNV--TLYVL-----EGVGHC---PHDDRPDLVH 347 (360)
T ss_pred ---CCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCce--EEEEc-----CCCCCC---ccccCHHHHH
Confidence 011124577899999999999999999863 23455667764 67776 899994 4478899999
Q ss_pred HHHHHHHHhhcC
Q 011833 464 PCIIEFLTRHDM 475 (476)
Q Consensus 464 ~~i~~fL~~~~~ 475 (476)
+.|.+||++.+.
T Consensus 348 ~~I~~FL~~~~~ 359 (360)
T PLN02679 348 EKLLPWLAQLPS 359 (360)
T ss_pred HHHHHHHHhcCC
Confidence 999999987654
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=215.46 Aligned_cols=259 Identities=19% Similarity=0.201 Sum_probs=159.8
Q ss_pred CCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcccccc
Q 011833 74 NSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMIT 153 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~ 153 (476)
.+|.+++++..... ..+++|||+||+++++..| ..+.+.|.+ +|+|+++|+||||.|+.+..
T Consensus 9 ~~~~~~~~~~~~~~----~~~~plvllHG~~~~~~~w-----~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~-------- 70 (276)
T TIGR02240 9 LDGQSIRTAVRPGK----EGLTPLLIFNGIGANLELV-----FPFIEALDP-DLEVIAFDVPGVGGSSTPRH-------- 70 (276)
T ss_pred cCCcEEEEEEecCC----CCCCcEEEEeCCCcchHHH-----HHHHHHhcc-CceEEEECCCCCCCCCCCCC--------
Confidence 38888888765211 1247999999999999999 578888865 69999999999999964221
Q ss_pred ccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhh
Q 011833 154 SANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYL 233 (476)
Q Consensus 154 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (476)
.++++++.
T Consensus 71 ------------------------------------------------------------------------~~~~~~~~ 78 (276)
T TIGR02240 71 ------------------------------------------------------------------------PYRFPGLA 78 (276)
T ss_pred ------------------------------------------------------------------------cCcHHHHH
Confidence 25566666
Q ss_pred hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhh
Q 011833 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQ 313 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~ 313 (476)
+|+.++++.+ +. +++++|||||||.+++.+|.++| .+|+++|+++++..........+..........
T Consensus 79 -~~~~~~i~~l----~~--~~~~LvG~S~GG~va~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (276)
T TIGR02240 79 -KLAARMLDYL----DY--GQVNAIGVSWGGALAQQFAHDYP-----ERCKKLILAATAAGAVMVPGKPKVLMMMASPRR 146 (276)
T ss_pred -HHHHHHHHHh----Cc--CceEEEEECHHHHHHHHHHHHCH-----HHhhheEEeccCCccccCCCchhHHHHhcCchh
Confidence 7888877776 22 38999999999999999999988 899999999987643211111110000000000
Q ss_pred hccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcc
Q 011833 314 ALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTF 393 (476)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 393 (476)
+.+..... .....+... ....+++....+..............++ .... ..
T Consensus 147 -----------~~~~~~~~----~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------~~ 197 (276)
T TIGR02240 147 -----------YIQPSHGI----HIAPDIYGG----AFRRDPELAMAHASKVRSGGKLGYYWQL---FAGL-------GW 197 (276)
T ss_pred -----------hhcccccc----chhhhhccc----eeeccchhhhhhhhhcccCCCchHHHHH---HHHc-------CC
Confidence 00000000 000000000 0001111111111100001110111111 1000 01
Q ss_pred cccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 394 FYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 394 ~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
...+.+.++++|+|+|+|++|.++|++.++++.+.+++. +++++ ++ ||+ ...+.++++.+.|.+|+++.
T Consensus 198 ~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~--~~~~i-----~~-gH~---~~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 198 TSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNA--ELHII-----DD-GHL---FLITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred chhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCC--EEEEE-----cC-CCc---hhhccHHHHHHHHHHHHHHh
Confidence 112357889999999999999999999999999999975 66676 44 994 44788999999999999876
Q ss_pred c
Q 011833 474 D 474 (476)
Q Consensus 474 ~ 474 (476)
.
T Consensus 267 ~ 267 (276)
T TIGR02240 267 R 267 (276)
T ss_pred h
Confidence 4
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-24 Score=218.27 Aligned_cols=281 Identities=16% Similarity=0.162 Sum_probs=165.6
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
..||..+.+..+.+. ..+++|||+||++++...| ..++..|+++||+|+++|+||||.|.+.....
T Consensus 37 ~~~g~~l~~~~~~~~----~~~~~vll~HG~~~~~~~y-----~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~----- 102 (330)
T PRK10749 37 GVDDIPIRFVRFRAP----HHDRVVVICPGRIESYVKY-----AELAYDLFHLGYDVLIIDHRGQGRSGRLLDDP----- 102 (330)
T ss_pred cCCCCEEEEEEccCC----CCCcEEEEECCccchHHHH-----HHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCC-----
Confidence 469999999988653 2357899999999888777 57888899999999999999999996532100
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.. ....+++++
T Consensus 103 --------------------------------------~~-------------------------------~~~~~~~~~ 113 (330)
T PRK10749 103 --------------------------------------HR-------------------------------GHVERFNDY 113 (330)
T ss_pred --------------------------------------Cc-------------------------------CccccHHHH
Confidence 00 011355666
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCCh--hhHHHhhcCcc
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSN--SLLRLLLPLSD 310 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~--~~~~~~~~~~~ 310 (476)
+ +|+.++++.+.+..+. .+++++||||||.+++.++.++| ..|+++|+++|........ .....+.....
T Consensus 114 ~-~d~~~~~~~~~~~~~~--~~~~l~GhSmGG~ia~~~a~~~p-----~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~ 185 (330)
T PRK10749 114 V-DDLAAFWQQEIQPGPY--RKRYALAHSMGGAILTLFLQRHP-----GVFDAIALCAPMFGIVLPLPSWMARRILNWAE 185 (330)
T ss_pred H-HHHHHHHHHHHhcCCC--CCeEEEEEcHHHHHHHHHHHhCC-----CCcceEEEECchhccCCCCCcHHHHHHHHHHH
Confidence 6 7999998877554332 48999999999999999999887 7899999999875432211 01111100000
Q ss_pred hhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHh-hcCCCCCCHHHHHH---HhhhccCC-CCHHHHHHHHHHHHhCC
Q 011833 311 PIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFL-ISAPDMMHPELFEK---LIFSNFGN-IPTKLISQLTTVFQEGG 385 (476)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~ 385 (476)
....... .+.... ..|.... ....-..+++.+.. .+.+.... ........+...+..+
T Consensus 186 ~~~~~~~-----------~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (330)
T PRK10749 186 GHPRIRD-----------GYAIGT-----GRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAG- 248 (330)
T ss_pred HhcCCCC-----------cCCCCC-----CCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHH-
Confidence 0000000 000000 0000000 00000001111111 11111000 0000011111111100
Q ss_pred ccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCC-----CceeEEEecCCCCCCCcccccccccCCcc
Q 011833 386 LCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPE-----HLVSFKVFGEPRGPHYAHYDLVGSRLAAY 460 (476)
Q Consensus 386 ~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~-----~~~~~~v~~~~~~~~~gH~~~~~~~~~~~ 460 (476)
......+.++++|+|+|+|++|.++|++.++.+++.+++ .+++++++ +++||..+....+..+
T Consensus 249 -------~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~-----~gagH~~~~E~~~~r~ 316 (330)
T PRK10749 249 -------EQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVI-----KGAYHEILFEKDAMRS 316 (330)
T ss_pred -------HHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEe-----CCCcchhhhCCcHHHH
Confidence 011235678999999999999999999999999988753 23467777 9999955432222257
Q ss_pred chhHHHHHHHHhh
Q 011833 461 QVYPCIIEFLTRH 473 (476)
Q Consensus 461 ~v~~~i~~fL~~~ 473 (476)
.+++.|++||+++
T Consensus 317 ~v~~~i~~fl~~~ 329 (330)
T PRK10749 317 VALNAIVDFFNRH 329 (330)
T ss_pred HHHHHHHHHHhhc
Confidence 8999999999886
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-24 Score=215.40 Aligned_cols=274 Identities=14% Similarity=0.117 Sum_probs=159.3
Q ss_pred eeeEeeCC-Cc--eEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccc
Q 011833 67 LHYVAVPN-SD--WRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 67 ~~~v~~~~-dG--~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~ 143 (476)
..++.+.. +| .++++.... .+.+++|||+||++++...| ..+++.|+++||+|+++|+||||.|++.
T Consensus 21 ~~~~~~~~~~~~~~~i~y~~~G-----~~~~~~lvliHG~~~~~~~w-----~~~~~~L~~~gy~vi~~Dl~G~G~S~~~ 90 (302)
T PRK00870 21 PHYVDVDDGDGGPLRMHYVDEG-----PADGPPVLLLHGEPSWSYLY-----RKMIPILAAAGHRVIAPDLIGFGRSDKP 90 (302)
T ss_pred ceeEeecCCCCceEEEEEEecC-----CCCCCEEEEECCCCCchhhH-----HHHHHHHHhCCCEEEEECCCCCCCCCCC
Confidence 34565521 23 556655431 12357999999999999999 5899999988999999999999999653
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
...
T Consensus 91 ~~~----------------------------------------------------------------------------- 93 (302)
T PRK00870 91 TRR----------------------------------------------------------------------------- 93 (302)
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 210
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCC--hhh
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPS--NSL 301 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~--~~~ 301 (476)
.+|++++++ +|+.++++.+ +. +++++|||||||.+++.++.++| ++|+++|++++....... ...
T Consensus 94 -~~~~~~~~a-~~l~~~l~~l----~~--~~v~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~ 160 (302)
T PRK00870 94 -EDYTYARHV-EWMRSWFEQL----DL--TDVTLVCQDWGGLIGLRLAAEHP-----DRFARLVVANTGLPTGDGPMPDA 160 (302)
T ss_pred -ccCCHHHHH-HHHHHHHHHc----CC--CCEEEEEEChHHHHHHHHHHhCh-----hheeEEEEeCCCCCCccccchHH
Confidence 135666666 6777766654 32 38999999999999999999988 889999999874321110 000
Q ss_pred HHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHH
Q 011833 302 LRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVF 381 (476)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (476)
......+. ...+. ..+. .++.. .....+..+....+...............+..+.
T Consensus 161 ~~~~~~~~--------~~~~~-~~~~-------------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (302)
T PRK00870 161 FWAWRAFS--------QYSPV-LPVG-------------RLVNG--GTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLV 216 (302)
T ss_pred Hhhhhccc--------ccCch-hhHH-------------HHhhc--cccccCCHHHHHHhhcccCChhhhcchhhhhhcC
Confidence 00000000 00000 0000 00000 0001112222222211000000000000000000
Q ss_pred HhCCcc-ccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCc-eeEEEecCCCCCCCcccccccccCCc
Q 011833 382 QEGGLC-DRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHL-VSFKVFGEPRGPHYAHYDLVGSRLAA 459 (476)
Q Consensus 382 ~~~~~~-~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~-~~~~v~~~~~~~~~gH~~~~~~~~~~ 459 (476)
..+... ...........+.++++|+++|+|++|.++|.+. +++.+.+++.. +.+.++ +++||+. ..+.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i-----~~~gH~~---~~e~p 287 (302)
T PRK00870 217 PTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTI-----KGAGHFL---QEDSG 287 (302)
T ss_pred CCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeee-----cCCCccc---hhhCh
Confidence 000000 0000001123578899999999999999999876 88999898652 235566 8999954 47889
Q ss_pred cchhHHHHHHHHhh
Q 011833 460 YQVYPCIIEFLTRH 473 (476)
Q Consensus 460 ~~v~~~i~~fL~~~ 473 (476)
+++.+.|.+||+++
T Consensus 288 ~~~~~~l~~fl~~~ 301 (302)
T PRK00870 288 EELAEAVLEFIRAT 301 (302)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999876
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-24 Score=213.08 Aligned_cols=278 Identities=16% Similarity=0.143 Sum_probs=160.5
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccC
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
.++.+ +|.++.+..+. .+++|||+||++++...| ..+++.|++.+ +|+++|+||||.|+.+..
T Consensus 10 ~~~~~--~g~~i~y~~~G-------~g~~vvllHG~~~~~~~w-----~~~~~~L~~~~-~via~D~~G~G~S~~~~~-- 72 (295)
T PRK03592 10 RRVEV--LGSRMAYIETG-------EGDPIVFLHGNPTSSYLW-----RNIIPHLAGLG-RCLAPDLIGMGASDKPDI-- 72 (295)
T ss_pred eEEEE--CCEEEEEEEeC-------CCCEEEEECCCCCCHHHH-----HHHHHHHhhCC-EEEEEcCCCCCCCCCCCC--
Confidence 34444 89888877652 358999999999999999 58899998875 999999999999965321
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
+|
T Consensus 73 ------------------------------------------------------------------------------~~ 74 (295)
T PRK03592 73 ------------------------------------------------------------------------------DY 74 (295)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 25
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLP 307 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~ 307 (476)
++++++ +|+.++++.+ +. +++++|||||||.+++.++.++| ++|+++|++++................
T Consensus 75 ~~~~~a-~dl~~ll~~l----~~--~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lil~~~~~~~~~~~~~~~~~~~ 142 (295)
T PRK03592 75 TFADHA-RYLDAWFDAL----GL--DDVVLVGHDWGSALGFDWAARHP-----DRVRGIAFMEAIVRPMTWDDFPPAVRE 142 (295)
T ss_pred CHHHHH-HHHHHHHHHh----CC--CCeEEEEECHHHHHHHHHHHhCh-----hheeEEEEECCCCCCcchhhcchhHHH
Confidence 666666 7888887766 22 38999999999999999999998 899999999974322110000000000
Q ss_pred CcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHh-CCc
Q 011833 308 LSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQE-GGL 386 (476)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 386 (476)
. ...+..+.+... . ......++...+.... ...+.++.+..+............+..|...... +..
T Consensus 143 ~---~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (295)
T PRK03592 143 L---FQALRSPGEGEE-----M--VLEENVFIERVLPGSI--LRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEP 210 (295)
T ss_pred H---HHHHhCcccccc-----c--ccchhhHHhhcccCcc--cccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcc
Confidence 0 000000000000 0 0000000000000000 0112233332222111000000111111111000 000
Q ss_pred cccC-CcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHH-HhcCCCceeEEEecCCCCCCCcccccccccCCccchhH
Q 011833 387 CDRS-GTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETV-KLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 387 ~~~~-g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
.... ....+...+.++++|+|+|+|++|.++++....++. +.+++. +++++ +++||+.+ .+.|+++.+
T Consensus 211 ~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~v~~ 280 (295)
T PRK03592 211 ADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQL--EITVF-----GAGLHFAQ---EDSPEEIGA 280 (295)
T ss_pred hhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhc--ceeec-----cCcchhhh---hcCHHHHHH
Confidence 0000 001122457889999999999999999665555554 456654 67776 89999554 688999999
Q ss_pred HHHHHHHhhc
Q 011833 465 CIIEFLTRHD 474 (476)
Q Consensus 465 ~i~~fL~~~~ 474 (476)
.|.+|+++.+
T Consensus 281 ~i~~fl~~~~ 290 (295)
T PRK03592 281 AIAAWLRRLR 290 (295)
T ss_pred HHHHHHHHhc
Confidence 9999998764
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-24 Score=210.83 Aligned_cols=274 Identities=18% Similarity=0.196 Sum_probs=187.2
Q ss_pred eEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCc-ceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccC
Q 011833 69 YVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNA-IGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 69 ~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~-~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
+++ +.+|..|....|.|... +..+..|+++||++... ..| ..++..|+..||.|+++|++|||.|++...+-
T Consensus 31 ~~~-n~rG~~lft~~W~p~~~-~~pr~lv~~~HG~g~~~s~~~-----~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi 103 (313)
T KOG1455|consen 31 FFT-NPRGAKLFTQSWLPLSG-TEPRGLVFLCHGYGEHSSWRY-----QSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYV 103 (313)
T ss_pred eEE-cCCCCEeEEEecccCCC-CCCceEEEEEcCCcccchhhH-----HHHHHHHHhCCCeEEEeeccCCCcCCCCcccC
Confidence 444 68999999999988543 24567899999998887 344 57999999999999999999999998644310
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
=
T Consensus 104 -------------------------------------------------------------------------------~ 104 (313)
T KOG1455|consen 104 -------------------------------------------------------------------------------P 104 (313)
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh---hHHH
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS---LLRL 304 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~---~~~~ 304 (476)
+++. +.+|+....+.++.+...++.+.++.||||||.|++.++.+.| ..+.++|+++|.....+... ....
T Consensus 105 ~~d~-~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p-----~~w~G~ilvaPmc~i~~~~kp~p~v~~ 178 (313)
T KOG1455|consen 105 SFDL-VVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDP-----NFWDGAILVAPMCKISEDTKPHPPVIS 178 (313)
T ss_pred cHHH-HHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCC-----cccccceeeecccccCCccCCCcHHHH
Confidence 1222 3589999999988887766778999999999999999999877 78899999998665443221 1111
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCC---CCHHHHHHHHHHH
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGN---IPTKLISQLTTVF 381 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 381 (476)
+ ..++..+.|.....+ ...+......+++..+....+-... ...++..++.+
T Consensus 179 ~-----------------l~~l~~liP~wk~vp------~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr-- 233 (313)
T KOG1455|consen 179 I-----------------LTLLSKLIPTWKIVP------TKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLR-- 233 (313)
T ss_pred H-----------------HHHHHHhCCceeecC------CccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHH--
Confidence 1 112233333221000 0001111122344433333222111 11223333222
Q ss_pred HhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccc-cccCCcc
Q 011833 382 QEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLV-GSRLAAY 460 (476)
Q Consensus 382 ~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~-~~~~~~~ 460 (476)
.+ .+..+.+.++++|++++||++|.++.++.++++++..+..+++++++ |+.=|.-+. ...+..+
T Consensus 234 -~~--------~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlY-----pGm~H~Ll~gE~~en~e 299 (313)
T KOG1455|consen 234 -VT--------ADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLY-----PGMWHSLLSGEPDENVE 299 (313)
T ss_pred -HH--------HHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceecc-----ccHHHHhhcCCCchhHH
Confidence 11 22234788999999999999999999999999999999999999997 899994322 2355668
Q ss_pred chhHHHHHHHHhh
Q 011833 461 QVYPCIIEFLTRH 473 (476)
Q Consensus 461 ~v~~~i~~fL~~~ 473 (476)
.|+.+|++||+++
T Consensus 300 ~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 300 IVFGDIISWLDER 312 (313)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999876
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.5e-24 Score=212.70 Aligned_cols=274 Identities=20% Similarity=0.253 Sum_probs=180.9
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccc-ccccCcccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAH-RVEFGEDSM 151 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~-~~~~~~~~~ 151 (476)
..||..+.++.|.+... .+.+||++||+++++..| ..++..|..+||+|+++|+||||.|.+ ...
T Consensus 16 ~~d~~~~~~~~~~~~~~---~~g~Vvl~HG~~Eh~~ry-----~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg------ 81 (298)
T COG2267 16 GADGTRLRYRTWAAPEP---PKGVVVLVHGLGEHSGRY-----EELADDLAARGFDVYALDLRGHGRSPRGQRG------ 81 (298)
T ss_pred cCCCceEEEEeecCCCC---CCcEEEEecCchHHHHHH-----HHHHHHHHhCCCEEEEecCCCCCCCCCCCcC------
Confidence 46999999999976543 238899999999999999 689999999999999999999999963 221
Q ss_pred ccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchh
Q 011833 152 ITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDH 231 (476)
Q Consensus 152 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (476)
.+. +|++
T Consensus 82 -----------------------------------------------------------~~~--------------~f~~ 88 (298)
T COG2267 82 -----------------------------------------------------------HVD--------------SFAD 88 (298)
T ss_pred -----------------------------------------------------------Cch--------------hHHH
Confidence 111 2455
Q ss_pred hhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC--Ch-hhHHHhhcC
Q 011833 232 YLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP--SN-SLLRLLLPL 308 (476)
Q Consensus 232 ~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~--~~-~~~~~~~~~ 308 (476)
|. .|+.++++.+.... .+.+++++||||||.|++.++.+++ .+|.++|+.+|.+.... .. ...+.....
T Consensus 89 ~~-~dl~~~~~~~~~~~--~~~p~~l~gHSmGg~Ia~~~~~~~~-----~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~ 160 (298)
T COG2267 89 YV-DDLDAFVETIAEPD--PGLPVFLLGHSMGGLIALLYLARYP-----PRIDGLVLSSPALGLGGAILRLILARLALKL 160 (298)
T ss_pred HH-HHHHHHHHHHhccC--CCCCeEEEEeCcHHHHHHHHHHhCC-----ccccEEEEECccccCChhHHHHHHHHHhccc
Confidence 56 89999999887642 2348999999999999999999987 88999999999887664 10 011111110
Q ss_pred cchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccc
Q 011833 309 SDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCD 388 (476)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (476)
+.++.+.+.... - . ...........+++..+.+..+............+........
T Consensus 161 -----------------~~~~~p~~~~~~-~-~-~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~--- 217 (298)
T COG2267 161 -----------------LGRIRPKLPVDS-N-L-LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGR--- 217 (298)
T ss_pred -----------------ccccccccccCc-c-c-ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhc---
Confidence 011111100000 0 0 0000000111245555555443322222222222222222221
Q ss_pred cCCcccccccCCCCcccEEEEeeCCCCcCC-HHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCc--cchhHH
Q 011833 389 RSGTFFYKDHIGKTNVPVLALAADQDLICP-TEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAA--YQVYPC 465 (476)
Q Consensus 389 ~~g~~~~~~~l~~i~vPvLii~G~~D~~vp-~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~--~~v~~~ 465 (476)
........++++|+|+++|++|.+++ .+...++++.....+++++++ +++.|.-+ .+... +++++.
T Consensus 218 ----~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~-----~g~~He~~--~E~~~~r~~~~~~ 286 (298)
T COG2267 218 ----VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVI-----PGAYHELL--NEPDRAREEVLKD 286 (298)
T ss_pred ----ccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEec-----CCcchhhh--cCcchHHHHHHHH
Confidence 01123467789999999999999999 799999999988777788887 99999433 34445 899999
Q ss_pred HHHHHHhhcC
Q 011833 466 IIEFLTRHDM 475 (476)
Q Consensus 466 i~~fL~~~~~ 475 (476)
+.+||+++..
T Consensus 287 ~~~~l~~~~~ 296 (298)
T COG2267 287 ILAWLAEALP 296 (298)
T ss_pred HHHHHHhhcc
Confidence 9999998753
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-23 Score=217.23 Aligned_cols=268 Identities=16% Similarity=0.225 Sum_probs=169.5
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
..+|..+.++.|.|... ..+++||++||++++...| ..++..|+++||.|+++|+||||.|++...
T Consensus 117 ~~~~~~l~~~~~~p~~~--~~~~~Vl~lHG~~~~~~~~-----~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~------- 182 (395)
T PLN02652 117 GARRNALFCRSWAPAAG--EMRGILIIIHGLNEHSGRY-----LHFAKQLTSCGFGVYAMDWIGHGGSDGLHG------- 182 (395)
T ss_pred CCCCCEEEEEEecCCCC--CCceEEEEECCchHHHHHH-----HHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-------
Confidence 56788888888877532 2467999999999998888 589999999999999999999999965321
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
...+++++
T Consensus 183 ------------------------------------------------------------------------~~~~~~~~ 190 (395)
T PLN02652 183 ------------------------------------------------------------------------YVPSLDYV 190 (395)
T ss_pred ------------------------------------------------------------------------CCcCHHHH
Confidence 01234444
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchh
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPI 312 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~ 312 (476)
. +|+.++++++..... ..+++++||||||.+++.++. +| +...+|+++|+.+|...+.........+.+
T Consensus 191 ~-~Dl~~~l~~l~~~~~--~~~i~lvGhSmGG~ial~~a~-~p--~~~~~v~glVL~sP~l~~~~~~~~~~~~~~----- 259 (395)
T PLN02652 191 V-EDTEAFLEKIRSENP--GVPCFLFGHSTGGAVVLKAAS-YP--SIEDKLEGIVLTSPALRVKPAHPIVGAVAP----- 259 (395)
T ss_pred H-HHHHHHHHHHHHhCC--CCCEEEEEECHHHHHHHHHHh-cc--CcccccceEEEECcccccccchHHHHHHHH-----
Confidence 5 899999999976542 237999999999999987764 44 112479999999987655432211111110
Q ss_pred hhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccC---CCCHHHHHHHHHHHHhCCcccc
Q 011833 313 QALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFG---NIPTKLISQLTTVFQEGGLCDR 389 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 389 (476)
++..+.+...... ... .......+++.......+... ..............
T Consensus 260 ------------l~~~~~p~~~~~~-----~~~-~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~-------- 313 (395)
T PLN02652 260 ------------IFSLVAPRFQFKG-----ANK-RGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRIS-------- 313 (395)
T ss_pred ------------HHHHhCCCCcccC-----ccc-ccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHH--------
Confidence 0111111100000 000 000000011111111111100 00001110110000
Q ss_pred CCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHH
Q 011833 390 SGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEF 469 (476)
Q Consensus 390 ~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~f 469 (476)
....+.+.++++|+|++||++|.++|++.++++++.+...+++++++ ++++|..+. .+.++++++.|.+|
T Consensus 314 ---~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~-----~ga~H~l~~--e~~~e~v~~~I~~F 383 (395)
T PLN02652 314 ---SYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLY-----DGFLHDLLF--EPEREEVGRDIIDW 383 (395)
T ss_pred ---HHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEE-----CCCeEEecc--CCCHHHHHHHHHHH
Confidence 00123578899999999999999999999999999987766788887 899995443 44689999999999
Q ss_pred HHhh
Q 011833 470 LTRH 473 (476)
Q Consensus 470 L~~~ 473 (476)
|+++
T Consensus 384 L~~~ 387 (395)
T PLN02652 384 MEKR 387 (395)
T ss_pred HHHH
Confidence 9876
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=204.95 Aligned_cols=246 Identities=16% Similarity=0.224 Sum_probs=149.6
Q ss_pred cEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhhhH
Q 011833 96 PLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQL 175 (476)
Q Consensus 96 ~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (476)
.|||+||++.+...| ..++..|++.||+|+++|+||||.|.....
T Consensus 5 ~vvllHG~~~~~~~w-----~~~~~~L~~~~~~via~Dl~G~G~S~~~~~------------------------------ 49 (255)
T PLN02965 5 HFVFVHGASHGAWCW-----YKLATLLDAAGFKSTCVDLTGAGISLTDSN------------------------------ 49 (255)
T ss_pred EEEEECCCCCCcCcH-----HHHHHHHhhCCceEEEecCCcCCCCCCCcc------------------------------
Confidence 499999999999999 588899988899999999999999964321
Q ss_pred HHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcE
Q 011833 176 METVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKL 255 (476)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki 255 (476)
..|++++++ +|+.++++.+. . .+++
T Consensus 50 -------------------------------------------------~~~~~~~~a-~dl~~~l~~l~----~-~~~~ 74 (255)
T PLN02965 50 -------------------------------------------------TVSSSDQYN-RPLFALLSDLP----P-DHKV 74 (255)
T ss_pred -------------------------------------------------ccCCHHHHH-HHHHHHHHhcC----C-CCCE
Confidence 125667777 78888887652 1 1389
Q ss_pred eEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCCh--hhHHHhhcCcchhhhccCCcCChHHHHHhh-ccC
Q 011833 256 LAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSN--SLLRLLLPLSDPIQALNVPVIPLGTFLAAI-HPF 332 (476)
Q Consensus 256 ~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 332 (476)
++|||||||.+++.++.++| ++|+++|++++........ ........... .. +... ...
T Consensus 75 ~lvGhSmGG~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~--~~-----------~~~~~~~~ 136 (255)
T PLN02965 75 ILVGHSIGGGSVTEALCKFT-----DKISMAIYVAAAMVKPGSIISPRLKNVMEGTE--KI-----------WDYTFGEG 136 (255)
T ss_pred EEEecCcchHHHHHHHHhCc-----hheeEEEEEccccCCCCCCccHHHHhhhhccc--cc-----------eeeeeccC
Confidence 99999999999999999988 8999999998753211100 00000000000 00 0000 000
Q ss_pred CCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeC
Q 011833 333 ASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAAD 412 (476)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~ 412 (476)
...... ......+....++.. ..+..........+.............+...+.++++|+++|+|+
T Consensus 137 ~~~~~~-----------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~ 202 (255)
T PLN02965 137 PDKPPT-----------GIMMKPEFVRHYYYN---QSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTA 202 (255)
T ss_pred CCCCcc-----------hhhcCHHHHHHHHhc---CCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcC
Confidence 000000 000001111111100 111111111111111111100000011122456799999999999
Q ss_pred CCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 413 QDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 413 ~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
+|.++|++..+.+.+.+++. ++.++ +++||+.+ .+.|++|.+.|.+|++..
T Consensus 203 ~D~~~~~~~~~~~~~~~~~a--~~~~i-----~~~GH~~~---~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 203 KDNLFDPVRQDVMVENWPPA--QTYVL-----EDSDHSAF---FSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred CCCCCCHHHHHHHHHhCCcc--eEEEe-----cCCCCchh---hcCHHHHHHHHHHHHHHh
Confidence 99999999999999999986 56666 89999554 789999999999998764
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.91 E-value=6e-23 Score=202.29 Aligned_cols=253 Identities=16% Similarity=0.208 Sum_probs=144.9
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
.+++|||+||++.+...|. +.......|++.||+|+++|+||||.|+......
T Consensus 29 ~~~~ivllHG~~~~~~~~~--~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~------------------------- 81 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWS--NYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDE------------------------- 81 (282)
T ss_pred CCCeEEEECCCCCchhhHH--HHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcc-------------------------
Confidence 3578999999998887772 0012345667789999999999999996432100
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
..+. .+ .+|+.++++.+ +.
T Consensus 82 -----------------------------------------------------~~~~-~~-~~~l~~~l~~l----~~-- 100 (282)
T TIGR03343 82 -----------------------------------------------------QRGL-VN-ARAVKGLMDAL----DI-- 100 (282)
T ss_pred -----------------------------------------------------cccc-hh-HHHHHHHHHHc----CC--
Confidence 0011 11 25666665554 33
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccC
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPF 332 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (476)
++++++||||||.+++.++.++| .+|+++|++++........ .+ .+... ...+.. ....
T Consensus 101 ~~~~lvG~S~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~------~~--~~~~~-------~~~~~~-~~~~ 159 (282)
T TIGR03343 101 EKAHLVGNSMGGATALNFALEYP-----DRIGKLILMGPGGLGPSLF------AP--MPMEG-------IKLLFK-LYAE 159 (282)
T ss_pred CCeeEEEECchHHHHHHHHHhCh-----HhhceEEEECCCCCCcccc------cc--CchHH-------HHHHHH-HhcC
Confidence 48999999999999999999987 8999999998753211000 00 00000 000000 0000
Q ss_pred CCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeC
Q 011833 333 ASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAAD 412 (476)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~ 412 (476)
........++..........+.+..+..... ....+ .....+........+. .......+.++++|+|+++|+
T Consensus 160 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~l~~i~~Pvlli~G~ 232 (282)
T TIGR03343 160 -PSYETLKQMLNVFLFDQSLITEELLQGRWEN-IQRQP-EHLKNFLISSQKAPLS----TWDVTARLGEIKAKTLVTWGR 232 (282)
T ss_pred -CCHHHHHHHHhhCccCcccCcHHHHHhHHHH-hhcCH-HHHHHHHHhccccccc----cchHHHHHhhCCCCEEEEEcc
Confidence 0000000111111111111222222111100 00111 1111111110001111 122334678899999999999
Q ss_pred CCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHH
Q 011833 413 QDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLT 471 (476)
Q Consensus 413 ~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~ 471 (476)
+|.++|++.++++.+.+++. +++++ +++||+ ...+.++.+.+.|.+||+
T Consensus 233 ~D~~v~~~~~~~~~~~~~~~--~~~~i-----~~agH~---~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 233 DDRFVPLDHGLKLLWNMPDA--QLHVF-----SRCGHW---AQWEHADAFNRLVIDFLR 281 (282)
T ss_pred CCCcCCchhHHHHHHhCCCC--EEEEe-----CCCCcC---CcccCHHHHHHHHHHHhh
Confidence 99999999999999999975 67776 899994 447889999999999996
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-22 Score=207.26 Aligned_cols=274 Identities=16% Similarity=0.206 Sum_probs=159.0
Q ss_pred CceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccc
Q 011833 75 SDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITS 154 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~ 154 (476)
+|..+++... +++++|||+||++++...| ..+...|++ +|+|+++|+||||.|++...
T Consensus 74 ~~~~i~Y~~~-------g~g~~vvliHG~~~~~~~w-----~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~--------- 131 (354)
T PLN02578 74 RGHKIHYVVQ-------GEGLPIVLIHGFGASAFHW-----RYNIPELAK-KYKVYALDLLGFGWSDKALI--------- 131 (354)
T ss_pred CCEEEEEEEc-------CCCCeEEEECCCCCCHHHH-----HHHHHHHhc-CCEEEEECCCCCCCCCCccc---------
Confidence 6777766543 1357899999999999889 577788865 69999999999999976321
Q ss_pred cccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhh
Q 011833 155 ANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLE 234 (476)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (476)
.|+.+++.
T Consensus 132 -----------------------------------------------------------------------~~~~~~~a- 139 (354)
T PLN02578 132 -----------------------------------------------------------------------EYDAMVWR- 139 (354)
T ss_pred -----------------------------------------------------------------------ccCHHHHH-
Confidence 25555555
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhh
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQA 314 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~ 314 (476)
+|+.++++.+. .++++++||||||.+++.+|.++| .+|+++|++++...+........... ......
T Consensus 140 ~~l~~~i~~~~------~~~~~lvG~S~Gg~ia~~~A~~~p-----~~v~~lvLv~~~~~~~~~~~~~~~~~--~~~~~~ 206 (354)
T PLN02578 140 DQVADFVKEVV------KEPAVLVGNSLGGFTALSTAVGYP-----ELVAGVALLNSAGQFGSESREKEEAI--VVEETV 206 (354)
T ss_pred HHHHHHHHHhc------cCCeEEEEECHHHHHHHHHHHhCh-----HhcceEEEECCCcccccccccccccc--ccccch
Confidence 67776666553 238999999999999999999988 88999999987543322110000000 000000
Q ss_pred ccC-CcCChHHHHHhh-----ccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccc
Q 011833 315 LNV-PVIPLGTFLAAI-----HPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCD 388 (476)
Q Consensus 315 ~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (476)
... ...+....+... +........+...+.........++....+.+............+.+....+...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 282 (354)
T PLN02578 207 LTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFN---- 282 (354)
T ss_pred hhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcC----
Confidence 000 000000000000 0000111111111111122222233333322221111111111111111111100
Q ss_pred cCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHH
Q 011833 389 RSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIE 468 (476)
Q Consensus 389 ~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~ 468 (476)
.......+.+.++++|+++|+|++|.++|.+.++++.+.+++. +++++ ++||+ ...+.|+++.+.|.+
T Consensus 283 -~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a--~l~~i------~~GH~---~~~e~p~~~~~~I~~ 350 (354)
T PLN02578 283 -QSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDT--TLVNL------QAGHC---PHDEVPEQVNKALLE 350 (354)
T ss_pred -CCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC--EEEEe------CCCCC---ccccCHHHHHHHHHH
Confidence 0112233467899999999999999999999999999999875 56665 47894 447899999999999
Q ss_pred HHH
Q 011833 469 FLT 471 (476)
Q Consensus 469 fL~ 471 (476)
|++
T Consensus 351 fl~ 353 (354)
T PLN02578 351 WLS 353 (354)
T ss_pred HHh
Confidence 996
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-21 Score=210.78 Aligned_cols=275 Identities=21% Similarity=0.322 Sum_probs=189.1
Q ss_pred eEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccc
Q 011833 77 WRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSAN 156 (476)
Q Consensus 77 ~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~ 156 (476)
..+.+++|.|... ...++|||++||+......||+.|.++++++|.++||+|+++|+||+|.|.+
T Consensus 172 ~~~eLi~Y~P~t~-~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~-------------- 236 (532)
T TIGR01838 172 ELFQLIQYEPTTE-TVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQA-------------- 236 (532)
T ss_pred CcEEEEEeCCCCC-cCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccc--------------
Confidence 3467788877643 2367999999999999999999999999999999999999999999998743
Q ss_pred cccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhcc
Q 011833 157 AKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEED 236 (476)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 236 (476)
.+++++|+.++
T Consensus 237 ---------------------------------------------------------------------~~~~ddY~~~~ 247 (532)
T TIGR01838 237 ---------------------------------------------------------------------DKTFDDYIRDG 247 (532)
T ss_pred ---------------------------------------------------------------------cCChhhhHHHH
Confidence 24567888788
Q ss_pred HHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHH----HHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcc--
Q 011833 237 VPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYA----MLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSD-- 310 (476)
Q Consensus 237 l~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~----~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~-- 310 (476)
+.++++.+++..+.+ +++++||||||.++.. +++..+ +.+|+++++++++.++.... .+..+.....
T Consensus 248 i~~al~~v~~~~g~~--kv~lvG~cmGGtl~a~ala~~aa~~~----~~rv~slvll~t~~Df~~~G-~l~~f~~~~~~~ 320 (532)
T TIGR01838 248 VIAALEVVEAITGEK--QVNCVGYCIGGTLLSTALAYLAARGD----DKRIKSATFFTTLLDFSDPG-ELGVFVDEEIVA 320 (532)
T ss_pred HHHHHHHHHHhcCCC--CeEEEEECcCcHHHHHHHHHHHHhCC----CCccceEEEEecCcCCCCcc-hhhhhcCchhHH
Confidence 999999999887765 8999999999998632 344431 26899999999999877543 3332221111
Q ss_pred -hhhhc-cCCcCChHHHHHhhccCCCCchHHH-HHHHHhhcCCCCCCHHHHHHHhhh-ccCCCCHHHHHHHH-HHHHhCC
Q 011833 311 -PIQAL-NVPVIPLGTFLAAIHPFASSPPYVL-SWLKFLISAPDMMHPELFEKLIFS-NFGNIPTKLISQLT-TVFQEGG 385 (476)
Q Consensus 311 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~ 385 (476)
..... ..+.+|.. .+...+.++.....+. .++..++...... + +...+++ .....|.....++. +++....
T Consensus 321 ~~e~~~~~~G~lpg~-~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~-~--fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~ 396 (532)
T TIGR01838 321 GIERQNGGGGYLDGR-QMAVTFSLLRENDLIWNYYVDNYLKGKSPV-P--FDLLFWNSDSTNLPGKMHNFYLRNLYLQNA 396 (532)
T ss_pred HHHHHHHhcCCCCHH-HHHHHHHhcChhhHHHHHHHHHHhcCCCcc-c--hhHHHHhccCccchHHHHHHHHHHHHhcCC
Confidence 11111 12344443 5555666655444322 2344344333222 1 2222222 22367888888876 4565555
Q ss_pred ccccCCcccc---cccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccc
Q 011833 386 LCDRSGTFFY---KDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGS 455 (476)
Q Consensus 386 ~~~~~g~~~~---~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~ 455 (476)
+.. |.+.. ...+.+|++|+|+|+|++|.++|++.++.+.+.+++. ...++ +++||...+.+
T Consensus 397 L~~--G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~--~~~vL-----~~sGHi~~ien 460 (532)
T TIGR01838 397 LTT--GGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGP--KTFVL-----GESGHIAGVVN 460 (532)
T ss_pred CcC--CeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCC--EEEEE-----CCCCCchHhhC
Confidence 552 33322 3478999999999999999999999999999999854 44455 78899755543
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-22 Score=194.76 Aligned_cols=246 Identities=15% Similarity=0.211 Sum_probs=151.6
Q ss_pred EEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcccccccccccc
Q 011833 80 ALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKS 159 (476)
Q Consensus 80 ~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~ 159 (476)
.++.+.+. +++.+|+|||+||++++...| ..++..|+ ++|+|+++|+||||.|....
T Consensus 4 ~~~~~~~~--~~~~~~~iv~lhG~~~~~~~~-----~~~~~~l~-~~~~vi~~D~~G~G~s~~~~--------------- 60 (255)
T PRK10673 4 NIRAQTAQ--NPHNNSPIVLVHGLFGSLDNL-----GVLARDLV-NDHDIIQVDMRNHGLSPRDP--------------- 60 (255)
T ss_pred eeeeccCC--CCCCCCCEEEECCCCCchhHH-----HHHHHHHh-hCCeEEEECCCCCCCCCCCC---------------
Confidence 34444343 245689999999999999888 47788886 46999999999999986422
Q ss_pred CCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHH
Q 011833 160 TGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPA 239 (476)
Q Consensus 160 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a 239 (476)
.+++++++ +|+.+
T Consensus 61 ------------------------------------------------------------------~~~~~~~~-~d~~~ 73 (255)
T PRK10673 61 ------------------------------------------------------------------VMNYPAMA-QDLLD 73 (255)
T ss_pred ------------------------------------------------------------------CCCHHHHH-HHHHH
Confidence 25666666 78888
Q ss_pred HHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc-ccccCChhhHHHhhcCcchhhhccCC
Q 011833 240 VMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS-LDYRPSNSLLRLLLPLSDPIQALNVP 318 (476)
Q Consensus 240 ~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (476)
+++.+ +. ++++++||||||.+++.++.++| .+|+++|++++. ..+.... ....+. .
T Consensus 74 ~l~~l----~~--~~~~lvGhS~Gg~va~~~a~~~~-----~~v~~lvli~~~~~~~~~~~-~~~~~~----~------- 130 (255)
T PRK10673 74 TLDAL----QI--EKATFIGHSMGGKAVMALTALAP-----DRIDKLVAIDIAPVDYHVRR-HDEIFA----A------- 130 (255)
T ss_pred HHHHc----CC--CceEEEEECHHHHHHHHHHHhCH-----hhcceEEEEecCCCCccchh-hHHHHH----H-------
Confidence 88775 22 37999999999999999999987 889999999743 2221100 000000 0
Q ss_pred cCChHHHHHhhcc-CCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCC----CHHHHHHHHHHHHhCCccccCCcc
Q 011833 319 VIPLGTFLAAIHP-FASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNI----PTKLISQLTTVFQEGGLCDRSGTF 393 (476)
Q Consensus 319 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~ 393 (476)
+..... ...........+...+ ..+....+....+... ....+... +. ..
T Consensus 131 -------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---------~~ 185 (255)
T PRK10673 131 -------INAVSEAGATTRQQAAAIMRQHL------NEEGVIQFLLKSFVDGEWRFNVPVLWDQ---YP---------HI 185 (255)
T ss_pred -------HHHhhhcccccHHHHHHHHHHhc------CCHHHHHHHHhcCCcceeEeeHHHHHHh---HH---------HH
Confidence 000000 0000000000000000 0111111111000000 00000000 00 00
Q ss_pred cccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 394 FYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 394 ~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
...+.+.++++|+|+|+|++|..++.+.++.+.+.+++. +++++ +++||+. ..+.|+++.+.|.+||+.+
T Consensus 186 ~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~---~~~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 186 VGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQA--RAHVI-----AGAGHWV---HAEKPDAVLRAIRRYLNDK 255 (255)
T ss_pred hCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCc--EEEEe-----CCCCCee---eccCHHHHHHHHHHHHhcC
Confidence 011356778999999999999999999999999999875 66766 8999944 4788899999999999864
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=200.37 Aligned_cols=288 Identities=18% Similarity=0.168 Sum_probs=170.2
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
+..+++. +|.++++..- +++.+|.|+++||+..+...| +.....|+++||+|+++|+||+|.|+.+..
T Consensus 23 ~hk~~~~--~gI~~h~~e~-----g~~~gP~illlHGfPe~wysw-----r~q~~~la~~~~rviA~DlrGyG~Sd~P~~ 90 (322)
T KOG4178|consen 23 SHKFVTY--KGIRLHYVEG-----GPGDGPIVLLLHGFPESWYSW-----RHQIPGLASRGYRVIAPDLRGYGFSDAPPH 90 (322)
T ss_pred ceeeEEE--ccEEEEEEee-----cCCCCCEEEEEccCCccchhh-----hhhhhhhhhcceEEEecCCCCCCCCCCCCC
Confidence 3345554 7766666554 234679999999999999999 689999999999999999999999987664
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
. .
T Consensus 91 ~------------------------------------------------------------------------------~ 92 (322)
T KOG4178|consen 91 I------------------------------------------------------------------------------S 92 (322)
T ss_pred c------------------------------------------------------------------------------c
Confidence 2 2
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHh
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLL 305 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~ 305 (476)
+|+++..+ .|+.++++.+. .+|++++||+||+++++.++..+| ++|+++|+++.+.... ........
T Consensus 93 ~Yt~~~l~-~di~~lld~Lg------~~k~~lvgHDwGaivaw~la~~~P-----erv~~lv~~nv~~~~p-~~~~~~~~ 159 (322)
T KOG4178|consen 93 EYTIDELV-GDIVALLDHLG------LKKAFLVGHDWGAIVAWRLALFYP-----ERVDGLVTLNVPFPNP-KLKPLDSS 159 (322)
T ss_pred eeeHHHHH-HHHHHHHHHhc------cceeEEEeccchhHHHHHHHHhCh-----hhcceEEEecCCCCCc-ccchhhhh
Confidence 57888877 88888888774 349999999999999999999998 9999999998766511 10000000
Q ss_pred h---cCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHH
Q 011833 306 L---PLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQ 382 (476)
Q Consensus 306 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (476)
. ......-.+..+..+...+ ...............-...+..... ....+..-.....+..+...+.
T Consensus 160 ~~~f~~~~y~~~fQ~~~~~E~~~-----s~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~w~t~edi~~~~~~f~ 229 (322)
T KOG4178|consen 160 KAIFGKSYYICLFQEPGKPETEL-----SKDDTEMLVKTFRTRKTPGPLIVPK-----QPNENPLWLTEEDIAFYVSKFQ 229 (322)
T ss_pred ccccCccceeEeccccCcchhhh-----ccchhHHhHHhhhccccCCccccCC-----CCCCccchhhHHHHHHHHhccc
Confidence 0 0000000000000000000 0000000000000000000000000 0000000011122222333333
Q ss_pred hCCccccCC----cccc----cccCCCCcccEEEEeeCCCCcCCHH-HHHHHHHhcCCCceeEEEecCCCCCCCcccccc
Q 011833 383 EGGLCDRSG----TFFY----KDHIGKTNVPVLALAADQDLICPTE-AVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLV 453 (476)
Q Consensus 383 ~~~~~~~~g----~~~~----~~~l~~i~vPvLii~G~~D~~vp~~-~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~ 453 (476)
.+.+...-+ .... ...+.++++||++|+|++|.+++.. ..+.+.+.++... +.+++ +|.|| .
T Consensus 230 ~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~-~~vv~-----~~~gH---~ 300 (322)
T KOG4178|consen 230 IDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLT-ERVVI-----EGIGH---F 300 (322)
T ss_pred cccccccchhhHHHhhCchhccccccccccceEEEEecCcccccchhHHHHHHHhhcccc-ceEEe-----cCCcc---c
Confidence 222332111 1111 2256789999999999999998876 4455555666542 34554 89999 6
Q ss_pred cccCCccchhHHHHHHHHhhcC
Q 011833 454 GSRLAAYQVYPCIIEFLTRHDM 475 (476)
Q Consensus 454 ~~~~~~~~v~~~i~~fL~~~~~ 475 (476)
.+.|.|++|.+.|++|+++..+
T Consensus 301 vqqe~p~~v~~~i~~f~~~~~~ 322 (322)
T KOG4178|consen 301 VQQEKPQEVNQAILGFINSFSM 322 (322)
T ss_pred ccccCHHHHHHHHHHHHHhhcC
Confidence 6689999999999999998653
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=190.88 Aligned_cols=230 Identities=19% Similarity=0.281 Sum_probs=168.0
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
.+..|||+||+.++.... +.++++|.++||+|+++.+||||....
T Consensus 14 G~~AVLllHGFTGt~~Dv-----r~Lgr~L~e~GyTv~aP~ypGHG~~~e------------------------------ 58 (243)
T COG1647 14 GNRAVLLLHGFTGTPRDV-----RMLGRYLNENGYTVYAPRYPGHGTLPE------------------------------ 58 (243)
T ss_pred CCEEEEEEeccCCCcHHH-----HHHHHHHHHCCceEecCCCCCCCCCHH------------------------------
Confidence 358899999999998888 689999999999999999999997521
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
+| -+.++++|. +|+.+..++|.+. ..
T Consensus 59 -----------------------------------------~f---------l~t~~~DW~-~~v~d~Y~~L~~~---gy 84 (243)
T COG1647 59 -----------------------------------------DF---------LKTTPRDWW-EDVEDGYRDLKEA---GY 84 (243)
T ss_pred -----------------------------------------HH---------hcCCHHHHH-HHHHHHHHHHHHc---CC
Confidence 11 023455556 7888888888754 23
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccC
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPF 332 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (476)
+.|.++|.||||.+++.+|.++| ++++|.++++.........+..+.
T Consensus 85 ~eI~v~GlSmGGv~alkla~~~p-------~K~iv~m~a~~~~k~~~~iie~~l-------------------------- 131 (243)
T COG1647 85 DEIAVVGLSMGGVFALKLAYHYP-------PKKIVPMCAPVNVKSWRIIIEGLL-------------------------- 131 (243)
T ss_pred CeEEEEeecchhHHHHHHHhhCC-------ccceeeecCCcccccchhhhHHHH--------------------------
Confidence 48999999999999999999987 899999999887555432222221
Q ss_pred CCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeC
Q 011833 333 ASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAAD 412 (476)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~ 412 (476)
.+.. ........+.+.+++...+. ...+...+.++..++.. ....+..|.+|+++++|.
T Consensus 132 --------~y~~-~~kk~e~k~~e~~~~e~~~~-~~~~~~~~~~~~~~i~~-----------~~~~~~~I~~pt~vvq~~ 190 (243)
T COG1647 132 --------EYFR-NAKKYEGKDQEQIDKEMKSY-KDTPMTTTAQLKKLIKD-----------ARRSLDKIYSPTLVVQGR 190 (243)
T ss_pred --------HHHH-HhhhccCCCHHHHHHHHHHh-hcchHHHHHHHHHHHHH-----------HHhhhhhcccchhheecc
Confidence 1110 01111223444444433222 23344455555444321 124688899999999999
Q ss_pred CCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 413 QDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 413 ~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
+|.++|.+.+..+++.+-..+++++++ +++||+ +.....++++.++|+.||+.
T Consensus 191 ~D~mv~~~sA~~Iy~~v~s~~KeL~~~-----e~SgHV--It~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 191 QDEMVPAESANFIYDHVESDDKELKWL-----EGSGHV--ITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred cCCCCCHHHHHHHHHhccCCcceeEEE-----ccCCce--eecchhHHHHHHHHHHHhhC
Confidence 999999999999999998888999998 899993 55577789999999999974
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.3e-22 Score=190.12 Aligned_cols=245 Identities=16% Similarity=0.258 Sum_probs=145.8
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
.+|+|||+||+++++..| ..++..|. +||+|+++|+||||.|.....
T Consensus 12 ~~~~iv~lhG~~~~~~~~-----~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~--------------------------- 58 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGSYW-----APQLDVLT-QRFHVVTYDHRGTGRSPGELP--------------------------- 58 (257)
T ss_pred CCCEEEEEcCCCcchhHH-----HHHHHHHH-hccEEEEEcCCCCCCCCCCCc---------------------------
Confidence 468999999999999888 46777775 579999999999999964221
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
..+++++++ +|+.++++.+ +.
T Consensus 59 ----------------------------------------------------~~~~~~~~~-~~~~~~i~~~----~~-- 79 (257)
T TIGR03611 59 ----------------------------------------------------PGYSIAHMA-DDVLQLLDAL----NI-- 79 (257)
T ss_pred ----------------------------------------------------ccCCHHHHH-HHHHHHHHHh----CC--
Confidence 125556666 6777777654 22
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccC
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPF 332 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (476)
++++++||||||.+++.++.++| .+|+++|++++........ ...... ....+. ......+.......
T Consensus 80 ~~~~l~G~S~Gg~~a~~~a~~~~-----~~v~~~i~~~~~~~~~~~~--~~~~~~---~~~~~~--~~~~~~~~~~~~~~ 147 (257)
T TIGR03611 80 ERFHFVGHALGGLIGLQLALRYP-----ERLLSLVLINAWSRPDPHT--RRCFDV---RIALLQ--HAGPEAYVHAQALF 147 (257)
T ss_pred CcEEEEEechhHHHHHHHHHHCh-----HHhHHheeecCCCCCChhH--HHHHHH---HHHHHh--ccCcchhhhhhhhh
Confidence 38999999999999999999877 6899999998754332110 000000 000000 00000000000000
Q ss_pred CCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCC-CCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEee
Q 011833 333 ASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGN-IPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAA 411 (476)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G 411 (476)
.. ...|+.... +...+... ..... .............. ..+....+.++++|+++++|
T Consensus 148 ~~----~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~P~l~i~g 206 (257)
T TIGR03611 148 LY----PADWISENA-------ARLAADEA-HALAHFPGKANVLRRINALE---------AFDVSARLDRIQHPVLLIAN 206 (257)
T ss_pred hc----cccHhhccc-------hhhhhhhh-hcccccCccHHHHHHHHHHH---------cCCcHHHhcccCccEEEEec
Confidence 00 001111000 00000000 00000 01111111111111 11223467789999999999
Q ss_pred CCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 412 DQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 412 ~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
++|.++|++.++++.+.+++. +++++ +++||.. ..+.++++.+.|.+||++
T Consensus 207 ~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~---~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 207 RDDMLVPYTQSLRLAAALPNA--QLKLL-----PYGGHAS---NVTDPETFNRALLDFLKT 257 (257)
T ss_pred CcCcccCHHHHHHHHHhcCCc--eEEEE-----CCCCCCc---cccCHHHHHHHHHHHhcC
Confidence 999999999999999999875 56666 8999954 367889999999999963
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-21 Score=207.72 Aligned_cols=284 Identities=18% Similarity=0.214 Sum_probs=158.5
Q ss_pred CCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHH---hCCCcEEEecCCCCCCcccccccCccc
Q 011833 74 NSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMS---GQGFDTWILEVRGAGLSAHRVEFGEDS 150 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~---~~Gy~V~~~D~rG~G~S~~~~~~~~~~ 150 (476)
..|..|+++...|... ..+++|||+||++++...|. ..+...|+ +++|+|+++|+||||.|+++..
T Consensus 183 ~~~~~l~~~~~gp~~~--~~k~~VVLlHG~~~s~~~W~----~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~----- 251 (481)
T PLN03087 183 SSNESLFVHVQQPKDN--KAKEDVLFIHGFISSSAFWT----ETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD----- 251 (481)
T ss_pred eCCeEEEEEEecCCCC--CCCCeEEEECCCCccHHHHH----HHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC-----
Confidence 3668888888766532 34689999999999998883 12445555 3799999999999999965321
Q ss_pred cccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCch
Q 011833 151 MITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFD 230 (476)
Q Consensus 151 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (476)
..|+++
T Consensus 252 --------------------------------------------------------------------------~~ytl~ 257 (481)
T PLN03087 252 --------------------------------------------------------------------------SLYTLR 257 (481)
T ss_pred --------------------------------------------------------------------------CcCCHH
Confidence 125666
Q ss_pred hhhhccHH-HHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh-hHHHhhcC
Q 011833 231 HYLEEDVP-AVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS-LLRLLLPL 308 (476)
Q Consensus 231 ~~~~~Dl~-a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~-~~~~~~~~ 308 (476)
+++ +|+. ++++ ..+. ++++++||||||.+++.++.++| ++|+++|+++++........ ..+.....
T Consensus 258 ~~a-~~l~~~ll~----~lg~--~k~~LVGhSmGG~iAl~~A~~~P-----e~V~~LVLi~~~~~~~~~~~~~~~~~~~~ 325 (481)
T PLN03087 258 EHL-EMIERSVLE----RYKV--KSFHIVAHSLGCILALALAVKHP-----GAVKSLTLLAPPYYPVPKGVQATQYVMRK 325 (481)
T ss_pred HHH-HHHHHHHHH----HcCC--CCEEEEEECHHHHHHHHHHHhCh-----HhccEEEEECCCccccccchhHHHHHHHH
Confidence 666 5553 4444 3343 48999999999999999999998 88999999998654332211 01110000
Q ss_pred cchhhhccCCcCChHHHH----HhhccC----CCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHH
Q 011833 309 SDPIQALNVPVIPLGTFL----AAIHPF----ASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTV 380 (476)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (476)
....... +........ ...... .+..+....++...+.. ........+.+.. .........+..+
T Consensus 326 ~~~~~~~--~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~l~~~~~~----~~~~~~~~~l~~~ 398 (481)
T PLN03087 326 VAPRRVW--PPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTR-NRMRTFLIEGFFC----HTHNAAWHTLHNI 398 (481)
T ss_pred hcccccC--CccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhh-hhhhHHHHHHHHh----ccchhhHHHHHHH
Confidence 0000000 000000000 000000 00000000110000000 0000000000000 0000000001111
Q ss_pred HHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCcc
Q 011833 381 FQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAY 460 (476)
Q Consensus 381 ~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~ 460 (476)
........ .......+.++++|+|+|+|++|.++|++..+.+.+.+|+. +++++ +++||+.++ .+.++
T Consensus 399 i~~~~~~l---~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a--~l~vI-----~~aGH~~~v--~e~p~ 466 (481)
T PLN03087 399 ICGSGSKL---DGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRA--RVKVI-----DDKDHITIV--VGRQK 466 (481)
T ss_pred Hhchhhhh---hhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCC--EEEEe-----CCCCCcchh--hcCHH
Confidence 11000000 00011233478999999999999999999999999999976 67777 899996653 36789
Q ss_pred chhHHHHHHHHhh
Q 011833 461 QVYPCIIEFLTRH 473 (476)
Q Consensus 461 ~v~~~i~~fL~~~ 473 (476)
.+.+.|.+|.++.
T Consensus 467 ~fa~~L~~F~~~~ 479 (481)
T PLN03087 467 EFARELEEIWRRS 479 (481)
T ss_pred HHHHHHHHHhhcc
Confidence 9999999998764
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.1e-22 Score=188.89 Aligned_cols=240 Identities=18% Similarity=0.255 Sum_probs=144.4
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
.+|+|||+||++.+...| ..+++.|. .||+|+++|+||||.|.....
T Consensus 12 ~~~~li~~hg~~~~~~~~-----~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~--------------------------- 58 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMW-----DPVLPALT-PDFRVLRYDKRGHGLSDAPEG--------------------------- 58 (251)
T ss_pred CCCeEEEEcCcccchhhH-----HHHHHHhh-cccEEEEecCCCCCCCCCCCC---------------------------
Confidence 468899999999999888 47777775 689999999999999854221
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
.+++++++ +|+.++++.+ +.
T Consensus 59 -----------------------------------------------------~~~~~~~~-~~~~~~i~~~----~~-- 78 (251)
T TIGR02427 59 -----------------------------------------------------PYSIEDLA-DDVLALLDHL----GI-- 78 (251)
T ss_pred -----------------------------------------------------CCCHHHHH-HHHHHHHHHh----CC--
Confidence 24555555 5776666654 22
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccC
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPF 332 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (476)
++++++||||||.+++.++.++| .+|++++++++................+. . .........
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p-----~~v~~li~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~---- 140 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRP-----DRVRALVLSNTAAKIGTPESWNARIAAVR-A--------EGLAALADA---- 140 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCH-----HHhHHHhhccCccccCchhhHHHHHhhhh-h--------ccHHHHHHH----
Confidence 38999999999999999999887 78999999887543222111111000000 0 000000000
Q ss_pred CCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeC
Q 011833 333 ASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAAD 412 (476)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~ 412 (476)
....++..... .......+.+... +...+..........+. .......+.++++|+++++|+
T Consensus 141 -----~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~Pvlii~g~ 202 (251)
T TIGR02427 141 -----VLERWFTPGFR---EAHPARLDLYRNM-LVRQPPDGYAGCCAAIR---------DADFRDRLGAIAVPTLCIAGD 202 (251)
T ss_pred -----HHHHHcccccc---cCChHHHHHHHHH-HHhcCHHHHHHHHHHHh---------cccHHHHhhhcCCCeEEEEec
Confidence 00000000000 0001111111000 00011111111111110 111224577899999999999
Q ss_pred CCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHH
Q 011833 413 QDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLT 471 (476)
Q Consensus 413 ~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~ 471 (476)
+|.++|.+....+.+.+++. +++++ +++||..+ .+.++.+.+.|.+||+
T Consensus 203 ~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 203 QDGSTPPELVREIADLVPGA--RFAEI-----RGAGHIPC---VEQPEAFNAALRDFLR 251 (251)
T ss_pred cCCcCChHHHHHHHHhCCCc--eEEEE-----CCCCCccc---ccChHHHHHHHHHHhC
Confidence 99999999999999999864 66776 89999554 5778999999999974
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.8e-22 Score=197.57 Aligned_cols=232 Identities=16% Similarity=0.264 Sum_probs=150.8
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCC-CCcccccc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGA-GLSAHRVE 145 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~-G~S~~~~~ 145 (476)
.|-+. ++||.+|.+|+..|......+.++||++||++.+...+ ..++++|+++||.|+.+|+||+ |.|++...
T Consensus 11 ~~~~~-~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~-----~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~ 84 (307)
T PRK13604 11 DHVIC-LENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHF-----AGLAEYLSSNGFHVIRYDSLHHVGLSSGTID 84 (307)
T ss_pred hheEE-cCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHH-----HHHHHHHHHCCCEEEEecCCCCCCCCCCccc
Confidence 34455 78999999999988643345678999999999987666 6899999999999999999987 88865321
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
T Consensus 85 -------------------------------------------------------------------------------- 84 (307)
T PRK13604 85 -------------------------------------------------------------------------------- 84 (307)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHh
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLL 305 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~ 305 (476)
++++... .+|+.++++|++++. ..++.++||||||.+++.+|.. ..++++|+.+|..++.... .+.+
T Consensus 85 ~~t~s~g-~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~-------~~v~~lI~~sp~~~l~d~l--~~~~ 151 (307)
T PRK13604 85 EFTMSIG-KNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINE-------IDLSFLITAVGVVNLRDTL--ERAL 151 (307)
T ss_pred cCccccc-HHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcC-------CCCCEEEEcCCcccHHHHH--HHhh
Confidence 1122222 489999999998752 2489999999999998777764 3489999999987644210 0000
Q ss_pred hcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC
Q 011833 306 LPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG 385 (476)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (476)
.. .+ ..++.... +..++ +.+.... ...|......-.
T Consensus 152 ~~------~~------------~~~p~~~l--------------p~~~d-----------~~g~~l~-~~~f~~~~~~~~ 187 (307)
T PRK13604 152 GY------DY------------LSLPIDEL--------------PEDLD-----------FEGHNLG-SEVFVTDCFKHG 187 (307)
T ss_pred hc------cc------------ccCccccc--------------ccccc-----------ccccccc-HHHHHHHHHhcC
Confidence 00 00 00000000 00000 0000000 001111110000
Q ss_pred ccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcc
Q 011833 386 LCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAH 449 (476)
Q Consensus 386 ~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH 449 (476)
+. ......+.+.++++|+|+|||++|.+||++.++++++.++..+++++++ |++.|
T Consensus 188 ~~---~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i-----~Ga~H 243 (307)
T PRK13604 188 WD---TLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSL-----IGSSH 243 (307)
T ss_pred cc---ccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEe-----CCCcc
Confidence 00 0111124567788999999999999999999999999997666788887 99999
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=8e-22 Score=192.58 Aligned_cols=269 Identities=14% Similarity=0.150 Sum_probs=155.2
Q ss_pred eEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCc
Q 011833 69 YVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGE 148 (476)
Q Consensus 69 ~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~ 148 (476)
++++ +|.++.+....+ ..+++||++||++++...| ..+...|++ +|+|+++|+||||.|+....
T Consensus 10 ~~~~--~~~~~~~~~~g~-----~~~~~vv~~hG~~~~~~~~-----~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~--- 73 (278)
T TIGR03056 10 RVTV--GPFHWHVQDMGP-----TAGPLLLLLHGTGASTHSW-----RDLMPPLAR-SFRVVAPDLPGHGFTRAPFR--- 73 (278)
T ss_pred eeeE--CCEEEEEEecCC-----CCCCeEEEEcCCCCCHHHH-----HHHHHHHhh-CcEEEeecCCCCCCCCCccc---
Confidence 4544 888887766522 2358999999999999999 578888865 69999999999999865321
Q ss_pred cccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCC
Q 011833 149 DSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWD 228 (476)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (476)
..++
T Consensus 74 ----------------------------------------------------------------------------~~~~ 77 (278)
T TIGR03056 74 ----------------------------------------------------------------------------FRFT 77 (278)
T ss_pred ----------------------------------------------------------------------------cCCC
Confidence 0245
Q ss_pred chhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcC
Q 011833 229 FDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPL 308 (476)
Q Consensus 229 ~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~ 308 (476)
+++++ +|+.++++.+ +. ++++++||||||.+++.++.++| .+++++|++++........ .....+.
T Consensus 78 ~~~~~-~~l~~~i~~~----~~--~~~~lvG~S~Gg~~a~~~a~~~p-----~~v~~~v~~~~~~~~~~~~--~~~~~~~ 143 (278)
T TIGR03056 78 LPSMA-EDLSALCAAE----GL--SPDGVIGHSAGAAIALRLALDGP-----VTPRMVVGINAALMPFEGM--AGTLFPY 143 (278)
T ss_pred HHHHH-HHHHHHHHHc----CC--CCceEEEECccHHHHHHHHHhCC-----cccceEEEEcCcccccccc--cccccch
Confidence 55555 6776666543 22 37899999999999999999987 7799999998764321110 0000000
Q ss_pred cchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccc
Q 011833 309 SDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCD 388 (476)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (476)
..... ...+.. ......... ........+.. .....++.....+ .... ... ........++....
T Consensus 144 ~~~~~-~~~~~~--~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~-~~~-~~~~~~~~~~~~~~--- 208 (278)
T TIGR03056 144 MARVL-ACNPFT--PPMMSRGAA---DQQRVERLIRD---TGSLLDKAGMTYY-GRLI-RSP-AHVDGALSMMAQWD--- 208 (278)
T ss_pred hhHhh-hhcccc--hHHHHhhcc---cCcchhHHhhc---cccccccchhhHH-HHhh-cCc-hhhhHHHHHhhccc---
Confidence 00000 000000 000000000 00000000000 0000111101000 0000 000 00000001110000
Q ss_pred cCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHH
Q 011833 389 RSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIE 468 (476)
Q Consensus 389 ~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~ 468 (476)
.......+.++++|+|+|+|++|.++|++.++.+.+.+++. ++.++ +++||+.+ .+.++++.+.|.+
T Consensus 209 ---~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~e~p~~~~~~i~~ 275 (278)
T TIGR03056 209 ---LAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTA--TLHVV-----PGGGHLVH---EEQADGVVGLILQ 275 (278)
T ss_pred ---ccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCC--eEEEE-----CCCCCccc---ccCHHHHHHHHHH
Confidence 00112357789999999999999999999999999999875 56666 89999544 6789999999999
Q ss_pred HHH
Q 011833 469 FLT 471 (476)
Q Consensus 469 fL~ 471 (476)
|++
T Consensus 276 f~~ 278 (278)
T TIGR03056 276 AAE 278 (278)
T ss_pred HhC
Confidence 985
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.9e-22 Score=206.25 Aligned_cols=279 Identities=18% Similarity=0.230 Sum_probs=161.0
Q ss_pred ceeeEeeCCCceEEEEEEEcCCC-CCCCCCCcEEEecCCCCCcce-eecCCCCCHHHHHHhCCCcEEEecCCCCCCcccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSP-AAPQRNHPLLLLSGIGTNAIG-YDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~-~~~~~~~~VlllHG~~~~~~~-~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~ 143 (476)
++..+. +.||..+.+.++.+.. ..+..+|+|||+||+++++.. |. ..++..+.++||+|+++|+||||.|...
T Consensus 72 ~re~l~-~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~----~~~~~~~~~~g~~vv~~d~rG~G~s~~~ 146 (388)
T PLN02511 72 RRECLR-TPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYV----RHMLLRARSKGWRVVVFNSRGCADSPVT 146 (388)
T ss_pred eEEEEE-CCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHH----HHHHHHHHHCCCEEEEEecCCCCCCCCC
Confidence 344566 7899999887664321 112357899999999776543 52 3567777889999999999999998542
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
.. +
T Consensus 147 ~~------------------------------------------~----------------------------------- 149 (388)
T PLN02511 147 TP------------------------------------------Q----------------------------------- 149 (388)
T ss_pred Cc------------------------------------------C-----------------------------------
Confidence 11 0
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHH
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLR 303 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~ 303 (476)
+....+ .+|+.++++++..+... .++++|||||||.+++.++.++| ....|.++++++++.+.......+.
T Consensus 150 ---~~~~~~-~~Dl~~~i~~l~~~~~~--~~~~lvG~SlGg~i~~~yl~~~~---~~~~v~~~v~is~p~~l~~~~~~~~ 220 (388)
T PLN02511 150 ---FYSASF-TGDLRQVVDHVAGRYPS--ANLYAAGWSLGANILVNYLGEEG---ENCPLSGAVSLCNPFDLVIADEDFH 220 (388)
T ss_pred ---EEcCCc-hHHHHHHHHHHHHHCCC--CCEEEEEechhHHHHHHHHHhcC---CCCCceEEEEECCCcCHHHHHHHHh
Confidence 001122 37999999999887543 48999999999999999999987 1123889998888765421110000
Q ss_pred HhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcC-CCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHH
Q 011833 304 LLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISA-PDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQ 382 (476)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (476)
... . ..+ ...+...+.... ......+.. ....+...+. ....+.+|.+.+.
T Consensus 221 ~~~--~---~~y------~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~----------~~~~~~~fd~~~t 272 (388)
T PLN02511 221 KGF--N---NVY------DKALAKALRKIF-------AKHALLFEGLGGEYNIPLVA----------NAKTVRDFDDGLT 272 (388)
T ss_pred ccH--H---HHH------HHHHHHHHHHHH-------HHHHHHHhhCCCccCHHHHH----------hCCCHHHHHHhhh
Confidence 000 0 000 000000000000 000000000 0001111000 0012223333222
Q ss_pred hC--CccccC---CcccccccCCCCcccEEEEeeCCCCcCCHHHH-HHHHHhcCCCceeEEEecCCCCCCCccccccccc
Q 011833 383 EG--GLCDRS---GTFFYKDHIGKTNVPVLALAADQDLICPTEAV-YETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSR 456 (476)
Q Consensus 383 ~~--~~~~~~---g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~-~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~ 456 (476)
.. .+...+ ........+++|++|+|+|+|++|+++|++.. ....+.+++. .+.++ +++||+.++
T Consensus 273 ~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~--~l~~~-----~~gGH~~~~--- 342 (388)
T PLN02511 273 RVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNC--LLIVT-----PSGGHLGWV--- 342 (388)
T ss_pred hhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCE--EEEEC-----CCcceeccc---
Confidence 21 111000 00112347889999999999999999998765 4466667754 67776 899998874
Q ss_pred CCccc------hhHHHHHHHHhh
Q 011833 457 LAAYQ------VYPCIIEFLTRH 473 (476)
Q Consensus 457 ~~~~~------v~~~i~~fL~~~ 473 (476)
|.++. +.+.+.+||+..
T Consensus 343 E~p~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 343 AGPEAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred cCCCCCCCCccHHHHHHHHHHHH
Confidence 44443 478888999764
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-21 Score=197.06 Aligned_cols=276 Identities=17% Similarity=0.250 Sum_probs=165.3
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcc-eeec----------------CCC----CCHHHHHHhCCCcEEE
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAI-GYDL----------------SPE----YSFARYMSGQGFDTWI 131 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~-~~~~----------------~~~----~~l~~~L~~~Gy~V~~ 131 (476)
+.||..|.++.|.|.. .+.+|+++||+++++. .|.. +.+ ..+++.|.++||+|++
T Consensus 4 ~~~g~~l~~~~~~~~~----~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~ 79 (332)
T TIGR01607 4 NKDGLLLKTYSWIVKN----AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYG 79 (332)
T ss_pred CCCCCeEEEeeeeccC----CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEE
Confidence 5699999999987642 3689999999999885 1100 011 3679999999999999
Q ss_pred ecCCCCCCcccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccch
Q 011833 132 LEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTS 211 (476)
Q Consensus 132 ~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (476)
+|+||||.|.+..... .
T Consensus 80 ~D~rGHG~S~~~~~~~----------------------------------------------------g----------- 96 (332)
T TIGR01607 80 LDLQGHGESDGLQNLR----------------------------------------------------G----------- 96 (332)
T ss_pred ecccccCCCccccccc----------------------------------------------------c-----------
Confidence 9999999986532100 0
Q ss_pred hhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHH------------------hCCCCCcEeEEEEchHHHHHHHHHhc
Q 011833 212 LEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTL------------------SKPKDGKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~------------------~~~~~~ki~lvGhS~GG~ia~~~a~~ 273 (476)
.-.+|++++ +|+.++++.+.+. ......+++++||||||.+++.++..
T Consensus 97 -------------~~~~~~~~v-~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~ 162 (332)
T TIGR01607 97 -------------HINCFDDLV-YDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLEL 162 (332)
T ss_pred -------------chhhHHHHH-HHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHH
Confidence 001456666 7898888887652 01113489999999999999999876
Q ss_pred CCCCC---CcccccEEEEecccccccCCh-----hhHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHH
Q 011833 274 CGFEG---KDSGFASVTTLASSLDYRPSN-----SLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKF 345 (476)
Q Consensus 274 ~p~~~---~~~~v~~lvlla~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (476)
++-.. ....|+++|+++|........ .......++ ..++..+.+.+..... .+
T Consensus 163 ~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l--------------~~~~~~~~p~~~~~~~--~~--- 223 (332)
T TIGR01607 163 LGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPV--------------MNFMSRVFPTFRISKK--IR--- 223 (332)
T ss_pred hccccccccccccceEEEeccceEEecccCCCcchhhhhHHHH--------------HHHHHHHCCcccccCc--cc---
Confidence 54110 012699999999876432110 000000000 0111112221110000 00
Q ss_pred hhcCCCCCCHHHHHHHhhhccC---CCCHHHHHHHHHHHHhCCccccCCcccccccCCCC--cccEEEEeeCCCCcCCHH
Q 011833 346 LISAPDMMHPELFEKLIFSNFG---NIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKT--NVPVLALAADQDLICPTE 420 (476)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i--~vPvLii~G~~D~~vp~~ 420 (476)
-..++...+.+..+... ..+......+...... + .+.+.++ ++|+|+++|++|.+++++
T Consensus 224 -----~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~--~---------~~~~~~i~~~~P~Lii~G~~D~vv~~~ 287 (332)
T TIGR01607 224 -----YEKSPYVNDIIKFDKFRYDGGITFNLASELIKATDT--L---------DCDIDYIPKDIPILFIHSKGDCVCSYE 287 (332)
T ss_pred -----cccChhhhhHHhcCccccCCcccHHHHHHHHHHHHH--H---------HhhHhhCCCCCCEEEEEeCCCCccCHH
Confidence 00112222222222211 1222222222222110 0 1123444 799999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHH
Q 011833 421 AVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLT 471 (476)
Q Consensus 421 ~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~ 471 (476)
.++++++.+...+++++++ ++++|..+. +..++++++.|++||+
T Consensus 288 ~~~~~~~~~~~~~~~l~~~-----~g~~H~i~~--E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 288 GTVSFYNKLSISNKELHTL-----EDMDHVITI--EPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHHHHHhccCCCcEEEEE-----CCCCCCCcc--CCCHHHHHHHHHHHhh
Confidence 9999998886656788887 899995442 3346889999999996
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.3e-21 Score=197.29 Aligned_cols=69 Identities=22% Similarity=0.250 Sum_probs=58.1
Q ss_pred cccCCCCcccEEEEeeCCCCcCCHHHH--HHHHHhcCCCceeEEEecCCCCCCC----cccccccccCCccchhHHHHHH
Q 011833 396 KDHIGKTNVPVLALAADQDLICPTEAV--YETVKLIPEHLVSFKVFGEPRGPHY----AHYDLVGSRLAAYQVYPCIIEF 469 (476)
Q Consensus 396 ~~~l~~i~vPvLii~G~~D~~vp~~~~--~~~~~~l~~~~~~~~v~~~~~~~~~----gH~~~~~~~~~~~~v~~~i~~f 469 (476)
.+.+.+|++|||+|+|++|.++|++.+ +++.+.+++. +++++ |++ ||.. . +.|+++.+.|.+|
T Consensus 285 ~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a--~l~~i-----~~a~~~~GH~~---~-e~P~~~~~~i~~F 353 (360)
T PRK06489 285 SPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHG--RLVLI-----PASPETRGHGT---T-GSAKFWKAYLAEF 353 (360)
T ss_pred HHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCC--eEEEE-----CCCCCCCCccc---c-cCHHHHHHHHHHH
Confidence 457889999999999999999999875 7899999986 67777 674 9943 3 5899999999999
Q ss_pred HHhhcC
Q 011833 470 LTRHDM 475 (476)
Q Consensus 470 L~~~~~ 475 (476)
|++.++
T Consensus 354 L~~~~~ 359 (360)
T PRK06489 354 LAQVPK 359 (360)
T ss_pred HHhccc
Confidence 998754
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-21 Score=189.43 Aligned_cols=67 Identities=19% Similarity=0.247 Sum_probs=58.1
Q ss_pred cccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 396 KDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 396 ~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
.+.+.++++|||+|+|++|.++|.+.++.+.+.+++. +++++ +++||+.. .+.|+.|.+.+.+|-++
T Consensus 189 ~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~--~~~~i-----~~~gH~~~---~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 189 RQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHS--ESYIF-----AKAAHAPF---ISHPAEFCHLLVALKQR 255 (256)
T ss_pred HHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCC--eEEEe-----CCCCCCcc---ccCHHHHHHHHHHHhcc
Confidence 3567889999999999999999999999999999876 67777 99999544 78999999999998654
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.5e-21 Score=182.13 Aligned_cols=64 Identities=23% Similarity=0.290 Sum_probs=55.9
Q ss_pred ccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHH
Q 011833 397 DHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFL 470 (476)
Q Consensus 397 ~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL 470 (476)
..+.++++|+|+++|++|.++|++..+.+.+.+++. +++++ +++||+.+ .+.++++.+.|.+|+
T Consensus 182 ~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 182 QPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHS--ELYIF-----AKAAHAPF---LSHAEAFCALLVAFK 245 (245)
T ss_pred HHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCC--eEEEe-----CCCCCCcc---ccCHHHHHHHHHhhC
Confidence 457889999999999999999999999999999865 67776 89999655 678999999999985
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.1e-21 Score=195.99 Aligned_cols=69 Identities=16% Similarity=0.183 Sum_probs=59.6
Q ss_pred ccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCC-CcccccccccCCccchhHHHHHHHHhh
Q 011833 395 YKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPH-YAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 395 ~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
+.+.+.++++|||+|+|++|.++|++..+.+.+.+++. +++++ ++ +||+.+ .+.++++...|.+||++.
T Consensus 267 ~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a--~l~~i-----~~~~GH~~~---~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 267 LAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNA--ELRPI-----ESIWGHLAG---FGQNPADIAFIDAALKEL 336 (339)
T ss_pred HHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC--eEEEe-----CCCCCcccc---ccCcHHHHHHHHHHHHHH
Confidence 34578899999999999999999999999999999875 67776 77 899655 688899999999999874
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.7e-21 Score=219.75 Aligned_cols=299 Identities=17% Similarity=0.247 Sum_probs=186.3
Q ss_pred EEEEEEEcCCCCC---CCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccc
Q 011833 78 RLALWRYLPSPAA---PQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITS 154 (476)
Q Consensus 78 ~L~~~~~~p~~~~---~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~ 154 (476)
.+.+++|.|.... +..++||||+||++.+...|+..|.++++++|.++||+|+++|+ |.|++...
T Consensus 48 ~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~--------- 115 (994)
T PRK07868 48 MYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEG--------- 115 (994)
T ss_pred cEEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHc---------
Confidence 3567888765421 23569999999999999999988888999999999999999995 55543211
Q ss_pred cccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhh
Q 011833 155 ANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLE 234 (476)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (476)
..++++++|+
T Consensus 116 ---------------------------------------------------------------------~~~~~l~~~i- 125 (994)
T PRK07868 116 ---------------------------------------------------------------------GMERNLADHV- 125 (994)
T ss_pred ---------------------------------------------------------------------CccCCHHHHH-
Confidence 0135667777
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh--hHHHh-hcC--c
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS--LLRLL-LPL--S 309 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~--~~~~~-~~~--~ 309 (476)
.++.++++.+++..+ +++++|||||||.+++.+++.++ +.+|+++|+++++.++..... ....+ .+. .
T Consensus 126 ~~l~~~l~~v~~~~~---~~v~lvG~s~GG~~a~~~aa~~~----~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~ 198 (994)
T PRK07868 126 VALSEAIDTVKDVTG---RDVHLVGYSQGGMFCYQAAAYRR----SKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADF 198 (994)
T ss_pred HHHHHHHHHHHHhhC---CceEEEEEChhHHHHHHHHHhcC----CCccceEEEEecccccCCCCcccchhhhhhccccc
Confidence 577778887777654 27999999999999999987554 368999999999987643210 00000 000 0
Q ss_pred chhhhccCCcCChHHHHHhhccCCCCchHHHHHH--HHhhcCCC-CCCHHHHHHHhhhc-cCCCCHHHHHHHHHHHHh-C
Q 011833 310 DPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWL--KFLISAPD-MMHPELFEKLIFSN-FGNIPTKLISQLTTVFQE-G 384 (476)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~ 384 (476)
..........+|. .+....+..+.....+.... ...+..++ ..+++.++.+.... +...+.....++...+.. .
T Consensus 199 ~~~~~~~~~~~p~-~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n 277 (994)
T PRK07868 199 MADHVFNRLDIPG-WMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHN 277 (994)
T ss_pred chhhhhhcCCCCH-HHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhC
Confidence 0000001111111 11121222221111111111 11122222 23333334433222 212333344444443322 1
Q ss_pred CccccCCccccc---ccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccc
Q 011833 385 GLCDRSGTFFYK---DHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQ 461 (476)
Q Consensus 385 ~~~~~~g~~~~~---~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~ 461 (476)
.+. .+.+... ..+.+|++|+|+|+|++|.++|++.++.+.+.+++.++. .++ +++||++++.+..++++
T Consensus 278 ~~~--~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~-~~~-----~~~GH~g~~~g~~a~~~ 349 (994)
T PRK07868 278 RMM--TGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVY-ESL-----IRAGHFGLVVGSRAAQQ 349 (994)
T ss_pred ccc--CceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEE-EEe-----CCCCCEeeeechhhhhh
Confidence 111 1222221 258999999999999999999999999999999986332 344 79999999999999999
Q ss_pred hhHHHHHHHHhhc
Q 011833 462 VYPCIIEFLTRHD 474 (476)
Q Consensus 462 v~~~i~~fL~~~~ 474 (476)
+|+.|.+||.+++
T Consensus 350 ~wp~i~~wl~~~~ 362 (994)
T PRK07868 350 TWPTVADWVKWLE 362 (994)
T ss_pred hChHHHHHHHHhc
Confidence 9999999999875
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.7e-21 Score=191.48 Aligned_cols=266 Identities=13% Similarity=0.104 Sum_probs=146.5
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccccc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEF 146 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~ 146 (476)
..++.+ +|.++++... +.+++|||+||++.+...| ..+...|.+ +|+|+++|+||||.|+.....
T Consensus 16 ~~~~~~--~~~~i~y~~~-------G~~~~iv~lHG~~~~~~~~-----~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~ 80 (286)
T PRK03204 16 SRWFDS--SRGRIHYIDE-------GTGPPILLCHGNPTWSFLY-----RDIIVALRD-RFRCVAPDYLGFGLSERPSGF 80 (286)
T ss_pred ceEEEc--CCcEEEEEEC-------CCCCEEEEECCCCccHHHH-----HHHHHHHhC-CcEEEEECCCCCCCCCCCCcc
Confidence 345654 7777766543 2358899999999888888 467777764 699999999999999653210
Q ss_pred CccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccC
Q 011833 147 GEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKND 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
.
T Consensus 81 -------------------------------------------------------------------------------~ 81 (286)
T PRK03204 81 -------------------------------------------------------------------------------G 81 (286)
T ss_pred -------------------------------------------------------------------------------c
Confidence 1
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhh
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLL 306 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~ 306 (476)
|++++++ +++.+++ +..+. ++++++||||||.+++.++..+| .+|+++|++++....... .....+.
T Consensus 82 ~~~~~~~-~~~~~~~----~~~~~--~~~~lvG~S~Gg~va~~~a~~~p-----~~v~~lvl~~~~~~~~~~-~~~~~~~ 148 (286)
T PRK03204 82 YQIDEHA-RVIGEFV----DHLGL--DRYLSMGQDWGGPISMAVAVERA-----DRVRGVVLGNTWFWPADT-LAMKAFS 148 (286)
T ss_pred cCHHHHH-HHHHHHH----HHhCC--CCEEEEEECccHHHHHHHHHhCh-----hheeEEEEECccccCCCc-hhHHHHH
Confidence 3333333 4444444 44443 38999999999999999999987 889999998765421111 0000000
Q ss_pred cCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCc
Q 011833 307 PLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGL 386 (476)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (476)
.+... .+ ....++ ....+...++... .....+.+....+... ...+.. ...+..+. ..+
T Consensus 149 ~~~~~-----~~--~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~--~~~ 207 (286)
T PRK03204 149 RVMSS-----PP--VQYAIL-------RRNFFVERLIPAG--TEHRPSSAVMAHYRAV--QPNAAA-RRGVAEMP--KQI 207 (286)
T ss_pred HHhcc-----cc--chhhhh-------hhhHHHHHhcccc--ccCCCCHHHHHHhcCC--CCCHHH-HHHHHHHH--Hhc
Confidence 00000 00 000000 0000000000000 0011122222222100 000100 00000000 000
Q ss_pred cccCC-cccccccCCC--CcccEEEEeeCCCCcCCHH-HHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccch
Q 011833 387 CDRSG-TFFYKDHIGK--TNVPVLALAADQDLICPTE-AVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQV 462 (476)
Q Consensus 387 ~~~~g-~~~~~~~l~~--i~vPvLii~G~~D~~vp~~-~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v 462 (476)
..... .......+.+ +++|||+|+|++|.++++. ..+.+.+.+++. +++++ +++||+ ...+.|+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~--~~~~i-----~~aGH~---~~~e~Pe~~ 277 (286)
T PRK03204 208 LAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDH--VLVEL-----PNAKHF---IQEDAPDRI 277 (286)
T ss_pred chhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCC--eEEEc-----CCCccc---ccccCHHHH
Confidence 00000 0000011111 2899999999999998655 578889999975 67777 899994 447999999
Q ss_pred hHHHHHHH
Q 011833 463 YPCIIEFL 470 (476)
Q Consensus 463 ~~~i~~fL 470 (476)
.+.|.+||
T Consensus 278 ~~~i~~~~ 285 (286)
T PRK03204 278 AAAIIERF 285 (286)
T ss_pred HHHHHHhc
Confidence 99999997
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.3e-21 Score=184.83 Aligned_cols=240 Identities=12% Similarity=0.135 Sum_probs=136.1
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhh
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKS 173 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (476)
+|+|||+||+++++..| ..+++.| ++|+|+++|+||||.|.+...
T Consensus 2 ~p~vvllHG~~~~~~~w-----~~~~~~l--~~~~vi~~D~~G~G~S~~~~~---------------------------- 46 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDW-----QPVGEAL--PDYPRLYIDLPGHGGSAAISV---------------------------- 46 (242)
T ss_pred CCEEEEECCCCCChHHH-----HHHHHHc--CCCCEEEecCCCCCCCCCccc----------------------------
Confidence 57899999999999999 5788877 369999999999999965221
Q ss_pred hHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCC
Q 011833 174 QLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDG 253 (476)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ 253 (476)
.++++++ +|+.++++.+ + .+
T Consensus 47 -----------------------------------------------------~~~~~~~-~~l~~~l~~~----~--~~ 66 (242)
T PRK11126 47 -----------------------------------------------------DGFADVS-RLLSQTLQSY----N--IL 66 (242)
T ss_pred -----------------------------------------------------cCHHHHH-HHHHHHHHHc----C--CC
Confidence 1334444 6676666644 2 24
Q ss_pred cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccCC
Q 011833 254 KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFA 333 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (476)
++++|||||||.+++.++.++| +.+|++++++++................ .. .....+...
T Consensus 67 ~~~lvG~S~Gg~va~~~a~~~~----~~~v~~lvl~~~~~~~~~~~~~~~~~~~--~~------------~~~~~~~~~- 127 (242)
T PRK11126 67 PYWLVGYSLGGRIAMYYACQGL----AGGLCGLIVEGGNPGLQNAEERQARWQN--DR------------QWAQRFRQE- 127 (242)
T ss_pred CeEEEEECHHHHHHHHHHHhCC----cccccEEEEeCCCCCCCCHHHHHHHHhh--hH------------HHHHHhccC-
Confidence 8999999999999999999986 2459999998876443321110000000 00 000000000
Q ss_pred CCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeCC
Q 011833 334 SSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQ 413 (476)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~ 413 (476)
........|...... ....++....+..... ........ .++...... ...++.+.+.++++|+++|+|++
T Consensus 128 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~---~~~~~~~~l~~i~~P~lii~G~~ 198 (242)
T PRK11126 128 PLEQVLADWYQQPVF--ASLNAEQRQQLVAKRS-NNNGAAVA---AMLEATSLA---KQPDLRPALQALTFPFYYLCGER 198 (242)
T ss_pred cHHHHHHHHHhcchh--hccCccHHHHHHHhcc-cCCHHHHH---HHHHhcCcc---cCCcHHHHhhccCCCeEEEEeCC
Confidence 000011111110000 0011111111111100 11111111 111111111 11223356789999999999999
Q ss_pred CCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 414 DLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 414 D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
|..+. .+.+.. + .+++++ +++||+ ...+.|+++.+.|.+||++
T Consensus 199 D~~~~-----~~~~~~-~--~~~~~i-----~~~gH~---~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 199 DSKFQ-----ALAQQL-A--LPLHVI-----PNAGHN---AHRENPAAFAASLAQILRL 241 (242)
T ss_pred cchHH-----HHHHHh-c--CeEEEe-----CCCCCc---hhhhChHHHHHHHHHHHhh
Confidence 98652 223332 3 367777 899994 4478899999999999975
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.1e-20 Score=198.01 Aligned_cols=274 Identities=19% Similarity=0.288 Sum_probs=192.2
Q ss_pred EEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcccccccccc
Q 011833 78 RLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANA 157 (476)
Q Consensus 78 ~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~ 157 (476)
.+.+++|.|... ...+.|||+++.+......+|+.|.++++++|.++||+|+++||++-+.+.+
T Consensus 200 l~eLiqY~P~te-~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r--------------- 263 (560)
T TIGR01839 200 VLELIQYKPITE-QQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR--------------- 263 (560)
T ss_pred ceEEEEeCCCCC-CcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc---------------
Confidence 356778877543 3467999999999988889999999999999999999999999999775422
Q ss_pred ccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccH
Q 011833 158 KSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDV 237 (476)
Q Consensus 158 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 237 (476)
+|++++|+ +.+
T Consensus 264 --------------------------------------------------------------------~~~ldDYv-~~i 274 (560)
T TIGR01839 264 --------------------------------------------------------------------EWGLSTYV-DAL 274 (560)
T ss_pred --------------------------------------------------------------------CCCHHHHH-HHH
Confidence 48899999 699
Q ss_pred HHHHHHHHHHhCCCCCcEeEEEEchHHHHHHH----HHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcC--cch
Q 011833 238 PAVMEYIRTLSKPKDGKLLAVGHSMGGILLYA----MLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPL--SDP 311 (476)
Q Consensus 238 ~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~----~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~--~~~ 311 (476)
.++|+.+++.++.+ +++++||||||.++.. ++++++ +.+|++++++++++++.... ....+... ...
T Consensus 275 ~~Ald~V~~~tG~~--~vnl~GyC~GGtl~a~~~a~~aA~~~----~~~V~sltllatplDf~~~g-~l~~f~~e~~~~~ 347 (560)
T TIGR01839 275 KEAVDAVRAITGSR--DLNLLGACAGGLTCAALVGHLQALGQ----LRKVNSLTYLVSLLDSTMES-PAALFADEQTLEA 347 (560)
T ss_pred HHHHHHHHHhcCCC--CeeEEEECcchHHHHHHHHHHHhcCC----CCceeeEEeeecccccCCCC-cchhccChHHHHH
Confidence 99999999999876 9999999999999986 666654 34799999999999977532 12221100 000
Q ss_pred -h-hhccCCcCChHHHHHhhccCCCCchHHHHHH-HHh-hcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCcc
Q 011833 312 -I-QALNVPVIPLGTFLAAIHPFASSPPYVLSWL-KFL-ISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLC 387 (476)
Q Consensus 312 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (476)
. .....+.+| +..++..+.++.....+..++ ..+ ++...... + +..+..+. ...|.....++..++....+.
T Consensus 348 ~e~~~~~~G~lp-g~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~f-d-ll~Wn~D~-t~lPg~~~~e~l~ly~~N~L~ 423 (560)
T TIGR01839 348 AKRRSYQAGVLD-GSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAF-D-ILYWNNDT-TRLPAAFHGDLLDMFKSNPLT 423 (560)
T ss_pred HHHHHHhcCCcC-HHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchh-h-HHHHhCcC-ccchHHHHHHHHHHHhcCCCC
Confidence 0 111223333 456666666665544443332 222 22221111 1 33333333 377888888888877766665
Q ss_pred ccCCcccc---cccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccc
Q 011833 388 DRSGTFFY---KDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGS 455 (476)
Q Consensus 388 ~~~g~~~~---~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~ 455 (476)
.. |.+.. .-.+++|+||++++.|.+|.|+|++.++.+.+.+.. +++++.. ..||.+-+.+
T Consensus 424 ~p-G~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs-~~~fvl~------~gGHIggivn 486 (560)
T TIGR01839 424 RP-DALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG-KRRFVLS------NSGHIQSILN 486 (560)
T ss_pred CC-CCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC-CeEEEec------CCCccccccC
Confidence 31 12211 127999999999999999999999999999999976 5777763 6777655544
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.1e-20 Score=181.43 Aligned_cols=64 Identities=23% Similarity=0.384 Sum_probs=53.5
Q ss_pred ccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHH
Q 011833 397 DHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLT 471 (476)
Q Consensus 397 ~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~ 471 (476)
..+.++++|+|+++|++|.+ +++..+.+.+.+++. +++++ +++||+.+ .+.|+++.+.|.+||+
T Consensus 225 ~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 225 DKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGS--RLVVF-----PDGSHMTM---IEDPEVYFKLLSDFIR 288 (288)
T ss_pred HHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCC--eEEEe-----CCCCCCcc---cCCHHHHHHHHHHHhC
Confidence 46788999999999999985 678888888888865 56666 89999554 6789999999999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-20 Score=178.60 Aligned_cols=250 Identities=15% Similarity=0.205 Sum_probs=141.4
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhh
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKS 173 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (476)
+|+|||+||++++...| ..+.+.|+ +||+|+++|+||+|.|..+...
T Consensus 1 ~~~vv~~hG~~~~~~~~-----~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~--------------------------- 47 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADW-----QALIELLG-PHFRCLAIDLPGHGSSQSPDEI--------------------------- 47 (251)
T ss_pred CCEEEEEcCCCCchhhH-----HHHHHHhc-ccCeEEEEcCCCCCCCCCCCcc---------------------------
Confidence 37899999999999999 58889998 8999999999999999653210
Q ss_pred hHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCC
Q 011833 174 QLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDG 253 (476)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ 253 (476)
..+++++++ +| ++..+.+..+. +
T Consensus 48 ---------------------------------------------------~~~~~~~~~-~~---~~~~~~~~~~~--~ 70 (251)
T TIGR03695 48 ---------------------------------------------------ERYDFEEAA-QD---ILATLLDQLGI--E 70 (251)
T ss_pred ---------------------------------------------------ChhhHHHHH-HH---HHHHHHHHcCC--C
Confidence 012333333 33 13333343333 4
Q ss_pred cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccCC
Q 011833 254 KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFA 333 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (476)
+++++||||||.+++.++.++| ..|++++++++.................. .....+.. .
T Consensus 71 ~~~l~G~S~Gg~ia~~~a~~~~-----~~v~~lil~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~-~ 130 (251)
T TIGR03695 71 PFFLVGYSMGGRIALYYALQYP-----ERVQGLILESGSPGLATEEERAARRQNDE--------------QLAQRFEQ-E 130 (251)
T ss_pred eEEEEEeccHHHHHHHHHHhCc-----hheeeeEEecCCCCcCchHhhhhhhhcch--------------hhhhHHHh-c
Confidence 8999999999999999999987 77999999987654332211100000000 00000000 0
Q ss_pred CCchHHHHHHHHh-hcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeC
Q 011833 334 SSPPYVLSWLKFL-ISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAAD 412 (476)
Q Consensus 334 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~ 412 (476)
....+...+.... +.....+.++....+........+ ..+...... .... ....+.+.+.++++|+++++|+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~---~~~~~~~~~~~~~~P~l~i~g~ 203 (251)
T TIGR03695 131 GLEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLANNP-EGLAKMLRA---TGLG---KQPSLWPKLQALTIPVLYLCGE 203 (251)
T ss_pred CccHHHHHHhcCceeeecccCChHHhHHHHHhcccccc-hHHHHHHHH---hhhh---cccchHHHhhCCCCceEEEeeC
Confidence 0000111110000 000001122222112111111111 111111110 0000 0111223567899999999999
Q ss_pred CCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHH
Q 011833 413 QDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLT 471 (476)
Q Consensus 413 ~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~ 471 (476)
+|..++ +..+.+.+.+++. +++++ +++||+.+ .+.++++.+.|.+||+
T Consensus 204 ~D~~~~-~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 204 KDEKFV-QIAKEMQKLLPNL--TLVII-----ANAGHNIH---LENPEAFAKILLAFLE 251 (251)
T ss_pred cchHHH-HHHHHHHhcCCCC--cEEEE-----cCCCCCcC---ccChHHHHHHHHHHhC
Confidence 998774 5567777777754 67776 89999554 6778999999999984
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.6e-20 Score=192.74 Aligned_cols=266 Identities=15% Similarity=0.111 Sum_probs=158.2
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
..+|+++++....+ ..+++|||+||++++...| +.++..|++ +|+|+++|+||||.|+++....
T Consensus 111 ~~~~~~~~y~~~G~-----~~~~~ivllHG~~~~~~~w-----~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~----- 174 (383)
T PLN03084 111 SSDLFRWFCVESGS-----NNNPPVLLIHGFPSQAYSY-----RKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGY----- 174 (383)
T ss_pred cCCceEEEEEecCC-----CCCCeEEEECCCCCCHHHH-----HHHHHHHhc-CCEEEEECCCCCCCCCCCcccc-----
Confidence 46788887665422 2368999999999999999 578888875 7999999999999997643200
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
..+|+++++
T Consensus 175 -----------------------------------------------------------------------~~~ys~~~~ 183 (383)
T PLN03084 175 -----------------------------------------------------------------------GFNYTLDEY 183 (383)
T ss_pred -----------------------------------------------------------------------cccCCHHHH
Confidence 013566666
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCC--hhhHHHhhcCcc
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPS--NSLLRLLLPLSD 310 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~--~~~~~~~~~~~~ 310 (476)
+ +|+.++++.+ +. +++++||||+||.+++.++.++| .+|+++|+++++...... ......+..
T Consensus 184 a-~~l~~~i~~l----~~--~~~~LvG~s~GG~ia~~~a~~~P-----~~v~~lILi~~~~~~~~~~~p~~l~~~~~--- 248 (383)
T PLN03084 184 V-SSLESLIDEL----KS--DKVSLVVQGYFSPPVVKYASAHP-----DKIKKLILLNPPLTKEHAKLPSTLSEFSN--- 248 (383)
T ss_pred H-HHHHHHHHHh----CC--CCceEEEECHHHHHHHHHHHhCh-----HhhcEEEEECCCCccccccchHHHHHHHH---
Confidence 6 7787777765 22 38999999999999999999988 889999999987532110 000000000
Q ss_pred hhhhccCCcCChHHHHHhhccCCCCchHH--HHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHH-HHHHHHHHHHhCCcc
Q 011833 311 PIQALNVPVIPLGTFLAAIHPFASSPPYV--LSWLKFLISAPDMMHPELFEKLIFSNFGNIPTK-LISQLTTVFQEGGLC 387 (476)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 387 (476)
.++..++ ...+.. ...+. ......+..+....+........... .+..+...+.. .+.
T Consensus 249 -------------~l~~~~~---~~~~~~~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~-~l~ 309 (383)
T PLN03084 249 -------------FLLGEIF---SQDPLRASDKALT--SCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKK-ELK 309 (383)
T ss_pred -------------HHhhhhh---hcchHHHHhhhhc--ccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhc-ccc
Confidence 0000000 000000 00000 00111122222222211110000001 11111111110 111
Q ss_pred ccCCccccccc--CCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHH
Q 011833 388 DRSGTFFYKDH--IGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPC 465 (476)
Q Consensus 388 ~~~g~~~~~~~--l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~ 465 (476)
... ...... ..++++|||+|+|++|.+++.+.++++.+.. +. +++++ +++|| +...|.|+++.+.
T Consensus 310 ~~~--~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~~-~a--~l~vI-----p~aGH---~~~~E~Pe~v~~~ 376 (383)
T PLN03084 310 KYI--EEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKSS-QH--KLIEL-----PMAGH---HVQEDCGEELGGI 376 (383)
T ss_pred hhh--HHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHhc-CC--eEEEE-----CCCCC---CcchhCHHHHHHH
Confidence 000 001111 1468999999999999999999998888874 33 56776 89999 4457899999999
Q ss_pred HHHHHHh
Q 011833 466 IIEFLTR 472 (476)
Q Consensus 466 i~~fL~~ 472 (476)
|.+||.+
T Consensus 377 I~~Fl~~ 383 (383)
T PLN03084 377 ISGILSK 383 (383)
T ss_pred HHHHhhC
Confidence 9999864
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=190.23 Aligned_cols=279 Identities=16% Similarity=0.204 Sum_probs=158.4
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcce-eecCCCCCHHHHHHhCCCcEEEecCCCCCCccccccc
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIG-YDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEF 146 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~-~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~ 146 (476)
..++ ++||..+.+.+... +.....+|+||++||++++... |. ..++..|.++||+|+++|+||||.|.....
T Consensus 34 ~~~~-~~dg~~~~l~w~~~-~~~~~~~p~vll~HG~~g~~~~~~~----~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~- 106 (324)
T PRK10985 34 QRLE-LPDGDFVDLAWSED-PAQARHKPRLVLFHGLEGSFNSPYA----HGLLEAAQKRGWLGVVMHFRGCSGEPNRLH- 106 (324)
T ss_pred eEEE-CCCCCEEEEecCCC-CccCCCCCEEEEeCCCCCCCcCHHH----HHHHHHHHHCCCEEEEEeCCCCCCCccCCc-
Confidence 3455 68998877754322 2223357899999999876533 31 468889999999999999999997643110
Q ss_pred CccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccC
Q 011833 147 GEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKND 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
+.
T Consensus 107 -----------------------------------------~~------------------------------------- 108 (324)
T PRK10985 107 -----------------------------------------RI------------------------------------- 108 (324)
T ss_pred -----------------------------------------ce-------------------------------------
Confidence 00
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhh
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLL 306 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~ 306 (476)
|.... .+|+.+++++++++.+. .+++++||||||.+++.++++++ ....+.++|+++++.+.......+....
T Consensus 109 ~~~~~--~~D~~~~i~~l~~~~~~--~~~~~vG~S~GG~i~~~~~~~~~---~~~~~~~~v~i~~p~~~~~~~~~~~~~~ 181 (324)
T PRK10985 109 YHSGE--TEDARFFLRWLQREFGH--VPTAAVGYSLGGNMLACLLAKEG---DDLPLDAAVIVSAPLMLEACSYRMEQGF 181 (324)
T ss_pred ECCCc--hHHHHHHHHHHHHhCCC--CCEEEEEecchHHHHHHHHHhhC---CCCCccEEEEEcCCCCHHHHHHHHhhhH
Confidence 11111 36899999999887654 38999999999999888888764 1134899999999876543211110000
Q ss_pred cCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhC--
Q 011833 307 PLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEG-- 384 (476)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 384 (476)
. . .+ ...+.+.+... ....+.... .....+.+.+. ..+.+.+|.+.+...
T Consensus 182 ~--~---~~------~~~l~~~l~~~------~~~~~~~~~-~~~~~~~~~~~----------~~~~~~~fd~~~~~~~~ 233 (324)
T PRK10985 182 S--R---VY------QRYLLNLLKAN------AARKLAAYP-GTLPINLAQLK----------SVRRLREFDDLITARIH 233 (324)
T ss_pred H--H---HH------HHHHHHHHHHH------HHHHHHhcc-ccccCCHHHHh----------cCCcHHHHhhhheeccC
Confidence 0 0 00 00000000000 000000000 00001111110 011223333332211
Q ss_pred CccccC---CcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccC-Ccc
Q 011833 385 GLCDRS---GTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRL-AAY 460 (476)
Q Consensus 385 ~~~~~~---g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~-~~~ 460 (476)
.+.... ......+.+.++++|+|+|+|++|++++++....+.+..++ +.+.++ +++||+.++.+.- .+.
T Consensus 234 g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~--~~~~~~-----~~~GH~~~~~g~~~~~~ 306 (324)
T PRK10985 234 GFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPN--VEYQLT-----EHGGHVGFVGGTLLKPQ 306 (324)
T ss_pred CCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCC--eEEEEC-----CCCCceeeCCCCCCCCC
Confidence 111000 00111246789999999999999999999888877766664 466665 8999988875431 223
Q ss_pred -chhHHHHHHHHhh
Q 011833 461 -QVYPCIIEFLTRH 473 (476)
Q Consensus 461 -~v~~~i~~fL~~~ 473 (476)
-..+.+++|++..
T Consensus 307 ~w~~~~~~~~~~~~ 320 (324)
T PRK10985 307 MWLEQRIPDWLTTY 320 (324)
T ss_pred ccHHHHHHHHHHHh
Confidence 3446667998764
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.4e-21 Score=179.20 Aligned_cols=223 Identities=19% Similarity=0.327 Sum_probs=135.7
Q ss_pred EEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhhhHH
Q 011833 97 LLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLM 176 (476)
Q Consensus 97 VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 176 (476)
|||+||++++...| ..+++.|+ +||+|+++|+||+|.|......
T Consensus 1 vv~~hG~~~~~~~~-----~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~------------------------------ 44 (228)
T PF12697_consen 1 VVFLHGFGGSSESW-----DPLAEALA-RGYRVIAFDLPGHGRSDPPPDY------------------------------ 44 (228)
T ss_dssp EEEE-STTTTGGGG-----HHHHHHHH-TTSEEEEEECTTSTTSSSHSSG------------------------------
T ss_pred eEEECCCCCCHHHH-----HHHHHHHh-CCCEEEEEecCCcccccccccc------------------------------
Confidence 79999999999999 57999995 7999999999999999763310
Q ss_pred HHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEe
Q 011833 177 ETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLL 256 (476)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~ 256 (476)
..+++++++ +|+.++++.+ +. ++++
T Consensus 45 ------------------------------------------------~~~~~~~~~-~~l~~~l~~~----~~--~~~~ 69 (228)
T PF12697_consen 45 ------------------------------------------------SPYSIEDYA-EDLAELLDAL----GI--KKVI 69 (228)
T ss_dssp ------------------------------------------------SGGSHHHHH-HHHHHHHHHT----TT--SSEE
T ss_pred ------------------------------------------------CCcchhhhh-hhhhhccccc----cc--cccc
Confidence 124445555 5666666554 22 4899
Q ss_pred EEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCCh--hhHHHhhcCcchhhhccCCcCChHHHHHhhccCCC
Q 011833 257 AVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSN--SLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFAS 334 (476)
Q Consensus 257 lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (476)
++|||+||.+++.++.++| .+|+++|+++++....... .....+ +..+.....
T Consensus 70 lvG~S~Gg~~a~~~a~~~p-----~~v~~~vl~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~ 124 (228)
T PF12697_consen 70 LVGHSMGGMIALRLAARYP-----DRVKGLVLLSPPPPLPDSPSRSFGPSF--------------------IRRLLAWRS 124 (228)
T ss_dssp EEEETHHHHHHHHHHHHSG-----GGEEEEEEESESSSHHHHHCHHHHHHH--------------------HHHHHHHHH
T ss_pred ccccccccccccccccccc-----cccccceeecccccccccccccccchh--------------------hhhhhhccc
Confidence 9999999999999999988 7999999999987543211 000000 000000000
Q ss_pred C--chHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeC
Q 011833 335 S--PPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAAD 412 (476)
Q Consensus 335 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~ 412 (476)
. .......+.... ..+....+... ....+...+... . ....+...++++++|+++++|+
T Consensus 125 ~~~~~~~~~~~~~~~------~~~~~~~~~~~--------~~~~~~~~~~~~-~----~~~~~~~~~~~~~~pvl~i~g~ 185 (228)
T PF12697_consen 125 RSLRRLASRFFYRWF------DGDEPEDLIRS--------SRRALAEYLRSN-L----WQADLSEALPRIKVPVLVIHGE 185 (228)
T ss_dssp HHHHHHHHHHHHHHH------THHHHHHHHHH--------HHHHHHHHHHHH-H----HHHHHHHHHHGSSSEEEEEEET
T ss_pred ccccccccccccccc------ccccccccccc--------cccccccccccc-c----ccccccccccccCCCeEEeecC
Confidence 0 000000000000 11111111100 011111111100 0 0111224567789999999999
Q ss_pred CCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhH
Q 011833 413 QDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 413 ~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
+|.++|.+.++++.+.+++. +++++ +++||+.+ .+.|+++.+
T Consensus 186 ~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~~~p~~~~~ 227 (228)
T PF12697_consen 186 DDPIVPPESAEELADKLPNA--ELVVI-----PGAGHFLF---LEQPDEVAE 227 (228)
T ss_dssp TSSSSHHHHHHHHHHHSTTE--EEEEE-----TTSSSTHH---HHSHHHHHH
T ss_pred CCCCCCHHHHHHHHHHCCCC--EEEEE-----CCCCCccH---HHCHHHHhc
Confidence 99999999999999999864 77777 89999654 456666553
|
... |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.9e-20 Score=192.24 Aligned_cols=243 Identities=13% Similarity=0.086 Sum_probs=153.2
Q ss_pred CceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCc-ceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccc
Q 011833 65 DELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNA-IGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 65 ~e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~-~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~ 143 (476)
.+...+. ..||..|.++.+.|.. .++.|+||++||+.+.. ..| ..++..|+++||.|+++|+||+|.|.+.
T Consensus 168 ~e~v~i~-~~~g~~l~g~l~~P~~--~~~~P~Vli~gG~~~~~~~~~-----~~~~~~La~~Gy~vl~~D~pG~G~s~~~ 239 (414)
T PRK05077 168 LKELEFP-IPGGGPITGFLHLPKG--DGPFPTVLVCGGLDSLQTDYY-----RLFRDYLAPRGIAMLTIDMPSVGFSSKW 239 (414)
T ss_pred eEEEEEE-cCCCcEEEEEEEECCC--CCCccEEEEeCCcccchhhhH-----HHHHHHHHhCCCEEEEECCCCCCCCCCC
Confidence 3444555 4678789999887763 24567777777776654 446 4678899999999999999999998542
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
.. .
T Consensus 240 ~~-~---------------------------------------------------------------------------- 242 (414)
T PRK05077 240 KL-T---------------------------------------------------------------------------- 242 (414)
T ss_pred Cc-c----------------------------------------------------------------------------
Confidence 10 0
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHH
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLR 303 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~ 303 (476)
.+ ......++++++.+....+..++.++||||||.+++.++..+| .+|+++|+++++........ .
T Consensus 243 ---~d----~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p-----~ri~a~V~~~~~~~~~~~~~--~ 308 (414)
T PRK05077 243 ---QD----SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP-----PRLKAVACLGPVVHTLLTDP--K 308 (414)
T ss_pred ---cc----HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC-----cCceEEEEECCccchhhcch--h
Confidence 00 0112346788887765555579999999999999999998866 78999999998764211100 0
Q ss_pred HhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHh
Q 011833 304 LLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQE 383 (476)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (476)
. ++. .+......+...++.. ..+.+.+.. ....+
T Consensus 309 ~---------------------~~~------~p~~~~~~la~~lg~~-~~~~~~l~~----------------~l~~~-- 342 (414)
T PRK05077 309 R---------------------QQQ------VPEMYLDVLASRLGMH-DASDEALRV----------------ELNRY-- 342 (414)
T ss_pred h---------------------hhh------chHHHHHHHHHHhCCC-CCChHHHHH----------------Hhhhc--
Confidence 0 000 0000000000001100 011111110 00000
Q ss_pred CCccccCCccccccc-CCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccch
Q 011833 384 GGLCDRSGTFFYKDH-IGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQV 462 (476)
Q Consensus 384 ~~~~~~~g~~~~~~~-l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v 462 (476)
.+. .... ..++++|+|+|+|++|.++|++.++.+.+.+++. ++.++ |+..| .+.++++
T Consensus 343 -sl~-------~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~--~l~~i-----~~~~~------~e~~~~~ 401 (414)
T PRK05077 343 -SLK-------VQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADG--KLLEI-----PFKPV------YRNFDKA 401 (414)
T ss_pred -cch-------hhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCC--eEEEc-----cCCCc------cCCHHHH
Confidence 000 0011 2578999999999999999999999999989865 56666 66533 3567999
Q ss_pred hHHHHHHHHhh
Q 011833 463 YPCIIEFLTRH 473 (476)
Q Consensus 463 ~~~i~~fL~~~ 473 (476)
++.|++||+++
T Consensus 402 ~~~i~~wL~~~ 412 (414)
T PRK05077 402 LQEISDWLEDR 412 (414)
T ss_pred HHHHHHHHHHH
Confidence 99999999875
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.9e-20 Score=183.46 Aligned_cols=295 Identities=16% Similarity=0.164 Sum_probs=171.8
Q ss_pred CceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccc
Q 011833 65 DELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 65 ~e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
.+..++.+ .++..+......+. ...+.|+||+||+|+....|. .-...|++ .+.|+++|++|+|+|+++.
T Consensus 65 ~~~~~v~i-~~~~~iw~~~~~~~---~~~~~plVliHGyGAg~g~f~-----~Nf~~La~-~~~vyaiDllG~G~SSRP~ 134 (365)
T KOG4409|consen 65 YSKKYVRI-PNGIEIWTITVSNE---SANKTPLVLIHGYGAGLGLFF-----RNFDDLAK-IRNVYAIDLLGFGRSSRPK 134 (365)
T ss_pred cceeeeec-CCCceeEEEeeccc---ccCCCcEEEEeccchhHHHHH-----Hhhhhhhh-cCceEEecccCCCCCCCCC
Confidence 44556663 34444444433332 246899999999999998884 45566776 7999999999999998865
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
-.. + + +.
T Consensus 135 F~~--------------------------------------------d------~----------~~------------- 141 (365)
T KOG4409|consen 135 FSI--------------------------------------------D------P----------TT------------- 141 (365)
T ss_pred CCC--------------------------------------------C------c----------cc-------------
Confidence 310 0 0 00
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHH
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRL 304 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~ 304 (476)
...-..+-|+..+...+.. |++||||||||+++..||.+|| ++|+.+++++|.............
T Consensus 142 --------~e~~fvesiE~WR~~~~L~--KmilvGHSfGGYLaa~YAlKyP-----erV~kLiLvsP~Gf~~~~~~~~~~ 206 (365)
T KOG4409|consen 142 --------AEKEFVESIEQWRKKMGLE--KMILVGHSFGGYLAAKYALKYP-----ERVEKLILVSPWGFPEKPDSEPEF 206 (365)
T ss_pred --------chHHHHHHHHHHHHHcCCc--ceeEeeccchHHHHHHHHHhCh-----HhhceEEEecccccccCCCcchhh
Confidence 0122333455556666665 9999999999999999999999 899999999986543322100000
Q ss_pred hhcCcchhhhc--cCCcCChHHHHHhhccCCCCchHHHHHHHHhhc-CCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHH
Q 011833 305 LLPLSDPIQAL--NVPVIPLGTFLAAIHPFASSPPYVLSWLKFLIS-APDMMHPELFEKLIFSNFGNIPTKLISQLTTVF 381 (476)
Q Consensus 305 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (476)
..+........ ....+-.-..++.+.++-. ..+..|....+. .+.....+.+-.|+..... .....-..+..++
T Consensus 207 ~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp--~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~-~~psgE~~fk~l~ 283 (365)
T KOG4409|consen 207 TKPPPEWYKALFLVATNFNPLALLRLMGPLGP--KLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNA-QNPSGETAFKNLF 283 (365)
T ss_pred cCCChHHHhhhhhhhhcCCHHHHHHhccccch--HHHhhhhHHHHHhccccchhHHHHHHHHHhcC-CCCcHHHHHHHHH
Confidence 00000000000 0001111122333333221 111122222222 2223344444455544432 2223334455566
Q ss_pred HhCCccccCCcccccccCCCC--cccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCc
Q 011833 382 QEGGLCDRSGTFFYKDHIGKT--NVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAA 459 (476)
Q Consensus 382 ~~~~~~~~~g~~~~~~~l~~i--~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~ 459 (476)
..+.++.. -..+.+..+ +|||++|+|++|++- .....++.+.+....++++++ |++||.-+ .++|
T Consensus 284 ~~~g~Ar~----Pm~~r~~~l~~~~pv~fiyG~~dWmD-~~~g~~~~~~~~~~~~~~~~v-----~~aGHhvy---lDnp 350 (365)
T KOG4409|consen 284 EPGGWARR----PMIQRLRELKKDVPVTFIYGDRDWMD-KNAGLEVTKSLMKEYVEIIIV-----PGAGHHVY---LDNP 350 (365)
T ss_pred hccchhhh----hHHHHHHhhccCCCEEEEecCccccc-chhHHHHHHHhhcccceEEEe-----cCCCceee---cCCH
Confidence 65555431 112234444 599999999999775 555666666655555678877 99999444 7899
Q ss_pred cchhHHHHHHHHhh
Q 011833 460 YQVYPCIIEFLTRH 473 (476)
Q Consensus 460 ~~v~~~i~~fL~~~ 473 (476)
+.+.+.++++++..
T Consensus 351 ~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 351 EFFNQIVLEECDKV 364 (365)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999999753
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.9e-20 Score=189.73 Aligned_cols=254 Identities=21% Similarity=0.257 Sum_probs=147.0
Q ss_pred CceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccc
Q 011833 75 SDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITS 154 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~ 154 (476)
++..+.+..+.+ +.+++|||+||++++...| ..+...|.+ +|+|+++|+||||.|.....
T Consensus 117 ~~~~i~~~~~g~-----~~~~~vl~~HG~~~~~~~~-----~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~--------- 176 (371)
T PRK14875 117 GGRTVRYLRLGE-----GDGTPVVLIHGFGGDLNNW-----LFNHAALAA-GRPVIALDLPGHGASSKAVG--------- 176 (371)
T ss_pred cCcEEEEecccC-----CCCCeEEEECCCCCccchH-----HHHHHHHhc-CCEEEEEcCCCCCCCCCCCC---------
Confidence 566665544321 2368999999999999888 477777765 59999999999999854221
Q ss_pred cccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhh
Q 011833 155 ANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLE 234 (476)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (476)
.++++++.
T Consensus 177 -----------------------------------------------------------------------~~~~~~~~- 184 (371)
T PRK14875 177 -----------------------------------------------------------------------AGSLDELA- 184 (371)
T ss_pred -----------------------------------------------------------------------CCCHHHHH-
Confidence 12233333
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh-hHHHhhcCcchhh
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS-LLRLLLPLSDPIQ 313 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~-~~~~~~~~~~~~~ 313 (476)
+++..+++ ..+. .+++++||||||.+++.++..+| .+++++|++++......... ....+..
T Consensus 185 ~~~~~~~~----~~~~--~~~~lvG~S~Gg~~a~~~a~~~~-----~~v~~lv~~~~~~~~~~~~~~~~~~~~~------ 247 (371)
T PRK14875 185 AAVLAFLD----ALGI--ERAHLVGHSMGGAVALRLAARAP-----QRVASLTLIAPAGLGPEINGDYIDGFVA------ 247 (371)
T ss_pred HHHHHHHH----hcCC--ccEEEEeechHHHHHHHHHHhCc-----hheeEEEEECcCCcCcccchhHHHHhhc------
Confidence 44444443 3333 38999999999999999998876 78999999987643221110 0110100
Q ss_pred hccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcc
Q 011833 314 ALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTF 393 (476)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 393 (476)
. .....+..++......+..........+............+..+......... ...
T Consensus 248 ------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 304 (371)
T PRK14875 248 ------------------A-ESRRELKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGR----QRV 304 (371)
T ss_pred ------------------c-cchhHHHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcc----cch
Confidence 0 00001111222222211122222222221111001111111111111111100 112
Q ss_pred cccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 394 FYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 394 ~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
.+...+.++++|+|+++|++|.++|++..+.+. . ...++++ +++||+.+ .+.++++.+.|.+||+++
T Consensus 305 ~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~----~-~~~~~~~-----~~~gH~~~---~e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 305 DLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP----D-GVAVHVL-----PGAGHMPQ---MEAAADVNRLLAEFLGKA 371 (371)
T ss_pred hHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc----C-CCeEEEe-----CCCCCChh---hhCHHHHHHHHHHHhccC
Confidence 333467789999999999999999988765443 2 2466776 89999544 678899999999999764
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-20 Score=192.10 Aligned_cols=69 Identities=19% Similarity=0.279 Sum_probs=58.4
Q ss_pred cCCCCcccEEEEeeCCCCcCCHHHHHHHHHhc-CCCceeEEEecCCCCC-CCcccccccccCCccchhHHHHHHHHhhcC
Q 011833 398 HIGKTNVPVLALAADQDLICPTEAVYETVKLI-PEHLVSFKVFGEPRGP-HYAHYDLVGSRLAAYQVYPCIIEFLTRHDM 475 (476)
Q Consensus 398 ~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l-~~~~~~~~v~~~~~~~-~~gH~~~~~~~~~~~~v~~~i~~fL~~~~~ 475 (476)
.+.++++|+|+|+|++|.++|++.++++.+.+ ++. ++.++ + ++||..+ .|.|++|.+.|.+||++...
T Consensus 272 ~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a--~l~~i-----~~~aGH~~~---lE~Pe~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 272 DPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRG--SLRVL-----RSPYGHDAF---LKETDRIDAILTTALRSTGE 341 (343)
T ss_pred ChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCC--eEEEE-----eCCccHHHH---hcCHHHHHHHHHHHHHhccc
Confidence 46789999999999999999999999999988 454 67776 6 4999554 78899999999999988655
Q ss_pred C
Q 011833 476 T 476 (476)
Q Consensus 476 ~ 476 (476)
|
T Consensus 342 ~ 342 (343)
T PRK08775 342 T 342 (343)
T ss_pred c
Confidence 4
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.7e-20 Score=183.25 Aligned_cols=279 Identities=19% Similarity=0.263 Sum_probs=172.6
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCc-ceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNA-IGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~-~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
++..+. ++||..+.+.+..+.. ...+|.||++||+.+++ +.|. +.+++.+.++||.|+++|+|||+.+..
T Consensus 50 ~re~v~-~pdg~~~~ldw~~~p~--~~~~P~vVl~HGL~G~s~s~y~----r~L~~~~~~rg~~~Vv~~~Rgcs~~~n-- 120 (345)
T COG0429 50 TRERLE-TPDGGFIDLDWSEDPR--AAKKPLVVLFHGLEGSSNSPYA----RGLMRALSRRGWLVVVFHFRGCSGEAN-- 120 (345)
T ss_pred ceEEEE-cCCCCEEEEeeccCcc--ccCCceEEEEeccCCCCcCHHH----HHHHHHHHhcCCeEEEEecccccCCcc--
Confidence 344566 6787777665554322 23568999999995444 4454 688899999999999999999998754
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
+.++++++|
T Consensus 121 ----------------------------------------~~p~~yh~G------------------------------- 129 (345)
T COG0429 121 ----------------------------------------TSPRLYHSG------------------------------- 129 (345)
T ss_pred ----------------------------------------cCcceeccc-------------------------------
Confidence 446677776
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHH
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRL 304 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~ 304 (476)
..+|+..++++++++... .|+..||.|+||.+...+.++.. .+..+.+.++++.+.++......+..
T Consensus 130 --------~t~D~~~~l~~l~~~~~~--r~~~avG~SLGgnmLa~ylgeeg---~d~~~~aa~~vs~P~Dl~~~~~~l~~ 196 (345)
T COG0429 130 --------ETEDIRFFLDWLKARFPP--RPLYAVGFSLGGNMLANYLGEEG---DDLPLDAAVAVSAPFDLEACAYRLDS 196 (345)
T ss_pred --------chhHHHHHHHHHHHhCCC--CceEEEEecccHHHHHHHHHhhc---cCcccceeeeeeCHHHHHHHHHHhcC
Confidence 247999999999887655 49999999999988888887643 45778888988888876432111100
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHH-HHHHhhhccCCCCHHHHHHHHHHHHh
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPEL-FEKLIFSNFGNIPTKLISQLTTVFQE 383 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (476)
-... .+=...+++.+.+. +...+..+ +...+.. ...+ ...+.+.+|..+++.
T Consensus 197 ~~s~----------~ly~r~l~~~L~~~------~~~kl~~l----~~~~p~~~~~~i-------k~~~ti~eFD~~~Ta 249 (345)
T COG0429 197 GFSL----------RLYSRYLLRNLKRN------AARKLKEL----EPSLPGTVLAAI-------KRCRTIREFDDLLTA 249 (345)
T ss_pred chhh----------hhhHHHHHHHHHHH------HHHHHHhc----CcccCcHHHHHH-------HhhchHHhccceeee
Confidence 0000 00000000000000 00111111 0000000 1100 011334445444442
Q ss_pred C--CccccCCccccc------ccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccc
Q 011833 384 G--GLCDRSGTFFYK------DHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGS 455 (476)
Q Consensus 384 ~--~~~~~~g~~~~~------~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~ 455 (476)
. ++.+ ..+|. ..+.+|.+|+|||++.+|++++++.+.+.....+. .+.+.+- ++.||++++.+
T Consensus 250 p~~Gf~d---a~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np-~v~l~~t-----~~GGHvGfl~~ 320 (345)
T COG0429 250 PLHGFAD---AEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNP-NVLLQLT-----EHGGHVGFLGG 320 (345)
T ss_pred cccCCCc---HHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCC-ceEEEee-----cCCceEEeccC
Confidence 2 2221 12221 37899999999999999999999988887775443 4677765 79999999876
Q ss_pred cCCcc--chhHHHHHHHHhh
Q 011833 456 RLAAY--QVYPCIIEFLTRH 473 (476)
Q Consensus 456 ~~~~~--~v~~~i~~fL~~~ 473 (476)
..... -..+.|.+||+..
T Consensus 321 ~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 321 KLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred ccccchhhHHHHHHHHHHHH
Confidence 44323 3447778999865
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.7e-19 Score=185.75 Aligned_cols=69 Identities=12% Similarity=0.058 Sum_probs=53.7
Q ss_pred cccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 396 KDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 396 ~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
.+.+.++++|+++|+|++|.+++ ....++.+.++. ..+++++ +++||+.+ .|.|++|++.+.+|++.+.
T Consensus 318 ~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~-~~~~~~i-----~~aGH~~~---~E~P~~f~~~l~~~~~~~~ 386 (402)
T PLN02894 318 LESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKV-PCEIIRV-----PQGGHFVF---LDNPSGFHSAVLYACRKYL 386 (402)
T ss_pred hhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCC-CCcEEEe-----CCCCCeee---ccCHHHHHHHHHHHHHHhc
Confidence 34678899999999999998875 556666666643 2467776 89999554 7889999999999988753
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=180.11 Aligned_cols=250 Identities=13% Similarity=0.219 Sum_probs=143.6
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
.+|+|||+||++.+...| ..+...|.++||+|+++|+||||.|.....
T Consensus 17 ~~p~vvliHG~~~~~~~w-----~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~--------------------------- 64 (273)
T PLN02211 17 QPPHFVLIHGISGGSWCW-----YKIRCLMENSGYKVTCIDLKSAGIDQSDAD--------------------------- 64 (273)
T ss_pred CCCeEEEECCCCCCcCcH-----HHHHHHHHhCCCEEEEecccCCCCCCCCcc---------------------------
Confidence 468999999999999999 588899988999999999999998743211
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
..+++++++ +++.++++.+ .+ .
T Consensus 65 ----------------------------------------------------~~~~~~~~~-~~l~~~i~~l---~~--~ 86 (273)
T PLN02211 65 ----------------------------------------------------SVTTFDEYN-KPLIDFLSSL---PE--N 86 (273)
T ss_pred ----------------------------------------------------cCCCHHHHH-HHHHHHHHhc---CC--C
Confidence 013445544 4554444432 11 2
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccC
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPF 332 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (476)
+++++|||||||.+++.++.++| ++|+++|++++....... +....... ..+...........
T Consensus 87 ~~v~lvGhS~GG~v~~~~a~~~p-----~~v~~lv~~~~~~~~~g~-~~~~~~~~-----------~~~~~~~~~~~~~~ 149 (273)
T PLN02211 87 EKVILVGHSAGGLSVTQAIHRFP-----KKICLAVYVAATMLKLGF-QTDEDMKD-----------GVPDLSEFGDVYEL 149 (273)
T ss_pred CCEEEEEECchHHHHHHHHHhCh-----hheeEEEEeccccCCCCC-CHHHHHhc-----------cccchhhhccceee
Confidence 48999999999999999998887 789999999874321100 00000000 00000000000000
Q ss_pred CCCchHHHHHHHHhhc--CCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCC-cccEEEE
Q 011833 333 ASSPPYVLSWLKFLIS--APDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKT-NVPVLAL 409 (476)
Q Consensus 333 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i-~vPvLii 409 (476)
.+...... ......++....++.+ ..+......+............ ......+...++ ++|+++|
T Consensus 150 --------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~vP~l~I 217 (273)
T PLN02211 150 --------GFGLGPDQPPTSAIIKKEFRRKILYQ---MSPQEDSTLAAMLLRPGPILAL-RSARFEEETGDIDKVPRVYI 217 (273)
T ss_pred --------eeccCCCCCCceeeeCHHHHHHHHhc---CCCHHHHHHHHHhcCCcCcccc-ccccccccccccCccceEEE
Confidence 00000000 0000112222222211 2222222222111111111100 011111233455 7999999
Q ss_pred eeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 410 AADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 410 ~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
+|++|..+|++..+.+.+.++.. +++.+ + +||..+ .+.|+++.+.|.++...
T Consensus 218 ~g~~D~~ip~~~~~~m~~~~~~~--~~~~l-----~-~gH~p~---ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 218 KTLHDHVVKPEQQEAMIKRWPPS--QVYEL-----E-SDHSPF---FSTPFLLFGLLIKAAAS 269 (273)
T ss_pred EeCCCCCCCHHHHHHHHHhCCcc--EEEEE-----C-CCCCcc---ccCHHHHHHHHHHHHHH
Confidence 99999999999999999999865 56665 4 899665 68899999999887654
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-19 Score=185.63 Aligned_cols=68 Identities=21% Similarity=0.334 Sum_probs=57.0
Q ss_pred cccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeE---EEecCCCCCCCcccccccccCCccchhHHHHHHHH
Q 011833 396 KDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSF---KVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLT 471 (476)
Q Consensus 396 ~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~---~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~ 471 (476)
.+.+++|++|+|+|+|++|.++|++.++++.+.+++....+ .++ +++||..+ .+.++++.+.|.+||+
T Consensus 281 ~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~-----~~~GH~~~---le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 281 TEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIE-----SPYGHDAF---LVETDQVEELIRGFLR 351 (351)
T ss_pred HHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeC-----CCCCcchh---hcCHHHHHHHHHHHhC
Confidence 45788999999999999999999999999999999864322 133 68999655 6889999999999984
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.3e-19 Score=177.60 Aligned_cols=63 Identities=25% Similarity=0.441 Sum_probs=49.9
Q ss_pred ccCCCC-cccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 397 DHIGKT-NVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 397 ~~l~~i-~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
+.+.++ ++|+|+|+|++|.++|.+.++++.+.+++. +++++ +++||..+ .+...+.|++|++.
T Consensus 241 ~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~------~~~~~~~i~~~~~~ 304 (306)
T TIGR01249 241 DNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEA--ELKVT-----NNAGHSAF------DPNNLAALVHALET 304 (306)
T ss_pred HhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCC--EEEEE-----CCCCCCCC------ChHHHHHHHHHHHH
Confidence 456677 699999999999999999999999999865 67776 89999543 24466777777654
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-19 Score=186.63 Aligned_cols=73 Identities=18% Similarity=0.228 Sum_probs=60.5
Q ss_pred ccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCc--eeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 395 YKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHL--VSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 395 ~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
+.+.+++|++|+|+|+|++|.++|++.++++.+.+++.. +++.++ .+++||+.+ .+.|+++.+.|.+||++
T Consensus 301 ~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i----~~~~GH~~~---le~p~~~~~~L~~FL~~ 373 (379)
T PRK00175 301 LAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEI----DSPYGHDAF---LLDDPRYGRLVRAFLER 373 (379)
T ss_pred HHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEe----CCCCCchhH---hcCHHHHHHHHHHHHHh
Confidence 345788999999999999999999999999999998753 245554 138999665 68889999999999987
Q ss_pred hc
Q 011833 473 HD 474 (476)
Q Consensus 473 ~~ 474 (476)
..
T Consensus 374 ~~ 375 (379)
T PRK00175 374 AA 375 (379)
T ss_pred hh
Confidence 64
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.6e-19 Score=172.19 Aligned_cols=229 Identities=16% Similarity=0.223 Sum_probs=137.8
Q ss_pred EEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCC
Q 011833 82 WRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTG 161 (476)
Q Consensus 82 ~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g 161 (476)
.+|.|...+.++.|+||++||++++...| ..+++.|+++||.|+++|+||+|.|.....
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~---------------- 73 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLVY-----SYFAVALAQAGFRVIMPDAPMHGARFSGDE---------------- 73 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccchH-----HHHHHHHHhCCCEEEEecCCcccccCCCcc----------------
Confidence 34445433234568999999999988777 578999999999999999999997632110
Q ss_pred CcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHH
Q 011833 162 GTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVM 241 (476)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i 241 (476)
.....+| |..-....+|+.+++
T Consensus 74 -----------------------------------------------~~~~~~~-----------~~~~~~~~~~~~~~~ 95 (249)
T PRK10566 74 -----------------------------------------------ARRLNHF-----------WQILLQNMQEFPTLR 95 (249)
T ss_pred -----------------------------------------------ccchhhH-----------HHHHHHHHHHHHHHH
Confidence 0000000 101111236788888
Q ss_pred HHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCC
Q 011833 242 EYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIP 321 (476)
Q Consensus 242 ~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (476)
+++++....+.++++++||||||.+++.++.++| .+++.+.+.....+.. ..+
T Consensus 96 ~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~------~~~~~~~~~~~~~~~~---~~~------------------ 148 (249)
T PRK10566 96 AAIREEGWLLDDRLAVGGASMGGMTALGIMARHP------WVKCVASLMGSGYFTS---LAR------------------ 148 (249)
T ss_pred HHHHhcCCcCccceeEEeecccHHHHHHHHHhCC------CeeEEEEeeCcHHHHH---HHH------------------
Confidence 9988765455569999999999999999988865 2444443322111000 000
Q ss_pred hHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCC
Q 011833 322 LGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGK 401 (476)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~ 401 (476)
..++... ...+ ... ..+..+...+. .++..+.+.+
T Consensus 149 ------~~~~~~~------------~~~~--~~~----------------~~~~~~~~~~~---------~~~~~~~~~~ 183 (249)
T PRK10566 149 ------TLFPPLI------------PETA--AQQ----------------AEFNNIVAPLA---------EWEVTHQLEQ 183 (249)
T ss_pred ------Hhccccc------------cccc--ccH----------------HHHHHHHHHHh---------hcChhhhhhh
Confidence 0000000 0000 000 00000000000 0111124556
Q ss_pred C-cccEEEEeeCCCCcCCHHHHHHHHHhcCCCc----eeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 402 T-NVPVLALAADQDLICPTEAVYETVKLIPEHL----VSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 402 i-~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~----~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
+ ++|+|+++|++|.++|++.++++.+.++... +.++++ ++.||. .. ......+++||+++
T Consensus 184 i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~-----~~~~H~---~~----~~~~~~~~~fl~~~ 248 (249)
T PRK10566 184 LADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWE-----PGVRHR---IT----PEALDAGVAFFRQH 248 (249)
T ss_pred cCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEec-----CCCCCc---cC----HHHHHHHHHHHHhh
Confidence 5 7999999999999999999999999886542 355554 899993 11 45789999999875
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-19 Score=184.82 Aligned_cols=67 Identities=27% Similarity=0.314 Sum_probs=59.1
Q ss_pred cCCCCc-ccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 398 HIGKTN-VPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 398 ~l~~i~-vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
.+.++. +|+|++||++|.++|.+.++++.+++++. ++.++ +++|| ..+.+.|+.+.+.|..|+.++.
T Consensus 258 ~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~--~~~~I-----~~~gH---~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 258 LIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNA--ELVEI-----PGAGH---LPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred hhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCc--eEEEe-----CCCCc---ccccCCHHHHHHHHHHHHHHhc
Confidence 566666 99999999999999999999999999765 77777 89999 5668999999999999998764
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.81 E-value=9e-19 Score=174.25 Aligned_cols=123 Identities=16% Similarity=0.179 Sum_probs=91.2
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCc----ceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNA----IGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGE 148 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~----~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~ 148 (476)
..+|..|.++.+.|... .+++||++||..... ..| ..+++.|+++||.|+++|+||||.|.+..
T Consensus 8 ~~~~~~l~g~~~~p~~~---~~~~vv~i~gg~~~~~g~~~~~-----~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---- 75 (274)
T TIGR03100 8 SCEGETLVGVLHIPGAS---HTTGVLIVVGGPQYRVGSHRQF-----VLLARRLAEAGFPVLRFDYRGMGDSEGEN---- 75 (274)
T ss_pred EcCCcEEEEEEEcCCCC---CCCeEEEEeCCccccCCchhHH-----HHHHHHHHHCCCEEEEeCCCCCCCCCCCC----
Confidence 45788898888877643 346778778764322 223 35788999999999999999999985321
Q ss_pred cccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCC
Q 011833 149 DSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWD 228 (476)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (476)
++
T Consensus 76 ------------------------------------------------------------------------------~~ 77 (274)
T TIGR03100 76 ------------------------------------------------------------------------------LG 77 (274)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 12
Q ss_pred chhhhhccHHHHHHHHHHHh-CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 229 FDHYLEEDVPAVMEYIRTLS-KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 229 ~~~~~~~Dl~a~i~~l~~~~-~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
++++. +|+.++++++++.. +. ++++++||||||.+++.++.. + .+|+++|+++|...
T Consensus 78 ~~~~~-~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~-~-----~~v~~lil~~p~~~ 135 (274)
T TIGR03100 78 FEGID-ADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPA-D-----LRVAGLVLLNPWVR 135 (274)
T ss_pred HHHHH-HHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhh-C-----CCccEEEEECCccC
Confidence 23333 79999999998764 33 379999999999999988754 2 57999999998753
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.7e-19 Score=193.20 Aligned_cols=249 Identities=17% Similarity=0.187 Sum_probs=165.7
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCC-CcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRN-HPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~-~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
|...+. ..||.++.+|.+.|.+..+.++ |.||++||.+.....|. .....+.|+++||.|+.+|+||.+.
T Consensus 366 e~~~~~-~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~---~~~~~q~~~~~G~~V~~~n~RGS~G----- 436 (620)
T COG1506 366 EPVTYK-SNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYS---FNPEIQVLASAGYAVLAPNYRGSTG----- 436 (620)
T ss_pred eEEEEE-cCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccc---cchhhHHHhcCCeEEEEeCCCCCCc-----
Confidence 334454 6799999999999987654443 78999999976655532 2577889999999999999999753
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
++..|.....
T Consensus 437 -----------------yG~~F~~~~~----------------------------------------------------- 446 (620)
T COG1506 437 -----------------YGREFADAIR----------------------------------------------------- 446 (620)
T ss_pred -----------------cHHHHHHhhh-----------------------------------------------------
Confidence 2222222210
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHH
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRL 304 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~ 304 (476)
-.+.....+|+.++++++.+....+.+|+++.|||+||.+++.++.+. ..+++.+...+..+.....
T Consensus 447 --~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~------~~f~a~~~~~~~~~~~~~~----- 513 (620)
T COG1506 447 --GDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKT------PRFKAAVAVAGGVDWLLYF----- 513 (620)
T ss_pred --hccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcC------chhheEEeccCcchhhhhc-----
Confidence 112222347999999988777667668999999999999999999884 3577887777655422110
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhC
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEG 384 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (476)
..+...+...+. .....+.. +.+.+.+.
T Consensus 514 ---------------------------~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~----------------------- 541 (620)
T COG1506 514 ---------------------------GESTEGLRFDPE-ENGGGPPE-DREKYEDR----------------------- 541 (620)
T ss_pred ---------------------------cccchhhcCCHH-HhCCCccc-ChHHHHhc-----------------------
Confidence 000000000000 00000000 12222111
Q ss_pred CccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccch
Q 011833 385 GLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQV 462 (476)
Q Consensus 385 ~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v 462 (476)
.-..++.++++|+|+|||++|..||.+++..+++++... .++++++ |+.+|. +...++...+
T Consensus 542 ---------sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~-----p~e~H~--~~~~~~~~~~ 605 (620)
T COG1506 542 ---------SPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVF-----PDEGHG--FSRPENRVKV 605 (620)
T ss_pred ---------ChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEe-----CCCCcC--CCCchhHHHH
Confidence 001267889999999999999999999999999988643 4566776 999993 2335666789
Q ss_pred hHHHHHHHHhhc
Q 011833 463 YPCIIEFLTRHD 474 (476)
Q Consensus 463 ~~~i~~fL~~~~ 474 (476)
+..+++|++++-
T Consensus 606 ~~~~~~~~~~~~ 617 (620)
T COG1506 606 LKEILDWFKRHL 617 (620)
T ss_pred HHHHHHHHHHHh
Confidence 999999999874
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.6e-18 Score=172.82 Aligned_cols=292 Identities=22% Similarity=0.330 Sum_probs=200.4
Q ss_pred EEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccc
Q 011833 79 LALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAK 158 (476)
Q Consensus 79 L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 158 (476)
+.+.+|.|... ..-++|+|++|-+......||+.|.++++++|.++|++|+.+++++-..+..
T Consensus 93 ~~liqy~p~~e-~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~---------------- 155 (445)
T COG3243 93 LELIQYKPLTE-KVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA---------------- 155 (445)
T ss_pred hhhhccCCCCC-ccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh----------------
Confidence 44556666544 3357899999999999999999999999999999999999999998765522
Q ss_pred cCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHH
Q 011833 159 STGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVP 238 (476)
Q Consensus 159 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 238 (476)
.+++++|+.+++.
T Consensus 156 -------------------------------------------------------------------~~~~edYi~e~l~ 168 (445)
T COG3243 156 -------------------------------------------------------------------AKNLEDYILEGLS 168 (445)
T ss_pred -------------------------------------------------------------------hccHHHHHHHHHH
Confidence 3678999999999
Q ss_pred HHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcC---cc-hhhh
Q 011833 239 AVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPL---SD-PIQA 314 (476)
Q Consensus 239 a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~---~~-~~~~ 314 (476)
.+++.+++.++++ +|.++|||+||.++..+++.++ ..+|++++++.++.|+..... +..+... .. ..+.
T Consensus 169 ~aid~v~~itg~~--~InliGyCvGGtl~~~ala~~~----~k~I~S~T~lts~~DF~~~g~-l~if~n~~~~~~~~~~i 241 (445)
T COG3243 169 EAIDTVKDITGQK--DINLIGYCVGGTLLAAALALMA----AKRIKSLTLLTSPVDFSHAGD-LGIFANEATIEALDADI 241 (445)
T ss_pred HHHHHHHHHhCcc--ccceeeEecchHHHHHHHHhhh----hcccccceeeecchhhccccc-cccccCHHHHHHHHhhh
Confidence 9999999999876 8999999999999999999987 336999999999998876431 1111110 00 0011
Q ss_pred ccCCcCChHHHHHhhccCCCCchHHHH-HHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHH-HHHhCCccccCCc
Q 011833 315 LNVPVIPLGTFLAAIHPFASSPPYVLS-WLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTT-VFQEGGLCDRSGT 392 (476)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~ 392 (476)
.....+| +..++..|.++....++.. ++..+......+. -.+..+..++ ...|.....++.+ .+.+..+.. |.
T Consensus 242 ~~~g~lp-g~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~-fdllyWn~ds-t~~~~~~~~~~Lrn~y~~N~l~~--g~ 316 (445)
T COG3243 242 VQKGILP-GWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLP-FDLLYWNADS-TRLPGAAHSEYLRNFYLENRLIR--GG 316 (445)
T ss_pred hhccCCC-hHHHHHHHHhcCccccchHHHHHHhcCCCCCCc-hhHHHhhCCC-ccCchHHHHHHHHHHHHhChhhc--cc
Confidence 1112333 3444555555554444333 3333333333222 2222333333 3667777776653 333333332 22
Q ss_pred cccc---ccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccc--cCCccchhH---
Q 011833 393 FFYK---DHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGS--RLAAYQVYP--- 464 (476)
Q Consensus 393 ~~~~---~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~--~~~~~~v~~--- 464 (476)
+... -.+++|+||++++.|++|.|+|++.+....+.+++ .+++... +.||...+.+ .....+.+.
T Consensus 317 ~~v~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g-~~~f~l~------~sGHIa~vVN~p~~~k~~~w~n~~ 389 (445)
T COG3243 317 LEVSGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGG-EVTFVLS------RSGHIAGVVNPPGNAKYQYWTNLP 389 (445)
T ss_pred eEECCEEechhhcccceEEEeecccccCCHHHHHHHHHhcCC-ceEEEEe------cCceEEEEeCCcchhhhhcCCCCc
Confidence 2222 27899999999999999999999999999999987 5677764 8999888877 333345555
Q ss_pred -HHHHHHHhh
Q 011833 465 -CIIEFLTRH 473 (476)
Q Consensus 465 -~i~~fL~~~ 473 (476)
.+.+||...
T Consensus 390 ~~~~~Wl~~a 399 (445)
T COG3243 390 ADAEAWLSGA 399 (445)
T ss_pred chHHHHHHhh
Confidence 677777653
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.79 E-value=6e-18 Score=203.23 Aligned_cols=261 Identities=15% Similarity=0.206 Sum_probs=148.3
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
.+++|||+||++++...| ..++..|.+ +|+|+++|+||||.|.......
T Consensus 1370 ~~~~vVllHG~~~s~~~w-----~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~------------------------- 1418 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDW-----IPIMKAISG-SARCISIDLPGHGGSKIQNHAK------------------------- 1418 (1655)
T ss_pred CCCeEEEECCCCCCHHHH-----HHHHHHHhC-CCEEEEEcCCCCCCCCCccccc-------------------------
Confidence 468999999999999999 578888865 5999999999999986422100
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
.+ . ....+++++++ +|+.++++.+ +.
T Consensus 1419 ------------------~~-------------------~----------~~~~~si~~~a-~~l~~ll~~l----~~-- 1444 (1655)
T PLN02980 1419 ------------------ET-------------------Q----------TEPTLSVELVA-DLLYKLIEHI----TP-- 1444 (1655)
T ss_pred ------------------cc-------------------c----------ccccCCHHHHH-HHHHHHHHHh----CC--
Confidence 00 0 00124455555 5666665543 33
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccC
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPF 332 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (476)
++++++||||||.+++.++.++| .+|+++|++++...+..... ...... ... .....+..
T Consensus 1445 ~~v~LvGhSmGG~iAl~~A~~~P-----~~V~~lVlis~~p~~~~~~~-~~~~~~-~~~------------~~~~~l~~- 1504 (1655)
T PLN02980 1445 GKVTLVGYSMGARIALYMALRFS-----DKIEGAVIISGSPGLKDEVA-RKIRSA-KDD------------SRARMLID- 1504 (1655)
T ss_pred CCEEEEEECHHHHHHHHHHHhCh-----HhhCEEEEECCCCccCchHH-HHHHhh-hhh------------HHHHHHHh-
Confidence 48999999999999999999988 88999999986543322110 000000 000 00000000
Q ss_pred CCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeC
Q 011833 333 ASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAAD 412 (476)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~ 412 (476)
.....+...|............+. +......................+..+ ...+..+.+.++++|+|+|+|+
T Consensus 1505 ~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~dl~~~L~~I~~PtLlI~Ge 1577 (1655)
T PLN02980 1505 HGLEIFLENWYSGELWKSLRNHPH-FNKIVASRLLHKDVPSLAKLLSDLSIG------RQPSLWEDLKQCDTPLLLVVGE 1577 (1655)
T ss_pred hhHHHHHHHhccHHHhhhhccCHH-HHHHHHHHHhcCCHHHHHHHHHHhhhc------ccchHHHHHhhCCCCEEEEEEC
Confidence 000001111111100000000111 111111000011111111111111000 0112235688999999999999
Q ss_pred CCCcCCHHHHHHHHHhcCCC----------ceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 413 QDLICPTEAVYETVKLIPEH----------LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 413 ~D~~vp~~~~~~~~~~l~~~----------~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
+|.+++ +.++++.+.+++. .++++++ +++||..+ .+.|+.+.+.|.+||++.+
T Consensus 1578 ~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI-----~~aGH~~~---lE~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1578 KDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEI-----PNCGHAVH---LENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred CCCccH-HHHHHHHHHccccccccccccccceEEEEE-----CCCCCchH---HHCHHHHHHHHHHHHHhcc
Confidence 999885 6677788888763 1467777 99999544 7889999999999999764
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-17 Score=171.75 Aligned_cols=294 Identities=16% Similarity=0.188 Sum_probs=190.0
Q ss_pred EEEEEEEcCCCCCC-CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccc
Q 011833 78 RLALWRYLPSPAAP-QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSAN 156 (476)
Q Consensus 78 ~L~~~~~~p~~~~~-~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~ 156 (476)
...+++|.|..... ..+||||++--+.++..... +++++.|.+ |++||+.||.-.+......
T Consensus 85 ~~~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~----RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~------------ 147 (406)
T TIGR01849 85 FCRLIHFKRQGFRAELPGPAVLIVAPMSGHYATLL----RSTVEALLP-DHDVYITDWVNARMVPLSA------------ 147 (406)
T ss_pred CeEEEEECCCCcccccCCCcEEEEcCCchHHHHHH----HHHHHHHhC-CCcEEEEeCCCCCCCchhc------------
Confidence 35677786654321 12489999998886655553 789999999 9999999998877432111
Q ss_pred cccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhcc
Q 011833 157 AKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEED 236 (476)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 236 (476)
..|++++|+ +-
T Consensus 148 --------------------------------------------------------------------~~f~ldDYi-~~ 158 (406)
T TIGR01849 148 --------------------------------------------------------------------GKFDLEDYI-DY 158 (406)
T ss_pred --------------------------------------------------------------------CCCCHHHHH-HH
Confidence 147889998 56
Q ss_pred HHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcC---cchhh
Q 011833 237 VPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPL---SDPIQ 313 (476)
Q Consensus 237 l~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~---~~~~~ 313 (476)
+.++++.+ +. +++++|+||||.+++.+++.+.-.+.+.+++++++++++++.......+..+... .+...
T Consensus 159 l~~~i~~~----G~---~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~ 231 (406)
T TIGR01849 159 LIEFIRFL----GP---DIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQH 231 (406)
T ss_pred HHHHHHHh----CC---CCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHH
Confidence 66666554 33 4999999999999888887754222224699999999999988754444433210 00111
Q ss_pred hc-----------cCCcCChHHHHHhhccCCCCc---hHHHHHHHHhhcCCCCCCHHHHHHHhh--hccCCCCHHHHHHH
Q 011833 314 AL-----------NVPVIPLGTFLAAIHPFASSP---PYVLSWLKFLISAPDMMHPELFEKLIF--SNFGNIPTKLISQL 377 (476)
Q Consensus 314 ~~-----------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 377 (476)
.. +...+|...... .+..+... ....+.+..+... +.-..+...++.. ....+.|.....++
T Consensus 232 ~~i~~vp~~~~g~gr~v~PG~~~~~-~F~~mnp~r~~~~~~~~~~~l~~g-d~~~~~~~~~f~~~y~d~~dlpge~y~~~ 309 (406)
T TIGR01849 232 NVIMRVPFPYPGAGRLVYPGFLQLA-GFISMNLDRHTKAHSDFFLHLVKG-DGQEADKHRIFYDEYLAVMDMTAEFYLQT 309 (406)
T ss_pred HhhhccCccccCCCCcccCHHHHHH-HHHHcCcchHHHHHHHHHHHHhcC-CcchHHHHHHHHHHhhhccCCcHHHHHHH
Confidence 00 101233322222 22111111 1111222222211 1111222222222 22347888888887
Q ss_pred H-HHHHhCCccccCCcccccc---cCCCCc-ccEEEEeeCCCCcCCHHHHHHHHHh---cCCCceeEEEecCCCCCCCcc
Q 011833 378 T-TVFQEGGLCDRSGTFFYKD---HIGKTN-VPVLALAADQDLICPTEAVYETVKL---IPEHLVSFKVFGEPRGPHYAH 449 (476)
Q Consensus 378 ~-~~~~~~~~~~~~g~~~~~~---~l~~i~-vPvLii~G~~D~~vp~~~~~~~~~~---l~~~~~~~~v~~~~~~~~~gH 449 (476)
. .+++...+.. |.+.... .+++|+ +|+|.|.|++|.|+|+++++.+.+. ++..++..++. +++||
T Consensus 310 v~~vf~~n~L~~--G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~-----~~~GH 382 (406)
T TIGR01849 310 IDVVFQQFLLPQ--GKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQ-----PGVGH 382 (406)
T ss_pred HHHHHHhCCccC--CcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeec-----CCCCe
Confidence 7 5677666654 4433322 788999 9999999999999999999999887 47766766665 79999
Q ss_pred cccccccCCccchhHHHHHHHHhh
Q 011833 450 YDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 450 ~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
++++.+...++++++.|.+||.++
T Consensus 383 ~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 383 YGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred EEEeeChhhhhhhchHHHHHHHhC
Confidence 999999999999999999999874
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.3e-18 Score=185.45 Aligned_cols=121 Identities=20% Similarity=0.316 Sum_probs=88.9
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
..||.+++++.+.+ ..+|+|||+||++++...| ..+...| ..||+|+++|+||||.|++....
T Consensus 9 ~~~g~~l~~~~~g~-----~~~~~ivllHG~~~~~~~w-----~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~------ 71 (582)
T PRK05855 9 SSDGVRLAVYEWGD-----PDRPTVVLVHGYPDNHEVW-----DGVAPLL-ADRFRVVAYDVRGAGRSSAPKRT------ 71 (582)
T ss_pred eeCCEEEEEEEcCC-----CCCCeEEEEcCCCchHHHH-----HHHHHHh-hcceEEEEecCCCCCCCCCCCcc------
Confidence 46999999887632 2368999999999999999 5788888 57899999999999999753310
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
..|+++++
T Consensus 72 ------------------------------------------------------------------------~~~~~~~~ 79 (582)
T PRK05855 72 ------------------------------------------------------------------------AAYTLARL 79 (582)
T ss_pred ------------------------------------------------------------------------cccCHHHH
Confidence 03566777
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecc
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLAS 291 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~ 291 (476)
+ +|+.++++.+. .+ .+++++||||||.+++.++.... ...++..++.++.
T Consensus 80 a-~dl~~~i~~l~----~~-~~~~lvGhS~Gg~~a~~~a~~~~---~~~~v~~~~~~~~ 129 (582)
T PRK05855 80 A-DDFAAVIDAVS----PD-RPVHLLAHDWGSIQGWEAVTRPR---AAGRIASFTSVSG 129 (582)
T ss_pred H-HHHHHHHHHhC----CC-CcEEEEecChHHHHHHHHHhCcc---chhhhhhheeccC
Confidence 7 78888888652 11 25999999999999988876621 1244555555443
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.3e-17 Score=166.14 Aligned_cols=281 Identities=18% Similarity=0.237 Sum_probs=166.6
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCC----CCCCCcEEEecCCCCCc-ceeecCCCCCHHHHHHhCCCcEEEecCCCCCCc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAA----PQRNHPLLLLSGIGTNA-IGYDLSPEYSFARYMSGQGFDTWILEVRGAGLS 140 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~----~~~~~~VlllHG~~~~~-~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S 140 (476)
++..++ ++||-.+.+.++.+...- .+..|.||++||+.+++ ..|. ++++..+.++||+|+++|.||+|+|
T Consensus 94 ~Reii~-~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YV----r~lv~~a~~~G~r~VVfN~RG~~g~ 168 (409)
T KOG1838|consen 94 TREIIK-TSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYV----RHLVHEAQRKGYRVVVFNHRGLGGS 168 (409)
T ss_pred eeEEEE-eCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHH----HHHHHHHHhCCcEEEEECCCCCCCC
Confidence 455666 789999999887544331 24679999999995554 4454 6888888899999999999999988
Q ss_pred ccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhh
Q 011833 141 AHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLD 220 (476)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (476)
.-.. ++++..|
T Consensus 169 ~LtT------------------------------------------pr~f~ag--------------------------- 179 (409)
T KOG1838|consen 169 KLTT------------------------------------------PRLFTAG--------------------------- 179 (409)
T ss_pred ccCC------------------------------------------CceeecC---------------------------
Confidence 4321 1222222
Q ss_pred cccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh
Q 011833 221 LIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS 300 (476)
Q Consensus 221 ~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~ 300 (476)
-.+|+.+++++++++.... ++..||.||||++.+.|+++.. ...++.+.+.++.+.+.-....
T Consensus 180 ------------~t~Dl~~~v~~i~~~~P~a--~l~avG~S~Gg~iL~nYLGE~g---~~~~l~~a~~v~~Pwd~~~~~~ 242 (409)
T KOG1838|consen 180 ------------WTEDLREVVNHIKKRYPQA--PLFAVGFSMGGNILTNYLGEEG---DNTPLIAAVAVCNPWDLLAASR 242 (409)
T ss_pred ------------CHHHHHHHHHHHHHhCCCC--ceEEEEecchHHHHHHHhhhcc---CCCCceeEEEEeccchhhhhhh
Confidence 1479999999999998654 8999999999999999999854 3345777777777766321100
Q ss_pred hHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHH-HHHHHhhhccCCCCHHHHHHHHH
Q 011833 301 LLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPE-LFEKLIFSNFGNIPTKLISQLTT 379 (476)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 379 (476)
.+... ....+...+. ..-+..++... .+ .+.+...-. .....+.+.+|.+
T Consensus 243 ~~~~~---------------~~~~~y~~~l---------~~~l~~~~~~~----r~~~~~~~vd~d-~~~~~~SvreFD~ 293 (409)
T KOG1838|consen 243 SIETP---------------LYRRFYNRAL---------TLNLKRIVLRH----RHTLFEDPVDFD-VILKSRSVREFDE 293 (409)
T ss_pred HHhcc---------------cchHHHHHHH---------HHhHHHHHhhh----hhhhhhccchhh-hhhhcCcHHHHHh
Confidence 00000 0000000000 00011111000 00 000000000 0111255666666
Q ss_pred HHHhCC--ccccCC---cccccccCCCCcccEEEEeeCCCCcCCHHHHHH-HHHhcCCCceeEEEecCCCCCCCcccccc
Q 011833 380 VFQEGG--LCDRSG---TFFYKDHIGKTNVPVLALAADQDLICPTEAVYE-TVKLIPEHLVSFKVFGEPRGPHYAHYDLV 453 (476)
Q Consensus 380 ~~~~~~--~~~~~g---~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~gH~~~~ 453 (476)
.+...- +.+.+. .-.....+++|++|+|+|++.+|+++|++.... ..++-| .+-+.+- .+.||.+++
T Consensus 294 ~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np--~v~l~~T-----~~GGHlgfl 366 (409)
T KOG1838|consen 294 ALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNP--NVLLVIT-----SHGGHLGFL 366 (409)
T ss_pred hhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCC--cEEEEEe-----CCCceeeee
Confidence 665332 222110 011123789999999999999999999975432 222233 3444443 799999998
Q ss_pred cccC-CccchhHH-HHHHHHhh
Q 011833 454 GSRL-AAYQVYPC-IIEFLTRH 473 (476)
Q Consensus 454 ~~~~-~~~~v~~~-i~~fL~~~ 473 (476)
.+.. .+..+.+. +.+|+...
T Consensus 367 eg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 367 EGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred ccCCCccchhHHHHHHHHHHHH
Confidence 6632 23455566 77888653
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.4e-17 Score=144.32 Aligned_cols=144 Identities=24% Similarity=0.412 Sum_probs=113.4
Q ss_pred cEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhhhH
Q 011833 96 PLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQL 175 (476)
Q Consensus 96 ~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (476)
+||++||++.+...| ..+++.|+++||.|+++|+||+|.+..
T Consensus 1 ~vv~~HG~~~~~~~~-----~~~~~~l~~~G~~v~~~~~~~~~~~~~--------------------------------- 42 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDY-----QPLAEALAEQGYAVVAFDYPGHGDSDG--------------------------------- 42 (145)
T ss_dssp EEEEECTTTTTTHHH-----HHHHHHHHHTTEEEEEESCTTSTTSHH---------------------------------
T ss_pred CEEEECCCCCCHHHH-----HHHHHHHHHCCCEEEEEecCCCCccch---------------------------------
Confidence 589999999998888 689999999999999999999998722
Q ss_pred HHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcE
Q 011833 176 METVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKL 255 (476)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki 255 (476)
..++..+++.+.+... +.+++
T Consensus 43 ----------------------------------------------------------~~~~~~~~~~~~~~~~-~~~~i 63 (145)
T PF12695_consen 43 ----------------------------------------------------------ADAVERVLADIRAGYP-DPDRI 63 (145)
T ss_dssp ----------------------------------------------------------SHHHHHHHHHHHHHHC-TCCEE
T ss_pred ----------------------------------------------------------hHHHHHHHHHHHhhcC-CCCcE
Confidence 1355556666543322 34699
Q ss_pred eEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccCCCC
Q 011833 256 LAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASS 335 (476)
Q Consensus 256 ~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (476)
.++|||+||.+++.++.+. .+|+++|++++.. ..
T Consensus 64 ~l~G~S~Gg~~a~~~~~~~------~~v~~~v~~~~~~---~~------------------------------------- 97 (145)
T PF12695_consen 64 ILIGHSMGGAIAANLAARN------PRVKAVVLLSPYP---DS------------------------------------- 97 (145)
T ss_dssp EEEEETHHHHHHHHHHHHS------TTESEEEEESESS---GC-------------------------------------
T ss_pred EEEEEccCcHHHHHHhhhc------cceeEEEEecCcc---ch-------------------------------------
Confidence 9999999999999999873 6799999988821 00
Q ss_pred chHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeCCCC
Q 011833 336 PPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDL 415 (476)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~ 415 (476)
+.+.+.++|+++++|++|.
T Consensus 98 -------------------------------------------------------------~~~~~~~~pv~~i~g~~D~ 116 (145)
T PF12695_consen 98 -------------------------------------------------------------EDLAKIRIPVLFIHGENDP 116 (145)
T ss_dssp -------------------------------------------------------------HHHTTTTSEEEEEEETT-S
T ss_pred -------------------------------------------------------------hhhhccCCcEEEEEECCCC
Confidence 1233467799999999999
Q ss_pred cCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcc
Q 011833 416 ICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAH 449 (476)
Q Consensus 416 ~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH 449 (476)
++|.+..++++++++. .+++.++ ++.+|
T Consensus 117 ~~~~~~~~~~~~~~~~-~~~~~~i-----~g~~H 144 (145)
T PF12695_consen 117 LVPPEQVRRLYEALPG-PKELYII-----PGAGH 144 (145)
T ss_dssp SSHHHHHHHHHHHHCS-SEEEEEE-----TTS-T
T ss_pred cCCHHHHHHHHHHcCC-CcEEEEe-----CCCcC
Confidence 9999999999999984 4677777 89999
|
... |
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.9e-17 Score=155.70 Aligned_cols=162 Identities=20% Similarity=0.258 Sum_probs=109.5
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchh
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPI 312 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~ 312 (476)
..+|+.++++++.++...+.++|.++|||+||.+++.++.++| ..++++|..++..++.......
T Consensus 44 ~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~-----~~f~a~v~~~g~~d~~~~~~~~---------- 108 (213)
T PF00326_consen 44 DVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHP-----DRFKAAVAGAGVSDLFSYYGTT---------- 108 (213)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTC-----CGSSEEEEESE-SSTTCSBHHT----------
T ss_pred chhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccc-----eeeeeeeccceecchhcccccc----------
Confidence 3579999999999887777789999999999999999999877 8899999999987655431000
Q ss_pred hhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCc
Q 011833 313 QALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGT 392 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 392 (476)
.. +...+.... ..+ ..+++.++... .
T Consensus 109 ----------------------~~-~~~~~~~~~-~~~-~~~~~~~~~~s----------------~------------- 134 (213)
T PF00326_consen 109 ----------------------DI-YTKAEYLEY-GDP-WDNPEFYRELS----------------P------------- 134 (213)
T ss_dssp ----------------------CC-HHHGHHHHH-SST-TTSHHHHHHHH----------------H-------------
T ss_pred ----------------------cc-ccccccccc-Ccc-chhhhhhhhhc----------------c-------------
Confidence 00 000011110 000 00222222111 0
Q ss_pred ccccccCCC--CcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchhHHHHH
Q 011833 393 FFYKDHIGK--TNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIE 468 (476)
Q Consensus 393 ~~~~~~l~~--i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~ 468 (476)
...+.+ +++|+|++||++|..||++.+.++++.+... ..++.++ |+.||. +...+...+++..+++
T Consensus 135 ---~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~-----p~~gH~--~~~~~~~~~~~~~~~~ 204 (213)
T PF00326_consen 135 ---ISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIF-----PGEGHG--FGNPENRRDWYERILD 204 (213)
T ss_dssp ---GGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEE-----TT-SSS--TTSHHHHHHHHHHHHH
T ss_pred ---ccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEc-----CcCCCC--CCCchhHHHHHHHHHH
Confidence 012334 8999999999999999999999999888653 3566676 999992 2224445689999999
Q ss_pred HHHhh
Q 011833 469 FLTRH 473 (476)
Q Consensus 469 fL~~~ 473 (476)
||+++
T Consensus 205 f~~~~ 209 (213)
T PF00326_consen 205 FFDKY 209 (213)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99986
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.8e-17 Score=154.56 Aligned_cols=268 Identities=17% Similarity=0.244 Sum_probs=179.2
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
..||+.|...+|+..+.. ..-+++--+++-....| +.++..++.+||+|+++|+||.|.|+....
T Consensus 12 ~~DG~~l~~~~~pA~~~~---~g~~~va~a~Gv~~~fY-----RrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~------- 76 (281)
T COG4757 12 APDGYSLPGQRFPADGKA---SGRLVVAGATGVGQYFY-----RRFAAAAAKAGFEVLTFDYRGIGQSRPASL------- 76 (281)
T ss_pred cCCCccCccccccCCCCC---CCcEEecccCCcchhHh-----HHHHHHhhccCceEEEEecccccCCCcccc-------
Confidence 579999999999544331 22455555555555555 789999999999999999999999976432
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.+.+|.+.|+
T Consensus 77 ----------------------------------------------------------------------~~~~~~~~Dw 86 (281)
T COG4757 77 ----------------------------------------------------------------------SGSQWRYLDW 86 (281)
T ss_pred ----------------------------------------------------------------------ccCccchhhh
Confidence 0235888999
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchh
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPI 312 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~ 312 (476)
+..|++++++.+++.... -+...|||||||.+.-.+..+ .+.++....++...+.........+.. .
T Consensus 87 A~~D~~aal~~~~~~~~~--~P~y~vgHS~GGqa~gL~~~~-------~k~~a~~vfG~gagwsg~m~~~~~l~~----~ 153 (281)
T COG4757 87 ARLDFPAALAALKKALPG--HPLYFVGHSFGGQALGLLGQH-------PKYAAFAVFGSGAGWSGWMGLRERLGA----V 153 (281)
T ss_pred hhcchHHHHHHHHhhCCC--CceEEeeccccceeecccccC-------cccceeeEeccccccccchhhhhcccc----e
Confidence 999999999999887643 389999999999876444433 356666666655544433211111100 0
Q ss_pred hhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCc
Q 011833 313 QALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGT 392 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 392 (476)
-. ++...+.+ .-|... + + +.+...-.+.|...+.+|..++....+-..+..
T Consensus 154 ~l-----------~~lv~p~l------t~w~g~-------~-p----~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~ 204 (281)
T COG4757 154 LL-----------WNLVGPPL------TFWKGY-------M-P----KDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPA 204 (281)
T ss_pred ee-----------ccccccch------hhcccc-------C-c----HhhcCCCccCcchHHHHHHHHhcCccccccChh
Confidence 00 00011111 111110 0 0 111111126788889999998876654333322
Q ss_pred -ccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHH
Q 011833 393 -FFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFL 470 (476)
Q Consensus 393 -~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL 470 (476)
..+.+..+++++||+.+...+|+.+|+...+.+....+++.++...+.+.++ ..||++++ .+..+..++.+++|+
T Consensus 205 ~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~-~lGH~gyf--R~~~Ealwk~~L~w~ 280 (281)
T COG4757 205 MRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEG-PLGHMGYF--REPFEALWKEMLGWF 280 (281)
T ss_pred HhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccC-cccchhhh--ccchHHHHHHHHHhh
Confidence 2355678889999999999999999999999999999998788888765555 58998876 333378899999886
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.8e-16 Score=147.26 Aligned_cols=230 Identities=21% Similarity=0.280 Sum_probs=165.4
Q ss_pred CCceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHH-HhCCCcEEEecCCCCCCccc
Q 011833 64 ADELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYM-SGQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 64 ~~e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L-~~~Gy~V~~~D~rG~G~S~~ 142 (476)
+-|+..+. |.|.++|..|... ++ .+.|+++++||-.+|..+. -..++.+ ...+..|+++++||+|.|.+
T Consensus 53 pye~i~l~-T~D~vtL~a~~~~-~E---~S~pTlLyfh~NAGNmGhr-----~~i~~~fy~~l~mnv~ivsYRGYG~S~G 122 (300)
T KOG4391|consen 53 PYERIELR-TRDKVTLDAYLML-SE---SSRPTLLYFHANAGNMGHR-----LPIARVFYVNLKMNVLIVSYRGYGKSEG 122 (300)
T ss_pred CceEEEEE-cCcceeEeeeeec-cc---CCCceEEEEccCCCcccch-----hhHHHHHHHHcCceEEEEEeeccccCCC
Confidence 34566676 7999999999886 22 2689999999999888766 3455544 45689999999999999987
Q ss_pred ccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLI 222 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (476)
.+. ++|
T Consensus 123 sps---------------------------------------------E~G----------------------------- 128 (300)
T KOG4391|consen 123 SPS---------------------------------------------EEG----------------------------- 128 (300)
T ss_pred Ccc---------------------------------------------ccc-----------------------------
Confidence 653 111
Q ss_pred cccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhH
Q 011833 223 VKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLL 302 (476)
Q Consensus 223 ~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~ 302 (476)
+.-|..++++|+.++...+..|+++.|.|.||.+++..|+..- .++.++++-+.....+..
T Consensus 129 ----------L~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~-----~ri~~~ivENTF~SIp~~---- 189 (300)
T KOG4391|consen 129 ----------LKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNS-----DRISAIIVENTFLSIPHM---- 189 (300)
T ss_pred ----------eeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccch-----hheeeeeeechhccchhh----
Confidence 2468999999999998888889999999999999999998853 688888876654332111
Q ss_pred HHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHH
Q 011833 303 RLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQ 382 (476)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (476)
..+ .++++. .. .+..+ +.
T Consensus 190 --~i~--------------------~v~p~~------~k---------------~i~~l-------------------c~ 207 (300)
T KOG4391|consen 190 --AIP--------------------LVFPFP------MK---------------YIPLL-------------------CY 207 (300)
T ss_pred --hhh--------------------eeccch------hh---------------HHHHH-------------------HH
Confidence 000 011100 00 00000 00
Q ss_pred hCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccch
Q 011833 383 EGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQV 462 (476)
Q Consensus 383 ~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v 462 (476)
+..+. -.+.+++.++|.|++.|.+|.++||...+.+++..+...+++..| |++.|-|-... +-.
T Consensus 208 kn~~~-------S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eF-----P~gtHNDT~i~----dGY 271 (300)
T KOG4391|consen 208 KNKWL-------SYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEF-----PDGTHNDTWIC----DGY 271 (300)
T ss_pred Hhhhc-------chhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeC-----CCCccCceEEe----ccH
Confidence 00000 012456789999999999999999999999999999988888888 99999765432 668
Q ss_pred hHHHHHHHHhhc
Q 011833 463 YPCIIEFLTRHD 474 (476)
Q Consensus 463 ~~~i~~fL~~~~ 474 (476)
++.|.+||.+.+
T Consensus 272 fq~i~dFlaE~~ 283 (300)
T KOG4391|consen 272 FQAIEDFLAEVV 283 (300)
T ss_pred HHHHHHHHHHhc
Confidence 999999998754
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.3e-16 Score=154.66 Aligned_cols=259 Identities=17% Similarity=0.193 Sum_probs=155.1
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHh-CCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccc
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSG-QGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQ 170 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~-~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 170 (476)
.+.|+++++||+.++...| +++.+.|+. .|.+|+++|.|.||.|.+...
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw-----~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~------------------------- 99 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENW-----RSVAKNLSRKLGRDVYAVDVRNHGSSPKITV------------------------- 99 (315)
T ss_pred CCCCceEEecccccCCCCH-----HHHHHHhcccccCceEEEecccCCCCccccc-------------------------
Confidence 4679999999999999999 799999986 488999999999999976432
Q ss_pred hhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCC
Q 011833 171 SKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKP 250 (476)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~ 250 (476)
.+.+.++ +|+..+|+..+..+..
T Consensus 100 --------------------------------------------------------h~~~~ma-~dv~~Fi~~v~~~~~~ 122 (315)
T KOG2382|consen 100 --------------------------------------------------------HNYEAMA-EDVKLFIDGVGGSTRL 122 (315)
T ss_pred --------------------------------------------------------cCHHHHH-HHHHHHHHHccccccc
Confidence 2334444 8898888887643333
Q ss_pred CCCcEeEEEEchHH-HHHHHHHhcCCCCCCcccccEEEEecc-cccccCChhhHHHhhcCcchhhhccCC-cCChHHHHH
Q 011833 251 KDGKLLAVGHSMGG-ILLYAMLSHCGFEGKDSGFASVTTLAS-SLDYRPSNSLLRLLLPLSDPIQALNVP-VIPLGTFLA 327 (476)
Q Consensus 251 ~~~ki~lvGhS~GG-~ia~~~a~~~p~~~~~~~v~~lvlla~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 327 (476)
.++.++|||||| .+++..+..+| ..+..++++.- |..+........-+...+...... .+ .......+.
T Consensus 123 --~~~~l~GHsmGG~~~~m~~t~~~p-----~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~-~~~~~~rke~~~ 194 (315)
T KOG2382|consen 123 --DPVVLLGHSMGGVKVAMAETLKKP-----DLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLS-IGVSRGRKEALK 194 (315)
T ss_pred --CCceecccCcchHHHHHHHHHhcC-----cccceeEEEecCCccCCcccchHHHHHHHHHhcccc-ccccccHHHHHH
Confidence 389999999999 66666666766 66888887763 323333221111110000000000 00 000111111
Q ss_pred hhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccC--CCCccc
Q 011833 328 AIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHI--GKTNVP 405 (476)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l--~~i~vP 405 (476)
.+.. +.....+.+|+...+.. ...+.. + ....+...+.++..-+. . ..|...+ .....|
T Consensus 195 ~l~~-~~~d~~~~~fi~~nl~~-~~~~~s----~----~w~~nl~~i~~~~~~~~---~------~s~~~~l~~~~~~~p 255 (315)
T KOG2382|consen 195 SLIE-VGFDNLVRQFILTNLKK-SPSDGS----F----LWRVNLDSIASLLDEYE---I------LSYWADLEDGPYTGP 255 (315)
T ss_pred HHHH-HhcchHHHHHHHHhcCc-CCCCCc----e----EEEeCHHHHHHHHHHHH---h------hcccccccccccccc
Confidence 1111 11111122222222210 000000 0 00112222222221111 1 1122222 556899
Q ss_pred EEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 406 VLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 406 vLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
||++.|.++..+|.+.-.++.+.+|.. .++++ +++|| .++.|.|+++.+.|.+|+++++
T Consensus 256 vlfi~g~~S~fv~~~~~~~~~~~fp~~--e~~~l-----d~aGH---wVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 256 VLFIKGLQSKFVPDEHYPRMEKIFPNV--EVHEL-----DEAGH---WVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred eeEEecCCCCCcChhHHHHHHHhccch--heeec-----ccCCc---eeecCCHHHHHHHHHHHhcccC
Confidence 999999999999999999999999974 78887 78999 6668999999999999998864
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.6e-16 Score=150.33 Aligned_cols=216 Identities=17% Similarity=0.161 Sum_probs=151.3
Q ss_pred CceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHh-CCCcEEEecCCCCCCcccc
Q 011833 65 DELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSG-QGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 65 ~e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~-~Gy~V~~~D~rG~G~S~~~ 143 (476)
.+...+. |+.|-.+....+.|... ..+.+|++||........ ..+...|+. -+++|+.+|++|+|.|.+.
T Consensus 35 v~v~~~~-t~rgn~~~~~y~~~~~~---~~~~lly~hGNa~Dlgq~-----~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ 105 (258)
T KOG1552|consen 35 VEVFKVK-TSRGNEIVCMYVRPPEA---AHPTLLYSHGNAADLGQM-----VELFKELSIFLNCNVVSYDYSGYGRSSGK 105 (258)
T ss_pred cceEEee-cCCCCEEEEEEEcCccc---cceEEEEcCCcccchHHH-----HHHHHHHhhcccceEEEEecccccccCCC
Confidence 4555565 67777777777766543 468999999984443222 133334433 3899999999999999775
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
+.-
T Consensus 106 psE----------------------------------------------------------------------------- 108 (258)
T KOG1552|consen 106 PSE----------------------------------------------------------------------------- 108 (258)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 420
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHH
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLR 303 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~ 303 (476)
+ . ..+|+.++.++|++..| ...+++++|+|+|...++.+|+++| ++++|+.+|...-..
T Consensus 109 ~-----n--~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~-------~~alVL~SPf~S~~r------ 167 (258)
T KOG1552|consen 109 R-----N--LYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP-------LAAVVLHSPFTSGMR------ 167 (258)
T ss_pred c-----c--chhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC-------cceEEEeccchhhhh------
Confidence 0 0 24799999999999997 5579999999999999999999964 889999998653111
Q ss_pred HhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHh
Q 011833 304 LLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQE 383 (476)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (476)
. +++..... ..+
T Consensus 168 v------------------------~~~~~~~~-------------------~~~------------------------- 179 (258)
T KOG1552|consen 168 V------------------------AFPDTKTT-------------------YCF------------------------- 179 (258)
T ss_pred h------------------------hccCcceE-------------------Eee-------------------------
Confidence 1 11100000 000
Q ss_pred CCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchh
Q 011833 384 GGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVY 463 (476)
Q Consensus 384 ~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~ 463 (476)
..+...+.++.|++|||++||++|+++|.....++++..++. ++-.++ .+.||.+. +-..++.
T Consensus 180 -------d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~-~epl~v-----~g~gH~~~----~~~~~yi 242 (258)
T KOG1552|consen 180 -------DAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEK-VEPLWV-----KGAGHNDI----ELYPEYI 242 (258)
T ss_pred -------ccccccCcceeccCCEEEEecccCceecccccHHHHHhcccc-CCCcEE-----ecCCCccc----ccCHHHH
Confidence 011113467889999999999999999999999999999875 344444 79999775 3346777
Q ss_pred HHHHHHHHh
Q 011833 464 PCIIEFLTR 472 (476)
Q Consensus 464 ~~i~~fL~~ 472 (476)
..+..|+..
T Consensus 243 ~~l~~f~~~ 251 (258)
T KOG1552|consen 243 EHLRRFISS 251 (258)
T ss_pred HHHHHHHHH
Confidence 888888764
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-15 Score=155.31 Aligned_cols=262 Identities=21% Similarity=0.318 Sum_probs=145.3
Q ss_pred ceeeEee-CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccc
Q 011833 66 ELHYVAV-PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 66 e~~~v~~-~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
+.+.|.+ ..+|..+.+|.+.|... .++-|.||.+||.+.....|. . .-.++.+||.|+.+|.||.|......
T Consensus 55 ~vy~v~f~s~~g~~V~g~l~~P~~~-~~~~Pavv~~hGyg~~~~~~~-----~-~~~~a~~G~~vl~~d~rGqg~~~~d~ 127 (320)
T PF05448_consen 55 EVYDVSFESFDGSRVYGWLYRPKNA-KGKLPAVVQFHGYGGRSGDPF-----D-LLPWAAAGYAVLAMDVRGQGGRSPDY 127 (320)
T ss_dssp EEEEEEEEEGGGEEEEEEEEEES-S-SSSEEEEEEE--TT--GGGHH-----H-HHHHHHTT-EEEEE--TTTSSSS-B-
T ss_pred EEEEEEEEccCCCEEEEEEEecCCC-CCCcCEEEEecCCCCCCCCcc-----c-ccccccCCeEEEEecCCCCCCCCCCc
Confidence 3334433 34899999999999844 356788999999998876662 2 23467899999999999999432221
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
.. .. | ....++.-.|.++. |+
T Consensus 128 ~~----------~~--~----------------------~~~~g~~~~g~~~~-~e------------------------ 148 (320)
T PF05448_consen 128 RG----------SS--G----------------------GTLKGHITRGIDDN-PE------------------------ 148 (320)
T ss_dssp SS----------BS--S----------------------S-SSSSTTTTTTS--TT------------------------
T ss_pred cc----------cC--C----------------------CCCccHHhcCccCc-hH------------------------
Confidence 10 00 0 00001111110110 10
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHH
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRL 304 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~ 304 (476)
++-+..+ ..|+..++++++++...+.++|.+.|.|+||.+++.+|+.. ++|++++...|...--. +.
T Consensus 149 -~~yyr~~-~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd------~rv~~~~~~vP~l~d~~-----~~ 215 (320)
T PF05448_consen 149 -DYYYRRV-YLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALD------PRVKAAAADVPFLCDFR-----RA 215 (320)
T ss_dssp -T-HHHHH-HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS------ST-SEEEEESESSSSHH-----HH
T ss_pred -HHHHHHH-HHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhC------ccccEEEecCCCccchh-----hh
Confidence 1222222 36999999999998877778999999999999999999983 67999998877542100 00
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCch--HHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHH
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPP--YVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQ 382 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (476)
+ ... . ...+ -+..++... .......++.++.+
T Consensus 216 ~---------------------~~~-~--~~~~y~~~~~~~~~~-d~~~~~~~~v~~~L--------------------- 249 (320)
T PF05448_consen 216 L---------------------ELR-A--DEGPYPEIRRYFRWR-DPHHEREPEVFETL--------------------- 249 (320)
T ss_dssp H---------------------HHT-----STTTHHHHHHHHHH-SCTHCHHHHHHHHH---------------------
T ss_pred h---------------------hcC-C--ccccHHHHHHHHhcc-CCCcccHHHHHHHH---------------------
Confidence 0 000 0 0000 000111100 00000011111111
Q ss_pred hCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccch
Q 011833 383 EGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQV 462 (476)
Q Consensus 383 ~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v 462 (476)
+.++......+|++|+++..|-.|.+|||..+...++.|+.. +++.++ |..||-. ....
T Consensus 250 --------~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~-K~l~vy-----p~~~He~-------~~~~ 308 (320)
T PF05448_consen 250 --------SYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGP-KELVVY-----PEYGHEY-------GPEF 308 (320)
T ss_dssp --------HTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SS-EEEEEE-----TT--SST-------THHH
T ss_pred --------hhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCC-eeEEec-----cCcCCCc-------hhhH
Confidence 012233467789999999999999999999999999999864 788887 9999922 2444
Q ss_pred -hHHHHHHHHhh
Q 011833 463 -YPCIIEFLTRH 473 (476)
Q Consensus 463 -~~~i~~fL~~~ 473 (476)
.+..++||.+|
T Consensus 309 ~~~~~~~~l~~~ 320 (320)
T PF05448_consen 309 QEDKQLNFLKEH 320 (320)
T ss_dssp HHHHHHHHHHH-
T ss_pred HHHHHHHHHhcC
Confidence 89999999876
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.7e-17 Score=152.62 Aligned_cols=57 Identities=28% Similarity=0.444 Sum_probs=50.4
Q ss_pred chhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 229 FDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 229 ~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
+.++..+|+.+.++.+++..+.+ ++++|||||||.+++.+++.+| ++|+++|+++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~l~~~--~~~~vG~S~Gg~~~~~~a~~~p-----~~v~~lvl~~~~ 78 (230)
T PF00561_consen 22 FPDYTTDDLAADLEALREALGIK--KINLVGHSMGGMLALEYAAQYP-----ERVKKLVLISPP 78 (230)
T ss_dssp SCTHCHHHHHHHHHHHHHHHTTS--SEEEEEETHHHHHHHHHHHHSG-----GGEEEEEEESES
T ss_pred cccccHHHHHHHHHHHHHHhCCC--CeEEEEECCChHHHHHHHHHCc-----hhhcCcEEEeee
Confidence 34455678888999999998886 7999999999999999999998 799999999986
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.8e-15 Score=154.15 Aligned_cols=70 Identities=20% Similarity=0.294 Sum_probs=59.1
Q ss_pred ccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCC--CceeEEEecCCCCCC-CcccccccccCCccchhHHHHHHHH
Q 011833 395 YKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPE--HLVSFKVFGEPRGPH-YAHYDLVGSRLAAYQVYPCIIEFLT 471 (476)
Q Consensus 395 ~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~--~~~~~~v~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~fL~ 471 (476)
+.+.+.++++|+|+|+|++|.++|++..+++.+.+++ .+.+++++ ++ +||+.+ .+.++++.+.|.+||+
T Consensus 315 l~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I-----~s~~GH~~~---le~p~~~~~~I~~FL~ 386 (389)
T PRK06765 315 LEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEI-----ESINGHMAG---VFDIHLFEKKIYEFLN 386 (389)
T ss_pred HHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEE-----CCCCCcchh---hcCHHHHHHHHHHHHc
Confidence 4457889999999999999999999999999999974 23577776 64 899665 6788999999999997
Q ss_pred h
Q 011833 472 R 472 (476)
Q Consensus 472 ~ 472 (476)
+
T Consensus 387 ~ 387 (389)
T PRK06765 387 R 387 (389)
T ss_pred c
Confidence 5
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-15 Score=141.64 Aligned_cols=242 Identities=15% Similarity=0.171 Sum_probs=151.0
Q ss_pred CceEEEEEEEcCCCCCCCCCCcEEEecCC-CCCcceeecCCCCCHHHHHHh-CCCcEEEecCCCCCCcccccccCccccc
Q 011833 75 SDWRLALWRYLPSPAAPQRNHPLLLLSGI-GTNAIGYDLSPEYSFARYMSG-QGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~~~~~~~VlllHG~-~~~~~~~~~~~~~~l~~~L~~-~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+|..|.+..+..+ ...||++.|. |+....| ......|.. .-+.|+++|.||+|.|.++..
T Consensus 29 ng~ql~y~~~G~G------~~~iLlipGalGs~~tDf-----~pql~~l~k~l~~TivawDPpGYG~SrPP~R------- 90 (277)
T KOG2984|consen 29 NGTQLGYCKYGHG------PNYILLIPGALGSYKTDF-----PPQLLSLFKPLQVTIVAWDPPGYGTSRPPER------- 90 (277)
T ss_pred cCceeeeeecCCC------CceeEecccccccccccC-----CHHHHhcCCCCceEEEEECCCCCCCCCCCcc-------
Confidence 7888988887443 2458888887 5555566 233333332 238999999999999976542
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
++..+.
T Consensus 91 -------------------------------------------------------------------------kf~~~f- 96 (277)
T KOG2984|consen 91 -------------------------------------------------------------------------KFEVQF- 96 (277)
T ss_pred -------------------------------------------------------------------------cchHHH-
Confidence 111122
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh-hHHHhhcCcch
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS-LLRLLLPLSDP 311 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~-~~~~~~~~~~~ 311 (476)
..+|...+++.++.. +-.++.++|||-||+.++..|++++ +.|..++.++...-...... ..+.+
T Consensus 97 f~~Da~~avdLM~aL---k~~~fsvlGWSdGgiTalivAak~~-----e~v~rmiiwga~ayvn~~~~ma~kgi------ 162 (277)
T KOG2984|consen 97 FMKDAEYAVDLMEAL---KLEPFSVLGWSDGGITALIVAAKGK-----EKVNRMIIWGAAAYVNHLGAMAFKGI------ 162 (277)
T ss_pred HHHhHHHHHHHHHHh---CCCCeeEeeecCCCeEEEEeeccCh-----hhhhhheeecccceecchhHHHHhch------
Confidence 236666666665544 2348999999999999999999987 88999999987654433211 01111
Q ss_pred hhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcC-CCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhC-Ccc-c
Q 011833 312 IQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISA-PDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEG-GLC-D 388 (476)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~ 388 (476)
.. +..|....-.. .+...+|.+ ..+|..++..- .+. .
T Consensus 163 ------------------Rd-------v~kWs~r~R~P~e~~Yg~e~f---------------~~~wa~wvD~v~qf~~~ 202 (277)
T KOG2984|consen 163 ------------------RD-------VNKWSARGRQPYEDHYGPETF---------------RTQWAAWVDVVDQFHSF 202 (277)
T ss_pred ------------------HH-------HhhhhhhhcchHHHhcCHHHH---------------HHHHHHHHHHHHHHhhc
Confidence 00 01221110000 001112222 22333333211 111 1
Q ss_pred cCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHH
Q 011833 389 RSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIE 468 (476)
Q Consensus 389 ~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~ 468 (476)
++|.+ ..-.+.+++||+||+||.+|++|+...+.-+-...+.+ +++++ |..+| -.+..-+++++..+++
T Consensus 203 ~dG~f-Cr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a--~~~~~-----peGkH---n~hLrya~eFnklv~d 271 (277)
T KOG2984|consen 203 CDGRF-CRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLA--KVEIH-----PEGKH---NFHLRYAKEFNKLVLD 271 (277)
T ss_pred CCCch-HhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccc--eEEEc-----cCCCc---ceeeechHHHHHHHHH
Confidence 22433 44579999999999999999999999998888888877 55665 55556 2235557999999999
Q ss_pred HHHhh
Q 011833 469 FLTRH 473 (476)
Q Consensus 469 fL~~~ 473 (476)
||++.
T Consensus 272 Fl~~~ 276 (277)
T KOG2984|consen 272 FLKST 276 (277)
T ss_pred HHhcc
Confidence 99875
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1e-14 Score=137.67 Aligned_cols=55 Identities=13% Similarity=0.015 Sum_probs=44.3
Q ss_pred CcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHH
Q 011833 402 TNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLT 471 (476)
Q Consensus 402 i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~ 471 (476)
..+|+++++|++|.++|.+.+.++++.. ..+++ ++++|. + ...+++.+.|.+|+.
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~-----~~~~~-----~ggdH~---f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAAC-----RQTVE-----EGGNHA---F--VGFERYFNQIVDFLG 189 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhc-----ceEEE-----CCCCcc---h--hhHHHhHHHHHHHhc
Confidence 6789999999999999999999999954 34454 899992 2 223889999999985
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.4e-15 Score=148.14 Aligned_cols=132 Identities=14% Similarity=0.146 Sum_probs=95.0
Q ss_pred eEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCc
Q 011833 69 YVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGE 148 (476)
Q Consensus 69 ~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~ 148 (476)
++. ++.|. +..+.+.|... ..+++||++||++.....+. .-...+++.|+++||.|+++|+||||.|.+...
T Consensus 4 ~l~-~~~g~-~~~~~~~p~~~--~~~~~VlllHG~g~~~~~~~-~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~--- 75 (266)
T TIGR03101 4 FLD-APHGF-RFCLYHPPVAV--GPRGVVIYLPPFAEEMNKSR-RMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA--- 75 (266)
T ss_pred Eec-CCCCc-EEEEEecCCCC--CCceEEEEECCCcccccchh-HHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc---
Confidence 444 44555 44444545432 23688999999987543331 000346788999999999999999999864221
Q ss_pred cccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCC
Q 011833 149 DSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWD 228 (476)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (476)
+.+
T Consensus 76 -----------------------------------------------------------------------------~~~ 78 (266)
T TIGR03101 76 -----------------------------------------------------------------------------AAR 78 (266)
T ss_pred -----------------------------------------------------------------------------cCC
Confidence 123
Q ss_pred chhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 229 FDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 229 ~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
++.+. +|+.++++++++. +. .+++++||||||.+++.++.++| .+++++|+++|...
T Consensus 79 ~~~~~-~Dv~~ai~~L~~~-~~--~~v~LvG~SmGG~vAl~~A~~~p-----~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 79 WDVWK-EDVAAAYRWLIEQ-GH--PPVTLWGLRLGALLALDAANPLA-----AKCNRLVLWQPVVS 135 (266)
T ss_pred HHHHH-HHHHHHHHHHHhc-CC--CCEEEEEECHHHHHHHHHHHhCc-----cccceEEEeccccc
Confidence 44445 8999999999775 33 48999999999999999998887 78999999998754
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.9e-14 Score=139.73 Aligned_cols=151 Identities=19% Similarity=0.256 Sum_probs=90.8
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHH-HhCCCcEEEecC--CCCCCcccccccCcc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYM-SGQGFDTWILEV--RGAGLSAHRVEFGED 149 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L-~~~Gy~V~~~D~--rG~G~S~~~~~~~~~ 149 (476)
..-|....+..|.|......+.|+|+++||++++...|.. ......+ .+.||.|+++|. ||+|.+......+
T Consensus 21 ~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~---~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~-- 95 (275)
T TIGR02821 21 ETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMI---KAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWD-- 95 (275)
T ss_pred cccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHh---hhHHHHHHhhcCcEEEEeCCCCCcCCCCCCccccc--
Confidence 3457777788888865323456899999999998877731 1123344 457999999998 6666543211000
Q ss_pred ccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCc
Q 011833 150 SMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDF 229 (476)
Q Consensus 150 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (476)
.|.+..|..+ . +..++ .-.+++
T Consensus 96 ----------~g~~~~~~~d----------------------~------------------~~~~~--------~~~~~~ 117 (275)
T TIGR02821 96 ----------FGKGAGFYVD----------------------A------------------TEEPW--------SQHYRM 117 (275)
T ss_pred ----------ccCCcccccc----------------------C------------------CcCcc--------cccchH
Confidence 0111110000 0 00000 001233
Q ss_pred hhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 230 DHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 230 ~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
.+++.+++..+++ +..+.+.+++.++||||||.+++.++.++| ..+++++++++..+
T Consensus 118 ~~~~~~~l~~~~~---~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p-----~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 118 YSYIVQELPALVA---AQFPLDGERQGITGHSMGGHGALVIALKNP-----DRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHHHHH---hhCCCCCCceEEEEEChhHHHHHHHHHhCc-----ccceEEEEECCccC
Confidence 4444455544443 333444568999999999999999999988 78999999888764
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.6e-14 Score=139.85 Aligned_cols=262 Identities=19% Similarity=0.293 Sum_probs=164.3
Q ss_pred ceeeEeeC-CCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccc
Q 011833 66 ELHYVAVP-NSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 66 e~~~v~~~-~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
+.+.|+.+ .+|.++..|...|... .++.|.||-.||.+++...|. .+ -.++..||.|+.+|.||.|.|....
T Consensus 55 e~ydvTf~g~~g~rI~gwlvlP~~~-~~~~P~vV~fhGY~g~~g~~~-----~~-l~wa~~Gyavf~MdvRGQg~~~~dt 127 (321)
T COG3458 55 EVYDVTFTGYGGARIKGWLVLPRHE-KGKLPAVVQFHGYGGRGGEWH-----DM-LHWAVAGYAVFVMDVRGQGSSSQDT 127 (321)
T ss_pred EEEEEEEeccCCceEEEEEEeeccc-CCccceEEEEeeccCCCCCcc-----cc-ccccccceeEEEEecccCCCccccC
Confidence 44445443 4789999999999865 367789999999999987772 22 2345679999999999999884421
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
... |-+.++-| ...++.-+ -+
T Consensus 128 ~~~------p~~~s~pG-----------------------~mtrGilD------------------------------~k 148 (321)
T COG3458 128 ADP------PGGPSDPG-----------------------FMTRGILD------------------------------RK 148 (321)
T ss_pred CCC------CCCCcCCc-----------------------eeEeeccc------------------------------CC
Confidence 100 00001111 11111111 01
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHH
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRL 304 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~ 304 (476)
.+|=+.+.. .|+..+++.+......+..+|.+.|.|+||.+++.+++. +.+|+++++.-|.+.--..
T Consensus 149 d~yyyr~v~-~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal------~~rik~~~~~~Pfl~df~r------ 215 (321)
T COG3458 149 DTYYYRGVF-LDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAAL------DPRIKAVVADYPFLSDFPR------ 215 (321)
T ss_pred CceEEeeeh-HHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhc------Chhhhcccccccccccchh------
Confidence 223333323 689999999988888888899999999999999999987 4678888876665421110
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhC
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEG 384 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (476)
...+....++ .-+..++...+....+.++.+
T Consensus 216 ------------------------~i~~~~~~~y--dei~~y~k~h~~~e~~v~~TL----------------------- 246 (321)
T COG3458 216 ------------------------AIELATEGPY--DEIQTYFKRHDPKEAEVFETL----------------------- 246 (321)
T ss_pred ------------------------heeecccCcH--HHHHHHHHhcCchHHHHHHHH-----------------------
Confidence 0000011110 001111111110011111111
Q ss_pred CccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhH
Q 011833 385 GLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 385 ~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
+.++......++++|+|+..|-.|.+|||.++...++.++.. +++.++ |-.+|.+ .+.-..+
T Consensus 247 ------~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~-K~i~iy-----~~~aHe~------~p~~~~~ 308 (321)
T COG3458 247 ------SYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTS-KTIEIY-----PYFAHEG------GPGFQSR 308 (321)
T ss_pred ------hhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCC-ceEEEe-----ecccccc------CcchhHH
Confidence 012333456789999999999999999999999999999874 778887 7788943 3556667
Q ss_pred HHHHHHHhh
Q 011833 465 CIIEFLTRH 473 (476)
Q Consensus 465 ~i~~fL~~~ 473 (476)
.+..|+...
T Consensus 309 ~~~~~l~~l 317 (321)
T COG3458 309 QQVHFLKIL 317 (321)
T ss_pred HHHHHHHhh
Confidence 788888654
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.6e-14 Score=141.30 Aligned_cols=153 Identities=17% Similarity=0.249 Sum_probs=92.7
Q ss_pred CCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcccccc
Q 011833 74 NSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMIT 153 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~ 153 (476)
.-|..+.+..|.|......+.|+|+++||++++...|... ..+.+.+...|+.|+++|..++|.-..
T Consensus 27 ~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~--~~~~~~~~~~g~~Vv~pd~~~~g~~~~----------- 93 (283)
T PLN02442 27 TLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQK--SGAQRAAAARGIALVAPDTSPRGLNVE----------- 93 (283)
T ss_pred ccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHh--hhHHHHHhhcCeEEEecCCCCCCCCCC-----------
Confidence 3466777888877643234568999999998887666310 134466777899999999987773110
Q ss_pred ccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhh
Q 011833 154 SANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYL 233 (476)
Q Consensus 154 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (476)
|....|.... .-..+.+ .....| ..|.+.+++
T Consensus 94 -------~~~~~~~~~~--------------~~~~~~~------------------~~~~~~---------~~~~~~~~~ 125 (283)
T PLN02442 94 -------GEADSWDFGV--------------GAGFYLN------------------ATQEKW---------KNWRMYDYV 125 (283)
T ss_pred -------CCccccccCC--------------Ccceeec------------------cccCCC---------cccchhhhH
Confidence 0000000000 0000000 000000 012334555
Q ss_pred hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
.+++...++...... +.++++++||||||.+++.++.++| ..+++++++++..+
T Consensus 126 ~~~l~~~i~~~~~~~--~~~~~~i~G~S~GG~~a~~~a~~~p-----~~~~~~~~~~~~~~ 179 (283)
T PLN02442 126 VKELPKLLSDNFDQL--DTSRASIFGHSMGGHGALTIYLKNP-----DKYKSVSAFAPIAN 179 (283)
T ss_pred HHHHHHHHHHHHHhc--CCCceEEEEEChhHHHHHHHHHhCc-----hhEEEEEEECCccC
Confidence 566666666554333 3358999999999999999999988 78999999988765
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.1e-14 Score=137.57 Aligned_cols=206 Identities=18% Similarity=0.235 Sum_probs=126.8
Q ss_pred EEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCC-cccccccCcccccccccccc
Q 011833 81 LWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGL-SAHRVEFGEDSMITSANAKS 159 (476)
Q Consensus 81 ~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~-S~~~~~~~~~~~~~~~~~~~ 159 (476)
.+...|... +++|.||++|++.+-.... +.++..|+++||.|+++|+-+-.. ......
T Consensus 3 ay~~~P~~~--~~~~~Vvv~~d~~G~~~~~-----~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~-------------- 61 (218)
T PF01738_consen 3 AYVARPEGG--GPRPAVVVIHDIFGLNPNI-----RDLADRLAEEGYVVLAPDLFGGRGAPPSDPE-------------- 61 (218)
T ss_dssp EEEEEETTS--SSEEEEEEE-BTTBS-HHH-----HHHHHHHHHTT-EEEEE-CCCCTS--CCCHH--------------
T ss_pred EEEEeCCCC--CCCCEEEEEcCCCCCchHH-----HHHHHHHHhcCCCEEecccccCCCCCccchh--------------
Confidence 445556543 4679999999997765444 578999999999999999865433 111000
Q ss_pred CCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHH
Q 011833 160 TGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPA 239 (476)
Q Consensus 160 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a 239 (476)
+ ....|. .-.. +. .+-...|+.+
T Consensus 62 ----------~-----~~~~~~----------------------------~~~~------------~~--~~~~~~~~~a 84 (218)
T PF01738_consen 62 ----------E-----AFAAMR----------------------------ELFA------------PR--PEQVAADLQA 84 (218)
T ss_dssp ----------C-----HHHHHH----------------------------HCHH------------HS--HHHHHHHHHH
T ss_pred ----------h-----HHHHHH----------------------------HHHh------------hh--HHHHHHHHHH
Confidence 0 000000 0000 00 1113478999
Q ss_pred HHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCc
Q 011833 240 VMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPV 319 (476)
Q Consensus 240 ~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (476)
++++++++...+.++|.++|+||||.+++.++... ..+++.|..-+.....
T Consensus 85 a~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~------~~~~a~v~~yg~~~~~----------------------- 135 (218)
T PF01738_consen 85 AVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD------PRVDAAVSFYGGSPPP----------------------- 135 (218)
T ss_dssp HHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT------TTSSEEEEES-SSSGG-----------------------
T ss_pred HHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc------cccceEEEEcCCCCCC-----------------------
Confidence 99999998755567999999999999999999773 4688888755510000
Q ss_pred CChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccC
Q 011833 320 IPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHI 399 (476)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l 399 (476)
......
T Consensus 136 --------------------------------------------------------------------------~~~~~~ 141 (218)
T PF01738_consen 136 --------------------------------------------------------------------------PPLEDA 141 (218)
T ss_dssp --------------------------------------------------------------------------GHHHHG
T ss_pred --------------------------------------------------------------------------cchhhh
Confidence 000134
Q ss_pred CCCcccEEEEeeCCCCcCCHHHHHHHHHhcC--CCceeEEEecCCCCCCCcccccccc-c-----CCccchhHHHHHHHH
Q 011833 400 GKTNVPVLALAADQDLICPTEAVYETVKLIP--EHLVSFKVFGEPRGPHYAHYDLVGS-R-----LAAYQVYPCIIEFLT 471 (476)
Q Consensus 400 ~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~--~~~~~~~v~~~~~~~~~gH~~~~~~-~-----~~~~~v~~~i~~fL~ 471 (476)
.++++|+++++|++|+.+|.+.++.+.+.+. +...+++++ |+.+|. |... . .+.++.++.+++||+
T Consensus 142 ~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y-----~ga~Hg-F~~~~~~~~~~~aa~~a~~~~~~ff~ 215 (218)
T PF01738_consen 142 PKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVY-----PGAGHG-FANPSRPPYDPAAAEDAWQRTLAFFK 215 (218)
T ss_dssp GG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEE-----TT--TT-TTSTTSTT--HHHHHHHHHHHHHHHC
T ss_pred cccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEEC-----CCCccc-ccCCCCcccCHHHHHHHHHHHHHHHH
Confidence 5689999999999999999999888888872 334677777 899993 3322 1 134678899999998
Q ss_pred hh
Q 011833 472 RH 473 (476)
Q Consensus 472 ~~ 473 (476)
+|
T Consensus 216 ~~ 217 (218)
T PF01738_consen 216 RH 217 (218)
T ss_dssp C-
T ss_pred hc
Confidence 75
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.2e-14 Score=134.06 Aligned_cols=129 Identities=16% Similarity=0.143 Sum_probs=88.5
Q ss_pred EEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCC
Q 011833 82 WRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTG 161 (476)
Q Consensus 82 ~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g 161 (476)
+.|.|... .++.|+||++||.+.+...+.. ...+...+.+.||.|+++|+||++.+.....
T Consensus 2 ~ly~P~~~-~~~~P~vv~lHG~~~~~~~~~~--~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~---------------- 62 (212)
T TIGR01840 2 YVYVPAGL-TGPRALVLALHGCGQTASAYVI--DWGWKAAADRYGFVLVAPEQTSYNSSNNCWD---------------- 62 (212)
T ss_pred EEEcCCCC-CCCCCEEEEeCCCCCCHHHHhh--hcChHHHHHhCCeEEEecCCcCccccCCCCC----------------
Confidence 45556543 3457899999999988766621 0135666667899999999999886432100
Q ss_pred CcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHH
Q 011833 162 GTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVM 241 (476)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i 241 (476)
|-.... .+ . ......|+..++
T Consensus 63 ----~~~~~~------------------~~-----------------------------------~--~~~~~~~~~~~i 83 (212)
T TIGR01840 63 ----WFFTHH------------------RA-----------------------------------R--GTGEVESLHQLI 83 (212)
T ss_pred ----CCCccc------------------cC-----------------------------------C--CCccHHHHHHHH
Confidence 000000 00 0 000135788889
Q ss_pred HHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 242 EYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 242 ~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
+++.+....+.++++++||||||.+++.++.++| ..+++++.+++..
T Consensus 84 ~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p-----~~~~~~~~~~g~~ 130 (212)
T TIGR01840 84 DAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYP-----DVFAGGASNAGLP 130 (212)
T ss_pred HHHHHhcCcChhheEEEEECHHHHHHHHHHHhCc-----hhheEEEeecCCc
Confidence 9998887766679999999999999999999987 7888988888654
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.57 E-value=1e-13 Score=151.14 Aligned_cols=128 Identities=19% Similarity=0.212 Sum_probs=99.3
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcc---eeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAI---GYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGED 149 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~---~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~ 149 (476)
..||.+|.+..|.|... ++.|+||++||++.+.. .+. ......|+++||.|+++|+||+|.|.+....
T Consensus 3 ~~DG~~L~~~~~~P~~~--~~~P~Il~~~gyg~~~~~~~~~~----~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~--- 73 (550)
T TIGR00976 3 MRDGTRLAIDVYRPAGG--GPVPVILSRTPYGKDAGLRWGLD----KTEPAWFVAQGYAVVIQDTRGRGASEGEFDL--- 73 (550)
T ss_pred CCCCCEEEEEEEecCCC--CCCCEEEEecCCCCchhhccccc----cccHHHHHhCCcEEEEEeccccccCCCceEe---
Confidence 46999999999988643 35789999999987653 221 2456788999999999999999999753210
Q ss_pred ccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCc
Q 011833 150 SMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDF 229 (476)
Q Consensus 150 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (476)
++
T Consensus 74 -----------------------------------------------------------------------------~~- 75 (550)
T TIGR00976 74 -----------------------------------------------------------------------------LG- 75 (550)
T ss_pred -----------------------------------------------------------------------------cC-
Confidence 11
Q ss_pred hhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 230 DHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 230 ~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
.+ ..+|+.++|+++.++... ++++.++||||||.+++.++..+| .+++++|..++..+
T Consensus 76 ~~-~~~D~~~~i~~l~~q~~~-~~~v~~~G~S~GG~~a~~~a~~~~-----~~l~aiv~~~~~~d 133 (550)
T TIGR00976 76 SD-EAADGYDLVDWIAKQPWC-DGNVGMLGVSYLAVTQLLAAVLQP-----PALRAIAPQEGVWD 133 (550)
T ss_pred cc-cchHHHHHHHHHHhCCCC-CCcEEEEEeChHHHHHHHHhccCC-----CceeEEeecCcccc
Confidence 11 247999999999876432 369999999999999999999876 78999998887655
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.9e-14 Score=143.85 Aligned_cols=121 Identities=21% Similarity=0.172 Sum_probs=83.7
Q ss_pred EEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccc
Q 011833 79 LALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAK 158 (476)
Q Consensus 79 L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 158 (476)
+.+..|.|... +..|+||++||++.+...| ..+++.|+++||.|+++|++|++.+....
T Consensus 39 ~p~~v~~P~~~--g~~PvVv~lHG~~~~~~~y-----~~l~~~Las~G~~VvapD~~g~~~~~~~~-------------- 97 (313)
T PLN00021 39 KPLLVATPSEA--GTYPVLLFLHGYLLYNSFY-----SQLLQHIASHGFIVVAPQLYTLAGPDGTD-------------- 97 (313)
T ss_pred ceEEEEeCCCC--CCCCEEEEECCCCCCcccH-----HHHHHHHHhCCCEEEEecCCCcCCCCchh--------------
Confidence 44555667543 4578999999999988777 58899999999999999999864321100
Q ss_pred cCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHH
Q 011833 159 STGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVP 238 (476)
Q Consensus 159 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 238 (476)
..+|..
T Consensus 98 --------------------------------------------------------------------------~i~d~~ 103 (313)
T PLN00021 98 --------------------------------------------------------------------------EIKDAA 103 (313)
T ss_pred --------------------------------------------------------------------------hHHHHH
Confidence 012344
Q ss_pred HHHHHHHHHh--------CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 239 AVMEYIRTLS--------KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 239 a~i~~l~~~~--------~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
++++++.+.. ..+.++++++||||||.+++.++..++-.....+|+++++++|...
T Consensus 104 ~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 104 AVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred HHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 4455554321 1223589999999999999999988761111246889998888653
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.2e-14 Score=136.68 Aligned_cols=135 Identities=25% Similarity=0.352 Sum_probs=92.1
Q ss_pred CCCceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHh-CCCcEEEecCCCCCCcc
Q 011833 63 TADELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSG-QGFDTWILEVRGAGLSA 141 (476)
Q Consensus 63 ~~~e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~-~Gy~V~~~D~rG~G~S~ 141 (476)
.-++...|.++.+..+...+...|. .+.+|.++++||.+.+...| ..++..|.. .-.+|+++|+||||.|.
T Consensus 46 yFdekedv~i~~~~~t~n~Y~t~~~---~t~gpil~l~HG~G~S~LSf-----A~~a~el~s~~~~r~~a~DlRgHGeTk 117 (343)
T KOG2564|consen 46 YFDEKEDVSIDGSDLTFNVYLTLPS---ATEGPILLLLHGGGSSALSF-----AIFASELKSKIRCRCLALDLRGHGETK 117 (343)
T ss_pred hhccccccccCCCcceEEEEEecCC---CCCccEEEEeecCcccchhH-----HHHHHHHHhhcceeEEEeeccccCccc
Confidence 4455666665332224445544443 24579999999999999999 578887764 36788999999999985
Q ss_pred cccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhc
Q 011833 142 HRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDL 221 (476)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (476)
-...
T Consensus 118 ~~~e---------------------------------------------------------------------------- 121 (343)
T KOG2564|consen 118 VENE---------------------------------------------------------------------------- 121 (343)
T ss_pred cCCh----------------------------------------------------------------------------
Confidence 4321
Q ss_pred ccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 222 IVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 222 ~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
.+++.+.++ +|+.++++++-. ....+|++|||||||.|+...|...- -+.+.+++++.-+
T Consensus 122 ---~dlS~eT~~-KD~~~~i~~~fg---e~~~~iilVGHSmGGaIav~~a~~k~----lpsl~Gl~viDVV 181 (343)
T KOG2564|consen 122 ---DDLSLETMS-KDFGAVIKELFG---ELPPQIILVGHSMGGAIAVHTAASKT----LPSLAGLVVIDVV 181 (343)
T ss_pred ---hhcCHHHHH-HHHHHHHHHHhc---cCCCceEEEeccccchhhhhhhhhhh----chhhhceEEEEEe
Confidence 124555666 788877776643 34558999999999999976664321 2348888887654
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.3e-13 Score=134.17 Aligned_cols=192 Identities=13% Similarity=0.152 Sum_probs=124.9
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
.++.||++||++++...| ..+++.|...++.+..++.+|...+... .+..|.....
T Consensus 15 ~~~~vIlLHG~G~~~~~~-----~~l~~~l~~~~~~~~~i~~~g~~~~~~~------------------~g~~W~~~~~- 70 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAM-----GEIGSWFAPAFPDALVVSVGGPEPSGNG------------------AGRQWFSVQG- 70 (232)
T ss_pred CCcEEEEEeCCCCChHHH-----HHHHHHHHHHCCCCEEECCCCCCCcCCC------------------CCcccccCCC-
Confidence 468899999999999998 5899999888888888888886533110 1112211000
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
..++ ...++ +... .+.+.+.++++.+..+.+.
T Consensus 71 ----------------~~~~-----------------~~~~~--------------~~~~-~~~l~~~i~~~~~~~~~~~ 102 (232)
T PRK11460 71 ----------------ITED-----------------NRQAR--------------VAAI-MPTFIETVRYWQQQSGVGA 102 (232)
T ss_pred ----------------CCcc-----------------chHHH--------------HHHH-HHHHHHHHHHHHHhcCCCh
Confidence 0000 00000 0111 1345566677766766666
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccC
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPF 332 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (476)
++++++||||||.+++.++.++| ..+.+++.+++... .
T Consensus 103 ~~i~l~GfS~Gg~~al~~a~~~~-----~~~~~vv~~sg~~~--~----------------------------------- 140 (232)
T PRK11460 103 SATALIGFSQGAIMALEAVKAEP-----GLAGRVIAFSGRYA--S----------------------------------- 140 (232)
T ss_pred hhEEEEEECHHHHHHHHHHHhCC-----CcceEEEEeccccc--c-----------------------------------
Confidence 78999999999999999888766 55666665543210 0
Q ss_pred CCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeC
Q 011833 333 ASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAAD 412 (476)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~ 412 (476)
.+ .....+.|++++||+
T Consensus 141 ------------------------------------~~---------------------------~~~~~~~pvli~hG~ 157 (232)
T PRK11460 141 ------------------------------------LP---------------------------ETAPTATTIHLIHGG 157 (232)
T ss_pred ------------------------------------cc---------------------------ccccCCCcEEEEecC
Confidence 00 001136899999999
Q ss_pred CCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 413 QDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 413 ~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
+|.++|.+.++++.+.+... .++++++ ++.||. .. .+....+.+||.+.
T Consensus 158 ~D~vvp~~~~~~~~~~L~~~g~~~~~~~~-----~~~gH~---i~----~~~~~~~~~~l~~~ 208 (232)
T PRK11460 158 EDPVIDVAHAVAAQEALISLGGDVTLDIV-----EDLGHA---ID----PRLMQFALDRLRYT 208 (232)
T ss_pred CCCccCHHHHHHHHHHHHHCCCCeEEEEE-----CCCCCC---CC----HHHHHHHHHHHHHH
Confidence 99999999999999888643 3567766 899992 22 55677777777654
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.5e-13 Score=148.09 Aligned_cols=146 Identities=17% Similarity=0.098 Sum_probs=105.4
Q ss_pred CceeeEeeCCCceEEEEE-EEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccc
Q 011833 65 DELHYVAVPNSDWRLALW-RYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 65 ~e~~~v~~~~dG~~L~~~-~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~ 143 (476)
.|..++. +.||.++.++ .++|.....+++|.||+.||..+.+....+ ......|+++||.|+..|.||.|.
T Consensus 416 ~e~v~~~-s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f---~~~~~~l~~rG~~v~~~n~RGs~g---- 487 (686)
T PRK10115 416 SEHLWIT-ARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADF---SFSRLSLLDRGFVYAIVHVRGGGE---- 487 (686)
T ss_pred EEEEEEE-CCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCc---cHHHHHHHHCCcEEEEEEcCCCCc----
Confidence 3555565 6899999985 444543224567999999998666543211 355678899999999999999763
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
+|..|.+....
T Consensus 488 ------------------~G~~w~~~g~~--------------------------------------------------- 498 (686)
T PRK10115 488 ------------------LGQQWYEDGKF--------------------------------------------------- 498 (686)
T ss_pred ------------------cCHHHHHhhhh---------------------------------------------------
Confidence 34444442210
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
.+... ..+|+.+++++|.++.-.+.+++.+.|.|.||+++..++.++| +.++++|+..|..++.
T Consensus 499 --~~k~~--~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~P-----dlf~A~v~~vp~~D~~ 562 (686)
T PRK10115 499 --LKKKN--TFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRP-----ELFHGVIAQVPFVDVV 562 (686)
T ss_pred --hcCCC--cHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcCh-----hheeEEEecCCchhHh
Confidence 01111 2369999999998886566689999999999999999998888 8999999999887644
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.2e-13 Score=139.83 Aligned_cols=239 Identities=16% Similarity=0.200 Sum_probs=133.4
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
++..|.+ .|.+|.++...|... ++.|+||++-|+-+-...+. .-+..+|+.+|+.++++|.||.|.|.+...
T Consensus 166 ~~v~iP~--eg~~I~g~LhlP~~~--~p~P~VIv~gGlDs~qeD~~----~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l 237 (411)
T PF06500_consen 166 EEVEIPF--EGKTIPGYLHLPSGE--KPYPTVIVCGGLDSLQEDLY----RLFRDYLAPRGIAMLTVDMPGQGESPKWPL 237 (411)
T ss_dssp EEEEEEE--TTCEEEEEEEESSSS--S-EEEEEEE--TTS-GGGGH----HHHHCCCHHCT-EEEEE--TTSGGGTTT-S
T ss_pred EEEEEee--CCcEEEEEEEcCCCC--CCCCEEEEeCCcchhHHHHH----HHHHHHHHhCCCEEEEEccCCCcccccCCC
Confidence 4445544 678888887777733 45577777777766665541 123356889999999999999999854221
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
+ +
T Consensus 238 -~---------------------------------------------------~-------------------------- 239 (411)
T PF06500_consen 238 -T---------------------------------------------------Q-------------------------- 239 (411)
T ss_dssp -----------------------------------------------------S--------------------------
T ss_pred -C---------------------------------------------------c--------------------------
Confidence 0 0
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHh
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLL 305 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~ 305 (476)
+.+ .=..++++++.+....+..+|.++|.||||++++.+|...+ .+|+++|.+++++..--... ..+
T Consensus 240 --D~~----~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~-----~RlkavV~~Ga~vh~~ft~~--~~~ 306 (411)
T PF06500_consen 240 --DSS----RLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALED-----PRLKAVVALGAPVHHFFTDP--EWQ 306 (411)
T ss_dssp ---CC----HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTT-----TT-SEEEEES---SCGGH-H--HHH
T ss_pred --CHH----HHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcc-----cceeeEeeeCchHhhhhccH--HHH
Confidence 001 12357889998877667779999999999999999987644 89999999999864322110 000
Q ss_pred hcCcchhhhccCCcCChHHHHHhhccCCCCchHH-HHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhC
Q 011833 306 LPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYV-LSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEG 384 (476)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (476)
...|.. ...+..-++.. ..+.+.+..-
T Consensus 307 ----------------------------~~~P~my~d~LA~rlG~~-~~~~~~l~~e----------------------- 334 (411)
T PF06500_consen 307 ----------------------------QRVPDMYLDVLASRLGMA-AVSDESLRGE----------------------- 334 (411)
T ss_dssp ----------------------------TTS-HHHHHHHHHHCT-S-CE-HHHHHHH-----------------------
T ss_pred ----------------------------hcCCHHHHHHHHHHhCCc-cCCHHHHHHH-----------------------
Confidence 000100 01111111110 1111111100
Q ss_pred CccccCCcccc--cccC--CCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCcc
Q 011833 385 GLCDRSGTFFY--KDHI--GKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAY 460 (476)
Q Consensus 385 ~~~~~~g~~~~--~~~l--~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~ 460 (476)
+. .+.. ...+ .++.+|+|.+.|++|+++|.++.+-+...-... +...+. ...-|.++ .
T Consensus 335 -l~----~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~g-k~~~~~-----~~~~~~gy-------~ 396 (411)
T PF06500_consen 335 -LN----KFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDG-KALRIP-----SKPLHMGY-------P 396 (411)
T ss_dssp -GG----GGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT--EEEEE------SSSHHHHH-------H
T ss_pred -HH----hcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCC-ceeecC-----CCccccch-------H
Confidence 00 0111 1134 678999999999999999999999888876654 233332 23447555 5
Q ss_pred chhHHHHHHHHhh
Q 011833 461 QVYPCIIEFLTRH 473 (476)
Q Consensus 461 ~v~~~i~~fL~~~ 473 (476)
.....+.+||+..
T Consensus 397 ~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 397 QALDEIYKWLEDK 409 (411)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 6789999999864
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.8e-12 Score=120.94 Aligned_cols=66 Identities=20% Similarity=0.365 Sum_probs=50.8
Q ss_pred ccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHH
Q 011833 397 DHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLT 471 (476)
Q Consensus 397 ~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~ 471 (476)
....++++|+++++|++|.+.|......+.+.++. ...+.++ ++.||... .+.++.+.+.+.+|++
T Consensus 215 ~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~gH~~~---~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 215 AALARITVPTLIIHGEDDPVVPAELARRLAAALPN-DARLVVI-----PGAGHFPH---LEAPEAFAAALLAFLE 280 (282)
T ss_pred hhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCC-CceEEEe-----CCCCCcch---hhcHHHHHHHHHHHHh
Confidence 45777889999999999977777777777777775 2356666 89999554 6777888888888554
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.1e-12 Score=128.04 Aligned_cols=214 Identities=19% Similarity=0.230 Sum_probs=148.0
Q ss_pred CCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCC-CCCcccccccCccccc
Q 011833 74 NSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRG-AGLSAHRVEFGEDSMI 152 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG-~G~S~~~~~~~~~~~~ 152 (476)
..|..+..+...|... +..|.||++|++.+-..+. +.+++.|+++||.|+++|+-+ .|.+.....
T Consensus 9 ~~~~~~~~~~a~P~~~--~~~P~VIv~hei~Gl~~~i-----~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~------- 74 (236)
T COG0412 9 APDGELPAYLARPAGA--GGFPGVIVLHEIFGLNPHI-----RDVARRLAKAGYVVLAPDLYGRQGDPTDIED------- 74 (236)
T ss_pred CCCceEeEEEecCCcC--CCCCEEEEEecccCCchHH-----HHHHHHHHhCCcEEEechhhccCCCCCcccc-------
Confidence 3457788888877765 3348999999997777666 689999999999999999976 333321110
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.+. .++ .. + ....+..+
T Consensus 75 ---------------~~~--------~~~----------------------------~~--~---------~~~~~~~~- 91 (236)
T COG0412 75 ---------------EPA--------ELE----------------------------TG--L---------VERVDPAE- 91 (236)
T ss_pred ---------------cHH--------HHh----------------------------hh--h---------hccCCHHH-
Confidence 000 000 00 0 00011222
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchh
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPI 312 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~ 312 (476)
...|+.+.+++|.++...+.++|.++|+||||.+++.++.+.| .|++.|..-+......
T Consensus 92 ~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~------~v~a~v~fyg~~~~~~--------------- 150 (236)
T COG0412 92 VLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP------EVKAAVAFYGGLIADD--------------- 150 (236)
T ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC------CccEEEEecCCCCCCc---------------
Confidence 2489999999998887555578999999999999999998843 5777776443211000
Q ss_pred hhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCc
Q 011833 313 QALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGT 392 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 392 (476)
T Consensus 151 -------------------------------------------------------------------------------- 150 (236)
T COG0412 151 -------------------------------------------------------------------------------- 150 (236)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccc---------cCCccc
Q 011833 393 FFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGS---------RLAAYQ 461 (476)
Q Consensus 393 ~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~---------~~~~~~ 461 (476)
.....++++|+|++.|+.|..+|.+....+.+.+... .+.++++ +...| +|... ..+.+.
T Consensus 151 ---~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y-----~ga~H-~F~~~~~~~~~~y~~~aa~~ 221 (236)
T COG0412 151 ---TADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIY-----PGAGH-GFANDRADYHPGYDAAAAED 221 (236)
T ss_pred ---ccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEe-----CCCcc-ccccCCCcccccCCHHHHHH
Confidence 0124578999999999999999999999999888766 5677777 66778 33211 122367
Q ss_pred hhHHHHHHHHhhc
Q 011833 462 VYPCIIEFLTRHD 474 (476)
Q Consensus 462 v~~~i~~fL~~~~ 474 (476)
.|+.+++||+++-
T Consensus 222 a~~~~~~ff~~~~ 234 (236)
T COG0412 222 AWQRVLAFFKRLL 234 (236)
T ss_pred HHHHHHHHHHHhc
Confidence 8999999998764
|
|
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.9e-12 Score=128.76 Aligned_cols=133 Identities=17% Similarity=0.126 Sum_probs=91.0
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCC---CCcceeecCCCCCHHHHHHh-CCCcEEEecCCCCCCcc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIG---TNAIGYDLSPEYSFARYMSG-QGFDTWILEVRGAGLSA 141 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~~~L~~-~Gy~V~~~D~rG~G~S~ 141 (476)
+...+. ..+| .+.+..|.|... ..|+||++||.+ ++...| ..+.+.|+. .|+.|+++|+|......
T Consensus 58 ~~~~i~-~~~g-~i~~~~y~P~~~---~~p~vv~~HGGg~~~g~~~~~-----~~~~~~la~~~g~~Vv~vdYrlape~~ 127 (318)
T PRK10162 58 RAYMVP-TPYG-QVETRLYYPQPD---SQATLFYLHGGGFILGNLDTH-----DRIMRLLASYSGCTVIGIDYTLSPEAR 127 (318)
T ss_pred EEEEEe-cCCC-ceEEEEECCCCC---CCCEEEEEeCCcccCCCchhh-----hHHHHHHHHHcCCEEEEecCCCCCCCC
Confidence 344454 4556 577888877532 368999999976 444445 467788876 59999999999754321
Q ss_pred cccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhc
Q 011833 142 HRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDL 221 (476)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (476)
-
T Consensus 128 ~------------------------------------------------------------------------------- 128 (318)
T PRK10162 128 F------------------------------------------------------------------------------- 128 (318)
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred ccccCCCchhhhhccHHHHHHHHHHH---hCCCCCcEeEEEEchHHHHHHHHHhcCC-CCCCcccccEEEEeccccccc
Q 011833 222 IVKNDWDFDHYLEEDVPAVMEYIRTL---SKPKDGKLLAVGHSMGGILLYAMLSHCG-FEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 222 ~~~~~~~~~~~~~~Dl~a~i~~l~~~---~~~~~~ki~lvGhS~GG~ia~~~a~~~p-~~~~~~~v~~lvlla~~~~~~ 296 (476)
.. ..+|+.++++|+.++ .+.+..+++++|+|+||.+++.++.... -......+++++++.|..+..
T Consensus 129 --------p~-~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~ 198 (318)
T PRK10162 129 --------PQ-AIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLR 198 (318)
T ss_pred --------CC-cHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCC
Confidence 01 137888888888764 3444568999999999999998886432 000025688999998877643
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.2e-12 Score=121.29 Aligned_cols=112 Identities=16% Similarity=0.260 Sum_probs=83.3
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccch
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQS 171 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 171 (476)
++...|||+||+-++...-. ...++..|++.|+.++.+|++|.|.|.+.-.
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~---~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~-------------------------- 81 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAII---MKNVAKALEKEGISAFRFDFSGNGESEGSFY-------------------------- 81 (269)
T ss_pred CCceEEEEeeccccccchHH---HHHHHHHHHhcCceEEEEEecCCCCcCCccc--------------------------
Confidence 45789999999988764432 1467888999999999999999999966332
Q ss_pred hhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCC
Q 011833 172 KSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPK 251 (476)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~ 251 (476)
|..-.+..+|+..+++++....-.
T Consensus 82 -------------------------------------------------------~Gn~~~eadDL~sV~q~~s~~nr~- 105 (269)
T KOG4667|consen 82 -------------------------------------------------------YGNYNTEADDLHSVIQYFSNSNRV- 105 (269)
T ss_pred -------------------------------------------------------cCcccchHHHHHHHHHHhccCceE-
Confidence 111222348999999998764211
Q ss_pred CCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 252 DGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 252 ~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
--+++|||-||.+++.++.++. .+..++.++..++..
T Consensus 106 --v~vi~gHSkGg~Vvl~ya~K~~------d~~~viNcsGRydl~ 142 (269)
T KOG4667|consen 106 --VPVILGHSKGGDVVLLYASKYH------DIRNVINCSGRYDLK 142 (269)
T ss_pred --EEEEEeecCccHHHHHHHHhhc------CchheEEcccccchh
Confidence 2489999999999999999974 377788777766533
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.6e-12 Score=126.63 Aligned_cols=135 Identities=21% Similarity=0.223 Sum_probs=92.2
Q ss_pred CceEEEEEEEcCCCCCCCCCCcEEEecCCCCCc-ceeec---CC-CCCHHHHHHhCCCcEEEecCCCCCCcccccccCcc
Q 011833 75 SDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNA-IGYDL---SP-EYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGED 149 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~-~~~~~---~~-~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~ 149 (476)
||.+|....|.|.....++.|+||..|+.+.+. ..... .+ .......++++||.|+..|.||.|.|.+....
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~--- 77 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDP--- 77 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-T---
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcccc---
Confidence 799999999999222245678899999998653 11110 00 00112238999999999999999999764321
Q ss_pred ccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCc
Q 011833 150 SMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDF 229 (476)
Q Consensus 150 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (476)
.
T Consensus 78 ------------------------------------------------------------------------------~- 78 (272)
T PF02129_consen 78 ------------------------------------------------------------------------------M- 78 (272)
T ss_dssp ------------------------------------------------------------------------------T-
T ss_pred ------------------------------------------------------------------------------C-
Confidence 0
Q ss_pred hhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC
Q 011833 230 DHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 230 ~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~ 297 (476)
..-..+|..++|+|+.++ ...+++|.++|.|++|...+.+|+..| ..+++++...+..+...
T Consensus 79 ~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~-----p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRP-----PHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT------TTEEEEEEESE-SBTCC
T ss_pred ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCC-----CCceEEEecccCCcccc
Confidence 000147999999999887 555679999999999999999998765 88999999888766544
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.8e-11 Score=121.78 Aligned_cols=305 Identities=18% Similarity=0.179 Sum_probs=160.5
Q ss_pred CceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeec--CCCCCHHHHHHhCC-------CcEEEecCCCCC-Cccccc
Q 011833 75 SDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDL--SPEYSFARYMSGQG-------FDTWILEVRGAG-LSAHRV 144 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~--~~~~~l~~~L~~~G-------y~V~~~D~rG~G-~S~~~~ 144 (476)
++..+.+..|..-+. .+..+||++||+.+++..... .+...+.+.|..-| |.|++.|..|.+ .|+.+.
T Consensus 34 ~~~~vay~T~Gtln~--~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~ 111 (368)
T COG2021 34 SDARVAYETYGTLNA--EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPS 111 (368)
T ss_pred cCcEEEEEecccccc--cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCC
Confidence 456677777753332 356789999999886654421 11223555555544 899999999976 555544
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
..+ -+ | ..
T Consensus 112 s~~---------p~--g----------------------------~~--------------------------------- 119 (368)
T COG2021 112 SIN---------PG--G----------------------------KP--------------------------------- 119 (368)
T ss_pred CcC---------CC--C----------------------------Cc---------------------------------
Confidence 321 00 0 00
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEe-EEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHH
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLL-AVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLR 303 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~-lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~ 303 (476)
|--.|-.+..+|+..+-..+.++.|++ ++. +||-||||+.++.++..|| ++|.+++.+++..........++
T Consensus 120 yg~~FP~~ti~D~V~aq~~ll~~LGI~--~l~avvGgSmGGMqaleWa~~yP-----d~V~~~i~ia~~~r~s~~~ia~~ 192 (368)
T COG2021 120 YGSDFPVITIRDMVRAQRLLLDALGIK--KLAAVVGGSMGGMQALEWAIRYP-----DRVRRAIPIATAARLSAQNIAFN 192 (368)
T ss_pred cccCCCcccHHHHHHHHHHHHHhcCcc--eEeeeeccChHHHHHHHHHHhCh-----HHHhhhheecccccCCHHHHHHH
Confidence 001122223456666667777888886 774 9999999999999999999 89999999998655444332221
Q ss_pred Hh---hcCcchhhhcc---CCcCC-----hHHHHHhhccCCCCchHHHHHHHHhh-cCCCCCC--HHHHHHHhhhc---c
Q 011833 304 LL---LPLSDPIQALN---VPVIP-----LGTFLAAIHPFASSPPYVLSWLKFLI-SAPDMMH--PELFEKLIFSN---F 366 (476)
Q Consensus 304 ~~---~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~---~ 366 (476)
.. .=..++...-+ -...| ..+.+..+ ...+ ............ ..+.... ....+.|.... +
T Consensus 193 ~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~l-tYrS-~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf 270 (368)
T COG2021 193 EVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHL-TYRS-EEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKF 270 (368)
T ss_pred HHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHH-HccC-HHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHH
Confidence 11 11112211000 00011 11111110 0000 000000000000 0000000 01111111100 0
Q ss_pred -CCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCC
Q 011833 367 -GNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGP 445 (476)
Q Consensus 367 -~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~ 445 (476)
....+.....+...+....... +.-+..+.+++|++|+|++.=+.|.+.|++..+++.+.++.... +.+|. .
T Consensus 271 ~~rfDaNsYL~lt~ald~~D~s~--~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i~----S 343 (368)
T COG2021 271 VARFDANSYLYLTRALDYHDVSR--GRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREID----S 343 (368)
T ss_pred HhccCcchHHHHHHHHHhcCCCC--CcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEec----C
Confidence 0011111111111111111110 11122235888999999999999999999999999999998754 66652 4
Q ss_pred CCcccccccccCCccchhHHHHHHHHh
Q 011833 446 HYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 446 ~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
..||..|+ ...+.+.+.|..||+.
T Consensus 344 ~~GHDaFL---~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 344 PYGHDAFL---VESEAVGPLIRKFLAL 367 (368)
T ss_pred CCCchhhh---cchhhhhHHHHHHhhc
Confidence 66998885 3335577888899874
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.1e-12 Score=120.04 Aligned_cols=227 Identities=18% Similarity=0.301 Sum_probs=122.7
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCC-CCCccccccc
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRG-AGLSAHRVEF 146 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG-~G~S~~~~~~ 146 (476)
|-+. .++|..+.+|+..|....+.++++||+..|++....+| ..++.+|+.+||+|+.+|.-. -|.|++..
T Consensus 5 hvi~-~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~-----agLA~YL~~NGFhViRyDsl~HvGlSsG~I-- 76 (294)
T PF02273_consen 5 HVIR-LEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHF-----AGLAEYLSANGFHVIRYDSLNHVGLSSGDI-- 76 (294)
T ss_dssp EEEE-ETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGG-----HHHHHHHHTTT--EEEE---B-----------
T ss_pred ceeE-cCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHH-----HHHHHHHhhCCeEEEeccccccccCCCCCh--
Confidence 3444 57999999999999887777889999999999999999 699999999999999999875 46665532
Q ss_pred CccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccC
Q 011833 147 GEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKND 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
.+
T Consensus 77 ------------------------------------------------------------------------------~e 78 (294)
T PF02273_consen 77 ------------------------------------------------------------------------------NE 78 (294)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------------------------------hh
Confidence 14
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhh
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLL 306 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~ 306 (476)
|++.... +|+..+++|++++ +. .++.+|.-|+-|-+|+..+++ ..+.-+|+.-.+.+++..-
T Consensus 79 ftms~g~-~sL~~V~dwl~~~-g~--~~~GLIAaSLSaRIAy~Va~~-------i~lsfLitaVGVVnlr~TL------- 140 (294)
T PF02273_consen 79 FTMSIGK-ASLLTVIDWLATR-GI--RRIGLIAASLSARIAYEVAAD-------INLSFLITAVGVVNLRDTL------- 140 (294)
T ss_dssp --HHHHH-HHHHHHHHHHHHT-T-----EEEEEETTHHHHHHHHTTT-------S--SEEEEES--S-HHHHH-------
T ss_pred cchHHhH-HHHHHHHHHHHhc-CC--CcchhhhhhhhHHHHHHHhhc-------cCcceEEEEeeeeeHHHHH-------
Confidence 6666655 8999999999854 33 379999999999999999986 3466777766666554321
Q ss_pred cCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCC----CCCCHHHHHHHhhhccCCCCHHHHHHHHHHHH
Q 011833 307 PLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAP----DMMHPELFEKLIFSNFGNIPTKLISQLTTVFQ 382 (476)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (476)
.+.... .++..++....... ..++.+. |.+-+.
T Consensus 141 --------------------e~al~~----Dyl~~~i~~lp~dldfeGh~l~~~v-------------------Fv~dc~ 177 (294)
T PF02273_consen 141 --------------------EKALGY----DYLQLPIEQLPEDLDFEGHNLGAEV-------------------FVTDCF 177 (294)
T ss_dssp --------------------HHHHSS-----GGGS-GGG--SEEEETTEEEEHHH-------------------HHHHHH
T ss_pred --------------------HHHhcc----chhhcchhhCCCcccccccccchHH-------------------HHHHHH
Confidence 111110 01111111111000 0011111 111111
Q ss_pred hCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcc
Q 011833 383 EGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAH 449 (476)
Q Consensus 383 ~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH 449 (476)
+..+.+.+++ .+.++.+.+|++++++++|.++....+.++...+.+.......+ +++.|
T Consensus 178 e~~w~~l~ST---~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl-----~Gs~H 236 (294)
T PF02273_consen 178 EHGWDDLDST---INDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSL-----PGSSH 236 (294)
T ss_dssp HTT-SSHHHH---HHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEE-----TT-SS
T ss_pred HcCCccchhH---HHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEe-----cCccc
Confidence 1222211111 23677889999999999999999999999999887765444444 89999
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1e-11 Score=115.09 Aligned_cols=179 Identities=16% Similarity=0.194 Sum_probs=123.0
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccch
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQS 171 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 171 (476)
...|..|++|--.......+.+--..+++.|.++||.++.+|+||.|+|.+.-.
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD-------------------------- 79 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFD-------------------------- 79 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCccc--------------------------
Confidence 346788888865333222221111367788899999999999999999976321
Q ss_pred hhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCC
Q 011833 172 KSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPK 251 (476)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~ 251 (476)
....+ .+|..++++|++.+...
T Consensus 80 -------------------------------------------------------~GiGE--~~Da~aaldW~~~~hp~- 101 (210)
T COG2945 80 -------------------------------------------------------NGIGE--LEDAAAALDWLQARHPD- 101 (210)
T ss_pred -------------------------------------------------------CCcch--HHHHHHHHHHHHhhCCC-
Confidence 22222 36999999999988643
Q ss_pred CCcE-eEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhc
Q 011833 252 DGKL-LAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIH 330 (476)
Q Consensus 252 ~~ki-~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (476)
.+. .+.|+|+|+.|++.+|.++| .....+.+.|+....+
T Consensus 102 -s~~~~l~GfSFGa~Ia~~la~r~~------e~~~~is~~p~~~~~d--------------------------------- 141 (210)
T COG2945 102 -SASCWLAGFSFGAYIAMQLAMRRP------EILVFISILPPINAYD--------------------------------- 141 (210)
T ss_pred -chhhhhcccchHHHHHHHHHHhcc------cccceeeccCCCCchh---------------------------------
Confidence 244 77899999999999999875 1333443333321000
Q ss_pred cCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEe
Q 011833 331 PFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALA 410 (476)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~ 410 (476)
+ ..+.-..+|.++|+
T Consensus 142 --------------------------------------------------------------f---s~l~P~P~~~lvi~ 156 (210)
T COG2945 142 --------------------------------------------------------------F---SFLAPCPSPGLVIQ 156 (210)
T ss_pred --------------------------------------------------------------h---hhccCCCCCceeEe
Confidence 0 13445688999999
Q ss_pred eCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHH
Q 011833 411 ADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLT 471 (476)
Q Consensus 411 G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~ 471 (476)
|+.|.+++.+.+.+..+.++. +++++ +++.|+ +.. .-..+.+.|.+||.
T Consensus 157 g~~Ddvv~l~~~l~~~~~~~~---~~i~i-----~~a~HF---F~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 157 GDADDVVDLVAVLKWQESIKI---TVITI-----PGADHF---FHG-KLIELRDTIADFLE 205 (210)
T ss_pred cChhhhhcHHHHHHhhcCCCC---ceEEe-----cCCCce---ecc-cHHHHHHHHHHHhh
Confidence 999999999999988887543 46665 899993 222 23677888889984
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.3e-11 Score=118.41 Aligned_cols=124 Identities=18% Similarity=0.262 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhcc
Q 011833 237 VPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALN 316 (476)
Q Consensus 237 l~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (476)
+..+|+...+ .+.+..++++.|+|+||++++.++.++| ..+.++|++++........
T Consensus 90 l~~li~~~~~-~~i~~~ri~l~GFSQGa~~al~~~l~~p-----~~~~gvv~lsG~~~~~~~~----------------- 146 (216)
T PF02230_consen 90 LDELIDEEVA-YGIDPSRIFLGGFSQGAAMALYLALRYP-----EPLAGVVALSGYLPPESEL----------------- 146 (216)
T ss_dssp HHHHHHHHHH-TT--GGGEEEEEETHHHHHHHHHHHCTS-----STSSEEEEES---TTGCCC-----------------
T ss_pred HHHHHHHHHH-cCCChhheehhhhhhHHHHHHHHHHHcC-----cCcCEEEEeeccccccccc-----------------
Confidence 3444444333 2355579999999999999999999988 7899999988754211100
Q ss_pred CCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCccccc
Q 011833 317 VPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYK 396 (476)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 396 (476)
. . . .
T Consensus 147 --------------------------------------~------------~-----------------------~---~ 150 (216)
T PF02230_consen 147 --------------------------------------E------------D-----------------------R---P 150 (216)
T ss_dssp --------------------------------------H------------C-----------------------C---H
T ss_pred --------------------------------------c------------c-----------------------c---c
Confidence 0 0 0 0
Q ss_pred ccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 397 DHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 397 ~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
.... ++|++++||++|+++|.+.+++..+.+... +++++.+ ++.||-- ..+....+.+||+++
T Consensus 151 ~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~-----~g~gH~i-------~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 151 EALA--KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEY-----PGGGHEI-------SPEELRDLREFLEKH 215 (216)
T ss_dssp CCCC--TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEE-----TT-SSS---------HHHHHHHHHHHHHH
T ss_pred cccC--CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEc-----CCCCCCC-------CHHHHHHHHHHHhhh
Confidence 0111 789999999999999999888888877543 4677777 7899921 367789999999875
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.1e-10 Score=110.02 Aligned_cols=108 Identities=12% Similarity=0.086 Sum_probs=83.7
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
...+||=+||.+++...| +.+...|.+.|.+++.+|+||+|.+.+....
T Consensus 34 ~~gTVv~~hGsPGSH~DF-----kYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~-------------------------- 82 (297)
T PF06342_consen 34 PLGTVVAFHGSPGSHNDF-----KYIRPPLDEAGIRFIGINYPGFGFTPGYPDQ-------------------------- 82 (297)
T ss_pred CceeEEEecCCCCCccch-----hhhhhHHHHcCeEEEEeCCCCCCCCCCCccc--------------------------
Confidence 345899999999998888 6889999999999999999999998764431
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
.|+. .+-...++.+.+..+.+
T Consensus 83 -----------------------------------------------------~~~n-----~er~~~~~~ll~~l~i~- 103 (297)
T PF06342_consen 83 -----------------------------------------------------QYTN-----EERQNFVNALLDELGIK- 103 (297)
T ss_pred -----------------------------------------------------ccCh-----HHHHHHHHHHHHHcCCC-
Confidence 1222 23334455555666654
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~ 297 (476)
+++.++|||.||-.|+.++..+| +.++++++|+.--..
T Consensus 104 ~~~i~~gHSrGcenal~la~~~~-------~~g~~lin~~G~r~H 141 (297)
T PF06342_consen 104 GKLIFLGHSRGCENALQLAVTHP-------LHGLVLINPPGLRPH 141 (297)
T ss_pred CceEEEEeccchHHHHHHHhcCc-------cceEEEecCCccccc
Confidence 68999999999999999999865 679999998764433
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.8e-10 Score=111.08 Aligned_cols=229 Identities=15% Similarity=0.232 Sum_probs=138.5
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
.+.-++++|=-|+++..| +++.+.|.. -..++++.+||.|.--..+.
T Consensus 6 ~~~~L~cfP~AGGsa~~f-----r~W~~~lp~-~iel~avqlPGR~~r~~ep~--------------------------- 52 (244)
T COG3208 6 ARLRLFCFPHAGGSASLF-----RSWSRRLPA-DIELLAVQLPGRGDRFGEPL--------------------------- 52 (244)
T ss_pred CCceEEEecCCCCCHHHH-----HHHHhhCCc-hhheeeecCCCcccccCCcc---------------------------
Confidence 456788888888888777 678887765 48999999999986422221
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhC--C
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSK--P 250 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~--~ 250 (476)
..|+..+++.|..... .
T Consensus 53 -------------------------------------------------------------~~di~~Lad~la~el~~~~ 71 (244)
T COG3208 53 -------------------------------------------------------------LTDIESLADELANELLPPL 71 (244)
T ss_pred -------------------------------------------------------------cccHHHHHHHHHHHhcccc
Confidence 2567777777766654 3
Q ss_pred CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhc
Q 011833 251 KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIH 330 (476)
Q Consensus 251 ~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (476)
.++++.+.||||||++++..|.+.--.+ ..+.++.+.+......... + .+...+...+++.+.
T Consensus 72 ~d~P~alfGHSmGa~lAfEvArrl~~~g--~~p~~lfisg~~aP~~~~~---~------------~i~~~~D~~~l~~l~ 134 (244)
T COG3208 72 LDAPFALFGHSMGAMLAFEVARRLERAG--LPPRALFISGCRAPHYDRG---K------------QIHHLDDADFLADLV 134 (244)
T ss_pred CCCCeeecccchhHHHHHHHHHHHHHcC--CCcceEEEecCCCCCCccc---C------------CccCCCHHHHHHHHH
Confidence 4568999999999999999998743222 3366666665433211100 0 011122233333332
Q ss_pred cCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEe
Q 011833 331 PFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALA 410 (476)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~ 410 (476)
.+-..++-+ .-++|+..-+. -.+ +..+.-. +.+.|... ..++|||.++.
T Consensus 135 ~lgG~p~e~------------led~El~~l~L----------------Pil-RAD~~~~-e~Y~~~~~-~pl~~pi~~~~ 183 (244)
T COG3208 135 DLGGTPPEL------------LEDPELMALFL----------------PIL-RADFRAL-ESYRYPPP-APLACPIHAFG 183 (244)
T ss_pred HhCCCChHH------------hcCHHHHHHHH----------------HHH-HHHHHHh-cccccCCC-CCcCcceEEec
Confidence 222211100 01222222111 001 1111100 12233222 56899999999
Q ss_pred eCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 411 ADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 411 G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
|++|.++..+......+...+ ..++++| ..||+-+ .++.+++...|.+.++.+
T Consensus 184 G~~D~~vs~~~~~~W~~~t~~-~f~l~~f------dGgHFfl---~~~~~~v~~~i~~~l~~~ 236 (244)
T COG3208 184 GEKDHEVSRDELGAWREHTKG-DFTLRVF------DGGHFFL---NQQREEVLARLEQHLAHH 236 (244)
T ss_pred cCcchhccHHHHHHHHHhhcC-CceEEEe------cCcceeh---hhhHHHHHHHHHHHhhhh
Confidence 999999999999999998875 4788887 7889433 566678888888887643
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.6e-10 Score=109.08 Aligned_cols=123 Identities=13% Similarity=0.149 Sum_probs=90.0
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhh
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQA 314 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~ 314 (476)
+.+.++++.+.+..+.+..+++++|+|.|+++++....++| ..+++++++++..-....
T Consensus 81 ~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~-----~~~~~ail~~g~~~~~~~---------------- 139 (207)
T COG0400 81 EKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLP-----GLFAGAILFSGMLPLEPE---------------- 139 (207)
T ss_pred HHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCc-----hhhccchhcCCcCCCCCc----------------
Confidence 45566677777778887789999999999999999999887 678888877764321100
Q ss_pred ccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCccc
Q 011833 315 LNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFF 394 (476)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 394 (476)
T Consensus 140 -------------------------------------------------------------------------------- 139 (207)
T COG0400 140 -------------------------------------------------------------------------------- 139 (207)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCC--CceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 395 YKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPE--HLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 395 ~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~--~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
.....-..|||++||++|++||...+.++.+.+.. .++.+.++ + .|| +-+.+..+.+.+|+.+
T Consensus 140 --~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~-----~-~GH-------~i~~e~~~~~~~wl~~ 204 (207)
T COG0400 140 --LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWH-----E-GGH-------EIPPEELEAARSWLAN 204 (207)
T ss_pred --cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEe-----c-CCC-------cCCHHHHHHHHHHHHh
Confidence 00112368999999999999999888888776644 34666665 4 899 2246678888889876
Q ss_pred h
Q 011833 473 H 473 (476)
Q Consensus 473 ~ 473 (476)
.
T Consensus 205 ~ 205 (207)
T COG0400 205 T 205 (207)
T ss_pred c
Confidence 3
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.2e-10 Score=126.08 Aligned_cols=72 Identities=15% Similarity=0.155 Sum_probs=52.5
Q ss_pred cccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHH
Q 011833 394 FYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLT 471 (476)
Q Consensus 394 ~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~ 471 (476)
.|..++.++++|+|+|||..|..++++.+.++++.+... .+.+.+ ...+|.... ...+.++.+.+++|++
T Consensus 446 n~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l------~~g~H~~~~--~~~~~d~~e~~~~Wfd 517 (767)
T PRK05371 446 NYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFL------HQGGHVYPN--NWQSIDFRDTMNAWFT 517 (767)
T ss_pred CHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEE------eCCCccCCC--chhHHHHHHHHHHHHH
Confidence 344578899999999999999999999998888888542 234433 466784321 2224577888999998
Q ss_pred hh
Q 011833 472 RH 473 (476)
Q Consensus 472 ~~ 473 (476)
++
T Consensus 518 ~~ 519 (767)
T PRK05371 518 HK 519 (767)
T ss_pred hc
Confidence 75
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.6e-10 Score=121.79 Aligned_cols=55 Identities=15% Similarity=0.087 Sum_probs=46.1
Q ss_pred hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
.+++.+++++|.+..+.+-+++++|||||||.++..++.++| .+|.++++++|..
T Consensus 100 g~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p-----~rV~rItgLDPAg 154 (442)
T TIGR03230 100 GKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTK-----HKVNRITGLDPAG 154 (442)
T ss_pred HHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCC-----cceeEEEEEcCCC
Confidence 368888899887766544569999999999999999988876 7899999999854
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.15 E-value=7.7e-11 Score=117.68 Aligned_cols=55 Identities=11% Similarity=0.162 Sum_probs=46.3
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
+++..+++++.+..+.+.+++++|||||||.++..++.++| .+|+++++++|...
T Consensus 94 ~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~-----~~v~~iv~LDPa~p 148 (275)
T cd00707 94 AELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLN-----GKLGRITGLDPAGP 148 (275)
T ss_pred HHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhc-----CccceeEEecCCcc
Confidence 67888899887775544468999999999999999999876 68999999988653
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.7e-11 Score=97.56 Aligned_cols=61 Identities=21% Similarity=0.449 Sum_probs=54.0
Q ss_pred ceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccc
Q 011833 76 DWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 76 G~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
|.+|.+..|.|... .+.+|+++||+++++..| ..+++.|+++||.|+++|+||||.|.+..
T Consensus 1 G~~L~~~~w~p~~~---~k~~v~i~HG~~eh~~ry-----~~~a~~L~~~G~~V~~~D~rGhG~S~g~r 61 (79)
T PF12146_consen 1 GTKLFYRRWKPENP---PKAVVVIVHGFGEHSGRY-----AHLAEFLAEQGYAVFAYDHRGHGRSEGKR 61 (79)
T ss_pred CcEEEEEEecCCCC---CCEEEEEeCCcHHHHHHH-----HHHHHHHHhCCCEEEEECCCcCCCCCCcc
Confidence 67889999987653 588999999999999988 69999999999999999999999997533
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.6e-09 Score=100.86 Aligned_cols=60 Identities=17% Similarity=0.324 Sum_probs=42.1
Q ss_pred CCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 401 KTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 401 ~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
.+.+|.++|.+++|++||.+.++++.+.+.. ++..+ ++.||+.- .+. -.-++.+++.|++
T Consensus 112 ~l~~~~~viaS~nDp~vp~~~a~~~A~~l~a---~~~~~-----~~~GHf~~---~~G-~~~~p~~~~~l~~ 171 (171)
T PF06821_consen 112 PLPFPSIVIASDNDPYVPFERAQRLAQRLGA---ELIIL-----GGGGHFNA---ASG-FGPWPEGLDLLQR 171 (171)
T ss_dssp HHHCCEEEEEETTBSSS-HHHHHHHHHHHT----EEEEE-----TS-TTSSG---GGT-HSS-HHHHHHHH-
T ss_pred ccCCCeEEEEcCCCCccCHHHHHHHHHHcCC---CeEEC-----CCCCCccc---ccC-CCchHHHHHHhcC
Confidence 4567779999999999999999999999964 56666 89999433 222 4456777776654
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.7e-09 Score=120.07 Aligned_cols=242 Identities=15% Similarity=0.179 Sum_probs=153.2
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCc-EEEecCCCCCcceeecCCCCCHHHH-HHhCCCcEEEecCCCCCCcccccc
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHP-LLLLSGIGTNAIGYDLSPEYSFARY-MSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~-VlllHG~~~~~~~~~~~~~~~l~~~-L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
..+.. ||....+..+.|..-.+.++.| ||..||..++...... -.-.+... ....|+.|+.+|.||.|.....-.
T Consensus 501 ~~i~~--~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~-~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~ 577 (755)
T KOG2100|consen 501 GKIEI--DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSK-FSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFR 577 (755)
T ss_pred EEEEe--ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeee-EEecHHHHhhccCCeEEEEEcCCCcCCcchhHH
Confidence 34443 9999999999887765555655 5666777653221110 01244555 457899999999999987532110
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
. .+.
T Consensus 578 -----------------------------------~---~~~-------------------------------------- 581 (755)
T KOG2100|consen 578 -----------------------------------S---ALP-------------------------------------- 581 (755)
T ss_pred -----------------------------------H---Hhh--------------------------------------
Confidence 0 000
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEE-EEecccccccCChhhHHH
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASV-TTLASSLDYRPSNSLLRL 304 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~l-vlla~~~~~~~~~~~~~~ 304 (476)
-.+.++..+|...+++++.+....+..++.+.|+|.||.+++..+...| ..+.++ ++++|+.++.-..+
T Consensus 582 -~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~-----~~~fkcgvavaPVtd~~~yds---- 651 (755)
T KOG2100|consen 582 -RNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDP-----GDVFKCGVAVAPVTDWLYYDS---- 651 (755)
T ss_pred -hhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCc-----CceEEEEEEecceeeeeeecc----
Confidence 0112223578888888888888778889999999999999999998865 345444 99999887542110
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhC
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEG 384 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (476)
. +..++ + +.+......+..
T Consensus 652 ----------------------------~----~tery----m--------------------g~p~~~~~~y~e----- 670 (755)
T KOG2100|consen 652 ----------------------------T----YTERY----M--------------------GLPSENDKGYEE----- 670 (755)
T ss_pred ----------------------------c----ccHhh----c--------------------CCCccccchhhh-----
Confidence 0 00000 0 011000000000
Q ss_pred CccccCCcccccccCCCCcccE-EEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchh
Q 011833 385 GLCDRSGTFFYKDHIGKTNVPV-LALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVY 463 (476)
Q Consensus 385 ~~~~~~g~~~~~~~l~~i~vPv-Lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~ 463 (476)
......+.+++.|. |++||+.|..++.++...+.++|...++.+..+ .+|+..|. +...+.-..++
T Consensus 671 --------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~---vypde~H~--is~~~~~~~~~ 737 (755)
T KOG2100|consen 671 --------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLL---VYPDENHG--ISYVEVISHLY 737 (755)
T ss_pred --------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEE---EeCCCCcc--cccccchHHHH
Confidence 00012445556555 999999999999999999999987766665554 45999993 33344447889
Q ss_pred HHHHHHHHh
Q 011833 464 PCIIEFLTR 472 (476)
Q Consensus 464 ~~i~~fL~~ 472 (476)
..+..|+..
T Consensus 738 ~~~~~~~~~ 746 (755)
T KOG2100|consen 738 EKLDRFLRD 746 (755)
T ss_pred HHHHHHHHH
Confidence 999999873
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.7e-09 Score=104.83 Aligned_cols=110 Identities=19% Similarity=0.201 Sum_probs=77.0
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccch
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQS 171 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 171 (476)
+.=|+|||+||+......| ..+.+.+++.||-|+++|+...+......
T Consensus 15 g~yPVv~f~~G~~~~~s~Y-----s~ll~hvAShGyIVV~~d~~~~~~~~~~~--------------------------- 62 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLINSWY-----SQLLEHVASHGYIVVAPDLYSIGGPDDTD--------------------------- 62 (259)
T ss_pred CCcCEEEEeCCcCCCHHHH-----HHHHHHHHhCceEEEEecccccCCCCcch---------------------------
Confidence 4468899999999666666 68999999999999999976644321100
Q ss_pred hhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHh---
Q 011833 172 KSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLS--- 248 (476)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~--- 248 (476)
..+++.++++|+.+..
T Consensus 63 -------------------------------------------------------------~~~~~~~vi~Wl~~~L~~~ 81 (259)
T PF12740_consen 63 -------------------------------------------------------------EVASAAEVIDWLAKGLESK 81 (259)
T ss_pred -------------------------------------------------------------hHHHHHHHHHHHHhcchhh
Confidence 0234555555554422
Q ss_pred -----CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 249 -----KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 249 -----~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
..+-.++.+.|||-||-+++.++..+--.....++++++++.|+-+
T Consensus 82 l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 82 LPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred ccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 1234589999999999999998877520011258999999999764
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.1e-08 Score=107.53 Aligned_cols=215 Identities=14% Similarity=0.124 Sum_probs=116.7
Q ss_pred HHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCCh---hhHHHhh---cCcch
Q 011833 238 PAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSN---SLLRLLL---PLSDP 311 (476)
Q Consensus 238 ~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~---~~~~~~~---~~~~~ 311 (476)
.++++.+..+.... .|.++||.|+||..++.+|+.+| ..+..+|+-+++++++... ..++... .-.+.
T Consensus 126 ~~Fv~~V~~~hp~~-~kp~liGnCQgGWa~~mlAA~~P-----d~~gplvlaGaPlsywaG~~g~nPmRy~ggl~ggsw~ 199 (581)
T PF11339_consen 126 AAFVEEVAERHPDA-PKPNLIGNCQGGWAAMMLAALRP-----DLVGPLVLAGAPLSYWAGERGDNPMRYMGGLLGGSWL 199 (581)
T ss_pred HHHHHHHHHhCCCC-CCceEEeccHHHHHHHHHHhcCc-----CccCceeecCCCcccccCCCCCCcHHHhcCCCcchHH
Confidence 44556665554322 38999999999999999999998 7888999999999888632 2233221 22222
Q ss_pred hhh---ccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCC--CCCHHHHHHHhhhccCCCCHHHHHHHH-HHHHhCC
Q 011833 312 IQA---LNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPD--MMHPELFEKLIFSNFGNIPTKLISQLT-TVFQEGG 385 (476)
Q Consensus 312 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 385 (476)
... ++-+.+....+++.+..+.-...+....... +...+ .-.-..++++.. ++-.++...+.... +.|....
T Consensus 200 ~~l~sDlG~G~fdGa~lv~nFe~lnPa~~~w~K~y~L-y~~iD~e~~Rfl~FErWwg-g~~~l~~~ei~~Iv~nLFvgNr 277 (581)
T PF11339_consen 200 TALVSDLGNGRFDGAWLVQNFENLNPANTYWSKYYDL-YANIDTERERFLEFERWWG-GFYDLNGEEILWIVENLFVGNR 277 (581)
T ss_pred HHHHHHcCCCccCcHHHHhhhhccChhHHHHHHHHHH-HhccCCchhhhhHHHHHhC-CccCCCHHHHHHHHHHHhccch
Confidence 221 1223333333333333322111122111111 11111 111112333332 33356666665544 4555444
Q ss_pred ccc-----cCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHH-------HhcCCCc--eeEEEecCCCCCCCcccc
Q 011833 386 LCD-----RSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETV-------KLIPEHL--VSFKVFGEPRGPHYAHYD 451 (476)
Q Consensus 386 ~~~-----~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~-------~~l~~~~--~~~~v~~~~~~~~~gH~~ 451 (476)
+.. .+|. .-+|++|++||.++++..|.|+||+++.... +.|...+ +-|.+ .++.||++
T Consensus 278 L~~g~~~~~~G~---~~DLr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~-----h~~vGHLG 349 (581)
T PF11339_consen 278 LAKGEFRVSDGR---RVDLRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLL-----HESVGHLG 349 (581)
T ss_pred hccCceeccCCc---EeehhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEe-----cCCCCceE
Confidence 443 1221 2278999999999999999999999884432 2232222 22333 37899999
Q ss_pred cccccCCccchhHHHHH
Q 011833 452 LVGSRLAAYQVYPCIIE 468 (476)
Q Consensus 452 ~~~~~~~~~~v~~~i~~ 468 (476)
++++-.-.+.=...|+.
T Consensus 350 IFVS~~VarkEH~~i~~ 366 (581)
T PF11339_consen 350 IFVSGKVARKEHREIAS 366 (581)
T ss_pred EEeccHhhHHHHHHHHH
Confidence 98774433333333433
|
Their function is unknown. |
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.3e-10 Score=115.99 Aligned_cols=162 Identities=15% Similarity=0.176 Sum_probs=96.0
Q ss_pred CCCceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcce----ee---------cCCCCCHHHHHHhCCCcE
Q 011833 63 TADELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIG----YD---------LSPEYSFARYMSGQGFDT 129 (476)
Q Consensus 63 ~~~e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~----~~---------~~~~~~l~~~L~~~Gy~V 129 (476)
...|...+. +.++.++..+...|.+. .++-|.||++||-++.... +. -.+...++.+|+++||.|
T Consensus 86 Y~~EKv~f~-~~p~~~vpaylLvPd~~-~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVv 163 (390)
T PF12715_consen 86 YTREKVEFN-TTPGSRVPAYLLVPDGA-KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVV 163 (390)
T ss_dssp EEEEEEEE---STTB-EEEEEEEETT---S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEE
T ss_pred eEEEEEEEE-ccCCeeEEEEEEecCCC-CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEE
Confidence 344566666 57888888888888764 3567899999997665422 10 123456789999999999
Q ss_pred EEecCCCCCCcccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhcc
Q 011833 130 WILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLS 209 (476)
Q Consensus 130 ~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (476)
+++|.+|+|......... + | .+. + ...+.
T Consensus 164 la~D~~g~GER~~~e~~~----------~--~----~~~-------------------------------~----~~~la 192 (390)
T PF12715_consen 164 LAPDALGFGERGDMEGAA----------Q--G----SNY-------------------------------D----CQALA 192 (390)
T ss_dssp EEE--TTSGGG-SSCCCT----------T--T----TS-------------------------------------HHHHH
T ss_pred EEEccccccccccccccc----------c--c----cch-------------------------------h----HHHHH
Confidence 999999999864321100 0 0 000 0 00111
Q ss_pred chhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEe
Q 011833 210 TSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTL 289 (476)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvll 289 (476)
.+... --+|+..+...|...+++||.++..++.++|.++|+||||..++.+++. +++|++.|..
T Consensus 193 ~~~l~----------lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaAL------DdRIka~v~~ 256 (390)
T PF12715_consen 193 RNLLM----------LGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAAL------DDRIKATVAN 256 (390)
T ss_dssp HHHHH----------TT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-------TT--EEEEE
T ss_pred HHHHH----------cCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHc------chhhHhHhhh
Confidence 11110 1366767777788889999999988888899999999999999999998 5789988876
Q ss_pred cccc
Q 011833 290 ASSL 293 (476)
Q Consensus 290 a~~~ 293 (476)
+-..
T Consensus 257 ~~l~ 260 (390)
T PF12715_consen 257 GYLC 260 (390)
T ss_dssp S-B-
T ss_pred hhhh
Confidence 6543
|
|
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.02 E-value=1e-09 Score=109.77 Aligned_cols=64 Identities=20% Similarity=0.223 Sum_probs=44.5
Q ss_pred hccHHHHHHHHHHHhCC--CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC
Q 011833 234 EEDVPAVMEYIRTLSKP--KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~~--~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~ 297 (476)
.+||.++|+||+...+- ..+||+|+|||.|+.-++.|+...........|.++|+-+|+.|-..
T Consensus 87 ~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 87 VEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp HHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTS
T ss_pred HHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhH
Confidence 38999999999998421 33599999999999999999986431112378999999999887554
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.6e-09 Score=98.40 Aligned_cols=61 Identities=18% Similarity=0.208 Sum_probs=48.1
Q ss_pred hccHHHHHHHHHHH---hCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 234 EEDVPAVMEYIRTL---SKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~---~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
.+|+.++++++.++ .+.+.++|+++|+|-||.+++.++....-.+ ...++++++++|..++
T Consensus 49 ~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~-~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 49 LEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRG-LPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTT-TCHESEEEEESCHSST
T ss_pred ccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhc-ccchhhhhcccccccc
Confidence 38999999999887 3444569999999999999999987543111 2459999999998766
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.5e-09 Score=121.14 Aligned_cols=65 Identities=14% Similarity=0.098 Sum_probs=48.9
Q ss_pred CCCceEEEEEEEcCCCC----CCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccc
Q 011833 73 PNSDWRLALWRYLPSPA----APQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~----~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~ 142 (476)
..+|.++.+.+...+.. .....|+||++||++++...| ..+++.|+++||+|+++|+||||.|..
T Consensus 424 ~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~-----~~lA~~La~~Gy~VIaiDlpGHG~S~~ 492 (792)
T TIGR03502 424 TPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENA-----LAFAGTLAAAGVATIAIDHPLHGARSF 492 (792)
T ss_pred ecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHH-----HHHHHHHHhCCcEEEEeCCCCCCcccc
Confidence 45776665554322210 012347899999999999999 589999999999999999999999844
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.7e-09 Score=102.66 Aligned_cols=70 Identities=26% Similarity=0.329 Sum_probs=53.4
Q ss_pred cCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCce---eEEEecCCCCCCCccccccc------ccC---CccchhHH
Q 011833 398 HIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLV---SFKVFGEPRGPHYAHYDLVG------SRL---AAYQVYPC 465 (476)
Q Consensus 398 ~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~gH~~~~~------~~~---~~~~v~~~ 465 (476)
.+.++++|||++.|+.|.++|++.+..+.+++.+... .++++ ++-+| +++. .++ +.++.+..
T Consensus 159 D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f-----~g~~H-Gf~~~r~~~~~Ped~~~~eea~~~ 232 (242)
T KOG3043|consen 159 DIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTF-----SGVGH-GFVARRANISSPEDKKAAEEAYQR 232 (242)
T ss_pred HHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEc-----CCccc-hhhhhccCCCChhHHHHHHHHHHH
Confidence 4567889999999999999999999999888866433 36666 78888 4432 111 23678899
Q ss_pred HHHHHHhh
Q 011833 466 IIEFLTRH 473 (476)
Q Consensus 466 i~~fL~~~ 473 (476)
.++||+++
T Consensus 233 ~~~Wf~~y 240 (242)
T KOG3043|consen 233 FISWFKHY 240 (242)
T ss_pred HHHHHHHh
Confidence 99999876
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=98.96 E-value=7.1e-09 Score=99.32 Aligned_cols=104 Identities=22% Similarity=0.327 Sum_probs=74.9
Q ss_pred CcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhhh
Q 011833 95 HPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQ 174 (476)
Q Consensus 95 ~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (476)
++|+++|+.+++...| ..+++.|...++.|+.++.+|.+......
T Consensus 1 ~~lf~~p~~gG~~~~y-----~~la~~l~~~~~~v~~i~~~~~~~~~~~~------------------------------ 45 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSY-----RPLARALPDDVIGVYGIEYPGRGDDEPPP------------------------------ 45 (229)
T ss_dssp -EEEEESSTTCSGGGG-----HHHHHHHTTTEEEEEEECSTTSCTTSHEE------------------------------
T ss_pred CeEEEEcCCccCHHHH-----HHHHHhCCCCeEEEEEEecCCCCCCCCCC------------------------------
Confidence 4799999999999888 68999997656899999999998322111
Q ss_pred HHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCCc
Q 011833 175 LMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGK 254 (476)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~k 254 (476)
.++++++ ...++.|++.... ++
T Consensus 46 ----------------------------------------------------~si~~la----~~y~~~I~~~~~~--gp 67 (229)
T PF00975_consen 46 ----------------------------------------------------DSIEELA----SRYAEAIRARQPE--GP 67 (229)
T ss_dssp ----------------------------------------------------SSHHHHH----HHHHHHHHHHTSS--SS
T ss_pred ----------------------------------------------------CCHHHHH----HHHHHHhhhhCCC--CC
Confidence 1233333 2244555555433 48
Q ss_pred EeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 255 LLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 255 i~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
+.++|||+||.+|+.+|.+ +......|..+++++++.
T Consensus 68 ~~L~G~S~Gg~lA~E~A~~--Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 68 YVLAGWSFGGILAFEMARQ--LEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp EEEEEETHHHHHHHHHHHH--HHHTT-SESEEEEESCSS
T ss_pred eeehccCccHHHHHHHHHH--HHHhhhccCceEEecCCC
Confidence 9999999999999999976 333346799999999654
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.1e-08 Score=98.70 Aligned_cols=53 Identities=17% Similarity=0.313 Sum_probs=47.0
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
..|.++++++.++...+..+|++.|+|.||.++..+++.+| +.|+++...+..
T Consensus 79 ~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~p-----d~faa~a~~sG~ 131 (220)
T PF10503_consen 79 AFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYP-----DLFAAVAVVSGV 131 (220)
T ss_pred hhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCC-----ccceEEEeeccc
Confidence 46778899999999998899999999999999999999998 888888877654
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.7e-08 Score=99.64 Aligned_cols=158 Identities=23% Similarity=0.311 Sum_probs=95.7
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhh
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQA 314 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~ 314 (476)
+-+..++.+|+++++.. ++.+|||||||..++.++..+.-...-+.+..+|+|+++++-.........
T Consensus 87 ~wl~~vl~~L~~~Y~~~--~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~---------- 154 (255)
T PF06028_consen 87 KWLKKVLKYLKKKYHFK--KFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQN---------- 154 (255)
T ss_dssp HHHHHHHHHHHHCC--S--EEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TT----------
T ss_pred HHHHHHHHHHHHhcCCC--EEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccch----------
Confidence 56788999999998876 999999999999999999887522223479999999998763321100000
Q ss_pred ccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCccc
Q 011833 315 LNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFF 394 (476)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 394 (476)
...+.. ..+..+ .+.++.+... .
T Consensus 155 --------------~~~~~~-------------~gp~~~-~~~y~~l~~~----------------~------------- 177 (255)
T PF06028_consen 155 --------------QNDLNK-------------NGPKSM-TPMYQDLLKN----------------R------------- 177 (255)
T ss_dssp --------------TT-CST-------------T-BSS---HHHHHHHHT----------------H-------------
T ss_pred --------------hhhhcc-------------cCCccc-CHHHHHHHHH----------------H-------------
Confidence 000000 001111 1111111100 0
Q ss_pred ccccCCCCcccEEEEeeC------CCCcCCHHHHHHHHHhcCCCceeEE--EecCCCCCCCcccccccccCCccchhHHH
Q 011833 395 YKDHIGKTNVPVLALAAD------QDLICPTEAVYETVKLIPEHLVSFK--VFGEPRGPHYAHYDLVGSRLAAYQVYPCI 466 (476)
Q Consensus 395 ~~~~l~~i~vPvLii~G~------~D~~vp~~~~~~~~~~l~~~~~~~~--v~~~~~~~~~gH~~~~~~~~~~~~v~~~i 466 (476)
...+. -++.||-|.|+ .|.+||...+..+...+.+....|. ++ .++++.|..+ .+ ..+|.+.|
T Consensus 178 -~~~~p-~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v---~G~~a~HS~L---he-N~~V~~~I 248 (255)
T PF06028_consen 178 -RKNFP-KNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTV---TGKDAQHSQL---HE-NPQVDKLI 248 (255)
T ss_dssp -GGGST-TT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEE---ESGGGSCCGG---GC-CHHHHHHH
T ss_pred -HhhCC-CCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEE---ECCCCccccC---CC-CHHHHHHH
Confidence 01111 25788999999 8999999999999888876433433 33 4567899776 33 48899999
Q ss_pred HHHH
Q 011833 467 IEFL 470 (476)
Q Consensus 467 ~~fL 470 (476)
.+||
T Consensus 249 ~~FL 252 (255)
T PF06028_consen 249 IQFL 252 (255)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9998
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.6e-08 Score=98.33 Aligned_cols=132 Identities=20% Similarity=0.154 Sum_probs=87.1
Q ss_pred CceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCC-CCHHHHHHhCCCcEEEecCCCCCCcccccccCcccccc
Q 011833 75 SDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPE-YSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMIT 153 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~-~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~ 153 (476)
++..+.+..|.|...+....|+||++||.+--...- ... ..+...+...|+.|+.+|+|=.-.-
T Consensus 60 ~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~--~~~~~~~~~~~~~~g~~vv~vdYrlaPe~------------- 124 (312)
T COG0657 60 SGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSL--RTHDALVARLAAAAGAVVVSVDYRLAPEH------------- 124 (312)
T ss_pred CCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecCh--hhhHHHHHHHHHHcCCEEEecCCCCCCCC-------------
Confidence 444455777877333334579999999974322111 001 2345556678999999999865432
Q ss_pred ccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhh
Q 011833 154 SANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYL 233 (476)
Q Consensus 154 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (476)
.|...
T Consensus 125 --------------------------------------------------------------------------~~p~~- 129 (312)
T COG0657 125 --------------------------------------------------------------------------PFPAA- 129 (312)
T ss_pred --------------------------------------------------------------------------CCCch-
Confidence 11111
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~ 297 (476)
.+|+.+++.+++++. +.+.++|.++|+|-||.+++.++..-. .......++.+++.|..+...
T Consensus 130 ~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~-~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 130 LEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAAR-DRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred HHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHH-hcCCCCceEEEEEecccCCcc
Confidence 378889999998774 455578999999999999988876421 011246788999999877554
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.1e-07 Score=92.54 Aligned_cols=120 Identities=14% Similarity=0.196 Sum_probs=83.8
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhC---CCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccc
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQ---GFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQ 170 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~---Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 170 (476)
+..+|+++|-++-...| ..+...|.+. .+.|++..+.||-.+.......
T Consensus 2 ~~li~~IPGNPGlv~fY-----~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~----------------------- 53 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFY-----EEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFS----------------------- 53 (266)
T ss_pred cEEEEEECCCCChHHHH-----HHHHHHHHHhCCCCCeeEEecCCCCcCCccccccc-----------------------
Confidence 46789999999998888 5888888744 8999999999998765431100
Q ss_pred hhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCC
Q 011833 171 SKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKP 250 (476)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~ 250 (476)
.+.+ -|++++-+ +.-.++++.+......
T Consensus 54 --------------------------~~~~-------------------------~~sL~~QI-~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 54 --------------------------PNGR-------------------------LFSLQDQI-EHKIDFIKELIPQKNK 81 (266)
T ss_pred --------------------------CCCC-------------------------ccCHHHHH-HHHHHHHHHHhhhhcC
Confidence 0011 24444444 4444455555444322
Q ss_pred CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 251 KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 251 ~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
+..+++++|||.|+++++..+.+.+ ....+|..++++-|.+..
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~--~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLP--DLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhcc--ccCCceeEEEEeCCcccc
Confidence 3468999999999999999999875 223679999999987643
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.6e-08 Score=98.23 Aligned_cols=109 Identities=16% Similarity=0.168 Sum_probs=79.4
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccch
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQS 171 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 171 (476)
+.=|+|+|+||+......| ..+.+++++.||-|+++++-..- . ....
T Consensus 44 G~yPVilF~HG~~l~ns~Y-----s~lL~HIASHGfIVVAPQl~~~~-~-p~~~-------------------------- 90 (307)
T PF07224_consen 44 GTYPVILFLHGFNLYNSFY-----SQLLAHIASHGFIVVAPQLYTLF-P-PDGQ-------------------------- 90 (307)
T ss_pred CCccEEEEeechhhhhHHH-----HHHHHHHhhcCeEEEechhhccc-C-CCch--------------------------
Confidence 4468899999998887777 58899999999999999986421 1 1000
Q ss_pred hhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhC--
Q 011833 172 KSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSK-- 249 (476)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~-- 249 (476)
+ ..++..++++|+.+...
T Consensus 91 ----------------------------------------------------------~--Ei~~aa~V~~WL~~gL~~~ 110 (307)
T PF07224_consen 91 ----------------------------------------------------------D--EIKSAASVINWLPEGLQHV 110 (307)
T ss_pred ----------------------------------------------------------H--HHHHHHHHHHHHHhhhhhh
Confidence 0 02567777777765521
Q ss_pred ------CCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 250 ------PKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 250 ------~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
.+-.|+.++|||.||-.|+.+|..+. .+-++.++|.+.|+.+..
T Consensus 111 Lp~~V~~nl~klal~GHSrGGktAFAlALg~a---~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 111 LPENVEANLSKLALSGHSRGGKTAFALALGYA---TSLKFSALIGIDPVAGTS 160 (307)
T ss_pred CCCCcccccceEEEeecCCccHHHHHHHhccc---ccCchhheecccccCCCC
Confidence 22358999999999999999998764 246688999888876533
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.1e-07 Score=99.46 Aligned_cols=247 Identities=14% Similarity=0.143 Sum_probs=149.9
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCC-CcEEEecCCCCCcceeec--CCCCCHHHHHHhCCCcEEEecCCCCCCccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRN-HPLLLLSGIGTNAIGYDL--SPEYSFARYMSGQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~-~~VlllHG~~~~~~~~~~--~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~ 142 (476)
|...++ +..|.++.+-.|.|....++++ |+|+++-|..+-...... ....--...|+++||-||.+|-||.-.-..
T Consensus 614 eif~fq-s~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGl 692 (867)
T KOG2281|consen 614 EIFSFQ-SKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGL 692 (867)
T ss_pred hheeee-cCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccch
Confidence 555566 5789999999999988766655 567788887543222210 001112356889999999999999643211
Q ss_pred ccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLI 222 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (476)
.| |..+
T Consensus 693 --kF------------------------------E~~i------------------------------------------ 698 (867)
T KOG2281|consen 693 --KF------------------------------ESHI------------------------------------------ 698 (867)
T ss_pred --hh------------------------------HHHH------------------------------------------
Confidence 00 0000
Q ss_pred cccCCCchhhhhccHHHHHHHHHHHhC-CCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhh
Q 011833 223 VKNDWDFDHYLEEDVPAVMEYIRTLSK-PKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSL 301 (476)
Q Consensus 223 ~~~~~~~~~~~~~Dl~a~i~~l~~~~~-~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~ 301 (476)
...+.+.-.+|-.+.+++|.++.+ .+.+++.+-|||+||++++.++.++| .-++..|+-+|+.++.-..
T Consensus 699 ---k~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P-----~IfrvAIAGapVT~W~~YD-- 768 (867)
T KOG2281|consen 699 ---KKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYP-----NIFRVAIAGAPVTDWRLYD-- 768 (867)
T ss_pred ---hhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCc-----ceeeEEeccCcceeeeeec--
Confidence 122333345788889999998885 45679999999999999999999998 5666667666665543211
Q ss_pred HHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHH
Q 011833 302 LRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVF 381 (476)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (476)
.. ...++.+.++. +.. .| .+.....
T Consensus 769 ------------------------------Tg--------YTERYMg~P~~-nE~---gY--------~agSV~~----- 793 (867)
T KOG2281|consen 769 ------------------------------TG--------YTERYMGYPDN-NEH---GY--------GAGSVAG----- 793 (867)
T ss_pred ------------------------------cc--------chhhhcCCCcc-chh---cc--------cchhHHH-----
Confidence 00 00011111110 000 00 0000000
Q ss_pred HhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCce--eEEEecCCCCCCCcccccccccCCc
Q 011833 382 QEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLV--SFKVFGEPRGPHYAHYDLVGSRLAA 459 (476)
Q Consensus 382 ~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~--~~~v~~~~~~~~~gH~~~~~~~~~~ 459 (476)
+.+.+..=.--.|++||--|.-|.......+...+-.+++ ++++| |+--| .+-..+..
T Consensus 794 -------------~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~If-----P~ERH--siR~~es~ 853 (867)
T KOG2281|consen 794 -------------HVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIF-----PNERH--SIRNPESG 853 (867)
T ss_pred -------------HHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEc-----ccccc--ccCCCccc
Confidence 0011222233479999999999999888888887755544 45555 99999 23345555
Q ss_pred cchhHHHHHHHHh
Q 011833 460 YQVYPCIIEFLTR 472 (476)
Q Consensus 460 ~~v~~~i~~fL~~ 472 (476)
.-.-..++.||++
T Consensus 854 ~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 854 IYYEARLLHFLQE 866 (867)
T ss_pred hhHHHHHHHHHhh
Confidence 5566778889875
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.4e-07 Score=88.57 Aligned_cols=275 Identities=11% Similarity=0.056 Sum_probs=148.0
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcce-eecCCCCCHHHHHHhCCCcEEEecCCCCCCccccccc
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIG-YDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEF 146 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~-~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~ 146 (476)
|.|. |+-| .+++..+... .+++|++|=.|-+|.|... |.-.....-++.+. +.|-|+-+|.||+..-...-.
T Consensus 2 h~v~-t~~G-~v~V~v~G~~---~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p- 74 (283)
T PF03096_consen 2 HDVE-TPYG-SVHVTVQGDP---KGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLP- 74 (283)
T ss_dssp EEEE-ETTE-EEEEEEESS-----TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHH-TTSEEEEEE-TTTSTT------
T ss_pred ceec-cCce-EEEEEEEecC---CCCCceEEEeccccccchHHHHHHhcchhHHHHh-hceEEEEEeCCCCCCCccccc-
Confidence 4555 4566 4555555322 1258999999999888755 53100112234444 469999999999976322111
Q ss_pred CccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccC
Q 011833 147 GEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKND 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
. + +.-
T Consensus 75 -----------------------------------------~--------~--------------------------y~y 79 (283)
T PF03096_consen 75 -----------------------------------------E--------G--------------------------YQY 79 (283)
T ss_dssp -----------------------------------------T--------T-----------------------------
T ss_pred -----------------------------------------c--------c--------------------------ccc
Confidence 0 0 001
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhh
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLL 306 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~ 306 (476)
-|+|+++ ++++.+++++ +. +.++.+|--.|++|...+|..+| .+|.++|++++....... ..+..
T Consensus 80 Psmd~LA-e~l~~Vl~~f----~l--k~vIg~GvGAGAnIL~rfAl~~p-----~~V~GLiLvn~~~~~~gw---~Ew~~ 144 (283)
T PF03096_consen 80 PSMDQLA-EMLPEVLDHF----GL--KSVIGFGVGAGANILARFALKHP-----ERVLGLILVNPTCTAAGW---MEWFY 144 (283)
T ss_dssp --HHHHH-CTHHHHHHHH----T-----EEEEEETHHHHHHHHHHHHSG-----GGEEEEEEES---S---H---HHHHH
T ss_pred cCHHHHH-HHHHHHHHhC----Cc--cEEEEEeeccchhhhhhccccCc-----cceeEEEEEecCCCCccH---HHHHH
Confidence 2345555 7788888877 33 37999999999999999999998 999999999986543322 11111
Q ss_pred cCcchhhhccCCcCChHHHHHhhccCCCCchHHHHH-HHHhhcCC-CCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhC
Q 011833 307 PLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSW-LKFLISAP-DMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEG 384 (476)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (476)
.. +...........+.+.+. +...++.. ...+.++++.+...-.......++..|.+.+.+.
T Consensus 145 ~K----------------~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R 208 (283)
T PF03096_consen 145 QK----------------LSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSR 208 (283)
T ss_dssp HH----------------HH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-
T ss_pred HH----------------HhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 00 000000000000111111 11122210 0125566666554444456678888887776532
Q ss_pred CccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhH
Q 011833 385 GLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 385 ~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
. +....++...||+|++.|++.+.. +.+.++..++.....++..+ +++|= ++..|+|..+.+
T Consensus 209 ~--------DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv-----~dcGg---lV~eEqP~klae 270 (283)
T PF03096_consen 209 T--------DLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKV-----ADCGG---LVLEEQPGKLAE 270 (283)
T ss_dssp ------------SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEE-----TT-TT----HHHH-HHHHHH
T ss_pred c--------cchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEe-----cccCC---cccccCcHHHHH
Confidence 1 122345666799999999998874 56778888887665666666 78877 445899999999
Q ss_pred HHHHHHHhh
Q 011833 465 CIIEFLTRH 473 (476)
Q Consensus 465 ~i~~fL~~~ 473 (476)
.+.=||+..
T Consensus 271 a~~lFlQG~ 279 (283)
T PF03096_consen 271 AFKLFLQGM 279 (283)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHccC
Confidence 999999753
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=98.81 E-value=5.1e-07 Score=92.41 Aligned_cols=130 Identities=15% Similarity=0.129 Sum_probs=91.7
Q ss_pred CceEEEEEEEcCCCCCC-CCCCcEEEecCCCC-----CcceeecCCCCCHHHHH-HhCCCcEEEecCCCCCCcccccccC
Q 011833 75 SDWRLALWRYLPSPAAP-QRNHPLLLLSGIGT-----NAIGYDLSPEYSFARYM-SGQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~~-~~~~~VlllHG~~~-----~~~~~~~~~~~~l~~~L-~~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
....+..+.|.|....+ ...|.||++||.|- +...| ..+...+ .+.+..|+.+|+|=.=...-+.
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y-----~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa--- 141 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAY-----DSFCTRLAAELNCVVVSVDYRLAPEHPFPA--- 141 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchh-----HHHHHHHHHHcCeEEEecCcccCCCCCCCc---
Confidence 44457788888887755 67899999999742 33344 4666676 4569999999998653321111
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
T Consensus 142 -------------------------------------------------------------------------------- 141 (336)
T KOG1515|consen 142 -------------------------------------------------------------------------------- 141 (336)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CchhhhhccHHHHHHHHHHH----hCCCCCcEeEEEEchHHHHHHHHHhcCCCC-CCcccccEEEEecccccccC
Q 011833 228 DFDHYLEEDVPAVMEYIRTL----SKPKDGKLLAVGHSMGGILLYAMLSHCGFE-GKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~----~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~-~~~~~v~~lvlla~~~~~~~ 297 (476)
..+|.-+++.|+.++ .+.+.++++++|-|-||.++..++.+.--. ....++++.|++-|.+....
T Consensus 142 -----~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 142 -----AYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred -----cchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 136777788888775 456667999999999999998888653200 12478999999999876443
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.4e-08 Score=97.69 Aligned_cols=55 Identities=15% Similarity=0.193 Sum_probs=43.0
Q ss_pred cHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 236 DVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 236 Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
-+..+++||+++...+.++|.++|.|.||-+++.+|+.+| .|+++|+++|+.-..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~------~i~avVa~~ps~~~~ 59 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP------QISAVVAISPSSVVF 59 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS------SEEEEEEES--SB--
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC------CccEEEEeCCceeEe
Confidence 4567899999998777789999999999999999999974 699999999865433
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.78 E-value=7.6e-08 Score=100.45 Aligned_cols=41 Identities=15% Similarity=0.322 Sum_probs=28.2
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCC
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGA 137 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~ 137 (476)
++-|+|||-||++++...| ..+...||++||-|+++|+|-.
T Consensus 98 ~~~PvvIFSHGlgg~R~~y-----S~~~~eLAS~GyVV~aieHrDg 138 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSY-----SAICGELASHGYVVAAIEHRDG 138 (379)
T ss_dssp S-EEEEEEE--TT--TTTT-----HHHHHHHHHTT-EEEEE---SS
T ss_pred CCCCEEEEeCCCCcchhhH-----HHHHHHHHhCCeEEEEeccCCC
Confidence 4568899999999999888 5889999999999999999953
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.5e-08 Score=99.76 Aligned_cols=58 Identities=19% Similarity=0.193 Sum_probs=45.3
Q ss_pred ceEEEEEEEcCCCCCC----CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCC
Q 011833 76 DWRLALWRYLPSPAAP----QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAG 138 (476)
Q Consensus 76 G~~L~~~~~~p~~~~~----~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G 138 (476)
+.++.++.|.|..... ...|.|+|-||.+++...| ..+++.|++.||.|.++|++|.-
T Consensus 49 ~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~f-----~~~A~~lAs~Gf~Va~~~hpgs~ 110 (365)
T COG4188 49 DRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTGF-----AWLAEHLASYGFVVAAPDHPGSN 110 (365)
T ss_pred CCccccceeccCCCccccccCcCCeEEecCCCCCCccch-----hhhHHHHhhCceEEEeccCCCcc
Confidence 4455555555554321 3678999999999998888 57899999999999999999943
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.2e-07 Score=92.47 Aligned_cols=125 Identities=22% Similarity=0.197 Sum_probs=84.8
Q ss_pred CCCCCCCCCCcEEEecCCCCCcceeecCCCCCH-HHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcc
Q 011833 86 PSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSF-ARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTT 164 (476)
Q Consensus 86 p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l-~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~ 164 (476)
|.......+|++|.+.|.|.+.-..- ..+ +..|.+.|+..+++..+=||.-++...
T Consensus 84 P~~~~~~~rp~~IhLagTGDh~f~rR----~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q------------------- 140 (348)
T PF09752_consen 84 PKRWDSPYRPVCIHLAGTGDHGFWRR----RRLMARPLLKEGIASLILENPYYGQRKPKDQ------------------- 140 (348)
T ss_pred CCccccCCCceEEEecCCCccchhhh----hhhhhhHHHHcCcceEEEecccccccChhHh-------------------
Confidence 44332345789999999988763331 345 888888899999999999986433221
Q ss_pred cccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHH
Q 011833 165 LSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYI 244 (476)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l 244 (476)
..+.+. ++.|. +.+..-...+..+++.|+
T Consensus 141 --------------------~~s~l~--------------------~VsDl-----------~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 141 --------------------RRSSLR--------------------NVSDL-----------FVMGRATILESRALLHWL 169 (348)
T ss_pred --------------------hccccc--------------------chhHH-----------HHHHhHHHHHHHHHHHHH
Confidence 011000 11111 111222346888999999
Q ss_pred HHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 245 RTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 245 ~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
+++ +.. ++.+.|.||||.+|..+++..| ..|..+-++++.
T Consensus 170 ~~~-G~~--~~g~~G~SmGG~~A~laa~~~p-----~pv~~vp~ls~~ 209 (348)
T PF09752_consen 170 ERE-GYG--PLGLTGISMGGHMAALAASNWP-----RPVALVPCLSWS 209 (348)
T ss_pred Hhc-CCC--ceEEEEechhHhhHHhhhhcCC-----CceeEEEeeccc
Confidence 888 554 9999999999999999999988 567777777654
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.1e-07 Score=98.70 Aligned_cols=136 Identities=20% Similarity=0.166 Sum_probs=99.8
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHH---HHHhCCCcEEEecCCCCCCccccc
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFAR---YMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~---~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
..|. ..||++|+...|.|... ++.|+++..+-+.-....+...+...... .++.+||.|+..|.||.|.|.+.-
T Consensus 22 v~V~-MRDGvrL~~dIy~Pa~~--g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~ 98 (563)
T COG2936 22 VMVP-MRDGVRLAADIYRPAGA--GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVF 98 (563)
T ss_pred eeEE-ecCCeEEEEEEEccCCC--CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccc
Confidence 4566 68999999999999865 56788888884444443222222233344 688899999999999999997643
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
...
T Consensus 99 ~~~----------------------------------------------------------------------------- 101 (563)
T COG2936 99 DPE----------------------------------------------------------------------------- 101 (563)
T ss_pred cee-----------------------------------------------------------------------------
Confidence 210
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
++ . -.+|-...|+||.++ ..-++++..+|.|++|...+.+|+..| +.+++++-..+..+
T Consensus 102 --~~-~--E~~Dg~D~I~Wia~Q-pWsNG~Vgm~G~SY~g~tq~~~Aa~~p-----PaLkai~p~~~~~D 160 (563)
T COG2936 102 --SS-R--EAEDGYDTIEWLAKQ-PWSNGNVGMLGLSYLGFTQLAAAALQP-----PALKAIAPTEGLVD 160 (563)
T ss_pred --cc-c--cccchhHHHHHHHhC-CccCCeeeeecccHHHHHHHHHHhcCC-----chheeecccccccc
Confidence 01 0 136888899999885 334579999999999999999999877 77888887777666
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.69 E-value=7.8e-08 Score=93.36 Aligned_cols=57 Identities=26% Similarity=0.482 Sum_probs=40.7
Q ss_pred cHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 236 DVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 236 Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
-+...++.+.+.. ..+..++++|||||||.++-.++...+.. ...|+.+|++++|..
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~--~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYD--PDSVKTIITLGTPHR 124 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccc--cccEEEEEEEcCCCC
Confidence 4445556665554 23346899999999999998888753311 257999999998864
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.8e-07 Score=88.31 Aligned_cols=55 Identities=16% Similarity=0.063 Sum_probs=38.3
Q ss_pred CcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHH
Q 011833 402 TNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLT 471 (476)
Q Consensus 402 i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~ 471 (476)
-..+++++.++.|.+++.+.+...+.. . +.++. ++.+| . ...-++..+.|++|+.
T Consensus 133 ~~~~~lvll~~~DEvLd~~~a~~~~~~---~-~~~i~------~ggdH-~----f~~f~~~l~~i~~f~~ 187 (187)
T PF05728_consen 133 NPERYLVLLQTGDEVLDYREAVAKYRG---C-AQIIE------EGGDH-S----FQDFEEYLPQIIAFLQ 187 (187)
T ss_pred CCccEEEEEecCCcccCHHHHHHHhcC---c-eEEEE------eCCCC-C----CccHHHHHHHHHHhhC
Confidence 357999999999999999666555543 2 23443 57788 2 2234778889998873
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.1e-07 Score=87.50 Aligned_cols=134 Identities=17% Similarity=0.151 Sum_probs=87.3
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhh
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQA 314 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~ 314 (476)
.++...++++.+...-. +++.+-|||.|+.+++.+..+.- +++|.++++++..++...-
T Consensus 119 ~~~~~gv~filk~~~n~-k~l~~gGHSaGAHLa~qav~R~r----~prI~gl~l~~GvY~l~EL---------------- 177 (270)
T KOG4627|consen 119 TQFTHGVNFILKYTENT-KVLTFGGHSAGAHLAAQAVMRQR----SPRIWGLILLCGVYDLREL---------------- 177 (270)
T ss_pred HHHHHHHHHHHHhcccc-eeEEEcccchHHHHHHHHHHHhc----CchHHHHHHHhhHhhHHHH----------------
Confidence 45666777777765432 46888999999999999988742 6889999988887653321
Q ss_pred ccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCccc
Q 011833 315 LNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFF 394 (476)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 394 (476)
...-. ...+ .++.+ +. ...+ -+
T Consensus 178 ---------------~~te~---------g~dl----gLt~~----------------~a----------e~~S----cd 199 (270)
T KOG4627|consen 178 ---------------SNTES---------GNDL----GLTER----------------NA----------ESVS----CD 199 (270)
T ss_pred ---------------hCCcc---------cccc----Ccccc----------------hh----------hhcC----cc
Confidence 00000 0000 00000 00 0000 00
Q ss_pred ccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccc
Q 011833 395 YKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGS 455 (476)
Q Consensus 395 ~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~ 455 (476)
...+..+++|+|++.|.+|.---.++.+.+...+..+ ++..| ++++|++++..
T Consensus 200 -l~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a--~~~~f-----~n~~hy~I~~~ 252 (270)
T KOG4627|consen 200 -LWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKA--SFTLF-----KNYDHYDIIEE 252 (270)
T ss_pred -HHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhc--ceeec-----CCcchhhHHHH
Confidence 1245678999999999999876678888999988876 67777 89999998633
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.3e-06 Score=88.00 Aligned_cols=61 Identities=20% Similarity=0.283 Sum_probs=45.8
Q ss_pred CcccEEEEeeCCCCcCCHHHHHHHHHhcCCC---ceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 402 TNVPVLALAADQDLICPTEAVYETVKLIPEH---LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 402 i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~---~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
.++|+++.+|..|.++|+..+.++.+.+... .++++.+ +..+|.... ..-.+..++||..+
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~-----~~~~H~~~~------~~~~~~a~~Wl~~r 281 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRY-----PGGGHLGAA------FASAPDALAWLDDR 281 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEec-----CCCChhhhh------hcCcHHHHHHHHHH
Confidence 4799999999999999999999988877443 4666654 778895432 23347788888754
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.5e-05 Score=78.85 Aligned_cols=280 Identities=10% Similarity=0.070 Sum_probs=164.8
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcce-eecCCCCCHHHHHHhCCCcEEEecCCCCCCccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIG-YDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~-~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
.+|.|. |..|. +++..+.-. .+.+|++|=.|.++.|... |.......-+..+.++ |-|+-+|.+|+-.-...-
T Consensus 23 ~e~~V~-T~~G~-v~V~V~Gd~---~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~ 96 (326)
T KOG2931|consen 23 QEHDVE-TAHGV-VHVTVYGDP---KGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSF 96 (326)
T ss_pred eeeeec-ccccc-EEEEEecCC---CCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccC
Confidence 567777 45564 455554321 1257889999999888755 5311112334555566 999999999985432110
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
. +|+|
T Consensus 97 p--------------------------------------------------~~y~------------------------- 101 (326)
T KOG2931|consen 97 P--------------------------------------------------EGYP------------------------- 101 (326)
T ss_pred C--------------------------------------------------CCCC-------------------------
Confidence 0 0000
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHH
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRL 304 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~ 304 (476)
--++|+.+ +++..+++++ +.+ .++-+|---|++|...+|..+| ++|.++|++++...... ++.+
T Consensus 102 -yPsmd~LA-d~l~~VL~~f----~lk--~vIg~GvGAGAyIL~rFAl~hp-----~rV~GLvLIn~~~~a~g---wiew 165 (326)
T KOG2931|consen 102 -YPSMDDLA-DMLPEVLDHF----GLK--SVIGMGVGAGAYILARFALNHP-----ERVLGLVLINCDPCAKG---WIEW 165 (326)
T ss_pred -CCCHHHHH-HHHHHHHHhc----Ccc--eEEEecccccHHHHHHHHhcCh-----hheeEEEEEecCCCCch---HHHH
Confidence 01234444 6666666665 333 7999999999999999999998 99999999987543222 1111
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcC-CCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHh
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISA-PDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQE 383 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (476)
...... ..++.... + +. ....-.+...++. ...-+.++.+.|...--......++..|...+..
T Consensus 166 ~~~K~~------------s~~l~~~G-m-t~-~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~ 230 (326)
T KOG2931|consen 166 AYNKVS------------SNLLYYYG-M-TQ-GVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNG 230 (326)
T ss_pred HHHHHH------------HHHHHhhc-h-hh-hHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcC
Confidence 110000 00000000 0 00 0001112223332 2233667777666554445566777777776653
Q ss_pred C-CccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccch
Q 011833 384 G-GLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQV 462 (476)
Q Consensus 384 ~-~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v 462 (476)
. .+...... ....++||+|++.|++-+.+ +.+.+...++......+..+ .++|- +...++|..+
T Consensus 231 R~DL~~~r~~-----~~~tlkc~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~-----~d~g~---l~~e~qP~kl 295 (326)
T KOG2931|consen 231 RRDLSIERPK-----LGTTLKCPVLLVVGDNSPHV--SAVVECNSKLDPTYTTLLKM-----ADCGG---LVQEEQPGKL 295 (326)
T ss_pred CCCccccCCC-----cCccccccEEEEecCCCchh--hhhhhhhcccCcccceEEEE-----cccCC---cccccCchHH
Confidence 2 23321111 12267899999999998775 46777777776555566665 68887 6668899999
Q ss_pred hHHHHHHHHh
Q 011833 463 YPCIIEFLTR 472 (476)
Q Consensus 463 ~~~i~~fL~~ 472 (476)
.+.+.=||+.
T Consensus 296 ~ea~~~FlqG 305 (326)
T KOG2931|consen 296 AEAFKYFLQG 305 (326)
T ss_pred HHHHHHHHcc
Confidence 9999999875
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.6e-07 Score=89.17 Aligned_cols=91 Identities=22% Similarity=0.354 Sum_probs=57.4
Q ss_pred CCcEEEecCCCC-CcceeecCCCCCHHHHHHhCCCc---EEEecCCCCCCcccccccCccccccccccccCCCccccccc
Q 011833 94 NHPLLLLSGIGT-NAIGYDLSPEYSFARYMSGQGFD---TWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRES 169 (476)
Q Consensus 94 ~~~VlllHG~~~-~~~~~~~~~~~~l~~~L~~~Gy~---V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 169 (476)
+.||||+||.++ ....| ..++++|.++||. |+++++-....+.....
T Consensus 1 ~~PVVlVHG~~~~~~~~w-----~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~------------------------ 51 (219)
T PF01674_consen 1 NRPVVLVHGTGGNAYSNW-----STLAPYLKAAGYCDSEVYALTYGSGNGSPSVQN------------------------ 51 (219)
T ss_dssp S--EEEE--TTTTTCGGC-----CHHHHHHHHTT--CCCEEEE--S-CCHHTHHHH------------------------
T ss_pred CCCEEEECCCCcchhhCH-----HHHHHHHHHcCCCcceeEeccCCCCCCCCcccc------------------------
Confidence 368999999998 55779 5899999999998 89999844332111000
Q ss_pred chhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhC
Q 011833 170 QSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSK 249 (476)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~ 249 (476)
.... -+++ ..+.++|+.+++.++
T Consensus 52 --------------------------------------~~~~------------------~~~~-~~l~~fI~~Vl~~TG 74 (219)
T PF01674_consen 52 --------------------------------------AHMS------------------CESA-KQLRAFIDAVLAYTG 74 (219)
T ss_dssp --------------------------------------HHB-------------------HHHH-HHHHHHHHHHHHHHT
T ss_pred --------------------------------------cccc------------------hhhH-HHHHHHHHHHHHhhC
Confidence 0000 1112 678899999999987
Q ss_pred CCCCcEeEEEEchHHHHHHHHHhc
Q 011833 250 PKDGKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 250 ~~~~ki~lvGhS~GG~ia~~~a~~ 273 (476)
. |+.+|||||||.++-.+...
T Consensus 75 a---kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 75 A---KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp -----EEEEEETCHHHHHHHHHHH
T ss_pred C---EEEEEEcCCcCHHHHHHHHH
Confidence 6 89999999999998777753
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.44 E-value=5.1e-06 Score=75.49 Aligned_cols=45 Identities=13% Similarity=0.209 Sum_probs=33.5
Q ss_pred ccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcc
Q 011833 397 DHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAH 449 (476)
Q Consensus 397 ~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH 449 (476)
+++..+++|+||.+|+.|.+-.-+.+..+. +. ..++++++ .++.|
T Consensus 136 ~HL~gl~tPtli~qGtrD~fGtr~~Va~y~--ls-~~iev~wl-----~~adH 180 (213)
T COG3571 136 EHLTGLKTPTLITQGTRDEFGTRDEVAGYA--LS-DPIEVVWL-----EDADH 180 (213)
T ss_pred hhccCCCCCeEEeecccccccCHHHHHhhh--cC-CceEEEEe-----ccCcc
Confidence 378889999999999999998777763332 33 23677777 56777
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.8e-07 Score=88.51 Aligned_cols=43 Identities=16% Similarity=0.265 Sum_probs=30.9
Q ss_pred CCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcc
Q 011833 400 GKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAH 449 (476)
Q Consensus 400 ~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH 449 (476)
.+|++|+|.|+|.+|.+++++..+.+.+...+. ..+.. ...||
T Consensus 158 ~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~-~~v~~------h~gGH 200 (212)
T PF03959_consen 158 PKISIPTLHVIGENDPVVPPERSEALAEMFDPD-ARVIE------HDGGH 200 (212)
T ss_dssp TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH-EEEEE------ESSSS
T ss_pred ccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC-cEEEE------ECCCC
Confidence 457999999999999999999999999988763 34444 37888
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.39 E-value=6.8e-06 Score=79.73 Aligned_cols=58 Identities=26% Similarity=0.357 Sum_probs=49.4
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
.-+..++.+|+++++.+ ++.+|||||||.-...++..+.....-+.++.+|.++.++.
T Consensus 120 ~wlk~~msyL~~~Y~i~--k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 120 KWLKKAMSYLQKHYNIP--KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHHhcCCc--eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 56788999999999887 99999999999999999988773333467899999998875
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.4e-06 Score=86.63 Aligned_cols=119 Identities=18% Similarity=0.281 Sum_probs=85.4
Q ss_pred CCceEEEEEEEcCCCCCCC-CCCcEEEecCCCCCcceeecCCCCCHHHHHHhC---------CCcEEEecCCCCCCcccc
Q 011833 74 NSDWRLALWRYLPSPAAPQ-RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQ---------GFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~-~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~---------Gy~V~~~D~rG~G~S~~~ 143 (476)
-.|..++..+..|.....+ +-.|+|++|||+++-..| ..++..|.+- -|.|+++-++|+|.|+.+
T Consensus 131 IeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EF-----ykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~ 205 (469)
T KOG2565|consen 131 IEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREF-----YKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAP 205 (469)
T ss_pred hcceeEEEEEecCCccccCCcccceEEecCCCchHHHH-----HhhhhhhcCccccCCccceeEEEeccCCCCcccCcCC
Confidence 3799999988877654222 335899999999988776 3566666443 379999999999999875
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
... |
T Consensus 206 sk~--------------G-------------------------------------------------------------- 209 (469)
T KOG2565|consen 206 SKT--------------G-------------------------------------------------------------- 209 (469)
T ss_pred ccC--------------C--------------------------------------------------------------
Confidence 431 0
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEE
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTT 288 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvl 288 (476)
|. ..-++.++.-|.-+.+.+ +..+-|--||++|+-.+|..+| +.|.++=+
T Consensus 210 -----Fn---~~a~ArvmrkLMlRLg~n--kffiqGgDwGSiI~snlasLyP-----enV~GlHl 259 (469)
T KOG2565|consen 210 -----FN---AAATARVMRKLMLRLGYN--KFFIQGGDWGSIIGSNLASLYP-----ENVLGLHL 259 (469)
T ss_pred -----cc---HHHHHHHHHHHHHHhCcc--eeEeecCchHHHHHHHHHhhcc-----hhhhHhhh
Confidence 00 123444555555556654 9999999999999999999999 66766543
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.36 E-value=1e-05 Score=77.13 Aligned_cols=63 Identities=16% Similarity=0.164 Sum_probs=49.6
Q ss_pred cCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 398 HIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 398 ~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
+...+++|.|-|.|+.|.++|.+.+..+++.++++ ..+. ...|| ++ .+.....+.|++||+..
T Consensus 158 ~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a---~vl~-----HpggH--~V---P~~~~~~~~i~~fi~~~ 220 (230)
T KOG2551|consen 158 YKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA---TVLE-----HPGGH--IV---PNKAKYKEKIADFIQSF 220 (230)
T ss_pred hccCCCCCeeEEecccceeecchHHHHHHHhcCCC---eEEe-----cCCCc--cC---CCchHHHHHHHHHHHHH
Confidence 34568999999999999999999999999999986 2332 57889 22 23457788899998764
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.6e-05 Score=82.56 Aligned_cols=68 Identities=19% Similarity=0.101 Sum_probs=48.1
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcCCC---------ceeE-----------EEec--------CCCCCCCccccccc
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIPEH---------LVSF-----------KVFG--------EPRGPHYAHYDLVG 454 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~~~---------~~~~-----------~v~~--------~~~~~~~gH~~~~~ 454 (476)
.++||+..|+.|.+|+....+++.+.++-. ...+ +.++ ...++++|| +.
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH---~v 440 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGH---MV 440 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCc---cC
Confidence 589999999999999998888888766410 0011 0110 001258999 66
Q ss_pred ccCCccchhHHHHHHHHhh
Q 011833 455 SRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 455 ~~~~~~~v~~~i~~fL~~~ 473 (476)
..+.|+.++..|..|+...
T Consensus 441 p~d~P~~~~~~i~~fl~~~ 459 (462)
T PTZ00472 441 PMDQPAVALTMINRFLRNR 459 (462)
T ss_pred hhhHHHHHHHHHHHHHcCC
Confidence 6788999999999999754
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.30 E-value=8.7e-07 Score=94.01 Aligned_cols=57 Identities=23% Similarity=0.286 Sum_probs=45.5
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
+++.+.++.+.+..+.. ++++|||||||.++..++..+|-. ....|+++|+++++..
T Consensus 146 ~~Lk~lIe~~~~~~g~~--kV~LVGHSMGGlva~~fl~~~p~~-~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 146 DGLKKKLETVYKASGGK--KVNIISHSMGGLLVKCFMSLHSDV-FEKYVNSWIAIAAPFQ 202 (440)
T ss_pred HHHHHHHHHHHHHcCCC--CEEEEEECHhHHHHHHHHHHCCHh-HHhHhccEEEECCCCC
Confidence 68888888887776543 899999999999999999887711 1256899999998754
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.6e-05 Score=78.75 Aligned_cols=52 Identities=17% Similarity=0.324 Sum_probs=43.0
Q ss_pred cHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 236 DVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 236 Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
-+..+.+.+..++..+..+|.++|.|+||.-++.++.++| +.+++.+.++.-
T Consensus 252 ~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfP-----dfFAaa~~iaG~ 303 (387)
T COG4099 252 KIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFP-----DFFAAAVPIAGG 303 (387)
T ss_pred HHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCc-----hhhheeeeecCC
Confidence 3444445777888888899999999999999999999998 778888887764
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.23 E-value=4.3e-06 Score=78.51 Aligned_cols=57 Identities=19% Similarity=0.227 Sum_probs=46.0
Q ss_pred hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
..|+..+|++.+++.+.+ ++.|||+|+|+-+.-...-+.|-..+ .+|+.++++++..
T Consensus 51 a~Dl~~~i~~y~~~w~~~--~vvLiGYSFGADvlP~~~nrLp~~~r-~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 51 AADLARIIRHYRARWGRK--RVVLIGYSFGADVLPFIYNRLPAALR-ARVAQVVLLSPST 107 (192)
T ss_pred HHHHHHHHHHHHHHhCCc--eEEEEeecCCchhHHHHHhhCCHHHH-hheeEEEEeccCC
Confidence 479999999998887765 99999999999877777766662222 6799999999864
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.8e-05 Score=73.03 Aligned_cols=66 Identities=12% Similarity=0.056 Sum_probs=47.8
Q ss_pred CCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 399 IGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 399 l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
...+.-|.++++..+|+.|+.+.++.+.+.+.+. +... .+.||..--.+...-.+.+..+.+|+.+
T Consensus 113 ~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~---lv~~-----g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 113 REPLPFPSVVVASRNDPYVSYEHAEDLANAWGSA---LVDV-----GEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred cccCCCceeEEEecCCCCCCHHHHHHHHHhccHh---heec-----ccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 3456789999999999999999999999999875 4443 6889954333334445566666666544
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.9e-06 Score=82.90 Aligned_cols=104 Identities=19% Similarity=0.346 Sum_probs=78.8
Q ss_pred CcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhhh
Q 011833 95 HPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQ 174 (476)
Q Consensus 95 ~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (476)
|||+++|+.++...+| ..++.+|... ..|+.++.||.|.-....
T Consensus 1 ~pLF~fhp~~G~~~~~-----~~L~~~l~~~-~~v~~l~a~g~~~~~~~~------------------------------ 44 (257)
T COG3319 1 PPLFCFHPAGGSVLAY-----APLAAALGPL-LPVYGLQAPGYGAGEQPF------------------------------ 44 (257)
T ss_pred CCEEEEcCCCCcHHHH-----HHHHHHhccC-ceeeccccCccccccccc------------------------------
Confidence 5899999999999899 6888999876 899999999998421110
Q ss_pred HHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCCc
Q 011833 175 LMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGK 254 (476)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~k 254 (476)
-++++++ ...++.|++.. +.++
T Consensus 45 ----------------------------------------------------~~l~~~a----~~yv~~Ir~~Q--P~GP 66 (257)
T COG3319 45 ----------------------------------------------------ASLDDMA----AAYVAAIRRVQ--PEGP 66 (257)
T ss_pred ----------------------------------------------------CCHHHHH----HHHHHHHHHhC--CCCC
Confidence 1223333 34456666654 3459
Q ss_pred EeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 255 LLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 255 i~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
++++|||+||.+++.+|.+ +..+...|+.++++.++..
T Consensus 67 y~L~G~S~GG~vA~evA~q--L~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 67 YVLLGWSLGGAVAFEVAAQ--LEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred EEEEeeccccHHHHHHHHH--HHhCCCeEEEEEEeccCCC
Confidence 9999999999999999986 4445578999999998766
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.00024 Score=72.37 Aligned_cols=166 Identities=20% Similarity=0.290 Sum_probs=91.0
Q ss_pred CceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCC--CCCccc
Q 011833 65 DELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRG--AGLSAH 142 (476)
Q Consensus 65 ~e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG--~G~S~~ 142 (476)
+|..++. ..+...+.+|+ |... ...+..||++||.+.+.+.-. -...+.+.|.+.|+.++++.++. ...+..
T Consensus 62 ~e~~~L~-~~~~~flaL~~--~~~~-~~~~G~vIilp~~g~~~d~p~--~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~ 135 (310)
T PF12048_consen 62 DEVQWLQ-AGEERFLALWR--PANS-AKPQGAVIILPDWGEHPDWPG--LIAPLRRELPDHGWATLSITLPDPAPPASPN 135 (310)
T ss_pred hhcEEee-cCCEEEEEEEe--cccC-CCCceEEEEecCCCCCCCcHh--HHHHHHHHhhhcCceEEEecCCCcccccCCc
Confidence 5666776 35555566654 5443 235689999999999874321 01356677889999999999887 221111
Q ss_pred ccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLI 222 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (476)
... +.+-.+++ |......++ +.|..-..++ .+.+
T Consensus 136 ~~~--~~~~~~~a-----~~~~~~~~~---------------------------~~~~~~~~~~-----~~~~------- 169 (310)
T PF12048_consen 136 RAT--EAEEVPSA-----GDQQLSQPS---------------------------DEPSPASAQE-----AEAR------- 169 (310)
T ss_pred cCC--CCCCCCCC-----CCCCcCCCC---------------------------CCCccccccH-----hHHh-------
Confidence 100 00000000 000000000 0000000000 0000
Q ss_pred cccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 223 VKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 223 ~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
-.....+..-+.+++.++.++.+ .++++|||+.|+.+++.+++..+ ...+.++|++++..
T Consensus 170 ----~~~~~~~~ari~Aa~~~~~~~~~---~~ivlIg~G~gA~~~~~~la~~~----~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 170 ----EAYEERLFARIEAAIAFAQQQGG---KNIVLIGHGTGAGWAARYLAEKP----PPMPDALVLINAYW 229 (310)
T ss_pred ----HHHHHHHHHHHHHHHHHHHhcCC---ceEEEEEeChhHHHHHHHHhcCC----CcccCeEEEEeCCC
Confidence 00112233566777777766532 25999999999999999998866 45688999998754
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.07 E-value=2.2e-05 Score=77.99 Aligned_cols=137 Identities=15% Similarity=0.163 Sum_probs=91.7
Q ss_pred CCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHH-hCCCcEEEecCCCCCCcccccccCccccc
Q 011833 74 NSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMS-GQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~-~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
.+|....++.|.|... +...|.||+|||-.++...+.-. ..+ ..|+ +.||-|+.+|-- ..+-+.
T Consensus 42 ~~g~~r~y~l~vP~g~-~~~apLvv~LHG~~~sgag~~~~--sg~-d~lAd~~gFlV~yPdg~--~~~wn~--------- 106 (312)
T COG3509 42 VNGLKRSYRLYVPPGL-PSGAPLVVVLHGSGGSGAGQLHG--TGW-DALADREGFLVAYPDGY--DRAWNA--------- 106 (312)
T ss_pred cCCCccceEEEcCCCC-CCCCCEEEEEecCCCChHHhhcc--cch-hhhhcccCcEEECcCcc--ccccCC---------
Confidence 4888899999988765 34458899999998888666310 122 3444 569999988522 111100
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
+ |....+++.+. --+.||
T Consensus 107 -----~--~~~~~~~p~~~------------------------------------------------------~~g~dd- 124 (312)
T COG3509 107 -----N--GCGNWFGPADR------------------------------------------------------RRGVDD- 124 (312)
T ss_pred -----C--cccccCCcccc------------------------------------------------------cCCccH-
Confidence 0 00011111100 001122
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
..++.++++.+.+..+++..+|++.|.|-||.++..+++.+| +.++++..+++..
T Consensus 125 -Vgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p-----~~faa~A~VAg~~ 179 (312)
T COG3509 125 -VGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYP-----DIFAAIAPVAGLL 179 (312)
T ss_pred -HHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCc-----ccccceeeeeccc
Confidence 257888999999999998899999999999999999999998 7788888887655
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.4e-05 Score=75.67 Aligned_cols=146 Identities=21% Similarity=0.292 Sum_probs=89.1
Q ss_pred EEEEEEcCCCCCCC-CCCcEEEecCCCCCcceeecCCCCC-HHHHHHhCCCcEEEecC--CCCCCcccccccCccccccc
Q 011833 79 LALWRYLPSPAAPQ-RNHPLLLLSGIGTNAIGYDLSPEYS-FARYMSGQGFDTWILEV--RGAGLSAHRVEFGEDSMITS 154 (476)
Q Consensus 79 L~~~~~~p~~~~~~-~~~~VlllHG~~~~~~~~~~~~~~~-l~~~L~~~Gy~V~~~D~--rG~G~S~~~~~~~~~~~~~~ 154 (476)
...-.|.|.....+ +-|++.++.|+.+....+. +.+ +-+..+..|+.|+++|- ||.--.......+
T Consensus 28 Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi---~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswD------- 97 (283)
T KOG3101|consen 28 MTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFI---EKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWD------- 97 (283)
T ss_pred eEEEEecCCCcccCCcCceEEEecCCcccchhhH---hhhhHHHhHhhcCeEEECCCCCCCccccCCCccccc-------
Confidence 44445556443333 3688999999988887763 122 23344567999999996 4432211111111
Q ss_pred cccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhh
Q 011833 155 ANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLE 234 (476)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (476)
+|.+..+.-+ ++.|.|. ..|.+=+|+.
T Consensus 98 -----FG~GAGFYvn----------------------------------------At~epw~--------~~yrMYdYv~ 124 (283)
T KOG3101|consen 98 -----FGQGAGFYVN----------------------------------------ATQEPWA--------KHYRMYDYVV 124 (283)
T ss_pred -----ccCCceeEEe----------------------------------------cccchHh--------hhhhHHHHHH
Confidence 3444433332 3344442 2477888888
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
+.++..++.- ....+..++.+.||||||.=++..+.+.| .+.+++-+.+|...
T Consensus 125 kELp~~l~~~--~~pld~~k~~IfGHSMGGhGAl~~~Lkn~-----~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 125 KELPQLLNSA--NVPLDPLKVGIFGHSMGGHGALTIYLKNP-----SKYKSVSAFAPICN 177 (283)
T ss_pred HHHHHHhccc--cccccchhcceeccccCCCceEEEEEcCc-----ccccceeccccccC
Confidence 8777777632 22334458999999999998888887766 56777777776544
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.06 E-value=4.9e-05 Score=77.05 Aligned_cols=130 Identities=17% Similarity=0.249 Sum_probs=85.2
Q ss_pred eCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeec-C-CCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcc
Q 011833 72 VPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDL-S-PEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGED 149 (476)
Q Consensus 72 ~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~-~-~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~ 149 (476)
+..|++.+......-+. ......||++-|-++......+ . ....+.+...+.|-.|+.+|+||.|.|.+...
T Consensus 117 Iq~D~~~IDt~~I~~~~--a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s---- 190 (365)
T PF05677_consen 117 IQYDGVKIDTMAIHQPE--AKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPS---- 190 (365)
T ss_pred EeeCCEEEEEEEeeCCC--CCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCC----
Confidence 34599999876664222 2356788888887655544110 0 01123344446799999999999999976442
Q ss_pred ccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCc
Q 011833 150 SMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDF 229 (476)
Q Consensus 150 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (476)
.
T Consensus 191 -------------------------------------------------------------------------------~ 191 (365)
T PF05677_consen 191 -------------------------------------------------------------------------------R 191 (365)
T ss_pred -------------------------------------------------------------------------------H
Confidence 1
Q ss_pred hhhhhccHHHHHHHHHHHh-CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEE
Q 011833 230 DHYLEEDVPAVMEYIRTLS-KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTT 288 (476)
Q Consensus 230 ~~~~~~Dl~a~i~~l~~~~-~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvl 288 (476)
+++ ..|-.++++|++++. +.+...|.+.|||+||.++..++....+.+. +.|+=+++
T Consensus 192 ~dL-v~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~-dgi~~~~i 249 (365)
T PF05677_consen 192 KDL-VKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGS-DGIRWFLI 249 (365)
T ss_pred HHH-HHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccC-CCeeEEEE
Confidence 222 378899999998743 5555689999999999999887766543322 34544443
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00011 Score=72.78 Aligned_cols=234 Identities=18% Similarity=0.275 Sum_probs=124.1
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHh
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLL 305 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~ 305 (476)
.|+++||+ +-+.++++++ |. .+++++.|+-+.-.+.+.+.-.-.+....-.++++++++++.+...+....+
T Consensus 150 ~FdldDYI-dyvie~~~~~----Gp---~~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~nPTavN~l 221 (415)
T COG4553 150 HFDLDDYI-DYVIEMINFL----GP---DAHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARKNPTAVNEL 221 (415)
T ss_pred CccHHHHH-HHHHHHHHHh----CC---CCcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccccCcHHHhHh
Confidence 36677777 4444444444 33 5899999998865544443321111124567999999999988766555444
Q ss_pred hc---Ccchhhhc--cCCc-CC------hHHHHHh--hccCCCCchHHHH---HHHHhhcCCCCCCHHHHHHHhhhcc--
Q 011833 306 LP---LSDPIQAL--NVPV-IP------LGTFLAA--IHPFASSPPYVLS---WLKFLISAPDMMHPELFEKLIFSNF-- 366 (476)
Q Consensus 306 ~~---~~~~~~~~--~~~~-~~------~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-- 366 (476)
.. +.+-.+.. .++. .| ...+++. +... .....+.+ .+..++. .+.-+.+.-.+++....
T Consensus 222 A~~k~~~WF~~n~vm~vP~~ypg~gR~VYPGFlQlagFmsm-NldrH~~aH~~~~~~Lv~-~D~~~Ae~h~~FYdEYlav 299 (415)
T COG4553 222 ATEKSIEWFRDNVVMQVPPPYPGFGRRVYPGFLQLAGFMSM-NLDRHIDAHKDFFLSLVK-NDGDSAEKHREFYDEYLAV 299 (415)
T ss_pred hhccchHHHHhCeeeecCCCCCCccccccccHHHhhhHhhc-ChhhhHHHHHHHHHHHHc-ccchhHHHHHHHHHHHHHH
Confidence 31 11111111 1110 00 0111211 1111 00111111 1111111 12222232223322221
Q ss_pred CCCCHHHHHHH-HHHHHhCCccccCCcccccc---cCCCC-cccEEEEeeCCCCcCCH---HHHHHHHHhcCCCceeEEE
Q 011833 367 GNIPTKLISQL-TTVFQEGGLCDRSGTFFYKD---HIGKT-NVPVLALAADQDLICPT---EAVYETVKLIPEHLVSFKV 438 (476)
Q Consensus 367 ~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~---~l~~i-~vPvLii~G~~D~~vp~---~~~~~~~~~l~~~~~~~~v 438 (476)
.+.++....|- ..+|+...+.. |...... ....| ++-.+-|-|++|.|.-. +.+..++..||+..+....
T Consensus 300 mdl~aEfYLqTid~VFqq~~Lpk--G~~vhrg~~vdp~~I~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~ 377 (415)
T COG4553 300 MDLTAEFYLQTIDEVFQQHALPK--GEMVHRGKPVDPTAITNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYM 377 (415)
T ss_pred ccchHHHHHHHHHHHHHHhcccC--CceeecCCcCChhheeceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhc
Confidence 25666655553 33444333332 1111100 22233 47789999999998654 5577788888876555555
Q ss_pred ecCCCCCCCcccccccccCCccchhHHHHHHHHhhcCC
Q 011833 439 FGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHDMT 476 (476)
Q Consensus 439 ~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~~~ 476 (476)
- |+.||++.+.+..-++++++.|.+|+.+++.+
T Consensus 378 q-----p~vGHYGVFnGsrfr~eIvPri~dFI~~~d~~ 410 (415)
T COG4553 378 Q-----PDVGHYGVFNGSRFREEIVPRIRDFIRRYDRS 410 (415)
T ss_pred C-----CCCCccceeccchHHHHHHHHHHHHHHHhCcc
Confidence 3 89999999988888899999999999998753
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=98.04 E-value=7.4e-06 Score=63.49 Aligned_cols=48 Identities=23% Similarity=0.322 Sum_probs=31.5
Q ss_pred CCCceeeEeeCCCceEEEEEEEcCCC---CCCCCCCcEEEecCCCCCcceee
Q 011833 63 TADELHYVAVPNSDWRLALWRYLPSP---AAPQRNHPLLLLSGIGTNAIGYD 111 (476)
Q Consensus 63 ~~~e~~~v~~~~dG~~L~~~~~~p~~---~~~~~~~~VlllHG~~~~~~~~~ 111 (476)
.+.|+|.|+ |+||+.|.++|+++.. ....++|||+|.||+.+++..|.
T Consensus 10 Y~~E~h~V~-T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 10 YPCEEHEVT-TEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp ---EEEEEE--TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred CCcEEEEEE-eCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 456899998 8999999999997665 12457899999999999999985
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.1e-05 Score=78.70 Aligned_cols=60 Identities=20% Similarity=0.289 Sum_probs=42.5
Q ss_pred hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCC----CcccccEEEEecccccc
Q 011833 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEG----KDSGFASVTTLASSLDY 295 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~----~~~~v~~lvlla~~~~~ 295 (476)
..++..+|+.|.+..+. .+|++++||||+.+.+.++....... ...+|..+++++|-++.
T Consensus 76 ~~~l~~~L~~L~~~~~~--~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 76 GPALARFLRDLARAPGI--KRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred HHHHHHHHHHHHhccCC--ceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 35666677777666444 49999999999999998876543111 12478899999887653
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00025 Score=74.97 Aligned_cols=50 Identities=18% Similarity=0.285 Sum_probs=39.0
Q ss_pred HHHHHHHHhCC--CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 240 VMEYIRTLSKP--KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 240 ~i~~l~~~~~~--~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
++-+|.+.+.. +.++.+++|+||||..++.++.++| +.+..++.+++.+.
T Consensus 273 LlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~P-----d~Fg~v~s~Sgs~w 324 (411)
T PRK10439 273 LLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWP-----ERFGCVLSQSGSFW 324 (411)
T ss_pred HHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCc-----ccccEEEEecccee
Confidence 34555555332 3357899999999999999999998 88999999998753
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.00 E-value=5.9e-06 Score=84.79 Aligned_cols=58 Identities=12% Similarity=0.139 Sum_probs=40.8
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
+.+..+|..|.+..+.+.+++++||||+||.++-.+..... . ..+|..++.|.|....
T Consensus 132 ~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~--~-~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 132 RQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLK--G-GGKIGRITGLDPAGPL 189 (331)
T ss_dssp HHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTT--T----SSEEEEES-B-TT
T ss_pred HHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhcc--C-cceeeEEEecCccccc
Confidence 56777788888666766779999999999999988887754 2 3589999999986543
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.4e-05 Score=95.48 Aligned_cols=104 Identities=14% Similarity=0.160 Sum_probs=74.6
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
.+++++++||++++...| ..+++.|.. ++.|+++|.+|+|.+...
T Consensus 1067 ~~~~l~~lh~~~g~~~~~-----~~l~~~l~~-~~~v~~~~~~g~~~~~~~----------------------------- 1111 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQF-----SVLSRYLDP-QWSIYGIQSPRPDGPMQT----------------------------- 1111 (1296)
T ss_pred CCCCeEEecCCCCchHHH-----HHHHHhcCC-CCcEEEEECCCCCCCCCC-----------------------------
Confidence 357899999999999888 588888854 699999999999865211
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
.+++++++ +++.+.++.+ . ..
T Consensus 1112 -----------------------------------------------------~~~l~~la-~~~~~~i~~~---~--~~ 1132 (1296)
T PRK10252 1112 -----------------------------------------------------ATSLDEVC-EAHLATLLEQ---Q--PH 1132 (1296)
T ss_pred -----------------------------------------------------CCCHHHHH-HHHHHHHHhh---C--CC
Confidence 13444445 4554444432 2 22
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
++++++||||||.+++.+|.+.+ ....++..++++++.
T Consensus 1133 ~p~~l~G~S~Gg~vA~e~A~~l~--~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1133 GPYHLLGYSLGGTLAQGIAARLR--ARGEEVAFLGLLDTW 1170 (1296)
T ss_pred CCEEEEEechhhHHHHHHHHHHH--HcCCceeEEEEecCC
Confidence 48999999999999999988532 112678899988763
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0014 Score=63.76 Aligned_cols=63 Identities=11% Similarity=0.067 Sum_probs=43.9
Q ss_pred CCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHH
Q 011833 399 IGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFL 470 (476)
Q Consensus 399 l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL 470 (476)
+.+-.+-+-+.+|.+|.+||.+..+.+.+.+|..++++-+ ++.-| .|+ ....+.....+.+.+
T Consensus 238 ~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde------dki~H-AFV--~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 238 CEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE------DKIPH-AFV--VKHAQYMANAVFDMI 300 (301)
T ss_pred HHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc------ccCCc-cee--ecccHHHHHHHHHhh
Confidence 4444566789999999999999999999999987555544 68888 333 222355555555543
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00039 Score=67.82 Aligned_cols=71 Identities=25% Similarity=0.317 Sum_probs=52.5
Q ss_pred cCCCCc-ccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 398 HIGKTN-VPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 398 ~l~~i~-vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
.+.++. +|+|+++|.+|.++|......+++...+..+...++ ++.+|.+........++.+..+.+|+.++
T Consensus 226 ~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~-----~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 226 DAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFV-----PGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEe-----cCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 455555 899999999999999999999999888732344444 78889654312222247899999999875
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00015 Score=68.81 Aligned_cols=58 Identities=17% Similarity=0.250 Sum_probs=42.4
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcCCCc--eeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIPEHL--VSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
..|++..||+.|+++|..-.++..+.+.... ++++.+ ++-+|... .+=.+.+..|+++
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y-----~g~~h~~~-------~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPY-----PGLGHSTS-------PQELDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeec-----CCcccccc-------HHHHHHHHHHHHH
Confidence 7899999999999999977666666554332 566665 89999543 3336777788775
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=97.78 E-value=3.8e-05 Score=74.68 Aligned_cols=58 Identities=24% Similarity=0.387 Sum_probs=44.5
Q ss_pred hhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 231 HYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 231 ~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
+++.+++ +.+|.++......+..++|+||||..++.++.++| +.+.+++++++.....
T Consensus 96 ~~l~~el---~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~P-----d~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 96 TFLTEEL---IPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHP-----DLFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHTHH---HHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHST-----TTESEEEEESEESETT
T ss_pred eehhccc---hhHHHHhcccccceeEEeccCCCcHHHHHHHHhCc-----cccccccccCcccccc
Confidence 4444444 56666666544334899999999999999999998 8899999999876543
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00015 Score=77.96 Aligned_cols=162 Identities=20% Similarity=0.166 Sum_probs=97.4
Q ss_pred hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhh
Q 011833 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQ 313 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~ 313 (476)
.+|..|+.+.|.++.-....++.+-|-|=||.+.-.++.++| +.+.++|+--|.++|..-.
T Consensus 481 fdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrP-----elfgA~v~evPllDMlRYh-------------- 541 (648)
T COG1505 481 FDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRP-----ELFGAAVCEVPLLDMLRYH-------------- 541 (648)
T ss_pred hHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccCh-----hhhCceeeccchhhhhhhc--------------
Confidence 378889999998875444468999999999999988888888 7788888877776644311
Q ss_pred hccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcc
Q 011833 314 ALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTF 393 (476)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 393 (476)
.+.. -.+|+.. ++.++ +|+.+..+.. ..| +
T Consensus 542 ------------------~l~a---G~sW~~E-YG~Pd--~P~d~~~l~~----YSP---------------y------- 571 (648)
T COG1505 542 ------------------LLTA---GSSWIAE-YGNPD--DPEDRAFLLA----YSP---------------Y------- 571 (648)
T ss_pred ------------------cccc---chhhHhh-cCCCC--CHHHHHHHHh----cCc---------------h-------
Confidence 0000 0134333 22222 2332221110 000 1
Q ss_pred cccccCC--CCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCc--cchhHHHHHH
Q 011833 394 FYKDHIG--KTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAA--YQVYPCIIEF 469 (476)
Q Consensus 394 ~~~~~l~--~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~--~~v~~~i~~f 469 (476)
+.++ +.=-|+||-.+.+|..|.|.++++++.++.......-.+ +--+.||.+- .+.. .....++..|
T Consensus 572 ---~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~---e~t~gGH~g~---~~~~~~A~~~a~~~af 642 (648)
T COG1505 572 ---HNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLR---EETKGGHGGA---APTAEIARELADLLAF 642 (648)
T ss_pred ---hcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEE---eecCCcccCC---CChHHHHHHHHHHHHH
Confidence 1122 122589999999999999999999998886543222222 1247899443 2222 2345566677
Q ss_pred HHhh
Q 011833 470 LTRH 473 (476)
Q Consensus 470 L~~~ 473 (476)
|.+.
T Consensus 643 l~r~ 646 (648)
T COG1505 643 LLRT 646 (648)
T ss_pred HHHh
Confidence 7764
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0011 Score=61.96 Aligned_cols=53 Identities=13% Similarity=0.048 Sum_probs=37.6
Q ss_pred EEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 406 VLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 406 vLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
.+++..+.|.+.+...+.+.+...- ...+. ++..| .| ..-+...+.|++|++.
T Consensus 127 ~~vllq~gDEvLDyr~a~~~y~~~y----~~~v~-----~GGdH-~f----~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTAEELHPYY----EIVWD-----EEQTH-KF----KNISPHLQRIKAFKTL 179 (180)
T ss_pred EEEEEeCCCcccCHHHHHHHhccCc----eEEEE-----CCCCC-CC----CCHHHHHHHHHHHHhc
Confidence 4899999999999888777665442 13343 56777 32 3347789999999864
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00028 Score=71.28 Aligned_cols=53 Identities=19% Similarity=0.191 Sum_probs=42.0
Q ss_pred cHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 236 DVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 236 Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
-+.+++++..+..+-....|++.|||.||.-+.-+|..|| .|+++|+=++.-+
T Consensus 294 A~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YP------dVkavvLDAtFDD 346 (517)
T KOG1553|consen 294 AADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYP------DVKAVVLDATFDD 346 (517)
T ss_pred HHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCC------CceEEEeecchhh
Confidence 4556788888887766567999999999999988898886 4889988665433
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0002 Score=76.99 Aligned_cols=58 Identities=14% Similarity=0.141 Sum_probs=43.3
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
..|..++++|+++.. +.+.++|.++|+|.||.++..++.... ....++++|++++...
T Consensus 154 ~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~---~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 154 LKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPD---SKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcc---hhHHHHHHhhhcCCcc
Confidence 368889999998864 445679999999999998877776421 1246888888876543
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0001 Score=71.08 Aligned_cols=27 Identities=11% Similarity=0.165 Sum_probs=20.5
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSG 124 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~ 124 (476)
+...||++||+.++...| ..+...+..
T Consensus 3 ~~hLvV~vHGL~G~~~d~-----~~~~~~l~~ 29 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADM-----RYLKNHLEK 29 (217)
T ss_pred CCEEEEEeCCCCCCHHHH-----HHHHHHHHH
Confidence 457899999999998888 455555544
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00046 Score=69.05 Aligned_cols=44 Identities=16% Similarity=0.320 Sum_probs=37.7
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCc
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLS 140 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S 140 (476)
.+-|+|||-||+++++..| ..+.-.||+.||-|.++++|-+-.+
T Consensus 116 ~k~PvvvFSHGLggsRt~Y-----Sa~c~~LAShG~VVaavEHRD~SA~ 159 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTLY-----SAYCTSLASHGFVVAAVEHRDRSAC 159 (399)
T ss_pred CCccEEEEecccccchhhH-----HHHhhhHhhCceEEEEeecccCcce
Confidence 3558899999999999888 5788889999999999999876543
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00019 Score=73.94 Aligned_cols=52 Identities=31% Similarity=0.339 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 238 PAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 238 ~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
.+.++.+....+.. ++.++||||||.++..++...+ ...+|++++.++++-.
T Consensus 114 ~~~V~~~l~~~ga~--~v~LigHS~GG~~~ry~~~~~~---~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 114 FAYVDEVLAKTGAK--KVNLIGHSMGGLDSRYYLGVLG---GANRVASVVTLGTPHH 165 (336)
T ss_pred HHHHHHHHhhcCCC--ceEEEeecccchhhHHHHhhcC---ccceEEEEEEeccCCC
Confidence 33445455555554 8999999999999998887754 2267999999997643
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0021 Score=62.60 Aligned_cols=63 Identities=21% Similarity=0.215 Sum_probs=46.9
Q ss_pred CCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCc--eeEEEecCCCCCCCcccccccccCCccchhHHHHHHH
Q 011833 401 KTNVPVLALAADQDLICPTEAVYETVKLIPEHL--VSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFL 470 (476)
Q Consensus 401 ~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL 470 (476)
...+|-|+++++.|.++|.+.++++.+.....+ +..+.+ .+..|+..+ ...|++.++.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f-----~~S~HV~H~--r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKF-----EDSPHVAHL--RKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecC-----CCCchhhhc--ccCHHHHHHHHHhhC
Confidence 456999999999999999999999888765433 444444 445554434 567889999988874
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00072 Score=72.69 Aligned_cols=69 Identities=17% Similarity=0.248 Sum_probs=49.2
Q ss_pred cCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccc------cCCccchhHHHHHHHH
Q 011833 398 HIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGS------RLAAYQVYPCIIEFLT 471 (476)
Q Consensus 398 ~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~------~~~~~~v~~~i~~fL~ 471 (476)
.+-.++.|+|+|.|.+|..|+++..+++.+++... .+++|+ .+++|---+.. .....+|...|.+|+.
T Consensus 299 ~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~-~elhVI-----~~adhsmaipk~k~esegltqseVd~~i~~aI~ 372 (784)
T KOG3253|consen 299 ALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAE-VELHVI-----GGADHSMAIPKRKVESEGLTQSEVDSAIAQAIK 372 (784)
T ss_pred hhHhcCCceEEEecCCcccCCHHHHHHHHHHhhcc-ceEEEe-----cCCCccccCCccccccccccHHHHHHHHHHHHH
Confidence 45567999999999999999999999999999764 578887 67888311111 0112456666666665
Q ss_pred h
Q 011833 472 R 472 (476)
Q Consensus 472 ~ 472 (476)
+
T Consensus 373 e 373 (784)
T KOG3253|consen 373 E 373 (784)
T ss_pred H
Confidence 4
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.03 Score=59.74 Aligned_cols=62 Identities=11% Similarity=0.175 Sum_probs=46.1
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcCCC------------c-----------eeEEEecCCCCCCCcccccccccCCc
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIPEH------------L-----------VSFKVFGEPRGPHYAHYDLVGSRLAA 459 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~~~------------~-----------~~~~v~~~~~~~~~gH~~~~~~~~~~ 459 (476)
.++||+..|+.|.+||.-..+.+.+.+.-. . .++.. +.++|| ++ ...|
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~-----V~~AGH---mV-p~qP 417 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFAT-----IKAGGH---TA-EYRP 417 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEE-----EcCCCC---CC-CCCH
Confidence 479999999999999999988888776411 0 11122 367999 44 3579
Q ss_pred cchhHHHHHHHHhh
Q 011833 460 YQVYPCIIEFLTRH 473 (476)
Q Consensus 460 ~~v~~~i~~fL~~~ 473 (476)
+..+..+-.|+...
T Consensus 418 ~~al~m~~~Fi~~~ 431 (433)
T PLN03016 418 NETFIMFQRWISGQ 431 (433)
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999754
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0019 Score=68.49 Aligned_cols=58 Identities=14% Similarity=0.160 Sum_probs=44.1
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
..|...+++|+++.. |-+.+.|.|+|+|-|++.++.+++. |.. ...+..+|++++...
T Consensus 158 l~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~A--kGLF~rAi~~Sg~~~ 218 (491)
T COG2272 158 LLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSA--KGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccc--hHHHHHHHHhCCCCC
Confidence 468889999998864 5556789999999999988777654 411 256788888887765
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00083 Score=67.57 Aligned_cols=35 Identities=14% Similarity=0.324 Sum_probs=31.5
Q ss_pred cEeEEEEchHHHHHHHHHhcCCCCCCc-ccccEEEEeccc
Q 011833 254 KLLAVGHSMGGILLYAMLSHCGFEGKD-SGFASVTTLASS 292 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~~a~~~p~~~~~-~~v~~lvlla~~ 292 (476)
-+++||+|+||.++=.++.+|| + +.|+.+|.++++
T Consensus 96 G~naIGfSQGglflRa~ierc~----~~p~V~nlISlggp 131 (306)
T PLN02606 96 GYNIVAESQGNLVARGLIEFCD----NAPPVINYVSLGGP 131 (306)
T ss_pred ceEEEEEcchhHHHHHHHHHCC----CCCCcceEEEecCC
Confidence 4999999999999999999998 4 679999999875
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0019 Score=70.02 Aligned_cols=147 Identities=19% Similarity=0.135 Sum_probs=92.7
Q ss_pred CCceeeEeeCCCceEEEEEEEcCCCC-CCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccc
Q 011833 64 ADELHYVAVPNSDWRLALWRYLPSPA-APQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 64 ~~e~~~v~~~~dG~~L~~~~~~p~~~-~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~ 142 (476)
..+++++. ..||..+-......... -.+++|-+|..|| +-....+.+. +.-...|.+.|+.....|.||-|.
T Consensus 440 ~~~r~~~~-SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYG--ay~isl~p~f-~~srl~lld~G~Vla~a~VRGGGe--- 512 (712)
T KOG2237|consen 440 VVERIEVS-SKDGTKVPMFIVYKKDIKLDGSKPLLLYGYG--AYGISLDPSF-RASRLSLLDRGWVLAYANVRGGGE--- 512 (712)
T ss_pred EEEEEEEe-cCCCCccceEEEEechhhhcCCCceEEEEec--ccceeecccc-ccceeEEEecceEEEEEeeccCcc---
Confidence 45666777 78998888766642221 1345565555555 4443332110 122234557899777789999774
Q ss_pred ccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLI 222 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (476)
++..|-+.++. .+=
T Consensus 513 -------------------~G~~WHk~G~l--------------akK--------------------------------- 526 (712)
T KOG2237|consen 513 -------------------YGEQWHKDGRL--------------AKK--------------------------------- 526 (712)
T ss_pred -------------------cccchhhccch--------------hhh---------------------------------
Confidence 33444444311 100
Q ss_pred cccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 223 VKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 223 ~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
+-+ .+|..+.++||.+..-....++.+.|.|-||+++..+.-.+| ..+.++++-.|..++.
T Consensus 527 ---qN~-----f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rP-----dLF~avia~VpfmDvL 587 (712)
T KOG2237|consen 527 ---QNS-----FDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRP-----DLFGAVIAKVPFMDVL 587 (712)
T ss_pred ---ccc-----HHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCc-----hHhhhhhhcCcceehh
Confidence 111 257778899998875555579999999999999988888887 7788888777766644
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00098 Score=62.76 Aligned_cols=99 Identities=22% Similarity=0.375 Sum_probs=71.9
Q ss_pred CCCHHHHHHHH-HHHHhCCccccCCcccccc---cCCCCc-ccEEEEeeCCCCcCCHHH---HHHHHHhcCCCceeEEEe
Q 011833 368 NIPTKLISQLT-TVFQEGGLCDRSGTFFYKD---HIGKTN-VPVLALAADQDLICPTEA---VYETVKLIPEHLVSFKVF 439 (476)
Q Consensus 368 ~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~---~l~~i~-vPvLii~G~~D~~vp~~~---~~~~~~~l~~~~~~~~v~ 439 (476)
++++..+.+-. .+|++..+.. |.+.+.. .++.|+ +++|-|-|+.|.|+.+.+ +..++..+|...+..++.
T Consensus 96 Dl~AefyL~Ti~~VFq~~~L~~--G~~~~~Gr~Vdp~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~ 173 (202)
T PF06850_consen 96 DLPAEFYLDTIRRVFQEHLLPR--GTWTVRGRPVDPAAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQ 173 (202)
T ss_pred cCcHHHHHHHHHHHHHhCcccC--CceEECCEEcchHHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhccc
Confidence 77777766644 4666555543 2332222 344554 688889999999998855 555666777766666665
Q ss_pred cCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 440 GEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 440 ~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
+++|||+++.+..-.+++++.|.+|+.+|
T Consensus 174 -----~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 174 -----PGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred -----CCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 89999999999888999999999999875
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00096 Score=68.22 Aligned_cols=62 Identities=21% Similarity=0.266 Sum_probs=45.8
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCC---CCCCcccccEEEEeccccccc
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCG---FEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p---~~~~~~~v~~lvlla~~~~~~ 296 (476)
...++..+|.+|.+....+ +|++++||||..+++.++...- ......+|+-+|+-+|-.+..
T Consensus 173 Sr~aLe~~lr~La~~~~~~--~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 173 SRPALERLLRYLATDKPVK--RIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred hHHHHHHHHHHHHhCCCCc--eEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChh
Confidence 4567888899998776554 8999999999999988875432 221346788888888866543
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0051 Score=63.93 Aligned_cols=64 Identities=14% Similarity=0.176 Sum_probs=53.2
Q ss_pred cCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 398 HIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 398 ~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
+..++++|-++|.|..|++..+....-+++.+++. +.+..+ ||++|... ...+...+..|+.+.
T Consensus 257 Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~-K~lr~v-----PN~~H~~~------~~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 257 YRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGE-KYLRYV-----PNAGHSLI------GSDVVQSLRAFYNRI 320 (367)
T ss_pred HHHhcCccEEEEecCCCceeccCchHHHHhhCCCC-eeEEeC-----CCCCcccc------hHHHHHHHHHHHHHH
Confidence 44667999999999999999999999999999974 667776 99999432 277888899998763
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.009 Score=65.33 Aligned_cols=58 Identities=21% Similarity=0.265 Sum_probs=46.0
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~ 297 (476)
.|..++.++|.+..-...+.++++|-|.||++.-..+-..| ..++++|+-.|.++...
T Consensus 509 ~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P-----~lf~~iiA~VPFVDvlt 566 (682)
T COG1770 509 TDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAP-----DLFAGIIAQVPFVDVLT 566 (682)
T ss_pred HHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhCh-----hhhhheeecCCccchhh
Confidence 46667888888775545568999999999999988887776 88999998888776443
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0018 Score=71.64 Aligned_cols=60 Identities=30% Similarity=0.432 Sum_probs=42.1
Q ss_pred ccHHHHHHHHHHHhCC-CCC------cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 235 EDVPAVMEYIRTLSKP-KDG------KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~-~~~------ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
+-+..+|.+|...+.. .+. -+++|||||||++|..++.. | +..+..|.-++++++|-..+
T Consensus 157 EYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl-k-n~~~~sVntIITlssPH~a~ 223 (973)
T KOG3724|consen 157 EYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL-K-NEVQGSVNTIITLSSPHAAP 223 (973)
T ss_pred HHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh-h-hhccchhhhhhhhcCcccCC
Confidence 4566677777776643 122 39999999999999887764 3 22346788899888765443
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0012 Score=60.94 Aligned_cols=38 Identities=29% Similarity=0.366 Sum_probs=28.8
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
.+++++|||+||.++..++.... .....+.+++++.+.
T Consensus 64 ~~~~l~g~s~Gg~~a~~~a~~l~--~~~~~~~~l~~~~~~ 101 (212)
T smart00824 64 RPFVLVGHSSGGLLAHAVAARLE--ARGIPPAAVVLLDTY 101 (212)
T ss_pred CCeEEEEECHHHHHHHHHHHHHH--hCCCCCcEEEEEccC
Confidence 47999999999999988887632 112568888887653
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.022 Score=54.89 Aligned_cols=37 Identities=19% Similarity=0.195 Sum_probs=28.2
Q ss_pred EEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccc
Q 011833 407 LALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLV 453 (476)
Q Consensus 407 Lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~ 453 (476)
.++-|++|.|.|++..+++.+... .+..+ +++|+.+.
T Consensus 169 ~aiIg~~D~IFpp~nQ~~~W~~~~----~~~~~------~~~Hy~F~ 205 (213)
T PF04301_consen 169 KAIIGKKDRIFPPENQKRAWQGRC----TIVEI------DAPHYPFF 205 (213)
T ss_pred EEEEcCCCEEeCHHHHHHHHhCcC----cEEEe------cCCCcCch
Confidence 578999999999999999887532 34443 67898763
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0024 Score=62.83 Aligned_cols=51 Identities=20% Similarity=0.374 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 237 VPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 237 l~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
+..+.+.+.++.... .-+++||.|+||.++-.++..++ ++.|+.+|.++++
T Consensus 77 v~~~ce~v~~m~~ls-qGynivg~SQGglv~Raliq~cd----~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 77 VDVACEKVKQMPELS-QGYNIVGYSQGGLVARALIQFCD----NPPVKNFISLGGP 127 (296)
T ss_pred HHHHHHHHhcchhcc-CceEEEEEccccHHHHHHHHhCC----CCCcceeEeccCC
Confidence 344556665443221 34899999999999999998887 5889999999875
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0018 Score=69.85 Aligned_cols=57 Identities=12% Similarity=0.090 Sum_probs=41.7
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
..|..++++|+++.. |-+.++|.++|||-||..+...+.. |.. ...+.++|+.++..
T Consensus 186 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s-p~~--~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 186 LLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLS-PSS--KGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHG-GGG--TTSBSEEEEES--T
T ss_pred hhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeec-ccc--cccccccccccccc
Confidence 468999999999875 3344689999999999877655544 411 26799999998743
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.00093 Score=70.19 Aligned_cols=56 Identities=20% Similarity=0.301 Sum_probs=44.1
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCC-CcccccEEEEecccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEG-KDSGFASVTTLASSL 293 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~-~~~~v~~lvlla~~~ 293 (476)
..+...|+.+.+..+ .|+++|||||||.++..++...+... +++.|+++|.++++.
T Consensus 104 ~~lk~~ie~~~~~~~---~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 104 TKLKQLIEEAYKKNG---KKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred HHHHHHHHHHHHhcC---CcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 567778887766653 48999999999999999998865321 346799999999875
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0022 Score=65.47 Aligned_cols=64 Identities=20% Similarity=0.339 Sum_probs=49.6
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
|.|++|+.+++++.++........ .++..++||||||.=++.+|.++| ++++.+..+++.+...
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~-~~~~aI~G~SMGG~GAl~lA~~~p-----d~f~~~sS~Sg~~~~s 190 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGT-GDGRAIAGHSMGGYGALKLALKHP-----DRFKSASSFSGILSPS 190 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccc-cCCceeEEEeccchhhhhhhhhCc-----chhceecccccccccc
Confidence 778888989888666644332110 026899999999999999999988 8899999998877655
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0029 Score=67.20 Aligned_cols=63 Identities=14% Similarity=0.200 Sum_probs=45.5
Q ss_pred CCchhhhhccHHHHHHHHHHHhC-CCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSK-PKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~-~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
.|.++.+ +|++.++++++.... .+..|++++|-|+||.++.-+-.+|| +.|.+.++-++++..
T Consensus 87 Lt~~QAL-aD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP-----~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 87 LTSEQAL-ADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYP-----HLFDGAWASSAPVQA 150 (434)
T ss_dssp -SHHHHH-HHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-T-----TT-SEEEEET--CCH
T ss_pred cCHHHHH-HHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCC-----CeeEEEEeccceeee
Confidence 4556655 899999999987653 34468999999999999999999999 778888877766543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.013 Score=57.98 Aligned_cols=57 Identities=21% Similarity=0.374 Sum_probs=43.1
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~ 297 (476)
+.+.+.-.|+ +....+.++-.++|||+||.+++.+...+| ..+...++++|++.+..
T Consensus 120 L~~~lkP~Ie---~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p-----~~F~~y~~~SPSlWw~n 176 (264)
T COG2819 120 LTEQLKPFIE---ARYRTNSERTAIIGHSLGGLFVLFALLTYP-----DCFGRYGLISPSLWWHN 176 (264)
T ss_pred HHHhhHHHHh---cccccCcccceeeeecchhHHHHHHHhcCc-----chhceeeeecchhhhCC
Confidence 4444444444 334444457999999999999999999987 78999999999887665
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0018 Score=64.54 Aligned_cols=35 Identities=29% Similarity=0.569 Sum_probs=28.4
Q ss_pred cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 254 KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
-+++||+|+||.++=.++.+|| +..|+.+|.++++
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~----~~~V~nlISlggp 115 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCN----DPPVHNLISLGGP 115 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-T----SS-EEEEEEES--
T ss_pred ceeeeeeccccHHHHHHHHHCC----CCCceeEEEecCc
Confidence 5999999999999999999998 5789999999875
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.013 Score=56.25 Aligned_cols=55 Identities=25% Similarity=0.297 Sum_probs=40.1
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
+|+.+++++|...... .+++++|||.|+.=.+.++...- ++..|.+.|+.+|+.+
T Consensus 91 edl~~l~~Hi~~~~fS--t~vVL~GhSTGcQdi~yYlTnt~---~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 91 EDLKCLLEHIQLCGFS--TDVVLVGHSTGCQDIMYYLTNTT---KDRKIRAAILQAPVSD 145 (299)
T ss_pred HHHHHHHHHhhccCcc--cceEEEecCccchHHHHHHHhcc---chHHHHHHHHhCccch
Confidence 7999999988665433 38999999999987777764311 2356777888887765
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0084 Score=60.54 Aligned_cols=35 Identities=20% Similarity=0.363 Sum_probs=31.5
Q ss_pred cEeEEEEchHHHHHHHHHhcCCCCCCc-ccccEEEEeccc
Q 011833 254 KLLAVGHSMGGILLYAMLSHCGFEGKD-SGFASVTTLASS 292 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~~a~~~p~~~~~-~~v~~lvlla~~ 292 (476)
-+++||+|+||.++=.++.++| + +.|+.+|.++++
T Consensus 95 G~naIGfSQGGlflRa~ierc~----~~p~V~nlISlggp 130 (314)
T PLN02633 95 GYNIVGRSQGNLVARGLIEFCD----GGPPVYNYISLAGP 130 (314)
T ss_pred cEEEEEEccchHHHHHHHHHCC----CCCCcceEEEecCC
Confidence 4999999999999999999998 4 579999999875
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.015 Score=60.33 Aligned_cols=60 Identities=17% Similarity=0.178 Sum_probs=44.3
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
.++.+..++|.+..+. +.|.++|-|.||.+++.++...--..+..--+++|+++|.....
T Consensus 179 ~qlv~~Y~~Lv~~~G~--~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 179 RQLVATYDYLVESEGN--KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHHHHHHhccCC--CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 5778888888865554 48999999999999988775432111224467999999988765
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.029 Score=58.60 Aligned_cols=57 Identities=18% Similarity=0.148 Sum_probs=43.2
Q ss_pred hhhhhccHHHHHHHHHHHhCCCCC--cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecc
Q 011833 230 DHYLEEDVPAVMEYIRTLSKPKDG--KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLAS 291 (476)
Q Consensus 230 ~~~~~~Dl~a~i~~l~~~~~~~~~--ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~ 291 (476)
.-|.+-|+..++.++.++.....+ +++++|+|.||.++.+++.-.| ..|.+++=-++
T Consensus 159 GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP-----~~~~~~iDns~ 217 (403)
T PF11144_consen 159 GIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAP-----WLFDGVIDNSS 217 (403)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCc-----cceeEEEecCc
Confidence 344455888888888887654444 8999999999999999999887 55666664443
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.035 Score=59.06 Aligned_cols=123 Identities=14% Similarity=0.134 Sum_probs=89.5
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccch
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQS 171 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 171 (476)
..+|..|++-|=+.-...|...+...+..+..+.|-.|+.+++|=+|.|.+-...+
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~s------------------------ 139 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLS------------------------ 139 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCc------------------------
Confidence 34577777777676666786556556777777889999999999999995433211
Q ss_pred hhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCC
Q 011833 172 KSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPK 251 (476)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~ 251 (476)
.+.+ .-.+..+.+ +|++.+|+.+..+.+..
T Consensus 140 ----------------------------------------t~nl---------k~LSs~QAL-aDla~fI~~~n~k~n~~ 169 (514)
T KOG2182|consen 140 ----------------------------------------TSNL---------KYLSSLQAL-ADLAEFIKAMNAKFNFS 169 (514)
T ss_pred ----------------------------------------ccch---------hhhhHHHHH-HHHHHHHHHHHhhcCCC
Confidence 0000 013445555 89999999998888665
Q ss_pred CC-cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 252 DG-KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 252 ~~-ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
++ |.+..|-|+-|.++.-+=..+| +.+.+.|.-++++
T Consensus 170 ~~~~WitFGgSYsGsLsAW~R~~yP-----el~~GsvASSapv 207 (514)
T KOG2182|consen 170 DDSKWITFGGSYSGSLSAWFREKYP-----ELTVGSVASSAPV 207 (514)
T ss_pred CCCCeEEECCCchhHHHHHHHHhCc-----hhheeecccccce
Confidence 54 9999999999999988888998 7777777666554
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.024 Score=48.14 Aligned_cols=61 Identities=16% Similarity=0.190 Sum_probs=47.1
Q ss_pred CcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 402 TNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 402 i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
-..|+|++.++.|+++|.+.++++.+.++++ .+..+ ++.||..+. ....-+.+.+.+||..
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s--~lvt~-----~g~gHg~~~---~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPGS--RLVTV-----DGAGHGVYA---GGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCCc--eEEEE-----eccCcceec---CCChHHHHHHHHHHHc
Confidence 3599999999999999999999999999975 34444 688995542 2224566777788874
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.06 Score=56.22 Aligned_cols=61 Identities=18% Similarity=0.178 Sum_probs=42.9
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcCCCc------------------------eeEEEecCCCCCCCcccccccccCC
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIPEHL------------------------VSFKVFGEPRGPHYAHYDLVGSRLA 458 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~------------------------~~~~v~~~~~~~~~gH~~~~~~~~~ 458 (476)
.++||+.+|+.|.+||.-..+...+.+.-.. .++..+ .++|| ++..+.
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V-----~~AGH---mvP~dq 401 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTV-----RGAGH---MVPQDQ 401 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEE-----TT--S---SHHHHS
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEE-----cCCcc---cChhhC
Confidence 4899999999999999999999888763211 112333 68999 566788
Q ss_pred ccchhHHHHHHHH
Q 011833 459 AYQVYPCIIEFLT 471 (476)
Q Consensus 459 ~~~v~~~i~~fL~ 471 (476)
|+..+..+-.||+
T Consensus 402 P~~a~~m~~~fl~ 414 (415)
T PF00450_consen 402 PEAALQMFRRFLK 414 (415)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999985
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.016 Score=52.33 Aligned_cols=57 Identities=21% Similarity=0.120 Sum_probs=36.6
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
..+...++...+.. +..++.++|||+||.+|..++....-.. ...+..++.++++..
T Consensus 12 ~~i~~~~~~~~~~~--p~~~i~v~GHSlGg~lA~l~a~~~~~~~-~~~~~~~~~fg~p~~ 68 (153)
T cd00741 12 NLVLPLLKSALAQY--PDYKIHVTGHSLGGALAGLAGLDLRGRG-LGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHC--CCCeEEEEEcCHHHHHHHHHHHHHHhcc-CCCceEEEEeCCCcc
Confidence 34444444444332 3358999999999999999887754110 135667888777653
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.017 Score=56.23 Aligned_cols=54 Identities=24% Similarity=0.428 Sum_probs=37.8
Q ss_pred HHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 239 AVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 239 a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
.+++++.+......+++.+.|||.||.+|..++..++-. ...+|..++...+|.
T Consensus 70 ~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~-~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 70 SALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDE-IQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHH-HhhheeEEEEeeCCC
Confidence 445565555433334799999999999999888875411 125788988887764
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.022 Score=62.14 Aligned_cols=57 Identities=16% Similarity=0.264 Sum_probs=41.2
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCC--CC-----C---CcccccEEEEecccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCG--FE-----G---KDSGFASVTTLASSL 293 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p--~~-----~---~~~~v~~lvlla~~~ 293 (476)
..+...|+.+.+..+. +|+++|||||||.+++.++.... .. + .++-|++.|.++++.
T Consensus 197 ~rLK~lIE~ay~~ngg--kKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 197 SRLKSNIELMVATNGG--KKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HHHHHHHHHHHHHcCC--CeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 5788888888766532 48999999999999988775321 00 0 245789999998764
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.07 Score=52.36 Aligned_cols=38 Identities=8% Similarity=0.097 Sum_probs=26.8
Q ss_pred CCcEEEecCC--CCCcceeecCCCCCHHHHHHhCCCcEEEecCC
Q 011833 94 NHPLLLLSGI--GTNAIGYDLSPEYSFARYMSGQGFDTWILEVR 135 (476)
Q Consensus 94 ~~~VlllHG~--~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~r 135 (476)
+.+|-|+-|. ++..... |+.+.+.|+++||.|++.=+.
T Consensus 17 ~gvihFiGGaf~ga~P~it----Yr~lLe~La~~Gy~ViAtPy~ 56 (250)
T PF07082_consen 17 KGVIHFIGGAFVGAAPQIT----YRYLLERLADRGYAVIATPYV 56 (250)
T ss_pred CEEEEEcCcceeccCcHHH----HHHHHHHHHhCCcEEEEEecC
Confidence 4566677665 4443333 268899999999999998763
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.042 Score=48.27 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=26.6
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC 274 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~ 274 (476)
+.+...++.+.+..+ +.++.+.|||+||.+|..++...
T Consensus 48 ~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 48 DQILDALKELVEKYP--DYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhh
Confidence 344444555555544 24899999999999998887654
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.19 Score=49.64 Aligned_cols=61 Identities=16% Similarity=0.206 Sum_probs=46.4
Q ss_pred cEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhcC
Q 011833 405 PVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHDM 475 (476)
Q Consensus 405 PvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~~ 475 (476)
-+.++.+++|..+|...+..+.+.+|+. +...+ ..||..-. .-..+.+-..|.+-|++.+.
T Consensus 308 l~ivv~A~~D~Yipr~gv~~lQ~~WPg~--eVr~~------egGHVsay--l~k~dlfRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 308 LIIVVQAKEDAYIPRTGVRSLQEIWPGC--EVRYL------EGGHVSAY--LFKQDLFRRAIVDGLDRLDK 368 (371)
T ss_pred eEEEEEecCCccccccCcHHHHHhCCCC--EEEEe------ecCceeee--ehhchHHHHHHHHHHHhhhh
Confidence 3688999999999999999999999987 44443 37885433 23346777888899988764
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.093 Score=54.79 Aligned_cols=52 Identities=13% Similarity=0.187 Sum_probs=42.0
Q ss_pred hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEec
Q 011833 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLA 290 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla 290 (476)
..|.+++|.++++..+....+++++|-|+||+++.-+=.+|| +-|.+..+-+
T Consensus 148 LADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYP-----Hiv~GAlAaS 199 (492)
T KOG2183|consen 148 LADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYP-----HIVLGALAAS 199 (492)
T ss_pred HHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcCh-----hhhhhhhhcc
Confidence 379999999999987777789999999999999988888998 4444444433
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.28 Score=47.08 Aligned_cols=41 Identities=20% Similarity=0.333 Sum_probs=33.3
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
..+++|.||.||...+.+..++| .+.+|.++++-.++...+
T Consensus 190 ~sv~vvahsyGG~~t~~l~~~f~---~d~~v~aialTDs~~~~p 230 (297)
T KOG3967|consen 190 ESVFVVAHSYGGSLTLDLVERFP---DDESVFAIALTDSAMGSP 230 (297)
T ss_pred ceEEEEEeccCChhHHHHHHhcC---CccceEEEEeecccccCc
Confidence 37999999999999999999977 346788888877775443
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.096 Score=48.42 Aligned_cols=37 Identities=24% Similarity=0.208 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCC
Q 011833 237 VPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCG 275 (476)
Q Consensus 237 l~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p 275 (476)
+.+-++.+.+..+. ....+||-|+||+.+..++.+++
T Consensus 45 a~~ele~~i~~~~~--~~p~ivGssLGGY~At~l~~~~G 81 (191)
T COG3150 45 ALKELEKAVQELGD--ESPLIVGSSLGGYYATWLGFLCG 81 (191)
T ss_pred HHHHHHHHHHHcCC--CCceEEeecchHHHHHHHHHHhC
Confidence 33344444444432 25999999999999999998876
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.081 Score=51.00 Aligned_cols=37 Identities=24% Similarity=0.322 Sum_probs=25.7
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~ 273 (476)
.++...+..+++.. ++.++.+.|||+||.+|..++..
T Consensus 112 ~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 112 NQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHH
Confidence 34444454444443 33589999999999999888765
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.093 Score=50.33 Aligned_cols=41 Identities=24% Similarity=0.334 Sum_probs=34.5
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC 274 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~ 274 (476)
+..|+.++.++..++.+.+ .+++|+|||+|+.++..++..+
T Consensus 76 ay~DV~~AF~~yL~~~n~G-RPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNNG-RPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hHHHHHHHHHHHHHhcCCC-CCEEEEEeChHHHHHHHHHHHH
Confidence 5579999999888887543 6899999999999999998764
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.13 Score=48.27 Aligned_cols=54 Identities=20% Similarity=0.261 Sum_probs=42.1
Q ss_pred hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
..++..+++-|+... .++.++.++|||+|+.++-.++...+ ..+..+|+++++.
T Consensus 91 a~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~-----~~vddvv~~GSPG 144 (177)
T PF06259_consen 91 APRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGG-----LRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCC-----CCcccEEEECCCC
Confidence 357777888887766 33458999999999999988877633 6788999998874
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=93.08 E-value=0.28 Score=51.21 Aligned_cols=40 Identities=18% Similarity=0.264 Sum_probs=32.0
Q ss_pred hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCC
Q 011833 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCG 275 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p 275 (476)
..|+..+|++...+.+.. ++.++|+|+|+=+.-..--+.|
T Consensus 309 a~Dl~r~i~~y~~~w~~~--~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 309 AADLSRLIRFYARRWGAK--RVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred HHHHHHHHHHHHHhhCcc--eEEEEeecccchhhHHHHHhCC
Confidence 389999999999988775 9999999999977644444433
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.42 E-value=0.2 Score=52.78 Aligned_cols=39 Identities=18% Similarity=0.175 Sum_probs=28.3
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~ 273 (476)
+++...|+.+.+.......+|.+.|||+||.+|+.+|..
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 566666776666654332249999999999999988854
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=92.21 E-value=1.2 Score=47.70 Aligned_cols=67 Identities=10% Similarity=0.130 Sum_probs=46.4
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcCC----CceeE----------EEe----cCCCCCCCcccccccccCCccchhH
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIPE----HLVSF----------KVF----GEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~~----~~~~~----------~v~----~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
.++||+..|+.|.+|+....++..+.+.- ....+ +.+ ....+.++|| ++ ...|+..+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGH---mV-p~qP~~al~ 426 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGH---TA-EYLPEESSI 426 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCC---Cc-CcCHHHHHH
Confidence 47999999999999999888888887641 10001 000 0012367999 44 358999999
Q ss_pred HHHHHHHhh
Q 011833 465 CIIEFLTRH 473 (476)
Q Consensus 465 ~i~~fL~~~ 473 (476)
.+..|+...
T Consensus 427 m~~~fi~~~ 435 (437)
T PLN02209 427 MFQRWISGQ 435 (437)
T ss_pred HHHHHHcCC
Confidence 999999653
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=92.02 E-value=0.22 Score=51.73 Aligned_cols=39 Identities=21% Similarity=0.131 Sum_probs=26.6
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~ 273 (476)
+.+.+.|+.+.+..+....+|.+.|||+||.+|..+|..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 344444555555544322369999999999999988864
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.93 E-value=0.32 Score=51.91 Aligned_cols=55 Identities=18% Similarity=0.233 Sum_probs=31.5
Q ss_pred cHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhc---CCCCCCcccccEEEEeccc
Q 011833 236 DVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSH---CGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 236 Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~---~p~~~~~~~v~~lvlla~~ 292 (476)
.+...++.+.+.. ++.++.+.|||+||.+|..+++. ........++.++++.++|
T Consensus 263 ~I~~~L~~lL~k~--p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqP 320 (475)
T PLN02162 263 TIRQMLRDKLARN--KNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQP 320 (475)
T ss_pred HHHHHHHHHHHhC--CCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCC
Confidence 3444444333332 23489999999999999887652 1111101235566776654
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.56 E-value=1.1 Score=47.91 Aligned_cols=68 Identities=15% Similarity=0.109 Sum_probs=45.2
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcCCCce----eEEE--------------ecCCCCCCCcccccccccCCccchhH
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIPEHLV----SFKV--------------FGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~----~~~v--------------~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
..+++|..|+.|.+||.-..+...+.+.-..+ .+.. +.-..+.++|| ++..+.|+....
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH---~VP~~~p~~al~ 439 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGH---MVPYDKPESALI 439 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcc---cCCCCCcHHHHH
Confidence 38999999999999999888777665431100 0000 00012368999 555677788888
Q ss_pred HHHHHHHhh
Q 011833 465 CIIEFLTRH 473 (476)
Q Consensus 465 ~i~~fL~~~ 473 (476)
.+..||...
T Consensus 440 m~~~fl~g~ 448 (454)
T KOG1282|consen 440 MFQRFLNGQ 448 (454)
T ss_pred HHHHHHcCC
Confidence 899999764
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.33 E-value=0.78 Score=50.09 Aligned_cols=55 Identities=11% Similarity=0.143 Sum_probs=36.8
Q ss_pred ccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 235 EDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
.|...+++|+++.. +-+.++|.++|||.||..+-.+... |.. ...+..+|.++..
T Consensus 174 ~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~S-p~s--~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 174 FDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLS-PHS--RGLFHKAISMSGN 231 (545)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcC-Hhh--HHHHHHHHhhccc
Confidence 58888999998874 3345789999999999987555432 211 1345555555543
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.28 E-value=0.4 Score=51.31 Aligned_cols=55 Identities=20% Similarity=0.222 Sum_probs=32.9
Q ss_pred cHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC---CCCCCcccccEEEEeccc
Q 011833 236 DVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC---GFEGKDSGFASVTTLASS 292 (476)
Q Consensus 236 Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~---p~~~~~~~v~~lvlla~~ 292 (476)
.+...++.+.+.. ++.++.+.|||+||.+|..++... .......++..+.+.++|
T Consensus 269 ~i~~~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~P 326 (479)
T PLN00413 269 TILRHLKEIFDQN--PTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQP 326 (479)
T ss_pred HHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCC
Confidence 4444555554443 234899999999999998887521 100111345566666654
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.19 E-value=0.1 Score=55.33 Aligned_cols=61 Identities=23% Similarity=0.352 Sum_probs=43.8
Q ss_pred hhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCC---CCCcccccEEEEecccc
Q 011833 230 DHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGF---EGKDSGFASVTTLASSL 293 (476)
Q Consensus 230 ~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~---~~~~~~v~~lvlla~~~ 293 (476)
++|. ..+...||..-+..+- +|+++|+|||||.+.+.+...++- .-.++-|++++.++++.
T Consensus 162 d~yl-~kLK~~iE~~~~~~G~--kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 162 DQYL-SKLKKKIETMYKLNGG--KKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred HHHH-HHHHHHHHHHHHHcCC--CceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchh
Confidence 3444 6788888888777663 399999999999999998887662 11234577777776543
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.92 E-value=0.29 Score=51.65 Aligned_cols=38 Identities=18% Similarity=0.158 Sum_probs=25.2
Q ss_pred cHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhc
Q 011833 236 DVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 236 Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~ 273 (476)
++.+.+..+.+.......+|.+.|||+||.+|..+|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 34444444444433222369999999999999988864
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=90.08 E-value=2.3 Score=44.09 Aligned_cols=67 Identities=24% Similarity=0.206 Sum_probs=49.3
Q ss_pred CcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 402 TNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 402 i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
...+.+.+.++.|.++|.+..+++.......++.+..+..-+.+|.+|+ ...|........+|+...
T Consensus 224 ~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~-----r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 224 LPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHF-----RSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred ccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeee-----ccCcHHHHHHHHHHHHhc
Confidence 3567788889999999999999997776655555555433345566663 345788899999999864
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=89.93 E-value=0.39 Score=44.97 Aligned_cols=58 Identities=17% Similarity=0.230 Sum_probs=39.5
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCC-CCCcccccEEEEeccccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGF-EGKDSGFASVTTLASSLD 294 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~-~~~~~~v~~lvlla~~~~ 294 (476)
.++...|+.....- ++.|++++|+|+|+.++..++...++ .....+|.++++++-+..
T Consensus 65 ~~~~~~i~~~~~~C--P~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 65 ANLVRLIEEYAARC--PNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHhC--CCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 45555555544443 34699999999999999988876221 111367999999987764
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=89.67 E-value=0.42 Score=50.44 Aligned_cols=39 Identities=21% Similarity=0.319 Sum_probs=26.5
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~ 273 (476)
+.+.+.|..+.+.+....-+|.+.|||+||.+|.++|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 344444555555543323479999999999999988853
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=89.12 E-value=0.63 Score=48.12 Aligned_cols=46 Identities=17% Similarity=0.211 Sum_probs=33.8
Q ss_pred CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 251 KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 251 ~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
...++.+||||+|+-+.+.++....-.+.-..|..+++++.+....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 4468999999999999988876543112234589999999877543
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.05 E-value=1.1 Score=45.19 Aligned_cols=54 Identities=17% Similarity=0.279 Sum_probs=40.7
Q ss_pred HHHHHHHHHhCC--CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC
Q 011833 239 AVMEYIRTLSKP--KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 239 a~i~~l~~~~~~--~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~ 297 (476)
+++=++++.+.. ..+.-+|+|-|+||.+++..+.++| ..+..++..++.++...
T Consensus 161 eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~P-----e~FG~V~s~Sps~~~~~ 216 (299)
T COG2382 161 ELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHP-----ERFGHVLSQSGSFWWTP 216 (299)
T ss_pred HhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCc-----hhhceeeccCCccccCc
Confidence 445556555432 1235689999999999999999998 88888888888876554
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=88.73 E-value=0.52 Score=50.81 Aligned_cols=38 Identities=18% Similarity=0.243 Sum_probs=25.1
Q ss_pred cHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhc
Q 011833 236 DVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 236 Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~ 273 (476)
++.+.+..+.+.+.....+|.+.|||+||.+|..++..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 34444444444443222379999999999999988764
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=87.87 E-value=0.63 Score=50.34 Aligned_cols=38 Identities=21% Similarity=0.221 Sum_probs=25.9
Q ss_pred ccHHHHHHHHHHHhC----CCCCcEeEEEEchHHHHHHHHHh
Q 011833 235 EDVPAVMEYIRTLSK----PKDGKLLAVGHSMGGILLYAMLS 272 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~----~~~~ki~lvGhS~GG~ia~~~a~ 272 (476)
+++.+.|..+.+.+. -..-+|.+.|||+||.+|.++|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 344455555555442 12247999999999999998874
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=87.67 E-value=0.5 Score=49.76 Aligned_cols=21 Identities=33% Similarity=0.419 Sum_probs=18.3
Q ss_pred CcEeEEEEchHHHHHHHHHhc
Q 011833 253 GKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~ 273 (476)
.+|.+.|||+||.+|++++..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 479999999999999888753
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=87.59 E-value=0.48 Score=51.18 Aligned_cols=21 Identities=33% Similarity=0.404 Sum_probs=18.2
Q ss_pred CcEeEEEEchHHHHHHHHHhc
Q 011833 253 GKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~ 273 (476)
.+|.+.|||+||.+|+.+|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 479999999999999888853
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=87.49 E-value=0.67 Score=50.00 Aligned_cols=35 Identities=26% Similarity=0.440 Sum_probs=25.7
Q ss_pred cHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHh
Q 011833 236 DVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLS 272 (476)
Q Consensus 236 Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~ 272 (476)
.+...++.+.+.. ++.++.+.|||+||.+|..++.
T Consensus 306 ~v~~~lk~ll~~~--p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEH--KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHC--CCCeEEEeccccHHHHHHHHHH
Confidence 4555555555554 3348999999999999988874
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=86.45 E-value=0.83 Score=49.48 Aligned_cols=37 Identities=19% Similarity=0.234 Sum_probs=25.5
Q ss_pred cHHHHHHHHHHHhCC---CCCcEeEEEEchHHHHHHHHHh
Q 011833 236 DVPAVMEYIRTLSKP---KDGKLLAVGHSMGGILLYAMLS 272 (476)
Q Consensus 236 Dl~a~i~~l~~~~~~---~~~ki~lvGhS~GG~ia~~~a~ 272 (476)
.+.+.|..+.+.++. .+-+|.+.|||+||.+|.++|.
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 344445555544432 1348999999999999998874
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=84.98 E-value=1.1 Score=48.55 Aligned_cols=38 Identities=18% Similarity=0.213 Sum_probs=25.3
Q ss_pred cHHHHHHHHHHHhCC---CCCcEeEEEEchHHHHHHHHHhc
Q 011833 236 DVPAVMEYIRTLSKP---KDGKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 236 Dl~a~i~~l~~~~~~---~~~ki~lvGhS~GG~ia~~~a~~ 273 (476)
.+.+.|..+.+.+.. ...+|.+.|||+||.+|.++|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344444545444431 12479999999999999988753
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=84.60 E-value=1.1 Score=38.79 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=20.7
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCccee
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGY 110 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~ 110 (476)
.-+|..++..+..... ....|+||+|||+++-..|
T Consensus 74 ~I~g~~iHFih~rs~~---~~aiPLll~HGWPgSf~Ef 108 (112)
T PF06441_consen 74 EIDGLDIHFIHVRSKR---PNAIPLLLLHGWPGSFLEF 108 (112)
T ss_dssp EETTEEEEEEEE--S----TT-EEEEEE--SS--GGGG
T ss_pred EEeeEEEEEEEeeCCC---CCCeEEEEECCCCccHHhH
Confidence 3489999998876543 2468999999999886444
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=82.95 E-value=1.5 Score=48.15 Aligned_cols=21 Identities=33% Similarity=0.305 Sum_probs=17.8
Q ss_pred CcEeEEEEchHHHHHHHHHhc
Q 011833 253 GKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~ 273 (476)
-++.++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 389999999999999877653
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=81.63 E-value=5.9 Score=42.86 Aligned_cols=56 Identities=13% Similarity=0.123 Sum_probs=43.6
Q ss_pred cHHHHHHHHH-HHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 236 DVPAVMEYIR-TLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 236 Dl~a~i~~l~-~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
++..+-+.|. +.++....+-...|.|.||--++..|.+|| +.+.+++.-+|...+.
T Consensus 97 ~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP-----~dfDGIlAgaPA~~~~ 153 (474)
T PF07519_consen 97 ETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYP-----EDFDGILAGAPAINWT 153 (474)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhCh-----hhcCeEEeCCchHHHH
Confidence 3444444443 345666668899999999999999999999 8899999999887654
|
It also includes several bacterial homologues of unknown function. |
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.61 E-value=2.3 Score=42.61 Aligned_cols=39 Identities=21% Similarity=0.416 Sum_probs=29.5
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCC
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCG 275 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p 275 (476)
.+...++..+++.+ ++.+|.+.|||+||.+|..+-.++.
T Consensus 260 Sa~ldI~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 260 SAALDILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHHHHHhC--CCceEEEeccccchHHHHHhccccC
Confidence 45556666666665 3459999999999999988877754
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=81.61 E-value=2.3 Score=42.61 Aligned_cols=39 Identities=21% Similarity=0.416 Sum_probs=29.5
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCC
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCG 275 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p 275 (476)
.+...++..+++.+ ++.+|.+.|||+||.+|..+-.++.
T Consensus 260 Sa~ldI~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 260 SAALDILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHHHHHhC--CCceEEEeccccchHHHHHhccccC
Confidence 45556666666665 3459999999999999988877754
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* Length = 377 | Back alignment and structure |
|---|
Score = 63.9 bits (155), Expect = 3e-11
Identities = 67/418 (16%), Positives = 124/418 (29%), Gaps = 105/418 (25%)
Query: 77 WRLALWR---YLPSPAAPQRNHPLLLLSGIGTNAIGY-DLSPEYSFARYMSGQGFDTWIL 132
+ L + R + R L G+ +A + P S A ++ G+D W+
Sbjct: 38 YILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLG 97
Query: 133 EVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNE 192
R G T +R + S
Sbjct: 98 NSR--------------------------GNTWARRNLYYS------------------- 112
Query: 193 GEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252
PD+ +F+ + FD + D+PA +++I L K
Sbjct: 113 ---PDSVEFWA-----------------------FSFDEMAKYDLPATIDFI--LKKTGQ 144
Query: 253 GKLLAVGHSMGGILLYAMLS-HCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDP 311
KL VGHS G + + S + + F ++ +A+ + +L+L S
Sbjct: 145 DKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATV--KYTETLINKLMLVPSFL 202
Query: 312 IQALNV-----PVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMH--PELFEKLIFS 364
+ + P FLA + + S F+I D M+ + +
Sbjct: 203 FKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSH 262
Query: 365 NFGNIPTKLISQLTTVFQEGGLC-----------DRSGTFFYKD-HIGKTNVPVLALAAD 412
N + + + + G ++ +VP+
Sbjct: 263 NPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGG 322
Query: 413 QDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFL 470
DL+ V + +P + K+ P Y H D + + A VY I+ +
Sbjct: 323 NDLLADPHDVDLLLSKLPNLIYHRKI------PPYNHLDFIWAMDAPQAVYNEIVSMM 374
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.6 bits (146), Expect = 7e-10
Identities = 66/475 (13%), Positives = 123/475 (25%), Gaps = 156/475 (32%)
Query: 41 HRGVTEKKPSNVVRNKPKRKICTADELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLL 100
+ NV R +P K+ R AL R +L+
Sbjct: 120 YNDNQVFAKYNVSRLQPYLKL----------------RQALLE--------LRPAKNVLI 155
Query: 101 ---SGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANA 157
G G + D+ Y M + F W+
Sbjct: 156 DGVLGSGKTWVALDVCLSYKVQCKMDFKIF--WL-------------------------- 187
Query: 158 KSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAP---QFFDLQERLSTSLED 214
L S ++E + + ++ D + + +Q L L+
Sbjct: 188 ------NLKNC-NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 215 FQKQLDLIVKND-WDFDHYLEEDVPAVMEYI----RTLSKPKDGKLLAVGHSMGGILLYA 269
+ L+V + + + L + ++ L A
Sbjct: 241 KPYENCLLVLLNVQN---------AKAWNAFNLSCKILLTTRFKQVTDF-------LSAA 284
Query: 270 MLSHCGFEGKDSGFA---SVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPL--GT 324
+H + + L LD RP L P + L P
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ-DL---------PREVLT--TNPRRLSI 332
Query: 325 FLAAIHPFASSP---PYVLSW-LKFLISA------PDMMHPELFEKL-IFSNFGNIPTKL 373
+I ++ +V L +I + P ++F++L +F +IPT L
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR-KMFDRLSVFPPSAHIPTIL 391
Query: 374 ISQL------------TTVFQEGGLCDR---SGTFFYKDHIGKTNVPVLALAADQDLICP 418
+S + + L ++ T + L +L
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS---------IYL----ELKVK 438
Query: 419 TEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473
E Y + I +H + P+ + DL+ L Y + H
Sbjct: 439 LENEYALHRSIVDH------YNIPKT--FDSDDLIPPYLDQY-----FYSHIGHH 480
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 9e-07
Identities = 66/481 (13%), Positives = 135/481 (28%), Gaps = 128/481 (26%)
Query: 32 VVPLRALYAHRGVTEKKPSNVV------RNKPKRKICTADELHYVAVPN----------- 74
V L +++ V K + N P+ + +L Y PN
Sbjct: 165 WVALDVCLSYK-VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223
Query: 75 ----SDWRLALWRYLPSPAAPQRNHP--LLLLSGIGTNAI--GYDL-------SPEYSFA 119
+ L R L + + LL+L + ++L +
Sbjct: 224 KLRIHSIQAELRRLLK-----SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVT 278
Query: 120 RYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETV 179
++S L+ L+ ++ L RE + + ++
Sbjct: 279 DFLSAATTTHISLDHHSMTLTP------DEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI 332
Query: 180 MQSSQRLSGLLNEGEDPDAPQFFD--LQERLSTSLEDFQKQLDLIVKNDWDF-DHY---- 232
+ S R + + ++L+T +E L+ ++ +
Sbjct: 333 IAESIR--------DGLATWDNWKHVNCDKLTTIIESSLNVLE-----PAEYRKMFDRLS 379
Query: 233 -LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLA- 290
I P LL+ ++ + ++ V L
Sbjct: 380 VFPPSAH-----I-----PT--ILLS-------LIWFDVIKSDVMV-------VVNKLHK 413
Query: 291 -SSLDYRPSNSLLRL------LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPP----YV 339
S ++ +P S + + L + AL+ ++ PP Y
Sbjct: 414 YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYF 473
Query: 340 LSWLKFLISAPDMMH-PELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTF-FYKD 397
S + + + LF +F +F + K+ T G + + FYK
Sbjct: 474 YSHIGHHLKNIEHPERMTLFRM-VFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKP 532
Query: 398 HIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRL 457
+ IC + YE +L+ ++ F E + DL+ R+
Sbjct: 533 Y-----------------ICDNDPKYE--RLVNA-ILDFLPKIEENLICSKYTDLL--RI 570
Query: 458 A 458
A
Sbjct: 571 A 571
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 56.5 bits (135), Expect = 6e-09
Identities = 33/256 (12%), Positives = 72/256 (28%), Gaps = 30/256 (11%)
Query: 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGI--LLYAMLSHCGFEGKDSGF 283
+W + ++ D+ V+ +I+ S + ++ G S GGI L Y+ L +
Sbjct: 120 NWGWSTWIS-DIKEVVSFIKRDSGQE--RIYLAGESFGGIAALNYSSLYW------KNDI 170
Query: 284 ASVTTLASSLDYRPSNSLLRLLLPLS------DPIQALNVPVIPLGTFLAAIHPFASSPP 337
+ L S I + P + P
Sbjct: 171 KGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPS 230
Query: 338 YVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKD 397
+ D ++ + + + L + K
Sbjct: 231 PDPKYKSISDFLMDSLYVTGSAN-PYDYPYSKKEDMFPILASFDPYWPYRLSLERD-LKF 288
Query: 398 HIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRL 457
VP +A +++ I K++P + + G Y H D+
Sbjct: 289 DYEGILVPTIAFVSERFGIQIF-----DSKILPSNSEIILLKG------YGHLDVYTGEN 337
Query: 458 AAYQVYPCIIEFLTRH 473
+ V ++++L++
Sbjct: 338 SEKDVNSVVLKWLSQQ 353
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 36/222 (16%), Positives = 59/222 (26%), Gaps = 52/222 (23%)
Query: 258 VGHSMGG-ILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALN 316
+GHS+ I A + +T + S + D
Sbjct: 103 IGHSVSSIIAGIASTHVGD------RISDITMICPSP---------CFMNFPPD-----Y 142
Query: 317 VPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMM----HPELFEKLIFSNFGNIPTK 372
V I+ + W +L AP +M EL +L S P
Sbjct: 143 VGGFERDDLEELINLMDKNYI---GWANYL--APLVMGASHSSELIGELSGSFCTTDPIV 197
Query: 373 LISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPE- 431
+ F D Y+ + + P L + +D + E + IP
Sbjct: 198 AKTFAKATFFS----D------YRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIPNS 247
Query: 432 HLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473
L H H A + P +I F+ +
Sbjct: 248 QLELI-----QAEGHCLHMT------DAGLITPLLIHFIQNN 278
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 34/254 (13%), Positives = 66/254 (25%), Gaps = 73/254 (28%)
Query: 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGG-ILLYAMLSHCGFEGKDSG 282
+ Y++ +V + K+ L +G+SMGG I+L L
Sbjct: 58 QCPSTVYGYID-NVANFITNSEVTKHQKNITL--IGYSMGGAIVLGVALKK--------- 105
Query: 283 FASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFA-SSPPYVLS 341
++ + L+ F ++
Sbjct: 106 --------------------------LPNVRKV--------VSLSGGARFDKLDKDFMEK 131
Query: 342 WLKFLISAPDMMH-----PELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYK 396
+ ++ + F P +I+ L
Sbjct: 132 IYHNQLDNNYLLECIGGIDNPLSEKYFETLEKDPDIMINDLIACK----------LIDLV 181
Query: 397 DHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSR 456
D++ ++PV A+ A +L+ E K + K+F G H+
Sbjct: 182 DNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVEN--SELKIF--ETGKHFLLVV----- 232
Query: 457 LAAYQVYPCIIEFL 470
A V I F+
Sbjct: 233 -NAKGVAEEIKNFI 245
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 4e-04
Identities = 35/243 (14%), Positives = 66/243 (27%), Gaps = 65/243 (26%)
Query: 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293
++ VM L K+ G S+GG+ SL
Sbjct: 67 DDWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVF-------------------------SL 101
Query: 294 DYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPY--VLSWLKFLISAPD 351
VP+ + T A ++ + Y VL + +
Sbjct: 102 KL------------------GYTVPIEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREG 143
Query: 352 MMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAA 411
++ +++ F P K + L + + +DH+ P + A
Sbjct: 144 KSEEQIEQEME--KFKQTPMKTLKALQELIAD-----------VRDHLDLIYAPTFVVQA 190
Query: 412 DQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLT 471
D + ++ I + K + + H D Q++ I FL
Sbjct: 191 RHDEMINPDSANIIYNEIESPVKQIKWY--EQSGHVITLD-----QEKDQLHEDIYAFLE 243
Query: 472 RHD 474
D
Sbjct: 244 SLD 246
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 8e-04
Identities = 31/181 (17%), Positives = 51/181 (28%), Gaps = 23/181 (12%)
Query: 258 VGHSMGG-ILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALN 316
VG SMG I L H +S+T L ++ + ++ + L
Sbjct: 99 VGLSMGATITQVIALDHHDR------LSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLP 152
Query: 317 VPVIPLGTFLAAIHPFASSPP-----YVLSWLKFLISAPDMMHPELFEKL--IFSNFGNI 369
P P LA ++ A V W + E + G +
Sbjct: 153 GPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGV 212
Query: 370 PTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLI 429
+ + + + + VP L + A+ D I P LI
Sbjct: 213 LAEPYAHYSLTLPPPSRAAE---------LREVTVPTLVIQAEHDPIAPAPHGKHLAGLI 263
Query: 430 P 430
P
Sbjct: 264 P 264
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 476 | |||
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.97 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.96 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.96 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.95 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.95 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 99.95 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.95 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 99.95 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.95 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.95 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.95 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.95 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.95 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.94 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.94 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.94 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.94 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.94 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.94 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.94 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.94 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.94 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.94 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.94 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.94 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.94 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.94 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.94 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.94 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.94 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.94 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.93 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 99.93 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.93 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 99.93 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.93 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.93 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.93 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.93 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.93 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.93 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.93 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.93 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.93 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.92 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.92 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.92 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.92 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.92 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.92 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.92 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.92 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.92 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.92 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.92 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.92 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.92 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.92 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.92 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.92 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.91 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.91 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.91 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.91 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.91 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.91 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.91 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.91 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.91 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.91 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.91 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.91 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.9 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.9 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.9 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.9 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.9 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.9 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.9 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.9 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.9 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.9 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.9 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.89 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.89 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.89 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.82 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.89 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.89 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.89 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.88 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.88 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.88 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.88 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.88 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.87 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.87 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.87 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.87 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.87 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.87 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.87 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.86 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.86 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.86 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.86 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.85 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.85 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.85 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.85 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.85 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.84 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.84 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.84 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.84 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.84 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.84 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.84 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.84 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.83 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.83 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.83 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.83 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.82 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.82 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.82 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.82 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.82 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.82 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.81 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.81 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.81 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.81 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.81 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.8 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.8 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.8 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.79 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.79 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.79 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.79 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.79 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.78 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.78 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.78 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.78 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.78 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.78 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.78 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.77 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.77 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.77 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.77 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.76 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.76 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.76 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.76 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.75 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.75 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.75 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.75 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.75 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.74 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.74 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.74 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.74 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.74 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.73 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.73 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.73 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.72 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.71 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.71 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.7 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.7 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.7 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.7 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.69 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.69 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.69 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.69 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.68 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.67 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.67 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.67 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.66 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.65 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.65 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.64 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.64 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.63 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.63 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.62 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.61 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.6 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.57 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.54 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.51 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.5 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.49 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.48 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.48 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.46 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.45 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.45 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.43 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.43 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.43 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.41 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.39 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.38 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.37 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.37 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.37 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.36 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.34 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.26 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.26 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.21 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.2 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.18 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.16 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.15 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.11 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.08 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 98.74 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.66 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.65 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 98.65 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 98.61 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.52 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.48 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.47 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 98.46 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.05 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.04 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.0 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 97.98 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 97.92 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 97.87 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 97.8 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 97.65 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 97.56 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 97.55 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 97.39 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.35 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 97.34 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.31 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 97.14 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 96.85 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 96.74 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 96.67 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 96.57 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 96.28 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 95.81 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 95.63 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 95.57 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 94.95 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 94.62 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 93.73 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 93.12 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 92.84 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 92.41 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 90.7 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 89.58 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 88.46 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 87.56 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 87.38 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 85.71 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 85.01 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 84.16 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 83.95 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 83.79 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 83.65 |
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-29 Score=250.92 Aligned_cols=325 Identities=17% Similarity=0.214 Sum_probs=213.6
Q ss_pred CCceeeEeeCCCceEEEEEEEcCCCCC---CCCCCcEEEecCCCCCcceeec-CCCCCHHHHHHhCCCcEEEecCCCCCC
Q 011833 64 ADELHYVAVPNSDWRLALWRYLPSPAA---PQRNHPLLLLSGIGTNAIGYDL-SPEYSFARYMSGQGFDTWILEVRGAGL 139 (476)
Q Consensus 64 ~~e~~~v~~~~dG~~L~~~~~~p~~~~---~~~~~~VlllHG~~~~~~~~~~-~~~~~l~~~L~~~Gy~V~~~D~rG~G~ 139 (476)
+.+.+.+. +.||..|.++++.|.... .+.+|+|||+||++++...|.. .+...+++.|+++||+|+++|+||||.
T Consensus 26 ~~~~~~~~-~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~ 104 (377)
T 1k8q_A 26 PAEEYEVV-TEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTW 104 (377)
T ss_dssp CCEEEEEE-CTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTT
T ss_pred CceEEEeE-cCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCCCC
Confidence 34666777 789999999999765421 1357999999999999988852 234577889999999999999999999
Q ss_pred cccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhh
Q 011833 140 SAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQL 219 (476)
Q Consensus 140 S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (476)
|....... +..+
T Consensus 105 S~~~~~~~------------------------------------------------~~~~-------------------- 116 (377)
T 1k8q_A 105 ARRNLYYS------------------------------------------------PDSV-------------------- 116 (377)
T ss_dssp SCEESSSC------------------------------------------------TTST--------------------
T ss_pred CCCCCCCC------------------------------------------------CCcc--------------------
Confidence 97642100 0000
Q ss_pred hcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcc---cccEEEEeccccccc
Q 011833 220 DLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDS---GFASVTTLASSLDYR 296 (476)
Q Consensus 220 ~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~---~v~~lvlla~~~~~~ 296 (476)
..|.|++++++.+|+.++++++.+..+.+ +++++||||||.+++.++.++| . +|+++|++++.....
T Consensus 117 ---~~~~~~~~~~~~~D~~~~i~~~~~~~~~~--~~~lvG~S~Gg~ia~~~a~~~p-----~~~~~v~~lvl~~~~~~~~ 186 (377)
T 1k8q_A 117 ---EFWAFSFDEMAKYDLPATIDFILKKTGQD--KLHYVGHSQGTTIGFIAFSTNP-----KLAKRIKTFYALAPVATVK 186 (377)
T ss_dssp ---TTTCCCHHHHHHTHHHHHHHHHHHHHCCS--CEEEEEETHHHHHHHHHHHHCH-----HHHTTEEEEEEESCCSCCS
T ss_pred ---cccCccHHHHHhhhHHHHHHHHHHhcCcC--ceEEEEechhhHHHHHHHhcCc-----hhhhhhhEEEEeCCchhcc
Confidence 02357888888559999999998887654 8999999999999999999887 5 799999999876543
Q ss_pred CChhhHHHhhcCcch--hhhcc-CCcCChHHHHHhhccCCCCc----hHHHHHHHHhhc-CCCCCCHHHHHHHhhhccCC
Q 011833 297 PSNSLLRLLLPLSDP--IQALN-VPVIPLGTFLAAIHPFASSP----PYVLSWLKFLIS-APDMMHPELFEKLIFSNFGN 368 (476)
Q Consensus 297 ~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 368 (476)
......+.+...... ...+. ...++...+.+.+...++.. ......+..... .....+.+.+..+....+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (377)
T 1k8q_A 187 YTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAG 266 (377)
T ss_dssp SCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTCCCC
T ss_pred cchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHHhccCCCC
Confidence 322111111111000 00000 01122222222221111111 111111111111 12234556666666555555
Q ss_pred CCHHHHHHHHHHHHhCCccccCC-cc-----------cccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeE
Q 011833 369 IPTKLISQLTTVFQEGGLCDRSG-TF-----------FYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSF 436 (476)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~g-~~-----------~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~ 436 (476)
.....+.+|.+.+..+.+..++- .. .....+.++++|+|+|+|++|.++|++.++++.+.+++.. ++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~-~~ 345 (377)
T 1k8q_A 267 TSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLI-YH 345 (377)
T ss_dssp EEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTTEE-EE
T ss_pred ccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHhCcCcc-cE
Confidence 55667777877776665543321 00 0122488899999999999999999999999999998752 36
Q ss_pred EEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 437 KVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 437 ~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
+++ +++||..++.+.+.++++++.|.+||+++
T Consensus 346 ~~~-----~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 377 (377)
T 1k8q_A 346 RKI-----PPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp EEE-----TTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred Eec-----CCCCceEEEecCCcHHHHHHHHHHHhccC
Confidence 666 89999877666688899999999999874
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-30 Score=251.44 Aligned_cols=233 Identities=15% Similarity=0.181 Sum_probs=159.5
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccch
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQS 171 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 171 (476)
+.++.|||+||++++...| ..+++.|+++||+|+++|+||||.|.....
T Consensus 49 G~~~~VlllHG~~~s~~~~-----~~la~~La~~Gy~Via~Dl~GhG~S~~~~~-------------------------- 97 (281)
T 4fbl_A 49 GSRIGVLVSHGFTGSPQSM-----RFLAEGFARAGYTVATPRLTGHGTTPAEMA-------------------------- 97 (281)
T ss_dssp CSSEEEEEECCTTCCGGGG-----HHHHHHHHHTTCEEEECCCTTSSSCHHHHH--------------------------
T ss_pred CCCceEEEECCCCCCHHHH-----HHHHHHHHHCCCEEEEECCCCCCCCCcccc--------------------------
Confidence 3456799999999999889 689999999999999999999999854221
Q ss_pred hhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCC
Q 011833 172 KSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPK 251 (476)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~ 251 (476)
.+++++++ +|+.++++++.+..
T Consensus 98 ------------------------------------------------------~~~~~~~~-~d~~~~~~~l~~~~--- 119 (281)
T 4fbl_A 98 ------------------------------------------------------ASTASDWT-ADIVAAMRWLEERC--- 119 (281)
T ss_dssp ------------------------------------------------------TCCHHHHH-HHHHHHHHHHHHHC---
T ss_pred ------------------------------------------------------CCCHHHHH-HHHHHHHHHHHhCC---
Confidence 24566666 79999999997652
Q ss_pred CCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhcc
Q 011833 252 DGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHP 331 (476)
Q Consensus 252 ~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (476)
++++++||||||.+++.++.++| ++|+++|++++.............+.+.... ..+
T Consensus 120 -~~v~lvG~S~GG~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~ 176 (281)
T 4fbl_A 120 -DVLFMTGLSMGGALTVWAAGQFP-----ERFAGIMPINAALRMESPDLAALAFNPDAPA-----------------ELP 176 (281)
T ss_dssp -SEEEEEEETHHHHHHHHHHHHST-----TTCSEEEEESCCSCCCCHHHHHHHTCTTCCS-----------------EEE
T ss_pred -CeEEEEEECcchHHHHHHHHhCc-----hhhhhhhcccchhcccchhhHHHHHhHhhHH-----------------hhh
Confidence 38999999999999999999988 8899999999976554321111111000000 000
Q ss_pred CCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEee
Q 011833 332 FASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAA 411 (476)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G 411 (476)
... ..+..+....+. ....+...+.++..... .....+.+|++|+|+|+|
T Consensus 177 ~~~----------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-----------~~~~~l~~i~~P~Lii~G 226 (281)
T 4fbl_A 177 GIG----------------SDIKAEGVKELA---YPVTPVPAIKHLITIGA-----------VAEMLLPRVKCPALIIQS 226 (281)
T ss_dssp CCC----------------CCCSSTTCCCCC---CSEEEGGGHHHHHHHHH-----------HHHHHGGGCCSCEEEEEE
T ss_pred cch----------------hhhhhHHHHHhh---hccCchHHHHHHHHhhh-----------hccccccccCCCEEEEEe
Confidence 000 000000000000 00111111222211110 011357789999999999
Q ss_pred CCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 412 DQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 412 ~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
++|.++|++.++.+++.+++.+++++++ +++||..++ ...++++++.|++||++|
T Consensus 227 ~~D~~v~~~~~~~l~~~l~~~~~~l~~~-----~~~gH~~~~--e~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 227 REDHVVPPHNGELIYNGIGSTEKELLWL-----ENSYHVATL--DNDKELILERSLAFIRKH 281 (281)
T ss_dssp SSCSSSCTHHHHHHHHHCCCSSEEEEEE-----SSCCSCGGG--STTHHHHHHHHHHHHHTC
T ss_pred CCCCCcCHHHHHHHHHhCCCCCcEEEEE-----CCCCCcCcc--ccCHHHHHHHHHHHHHhC
Confidence 9999999999999999998877888888 899995432 345788999999999987
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-27 Score=232.86 Aligned_cols=259 Identities=14% Similarity=0.139 Sum_probs=168.2
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccC
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
.++. +.||.++++..+.+. .+|+|||+||++++...| ..++..|++ +|+|+++|+||||.|++...
T Consensus 7 ~~~~-~~~g~~l~y~~~G~~-----~~p~lvl~hG~~~~~~~w-----~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~-- 72 (266)
T 3om8_A 7 SFLA-TSDGASLAYRLDGAA-----EKPLLALSNSIGTTLHMW-----DAQLPALTR-HFRVLRYDARGHGASSVPPG-- 72 (266)
T ss_dssp EEEE-CTTSCEEEEEEESCT-----TSCEEEEECCTTCCGGGG-----GGGHHHHHT-TCEEEEECCTTSTTSCCCCS--
T ss_pred eEEe-ccCCcEEEEEecCCC-----CCCEEEEeCCCccCHHHH-----HHHHHHhhc-CcEEEEEcCCCCCCCCCCCC--
Confidence 3444 679999999887432 368999999999999999 588888986 79999999999999975332
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
.|
T Consensus 73 ------------------------------------------------------------------------------~~ 74 (266)
T 3om8_A 73 ------------------------------------------------------------------------------PY 74 (266)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ------------------------------------------------------------------------------CC
Confidence 36
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLP 307 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~ 307 (476)
++++++ +|+.++++.+ +. +++++|||||||.+++.+|.++| ++|+++|++++.............+..
T Consensus 75 ~~~~~a-~dl~~~l~~l----~~--~~~~lvGhS~Gg~va~~~A~~~P-----~rv~~lvl~~~~~~~~~~~~~~~~~~~ 142 (266)
T 3om8_A 75 TLARLG-EDVLELLDAL----EV--RRAHFLGLSLGGIVGQWLALHAP-----QRIERLVLANTSAWLGPAAQWDERIAA 142 (266)
T ss_dssp CHHHHH-HHHHHHHHHT----TC--SCEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCSBCCCSHHHHHHHHH
T ss_pred CHHHHH-HHHHHHHHHh----CC--CceEEEEEChHHHHHHHHHHhCh-----HhhheeeEecCcccCCchhHHHHHHHH
Confidence 777777 7888888766 33 38999999999999999999998 899999999876543322111111100
Q ss_pred CcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCcc
Q 011833 308 LSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLC 387 (476)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (476)
... ...+ ...... ....|+...... .+++..+.+.... .......+......+.
T Consensus 143 ~~~------~~~~--~~~~~~---------~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----- 196 (266)
T 3om8_A 143 VLQ------AEDM--SETAAG---------FLGNWFPPALLE---RAEPVVERFRAML-MATNRHGLAGSFAAVR----- 196 (266)
T ss_dssp HHH------CSSS--HHHHHH---------HHHHHSCHHHHH---SCCHHHHHHHHHH-HTSCHHHHHHHHHHHH-----
T ss_pred HHc------cccH--HHHHHH---------HHHHhcChhhhh---cChHHHHHHHHHH-HhCCHHHHHHHHHHhh-----
Confidence 000 0000 000000 000111000000 0111111111100 0111111111111111
Q ss_pred ccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHH
Q 011833 388 DRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCII 467 (476)
Q Consensus 388 ~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~ 467 (476)
..++.+.+.++++|+|+|+|++|.++|++.++.+.+.+|+. +++++ + +||+. ..|.|+++.+.|.
T Consensus 197 ----~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~l~~~ip~a--~~~~i-----~-~gH~~---~~e~p~~~~~~i~ 261 (266)
T 3om8_A 197 ----DTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIAGA--RLVTL-----P-AVHLS---NVEFPQAFEGAVL 261 (266)
T ss_dssp ----TCBCTTTGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTC--EEEEE-----S-CCSCH---HHHCHHHHHHHHH
T ss_pred ----ccchhhHhcCCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC--EEEEe-----C-CCCCc---cccCHHHHHHHHH
Confidence 12334578899999999999999999999999999999986 67776 6 78944 4788999999999
Q ss_pred HHHH
Q 011833 468 EFLT 471 (476)
Q Consensus 468 ~fL~ 471 (476)
+||+
T Consensus 262 ~Fl~ 265 (266)
T 3om8_A 262 SFLG 265 (266)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9996
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.95 E-value=7.2e-27 Score=224.62 Aligned_cols=262 Identities=20% Similarity=0.282 Sum_probs=158.1
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.||.++++..+. .+++|||+||++++...| ..++..|+++||+|+++|+||||.|+++..
T Consensus 5 ~~~g~~l~y~~~G-------~g~~vvllHG~~~~~~~w-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~------- 65 (271)
T 3ia2_A 5 AKDGTQIYFKDWG-------SGKPVLFSHGWLLDADMW-----EYQMEYLSSRGYRTIAFDRRGFGRSDQPWT------- 65 (271)
T ss_dssp CTTSCEEEEEEES-------SSSEEEEECCTTCCGGGG-----HHHHHHHHTTTCEEEEECCTTSTTSCCCSS-------
T ss_pred cCCCCEEEEEccC-------CCCeEEEECCCCCcHHHH-----HHHHHHHHhCCceEEEecCCCCccCCCCCC-------
Confidence 6799999988773 257899999999999999 578899999999999999999999965321
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.++++++
T Consensus 66 -------------------------------------------------------------------------~~~~~~~ 72 (271)
T 3ia2_A 66 -------------------------------------------------------------------------GNDYDTF 72 (271)
T ss_dssp -------------------------------------------------------------------------CCSHHHH
T ss_pred -------------------------------------------------------------------------CCCHHHH
Confidence 2456666
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchh
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPI 312 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~ 312 (476)
+ +|+.++++.+ +. ++++++||||||.+++.+++.++ ..+|+++|++++........... +
T Consensus 73 a-~d~~~~l~~l----~~--~~~~lvGhS~GG~~~~~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~~----~----- 132 (271)
T 3ia2_A 73 A-DDIAQLIEHL----DL--KEVTLVGFSMGGGDVARYIARHG----SARVAGLVLLGAVTPLFGQKPDY----P----- 132 (271)
T ss_dssp H-HHHHHHHHHH----TC--CSEEEEEETTHHHHHHHHHHHHC----STTEEEEEEESCCCSBCBCBTTB----T-----
T ss_pred H-HHHHHHHHHh----CC--CCceEEEEcccHHHHHHHHHHhC----CcccceEEEEccCCccccCCCCC----c-----
Confidence 6 7888888766 22 48999999999987777666552 27899999998643221100000 0
Q ss_pred hhccCCcCChHHHHHhhcc-CCCC-chHHHHHHHHhhc--CCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccc
Q 011833 313 QALNVPVIPLGTFLAAIHP-FASS-PPYVLSWLKFLIS--APDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCD 388 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (476)
...+.. .+..+.. .... ..++..+...... ................... ............+..
T Consensus 133 -----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----- 200 (271)
T 3ia2_A 133 -----QGVPLD-VFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALL-ASLKATVDCVTAFAE----- 200 (271)
T ss_dssp -----TSBCHH-HHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHH-SCHHHHHHHHHHHHH-----
T ss_pred -----ccccHH-HHHHHHHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhh-ccHHHHHHHHHHhhc-----
Confidence 000000 0000000 0000 0000000000000 0111122221111110000 011111111111111
Q ss_pred cCCcccccccCCCCcccEEEEeeCCCCcCCHHHH-HHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHH
Q 011833 389 RSGTFFYKDHIGKTNVPVLALAADQDLICPTEAV-YETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCII 467 (476)
Q Consensus 389 ~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~-~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~ 467 (476)
.++...+.++++|+|+|+|++|.++|++.. +.+.+.+++. +++++ +++||... .+.++++.+.|.
T Consensus 201 ----~~~~~~l~~i~~P~Lvi~G~~D~~~p~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~e~p~~~~~~i~ 266 (271)
T 3ia2_A 201 ----TDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGA--ELKVY-----KDAPHGFA---VTHAQQLNEDLL 266 (271)
T ss_dssp ----CBCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTC--EEEEE-----TTCCTTHH---HHTHHHHHHHHH
T ss_pred ----cCCcccccCCCCCEEEEEeCCCCcCChHHHHHHHHHhCCCc--eEEEE-----cCCCCccc---ccCHHHHHHHHH
Confidence 122346788999999999999999999884 5556667765 77777 89999543 678999999999
Q ss_pred HHHHh
Q 011833 468 EFLTR 472 (476)
Q Consensus 468 ~fL~~ 472 (476)
+||++
T Consensus 267 ~Fl~~ 271 (271)
T 3ia2_A 267 AFLKR 271 (271)
T ss_dssp HHHTC
T ss_pred HHhhC
Confidence 99964
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=221.95 Aligned_cols=270 Identities=17% Similarity=0.187 Sum_probs=175.8
Q ss_pred eEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCc
Q 011833 69 YVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGE 148 (476)
Q Consensus 69 ~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~ 148 (476)
++. +.||.++.++.+.|.. ..+|+||++||++++...| ..+++.|+++||+|+++|+||+|.|.....
T Consensus 21 ~~~-~~~g~~l~~~~~~~~~---~~~~~vv~~hG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--- 88 (303)
T 3pe6_A 21 HLV-NADGQYLFCRYWAPTG---TPKALIFVSHGAGEHSGRY-----EELARMLMGLDLLVFAHDHVGHGQSEGERM--- 88 (303)
T ss_dssp EEE-CTTSCEEEEEEECCSS---CCSEEEEEECCTTCCGGGG-----HHHHHHHHHTTEEEEEECCTTSTTSCSSTT---
T ss_pred eEe-cCCCeEEEEEEeccCC---CCCeEEEEECCCCchhhHH-----HHHHHHHHhCCCcEEEeCCCCCCCCCCCCC---
Confidence 344 6799999999997653 2468899999999999999 589999999999999999999999965321
Q ss_pred cccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCC
Q 011833 149 DSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWD 228 (476)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (476)
..++
T Consensus 89 ----------------------------------------------------------------------------~~~~ 92 (303)
T 3pe6_A 89 ----------------------------------------------------------------------------VVSD 92 (303)
T ss_dssp ----------------------------------------------------------------------------CCSS
T ss_pred ----------------------------------------------------------------------------CCCC
Confidence 0234
Q ss_pred chhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhh-HHHhhc
Q 011833 229 FDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSL-LRLLLP 307 (476)
Q Consensus 229 ~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~-~~~~~~ 307 (476)
+++++ +|+.++++++....+. ++++++||||||.+++.++.++| .+|+++|++++.......... .....
T Consensus 93 ~~~~~-~d~~~~l~~l~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~- 163 (303)
T 3pe6_A 93 FHVFV-RDVLQHVDSMQKDYPG--LPVFLLGHSMGGAIAILTAAERP-----GHFAGMVLISPLVLANPESATTFKVLA- 163 (303)
T ss_dssp THHHH-HHHHHHHHHHHHHSTT--CCEEEEEETHHHHHHHHHHHHST-----TTCSEEEEESCSSSBCHHHHHHHHHHH-
T ss_pred HHHHH-HHHHHHHHHHhhccCC--ceEEEEEeCHHHHHHHHHHHhCc-----ccccEEEEECccccCchhccHHHHHHH-
Confidence 55555 8999999999887543 48999999999999999999987 789999999987654332110 00000
Q ss_pred CcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccC---CCCHHHHHHHHHHHHhC
Q 011833 308 LSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFG---NIPTKLISQLTTVFQEG 384 (476)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 384 (476)
...+....+..........+ ...+......+...... ..............
T Consensus 164 ---------------~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 217 (303)
T 3pe6_A 164 ---------------AKVLNSVLPNLSSGPIDSSV--------LSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAV--- 217 (303)
T ss_dssp ---------------HHHHHTTCCSCCCCCCCGGG--------TCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHH---
T ss_pred ---------------HHHHHHhcccccCCccchhh--------hhcchhHHHHhccCccccccchhhhhHHHHHHHH---
Confidence 00111111111000000000 00112222222111110 11111111111100
Q ss_pred CccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhH
Q 011833 385 GLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 385 ~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
..+.+.+.++++|+|+|+|++|.++|.+.++.+.+.++..+++++++ +++||..+....+...++..
T Consensus 218 --------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~gH~~~~~~p~~~~~~~~ 284 (303)
T 3pe6_A 218 --------SRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIY-----EGAYHVLHKELPEVTNSVFH 284 (303)
T ss_dssp --------HHHHHHGGGCCSCEEEEEETTCSSBCHHHHHHHHHHCCCSSEEEEEE-----TTCCSCGGGSCHHHHHHHHH
T ss_pred --------HHHHHHhhcCCCCEEEEeeCCCCCCChHHHHHHHHhcccCCceEEEe-----CCCccceeccchHHHHHHHH
Confidence 11123577889999999999999999999999999998655688887 89999655322222346777
Q ss_pred HHHHHHHhhc
Q 011833 465 CIIEFLTRHD 474 (476)
Q Consensus 465 ~i~~fL~~~~ 474 (476)
.+++||+++.
T Consensus 285 ~~~~~l~~~~ 294 (303)
T 3pe6_A 285 EINMWVSQRT 294 (303)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHhccC
Confidence 8999998763
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.7e-27 Score=228.07 Aligned_cols=261 Identities=18% Similarity=0.207 Sum_probs=163.8
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.||.++++..+. .++||||+||++++...| ..+++.|+++||+|+++|+||||.|++...
T Consensus 9 ~~~g~~l~y~~~g-------~g~pvvllHG~~~~~~~~-----~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~------- 69 (277)
T 1brt_A 9 NSTSIDLYYEDHG-------TGQPVVLIHGFPLSGHSW-----ERQSAALLDAGYRVITYDRRGFGQSSQPTT------- 69 (277)
T ss_dssp TTEEEEEEEEEEC-------SSSEEEEECCTTCCGGGG-----HHHHHHHHHTTCEEEEECCTTSTTSCCCSS-------
T ss_pred cCCCcEEEEEEcC-------CCCeEEEECCCCCcHHHH-----HHHHHHHhhCCCEEEEeCCCCCCCCCCCCC-------
Confidence 4588888887762 246799999999999999 588999999999999999999999965321
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.|+++++
T Consensus 70 -------------------------------------------------------------------------~~~~~~~ 76 (277)
T 1brt_A 70 -------------------------------------------------------------------------GYDYDTF 76 (277)
T ss_dssp -------------------------------------------------------------------------CCSHHHH
T ss_pred -------------------------------------------------------------------------CccHHHH
Confidence 3667777
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcc-cccEEEEecccccccCChhhHHHhhcCcch
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDS-GFASVTTLASSLDYRPSNSLLRLLLPLSDP 311 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~-~v~~lvlla~~~~~~~~~~~~~~~~~~~~~ 311 (476)
+ +|+.++++.+ +. +++++|||||||.+++.+|.++| . +|+++|++++.......... .+
T Consensus 77 a-~dl~~~l~~l----~~--~~~~lvGhS~Gg~va~~~a~~~p-----~~~v~~lvl~~~~~~~~~~~~~--------~~ 136 (277)
T 1brt_A 77 A-ADLNTVLETL----DL--QDAVLVGFSTGTGEVARYVSSYG-----TARIAKVAFLASLEPFLLKTDD--------NP 136 (277)
T ss_dssp H-HHHHHHHHHH----TC--CSEEEEEEGGGHHHHHHHHHHHC-----STTEEEEEEESCCCSCCBCBTT--------BT
T ss_pred H-HHHHHHHHHh----CC--CceEEEEECccHHHHHHHHHHcC-----cceEEEEEEecCcCcccccccc--------Cc
Confidence 7 7888888876 22 38999999999999999999988 6 89999999874321110000 00
Q ss_pred hhhccCCcCChHHHHHhhccCC-CC-chHHHHHHHHhhc----CCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC
Q 011833 312 IQALNVPVIPLGTFLAAIHPFA-SS-PPYVLSWLKFLIS----APDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG 385 (476)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (476)
. ...+. ..+..+.... .. ..+...+....+. ......++.++.+..... ..... .+...
T Consensus 137 ~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~----- 201 (277)
T 1brt_A 137 D-----GAAPQ-EFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAA-SGGFF---AAAAA----- 201 (277)
T ss_dssp T-----CSBCH-HHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHH-HSCHH---HHHHG-----
T ss_pred c-----ccccH-HHHHHHHHHHhcCchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHh-ccchH---HHHHH-----
Confidence 0 00000 0000000000 00 0000011111110 011122232222211100 00000 00000
Q ss_pred ccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHH-HHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhH
Q 011833 386 LCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAV-YETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 386 ~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~-~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
+... ..+..+.+.++++|+|+|+|++|.++|++.. +.+.+.+++. +++++ +++||..+ .+.|+++.+
T Consensus 202 ~~~~--~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~~~~ 269 (277)
T 1brt_A 202 PTTW--YTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSA--EYVEV-----EGAPHGLL---WTHAEEVNT 269 (277)
T ss_dssp GGGT--TCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCTTS--EEEEE-----TTCCTTHH---HHTHHHHHH
T ss_pred HHHH--hccchhhcccCCCCeEEEecCCCccCChHHHHHHHHHHCCCC--cEEEe-----CCCCcchh---hhCHHHHHH
Confidence 0000 1223346788999999999999999999988 9999999875 67777 89999654 577899999
Q ss_pred HHHHHHHh
Q 011833 465 CIIEFLTR 472 (476)
Q Consensus 465 ~i~~fL~~ 472 (476)
.|.+||++
T Consensus 270 ~i~~fl~~ 277 (277)
T 1brt_A 270 ALLAFLAK 277 (277)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 99999964
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-26 Score=228.72 Aligned_cols=269 Identities=17% Similarity=0.180 Sum_probs=177.2
Q ss_pred eEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCc
Q 011833 69 YVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGE 148 (476)
Q Consensus 69 ~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~ 148 (476)
++. +.||.+|.++.+.|.. ..+|+|||+||++++...| ..+++.|+++||.|+++|+||+|.|.....
T Consensus 39 ~~~-~~dg~~l~~~~~~p~~---~~~p~vv~~HG~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~--- 106 (342)
T 3hju_A 39 HLV-NADGQYLFCRYWKPTG---TPKALIFVSHGAGEHSGRY-----EELARMLMGLDLLVFAHDHVGHGQSEGERM--- 106 (342)
T ss_dssp EEE-CTTSCEEEEEEECCSS---CCSEEEEEECCTTCCGGGG-----HHHHHHHHTTTEEEEEECCTTSTTSCSSTT---
T ss_pred eEE-ccCCeEEEEEEeCCCC---CCCcEEEEECCCCcccchH-----HHHHHHHHhCCCeEEEEcCCCCcCCCCcCC---
Confidence 444 6799999999997763 2468899999999999999 589999999999999999999999965321
Q ss_pred cccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCC
Q 011833 149 DSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWD 228 (476)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (476)
..++
T Consensus 107 ----------------------------------------------------------------------------~~~~ 110 (342)
T 3hju_A 107 ----------------------------------------------------------------------------VVSD 110 (342)
T ss_dssp ----------------------------------------------------------------------------CCSC
T ss_pred ----------------------------------------------------------------------------CcCc
Confidence 1245
Q ss_pred chhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh-hHHHhhc
Q 011833 229 FDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS-LLRLLLP 307 (476)
Q Consensus 229 ~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~-~~~~~~~ 307 (476)
+++++ +|+.++++++....+. .+++++||||||.+++.++.++| .+|+++|++++......... ....+.
T Consensus 111 ~~~~~-~d~~~~l~~l~~~~~~--~~v~l~G~S~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~- 181 (342)
T 3hju_A 111 FHVFV-RDVLQHVDSMQKDYPG--LPVFLLGHSMGGAIAILTAAERP-----GHFAGMVLISPLVLANPESATTFKVLA- 181 (342)
T ss_dssp THHHH-HHHHHHHHHHHHHSTT--CCEEEEEETHHHHHHHHHHHHST-----TTCSEEEEESCCCSCCTTTTSHHHHHH-
T ss_pred HHHHH-HHHHHHHHHHHHhCCC--CcEEEEEeChHHHHHHHHHHhCc-----cccceEEEECcccccchhhhhHHHHHH-
Confidence 55656 8999999999887543 48999999999999999999987 78999999998766543321 111110
Q ss_pred CcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccC---CCCHHHHHHHHHHHHhC
Q 011833 308 LSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFG---NIPTKLISQLTTVFQEG 384 (476)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 384 (476)
..++..+.+.......... ....+.+.+..+...... .........+....
T Consensus 182 ---------------~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 235 (342)
T 3hju_A 182 ---------------AKVLNLVLPNLSLGPIDSS--------VLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAV--- 235 (342)
T ss_dssp ---------------HHHHHHHCTTCBCCCCCGG--------GSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHH---
T ss_pred ---------------HHHHHHhccccccCccccc--------ccccchHHHHHHhcCcccccccccHHHHHHHHHHH---
Confidence 0111111111110000000 000112222222211111 11111111111100
Q ss_pred CccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhH
Q 011833 385 GLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 385 ~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
..+.+.+.++++|+|+|+|++|.++|++.++++.+.+++.+++++++ +++||..+....+...+++.
T Consensus 236 --------~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~gH~~~~~~~~~~~~~~~ 302 (342)
T 3hju_A 236 --------SRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIY-----EGAYHVLHKELPEVTNSVFH 302 (342)
T ss_dssp --------HHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEE-----TTCCSCGGGSCHHHHHHHHH
T ss_pred --------HHHHHHHHhCCcCEEEEEeCCCcccChHHHHHHHHHcCCCCceEEEE-----CCCCchhhcCChHHHHHHHH
Confidence 11223577899999999999999999999999999998655688887 89999655322222346777
Q ss_pred HHHHHHHhh
Q 011833 465 CIIEFLTRH 473 (476)
Q Consensus 465 ~i~~fL~~~ 473 (476)
.+++||+++
T Consensus 303 ~~~~~l~~~ 311 (342)
T 3hju_A 303 EINMWVSQR 311 (342)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhcc
Confidence 899999875
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-26 Score=226.42 Aligned_cols=264 Identities=13% Similarity=0.162 Sum_probs=163.0
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcc---eeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAI---GYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~---~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~ 143 (476)
..++.+ +|.++++..+. .+++|||+||++.+.. .| ..++..| +++|+|+++|+||||.|+..
T Consensus 7 ~~~~~~--~g~~l~y~~~G-------~g~~vvllHG~~~~~~~~~~w-----~~~~~~L-~~~~~vi~~Dl~G~G~S~~~ 71 (282)
T 1iup_A 7 GKSILA--AGVLTNYHDVG-------EGQPVILIHGSGPGVSAYANW-----RLTIPAL-SKFYRVIAPDMVGFGFTDRP 71 (282)
T ss_dssp CEEEEE--TTEEEEEEEEC-------CSSEEEEECCCCTTCCHHHHH-----TTTHHHH-TTTSEEEEECCTTSTTSCCC
T ss_pred cceEEE--CCEEEEEEecC-------CCCeEEEECCCCCCccHHHHH-----HHHHHhh-ccCCEEEEECCCCCCCCCCC
Confidence 455654 89999887752 2578999999986654 67 4667777 56899999999999999653
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
..
T Consensus 72 ~~------------------------------------------------------------------------------ 73 (282)
T 1iup_A 72 EN------------------------------------------------------------------------------ 73 (282)
T ss_dssp TT------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 21
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHH
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLR 303 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~ 303 (476)
..|++++++ +|+.++++.+ +. +++++|||||||.+++.+|.++| ++|+++|++++...........+
T Consensus 74 -~~~~~~~~a-~dl~~~l~~l----~~--~~~~lvGhS~GG~ia~~~A~~~P-----~~v~~lvl~~~~~~~~~~~~~~~ 140 (282)
T 1iup_A 74 -YNYSKDSWV-DHIIGIMDAL----EI--EKAHIVGNAFGGGLAIATALRYS-----ERVDRMVLMGAAGTRFDVTEGLN 140 (282)
T ss_dssp -CCCCHHHHH-HHHHHHHHHT----TC--CSEEEEEETHHHHHHHHHHHHSG-----GGEEEEEEESCCCSCCCCCHHHH
T ss_pred -CCCCHHHHH-HHHHHHHHHh----CC--CceEEEEECHhHHHHHHHHHHCh-----HHHHHHHeeCCccCCCCCCHHHH
Confidence 125667766 7887777754 33 38999999999999999999998 89999999998653211111111
Q ss_pred HhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHh
Q 011833 304 LLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQE 383 (476)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (476)
.+... .+.. ..+..++...........++..+....... .+ .....+..++..
T Consensus 141 ~~~~~-----------~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~ 193 (282)
T 1iup_A 141 AVWGY-----------TPSI-------------ENMRNLLDIFAYDRSLVTDELARLRYEASI--QP-GFQESFSSMFPE 193 (282)
T ss_dssp HHHTC-----------CSCH-------------HHHHHHHHHHCSSGGGCCHHHHHHHHHHHT--ST-THHHHHHHHSCS
T ss_pred HHhcC-----------CCcH-------------HHHHHHHHHhhcCcccCCHHHHHHHHhhcc--Ch-HHHHHHHHHHhc
Confidence 11000 0000 000011111111111112222222111000 00 001111111100
Q ss_pred CCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchh
Q 011833 384 GGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVY 463 (476)
Q Consensus 384 ~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~ 463 (476)
......+......+.+.++++|+|+|+|++|.++|++.++++.+.+++. +++++ +++||+.. .+.|+++.
T Consensus 194 ~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~~~ 263 (282)
T 1iup_A 194 PRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRA--QLHVF-----GRCGHWTQ---IEQTDRFN 263 (282)
T ss_dssp STHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTE--EEEEE-----SSCCSCHH---HHSHHHHH
T ss_pred cccccccccccchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHhCCCC--eEEEE-----CCCCCCcc---ccCHHHHH
Confidence 0000000000001467889999999999999999999999999999875 67777 89999544 67899999
Q ss_pred HHHHHHHHhh
Q 011833 464 PCIIEFLTRH 473 (476)
Q Consensus 464 ~~i~~fL~~~ 473 (476)
+.|.+||++.
T Consensus 264 ~~i~~fl~~~ 273 (282)
T 1iup_A 264 RLVVEFFNEA 273 (282)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHhcC
Confidence 9999999874
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-27 Score=226.02 Aligned_cols=241 Identities=19% Similarity=0.233 Sum_probs=163.9
Q ss_pred eCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCC--cceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcc
Q 011833 72 VPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTN--AIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGED 149 (476)
Q Consensus 72 ~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~--~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~ 149 (476)
++.||.+|.++.+.|... .+.+|+|||+||++++ ...| ..+++.|+++||+|+++|+||||.|.....
T Consensus 6 ~~~~g~~l~~~~~~p~~~-~~~~p~vvl~HG~~~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~---- 75 (251)
T 2wtm_A 6 IDCDGIKLNAYLDMPKNN-PEKCPLCIIIHGFTGHSEERHI-----VAVQETLNEIGVATLRADMYGHGKSDGKFE---- 75 (251)
T ss_dssp EEETTEEEEEEEECCTTC-CSSEEEEEEECCTTCCTTSHHH-----HHHHHHHHHTTCEEEEECCTTSTTSSSCGG----
T ss_pred EecCCcEEEEEEEccCCC-CCCCCEEEEEcCCCcccccccH-----HHHHHHHHHCCCEEEEecCCCCCCCCCccc----
Confidence 345999999988877542 2346889999999999 7778 578999999999999999999999865221
Q ss_pred ccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCc
Q 011833 150 SMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDF 229 (476)
Q Consensus 150 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (476)
++++
T Consensus 76 ----------------------------------------------------------------------------~~~~ 79 (251)
T 2wtm_A 76 ----------------------------------------------------------------------------DHTL 79 (251)
T ss_dssp ----------------------------------------------------------------------------GCCH
T ss_pred ----------------------------------------------------------------------------cCCH
Confidence 2455
Q ss_pred hhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCc
Q 011833 230 DHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLS 309 (476)
Q Consensus 230 ~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~ 309 (476)
++++ +|+.++++++.+..+. ++++++||||||.+++.++.++| .+|+++|+++|....... ......
T Consensus 80 ~~~~-~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~--~~~~~~--- 146 (251)
T 2wtm_A 80 FKWL-TNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMER-----DIIKALIPLSPAAMIPEI--ARTGEL--- 146 (251)
T ss_dssp HHHH-HHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTT-----TTEEEEEEESCCTTHHHH--HHHTEE---
T ss_pred HHHH-HHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCc-----ccceEEEEECcHHHhHHH--Hhhhhh---
Confidence 5555 7999999998664333 38999999999999999999987 789999999886432110 000000
Q ss_pred chhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCcccc
Q 011833 310 DPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDR 389 (476)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (476)
.. ..+.....+..+..+ ... .... .+.....
T Consensus 147 -----~~-----------~~~~~~~~~~~~~~~----------~~~------------~~~~----~~~~~~~------- 177 (251)
T 2wtm_A 147 -----LG-----------LKFDPENIPDELDAW----------DGR------------KLKG----NYVRVAQ------- 177 (251)
T ss_dssp -----TT-----------EECBTTBCCSEEEET----------TTE------------EEET----HHHHHHT-------
T ss_pred -----cc-----------ccCCchhcchHHhhh----------hcc------------ccch----HHHHHHH-------
Confidence 00 000000000000000 000 0000 0000000
Q ss_pred CCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHH
Q 011833 390 SGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEF 469 (476)
Q Consensus 390 ~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~f 469 (476)
..+..+.+.++++|+|+|+|++|.++|++.++++.+.+++ .+++++ +++||. . .+.++++++.|.+|
T Consensus 178 --~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~--~~~~~~-----~~~gH~---~-~~~~~~~~~~i~~f 244 (251)
T 2wtm_A 178 --TIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYKN--CKLVTI-----PGDTHC---Y-DHHLELVTEAVKEF 244 (251)
T ss_dssp --TCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHSSS--EEEEEE-----TTCCTT---C-TTTHHHHHHHHHHH
T ss_pred --ccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhCCC--cEEEEE-----CCCCcc---c-chhHHHHHHHHHHH
Confidence 0111234567899999999999999999999999999975 477777 899994 3 67789999999999
Q ss_pred HHhh
Q 011833 470 LTRH 473 (476)
Q Consensus 470 L~~~ 473 (476)
|+++
T Consensus 245 l~~~ 248 (251)
T 2wtm_A 245 MLEQ 248 (251)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9875
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=225.44 Aligned_cols=262 Identities=17% Similarity=0.190 Sum_probs=161.2
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.+|.++++.... .+++|||+||++++...| ..++..|+++||+|+++|+||||.|+++..
T Consensus 13 ~~~g~~l~y~~~G-------~g~~vvllHG~~~~~~~w-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~------- 73 (281)
T 3fob_A 13 NQAPIEIYYEDHG-------TGKPVVLIHGWPLSGRSW-----EYQVPALVEAGYRVITYDRRGFGKSSQPWE------- 73 (281)
T ss_dssp TTEEEEEEEEEES-------SSEEEEEECCTTCCGGGG-----TTTHHHHHHTTEEEEEECCTTSTTSCCCSS-------
T ss_pred CCCceEEEEEECC-------CCCeEEEECCCCCcHHHH-----HHHHHHHHhCCCEEEEeCCCCCCCCCCCcc-------
Confidence 5688888887652 357899999999999999 688899999999999999999999965321
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.|+++++
T Consensus 74 -------------------------------------------------------------------------~~~~~~~ 80 (281)
T 3fob_A 74 -------------------------------------------------------------------------GYEYDTF 80 (281)
T ss_dssp -------------------------------------------------------------------------CCSHHHH
T ss_pred -------------------------------------------------------------------------ccCHHHH
Confidence 3566676
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchh
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPI 312 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~ 312 (476)
+ +|+.++++.+ +. +++++|||||||.+++.+++.++ ..+|+++|++++.......... .+.
T Consensus 81 a-~dl~~ll~~l----~~--~~~~lvGhS~GG~i~~~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~--------~~~ 141 (281)
T 3fob_A 81 T-SDLHQLLEQL----EL--QNVTLVGFSMGGGEVARYISTYG----TDRIEKVVFAGAVPPYLYKSED--------HPE 141 (281)
T ss_dssp H-HHHHHHHHHT----TC--CSEEEEEETTHHHHHHHHHHHHC----STTEEEEEEESCCCSCCBCCSS--------STT
T ss_pred H-HHHHHHHHHc----CC--CcEEEEEECccHHHHHHHHHHcc----ccceeEEEEecCCCcchhcccc--------ccc
Confidence 6 7888777765 33 38999999999998887776652 2889999999864321100000 000
Q ss_pred hhccCCcCChHHHHHhhccCC-C-CchHHHHHHHHhhcC---CCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCcc
Q 011833 313 QALNVPVIPLGTFLAAIHPFA-S-SPPYVLSWLKFLISA---PDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLC 387 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (476)
.......+..+.... . ...++..+....+.. .....++......... ..............+..
T Consensus 142 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---- 210 (281)
T 3fob_A 142 ------GALDDATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIA-AGASPKGTLDCITAFSK---- 210 (281)
T ss_dssp ------CSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHH-HTSCHHHHHHHHHHHHH----
T ss_pred ------cccchhHHHHHHHHhhhhHHHHHHHHHHHhcccccccccchHHHHHHhhhhh-cccChHHHHHHHHHccc----
Confidence 000000000000000 0 000111111111111 1112222221111100 11122222222222211
Q ss_pred ccCCcccccccCCCCcccEEEEeeCCCCcCCHHHH-HHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHH
Q 011833 388 DRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAV-YETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCI 466 (476)
Q Consensus 388 ~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~-~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i 466 (476)
.++.+.+.++++|||+|+|++|.++|++.. +.+.+.+++. +++++ +++||.. ..+.|+++.+.|
T Consensus 211 -----~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~p~~--~~~~i-----~~~gH~~---~~e~p~~~~~~i 275 (281)
T 3fob_A 211 -----TDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNS--KVALI-----KGGPHGL---NATHAKEFNEAL 275 (281)
T ss_dssp -----CCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTC--EEEEE-----TTCCTTH---HHHTHHHHHHHH
T ss_pred -----cchhhhhhhcCCCEEEEecCCCCCcCHHHHHHHHHHhCCCc--eEEEe-----CCCCCch---hhhhHHHHHHHH
Confidence 122346789999999999999999999875 6677889876 67777 8999954 478899999999
Q ss_pred HHHHH
Q 011833 467 IEFLT 471 (476)
Q Consensus 467 ~~fL~ 471 (476)
.+||+
T Consensus 276 ~~Fl~ 280 (281)
T 3fob_A 276 LLFLK 280 (281)
T ss_dssp HHHHC
T ss_pred HHHhh
Confidence 99996
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-27 Score=234.19 Aligned_cols=280 Identities=12% Similarity=0.042 Sum_probs=168.1
Q ss_pred eeeEeeCCCc----eEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccc
Q 011833 67 LHYVAVPNSD----WRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 67 ~~~v~~~~dG----~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~ 142 (476)
..++.+ +| .++++....+.. .+++|||+||+++++..| ..++..|++.||+|+++|+||||.|++
T Consensus 22 ~~~~~~--~g~~~g~~l~y~~~G~~~----~g~~vvllHG~~~~~~~w-----~~~~~~L~~~g~rvia~Dl~G~G~S~~ 90 (310)
T 1b6g_A 22 PNYLDD--LPGYPGLRAHYLDEGNSD----AEDVFLCLHGEPTWSYLY-----RKMIPVFAESGARVIAPDFFGFGKSDK 90 (310)
T ss_dssp CEEEES--CTTCTTCEEEEEEEECTT----CSCEEEECCCTTCCGGGG-----TTTHHHHHHTTCEEEEECCTTSTTSCE
T ss_pred ceEEEe--cCCccceEEEEEEeCCCC----CCCEEEEECCCCCchhhH-----HHHHHHHHhCCCeEEEeCCCCCCCCCC
Confidence 456654 66 899888775321 158999999999999999 689999999999999999999999976
Q ss_pred ccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLI 222 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (476)
+..
T Consensus 91 ~~~----------------------------------------------------------------------------- 93 (310)
T 1b6g_A 91 PVD----------------------------------------------------------------------------- 93 (310)
T ss_dssp ESC-----------------------------------------------------------------------------
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 331
Q ss_pred cccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCCh-hh
Q 011833 223 VKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSN-SL 301 (476)
Q Consensus 223 ~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~-~~ 301 (476)
...|++++++ +|+.++++.+ +. +++++|||||||.+++.+|.++| ++|+++|++++........ ..
T Consensus 94 -~~~y~~~~~a-~dl~~ll~~l----~~--~~~~lvGhS~Gg~va~~~A~~~P-----~rv~~Lvl~~~~~~~~~~~~~~ 160 (310)
T 1b6g_A 94 -EEDYTFEFHR-NFLLALIERL----DL--RNITLVVQDWGGFLGLTLPMADP-----SRFKRLIIMNAXLMTDPVTQPA 160 (310)
T ss_dssp -GGGCCHHHHH-HHHHHHHHHH----TC--CSEEEEECTHHHHHHTTSGGGSG-----GGEEEEEEESCCCCCCTTTCTH
T ss_pred -cCCcCHHHHH-HHHHHHHHHc----CC--CCEEEEEcChHHHHHHHHHHhCh-----HhheEEEEeccccccCCccccc
Confidence 0136777777 8888888876 33 38999999999999999999998 8999999999854211100 00
Q ss_pred HHHhhcCcchhhhccCCcCChHHHHHhh--ccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHH
Q 011833 302 LRLLLPLSDPIQALNVPVIPLGTFLAAI--HPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTT 379 (476)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (476)
...+... .. .......... .+.+. .. ..+.. .. ..+.++..+.+...............+..
T Consensus 161 ~~~~~~~-~~--------~~~~~~~~~~~~~~~~~--~~--~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (310)
T 1b6g_A 161 FSAFVTQ-PA--------DGFTAWKYDLVTPSDLR--LD--QFMKR--WA-PTLTEAEASAYAAPFPDTSYQAGVRKFPK 224 (310)
T ss_dssp HHHTTTS-ST--------TTHHHHHHHHHSCSSCC--HH--HHHHH--HS-TTCCHHHHHHHHTTCSSGGGCHHHHHHHH
T ss_pred hhhhhhc-cc--------hHHHHHHHHhccCchhh--hh--hHHhh--cC-CCCCHHHHHHHhcccCCccchHHHHHHHH
Confidence 0000000 00 0000000000 00000 00 00000 00 11223333322211100000011111111
Q ss_pred HHHhCCccccCCcccccccCC-CCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCC
Q 011833 380 VFQEGGLCDRSGTFFYKDHIG-KTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLA 458 (476)
Q Consensus 380 ~~~~~~~~~~~g~~~~~~~l~-~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~ 458 (476)
.+...............+.+. ++++|||+|+|++|.++| +..+.+.+.+++......++ +++||+. .. .
T Consensus 225 ~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~ip~~~~~~i~~-----~~~GH~~---~~-~ 294 (310)
T 1b6g_A 225 MVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLG-PDVMYPMKALINGCPEPLEI-----ADAGHFV---QE-F 294 (310)
T ss_dssp HHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSSS-HHHHHHHHHHSTTCCCCEEE-----TTCCSCG---GG-G
T ss_pred HhcccccchhhhhhhHhhhhhccccCceEEEeccCcchhh-hHHHHHHHhcccccceeeec-----CCcccch---hh-C
Confidence 110000000000001123567 899999999999999999 88999999999875444444 8999944 46 7
Q ss_pred ccchhHHHHHHHHhh
Q 011833 459 AYQVYPCIIEFLTRH 473 (476)
Q Consensus 459 ~~~v~~~i~~fL~~~ 473 (476)
|+++.+.|.+||++.
T Consensus 295 p~~~~~~i~~Fl~~~ 309 (310)
T 1b6g_A 295 GEQVAREALKHFAET 309 (310)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhcc
Confidence 899999999999864
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-26 Score=222.33 Aligned_cols=263 Identities=17% Similarity=0.215 Sum_probs=161.7
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.||.++++..+.+. .+++|||+||++++...| ..+++.|+++||+|+++|+||||.|++...
T Consensus 6 ~~~g~~l~y~~~g~~-----~~~~vvllHG~~~~~~~w-----~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~------- 68 (276)
T 1zoi_A 6 TKDGVQIFYKDWGPR-----DAPVIHFHHGWPLSADDW-----DAQLLFFLAHGYRVVAHDRRGHGRSSQVWD------- 68 (276)
T ss_dssp CTTSCEEEEEEESCT-----TSCEEEEECCTTCCGGGG-----HHHHHHHHHTTCEEEEECCTTSTTSCCCSS-------
T ss_pred CCCCcEEEEEecCCC-----CCCeEEEECCCCcchhHH-----HHHHHHHHhCCCEEEEecCCCCCCCCCCCC-------
Confidence 579999998887432 257899999999999999 588999999999999999999999965221
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.|+++++
T Consensus 69 -------------------------------------------------------------------------~~~~~~~ 75 (276)
T 1zoi_A 69 -------------------------------------------------------------------------GHDMDHY 75 (276)
T ss_dssp -------------------------------------------------------------------------CCSHHHH
T ss_pred -------------------------------------------------------------------------CCCHHHH
Confidence 3567777
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC-CCCCCcccccEEEEecccccccCChhhHHHhhcCcch
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC-GFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDP 311 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~-p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~ 311 (476)
+ +|+.++++.+ +. +++++|||||||.+++.+++.+ | ++|+++|++++.......... .+
T Consensus 76 ~-~d~~~~l~~l----~~--~~~~lvGhS~Gg~ia~~~a~~~~p-----~~v~~lvl~~~~~~~~~~~~~--------~~ 135 (276)
T 1zoi_A 76 A-DDVAAVVAHL----GI--QGAVHVGHSTGGGEVVRYMARHPE-----DKVAKAVLIAAVPPLMVQTPG--------NP 135 (276)
T ss_dssp H-HHHHHHHHHH----TC--TTCEEEEETHHHHHHHHHHHHCTT-----SCCCCEEEESCCCSCCBCCSS--------CT
T ss_pred H-HHHHHHHHHh----CC--CceEEEEECccHHHHHHHHHHhCH-----HheeeeEEecCCCcccccccc--------cc
Confidence 7 7888888876 22 3899999999999999988776 6 889999999874321100000 00
Q ss_pred hhhccCCcCChHHHHHhhccCC-CCc-hHHHHHHH-HhhcC---CCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC
Q 011833 312 IQALNVPVIPLGTFLAAIHPFA-SSP-PYVLSWLK-FLISA---PDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG 385 (476)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (476)
...+. ..+..+.... ... .+...+.. ..... .....++..+.+....... ...........+..
T Consensus 136 ------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-- 205 (276)
T 1zoi_A 136 ------GGLPK-SVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIG-SAKAHYDGIVAFSQ-- 205 (276)
T ss_dssp ------TSBCH-HHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHS-CHHHHHHHHHHHHS--
T ss_pred ------ccccH-HHHHHHHHHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhh-hHHHHHHHHHHhcc--
Confidence 00000 0000000000 000 00001100 00000 0112223332222111000 11111111111111
Q ss_pred ccccCCcccccccCCCCcccEEEEeeCCCCcCCHH-HHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhH
Q 011833 386 LCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTE-AVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 386 ~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~-~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
.+..+.+.++++|+|+|+|++|.++|++ ..+.+.+.+++. +++++ +++||..+ .+.|+++.+
T Consensus 206 -------~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~~~~ 268 (276)
T 1zoi_A 206 -------TDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNG--ALKTY-----KGYPHGMP---TTHADVINA 268 (276)
T ss_dssp -------CCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTE--EEEEE-----TTCCTTHH---HHTHHHHHH
T ss_pred -------cchhhhccccCCCEEEEEcCCCcccChHHHHHHHHhhCCCc--eEEEc-----CCCCCchh---hhCHHHHHH
Confidence 1223457789999999999999999988 456677778764 77777 89999544 577899999
Q ss_pred HHHHHHHh
Q 011833 465 CIIEFLTR 472 (476)
Q Consensus 465 ~i~~fL~~ 472 (476)
.|.+||++
T Consensus 269 ~i~~fl~~ 276 (276)
T 1zoi_A 269 DLLAFIRS 276 (276)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhcC
Confidence 99999963
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=224.20 Aligned_cols=257 Identities=14% Similarity=0.141 Sum_probs=163.8
Q ss_pred CCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcccccc
Q 011833 74 NSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMIT 153 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~ 153 (476)
.+|.+++++.+.+.. ..+|+|||+||++++...| ..++..|++ +|+|+++|+||||.|++...
T Consensus 9 ~~g~~l~y~~~g~~~---~~~~~vvllHG~~~~~~~~-----~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~-------- 71 (266)
T 2xua_A 9 VNGTELHYRIDGERH---GNAPWIVLSNSLGTDLSMW-----APQVAALSK-HFRVLRYDTRGHGHSEAPKG-------- 71 (266)
T ss_dssp CSSSEEEEEEESCSS---SCCCEEEEECCTTCCGGGG-----GGGHHHHHT-TSEEEEECCTTSTTSCCCSS--------
T ss_pred ECCEEEEEEEcCCcc---CCCCeEEEecCccCCHHHH-----HHHHHHHhc-CeEEEEecCCCCCCCCCCCC--------
Confidence 389999998875421 1268999999999999999 588899975 59999999999999965321
Q ss_pred ccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhh
Q 011833 154 SANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYL 233 (476)
Q Consensus 154 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (476)
.|++++++
T Consensus 72 ------------------------------------------------------------------------~~~~~~~~ 79 (266)
T 2xua_A 72 ------------------------------------------------------------------------PYTIEQLT 79 (266)
T ss_dssp ------------------------------------------------------------------------CCCHHHHH
T ss_pred ------------------------------------------------------------------------CCCHHHHH
Confidence 35667776
Q ss_pred hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhh
Q 011833 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQ 313 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~ 313 (476)
+|+.++++.+ +. +++++|||||||.+++.+|.++| ++|+++|++++................. .
T Consensus 80 -~dl~~~l~~l----~~--~~~~lvGhS~Gg~va~~~A~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~~----~ 143 (266)
T 2xua_A 80 -GDVLGLMDTL----KI--ARANFCGLSMGGLTGVALAARHA-----DRIERVALCNTAARIGSPEVWVPRAVKA----R 143 (266)
T ss_dssp -HHHHHHHHHT----TC--CSEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCSSCSCHHHHHHHHHHH----H
T ss_pred -HHHHHHHHhc----CC--CceEEEEECHHHHHHHHHHHhCh-----hhhheeEEecCCCCCCchHHHHHHHHHH----H
Confidence 7888888765 22 38999999999999999999988 8999999998865432211011100000 0
Q ss_pred hccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcc
Q 011833 314 ALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTF 393 (476)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 393 (476)
... ...+..... ..|+..... ..+++..+.+... ........+......+.. .
T Consensus 144 ~~~-----~~~~~~~~~---------~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~ 196 (266)
T 2xua_A 144 TEG-----MHALADAVL---------PRWFTADYM---EREPVVLAMIRDV-FVHTDKEGYASNCEAIDA---------A 196 (266)
T ss_dssp HHC-----HHHHHHHHH---------HHHSCHHHH---HHCHHHHHHHHHH-HHTSCHHHHHHHHHHHHH---------C
T ss_pred hcC-----hHHHHHHHH---------HHHcCcccc---cCCHHHHHHHHHH-HhhCCHHHHHHHHHHHhc---------c
Confidence 000 000000000 000000000 0011111111100 001111111111111111 1
Q ss_pred cccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 394 FYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 394 ~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
+..+.+.++++|+|+|+|++|.++|++.++++.+.+++. +++++ + +||+.+ .+.|+++.+.|.+||++.
T Consensus 197 ~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~-~gH~~~---~e~p~~~~~~i~~fl~~~ 265 (266)
T 2xua_A 197 DLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAIAGA--RYVEL-----D-ASHISN---IERADAFTKTVVDFLTEQ 265 (266)
T ss_dssp CCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTC--EEEEE-----S-CCSSHH---HHTHHHHHHHHHHHHTC-
T ss_pred CchhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHhCCCC--EEEEe-----c-CCCCch---hcCHHHHHHHHHHHHHhc
Confidence 223467889999999999999999999999999999976 67777 8 999554 677899999999999753
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-25 Score=217.92 Aligned_cols=268 Identities=19% Similarity=0.218 Sum_probs=163.1
Q ss_pred CCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCC-HHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 74 NSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYS-FARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~-l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
.||.++++..+.+. .+|+|||+||++++...| .. ++..|+++||+|+++|+||||.|++....
T Consensus 8 ~~g~~l~y~~~G~~-----~~~~vvllHG~~~~~~~w-----~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~------ 71 (298)
T 1q0r_A 8 SGDVELWSDDFGDP-----ADPALLLVMGGNLSALGW-----PDEFARRLADGGLHVIRYDHRDTGRSTTRDFA------ 71 (298)
T ss_dssp ETTEEEEEEEESCT-----TSCEEEEECCTTCCGGGS-----CHHHHHHHHTTTCEEEEECCTTSTTSCCCCTT------
T ss_pred cCCeEEEEEeccCC-----CCCeEEEEcCCCCCccch-----HHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCC------
Confidence 48999998887432 357999999999999999 44 55899999999999999999999651100
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
...|+++++
T Consensus 72 -----------------------------------------------------------------------~~~~~~~~~ 80 (298)
T 1q0r_A 72 -----------------------------------------------------------------------AHPYGFGEL 80 (298)
T ss_dssp -----------------------------------------------------------------------TSCCCHHHH
T ss_pred -----------------------------------------------------------------------cCCcCHHHH
Confidence 013677777
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc-cccCChhhHHHhhcCcch
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL-DYRPSNSLLRLLLPLSDP 311 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~-~~~~~~~~~~~~~~~~~~ 311 (476)
+ +|+.++++.+ +. +++++|||||||.+++.+|.++| ++|+++|++++.. .... .............
T Consensus 81 a-~dl~~~l~~l----~~--~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~ 147 (298)
T 1q0r_A 81 A-ADAVAVLDGW----GV--DRAHVVGLSMGATITQVIALDHH-----DRLSSLTMLLGGGLDIDF-DANIERVMRGEPT 147 (298)
T ss_dssp H-HHHHHHHHHT----TC--SSEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCCTTCCH-HHHHHHHHHTCCC
T ss_pred H-HHHHHHHHHh----CC--CceEEEEeCcHHHHHHHHHHhCc-----hhhheeEEecccCCCccc-ccchhhhhhhhhh
Confidence 7 7888888876 22 48999999999999999999998 8999999998754 2100 0000000000000
Q ss_pred hhhccCCcCChHHHHHhhcc----CCCCchHHHHHHH--HhhcCC-CCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhC
Q 011833 312 IQALNVPVIPLGTFLAAIHP----FASSPPYVLSWLK--FLISAP-DMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEG 384 (476)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (476)
....+. +....+..+.. ......++..+.. ...... ...+++....+. ...+...
T Consensus 148 --~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 209 (298)
T 1q0r_A 148 --LDGLPG-PQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWE---------------ERAIDHA 209 (298)
T ss_dssp --SSCSCC-CCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHH---------------HHHHHHT
T ss_pred --hccccc-ccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHH---------------HHHhhcc
Confidence 000000 00001111100 0000001100000 000000 011222111111 1111110
Q ss_pred -----C-cccc--CCccccccc-CCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccc
Q 011833 385 -----G-LCDR--SGTFFYKDH-IGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGS 455 (476)
Q Consensus 385 -----~-~~~~--~g~~~~~~~-l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~ 455 (476)
. .... ....+.... +.++++|+|+|+|++|.++|++..+.+.+.+++. +++++ +++||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~--~~~~i-----~~~gH------ 276 (298)
T 1q0r_A 210 GGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTA--RLAEI-----PGMGH------ 276 (298)
T ss_dssp TTCCSCCCGGGGCCCCCGGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTTE--EEEEE-----TTCCS------
T ss_pred CCccchhhhhhhhhcCcccccccccccCCCEEEEEeCCCccCCHHHHHHHHHhCCCC--EEEEc-----CCCCC------
Confidence 1 1110 011123345 8899999999999999999999999999999875 67777 89999
Q ss_pred cCCccchhHHHHHHHHhh
Q 011833 456 RLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 456 ~~~~~~v~~~i~~fL~~~ 473 (476)
+.++++++.|.+||+++
T Consensus 277 -e~p~~~~~~i~~fl~~~ 293 (298)
T 1q0r_A 277 -ALPSSVHGPLAEVILAH 293 (298)
T ss_dssp -SCCGGGHHHHHHHHHHH
T ss_pred -CCcHHHHHHHHHHHHHH
Confidence 45789999999999876
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.94 E-value=9.4e-26 Score=217.17 Aligned_cols=261 Identities=16% Similarity=0.234 Sum_probs=159.9
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.||.++++..+. .+++|||+||++++...| ..++..|+++||+|+++|+||||.|.+...
T Consensus 5 ~~~g~~l~y~~~g-------~g~~vvllHG~~~~~~~w-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~------- 65 (274)
T 1a8q_A 5 TRDGVEIFYKDWG-------QGRPVVFIHGWPLNGDAW-----QDQLKAVVDAGYRGIAHDRRGHGHSTPVWD------- 65 (274)
T ss_dssp CTTSCEEEEEEEC-------SSSEEEEECCTTCCGGGG-----HHHHHHHHHTTCEEEEECCTTSTTSCCCSS-------
T ss_pred ccCCCEEEEEecC-------CCceEEEECCCcchHHHH-----HHHHHHHHhCCCeEEEEcCCCCCCCCCCCC-------
Confidence 6799999887762 257899999999999999 578899999999999999999999965321
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.++++++
T Consensus 66 -------------------------------------------------------------------------~~~~~~~ 72 (274)
T 1a8q_A 66 -------------------------------------------------------------------------GYDFDTF 72 (274)
T ss_dssp -------------------------------------------------------------------------CCSHHHH
T ss_pred -------------------------------------------------------------------------CCcHHHH
Confidence 2566666
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC-CCCCCcccccEEEEecccccccCChhhHHHhhcCcch
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC-GFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDP 311 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~-p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~ 311 (476)
+ +|+.++++.+ +. +++++|||||||.+++.+++++ | ++|+++|++++.......... .+
T Consensus 73 ~-~dl~~~l~~l----~~--~~~~lvGhS~Gg~ia~~~a~~~~p-----~~v~~lvl~~~~~~~~~~~~~--------~~ 132 (274)
T 1a8q_A 73 A-DDLNDLLTDL----DL--RDVTLVAHSMGGGELARYVGRHGT-----GRLRSAVLLSAIPPVMIKSDK--------NP 132 (274)
T ss_dssp H-HHHHHHHHHT----TC--CSEEEEEETTHHHHHHHHHHHHCS-----TTEEEEEEESCCCSCCBCCSS--------CT
T ss_pred H-HHHHHHHHHc----CC--CceEEEEeCccHHHHHHHHHHhhh-----HheeeeeEecCCCcccccccc--------Cc
Confidence 6 7888888765 22 3899999999999999987775 6 789999999874321100000 00
Q ss_pred hhhccCCcCChHHHHHhhccCCC--CchHHHHHHHHhhcC---CCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCc
Q 011833 312 IQALNVPVIPLGTFLAAIHPFAS--SPPYVLSWLKFLISA---PDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGL 386 (476)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (476)
..++. ..+..+...+. ...+...+....... .....++..+.+..... .............+..
T Consensus 133 ------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--- 201 (274)
T 1a8q_A 133 ------DGVPD-EVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAM-AQTIEGGVRCVDAFGY--- 201 (274)
T ss_dssp ------TSBCH-HHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHT-TSCHHHHHHHHHHHHH---
T ss_pred ------ccchH-HHHHHHHHHhhccHHHHHHHhcccccccccccccccHHHHHHHHHHhh-hcChHHHHHHHhhhhc---
Confidence 00000 00000000000 000000111111110 01122333332221111 1111111111111111
Q ss_pred cccCCcccccccCCCCcccEEEEeeCCCCcCCHHH-HHHHHHhcCCCceeEEEecCCCCCCCcccccccccC--Cccchh
Q 011833 387 CDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEA-VYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRL--AAYQVY 463 (476)
Q Consensus 387 ~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~-~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~--~~~~v~ 463 (476)
.+..+.+.++++|+|+|+|++|.++|++. .+.+.+.+++. +++++ +++||+.+ .+ .++++.
T Consensus 202 ------~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~e~~~p~~~~ 265 (274)
T 1a8q_A 202 ------TDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNA--ELKVY-----EGSSHGIA---MVPGDKEKFN 265 (274)
T ss_dssp ------CCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTC--EEEEE-----TTCCTTTT---TSTTHHHHHH
T ss_pred ------CcHHHHhhcCCCCEEEEecCcCCCCCcHHHHHHHHhhCCCc--eEEEE-----CCCCCcee---cccCCHHHHH
Confidence 11224578899999999999999999984 55666778765 77777 89999544 56 789999
Q ss_pred HHHHHHHHh
Q 011833 464 PCIIEFLTR 472 (476)
Q Consensus 464 ~~i~~fL~~ 472 (476)
+.|.+||++
T Consensus 266 ~~i~~fl~~ 274 (274)
T 1a8q_A 266 RDLLEFLNK 274 (274)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhcC
Confidence 999999963
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-26 Score=221.32 Aligned_cols=282 Identities=13% Similarity=0.105 Sum_probs=175.0
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
+..++.+ +|.++.+..+. ++|+|||+||++++...| ..++..|.++||+|+++|+||||.|.....
T Consensus 10 ~~~~~~~--~g~~l~~~~~g-------~~~~vv~~HG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~S~~~~~ 75 (309)
T 3u1t_A 10 AKRTVEV--EGATIAYVDEG-------SGQPVLFLHGNPTSSYLW-----RNIIPYVVAAGYRAVAPDLIGMGDSAKPDI 75 (309)
T ss_dssp CCEEEEE--TTEEEEEEEEE-------CSSEEEEECCTTCCGGGG-----TTTHHHHHHTTCEEEEECCTTSTTSCCCSS
T ss_pred cceEEEE--CCeEEEEEEcC-------CCCEEEEECCCcchhhhH-----HHHHHHHHhCCCEEEEEccCCCCCCCCCCc
Confidence 4566765 89999888763 257999999999999999 688999888899999999999999965321
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
T Consensus 76 -------------------------------------------------------------------------------- 75 (309)
T 3u1t_A 76 -------------------------------------------------------------------------------- 75 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCCh----hh
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSN----SL 301 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~----~~ 301 (476)
.+++++++ +|+.++++.+ +. ++++++||||||.+++.++.++| .+|+++|++++........ ..
T Consensus 76 ~~~~~~~~-~~~~~~~~~~----~~--~~~~lvGhS~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~ 143 (309)
T 3u1t_A 76 EYRLQDHV-AYMDGFIDAL----GL--DDMVLVIHDWGSVIGMRHARLNP-----DRVAAVAFMEALVPPALPMPSYEAM 143 (309)
T ss_dssp CCCHHHHH-HHHHHHHHHH----TC--CSEEEEEEEHHHHHHHHHHHHCT-----TTEEEEEEEEESCTTTCSBSCSGGG
T ss_pred ccCHHHHH-HHHHHHHHHc----CC--CceEEEEeCcHHHHHHHHHHhCh-----HhheEEEEeccCCCCcccccccccc
Confidence 25556666 6777777665 32 38999999999999999999988 7899999999865433110 00
Q ss_pred HHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHH
Q 011833 302 LRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVF 381 (476)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (476)
........ ..+..+. ...... .....+...++... .....+.++.+..+...............+....
T Consensus 144 ~~~~~~~~---~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (309)
T 3u1t_A 144 GPQLGPLF---RDLRTAD-----VGEKMV--LDGNFFVETILPEM-GVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREV 212 (309)
T ss_dssp HHHHHHHH---HHHTSTT-----HHHHHH--TTTCHHHHTHHHHT-SCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHS
T ss_pred chhhhHHH---HHHhccc-----hhhhhc--cccceehhhhcccc-cccccCCHHHHHHHHHhcCCccccchHHHHHHHh
Confidence 00000000 0000000 000000 00011111111111 1122344555554443222121112222222111
Q ss_pred HhCCcccc-C-CcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCc
Q 011833 382 QEGGLCDR-S-GTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAA 459 (476)
Q Consensus 382 ~~~~~~~~-~-g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~ 459 (476)
........ . ...++...+.++++|+|+|+|++|.++|++.++++.+.+++. ...++ +++||+.+ .+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~~~p 282 (309)
T 3u1t_A 213 PIGGEPAFAEAEVLKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENVPNL--EVRFV-----GAGTHFLQ---EDHP 282 (309)
T ss_dssp CBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTTE--EEEEE-----EEESSCHH---HHCH
T ss_pred ccccccchhhhhhhhhhhhcccCCCCEEEEecCCCCCCCHHHHHHHHhhCCCC--EEEEe-----cCCcccch---hhCH
Confidence 10000000 0 001222356788999999999999999999999999999875 55555 79999544 5788
Q ss_pred cchhHHHHHHHHhhc
Q 011833 460 YQVYPCIIEFLTRHD 474 (476)
Q Consensus 460 ~~v~~~i~~fL~~~~ 474 (476)
+++.+.|.+||+++.
T Consensus 283 ~~~~~~i~~fl~~~~ 297 (309)
T 3u1t_A 283 HLIGQGIADWLRRNK 297 (309)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999999864
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.94 E-value=7e-26 Score=221.67 Aligned_cols=261 Identities=13% Similarity=0.166 Sum_probs=164.6
Q ss_pred eeEeeCCC--c---eEEEEEEEcCCCCCCCCCCcEEEecCCC---CCcceeecCCCCCHH-HHHHhCCCcEEEecCCCCC
Q 011833 68 HYVAVPNS--D---WRLALWRYLPSPAAPQRNHPLLLLSGIG---TNAIGYDLSPEYSFA-RYMSGQGFDTWILEVRGAG 138 (476)
Q Consensus 68 ~~v~~~~d--G---~~L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~-~~L~~~Gy~V~~~D~rG~G 138 (476)
.++.+ + | .++++..+. .+++|||+||++ ++...| ..++ ..|++. |+|+++|+||||
T Consensus 11 ~~~~~--~~~g~~~~~l~y~~~G-------~g~~vvllHG~~~~~~~~~~w-----~~~~~~~L~~~-~~vi~~D~~G~G 75 (286)
T 2puj_A 11 KFVKI--NEKGFSDFNIHYNEAG-------NGETVIMLHGGGPGAGGWSNY-----YRNVGPFVDAG-YRVILKDSPGFN 75 (286)
T ss_dssp EEEEE--CSTTCSSEEEEEEEEC-------CSSEEEEECCCSTTCCHHHHH-----TTTHHHHHHTT-CEEEEECCTTST
T ss_pred eEEEe--cCCCcceEEEEEEecC-------CCCcEEEECCCCCCCCcHHHH-----HHHHHHHHhcc-CEEEEECCCCCC
Confidence 45654 5 7 889887752 247899999998 777778 5777 888765 999999999999
Q ss_pred CcccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhh
Q 011833 139 LSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQ 218 (476)
Q Consensus 139 ~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (476)
.|++...
T Consensus 76 ~S~~~~~------------------------------------------------------------------------- 82 (286)
T 2puj_A 76 KSDAVVM------------------------------------------------------------------------- 82 (286)
T ss_dssp TSCCCCC-------------------------------------------------------------------------
T ss_pred CCCCCCC-------------------------------------------------------------------------
Confidence 9975331
Q ss_pred hhcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCC
Q 011833 219 LDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPS 298 (476)
Q Consensus 219 ~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~ 298 (476)
..|++++++ +|+.++++.+ +. +++++|||||||.+++.+|.++| ++|+++|++++.......
T Consensus 83 ------~~~~~~~~a-~dl~~~l~~l----~~--~~~~lvGhS~GG~va~~~A~~~p-----~~v~~lvl~~~~~~~~~~ 144 (286)
T 2puj_A 83 ------DEQRGLVNA-RAVKGLMDAL----DI--DRAHLVGNAMGGATALNFALEYP-----DRIGKLILMGPGGLGPSM 144 (286)
T ss_dssp ------SSCHHHHHH-HHHHHHHHHT----TC--CCEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCSCCCCCS
T ss_pred ------cCcCHHHHH-HHHHHHHHHh----CC--CceEEEEECHHHHHHHHHHHhCh-----HhhheEEEECccccCCCc
Confidence 025556666 6777776654 33 38999999999999999999998 899999999986421110
Q ss_pred ----h-hhHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHH
Q 011833 299 ----N-SLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKL 373 (476)
Q Consensus 299 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (476)
. ...+.+ +..... ........++...........++.++...... ......
T Consensus 145 ~~~~~~~~~~~~--------------------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 200 (286)
T 2puj_A 145 FAPMPMEGIKLL--------------------FKLYAE--PSYETLKQMLQVFLYDQSLITEELLQGRWEAI--QRQPEH 200 (286)
T ss_dssp SSCSSCHHHHHH--------------------HHHHHS--CCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHH--HHCHHH
T ss_pred ccccchhhHHHH--------------------HHHhhC--CcHHHHHHHHHHHhcCCccCCHHHHHHHHHHh--hcCHHH
Confidence 0 000000 000000 00011111111111111112233332221100 001111
Q ss_pred HHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccc
Q 011833 374 ISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLV 453 (476)
Q Consensus 374 ~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~ 453 (476)
...+...+...... ..+..+.+.++++|+|+|+|++|.++|++.++++.+.+++. +++++ +++||...
T Consensus 201 ~~~~~~~~~~~~~~----~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~- 268 (286)
T 2puj_A 201 LKNFLISAQKAPLS----TWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDA--RLHVF-----SKCGAWAQ- 268 (286)
T ss_dssp HHHHHHHHHHSCGG----GGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSSSE--EEEEE-----SSCCSCHH-
T ss_pred HHHHHHHHhhhhcc----ccchhhHHhhcCCCEEEEEECCCCccCHHHHHHHHHHCCCC--eEEEe-----CCCCCCcc-
Confidence 22222211111100 12233567889999999999999999999999999999875 67777 89999554
Q ss_pred cccCCccchhHHHHHHHHh
Q 011833 454 GSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 454 ~~~~~~~~v~~~i~~fL~~ 472 (476)
.+.|+++.+.|.+||++
T Consensus 269 --~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 269 --WEHADEFNRLVIDFLRH 285 (286)
T ss_dssp --HHTHHHHHHHHHHHHHH
T ss_pred --ccCHHHHHHHHHHHHhc
Confidence 67889999999999975
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.94 E-value=7.6e-26 Score=217.91 Aligned_cols=263 Identities=16% Similarity=0.240 Sum_probs=160.1
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.||.++++..+.+. .+++|||+||++++...| ..++..|+++||+|+++|+||||.|++...
T Consensus 5 ~~~g~~l~y~~~g~~-----~~~~vvllHG~~~~~~~w-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~------- 67 (275)
T 1a88_A 5 TSDGTNIFYKDWGPR-----DGLPVVFHHGWPLSADDW-----DNQMLFFLSHGYRVIAHDRRGHGRSDQPST------- 67 (275)
T ss_dssp CTTSCEEEEEEESCT-----TSCEEEEECCTTCCGGGG-----HHHHHHHHHTTCEEEEECCTTSTTSCCCSS-------
T ss_pred ccCCCEEEEEEcCCC-----CCceEEEECCCCCchhhH-----HHHHHHHHHCCceEEEEcCCcCCCCCCCCC-------
Confidence 679999998887432 357899999999999999 588999999999999999999999965321
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.++++++
T Consensus 68 -------------------------------------------------------------------------~~~~~~~ 74 (275)
T 1a88_A 68 -------------------------------------------------------------------------GHDMDTY 74 (275)
T ss_dssp -------------------------------------------------------------------------CCSHHHH
T ss_pred -------------------------------------------------------------------------CCCHHHH
Confidence 2566776
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC-CCCCCcccccEEEEecccccccCChhhHHHhhcCcch
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC-GFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDP 311 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~-p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~ 311 (476)
+ +|+.++++.+ +. ++++++||||||.+++.+++.+ | ++|+++|++++.......... .+
T Consensus 75 ~-~dl~~~l~~l----~~--~~~~lvGhS~Gg~ia~~~a~~~~p-----~~v~~lvl~~~~~~~~~~~~~----~~---- 134 (275)
T 1a88_A 75 A-ADVAALTEAL----DL--RGAVHIGHSTGGGEVARYVARAEP-----GRVAKAVLVSAVPPVMVKSDT----NP---- 134 (275)
T ss_dssp H-HHHHHHHHHH----TC--CSEEEEEETHHHHHHHHHHHHSCT-----TSEEEEEEESCCCSCCBCBTT----BT----
T ss_pred H-HHHHHHHHHc----CC--CceEEEEeccchHHHHHHHHHhCc-----hheEEEEEecCCCcccccCcc----Cc----
Confidence 6 7888888876 22 3899999999999999877775 6 889999999874321100000 00
Q ss_pred hhhccCCcCChHHHHHhhccCC-CCc-hHHHHHHH-HhhcC---CCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC
Q 011833 312 IQALNVPVIPLGTFLAAIHPFA-SSP-PYVLSWLK-FLISA---PDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG 385 (476)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (476)
..++. ..+..+.... ... .+...... ..... .....++..+.+....... ...........+..
T Consensus 135 ------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-- 204 (275)
T 1a88_A 135 ------DGLPL-EVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMG-AANAHYECIAAFSE-- 204 (275)
T ss_dssp ------TSBCH-HHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHS-CHHHHHHHHHHHHH--
T ss_pred ------ccCCH-HHHHHHHHHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhc-chHhHHHHHhhhhh--
Confidence 00000 0000000000 000 00000000 00000 0012223222221111000 01111111111111
Q ss_pred ccccCCcccccccCCCCcccEEEEeeCCCCcCCHHH-HHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhH
Q 011833 386 LCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEA-VYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 386 ~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~-~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
.+..+.+.++++|+|+|+|++|.++|++. .+.+.+.+++. +++++ +++||..+ .+.|+++.+
T Consensus 205 -------~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~e~p~~~~~ 267 (275)
T 1a88_A 205 -------TDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANA--TLKSY-----EGLPHGML---STHPEVLNP 267 (275)
T ss_dssp -------CCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTE--EEEEE-----TTCCTTHH---HHCHHHHHH
T ss_pred -------cccccccccCCCCEEEEecCCCccCCcHHHHHHHHhhCCCc--EEEEc-----CCCCccHH---HhCHHHHHH
Confidence 11223567899999999999999999874 55666777754 77777 89999544 578899999
Q ss_pred HHHHHHHh
Q 011833 465 CIIEFLTR 472 (476)
Q Consensus 465 ~i~~fL~~ 472 (476)
.|.+||++
T Consensus 268 ~i~~fl~~ 275 (275)
T 1a88_A 268 DLLAFVKS 275 (275)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhhC
Confidence 99999964
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-26 Score=226.55 Aligned_cols=269 Identities=12% Similarity=0.075 Sum_probs=163.8
Q ss_pred eeeEeeCCCc----eEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccc
Q 011833 67 LHYVAVPNSD----WRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 67 ~~~v~~~~dG----~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~ 142 (476)
..++.+ +| .++++..+.+.. .+++|||+||+++++..| ..++..|+++||+|+++|+||||.|++
T Consensus 21 ~~~~~~--~g~~~g~~l~y~~~G~~~----~g~~vvllHG~~~~~~~w-----~~~~~~L~~~g~rvia~Dl~G~G~S~~ 89 (297)
T 2xt0_A 21 PHYLEG--LPGFEGLRMHYVDEGPRD----AEHTFLCLHGEPSWSFLY-----RKMLPVFTAAGGRVVAPDLFGFGRSDK 89 (297)
T ss_dssp CEEECC--CTTCTTCCEEEEEESCTT----CSCEEEEECCTTCCGGGG-----TTTHHHHHHTTCEEEEECCTTSTTSCE
T ss_pred cEEEec--cCCCCceEEEEEEccCCC----CCCeEEEECCCCCcceeH-----HHHHHHHHhCCcEEEEeCCCCCCCCCC
Confidence 345554 66 899888874321 158999999999999999 689999999999999999999999975
Q ss_pred ccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLI 222 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (476)
+...
T Consensus 90 ~~~~---------------------------------------------------------------------------- 93 (297)
T 2xt0_A 90 PTDD---------------------------------------------------------------------------- 93 (297)
T ss_dssp ESCG----------------------------------------------------------------------------
T ss_pred CCCc----------------------------------------------------------------------------
Confidence 3310
Q ss_pred cccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCC-hhh
Q 011833 223 VKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPS-NSL 301 (476)
Q Consensus 223 ~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~-~~~ 301 (476)
..|++++++ +|+.++++.+ +. +++++|||||||.+++.+|.++| ++|+++|++++....... ...
T Consensus 94 --~~~~~~~~a-~dl~~ll~~l----~~--~~~~lvGhS~Gg~va~~~A~~~P-----~~v~~lvl~~~~~~~~~~~~~~ 159 (297)
T 2xt0_A 94 --AVYTFGFHR-RSLLAFLDAL----QL--ERVTLVCQDWGGILGLTLPVDRP-----QLVDRLIVMNTALAVGLSPGKG 159 (297)
T ss_dssp --GGCCHHHHH-HHHHHHHHHH----TC--CSEEEEECHHHHHHHTTHHHHCT-----TSEEEEEEESCCCCSSSCSCHH
T ss_pred --ccCCHHHHH-HHHHHHHHHh----CC--CCEEEEEECchHHHHHHHHHhCh-----HHhcEEEEECCCCCcccCCchh
Confidence 136777777 7888888766 33 38999999999999999999998 899999999985421110 000
Q ss_pred HHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCC-HHHHHHHHHH
Q 011833 302 LRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIP-TKLISQLTTV 380 (476)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 380 (476)
...+.... ...+.++...++.... ..+.++....+... +.... ......+...
T Consensus 160 ~~~~~~~~-----~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 213 (297)
T 2xt0_A 160 FESWRDFV-----ANSPDLDVGKLMQRAI--------------------PGITDAEVAAYDAP-FPGPEFKAGVRRFPAI 213 (297)
T ss_dssp HHHHHHHH-----HTCTTCCHHHHHHHHS--------------------TTCCHHHHHHHHTT-CSSGGGCHHHHHGGGG
T ss_pred HHHHHHHh-----hcccccchhHHHhccC--------------------ccCCHHHHHHHhcc-ccCcchhHHHHHHHHh
Confidence 00000000 0000011000110000 11222222222110 00000 0000000000
Q ss_pred HHhCC-ccccCCcccccccCC-CCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCC
Q 011833 381 FQEGG-LCDRSGTFFYKDHIG-KTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLA 458 (476)
Q Consensus 381 ~~~~~-~~~~~g~~~~~~~l~-~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~ 458 (476)
..... ...........+.+. ++++|+|+|+|++|.++| +..+++.+.+++......++ +++||+.. . .
T Consensus 214 ~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~~p~~~~~~~~~-----~~~GH~~~---~-~ 283 (297)
T 2xt0_A 214 VPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLG-PEVMGMLRQAIRGCPEPMIV-----EAGGHFVQ---E-H 283 (297)
T ss_dssp SCCSTTSTTHHHHHHHHHHHHHTCCSCEEEEEETTCSSSS-HHHHHHHHHHSTTCCCCEEE-----TTCCSSGG---G-G
T ss_pred CccccccchhhHHHHHHHHhhhccCCCeEEEEeCCCcccC-hHHHHHHHhCCCCeeEEecc-----CCCCcCcc---c-C
Confidence 00000 000000011123566 899999999999999999 88899999999875443334 89999543 6 7
Q ss_pred ccchhHHHHHHHHh
Q 011833 459 AYQVYPCIIEFLTR 472 (476)
Q Consensus 459 ~~~v~~~i~~fL~~ 472 (476)
|+++.+.|.+||++
T Consensus 284 p~~~~~~i~~fl~~ 297 (297)
T 2xt0_A 284 GEPIARAALAAFGQ 297 (297)
T ss_dssp CHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhC
Confidence 89999999999863
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-25 Score=224.03 Aligned_cols=288 Identities=18% Similarity=0.201 Sum_probs=167.3
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHh-CCCcEEEecCCCCCCccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSG-QGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~-~Gy~V~~~D~rG~G~S~~~~ 144 (476)
+..++.+ +|.++++..+.+... ...++||||+||++++...| ......|++ .||+|+++|+||||.|++..
T Consensus 29 ~~~~v~~--~g~~l~y~~~G~~~~-~~~g~plvllHG~~~~~~~w-----~~~~~~l~~~~~~~Via~D~rG~G~S~~~~ 100 (330)
T 3nwo_A 29 SSRTVPF--GDHETWVQVTTPENA-QPHALPLIVLHGGPGMAHNY-----VANIAALADETGRTVIHYDQVGCGNSTHLP 100 (330)
T ss_dssp CEEEEEE--TTEEEEEEEECCSSC-CTTCCCEEEECCTTTCCSGG-----GGGGGGHHHHHTCCEEEECCTTSTTSCCCT
T ss_pred cceeEee--cCcEEEEEEecCccC-CCCCCcEEEECCCCCCchhH-----HHHHHHhccccCcEEEEECCCCCCCCCCCC
Confidence 4556665 899999988865321 11135899999999888888 456677775 69999999999999997522
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
... .
T Consensus 101 ~~~----------------------------------------------------------------------------~ 104 (330)
T 3nwo_A 101 DAP----------------------------------------------------------------------------A 104 (330)
T ss_dssp TSC----------------------------------------------------------------------------G
T ss_pred CCc----------------------------------------------------------------------------c
Confidence 100 0
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHH
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRL 304 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~ 304 (476)
..|++++++ +|+.++++.+ +. +++++|||||||.+++.+|.++| ++|+++|+++++............
T Consensus 105 ~~~~~~~~a-~dl~~ll~~l----g~--~~~~lvGhSmGG~va~~~A~~~P-----~~v~~lvl~~~~~~~~~~~~~~~~ 172 (330)
T 3nwo_A 105 DFWTPQLFV-DEFHAVCTAL----GI--ERYHVLGQSWGGMLGAEIAVRQP-----SGLVSLAICNSPASMRLWSEAAGD 172 (330)
T ss_dssp GGCCHHHHH-HHHHHHHHHH----TC--CSEEEEEETHHHHHHHHHHHTCC-----TTEEEEEEESCCSBHHHHHHHHHH
T ss_pred ccccHHHHH-HHHHHHHHHc----CC--CceEEEecCHHHHHHHHHHHhCC-----ccceEEEEecCCcchHHHHHHHHH
Confidence 125666666 7888888766 33 38999999999999999999998 899999999876532211000000
Q ss_pred hhcCcchhhhccCCcCChHHHHHh-hccCCCCchHHH---HHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHH
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAA-IHPFASSPPYVL---SWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTV 380 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (476)
+........ ...+... .........+.. .+.............+....+.... ..+ ..+..+
T Consensus 173 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~ 238 (330)
T 3nwo_A 173 LRAQLPAET--------RAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQME--AEP----TVYHTM 238 (330)
T ss_dssp HHHHSCHHH--------HHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHH--HSC----HHHHHH
T ss_pred HHHhcCHHH--------HHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhc--cch----hhhhcc
Confidence 000000000 0000000 000001111100 0111111110011111110000000 000 000011
Q ss_pred HHhCCcccc--CCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCC
Q 011833 381 FQEGGLCDR--SGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLA 458 (476)
Q Consensus 381 ~~~~~~~~~--~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~ 458 (476)
.....+... ....+..+.+.+|++|||+|+|++|.++| ...+++.+.+++. +++++ |++||+.+ .|.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p-~~~~~~~~~ip~~--~~~~i-----~~~gH~~~---~e~ 307 (330)
T 3nwo_A 239 NGPNEFHVVGTLGDWSVIDRLPDVTAPVLVIAGEHDEATP-KTWQPFVDHIPDV--RSHVF-----PGTSHCTH---LEK 307 (330)
T ss_dssp TCSCSSSCCSGGGGCBCGGGGGGCCSCEEEEEETTCSSCH-HHHHHHHHHCSSE--EEEEE-----TTCCTTHH---HHS
T ss_pred cCchhhhhhccccCCchhhhcccCCCCeEEEeeCCCccCh-HHHHHHHHhCCCC--cEEEe-----CCCCCchh---hcC
Confidence 000011100 01123345788999999999999999886 4678899999975 77787 99999544 688
Q ss_pred ccchhHHHHHHHHhhc
Q 011833 459 AYQVYPCIIEFLTRHD 474 (476)
Q Consensus 459 ~~~v~~~i~~fL~~~~ 474 (476)
|+++.+.|.+||++++
T Consensus 308 p~~~~~~i~~FL~~~~ 323 (330)
T 3nwo_A 308 PEEFRAVVAQFLHQHD 323 (330)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999998864
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.94 E-value=8.2e-26 Score=217.47 Aligned_cols=261 Identities=15% Similarity=0.230 Sum_probs=158.6
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.||.++++..+. .+++|||+||++++...| ..+++.|+++||+|+++|+||||.|.+...
T Consensus 5 ~~~g~~l~y~~~g-------~~~~vvllHG~~~~~~~~-----~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~------- 65 (273)
T 1a8s_A 5 TRDGTQIYYKDWG-------SGQPIVFSHGWPLNADSW-----ESQMIFLAAQGYRVIAHDRRGHGRSSQPWS------- 65 (273)
T ss_dssp CTTSCEEEEEEES-------CSSEEEEECCTTCCGGGG-----HHHHHHHHHTTCEEEEECCTTSTTSCCCSS-------
T ss_pred cCCCcEEEEEEcC-------CCCEEEEECCCCCcHHHH-----hhHHhhHhhCCcEEEEECCCCCCCCCCCCC-------
Confidence 5799999887762 257899999999999999 578999999999999999999999965321
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.++++++
T Consensus 66 -------------------------------------------------------------------------~~~~~~~ 72 (273)
T 1a8s_A 66 -------------------------------------------------------------------------GNDMDTY 72 (273)
T ss_dssp -------------------------------------------------------------------------CCSHHHH
T ss_pred -------------------------------------------------------------------------CCCHHHH
Confidence 2566666
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC-CCCCCcccccEEEEecccccccCChhhHHHhhcCcch
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC-GFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDP 311 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~-p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~ 311 (476)
+ +|+.++++.+ +. ++++++||||||.+++.+++++ | ++|+++|++++.......... .+
T Consensus 73 ~-~dl~~~l~~l----~~--~~~~lvGhS~Gg~ia~~~a~~~~p-----~~v~~lvl~~~~~~~~~~~~~--------~~ 132 (273)
T 1a8s_A 73 A-DDLAQLIEHL----DL--RDAVLFGFSTGGGEVARYIGRHGT-----ARVAKAGLISAVPPLMLKTEA--------NP 132 (273)
T ss_dssp H-HHHHHHHHHT----TC--CSEEEEEETHHHHHHHHHHHHHCS-----TTEEEEEEESCCCSCCBCCSS--------CT
T ss_pred H-HHHHHHHHHh----CC--CCeEEEEeChHHHHHHHHHHhcCc-----hheeEEEEEcccCcccccCcc--------cc
Confidence 6 7888887765 22 3899999999999999977765 6 789999999864321100000 00
Q ss_pred hhhccCCcCChHHHHHhhccCCC--CchHHHHHHH-Hhhc---CCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC
Q 011833 312 IQALNVPVIPLGTFLAAIHPFAS--SPPYVLSWLK-FLIS---APDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG 385 (476)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (476)
...+. ..+..+..... ...+...+.. .... ......++.++.+....... ...........+..
T Consensus 133 ------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-- 202 (273)
T 1a8s_A 133 ------GGLPM-EVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAA-GHKNAYDCIKAFSE-- 202 (273)
T ss_dssp ------TSBCH-HHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHS-CHHHHHHHHHHHHH--
T ss_pred ------ccCcH-HHHHHHHHHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhcccc-chhHHHHHHHHHhc--
Confidence 00000 00000000000 0000000000 0000 00012223222221111000 11111111111111
Q ss_pred ccccCCcccccccCCCCcccEEEEeeCCCCcCCHH-HHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhH
Q 011833 386 LCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTE-AVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 386 ~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~-~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
.+..+.+.++++|+|+|+|++|.++|++ ..+.+.+.+++. +++++ +++||..+ .+.|+++.+
T Consensus 203 -------~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~e~p~~~~~ 265 (273)
T 1a8s_A 203 -------TDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGS--TLKIY-----SGAPHGLT---DTHKDQLNA 265 (273)
T ss_dssp -------CCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTC--EEEEE-----TTCCSCHH---HHTHHHHHH
T ss_pred -------cChhhhhhcCCCCEEEEECCCCccCChHHHHHHHHHhCCCc--EEEEe-----CCCCCcch---hhCHHHHHH
Confidence 1122356789999999999999999988 456667778765 67777 89999544 578899999
Q ss_pred HHHHHHHh
Q 011833 465 CIIEFLTR 472 (476)
Q Consensus 465 ~i~~fL~~ 472 (476)
.|.+||++
T Consensus 266 ~i~~fl~~ 273 (273)
T 1a8s_A 266 DLLAFIKG 273 (273)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 99999964
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=221.40 Aligned_cols=264 Identities=16% Similarity=0.236 Sum_probs=163.9
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCC---CCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIG---TNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~ 142 (476)
+..++.+ +|.++.+..+. .+++|||+||++ ++...| ..++..|++. |+|+++|+||||.|.
T Consensus 17 ~~~~~~~--~g~~l~y~~~g-------~g~~vvllHG~~~~~~~~~~~-----~~~~~~L~~~-~~vi~~Dl~G~G~S~- 80 (296)
T 1j1i_A 17 VERFVNA--GGVETRYLEAG-------KGQPVILIHGGGAGAESEGNW-----RNVIPILARH-YRVIAMDMLGFGKTA- 80 (296)
T ss_dssp EEEEEEE--TTEEEEEEEEC-------CSSEEEEECCCSTTCCHHHHH-----TTTHHHHTTT-SEEEEECCTTSTTSC-
T ss_pred cceEEEE--CCEEEEEEecC-------CCCeEEEECCCCCCcchHHHH-----HHHHHHHhhc-CEEEEECCCCCCCCC-
Confidence 4556664 89999887652 257899999997 666778 5788888765 999999999999996
Q ss_pred ccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLI 222 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (476)
...
T Consensus 81 ~~~----------------------------------------------------------------------------- 83 (296)
T 1j1i_A 81 KPD----------------------------------------------------------------------------- 83 (296)
T ss_dssp CCS-----------------------------------------------------------------------------
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 221
Q ss_pred cccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhH
Q 011833 223 VKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLL 302 (476)
Q Consensus 223 ~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~ 302 (476)
..|++++++ +|+.++++.+ +. ++++++|||||||.+++.+|.++| ++|+++|++++...........
T Consensus 84 --~~~~~~~~~-~dl~~~l~~l----~~-~~~~~lvGhS~Gg~ia~~~A~~~p-----~~v~~lvl~~~~~~~~~~~~~~ 150 (296)
T 1j1i_A 84 --IEYTQDRRI-RHLHDFIKAM----NF-DGKVSIVGNSMGGATGLGVSVLHS-----ELVNALVLMGSAGLVVEIHEDL 150 (296)
T ss_dssp --SCCCHHHHH-HHHHHHHHHS----CC-SSCEEEEEEHHHHHHHHHHHHHCG-----GGEEEEEEESCCBCCCC-----
T ss_pred --CCCCHHHHH-HHHHHHHHhc----CC-CCCeEEEEEChhHHHHHHHHHhCh-----HhhhEEEEECCCCCCCCCCchH
Confidence 125566666 6777666654 32 148999999999999999999988 8999999999865321110000
Q ss_pred HHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHH
Q 011833 303 RLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQ 382 (476)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (476)
+.+ .............+...........++.................+..+.....
T Consensus 151 ~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (296)
T 1j1i_A 151 RPI------------------------INYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIR 206 (296)
T ss_dssp -----------------------------CCSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred HHH------------------------hcccCCchHHHHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHH
Confidence 000 00000000111111111222222233333222111100000111111111111
Q ss_pred hCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccch
Q 011833 383 EGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQV 462 (476)
Q Consensus 383 ~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v 462 (476)
.. .........+.++++|+|+|+|++|.++|++.++++.+.+++. +++++ +++||+.+ .+.|+++
T Consensus 207 ~~-----~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~~ 271 (296)
T 1j1i_A 207 EQ-----GGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDS--WGYII-----PHCGHWAM---IEHPEDF 271 (296)
T ss_dssp HH-----TSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTE--EEEEE-----SSCCSCHH---HHSHHHH
T ss_pred hc-----ccccccHHHhhcCCCCEEEEEECCCcccCHHHHHHHHHHCCCC--EEEEE-----CCCCCCch---hcCHHHH
Confidence 00 0011122357889999999999999999999999999999865 67777 89999554 5778999
Q ss_pred hHHHHHHHHhhc
Q 011833 463 YPCIIEFLTRHD 474 (476)
Q Consensus 463 ~~~i~~fL~~~~ 474 (476)
.+.|.+||+++.
T Consensus 272 ~~~i~~fl~~~~ 283 (296)
T 1j1i_A 272 ANATLSFLSLRV 283 (296)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHhccC
Confidence 999999998753
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=216.18 Aligned_cols=229 Identities=16% Similarity=0.230 Sum_probs=149.2
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhh
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKS 173 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (476)
+++|||+||++++...| ..+++.|+++||+|+++|+||||.|....
T Consensus 16 ~~~vvllHG~~~~~~~~-----~~~~~~L~~~g~~vi~~D~~GhG~s~~~~----------------------------- 61 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSADV-----RMLGRFLESKGYTCHAPIYKGHGVPPEEL----------------------------- 61 (247)
T ss_dssp SCEEEEECCTTCCTHHH-----HHHHHHHHHTTCEEEECCCTTSSSCHHHH-----------------------------
T ss_pred CcEEEEECCCCCChHHH-----HHHHHHHHHCCCEEEecccCCCCCCHHHh-----------------------------
Confidence 57899999999999999 57899999999999999999999763211
Q ss_pred hHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCC
Q 011833 174 QLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDG 253 (476)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ 253 (476)
..++++++. +|+.++++++.+. +. +
T Consensus 62 ---------------------------------------------------~~~~~~~~~-~d~~~~~~~l~~~-~~--~ 86 (247)
T 1tqh_A 62 ---------------------------------------------------VHTGPDDWW-QDVMNGYEFLKNK-GY--E 86 (247)
T ss_dssp ---------------------------------------------------TTCCHHHHH-HHHHHHHHHHHHH-TC--C
T ss_pred ---------------------------------------------------cCCCHHHHH-HHHHHHHHHHHHc-CC--C
Confidence 024556655 6788888887654 33 3
Q ss_pred cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccCC
Q 011833 254 KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFA 333 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (476)
++++|||||||.+++.+|.++| |+++|+++++............+. ........
T Consensus 87 ~~~lvG~SmGG~ia~~~a~~~p-------v~~lvl~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~-- 140 (247)
T 1tqh_A 87 KIAVAGLSLGGVFSLKLGYTVP-------IEGIVTMCAPMYIKSEETMYEGVL-----------------EYAREYKK-- 140 (247)
T ss_dssp CEEEEEETHHHHHHHHHHTTSC-------CSCEEEESCCSSCCCHHHHHHHHH-----------------HHHHHHHH--
T ss_pred eEEEEEeCHHHHHHHHHHHhCC-------CCeEEEEcceeecCcchhhhHHHH-----------------HHHHHhhc--
Confidence 8999999999999999998864 889998876543211100000000 00000000
Q ss_pred CCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeCC
Q 011833 334 SSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQ 413 (476)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~ 413 (476)
.. ...++......... ...+...+..+..+. .+..+.+.++++|+|+|+|++
T Consensus 141 ------------~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~l~~i~~P~Lii~G~~ 192 (247)
T 1tqh_A 141 ------------RE----GKSEEQIEQEMEKF-KQTPMKTLKALQELI-----------ADVRDHLDLIYAPTFVVQARH 192 (247)
T ss_dssp ------------HH----TCCHHHHHHHHHHH-TTSCCTTHHHHHHHH-----------HHHHHTGGGCCSCEEEEEETT
T ss_pred ------------cc----ccchHHHHhhhhcc-cCCCHHHHHHHHHHH-----------HHHHhhcccCCCCEEEEecCC
Confidence 00 00111111111000 000111111111110 011246788999999999999
Q ss_pred CCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccC-CccchhHHHHHHHHhh
Q 011833 414 DLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRL-AAYQVYPCIIEFLTRH 473 (476)
Q Consensus 414 D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~-~~~~v~~~i~~fL~~~ 473 (476)
|.++|++.++++.+.+++..++++++ +++||... .+ .++++.+.|.+||++.
T Consensus 193 D~~~p~~~~~~~~~~~~~~~~~~~~~-----~~~gH~~~---~e~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 193 DEMINPDSANIIYNEIESPVKQIKWY-----EQSGHVIT---LDQEKDQLHEDIYAFLESL 245 (247)
T ss_dssp CSSSCTTHHHHHHHHCCCSSEEEEEE-----TTCCSSGG---GSTTHHHHHHHHHHHHHHS
T ss_pred CCCCCcchHHHHHHhcCCCceEEEEe-----CCCceeec---cCccHHHHHHHHHHHHHhc
Confidence 99999999999999999755678887 89999544 44 4689999999999864
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.4e-25 Score=212.13 Aligned_cols=275 Identities=13% Similarity=0.136 Sum_probs=163.1
Q ss_pred EeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcc
Q 011833 70 VAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGED 149 (476)
Q Consensus 70 v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~ 149 (476)
+.++.+|..+.++.+...+. .+.+|+||++||++++...| ..+++.|+++||.|+++|+||+|.|.....
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~-~~~~p~vv~~hG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---- 92 (315)
T 4f0j_A 23 LDFTSQGQPLSMAYLDVAPK-KANGRTILLMHGKNFCAGTW-----ERTIDVLADAGYRVIAVDQVGFCKSSKPAH---- 92 (315)
T ss_dssp EEEEETTEEEEEEEEEECCS-SCCSCEEEEECCTTCCGGGG-----HHHHHHHHHTTCEEEEECCTTSTTSCCCSS----
T ss_pred EEEecCCCCeeEEEeecCCC-CCCCCeEEEEcCCCCcchHH-----HHHHHHHHHCCCeEEEeecCCCCCCCCCCc----
Confidence 33345776666554433322 34679999999999999999 589999999999999999999999965331
Q ss_pred ccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCc
Q 011833 150 SMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDF 229 (476)
Q Consensus 150 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (476)
..+++
T Consensus 93 ---------------------------------------------------------------------------~~~~~ 97 (315)
T 4f0j_A 93 ---------------------------------------------------------------------------YQYSF 97 (315)
T ss_dssp ---------------------------------------------------------------------------CCCCH
T ss_pred ---------------------------------------------------------------------------cccCH
Confidence 12444
Q ss_pred hhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCc
Q 011833 230 DHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLS 309 (476)
Q Consensus 230 ~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~ 309 (476)
++++ +|+.++++.+ +. ++++++||||||.+++.++.++| .+|+++|++++....... ....+.
T Consensus 98 ~~~~-~~~~~~~~~~----~~--~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~~~----~~~~~~- 160 (315)
T 4f0j_A 98 QQLA-ANTHALLERL----GV--ARASVIGHSMGGMLATRYALLYP-----RQVERLVLVNPIGLEDWK----ALGVPW- 160 (315)
T ss_dssp HHHH-HHHHHHHHHT----TC--SCEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCSCSSCHH----HHTCCC-
T ss_pred HHHH-HHHHHHHHHh----CC--CceEEEEecHHHHHHHHHHHhCc-----HhhheeEEecCcccCCcc----cccchh-
Confidence 5544 5665555543 33 38999999999999999999987 789999999985421110 000000
Q ss_pred chhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCC-CCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccc
Q 011833 310 DPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPD-MMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCD 388 (476)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (476)
.....+...... .................. ................... .....+..........
T Consensus 161 ----------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~- 226 (315)
T 4f0j_A 161 ----------RSVDDWYRRDLQ--TSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKG-RESVAWNSALTYDMIF- 226 (315)
T ss_dssp ----------CCHHHHHHHHTT--CCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTT-HHHHHHHHHHHHHHHH-
T ss_pred ----------hhhHHHHhhccc--CChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccC-cchhhHHHHHhcCccc-
Confidence 000011111100 000111111111111110 0001111111111111111 1111111111100000
Q ss_pred cCCcccccccCCCCcccEEEEeeCCCCcCC----------------HHHHHHHHHhcCCCceeEEEecCCCCCCCccccc
Q 011833 389 RSGTFFYKDHIGKTNVPVLALAADQDLICP----------------TEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDL 452 (476)
Q Consensus 389 ~~g~~~~~~~l~~i~vPvLii~G~~D~~vp----------------~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~ 452 (476)
.......+.++++|+|+++|++|.++| .+.++.+.+.+++. +++++ +++||+.+
T Consensus 227 ---~~~~~~~l~~~~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~ 296 (315)
T 4f0j_A 227 ---TQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQA--TLVEF-----PDLGHTPQ 296 (315)
T ss_dssp ---HCCCGGGGGGCCSCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTTE--EEEEE-----TTCCSCHH
T ss_pred ---cchhhhhcccCCCCeEEEEecCCCcCccccccccccccccccchhhhhHHHhhcCCc--eEEEe-----CCCCcchh
Confidence 112234678899999999999999999 78889999999864 77777 89999654
Q ss_pred ccccCCccchhHHHHHHHHhh
Q 011833 453 VGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 453 ~~~~~~~~~v~~~i~~fL~~~ 473 (476)
.+.++++.+.|.+||+++
T Consensus 297 ---~~~p~~~~~~i~~fl~~~ 314 (315)
T 4f0j_A 297 ---IQAPERFHQALLEGLQTQ 314 (315)
T ss_dssp ---HHSHHHHHHHHHHHHCC-
T ss_pred ---hhCHHHHHHHHHHHhccC
Confidence 677899999999999875
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-25 Score=218.26 Aligned_cols=276 Identities=12% Similarity=0.075 Sum_probs=162.0
Q ss_pred CCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcccccc
Q 011833 74 NSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMIT 153 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~ 153 (476)
.+|.++++.... .+++|||+||++++...| ..++..|++. |+|+++|+||||.|+++ ...
T Consensus 16 ~~g~~l~y~~~G-------~g~~lvllHG~~~~~~~w-----~~~~~~L~~~-~~via~Dl~G~G~S~~~-~~~------ 75 (294)
T 1ehy_A 16 LPDVKIHYVREG-------AGPTLLLLHGWPGFWWEW-----SKVIGPLAEH-YDVIVPDLRGFGDSEKP-DLN------ 75 (294)
T ss_dssp CSSCEEEEEEEE-------CSSEEEEECCSSCCGGGG-----HHHHHHHHTT-SEEEEECCTTSTTSCCC-CTT------
T ss_pred ECCEEEEEEEcC-------CCCEEEEECCCCcchhhH-----HHHHHHHhhc-CEEEecCCCCCCCCCCC-ccc------
Confidence 489999887763 258999999999999999 5888999876 99999999999999763 200
Q ss_pred ccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhh
Q 011833 154 SANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYL 233 (476)
Q Consensus 154 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (476)
....|++++++
T Consensus 76 ---------------------------------------------------------------------~~~~~~~~~~a 86 (294)
T 1ehy_A 76 ---------------------------------------------------------------------DLSKYSLDKAA 86 (294)
T ss_dssp ---------------------------------------------------------------------CGGGGCHHHHH
T ss_pred ---------------------------------------------------------------------cccCcCHHHHH
Confidence 00025666666
Q ss_pred hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhh
Q 011833 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQ 313 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~ 313 (476)
+|+.++++.+ +. +++++|||||||.+++.+|.++| ++|+++|+++++.................+. .
T Consensus 87 -~dl~~ll~~l----~~--~~~~lvGhS~Gg~va~~~A~~~P-----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~ 153 (294)
T 1ehy_A 87 -DDQAALLDAL----GI--EKAYVVGHDFAAIVLHKFIRKYS-----DRVIKAAIFDPIQPDFGPVYFGLGHVHESWY-S 153 (294)
T ss_dssp -HHHHHHHHHT----TC--CCEEEEEETHHHHHHHHHHHHTG-----GGEEEEEEECCSCTTC-----------CCHH-H
T ss_pred -HHHHHHHHHc----CC--CCEEEEEeChhHHHHHHHHHhCh-----hheeEEEEecCCCCCcchhhccchhccCceE-E
Confidence 7887777765 33 38999999999999999999998 8999999999743111100000000000000 0
Q ss_pred hccCCcCChHHHHHhhccCCCC--chHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCC
Q 011833 314 ALNVPVIPLGTFLAAIHPFASS--PPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSG 391 (476)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 391 (476)
.+.. + .+...+...... ..++..++.........+.++.++.+...............+...+ .... .
T Consensus 154 ~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~ 223 (294)
T 1ehy_A 154 QFHQ---L--DMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRAN----IRPD-A 223 (294)
T ss_dssp HHTT---C--HHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHH----SSSS-C
T ss_pred EecC---c--chhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHH----Hhhh-h
Confidence 0000 0 000000000000 0011111111111223344444444332211111111111121111 0000 0
Q ss_pred cccccccCCCCcccEEEEeeCCCCcCC-HHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHH
Q 011833 392 TFFYKDHIGKTNVPVLALAADQDLICP-TEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFL 470 (476)
Q Consensus 392 ~~~~~~~l~~i~vPvLii~G~~D~~vp-~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL 470 (476)
.......+.++++|+|+|+|++|.++| .+..+.+.+.+++. +++++ +++||+.. .|.|+++.+.|.+||
T Consensus 224 ~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 224 ALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNY--TMETI-----EDCGHFLM---VEKPEIAIDRIKTAF 293 (294)
T ss_dssp CCCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBSSE--EEEEE-----TTCCSCHH---HHCHHHHHHHHHHHC
T ss_pred hhcCCcccCcCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCC--ceEEe-----CCCCCChh---hhCHHHHHHHHHHHh
Confidence 000012456899999999999999998 46778888888865 77777 89999544 788999999999997
Q ss_pred H
Q 011833 471 T 471 (476)
Q Consensus 471 ~ 471 (476)
+
T Consensus 294 ~ 294 (294)
T 1ehy_A 294 R 294 (294)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.94 E-value=8.1e-26 Score=215.90 Aligned_cols=249 Identities=16% Similarity=0.132 Sum_probs=154.3
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCC-cceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccccc
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTN-AIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEF 146 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~-~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~ 146 (476)
.++.+ +|.++++..+.+ .+++|||+||++++ ...| ..+++.|+++||+|+++|+||||.|.....
T Consensus 5 ~~~~~--~g~~l~~~~~g~------~~~~vvllHG~~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~- 70 (254)
T 2ocg_A 5 AKVAV--NGVQLHYQQTGE------GDHAVLLLPGMLGSGETDF-----GPQLKNLNKKLFTVVAWDPRGYGHSRPPDR- 70 (254)
T ss_dssp EEEEE--TTEEEEEEEEEC------CSEEEEEECCTTCCHHHHC-----HHHHHHSCTTTEEEEEECCTTSTTCCSSCC-
T ss_pred eEEEE--CCEEEEEEEecC------CCCeEEEECCCCCCCccch-----HHHHHHHhhCCCeEEEECCCCCCCCCCCCC-
Confidence 34544 899998877632 13689999999888 5667 478899999999999999999999965321
Q ss_pred CccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccC
Q 011833 147 GEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKND 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
.
T Consensus 71 -------------------------------------------------------------------------------~ 71 (254)
T 2ocg_A 71 -------------------------------------------------------------------------------D 71 (254)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------C
Confidence 1
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhh
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLL 306 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~ 306 (476)
|+.+.+. +|+..+++.+.+ .+. ++++++||||||.+++.+|.++| .+|+++|++++....... ....+.
T Consensus 72 ~~~~~~~-~~~~~~~~~l~~-l~~--~~~~l~GhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~--~~~~~~ 140 (254)
T 2ocg_A 72 FPADFFE-RDAKDAVDLMKA-LKF--KKVSLLGWSDGGITALIAAAKYP-----SYIHKMVIWGANAYVTDE--DSMIYE 140 (254)
T ss_dssp CCTTHHH-HHHHHHHHHHHH-TTC--SSEEEEEETHHHHHHHHHHHHCT-----TTEEEEEEESCCSBCCHH--HHHHHH
T ss_pred CChHHHH-HHHHHHHHHHHH-hCC--CCEEEEEECHhHHHHHHHHHHCh-----HHhhheeEeccccccChh--hHHHHH
Confidence 2311111 334444444433 233 48999999999999999999998 889999999875432211 000000
Q ss_pred cCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCc
Q 011833 307 PLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGL 386 (476)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (476)
. +.............+..... .+... .....|...+..- +
T Consensus 141 ~---------------------~~~~~~~~~~~~~~~~~~~~------~~~~~------------~~~~~~~~~~~~~-~ 180 (254)
T 2ocg_A 141 G---------------------IRDVSKWSERTRKPLEALYG------YDYFA------------RTCEKWVDGIRQF-K 180 (254)
T ss_dssp T---------------------TSCGGGSCHHHHHHHHHHHC------HHHHH------------HHHHHHHHHHHGG-G
T ss_pred H---------------------HHHHHHHHHHhHHHHHHHhc------chhhH------------HHHHHHHHHHHHH-H
Confidence 0 00000000000000000000 00000 0011121111100 0
Q ss_pred cccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHH
Q 011833 387 CDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCI 466 (476)
Q Consensus 387 ~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i 466 (476)
. ........+.+.++++|+|+|+|++|.++|++.++.+.+.+++. +++++ +++||..+ .+.|+++.+.|
T Consensus 181 ~-~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~e~p~~~~~~i 249 (254)
T 2ocg_A 181 H-LPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGS--RLHLM-----PEGKHNLH---LRFADEFNKLA 249 (254)
T ss_dssp G-SGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTC--EEEEE-----TTCCTTHH---HHTHHHHHHHH
T ss_pred h-ccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCCCC--EEEEc-----CCCCCchh---hhCHHHHHHHH
Confidence 0 00011123467889999999999999999999999999999875 67777 89999544 57789999999
Q ss_pred HHHHH
Q 011833 467 IEFLT 471 (476)
Q Consensus 467 ~~fL~ 471 (476)
.+||+
T Consensus 250 ~~fl~ 254 (254)
T 2ocg_A 250 EDFLQ 254 (254)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 99984
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.4e-26 Score=219.25 Aligned_cols=260 Identities=19% Similarity=0.248 Sum_probs=161.4
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.+|.++++..+. .+++|||+||++++...| ..+++.|+++||+|+++|+||||.|.....
T Consensus 9 ~~~g~~l~y~~~g-------~~~pvvllHG~~~~~~~~-----~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~------- 69 (279)
T 1hkh_A 9 NSTPIELYYEDQG-------SGQPVVLIHGYPLDGHSW-----ERQTRELLAQGYRVITYDRRGFGGSSKVNT------- 69 (279)
T ss_dssp TTEEEEEEEEEES-------SSEEEEEECCTTCCGGGG-----HHHHHHHHHTTEEEEEECCTTSTTSCCCSS-------
T ss_pred CCCCeEEEEEecC-------CCCcEEEEcCCCchhhHH-----hhhHHHHHhCCcEEEEeCCCCCCCCCCCCC-------
Confidence 4588888877662 246799999999999999 588999999999999999999999965321
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.|+++++
T Consensus 70 -------------------------------------------------------------------------~~~~~~~ 76 (279)
T 1hkh_A 70 -------------------------------------------------------------------------GYDYDTF 76 (279)
T ss_dssp -------------------------------------------------------------------------CCSHHHH
T ss_pred -------------------------------------------------------------------------CCCHHHH
Confidence 3566676
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcc-cccEEEEecccccccCChhhHHHhhcCcch
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDS-GFASVTTLASSLDYRPSNSLLRLLLPLSDP 311 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~-~v~~lvlla~~~~~~~~~~~~~~~~~~~~~ 311 (476)
+ +|+.++++.+ +. +++++|||||||.+++.+|.++| . +|+++|++++.......... .+
T Consensus 77 ~-~dl~~~l~~l----~~--~~~~lvGhS~Gg~va~~~a~~~p-----~~~v~~lvl~~~~~~~~~~~~~--------~~ 136 (279)
T 1hkh_A 77 A-ADLHTVLETL----DL--RDVVLVGFSMGTGELARYVARYG-----HERVAKLAFLASLEPFLVQRDD--------NP 136 (279)
T ss_dssp H-HHHHHHHHHH----TC--CSEEEEEETHHHHHHHHHHHHHC-----STTEEEEEEESCCCSBCBCBTT--------BT
T ss_pred H-HHHHHHHHhc----CC--CceEEEEeChhHHHHHHHHHHcC-----ccceeeEEEEccCCcccccCcC--------Cc
Confidence 6 7888888876 22 38999999999999999999988 5 89999999974321110000 00
Q ss_pred hhhccCCcCChHHHHHhhccCCC-C-chHHHHHHHHhhc----CCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC
Q 011833 312 IQALNVPVIPLGTFLAAIHPFAS-S-PPYVLSWLKFLIS----APDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG 385 (476)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (476)
..++.. .+..+..... . ......+...... ......++.+..+......... .........+ .
T Consensus 137 ------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-- 205 (279)
T 1hkh_A 137 ------EGVPQE-VFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAP-VAAYAVVPAW-I-- 205 (279)
T ss_dssp ------TSBCHH-HHHHHHHHHHHCHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCT-THHHHTHHHH-T--
T ss_pred ------CCCcHH-HHHHHHHHhhhhhhhhHHHHHhhhhhcccCCcccccHHHHHhhhhhhccCcH-HHHHHHHHHH-h--
Confidence 000000 0000000000 0 0000011111110 0111223332222211110111 0000000000 0
Q ss_pred ccccCCcccccccCCCC---cccEEEEeeCCCCcCCHHHH-HHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccc
Q 011833 386 LCDRSGTFFYKDHIGKT---NVPVLALAADQDLICPTEAV-YETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQ 461 (476)
Q Consensus 386 ~~~~~g~~~~~~~l~~i---~vPvLii~G~~D~~vp~~~~-~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~ 461 (476)
.+..+.+.++ ++|+|+|+|++|.++|++.+ +.+.+.+++. +++++ +++||..+ .+.|++
T Consensus 206 -------~~~~~~l~~i~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~ 268 (279)
T 1hkh_A 206 -------EDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEA--DYVEV-----EGAPHGLL---WTHADE 268 (279)
T ss_dssp -------CBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCTTS--EEEEE-----TTCCTTHH---HHTHHH
T ss_pred -------hchhhhHHHhccCCCCEEEEEcCCCccCChHHHHHHHHHhCCCe--eEEEe-----CCCCccch---hcCHHH
Confidence 1122346677 99999999999999999887 8899999875 67777 89999554 577899
Q ss_pred hhHHHHHHHHh
Q 011833 462 VYPCIIEFLTR 472 (476)
Q Consensus 462 v~~~i~~fL~~ 472 (476)
+.+.|.+||++
T Consensus 269 ~~~~i~~fl~~ 279 (279)
T 1hkh_A 269 VNAALKTFLAK 279 (279)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhhC
Confidence 99999999964
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-26 Score=220.33 Aligned_cols=239 Identities=14% Similarity=0.167 Sum_probs=164.8
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCC--cceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTN--AIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDS 150 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~--~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~ 150 (476)
+.+|.++.++.+.|... .+|+||++||++++ ...| ..++..|+++||.|+++|+||+|.|.....
T Consensus 28 ~~~g~~l~~~~~~p~~~---~~p~vv~~HG~~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~----- 94 (270)
T 3pfb_A 28 ERDGLQLVGTREEPFGE---IYDMAIIFHGFTANRNTSLL-----REIANSLRDENIASVRFDFNGHGDSDGKFE----- 94 (270)
T ss_dssp EETTEEEEEEEEECSSS---SEEEEEEECCTTCCTTCHHH-----HHHHHHHHHTTCEEEEECCTTSTTSSSCGG-----
T ss_pred ccCCEEEEEEEEcCCCC---CCCEEEEEcCCCCCccccHH-----HHHHHHHHhCCcEEEEEccccccCCCCCCC-----
Confidence 45999999999977532 46899999999987 4446 578999999999999999999999965321
Q ss_pred cccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCch
Q 011833 151 MITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFD 230 (476)
Q Consensus 151 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (476)
.++++
T Consensus 95 ---------------------------------------------------------------------------~~~~~ 99 (270)
T 3pfb_A 95 ---------------------------------------------------------------------------NMTVL 99 (270)
T ss_dssp ---------------------------------------------------------------------------GCCHH
T ss_pred ---------------------------------------------------------------------------ccCHH
Confidence 24555
Q ss_pred hhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcc
Q 011833 231 HYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSD 310 (476)
Q Consensus 231 ~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~ 310 (476)
+++ +|+.++++++++..+.+ +++++||||||.+++.++..+| .+|+++|++++........ ....
T Consensus 100 ~~~-~d~~~~i~~l~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~p-----~~v~~~v~~~~~~~~~~~~--~~~~----- 164 (270)
T 3pfb_A 100 NEI-EDANAILNYVKTDPHVR--NIYLVGHAQGGVVASMLAGLYP-----DLIKKVVLLAPAATLKGDA--LEGN----- 164 (270)
T ss_dssp HHH-HHHHHHHHHHHTCTTEE--EEEEEEETHHHHHHHHHHHHCT-----TTEEEEEEESCCTHHHHHH--HHTE-----
T ss_pred HHH-HhHHHHHHHHHhCcCCC--eEEEEEeCchhHHHHHHHHhCc-----hhhcEEEEeccccccchhh--hhhh-----
Confidence 555 89999999998765543 8999999999999999999987 7899999999876433210 0000
Q ss_pred hhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccC
Q 011833 311 PIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRS 390 (476)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (476)
........ ..+........ . ... . .+......
T Consensus 165 ------------------~~~~~~~~----~~~~~~~~~~~---~------------~~~-~---~~~~~~~~------- 196 (270)
T 3pfb_A 165 ------------------TQGVTYNP----DHIPDRLPFKD---L------------TLG-G---FYLRIAQQ------- 196 (270)
T ss_dssp ------------------ETTEECCT----TSCCSEEEETT---E------------EEE-H---HHHHHHHH-------
T ss_pred ------------------hhccccCc----ccccccccccc---c------------ccc-h---hHhhcccc-------
Confidence 00000000 00000000000 0 000 0 00000000
Q ss_pred CcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHH
Q 011833 391 GTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFL 470 (476)
Q Consensus 391 g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL 470 (476)
......+.++++|+|+++|++|.++|++.++++.+.+++. +++++ +++||... .+.++++.+.|.+||
T Consensus 197 --~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~~~~~~~~~~i~~fl 264 (270)
T 3pfb_A 197 --LPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQNS--TLHLI-----EGADHCFS---DSYQKNAVNLTTDFL 264 (270)
T ss_dssp --CCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCSSE--EEEEE-----TTCCTTCC---THHHHHHHHHHHHHH
T ss_pred --cCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhCCCC--eEEEc-----CCCCcccC---ccchHHHHHHHHHHH
Confidence 1122356788999999999999999999999999998864 77777 89999543 667899999999999
Q ss_pred Hhhc
Q 011833 471 TRHD 474 (476)
Q Consensus 471 ~~~~ 474 (476)
+++.
T Consensus 265 ~~~~ 268 (270)
T 3pfb_A 265 QNNN 268 (270)
T ss_dssp C---
T ss_pred hhcC
Confidence 8865
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-25 Score=217.23 Aligned_cols=264 Identities=15% Similarity=0.143 Sum_probs=161.4
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCc-EEEecCCC---CCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHP-LLLLSGIG---TNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~-VlllHG~~---~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~ 142 (476)
..++. .+|.++++..+.+ .+++ |||+||++ ++...| ..+++.|++. |+|+++|+||||.|..
T Consensus 9 ~~~~~--~~g~~l~y~~~g~------~g~p~vvllHG~~~~~~~~~~~-----~~~~~~L~~~-~~vi~~D~~G~G~S~~ 74 (285)
T 1c4x_A 9 EKRFP--SGTLASHALVAGD------PQSPAVVLLHGAGPGAHAASNW-----RPIIPDLAEN-FFVVAPDLIGFGQSEY 74 (285)
T ss_dssp EEEEC--CTTSCEEEEEESC------TTSCEEEEECCCSTTCCHHHHH-----GGGHHHHHTT-SEEEEECCTTSTTSCC
T ss_pred ceEEE--ECCEEEEEEecCC------CCCCEEEEEeCCCCCCcchhhH-----HHHHHHHhhC-cEEEEecCCCCCCCCC
Confidence 44454 4899998877632 1345 99999997 666678 5778888765 9999999999999965
Q ss_pred ccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLI 222 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (476)
...
T Consensus 75 ~~~----------------------------------------------------------------------------- 77 (285)
T 1c4x_A 75 PET----------------------------------------------------------------------------- 77 (285)
T ss_dssp CSS-----------------------------------------------------------------------------
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 321
Q ss_pred cccCCCchhh----hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCC
Q 011833 223 VKNDWDFDHY----LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPS 298 (476)
Q Consensus 223 ~~~~~~~~~~----~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~ 298 (476)
..++++++ + +|+.++++.+ +. +++++|||||||.+++.+|.++| ++|+++|++++.......
T Consensus 78 --~~~~~~~~~~~~~-~dl~~~l~~l----~~--~~~~lvGhS~Gg~va~~~a~~~p-----~~v~~lvl~~~~~~~~~~ 143 (285)
T 1c4x_A 78 --YPGHIMSWVGMRV-EQILGLMNHF----GI--EKSHIVGNSMGGAVTLQLVVEAP-----ERFDKVALMGSVGAPMNA 143 (285)
T ss_dssp --CCSSHHHHHHHHH-HHHHHHHHHH----TC--SSEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCSSCCSS
T ss_pred --cccchhhhhhhHH-HHHHHHHHHh----CC--CccEEEEEChHHHHHHHHHHhCh-----HHhheEEEeccCCCCCCc
Confidence 02455666 4 6666666654 33 38999999999999999999988 899999999986432111
Q ss_pred -hhhHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCC--CHHHHHHHhhhccCCCCHHHHH
Q 011833 299 -NSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMM--HPELFEKLIFSNFGNIPTKLIS 375 (476)
Q Consensus 299 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 375 (476)
......+... +.. .........+......+... .++......... .......
T Consensus 144 ~~~~~~~~~~~---------------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 198 (285)
T 1c4x_A 144 RPPELARLLAF---------------------YAD-PRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVA---NDPEVRR 198 (285)
T ss_dssp CCHHHHHHHTG---------------------GGS-CCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHH---HCHHHHH
T ss_pred cchhHHHHHHH---------------------hcc-ccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhc---cCHHHHH
Confidence 0001111000 000 00000111111111111111 122222211100 0111122
Q ss_pred HHHHHHH-hCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCccccccc
Q 011833 376 QLTTVFQ-EGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVG 454 (476)
Q Consensus 376 ~~~~~~~-~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~ 454 (476)
.+..++. ...... ......+.+.++++|+|+|+|++|.++|++.++.+.+.+++. +++++ +++||+.+
T Consensus 199 ~~~~~~~~~~~~~~--~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~-- 267 (285)
T 1c4x_A 199 IQEVMFESMKAGME--SLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHA--ELVVL-----DRCGHWAQ-- 267 (285)
T ss_dssp HHHHHHHHHSSCCG--GGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCSSE--EEEEE-----SSCCSCHH--
T ss_pred HHHHHhcccccccc--ccccchhhhccCCCCEEEEEeCCCeeeCHHHHHHHHHhCCCc--eEEEe-----CCCCcchh--
Confidence 2222220 001000 011122467889999999999999999999999999999865 67777 89999554
Q ss_pred ccCCccchhHHHHHHHHh
Q 011833 455 SRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 455 ~~~~~~~v~~~i~~fL~~ 472 (476)
.+.|+++.+.|.+||++
T Consensus 268 -~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 268 -LERWDAMGPMLMEHFRA 284 (285)
T ss_dssp -HHSHHHHHHHHHHHHHC
T ss_pred -hcCHHHHHHHHHHHHhc
Confidence 57789999999999975
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=217.58 Aligned_cols=281 Identities=12% Similarity=0.079 Sum_probs=170.0
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
+..++.+ +|..+.+..+. .+|+|||+||++++...| ..++..|+++ |+|+++|+||||.|.....
T Consensus 11 ~~~~~~~--~g~~l~~~~~g-------~~~~vv~lHG~~~~~~~~-----~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~ 75 (301)
T 3kda_A 11 ESAYREV--DGVKLHYVKGG-------QGPLVMLVHGFGQTWYEW-----HQLMPELAKR-FTVIAPDLPGLGQSEPPKT 75 (301)
T ss_dssp EEEEEEE--TTEEEEEEEEE-------SSSEEEEECCTTCCGGGG-----TTTHHHHTTT-SEEEEECCTTSTTCCCCSS
T ss_pred ceEEEee--CCeEEEEEEcC-------CCCEEEEECCCCcchhHH-----HHHHHHHHhc-CeEEEEcCCCCCCCCCCCC
Confidence 4455554 99999988873 358999999999999999 6889999888 9999999999999976421
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
T Consensus 76 -------------------------------------------------------------------------------- 75 (301)
T 3kda_A 76 -------------------------------------------------------------------------------- 75 (301)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCc-EeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHH-
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGK-LLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLR- 303 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~k-i~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~- 303 (476)
.+++++++ +|+.++++.+ +. ++ ++++||||||.+++.++.++| .+|+++|+++++...........
T Consensus 76 ~~~~~~~~-~~l~~~l~~l----~~--~~p~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~ 143 (301)
T 3kda_A 76 GYSGEQVA-VYLHKLARQF----SP--DRPFDLVAHDIGIWNTYPMVVKNQ-----ADIARLVYMEAPIPDARIYRFPAF 143 (301)
T ss_dssp CSSHHHHH-HHHHHHHHHH----CS--SSCEEEEEETHHHHTTHHHHHHCG-----GGEEEEEEESSCCSSGGGGGSBSE
T ss_pred CccHHHHH-HHHHHHHHHc----CC--CccEEEEEeCccHHHHHHHHHhCh-----hhccEEEEEccCCCCCCccchhhh
Confidence 35666666 7887777766 32 36 999999999999999999988 88999999998642211100000
Q ss_pred -H-hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHH
Q 011833 304 -L-LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVF 381 (476)
Q Consensus 304 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (476)
. .....+....... ...+...+... ....++..++...........++.++.+...............+...+
T Consensus 144 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (301)
T 3kda_A 144 TAQGESLVWHFSFFAA----DDRLAETLIAG-KERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRAL 218 (301)
T ss_dssp ETTEECSSTHHHHHHC----STTHHHHHHTT-CHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTH
T ss_pred cchhhhhhhhHHHhhc----CcchHHHHhcc-chHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhh
Confidence 0 0000000000000 00000000000 000111122222222222334444444332221100001111111110
Q ss_pred HhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccc
Q 011833 382 QEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQ 461 (476)
Q Consensus 382 ~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~ 461 (476)
...... .......+.++++|+|+|+|++| ++++..+.+.+.+++. +++++ +++||+.+ .+.|++
T Consensus 219 ~~~~~~----~~~~~~~l~~i~~P~l~i~G~~D--~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~ 282 (301)
T 3kda_A 219 NESVRQ----NAELAKTRLQMPTMTLAGGGAGG--MGTFQLEQMKAYAEDV--EGHVL-----PGCGHWLP---EECAAP 282 (301)
T ss_dssp HHHHHH----HHHHTTSCBCSCEEEEEECSTTS--CTTHHHHHHHTTBSSE--EEEEE-----TTCCSCHH---HHTHHH
T ss_pred ccchhh----cccchhhccccCcceEEEecCCC--CChhHHHHHHhhcccC--eEEEc-----CCCCcCch---hhCHHH
Confidence 000000 01112245589999999999999 7788888898888864 77777 89999554 788999
Q ss_pred hhHHHHHHHHhhc
Q 011833 462 VYPCIIEFLTRHD 474 (476)
Q Consensus 462 v~~~i~~fL~~~~ 474 (476)
+.+.|.+|+++..
T Consensus 283 ~~~~i~~~l~~~~ 295 (301)
T 3kda_A 283 MNRLVIDFLSRGR 295 (301)
T ss_dssp HHHHHHHHHTTSC
T ss_pred HHHHHHHHHhhCc
Confidence 9999999998864
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-25 Score=218.96 Aligned_cols=262 Identities=14% Similarity=0.157 Sum_probs=164.0
Q ss_pred eEeeCCCc-eEEEEEEEcCCCCCCCCCCcEEEecCCC---CCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccc
Q 011833 69 YVAVPNSD-WRLALWRYLPSPAAPQRNHPLLLLSGIG---TNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 69 ~v~~~~dG-~~L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
++. .+| .++++..+.. +.+|+|||+||++ ++...| ..++..|++. |+|+++|+||||.|++..
T Consensus 17 ~~~--~~g~~~l~y~~~G~-----g~~~~vvllHG~~pg~~~~~~w-----~~~~~~L~~~-~~via~Dl~G~G~S~~~~ 83 (291)
T 2wue_A 17 EVD--VDGPLKLHYHEAGV-----GNDQTVVLLHGGGPGAASWTNF-----SRNIAVLARH-FHVLAVDQPGYGHSDKRA 83 (291)
T ss_dssp EEE--SSSEEEEEEEEECT-----TCSSEEEEECCCCTTCCHHHHT-----TTTHHHHTTT-SEEEEECCTTSTTSCCCS
T ss_pred EEE--eCCcEEEEEEecCC-----CCCCcEEEECCCCCccchHHHH-----HHHHHHHHhc-CEEEEECCCCCCCCCCCC
Confidence 454 489 8998887632 2246999999997 777788 5788888765 999999999999997533
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
.
T Consensus 84 ~------------------------------------------------------------------------------- 84 (291)
T 2wue_A 84 E------------------------------------------------------------------------------- 84 (291)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCC-----h
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPS-----N 299 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~-----~ 299 (476)
..|++++++ +|+.++++.+ +. +++++|||||||.+++.+|.++| ++|+++|++++....... .
T Consensus 85 ~~~~~~~~a-~dl~~~l~~l----~~--~~~~lvGhS~Gg~ia~~~A~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~ 152 (291)
T 2wue_A 85 HGQFNRYAA-MALKGLFDQL----GL--GRVPLVGNALGGGTAVRFALDYP-----ARAGRLVLMGPGGLSINLFAPDPT 152 (291)
T ss_dssp CSSHHHHHH-HHHHHHHHHH----TC--CSEEEEEETHHHHHHHHHHHHST-----TTEEEEEEESCSSSCCCSSSCSSC
T ss_pred CCcCHHHHH-HHHHHHHHHh----CC--CCeEEEEEChhHHHHHHHHHhCh-----HhhcEEEEECCCCCCccccccccc
Confidence 025556666 7777777665 33 38999999999999999999998 899999999986431110 0
Q ss_pred hhHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHH
Q 011833 300 SLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTT 379 (476)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (476)
...+.+ ...+.. ........++......+....++.+....... ........+..
T Consensus 153 ~~~~~~--------------------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 207 (291)
T 2wue_A 153 EGVKRL--------------------SKFSVA--PTRENLEAFLRVMVYDKNLITPELVDQRFALA---STPESLTATRA 207 (291)
T ss_dssp HHHHHH--------------------HHHHHS--CCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHH---TSHHHHHHHHH
T ss_pred hhhHHH--------------------HHHhcc--CCHHHHHHHHHHhccCcccCCHHHHHHHHHHh---cCchHHHHHHH
Confidence 000100 000000 00001111111111111112233332222111 01111111111
Q ss_pred HHH-hC--CccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCccccccccc
Q 011833 380 VFQ-EG--GLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSR 456 (476)
Q Consensus 380 ~~~-~~--~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~ 456 (476)
... .. ... .....+.+.++++|+|+|+|++|.++|++.++++.+.+++. +++++ +++||..+ .
T Consensus 208 ~~~~~~~~~~~----~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~p~~--~~~~i-----~~~gH~~~---~ 273 (291)
T 2wue_A 208 MGKSFAGADFE----AGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTIPRA--QLHVF-----GQCGHWVQ---V 273 (291)
T ss_dssp HHHHHTSTTGG----GGCGGGTGGGCCSCEEEEEETTCSSSCGGGGHHHHHHSTTE--EEEEE-----SSCCSCHH---H
T ss_pred HHhhccccccc----cchhHHHHhhCCCCeEEEecCCCCCCCHHHHHHHHHHCCCC--eEEEe-----CCCCCChh---h
Confidence 110 00 000 01112567889999999999999999999999999999875 67777 89999544 6
Q ss_pred CCccchhHHHHHHHHhh
Q 011833 457 LAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 457 ~~~~~v~~~i~~fL~~~ 473 (476)
+.|+++.+.|.+||++.
T Consensus 274 e~p~~~~~~i~~fl~~~ 290 (291)
T 2wue_A 274 EKFDEFNKLTIEFLGGG 290 (291)
T ss_dssp HTHHHHHHHHHHHTTC-
T ss_pred hCHHHHHHHHHHHHhcc
Confidence 77899999999999753
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=212.18 Aligned_cols=275 Identities=12% Similarity=0.148 Sum_probs=166.0
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
+..++.+ +|.++.+.... .+|+|||+||++++...| ..+++.|++ ||+|+++|+||||.|.....
T Consensus 4 ~~~~~~~--~~~~~~y~~~g-------~~~~vv~~HG~~~~~~~~-----~~~~~~L~~-~~~vi~~d~~G~G~s~~~~~ 68 (278)
T 3oos_A 4 TTNIIKT--PRGKFEYFLKG-------EGPPLCVTHLYSEYNDNG-----NTFANPFTD-HYSVYLVNLKGCGNSDSAKN 68 (278)
T ss_dssp EEEEEEE--TTEEEEEEEEC-------SSSEEEECCSSEECCTTC-----CTTTGGGGG-TSEEEEECCTTSTTSCCCSS
T ss_pred ccCcEec--CCceEEEEecC-------CCCeEEEEcCCCcchHHH-----HHHHHHhhc-CceEEEEcCCCCCCCCCCCC
Confidence 4456665 78888877652 368999999999999899 578888887 99999999999999966431
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
. .
T Consensus 69 ~------------------------------------------------------------------------------~ 70 (278)
T 3oos_A 69 D------------------------------------------------------------------------------S 70 (278)
T ss_dssp G------------------------------------------------------------------------------G
T ss_pred c------------------------------------------------------------------------------c
Confidence 0 1
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHh
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLL 305 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~ 305 (476)
.+++++++ +|+.++++.+ +. ++++++||||||.+++.++.++| .+|+++|++++............ .
T Consensus 71 ~~~~~~~~-~~~~~~~~~l----~~--~~~~lvG~S~Gg~~a~~~a~~~p-----~~v~~~vl~~~~~~~~~~~~~~~-~ 137 (278)
T 3oos_A 71 EYSMTETI-KDLEAIREAL----YI--NKWGFAGHSAGGMLALVYATEAQ-----ESLTKIIVGGAAASKEYASHKDS-I 137 (278)
T ss_dssp GGSHHHHH-HHHHHHHHHT----TC--SCEEEEEETHHHHHHHHHHHHHG-----GGEEEEEEESCCSBGGGGGSTTS-T
T ss_pred cCcHHHHH-HHHHHHHHHh----CC--CeEEEEeecccHHHHHHHHHhCc-----hhhCeEEEecCccccccccccch-h
Confidence 24455555 6666666554 33 38999999999999999999987 88999999998765211100000 0
Q ss_pred hcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC
Q 011833 306 LPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG 385 (476)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (476)
...... ........+..+..... .......+..........+++.+..+......... .......+....
T Consensus 138 ~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 207 (278)
T 3oos_A 138 YCSKNV------KFNRIVSIMNALNDDST-VQEERKALSREWALMSFYSEEKLEEALKLPNSGKT---VGNRLNYFRQVE 207 (278)
T ss_dssp TSTTST------THHHHHHHHHHHTCTTS-CHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEE---CHHHHHHHHHTT
T ss_pred hhhhch------hHHHHHHHHHhhccccc-CchHHHHHHHHHhhcccCCcHHHHHHhhccccchh---HHHHHHHhhhcc
Confidence 000000 00000011111111000 00000111110000111234444443322211100 101111111111
Q ss_pred ccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHH
Q 011833 386 LCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPC 465 (476)
Q Consensus 386 ~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~ 465 (476)
+. ..+....+.++++|+|+++|++|.++|++.++++.+.+++. +++++ +++||..+ .+.++++.+.
T Consensus 208 ~~----~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~~~p~~~~~~ 273 (278)
T 3oos_A 208 YK----DYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPNA--TLTKF-----EESNHNPF---VEEIDKFNQF 273 (278)
T ss_dssp GG----GCBCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHSTTE--EEEEE-----TTCSSCHH---HHSHHHHHHH
T ss_pred cc----cccHHHHHhCCCCCEEEEEeccCCCCCHHHHHHHHhhCCCc--EEEEc-----CCcCCCcc---cccHHHHHHH
Confidence 11 12233467889999999999999999999999999999864 77777 89999554 5778999999
Q ss_pred HHHHH
Q 011833 466 IIEFL 470 (476)
Q Consensus 466 i~~fL 470 (476)
|.+||
T Consensus 274 i~~fl 278 (278)
T 3oos_A 274 VNDTL 278 (278)
T ss_dssp HHHTC
T ss_pred HHhhC
Confidence 99885
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-26 Score=225.31 Aligned_cols=270 Identities=16% Similarity=0.111 Sum_probs=162.6
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcc-eeecCCCCCHHHHHHhCCCcEEEecCCCCCCccc-cc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAI-GYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAH-RV 144 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~-~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~-~~ 144 (476)
..++. .+|.+++++.+.+. .+++|||+||++++.. .| ..++..|+ +||+|+++|+||||.|++ ..
T Consensus 5 ~~~~~--~~g~~l~~~~~G~~-----~~~~vvllHG~~~~~~~~w-----~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~ 71 (286)
T 2yys_A 5 IGYVP--VGEAELYVEDVGPV-----EGPALFVLHGGPGGNAYVL-----REGLQDYL-EGFRVVYFDQRGSGRSLELPQ 71 (286)
T ss_dssp EEEEE--CSSCEEEEEEESCT-----TSCEEEEECCTTTCCSHHH-----HHHHGGGC-TTSEEEEECCTTSTTSCCCCS
T ss_pred eeEEe--ECCEEEEEEeecCC-----CCCEEEEECCCCCcchhHH-----HHHHHHhc-CCCEEEEECCCCCCCCCCCcc
Confidence 34454 48999998887542 3589999999999999 89 47788884 689999999999999975 22
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
..
T Consensus 72 ~~------------------------------------------------------------------------------ 73 (286)
T 2yys_A 72 DP------------------------------------------------------------------------------ 73 (286)
T ss_dssp CG------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 10
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHH
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRL 304 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~ 304 (476)
..|++++++ +|+.++++.+ +. +++++|||||||.+++.+|.++| + |+++|++++...... ....
T Consensus 74 ~~~~~~~~a-~dl~~ll~~l----~~--~~~~lvGhS~Gg~ia~~~a~~~p-----~-v~~lvl~~~~~~~~~---~~~~ 137 (286)
T 2yys_A 74 RLFTVDALV-EDTLLLAEAL----GV--ERFGLLAHGFGAVVALEVLRRFP-----Q-AEGAILLAPWVNFPW---LAAR 137 (286)
T ss_dssp GGCCHHHHH-HHHHHHHHHT----TC--CSEEEEEETTHHHHHHHHHHHCT-----T-EEEEEEESCCCBHHH---HHHH
T ss_pred ccCcHHHHH-HHHHHHHHHh----CC--CcEEEEEeCHHHHHHHHHHHhCc-----c-hheEEEeCCccCcHH---HHHH
Confidence 026677777 7888888766 33 38999999999999999999998 7 999999998652211 0000
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhC
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEG 384 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (476)
+.... .. .+.......+...............+. ..........+.+..+.... ..+. ....+ .+ .
T Consensus 138 ~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~--~~--~ 203 (286)
T 2yys_A 138 LAEAA---GL--APLPDPEENLKEALKREEPKALFDRLM--FPTPRGRMAYEWLAEGAGIL--GSDA-PGLAF--LR--N 203 (286)
T ss_dssp HHHHT---TC--CCCSCHHHHHHHHHHHSCHHHHHHHHH--CSSHHHHHHHHHHHHHTTCC--CCSH-HHHHH--HH--T
T ss_pred HHHHh---cc--ccchhHHHHHHHHhccCChHHHHHhhh--ccCCccccChHHHHHHHhhc--cccc-cchhh--cc--c
Confidence 00000 00 000000000000000000000000000 00000000011111111000 0010 00111 11 1
Q ss_pred CccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhH
Q 011833 385 GLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 385 ~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
.+. ..+..+.+.++++|+|+|+|++|.++|++ ++++.+ +++. +++++ +++||+.+ .+.|+++.+
T Consensus 204 ~~~----~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~~~-~~~~--~~~~i-----~~~gH~~~---~e~p~~~~~ 267 (286)
T 2yys_A 204 GLW----RLDYTPYLTPERRPLYVLVGERDGTSYPY-AEEVAS-RLRA--PIRVL-----PEAGHYLW---IDAPEAFEE 267 (286)
T ss_dssp TGG----GCBCGGGCCCCSSCEEEEEETTCTTTTTT-HHHHHH-HHTC--CEEEE-----TTCCSSHH---HHCHHHHHH
T ss_pred ccc----cCChhhhhhhcCCCEEEEEeCCCCcCCHh-HHHHHh-CCCC--CEEEe-----CCCCCCcC---hhhHHHHHH
Confidence 111 12234568899999999999999999999 999999 8875 67777 89999544 677899999
Q ss_pred HHHHHHHhh
Q 011833 465 CIIEFLTRH 473 (476)
Q Consensus 465 ~i~~fL~~~ 473 (476)
.|.+||++.
T Consensus 268 ~i~~fl~~~ 276 (286)
T 2yys_A 268 AFKEALAAL 276 (286)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhh
Confidence 999999864
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-25 Score=217.30 Aligned_cols=252 Identities=17% Similarity=0.218 Sum_probs=152.6
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhh
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKS 173 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (476)
+++|||+||+++++..| ..+++.|++. |+|+++|+||||.|.+...
T Consensus 16 g~~vvllHG~~~~~~~~-----~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~---------------------------- 61 (269)
T 2xmz_A 16 NQVLVFLHGFLSDSRTY-----HNHIEKFTDN-YHVITIDLPGHGEDQSSMD---------------------------- 61 (269)
T ss_dssp SEEEEEECCTTCCGGGG-----TTTHHHHHTT-SEEEEECCTTSTTCCCCTT----------------------------
T ss_pred CCeEEEEcCCCCcHHHH-----HHHHHHHhhc-CeEEEecCCCCCCCCCCCC----------------------------
Confidence 46899999999999999 6788999875 9999999999999965321
Q ss_pred hHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCC
Q 011833 174 QLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDG 253 (476)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ 253 (476)
..|++++++ +|+.++++.+ +. +
T Consensus 62 ---------------------------------------------------~~~~~~~~~-~dl~~~l~~l----~~--~ 83 (269)
T 2xmz_A 62 ---------------------------------------------------ETWNFDYIT-TLLDRILDKY----KD--K 83 (269)
T ss_dssp ---------------------------------------------------SCCCHHHHH-HHHHHHHGGG----TT--S
T ss_pred ---------------------------------------------------CccCHHHHH-HHHHHHHHHc----CC--C
Confidence 025666766 7777777654 33 3
Q ss_pred cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccCC
Q 011833 254 KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFA 333 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (476)
++++|||||||.+++.+|.++| ++|+++|++++................ ...+...+.. .
T Consensus 84 ~~~lvGhS~Gg~va~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~-~ 143 (269)
T 2xmz_A 84 SITLFGYSMGGRVALYYAINGH-----IPISNLILESTSPGIKEEANQLERRLV--------------DDARAKVLDI-A 143 (269)
T ss_dssp EEEEEEETHHHHHHHHHHHHCS-----SCCSEEEEESCCSCCSSHHHHHHHHHH--------------HHHHHHHHHH-H
T ss_pred cEEEEEECchHHHHHHHHHhCc-----hheeeeEEEcCCcccCCchhHHHHhhh--------------hhHHHHhhcc-c
Confidence 8999999999999999999988 889999999976543321111000000 0000000000 0
Q ss_pred CCchHHHHHHHH-hhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeC
Q 011833 334 SSPPYVLSWLKF-LISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAAD 412 (476)
Q Consensus 334 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~ 412 (476)
....++..|... .+......+++..+.+........+ .........+... ....+.+.+.++++|+|+|+|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~l~~i~~P~lii~G~ 216 (269)
T 2xmz_A 144 GIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSP-HKMAKALRDYGTG------QMPNLWPRLKEIKVPTLILAGE 216 (269)
T ss_dssp CHHHHHHHHTTSGGGGGGGGSCHHHHHHHHHHHHTSCH-HHHHHHHHHHSTT------TSCCCGGGGGGCCSCEEEEEET
T ss_pred cHHHHHHHHHhCccccccccCCHHHHHHHHHHHhccCc-HHHHHHHHHHHhc------cCccHHHHHHhcCCCEEEEEeC
Confidence 000000011000 0000000122222222111111111 1111111111000 0122334678899999999999
Q ss_pred CCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhcC
Q 011833 413 QDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHDM 475 (476)
Q Consensus 413 ~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~~ 475 (476)
+|.++|++..+ +.+.+++. +++++ +++||..+ .+.|+++.+.|.+||++..+
T Consensus 217 ~D~~~~~~~~~-~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~~~~~i~~fl~~~~~ 268 (269)
T 2xmz_A 217 YDEKFVQIAKK-MANLIPNS--KCKLI-----SATGHTIH---VEDSDEFDTMILGFLKEEQN 268 (269)
T ss_dssp TCHHHHHHHHH-HHHHSTTE--EEEEE-----TTCCSCHH---HHSHHHHHHHHHHHHHHHCC
T ss_pred CCcccCHHHHH-HHhhCCCc--EEEEe-----CCCCCChh---hcCHHHHHHHHHHHHHHhcC
Confidence 99999888755 88888864 77777 89999554 57789999999999987643
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.8e-26 Score=226.80 Aligned_cols=273 Identities=11% Similarity=0.033 Sum_probs=164.5
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccC
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
.++.+ +|.++++..+.+ +.+++|||+||++++...| ..++..|++. |+|+++|+||||.|++...
T Consensus 10 ~~~~~--~g~~l~y~~~G~-----g~~~pvvllHG~~~~~~~w-----~~~~~~L~~~-~~via~Dl~G~G~S~~~~~-- 74 (316)
T 3afi_E 10 RRAPV--LGSSMAYRETGA-----QDAPVVLFLHGNPTSSHIW-----RNILPLVSPV-AHCIAPDLIGFGQSGKPDI-- 74 (316)
T ss_dssp CEEEE--TTEEEEEEEESC-----TTSCEEEEECCTTCCGGGG-----TTTHHHHTTT-SEEEEECCTTSTTSCCCSS--
T ss_pred eeEEe--CCEEEEEEEeCC-----CCCCeEEEECCCCCchHHH-----HHHHHHHhhC-CEEEEECCCCCCCCCCCCC--
Confidence 34554 899998887642 1235999999999999999 6888889764 9999999999999965321
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
.|
T Consensus 75 ------------------------------------------------------------------------------~~ 76 (316)
T 3afi_E 75 ------------------------------------------------------------------------------AY 76 (316)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ------------------------------------------------------------------------------CC
Confidence 36
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc---cCCh-----
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY---RPSN----- 299 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~---~~~~----- 299 (476)
++++++ +|+.++++.+ +. +++++|||||||.+++.+|.++| ++|+++|++++.... ....
T Consensus 77 ~~~~~a-~dl~~ll~~l----~~--~~~~lvGhS~Gg~va~~~A~~~P-----~~v~~lvl~~~~~~~~~~~~~~~~~~~ 144 (316)
T 3afi_E 77 RFFDHV-RYLDAFIEQR----GV--TSAYLVAQDWGTALAFHLAARRP-----DFVRGLAFMEFIRPMPTWQDFHHTEVA 144 (316)
T ss_dssp CHHHHH-HHHHHHHHHT----TC--CSEEEEEEEHHHHHHHHHHHHCT-----TTEEEEEEEEECCCBSSGGGTTCCCCG
T ss_pred CHHHHH-HHHHHHHHHc----CC--CCEEEEEeCccHHHHHHHHHHCH-----HhhhheeeeccCCCcchhhhccchhhc
Confidence 777777 7888877765 33 38999999999999999999998 899999999873211 1000
Q ss_pred ------hhHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHH
Q 011833 300 ------SLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKL 373 (476)
Q Consensus 300 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (476)
...+... ..+..+.. .... .. ....+...++.. .....+..+.++.+............
T Consensus 145 ~~~~~~~~~~~~~------~~~~~~~~--~~~~---~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (316)
T 3afi_E 145 EEQDHAEAARAVF------RKFRTPGE--GEAM---IL--EANAFVERVLPG--GIVRKLGDEEMAPYRTPFPTPESRRP 209 (316)
T ss_dssp GGHHHHHHHHHHH------HHHTSTTH--HHHH---HT--TSCHHHHTTTGG--GCSSCCCHHHHHHHHTTCCSTGGGHH
T ss_pred cccccchhHHHHH------HHhcCCch--hhHH---Hh--ccchHHHHhccc--ccCCCCCHHHHHHHHhhcCCccchhH
Confidence 0000000 00000000 0000 00 000000000000 00112233333333211100000000
Q ss_pred HHHHHHHHHhCCcccc-----CCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCc
Q 011833 374 ISQLTTVFQEGGLCDR-----SGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYA 448 (476)
Q Consensus 374 ~~~~~~~~~~~~~~~~-----~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~g 448 (476)
+. .+......... .....+.+.+.++++|||+|+|++|.++|++..+.+.+.+++. +++++ +++|
T Consensus 210 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~--~~~~i-----~~~G 279 (316)
T 3afi_E 210 VL---AFPRELPIAGEPADVYEALQSAHAALAASSYPKLLFTGEPGALVSPEFAERFAASLTRC--ALIRL-----GAGL 279 (316)
T ss_dssp HH---HTGGGSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSSSE--EEEEE-----EEEC
T ss_pred HH---HHHHhccccccchhhhhHHHHHHHhhhccCCCeEEEecCCCCccCHHHHHHHHHhCCCC--eEEEc-----CCCC
Confidence 11 10000000000 0000112346679999999999999999999999999999975 67777 8999
Q ss_pred ccccccccCCccchhHHHHHHHHhh
Q 011833 449 HYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 449 H~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
|+.. .|.|+++.+.|.+||++.
T Consensus 280 H~~~---~e~p~~~~~~i~~fl~~~ 301 (316)
T 3afi_E 280 HYLQ---EDHADAIGRSVAGWIAGI 301 (316)
T ss_dssp SCHH---HHHHHHHHHHHHHHHHHH
T ss_pred CCch---hhCHHHHHHHHHHHHhhc
Confidence 9544 678999999999999865
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-25 Score=216.57 Aligned_cols=247 Identities=14% Similarity=0.187 Sum_probs=152.2
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
.+|+|||+||++++...| ..++..|++ +|+|+++|+||||.|.+...
T Consensus 14 ~~~~vvllHG~~~~~~~w-----~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~--------------------------- 60 (268)
T 3v48_A 14 DAPVVVLISGLGGSGSYW-----LPQLAVLEQ-EYQVVCYDQRGTGNNPDTLA--------------------------- 60 (268)
T ss_dssp TCCEEEEECCTTCCGGGG-----HHHHHHHHT-TSEEEECCCTTBTTBCCCCC---------------------------
T ss_pred CCCEEEEeCCCCccHHHH-----HHHHHHHhh-cCeEEEECCCCCCCCCCCcc---------------------------
Confidence 478999999999999999 578888865 69999999999999965321
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
..|++++++ +|+.++++.+ +.
T Consensus 61 ----------------------------------------------------~~~~~~~~a-~dl~~~l~~l----~~-- 81 (268)
T 3v48_A 61 ----------------------------------------------------EDYSIAQMA-AELHQALVAA----GI-- 81 (268)
T ss_dssp ----------------------------------------------------TTCCHHHHH-HHHHHHHHHT----TC--
T ss_pred ----------------------------------------------------ccCCHHHHH-HHHHHHHHHc----CC--
Confidence 135667766 7777776654 33
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccC
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPF 332 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (476)
+++++|||||||.+++.++.++| .+|+++|++++........ ...+.. . ...+.. .....+.......
T Consensus 82 ~~~~lvGhS~GG~ia~~~A~~~p-----~~v~~lvl~~~~~~~~~~~--~~~~~~-~--~~~~~~--~~~~~~~~~~~~~ 149 (268)
T 3v48_A 82 EHYAVVGHALGALVGMQLALDYP-----ASVTVLISVNGWLRINAHT--RRCFQV-R--ERLLYS--GGAQAWVEAQPLF 149 (268)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCT-----TTEEEEEEESCCSBCCHHH--HHHHHH-H--HHHHHH--HHHHHHHHHHHHH
T ss_pred CCeEEEEecHHHHHHHHHHHhCh-----hhceEEEEeccccccchhh--hHHHHH-H--HHHHhc--cchhhhhhhhhhh
Confidence 38999999999999999999998 8999999998754322110 000000 0 000000 0000000000000
Q ss_pred CCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeC
Q 011833 333 ASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAAD 412 (476)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~ 412 (476)
... ..|+..... ....+..... .. ......+......+.. .++.+.+.++++|||+|+|+
T Consensus 150 ~~~----~~~~~~~~~---~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~---------~d~~~~l~~i~~P~Lii~G~ 209 (268)
T 3v48_A 150 LYP----ADWMAARAP---RLEAEDALAL--AH--FQGKNNLLRRLNALKR---------ADFSHHADRIRCPVQIICAS 209 (268)
T ss_dssp HSC----HHHHHTTHH---HHHHHHHHHH--HT--CCCHHHHHHHHHHHHH---------CBCTTTGGGCCSCEEEEEET
T ss_pred cCc----hhhhhcccc---cchhhHHHHH--hh--cCchhHHHHHHHHHhc---------cchhhhhhcCCCCeEEEEeC
Confidence 000 001000000 0000000000 00 0011111111111111 22235688999999999999
Q ss_pred CCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 413 QDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 413 ~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
+|.++|++.++++.+.+++. +++++ +++||+. ..+.|+++.+.|.+||++.
T Consensus 210 ~D~~~p~~~~~~l~~~~p~~--~~~~~-----~~~GH~~---~~e~p~~~~~~i~~fl~~~ 260 (268)
T 3v48_A 210 DDLLVPTACSSELHAALPDS--QKMVM-----PYGGHAC---NVTDPETFNALLLNGLASL 260 (268)
T ss_dssp TCSSSCTHHHHHHHHHCSSE--EEEEE-----SSCCTTH---HHHCHHHHHHHHHHHHHHH
T ss_pred CCcccCHHHHHHHHHhCCcC--eEEEe-----CCCCcch---hhcCHHHHHHHHHHHHHHh
Confidence 99999999999999999976 66776 8999954 4788999999999999864
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.93 E-value=9.7e-25 Score=212.13 Aligned_cols=268 Identities=14% Similarity=0.167 Sum_probs=159.0
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccccc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEF 146 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~ 146 (476)
..++.+ +|.++++..+.++ .++++|||+||++++...|. .....++++||+|+++|+||||.|++...
T Consensus 7 ~~~~~~--~g~~l~~~~~g~~----~~~~~vvllHG~~~~~~~~~-----~~~~~l~~~g~~vi~~D~~G~G~S~~~~~- 74 (293)
T 1mtz_A 7 ENYAKV--NGIYIYYKLCKAP----EEKAKLMTMHGGPGMSHDYL-----LSLRDMTKEGITVLFYDQFGCGRSEEPDQ- 74 (293)
T ss_dssp EEEEEE--TTEEEEEEEECCS----SCSEEEEEECCTTTCCSGGG-----GGGGGGGGGTEEEEEECCTTSTTSCCCCG-
T ss_pred ceEEEE--CCEEEEEEEECCC----CCCCeEEEEeCCCCcchhHH-----HHHHHHHhcCcEEEEecCCCCccCCCCCC-
Confidence 445654 8999988877432 12378999999866555542 33445567899999999999999965321
Q ss_pred CccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccC
Q 011833 147 GEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKND 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
..
T Consensus 75 ------------------------------------------------------------------------------~~ 76 (293)
T 1mtz_A 75 ------------------------------------------------------------------------------SK 76 (293)
T ss_dssp ------------------------------------------------------------------------------GG
T ss_pred ------------------------------------------------------------------------------Cc
Confidence 02
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhh
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLL 306 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~ 306 (476)
|++++++ +|+.++++.+. +.+ +++++||||||.+++.+|.++| ++|+++|++++.............+.
T Consensus 77 ~~~~~~~-~dl~~~~~~l~---~~~--~~~lvGhS~Gg~va~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~ 145 (293)
T 1mtz_A 77 FTIDYGV-EEAEALRSKLF---GNE--KVFLMGSSYGGALALAYAVKYQ-----DHLKGLIVSGGLSSVPLTVKEMNRLI 145 (293)
T ss_dssp CSHHHHH-HHHHHHHHHHH---TTC--CEEEEEETHHHHHHHHHHHHHG-----GGEEEEEEESCCSBHHHHHHHHHHHH
T ss_pred ccHHHHH-HHHHHHHHHhc---CCC--cEEEEEecHHHHHHHHHHHhCc-----hhhheEEecCCccChHHHHHHHHHHH
Confidence 5666666 78888877662 223 8999999999999999999988 88999999998654211100000000
Q ss_pred cCcchhhhccCCcCChH--HHHHhhc--cCCCCchHH---HHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHH-
Q 011833 307 PLSDPIQALNVPVIPLG--TFLAAIH--PFASSPPYV---LSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLT- 378 (476)
Q Consensus 307 ~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 378 (476)
.. ++.. ..+.... .......+. ..+........ ...+......+.
T Consensus 146 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~ 198 (293)
T 1mtz_A 146 DE-----------LPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRS----------------EDWPPEVLKSLEY 198 (293)
T ss_dssp HT-----------SCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCS----------------SCCCHHHHHHHHH
T ss_pred Hh-----------cCHHHHHHHHHhhccCCcChHHHHHHHHHHHHhhcccc----------------cCchHHHHHhHhh
Confidence 00 0000 0000000 000000000 00000000000 011111111110
Q ss_pred --------HHHHhCCcccc--CCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCc
Q 011833 379 --------TVFQEGGLCDR--SGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYA 448 (476)
Q Consensus 379 --------~~~~~~~~~~~--~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~g 448 (476)
.+.....+... ....+..+.+.++++|+|+|+|++| .++++.++++.+.+++. +++++ +++|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D-~~~~~~~~~~~~~~~~~--~~~~~-----~~~g 270 (293)
T 1mtz_A 199 AERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYD-EVTPNVARVIHEKIAGS--ELHVF-----RDCS 270 (293)
T ss_dssp HHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEEETTC-SSCHHHHHHHHHHSTTC--EEEEE-----TTCC
T ss_pred hccchhhhhccCcceecccccccCCChhhhhccCCCCEEEEeeCCC-CCCHHHHHHHHHhCCCc--eEEEe-----CCCC
Confidence 00000000000 0112234567889999999999999 77888899999999865 77777 8999
Q ss_pred ccccccccCCccchhHHHHHHHHhh
Q 011833 449 HYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 449 H~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
|..+ .+.++++.+.|.+||+++
T Consensus 271 H~~~---~e~p~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 271 HLTM---WEDREGYNKLLSDFILKH 292 (293)
T ss_dssp SCHH---HHSHHHHHHHHHHHHHTC
T ss_pred CCcc---ccCHHHHHHHHHHHHHhc
Confidence 9654 567899999999999864
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.8e-25 Score=213.01 Aligned_cols=283 Identities=13% Similarity=0.105 Sum_probs=173.2
Q ss_pred CceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccc
Q 011833 65 DELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 65 ~e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
.+.+++.+ +|.++.+..+.+. .+|+|||+||++++...| ..++..|+ +||+|+++|+||||.|....
T Consensus 10 ~~~~~~~~--~g~~l~~~~~g~~-----~~~~vl~lHG~~~~~~~~-----~~~~~~l~-~~~~v~~~d~~G~G~s~~~~ 76 (299)
T 3g9x_A 10 FDPHYVEV--LGERMHYVDVGPR-----DGTPVLFLHGNPTSSYLW-----RNIIPHVA-PSHRCIAPDLIGMGKSDKPD 76 (299)
T ss_dssp CCCEEEEE--TTEEEEEEEESCS-----SSCCEEEECCTTCCGGGG-----TTTHHHHT-TTSCEEEECCTTSTTSCCCC
T ss_pred cceeeeee--CCeEEEEEecCCC-----CCCEEEEECCCCccHHHH-----HHHHHHHc-cCCEEEeeCCCCCCCCCCCC
Confidence 34566665 9999998887432 368999999999999999 57888885 59999999999999996533
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
.
T Consensus 77 ~------------------------------------------------------------------------------- 77 (299)
T 3g9x_A 77 L------------------------------------------------------------------------------- 77 (299)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHH
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRL 304 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~ 304 (476)
.+++++++ +|+.++++.+ +. ++++++||||||.+++.++.++| .+|+++|++++.............
T Consensus 78 -~~~~~~~~-~~~~~~~~~~----~~--~~~~lvG~S~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~ 144 (299)
T 3g9x_A 78 -DYFFDDHV-RYLDAFIEAL----GL--EEVVLVIHDWGSALGFHWAKRNP-----ERVKGIACMEFIRPFPTWDEWPEF 144 (299)
T ss_dssp -CCCHHHHH-HHHHHHHHHT----TC--CSEEEEEEHHHHHHHHHHHHHSG-----GGEEEEEEEEECCCBSSGGGSCGG
T ss_pred -cccHHHHH-HHHHHHHHHh----CC--CcEEEEEeCccHHHHHHHHHhcc-----hheeEEEEecCCcchhhhhhcchH
Confidence 25566666 6777777665 33 38999999999999999999987 889999999955433311100000
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhC
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEG 384 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (476)
... ....+..+. +...... ....+....+... ......++.+..+...............+.......
T Consensus 145 ~~~---~~~~~~~~~-----~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (299)
T 3g9x_A 145 ARE---TFQAFRTAD-----VGRELII--DQNAFIEGALPKC--VVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIA 212 (299)
T ss_dssp GHH---HHHHHTSSS-----HHHHHHT--TSCHHHHTHHHHT--CSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBT
T ss_pred HHH---HHHHHcCCC-----cchhhhc--cchhhHHHhhhhh--hccCCCHHHHHHHHHHhccccccchhhhhhhhhhhc
Confidence 000 000000000 0000000 0011111111111 112334444444433222111112222221111000
Q ss_pred Cc-cccC-CcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccch
Q 011833 385 GL-CDRS-GTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQV 462 (476)
Q Consensus 385 ~~-~~~~-g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v 462 (476)
.. .... ....+...+.++++|+|+|+|++|.++|++.++.+.+.+++. +++++ +++||+.+ .+.|+++
T Consensus 213 ~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~e~p~~~ 282 (299)
T 3g9x_A 213 GEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNC--KTVDI-----GPGLHYLQ---EDNPDLI 282 (299)
T ss_dssp TBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTTE--EEEEE-----EEESSCHH---HHCHHHH
T ss_pred cccchhhhhhhhhhhhcccCCCCeEEEecCCCCCCCHHHHHHHHhhCCCC--eEEEe-----CCCCCcch---hcCHHHH
Confidence 00 0000 001122346789999999999999999999999999999874 67776 89999554 6889999
Q ss_pred hHHHHHHHHhhc
Q 011833 463 YPCIIEFLTRHD 474 (476)
Q Consensus 463 ~~~i~~fL~~~~ 474 (476)
.+.|.+|+.+..
T Consensus 283 ~~~i~~~~~~~~ 294 (299)
T 3g9x_A 283 GSEIARWLPALH 294 (299)
T ss_dssp HHHHHHHSGGGC
T ss_pred HHHHHHHHhhhh
Confidence 999999998754
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.5e-25 Score=214.29 Aligned_cols=123 Identities=23% Similarity=0.345 Sum_probs=98.7
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccC
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
.++. +.+|.++++..+.+.. .+++|||+||++++...| ..++..|++ ||+|+++|+||||.|++....
T Consensus 8 ~~~~-~~~g~~l~~~~~g~~~----~~~~vvllHG~~~~~~~~-----~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~- 75 (285)
T 3bwx_A 8 RYWT-SSDGLRLHFRAYEGDI----SRPPVLCLPGLTRNARDF-----EDLATRLAG-DWRVLCPEMRGRGDSDYAKDP- 75 (285)
T ss_dssp EEEE-CTTSCEEEEEEECBCT----TSCCEEEECCTTCCGGGG-----HHHHHHHBB-TBCEEEECCTTBTTSCCCSSG-
T ss_pred Ceee-cCCCceEEEEEcCCCC----CCCcEEEECCCCcchhhH-----HHHHHHhhc-CCEEEeecCCCCCCCCCCCCc-
Confidence 3444 5799999998885432 268999999999999999 578888976 899999999999999653210
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
..|
T Consensus 76 -----------------------------------------------------------------------------~~~ 78 (285)
T 3bwx_A 76 -----------------------------------------------------------------------------MTY 78 (285)
T ss_dssp -----------------------------------------------------------------------------GGC
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 135
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLAS 291 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~ 291 (476)
++++++ +|+.++++.+ +. +++++|||||||.+++.+|.++| ++|+++|++++
T Consensus 79 ~~~~~a-~dl~~~l~~l----~~--~~~~lvGhS~Gg~va~~~a~~~p-----~~v~~lvl~~~ 130 (285)
T 3bwx_A 79 QPMQYL-QDLEALLAQE----GI--ERFVAIGTSLGGLLTMLLAAANP-----ARIAAAVLNDV 130 (285)
T ss_dssp SHHHHH-HHHHHHHHHH----TC--CSEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESC
T ss_pred CHHHHH-HHHHHHHHhc----CC--CceEEEEeCHHHHHHHHHHHhCc-----hheeEEEEecC
Confidence 666666 7888888766 22 38999999999999999999998 89999999864
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-24 Score=210.68 Aligned_cols=265 Identities=14% Similarity=0.154 Sum_probs=161.3
Q ss_pred eeeEeeCCCc--eEEEEEEEcCCCCCCCCCCcEEEecCCC---CCcceeecCCCCCHH-HHHHhCCCcEEEecCCCCCCc
Q 011833 67 LHYVAVPNSD--WRLALWRYLPSPAAPQRNHPLLLLSGIG---TNAIGYDLSPEYSFA-RYMSGQGFDTWILEVRGAGLS 140 (476)
Q Consensus 67 ~~~v~~~~dG--~~L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~-~~L~~~Gy~V~~~D~rG~G~S 140 (476)
..++.+..+| .++++..+.. ..++|||+||++ ++...| ..++ ..|++. |+|+++|+||||.|
T Consensus 13 ~~~~~~~~~g~~~~l~y~~~g~------g~~~vvllHG~~~~~~~~~~~-----~~~~~~~l~~~-~~vi~~D~~G~G~S 80 (289)
T 1u2e_A 13 SRFLNVEEAGKTLRIHFNDCGQ------GDETVVLLHGSGPGATGWANF-----SRNIDPLVEAG-YRVILLDCPGWGKS 80 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEECC------CSSEEEEECCCSTTCCHHHHT-----TTTHHHHHHTT-CEEEEECCTTSTTS
T ss_pred ceEEEEcCCCcEEEEEEeccCC------CCceEEEECCCCcccchhHHH-----HHhhhHHHhcC-CeEEEEcCCCCCCC
Confidence 4466652238 8888776521 123899999997 556667 4666 778765 99999999999999
Q ss_pred ccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhh
Q 011833 141 AHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLD 220 (476)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (476)
++...
T Consensus 81 ~~~~~--------------------------------------------------------------------------- 85 (289)
T 1u2e_A 81 DSVVN--------------------------------------------------------------------------- 85 (289)
T ss_dssp CCCCC---------------------------------------------------------------------------
T ss_pred CCCCc---------------------------------------------------------------------------
Confidence 65321
Q ss_pred cccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCCh-
Q 011833 221 LIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSN- 299 (476)
Q Consensus 221 ~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~- 299 (476)
..+++++++ +|+.++++.+ +. +++++|||||||.+++.+|.++| ++|+++|++++........
T Consensus 86 ----~~~~~~~~~-~~l~~~l~~l----~~--~~~~lvGhS~GG~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~ 149 (289)
T 1u2e_A 86 ----SGSRSDLNA-RILKSVVDQL----DI--AKIHLLGNSMGGHSSVAFTLKWP-----ERVGKLVLMGGGTGGMSLFT 149 (289)
T ss_dssp ----SSCHHHHHH-HHHHHHHHHT----TC--CCEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCSCCCCCSSS
T ss_pred ----cccCHHHHH-HHHHHHHHHh----CC--CceEEEEECHhHHHHHHHHHHCH-----HhhhEEEEECCCcccccccc
Confidence 013444444 5666665543 33 38999999999999999999988 8999999999764311100
Q ss_pred ----hhHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHH
Q 011833 300 ----SLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLIS 375 (476)
Q Consensus 300 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (476)
...+.+ .... .. ........++...........++......... ......+.
T Consensus 150 ~~~~~~~~~~--------------------~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 205 (289)
T 1u2e_A 150 PMPTEGIKRL--------------------NQLY-RQ-PTIENLKLMMDIFVFDTSDLTDALFEARLNNM--LSRRDHLE 205 (289)
T ss_dssp CSSCHHHHHH--------------------HHHH-HS-CCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHH--HHTHHHHH
T ss_pred ccchhhHHHH--------------------HHHH-hc-chHHHHHHHHHHhhcCcccCCHHHHHHHHHHh--hcChhHHH
Confidence 000000 0000 00 00001111111111112222233332221100 00111222
Q ss_pred HHHHHHHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccc
Q 011833 376 QLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGS 455 (476)
Q Consensus 376 ~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~ 455 (476)
.+...+..... ...+....+.++++|+|+|+|++|.++|++.++++.+.+++. +++++ +++||+.+
T Consensus 206 ~~~~~~~~~~~----~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~--- 271 (289)
T 1u2e_A 206 NFVKSLEANPK----QFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGS--ELHIF-----RDCGHWAQ--- 271 (289)
T ss_dssp HHHHHHHHCSC----CSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSTTC--EEEEE-----SSCCSCHH---
T ss_pred HHHHHHHhccc----cccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhCCCc--EEEEe-----CCCCCchh---
Confidence 22222211110 112233567889999999999999999999999999999875 67777 89999554
Q ss_pred cCCccchhHHHHHHHHh
Q 011833 456 RLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 456 ~~~~~~v~~~i~~fL~~ 472 (476)
.+.++++.+.|.+||++
T Consensus 272 ~e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 272 WEHADAFNQLVLNFLAR 288 (289)
T ss_dssp HHTHHHHHHHHHHHHTC
T ss_pred hcCHHHHHHHHHHHhcC
Confidence 57789999999999974
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.5e-25 Score=211.74 Aligned_cols=233 Identities=15% Similarity=0.229 Sum_probs=147.9
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
.+++|||+||++++...| ..++..|++. |+|+++|+||||.|.+..
T Consensus 15 ~~~~vvllHG~~~~~~~w-----~~~~~~L~~~-~~via~Dl~G~G~S~~~~---------------------------- 60 (255)
T 3bf7_A 15 NNSPIVLVHGLFGSLDNL-----GVLARDLVND-HNIIQVDVRNHGLSPREP---------------------------- 60 (255)
T ss_dssp CCCCEEEECCTTCCTTTT-----HHHHHHHTTT-SCEEEECCTTSTTSCCCS----------------------------
T ss_pred CCCCEEEEcCCcccHhHH-----HHHHHHHHhh-CcEEEecCCCCCCCCCCC----------------------------
Confidence 468999999999999999 5788888765 999999999999996522
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
.+++++++ +|+.++++.+ +.
T Consensus 61 -----------------------------------------------------~~~~~~~a-~dl~~~l~~l----~~-- 80 (255)
T 3bf7_A 61 -----------------------------------------------------VMNYPAMA-QDLVDTLDAL----QI-- 80 (255)
T ss_dssp -----------------------------------------------------CCCHHHHH-HHHHHHHHHH----TC--
T ss_pred -----------------------------------------------------CcCHHHHH-HHHHHHHHHc----CC--
Confidence 24566666 7888887765 22
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc-ccccCC--hhhHHHhhcCcchhhhccCCcCChHHHHHhh
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS-LDYRPS--NSLLRLLLPLSDPIQALNVPVIPLGTFLAAI 329 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (476)
+++++|||||||.+++.+|.++| ++|+++|++++. ...... ......+.. ..
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~~p-----~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~--------------------~~ 135 (255)
T 3bf7_A 81 DKATFIGHSMGGKAVMALTALAP-----DRIDKLVAIDIAPVDYHVRRHDEIFAAINA--------------------VS 135 (255)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCSSCCCSCCCHHHHHHHHH--------------------HH
T ss_pred CCeeEEeeCccHHHHHHHHHhCc-----HhhccEEEEcCCcccCCcccHHHHHHHHHh--------------------cc
Confidence 38999999999999999999988 899999998753 221111 000100000 00
Q ss_pred ccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccC----CCCHHHHHH-HHHHHHhCCccccCCcccccccCCCCcc
Q 011833 330 HPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFG----NIPTKLISQ-LTTVFQEGGLCDRSGTFFYKDHIGKTNV 404 (476)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~l~~i~v 404 (476)
.............+ .. ....+....++..... ......+.. +.... . .+.+.++++
T Consensus 136 ~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~l~~i~~ 196 (255)
T 3bf7_A 136 ESDAQTRQQAAAIM----RQ--HLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIV------------G-WEKIPAWDH 196 (255)
T ss_dssp HSCCCSHHHHHHHH----TT--TCCCHHHHHHHHTTEETTEESSCHHHHHHTHHHHH------------C-CCCCCCCCS
T ss_pred ccccccHHHHHHHH----hh--hcchhHHHHHHHHhccCCceeecHHHHHhhhhhcc------------c-cccccccCC
Confidence 00000000000000 00 0001111111111000 011111111 11000 0 123678999
Q ss_pred cEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 405 PVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 405 PvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
|+|+|+|++|.++|++..+.+.+.+++. +++++ +++||+.. .+.|+++.+.|.+||++|
T Consensus 197 P~l~i~G~~D~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 197 PALFIPGGNSPYVSEQYRDDLLAQFPQA--RAHVI-----AGAGHWVH---AEKPDAVLRAIRRYLNDH 255 (255)
T ss_dssp CEEEECBTTCSTTCGGGHHHHHHHCTTE--EECCB-----TTCCSCHH---HHCHHHHHHHHHHHHHTC
T ss_pred CeEEEECCCCCCCCHHHHHHHHHHCCCC--eEEEe-----CCCCCccc---cCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999864 67776 89999544 677899999999999876
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.93 E-value=8.1e-25 Score=218.61 Aligned_cols=234 Identities=18% Similarity=0.272 Sum_probs=147.3
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCC-CCccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGA-GLSAHRV 144 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~-G~S~~~~ 144 (476)
+.+++. +.||.++.++.+.|....+..+|+|||+||++++...| ..+++.|+++||+|+++|+||| |.|++..
T Consensus 8 ~~~~i~-~~dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~~~-----~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~ 81 (305)
T 1tht_A 8 IAHVLR-VNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHF-----AGLAEYLSTNGFHVFRYDSLHHVGLSSGSI 81 (305)
T ss_dssp EEEEEE-ETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGG-----HHHHHHHHTTTCCEEEECCCBCC-------
T ss_pred eEEEEE-cCCCCEEEEEEecCcccCCCCCCEEEEecCCccCchHH-----HHHHHHHHHCCCEEEEeeCCCCCCCCCCcc
Confidence 455666 57999999999876533223568999999999999999 5899999999999999999999 9986422
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
.
T Consensus 82 ~------------------------------------------------------------------------------- 82 (305)
T 1tht_A 82 D------------------------------------------------------------------------------- 82 (305)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHH
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRL 304 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~ 304 (476)
.|++++++ +|+.++++++.+ .+. .+++++||||||.+++.+|.+ | +|+++|++++...... ....
T Consensus 83 -~~~~~~~~-~D~~~~~~~l~~-~~~--~~~~lvGhSmGG~iA~~~A~~-~------~v~~lvl~~~~~~~~~---~~~~ 147 (305)
T 1tht_A 83 -EFTMTTGK-NSLCTVYHWLQT-KGT--QNIGLIAASLSARVAYEVISD-L------ELSFLITAVGVVNLRD---TLEK 147 (305)
T ss_dssp -CCCHHHHH-HHHHHHHHHHHH-TTC--CCEEEEEETHHHHHHHHHTTT-S------CCSEEEEESCCSCHHH---HHHH
T ss_pred -ceehHHHH-HHHHHHHHHHHh-CCC--CceEEEEECHHHHHHHHHhCc-c------CcCEEEEecCchhHHH---HHHH
Confidence 35666666 899999999974 333 489999999999999999877 3 5889999876432110 0000
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhC
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEG 384 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (476)
.... ....... .. + +.... +.. ..... ..|.......
T Consensus 148 ~~~~----------------------~~~~~~~---~~----~--~~~~~------~~~---~~~~~---~~~~~~~~~~ 184 (305)
T 1tht_A 148 ALGF----------------------DYLSLPI---DE----L--PNDLD------FEG---HKLGS---EVFVRDCFEH 184 (305)
T ss_dssp HHSS----------------------CGGGSCG---GG----C--CSEEE------ETT---EEEEH---HHHHHHHHHT
T ss_pred Hhhh----------------------hhhhcch---hh----C--ccccc------ccc---cccCH---HHHHHHHHhc
Confidence 0000 0000000 00 0 00000 000 00000 0010000000
Q ss_pred CccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCccc
Q 011833 385 GLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHY 450 (476)
Q Consensus 385 ~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~ 450 (476)
.+. ......+.+.++++|+|+|+|++|.++|++.++++.+.++..+.+++++ +++||.
T Consensus 185 ~~~---~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~~~~~~l~~i-----~~agH~ 242 (305)
T 1tht_A 185 HWD---TLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSL-----LGSSHD 242 (305)
T ss_dssp TCS---SHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEE-----TTCCSC
T ss_pred ccc---chhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcCCCCcEEEEe-----CCCCCc
Confidence 000 0001123578899999999999999999999999999987555678887 999994
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-24 Score=210.59 Aligned_cols=259 Identities=14% Similarity=0.153 Sum_probs=161.9
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.+|.++.+.... .+|+||++||++++...|. ..++..|.++||+|+++|+||+|.|....
T Consensus 29 ~~~~~~l~y~~~g-------~~~~vv~lHG~~~~~~~~~----~~~~~~l~~~g~~vi~~D~~G~G~s~~~~-------- 89 (293)
T 3hss_A 29 EFRVINLAYDDNG-------TGDPVVFIAGRGGAGRTWH----PHQVPAFLAAGYRCITFDNRGIGATENAE-------- 89 (293)
T ss_dssp TSCEEEEEEEEEC-------SSEEEEEECCTTCCGGGGT----TTTHHHHHHTTEEEEEECCTTSGGGTTCC--------
T ss_pred ccccceEEEEEcC-------CCCEEEEECCCCCchhhcc----hhhhhhHhhcCCeEEEEccCCCCCCCCcc--------
Confidence 3467778776652 3689999999999999992 26788898999999999999999885432
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.++++++
T Consensus 90 -------------------------------------------------------------------------~~~~~~~ 96 (293)
T 3hss_A 90 -------------------------------------------------------------------------GFTTQTM 96 (293)
T ss_dssp -------------------------------------------------------------------------SCCHHHH
T ss_pred -------------------------------------------------------------------------cCCHHHH
Confidence 2455666
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchh
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPI 312 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~ 312 (476)
+ +|+.++++.+ +. ++++++||||||.+++.++.++| .+|+++|++++................
T Consensus 97 ~-~~~~~~l~~l----~~--~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~----- 159 (293)
T 3hss_A 97 V-ADTAALIETL----DI--APARVVGVSMGAFIAQELMVVAP-----ELVSSAVLMATRGRLDRARQFFNKAEA----- 159 (293)
T ss_dssp H-HHHHHHHHHH----TC--CSEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCSSCCHHHHHHHHHHH-----
T ss_pred H-HHHHHHHHhc----CC--CcEEEEeeCccHHHHHHHHHHCh-----HHHHhhheecccccCChhhhHHHHHHH-----
Confidence 5 6777777766 32 38999999999999999999987 889999999987644322111110000
Q ss_pred hhccCCcCChHHHHHhhccCCCCchHHHHHHHHh--hcCCCCCCHHHHHHHh---hhccCCCCHHHHHHHHHHHHhCCcc
Q 011833 313 QALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFL--ISAPDMMHPELFEKLI---FSNFGNIPTKLISQLTTVFQEGGLC 387 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (476)
.+... ............... ..............+. ......... .+...+.
T Consensus 160 -----------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----- 216 (293)
T 3hss_A 160 -----------ELYDS---GVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTP----GLRCQLD----- 216 (293)
T ss_dssp -----------HHHHH---TCCCCHHHHHHHHHHHHSCHHHHTCHHHHHHHHHHHHHSCCCCCH----HHHHHHT-----
T ss_pred -----------HHHhh---cccchhhHHHHHHHhhhcccccccccccHHHHHHHHhhccccccH----HHHhHhh-----
Confidence 00000 000000000000000 0000000000000000 000000000 0001110
Q ss_pred ccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHH
Q 011833 388 DRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCII 467 (476)
Q Consensus 388 ~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~ 467 (476)
..........+.++++|+|+++|++|.++|++.++.+.+.+++. +++++ +++||..+ .+.++++.+.|.
T Consensus 217 -~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~~~p~~~~~~i~ 285 (293)
T 3hss_A 217 -CAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPNG--RYLQI-----PDAGHLGF---FERPEAVNTAML 285 (293)
T ss_dssp -SSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHSTTE--EEEEE-----TTCCTTHH---HHSHHHHHHHHH
T ss_pred -hccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCc--eEEEe-----CCCcchHh---hhCHHHHHHHHH
Confidence 00112233467889999999999999999999999999999864 67777 89999654 577899999999
Q ss_pred HHHHhhc
Q 011833 468 EFLTRHD 474 (476)
Q Consensus 468 ~fL~~~~ 474 (476)
+||++..
T Consensus 286 ~fl~~~~ 292 (293)
T 3hss_A 286 KFFASVK 292 (293)
T ss_dssp HHHHTCC
T ss_pred HHHHhcC
Confidence 9998754
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-25 Score=209.35 Aligned_cols=248 Identities=16% Similarity=0.190 Sum_probs=159.9
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.||.++.+..+. ++|+||++||++++...| ..+++.|+ +||+|+++|+||||.|....
T Consensus 9 ~~~g~~l~~~~~g-------~~~~vv~lHG~~~~~~~~-----~~~~~~l~-~~~~vi~~d~~G~G~S~~~~-------- 67 (262)
T 3r0v_A 9 SSDGTPIAFERSG-------SGPPVVLVGGALSTRAGG-----APLAERLA-PHFTVICYDRRGRGDSGDTP-------- 67 (262)
T ss_dssp CTTSCEEEEEEEE-------CSSEEEEECCTTCCGGGG-----HHHHHHHT-TTSEEEEECCTTSTTCCCCS--------
T ss_pred cCCCcEEEEEEcC-------CCCcEEEECCCCcChHHH-----HHHHHHHh-cCcEEEEEecCCCcCCCCCC--------
Confidence 5799999988763 257899999999999999 58889998 89999999999999996532
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.++++++
T Consensus 68 -------------------------------------------------------------------------~~~~~~~ 74 (262)
T 3r0v_A 68 -------------------------------------------------------------------------PYAVERE 74 (262)
T ss_dssp -------------------------------------------------------------------------SCCHHHH
T ss_pred -------------------------------------------------------------------------CCCHHHH
Confidence 2556666
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchh
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPI 312 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~ 312 (476)
+ +|+.++++.+ + ++++++||||||.+++.++.++| +|+++|+++++...........
T Consensus 75 ~-~~~~~~~~~l----~---~~~~l~G~S~Gg~ia~~~a~~~p------~v~~lvl~~~~~~~~~~~~~~~--------- 131 (262)
T 3r0v_A 75 I-EDLAAIIDAA----G---GAAFVFGMSSGAGLSLLAAASGL------PITRLAVFEPPYAVDDSRPPVP--------- 131 (262)
T ss_dssp H-HHHHHHHHHT----T---SCEEEEEETHHHHHHHHHHHTTC------CEEEEEEECCCCCCSTTSCCCC---------
T ss_pred H-HHHHHHHHhc----C---CCeEEEEEcHHHHHHHHHHHhCC------CcceEEEEcCCcccccccchhh---------
Confidence 6 6777777765 2 38999999999999999999853 6999999998765443210000
Q ss_pred hhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHH------HHHHHHhCCc
Q 011833 313 QALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQ------LTTVFQEGGL 386 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 386 (476)
......+............+..+... .....++..+.+.... ....... +.......
T Consensus 132 -------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-- 194 (262)
T 3r0v_A 132 -------PDYQTRLDALLAEGRRGDAVTYFMTE----GVGVPPDLVAQMQQAP----MWPGMEAVAHTLPYDHAVMGD-- 194 (262)
T ss_dssp -------TTHHHHHHHHHHTTCHHHHHHHHHHH----TSCCCHHHHHHHHTST----THHHHHHTGGGHHHHHHHHTT--
T ss_pred -------hHHHHHHHHHhhccchhhHHHHHhhc----ccCCCHHHHHHHHhhh----cccchHHHHhhhhhhhhhhhc--
Confidence 00000000010000000011111111 1122233333332110 0000000 00000000
Q ss_pred cccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHH
Q 011833 387 CDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCI 466 (476)
Q Consensus 387 ~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i 466 (476)
.......+.++++|+|+|+|++|.++|++.++++.+.+++. +++++ +++||+ +.++++.+.|
T Consensus 195 -----~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~------~~p~~~~~~i 256 (262)
T 3r0v_A 195 -----NTIPTARFASISIPTLVMDGGASPAWIRHTAQELADTIPNA--RYVTL-----ENQTHT------VAPDAIAPVL 256 (262)
T ss_dssp -----SCCCHHHHTTCCSCEEEEECTTCCHHHHHHHHHHHHHSTTE--EEEEC-----CCSSSS------CCHHHHHHHH
T ss_pred -----CCCCHHHcCcCCCCEEEEeecCCCCCCHHHHHHHHHhCCCC--eEEEe-----cCCCcc------cCHHHHHHHH
Confidence 11112467889999999999999999999999999999875 67777 899992 4689999999
Q ss_pred HHHHHh
Q 011833 467 IEFLTR 472 (476)
Q Consensus 467 ~~fL~~ 472 (476)
.+||++
T Consensus 257 ~~fl~~ 262 (262)
T 3r0v_A 257 VEFFTR 262 (262)
T ss_dssp HHHHC-
T ss_pred HHHHhC
Confidence 999974
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=209.34 Aligned_cols=289 Identities=14% Similarity=0.092 Sum_probs=160.3
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
+..++. .+|.+++++.+. .+|+|||+||++++...| ..++..|++ ||+|+++|+||||.|+....
T Consensus 14 ~~~~~~--~~g~~l~~~~~g-------~~~~vv~lHG~~~~~~~~-----~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~ 78 (306)
T 3r40_A 14 GSEWIN--TSSGRIFARVGG-------DGPPLLLLHGFPQTHVMW-----HRVAPKLAE-RFKVIVADLPGYGWSDMPES 78 (306)
T ss_dssp EEEEEC--CTTCCEEEEEEE-------CSSEEEEECCTTCCGGGG-----GGTHHHHHT-TSEEEEECCTTSTTSCCCCC
T ss_pred ceEEEE--eCCEEEEEEEcC-------CCCeEEEECCCCCCHHHH-----HHHHHHhcc-CCeEEEeCCCCCCCCCCCCC
Confidence 444554 489999988763 358999999999999999 588899987 99999999999999976442
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
.. ...
T Consensus 79 ~~---------------------------------------------------------------------------~~~ 83 (306)
T 3r40_A 79 DE---------------------------------------------------------------------------QHT 83 (306)
T ss_dssp CT---------------------------------------------------------------------------TCG
T ss_pred Cc---------------------------------------------------------------------------ccC
Confidence 00 000
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHh
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLL 305 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~ 305 (476)
.+++++++ +|+.++++.+ +. ++++++||||||.+++.++.++| .+|+++|++++..............
T Consensus 84 ~~~~~~~~-~~~~~~l~~l----~~--~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~ 151 (306)
T 3r40_A 84 PYTKRAMA-KQLIEAMEQL----GH--VHFALAGHNRGARVSYRLALDSP-----GRLSKLAVLDILPTYEYWQRMNRAY 151 (306)
T ss_dssp GGSHHHHH-HHHHHHHHHT----TC--SSEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCCHHHHHHHCSHHH
T ss_pred CCCHHHHH-HHHHHHHHHh----CC--CCEEEEEecchHHHHHHHHHhCh-----hhccEEEEecCCCCccchhhhhhhh
Confidence 24555555 6776666654 33 48999999999999999999987 8899999999743221110000000
Q ss_pred hcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcC--CCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHh
Q 011833 306 LPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISA--PDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQE 383 (476)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (476)
.......... ....+ +...+... ....++...+...... .....++.++.+...............+......
T Consensus 152 ~~~~~~~~~~-~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (306)
T 3r40_A 152 ALKIYHWSFL-AQPAP---LPENLLGG-DPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAY 226 (306)
T ss_dssp HHHSTHHHHH-TSCTT---HHHHHHTS-CHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHT
T ss_pred hhhhHHHHHh-hcccc---hHHHHHcC-CHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhccc
Confidence 0000000000 00000 00000000 0011111222222222 3344555554443222110000111111111000
Q ss_pred CCccccCCcccccccCCCCcccEEEEeeCCCCcCC-HHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccch
Q 011833 384 GGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICP-TEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQV 462 (476)
Q Consensus 384 ~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp-~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v 462 (476)
..... .......+.++++|+|+|+|++|.++| ....+.+.+.+++. +++++ ++||+.+ .+.++++
T Consensus 227 ~~~~~---~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~--~~~~~------~~gH~~~---~e~p~~~ 292 (306)
T 3r40_A 227 ADFEH---DKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWASDV--QGAPI------ESGHFLP---EEAPDQT 292 (306)
T ss_dssp HHHHH---HHHHHHHTCCBCSCEEEEEETTCC------CHHHHHHHBSSE--EEEEE------SSCSCHH---HHSHHHH
T ss_pred ccchh---hhhhhhhccCCCcceEEEEecCCcccCchhHHHHHHhhcCCC--eEEEe------cCCcCch---hhChHHH
Confidence 00000 000001468899999999999999999 55566666666653 66665 5799544 6788999
Q ss_pred hHHHHHHHHhhcC
Q 011833 463 YPCIIEFLTRHDM 475 (476)
Q Consensus 463 ~~~i~~fL~~~~~ 475 (476)
.+.|.+||+++..
T Consensus 293 ~~~i~~fl~~~~~ 305 (306)
T 3r40_A 293 AEALVRFFSAAPG 305 (306)
T ss_dssp HHHHHHHHHC---
T ss_pred HHHHHHHHHhccC
Confidence 9999999998653
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=205.62 Aligned_cols=270 Identities=18% Similarity=0.169 Sum_probs=160.1
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
+.+++.+ ||.++.++.+.+. .+|+||++||++++...| ..+++.|+++||+|+++|+||+|.|.....
T Consensus 5 ~~~~~~~--~g~~l~~~~~g~~-----~~~~vv~~hG~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~ 72 (286)
T 3qit_A 5 EEKFLEF--GGNQICLCSWGSP-----EHPVVLCIHGILEQGLAW-----QEVALPLAAQGYRVVAPDLFGHGRSSHLEM 72 (286)
T ss_dssp EEEEEEE--TTEEEEEEEESCT-----TSCEEEEECCTTCCGGGG-----HHHHHHHHHTTCEEEEECCTTSTTSCCCSS
T ss_pred hhheeec--CCceEEEeecCCC-----CCCEEEEECCCCcccchH-----HHHHHHhhhcCeEEEEECCCCCCCCCCCCC
Confidence 4455654 9999999988542 368999999999999999 589999999999999999999999965431
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
. .
T Consensus 73 ~------------------------------------------------------------------------------~ 74 (286)
T 3qit_A 73 V------------------------------------------------------------------------------T 74 (286)
T ss_dssp G------------------------------------------------------------------------------G
T ss_pred C------------------------------------------------------------------------------C
Confidence 0 1
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCCh--hhHH
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSN--SLLR 303 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~--~~~~ 303 (476)
.+++++++ +|+.++++.+ +. ++++++||||||.+++.++.++| .+|+++|++++........ ....
T Consensus 75 ~~~~~~~~-~~~~~~~~~~----~~--~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~ 142 (286)
T 3qit_A 75 SYSSLTFL-AQIDRVIQEL----PD--QPLLLVGHSMGAMLATAIASVRP-----KKIKELILVELPLPAEESKKESAVN 142 (286)
T ss_dssp GCSHHHHH-HHHHHHHHHS----CS--SCEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCCCCCC---CCHHH
T ss_pred CcCHHHHH-HHHHHHHHhc----CC--CCEEEEEeCHHHHHHHHHHHhCh-----hhccEEEEecCCCCCccccchhhhH
Confidence 24455555 5666665544 33 48999999999999999999987 8899999999876554332 0111
Q ss_pred HhhcCcchhhhccCCcCChHHHHHhhccCCCC--chHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHH------HHH
Q 011833 304 LLLPLSDPIQALNVPVIPLGTFLAAIHPFASS--PPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTK------LIS 375 (476)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 375 (476)
.+.. .+......... ....................+....+........... ...
T Consensus 143 ~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (286)
T 3qit_A 143 QLTT-----------------CLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAII 205 (286)
T ss_dssp HHHH-----------------HHHHHTCCCCCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGG
T ss_pred HHHH-----------------HHHHHhccccccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhh
Confidence 1100 00000000000 0000000000000011122222222211110000000 000
Q ss_pred HHHHHHHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccc
Q 011833 376 QLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGS 455 (476)
Q Consensus 376 ~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~ 455 (476)
..........+. .....+...+.++++|+|+|+|++|.++|++..+.+.+.+++. +++++ ++ ||+.+
T Consensus 206 ~~~~~~~~~~~~--~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~g-gH~~~--- 272 (286)
T 3qit_A 206 RTRSILGLNNLP--GGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQA--KRVFL-----SG-GHNLH--- 272 (286)
T ss_dssp GGHHHHTTTSCT--THHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHSTTS--EEEEE-----SS-SSCHH---
T ss_pred hccccccccccc--cchhHHHHHHhccCCCeEEEEeCCCcccCHHHHHHHHHHCCCC--eEEEe-----eC-CchHh---
Confidence 000000000000 0011122356788999999999999999999999999999875 67777 78 99554
Q ss_pred cCCccchhHHHH
Q 011833 456 RLAAYQVYPCII 467 (476)
Q Consensus 456 ~~~~~~v~~~i~ 467 (476)
.+.++++.+.|.
T Consensus 273 ~e~p~~~~~~i~ 284 (286)
T 3qit_A 273 IDAAAALASLIL 284 (286)
T ss_dssp HHTHHHHHHHHH
T ss_pred hhChHHHHHHhh
Confidence 567777777665
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=215.06 Aligned_cols=125 Identities=18% Similarity=0.305 Sum_probs=100.7
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccc--c
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHR--V 144 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~--~ 144 (476)
..++.+ +|.++++..+. .+|+|||+||++++...| ..++..|+++||+|+++|+||||.|++. .
T Consensus 13 ~~~~~~--~g~~l~y~~~G-------~g~~vvllHG~~~~~~~w-----~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~ 78 (328)
T 2cjp_A 13 HKMVAV--NGLNMHLAELG-------EGPTILFIHGFPELWYSW-----RHQMVYLAERGYRAVAPDLRGYGDTTGAPLN 78 (328)
T ss_dssp EEEEEE--TTEEEEEEEEC-------SSSEEEEECCTTCCGGGG-----HHHHHHHHTTTCEEEEECCTTSTTCBCCCTT
T ss_pred eeEecC--CCcEEEEEEcC-------CCCEEEEECCCCCchHHH-----HHHHHHHHHCCcEEEEECCCCCCCCCCcCcC
Confidence 345544 89999888762 258999999999999999 5788999989999999999999999754 1
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
. .
T Consensus 79 ~------------------------------------------------------------------------------~ 80 (328)
T 2cjp_A 79 D------------------------------------------------------------------------------P 80 (328)
T ss_dssp C------------------------------------------------------------------------------G
T ss_pred C------------------------------------------------------------------------------c
Confidence 1 0
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
..|++++++ +|+.++++.+.. ..+++++|||||||.+++.+|.++| ++|+++|+++++.
T Consensus 81 ~~~~~~~~a-~dl~~~l~~l~~----~~~~~~lvGhS~Gg~ia~~~A~~~p-----~~v~~lvl~~~~~ 139 (328)
T 2cjp_A 81 SKFSILHLV-GDVVALLEAIAP----NEEKVFVVAHDWGALIAWHLCLFRP-----DKVKALVNLSVHF 139 (328)
T ss_dssp GGGSHHHHH-HHHHHHHHHHCT----TCSSEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCC
T ss_pred ccccHHHHH-HHHHHHHHHhcC----CCCCeEEEEECHHHHHHHHHHHhCh-----hheeEEEEEccCC
Confidence 135667777 788888887621 1248999999999999999999998 8999999998754
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-25 Score=209.78 Aligned_cols=257 Identities=15% Similarity=0.146 Sum_probs=159.1
Q ss_pred CceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHh-CCCcEEEecCCCCCCcccccccCcccccc
Q 011833 75 SDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSG-QGFDTWILEVRGAGLSAHRVEFGEDSMIT 153 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~-~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~ 153 (476)
+|.++.+.... ++|+||++||++++...| ..++..|++ +||+|+++|+||||.|.....
T Consensus 9 ~g~~l~y~~~g-------~~~~vv~lhG~~~~~~~~-----~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~-------- 68 (272)
T 3fsg_A 9 TRSNISYFSIG-------SGTPIIFLHGLSLDKQST-----CLFFEPLSNVGQYQRIYLDLPGMGNSDPISP-------- 68 (272)
T ss_dssp CTTCCEEEEEC-------CSSEEEEECCTTCCHHHH-----HHHHTTSTTSTTSEEEEECCTTSTTCCCCSS--------
T ss_pred cCCeEEEEEcC-------CCCeEEEEeCCCCcHHHH-----HHHHHHHhccCceEEEEecCCCCCCCCCCCC--------
Confidence 88888887652 358899999999999888 467777877 799999999999999965321
Q ss_pred ccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhh
Q 011833 154 SANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYL 233 (476)
Q Consensus 154 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (476)
+++++++
T Consensus 69 -------------------------------------------------------------------------~~~~~~~ 75 (272)
T 3fsg_A 69 -------------------------------------------------------------------------STSDNVL 75 (272)
T ss_dssp -------------------------------------------------------------------------CSHHHHH
T ss_pred -------------------------------------------------------------------------CCHHHHH
Confidence 3455555
Q ss_pred hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhh
Q 011833 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQ 313 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~ 313 (476)
+|+.++++.+ .+. ++++++||||||.+++.++.++| .+|+++|++++................... .
T Consensus 76 -~~~~~~l~~~---~~~--~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~--~ 142 (272)
T 3fsg_A 76 -ETLIEAIEEI---IGA--RRFILYGHSYGGYLAQAIAFHLK-----DQTLGVFLTCPVITADHSKRLTGKHINILE--E 142 (272)
T ss_dssp -HHHHHHHHHH---HTT--CCEEEEEEEHHHHHHHHHHHHSG-----GGEEEEEEEEECSSCCGGGCCCCCCCCEEC--S
T ss_pred -HHHHHHHHHH---hCC--CcEEEEEeCchHHHHHHHHHhCh-----HhhheeEEECcccccCccccccccchhhhh--h
Confidence 6777777763 222 48999999999999999999987 889999999987543321100000000000 0
Q ss_pred hccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhh---ccCCCCHHHHHHHHHHHHhCCccccC
Q 011833 314 ALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFS---NFGNIPTKLISQLTTVFQEGGLCDRS 390 (476)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (476)
.+ ...+... ....+...... ..+.....+... ...... ..+...+.... .
T Consensus 143 ~~-~~~~~~~--------------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~--- 195 (272)
T 3fsg_A 143 DI-NPVENKE--------------YFADFLSMNVI----INNQAWHDYQNLIIPGLQKED----KTFIDQLQNNY-S--- 195 (272)
T ss_dssp CC-CCCTTGG--------------GHHHHHHHCSE----ESHHHHHHHHHHTHHHHHHCC----HHHHHHHTTSC-S---
T ss_pred hh-hcccCHH--------------HHHHHHHHhcc----CCCchhHHHHHHhhhhhhhcc----HHHHHHHhhhc-C---
Confidence 00 0000000 00000000000 011111111100 000000 01111111110 0
Q ss_pred CcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHH
Q 011833 391 GTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFL 470 (476)
Q Consensus 391 g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL 470 (476)
-.......+.++++|+|+|+|++|.++|++.++.+.+.+++. +++++ +++||..+ .+.++++.+.|.+||
T Consensus 196 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~~~~~~~~~~i~~fl 265 (272)
T 3fsg_A 196 FTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNENG--EIVLL-----NRTGHNLM---IDQREAVGFHFDLFL 265 (272)
T ss_dssp CTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHHHHHTTCTTE--EEEEE-----SSCCSSHH---HHTHHHHHHHHHHHH
T ss_pred CChhhhhhhccCCCCEEEEEeCCCCcCCHHHHHHHHHhcCCC--eEEEe-----cCCCCCch---hcCHHHHHHHHHHHH
Confidence 011111256889999999999999999999999999999864 77777 89999654 567899999999999
Q ss_pred Hhhc
Q 011833 471 TRHD 474 (476)
Q Consensus 471 ~~~~ 474 (476)
++..
T Consensus 266 ~~~~ 269 (272)
T 3fsg_A 266 DELN 269 (272)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8753
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=208.42 Aligned_cols=252 Identities=17% Similarity=0.224 Sum_probs=148.0
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccch
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQS 171 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 171 (476)
+.+++|||+||++.++..| ..++..|+++||+|+++|+||||.|++...
T Consensus 8 ~~g~~vvllHG~~~~~~~w-----~~~~~~L~~~g~~via~Dl~G~G~S~~~~~-------------------------- 56 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAWIW-----YKLKPLLESAGHKVTAVDLSAAGINPRRLD-------------------------- 56 (264)
T ss_dssp -CCCEEEEECCTTCCGGGG-----TTHHHHHHHTTCEEEEECCTTSTTCSCCGG--------------------------
T ss_pred CCCCeEEEECCCccccchH-----HHHHHHHHhCCCEEEEeecCCCCCCCCCcc--------------------------
Confidence 4578999999999999999 689999998999999999999999965321
Q ss_pred hhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCC
Q 011833 172 KSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPK 251 (476)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~ 251 (476)
..|++++++ +|+.++++.+ +.
T Consensus 57 -----------------------------------------------------~~~~~~~~a-~dl~~~l~~l----~~- 77 (264)
T 2wfl_A 57 -----------------------------------------------------EIHTFRDYS-EPLMEVMASI----PP- 77 (264)
T ss_dssp -----------------------------------------------------GCCSHHHHH-HHHHHHHHHS----CT-
T ss_pred -----------------------------------------------------cccCHHHHH-HHHHHHHHHh----CC-
Confidence 025677777 7887777765 11
Q ss_pred CCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC-Ch-hhHHHhhcCcchhhhccCCcCChHHHHHhh
Q 011833 252 DGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP-SN-SLLRLLLPLSDPIQALNVPVIPLGTFLAAI 329 (476)
Q Consensus 252 ~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (476)
.+++++|||||||.+++.++.++| ++|+++|++++...... .. .....+.......... ...
T Consensus 78 ~~~~~lvGhSmGG~va~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 141 (264)
T 2wfl_A 78 DEKVVLLGHSFGGMSLGLAMETYP-----EKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMML-----------DSQ 141 (264)
T ss_dssp TCCEEEEEETTHHHHHHHHHHHCG-----GGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTT-----------TCE
T ss_pred CCCeEEEEeChHHHHHHHHHHhCh-----hhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhh-----------hhh
Confidence 138999999999999999999988 89999999987431111 10 0000010000000000 000
Q ss_pred ccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC-c--cccCCcccccccCCCCcccE
Q 011833 330 HPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG-L--CDRSGTFFYKDHIGKTNVPV 406 (476)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~g~~~~~~~l~~i~vPv 406 (476)
........ .........++.+..... ...+... ..+........ . ........+. .....++|+
T Consensus 142 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~ 208 (264)
T 2wfl_A 142 FSTYGNPE--------NPGMSMILGPQFMALKMF---QNCSVED-LELAKMLTRPGSLFFQDLAKAKKFS-TERYGSVKR 208 (264)
T ss_dssp EEEESCTT--------SCEEEEECCHHHHHHHTS---TTSCHHH-HHHHHHHCCCEECCHHHHTTSCCCC-TTTGGGSCE
T ss_pred hhhccCCC--------CCcchhhhhHHHHHHHHh---cCCCHHH-HHHHHhccCCCcccccccccccccC-hHHhCCCCe
Confidence 00000000 000000001111111100 0011110 01111110000 0 0000000000 011146899
Q ss_pred EEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 407 LALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 407 Lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
|+|+|++|.++|++..+.+.+.+++. +++++ +++||..+ .|.|+++.+.|.+|+++
T Consensus 209 l~i~G~~D~~~~~~~~~~~~~~~p~~--~~~~i-----~~~gH~~~---~e~P~~~~~~l~~f~~~ 264 (264)
T 2wfl_A 209 AYIFCNEDKSFPVEFQKWFVESVGAD--KVKEI-----KEADHMGM---LSQPREVCKCLLDISDS 264 (264)
T ss_dssp EEEEETTCSSSCHHHHHHHHHHHCCS--EEEEE-----TTCCSCHH---HHSHHHHHHHHHHHHC-
T ss_pred EEEEeCCcCCCCHHHHHHHHHhCCCc--eEEEe-----CCCCCchh---hcCHHHHHHHHHHHhhC
Confidence 99999999999999999999999976 67777 89999554 78899999999999853
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=204.74 Aligned_cols=250 Identities=12% Similarity=0.128 Sum_probs=155.3
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhh
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKS 173 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (476)
+|+|||+||++++...| ..+++.|++ ||+|+++|+||||.|......
T Consensus 20 ~p~vv~~HG~~~~~~~~-----~~~~~~l~~-g~~v~~~D~~G~G~S~~~~~~--------------------------- 66 (269)
T 4dnp_A 20 ERVLVLAHGFGTDQSAW-----NRILPFFLR-DYRVVLYDLVCAGSVNPDFFD--------------------------- 66 (269)
T ss_dssp SSEEEEECCTTCCGGGG-----TTTGGGGTT-TCEEEEECCTTSTTSCGGGCC---------------------------
T ss_pred CCEEEEEeCCCCcHHHH-----HHHHHHHhC-CcEEEEEcCCCCCCCCCCCCC---------------------------
Confidence 58999999999999999 688888987 999999999999999552210
Q ss_pred hHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCC
Q 011833 174 QLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDG 253 (476)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ 253 (476)
....+++++++ +|+.++++.+ +. +
T Consensus 67 -------------------------------------------------~~~~~~~~~~~-~~~~~~~~~~----~~--~ 90 (269)
T 4dnp_A 67 -------------------------------------------------FRRYTTLDPYV-DDLLHILDAL----GI--D 90 (269)
T ss_dssp -------------------------------------------------TTTCSSSHHHH-HHHHHHHHHT----TC--C
T ss_pred -------------------------------------------------ccccCcHHHHH-HHHHHHHHhc----CC--C
Confidence 00113556656 6777766654 32 3
Q ss_pred cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccCC
Q 011833 254 KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFA 333 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (476)
+++++||||||.+++.++.++| .+|+++|++++.............+. . .....++..+...
T Consensus 91 ~~~l~GhS~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~----~--------~~~~~~~~~~~~~- 152 (269)
T 4dnp_A 91 CCAYVGHSVSAMIGILASIRRP-----ELFSKLILIGASPRFLNDEDYHGGFE----Q--------GEIEKVFSAMEAN- 152 (269)
T ss_dssp SEEEEEETHHHHHHHHHHHHCT-----TTEEEEEEESCCSCCBCBTTBCCSBC----H--------HHHHHHHHHHHHC-
T ss_pred eEEEEccCHHHHHHHHHHHhCc-----HhhceeEEeCCCCCCCChHHhccccc----h--------HHHHHHHHhcccc-
Confidence 8999999999999999999987 78999999998654332210000000 0 0000001100000
Q ss_pred CCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeCC
Q 011833 334 SSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQ 413 (476)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~ 413 (476)
...+...+...... ...++..+.+..... .........+...+.. .+..+.+.++++|+|+++|++
T Consensus 153 -~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~P~l~i~g~~ 218 (269)
T 4dnp_A 153 -YEAWVNGFAPLAVG---ADVPAAVREFSRTLF-NMRPDITLFVSRTVFN---------SDMRGVLGLVKVPCHIFQTAR 218 (269)
T ss_dssp -HHHHHHHHHHHHHC---SSCHHHHHHHHHHHH-HSCHHHHHHHHHHHHT---------CCCGGGGGGCCSCEEEEEEES
T ss_pred -HHHHHHHhhhhhcc---CCChhHHHHHHHHHH-ccCcchhhhHhhhhcc---------hhhHhhhccccCCEEEEecCC
Confidence 00011111111111 112222222221111 1122222222222211 122346788999999999999
Q ss_pred CCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 414 DLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 414 D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
|.++|++.++++.+.+++. ++++++ +++||..+ .+.++++.+.|.+||+++
T Consensus 219 D~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~gH~~~---~~~p~~~~~~i~~fl~~~ 269 (269)
T 4dnp_A 219 DHSVPASVATYLKNHLGGK-NTVHWL-----NIEGHLPH---LSAPTLLAQELRRALSHR 269 (269)
T ss_dssp BTTBCHHHHHHHHHHSSSC-EEEEEE-----EEESSCHH---HHCHHHHHHHHHHHHC--
T ss_pred CcccCHHHHHHHHHhCCCC-ceEEEe-----CCCCCCcc---ccCHHHHHHHHHHHHhhC
Confidence 9999999999999999874 577777 88999554 577899999999999864
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.92 E-value=5.1e-24 Score=205.67 Aligned_cols=249 Identities=14% Similarity=0.111 Sum_probs=148.9
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhh
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKS 173 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (476)
+++|||+||++.++.+| ..++..|+++||+|+++|+||||.|+....
T Consensus 3 ~~~vvllHG~~~~~~~w-----~~~~~~L~~~g~~via~Dl~G~G~S~~~~~---------------------------- 49 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIW-----HKLKPLLEALGHKVTALDLAASGVDPRQIE---------------------------- 49 (257)
T ss_dssp CCEEEEECCTTCCGGGG-----TTHHHHHHHTTCEEEEECCTTSTTCSCCGG----------------------------
T ss_pred CCcEEEEcCCccCcCCH-----HHHHHHHHhCCCEEEEeCCCCCCCCCCCcc----------------------------
Confidence 57899999999999999 689999999999999999999999965221
Q ss_pred hHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCC
Q 011833 174 QLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDG 253 (476)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ 253 (476)
..|++++|+ +|+.++++.+. . .+
T Consensus 50 ---------------------------------------------------~~~~~~~~a-~dl~~~l~~l~---~--~~ 72 (257)
T 3c6x_A 50 ---------------------------------------------------EIGSFDEYS-EPLLTFLEALP---P--GE 72 (257)
T ss_dssp ---------------------------------------------------GCCSHHHHT-HHHHHHHHTSC---T--TC
T ss_pred ---------------------------------------------------cccCHHHHH-HHHHHHHHhcc---c--cC
Confidence 026777777 78887777541 1 13
Q ss_pred cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC-Chh-hHHHhhcCcchhhhccCCcCChHHHHHhhcc
Q 011833 254 KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP-SNS-LLRLLLPLSDPIQALNVPVIPLGTFLAAIHP 331 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (476)
++++|||||||.+++.++.++| ++|+++|++++...... ... ....+.... + .... ....
T Consensus 73 ~~~lvGhSmGG~va~~~a~~~p-----~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~-----------~~~~ 134 (257)
T 3c6x_A 73 KVILVGESCGGLNIAIAADKYC-----EKIAAAVFHNSVLPDTEHCPSYVVDKLMEVF-P-DWKD-----------TTYF 134 (257)
T ss_dssp CEEEEEEETHHHHHHHHHHHHG-----GGEEEEEEEEECCCCSSSCTTHHHHHHHHHS-C-CCTT-----------CEEE
T ss_pred CeEEEEECcchHHHHHHHHhCc-----hhhheEEEEecccCCCCCcchhHHHHHhhcC-c-chhh-----------hhhh
Confidence 8999999999999999999998 89999999997532111 100 000010000 0 0000 0000
Q ss_pred CCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhC-Cc-c-ccCCcccccccCCCCcccEEE
Q 011833 332 FASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEG-GL-C-DRSGTFFYKDHIGKTNVPVLA 408 (476)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~-~~~g~~~~~~~l~~i~vPvLi 408 (476)
...... .........++.+..... ...+.... .+....... .. . ........ ......++|+|+
T Consensus 135 ~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~l~ 201 (257)
T 3c6x_A 135 TYTKDG--------KEITGLKLGFTLLRENLY---TLCGPEEY-ELAKMLTRKGSLFQNILAKRPFF-TKEGYGSIKKIY 201 (257)
T ss_dssp EEEETT--------EEEEEEECCHHHHHHHTS---TTSCHHHH-HHHHHHCCCBCCCHHHHHHSCCC-CTTTGGGSCEEE
T ss_pred hccCCC--------CccccccccHHHHHHHHh---cCCCHHHH-HHHHHhcCCCccchhhhcccccc-ChhhcCcccEEE
Confidence 000000 000000011111111110 00111100 000000000 00 0 00000000 001113689999
Q ss_pred EeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 409 LAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 409 i~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
|+|++|.++|++.++++.+.+++. +++++ +++||..+ .|.|+++.+.|.+|+++.
T Consensus 202 i~G~~D~~~p~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 202 VWTDQDEIFLPEFQLWQIENYKPD--KVYKV-----EGGDHKLQ---LTKTKEIAEILQEVADTY 256 (257)
T ss_dssp EECTTCSSSCHHHHHHHHHHSCCS--EEEEC-----CSCCSCHH---HHSHHHHHHHHHHHHHHC
T ss_pred EEeCCCcccCHHHHHHHHHHCCCC--eEEEe-----CCCCCCcc---cCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999975 67777 89999555 788999999999999864
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.1e-24 Score=224.41 Aligned_cols=286 Identities=15% Similarity=0.193 Sum_probs=173.3
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
+..++. +.||.++++..+. .+|+||++||++++...| ..+++.|+++||+|+++|+||||.|.....
T Consensus 238 ~~~~~~-~~dg~~l~~~~~g-------~~p~vv~~HG~~~~~~~~-----~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~ 304 (555)
T 3i28_A 238 SHGYVT-VKPRVRLHFVELG-------SGPAVCLCHGFPESWYSW-----RYQIPALAQAGYRVLAMDMKGYGESSAPPE 304 (555)
T ss_dssp EEEEEE-EETTEEEEEEEEC-------SSSEEEEECCTTCCGGGG-----TTHHHHHHHTTCEEEEECCTTSTTSCCCSC
T ss_pred ceeEEE-eCCCcEEEEEEcC-------CCCEEEEEeCCCCchhHH-----HHHHHHHHhCCCEEEEecCCCCCCCCCCCC
Confidence 456676 5799999988762 368999999999999999 689999999999999999999999976432
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
. .
T Consensus 305 ~------------------------------------------------------------------------------~ 306 (555)
T 3i28_A 305 I------------------------------------------------------------------------------E 306 (555)
T ss_dssp G------------------------------------------------------------------------------G
T ss_pred c------------------------------------------------------------------------------c
Confidence 0 1
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh-hHHH
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS-LLRL 304 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~-~~~~ 304 (476)
.|++++++ +|+.++++.+ +. ++++++||||||.+++.++.++| .+|+++|+++++........ ....
T Consensus 307 ~~~~~~~~-~d~~~~~~~l----~~--~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~ 374 (555)
T 3i28_A 307 EYCMEVLC-KEMVTFLDKL----GL--SQAVFIGHDWGGMLVWYMALFYP-----ERVRAVASLNTPFIPANPNMSPLES 374 (555)
T ss_dssp GGSHHHHH-HHHHHHHHHH----TC--SCEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCCCCCCTTSCHHHH
T ss_pred cccHHHHH-HHHHHHHHHc----CC--CcEEEEEecHHHHHHHHHHHhCh-----HheeEEEEEccCCCCCCcccchHHH
Confidence 24555655 6777777765 32 48999999999999999999988 88999999998754433211 1111
Q ss_pred hh--cCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCC--CHHHHHH---Hhhh------ccCCCCH
Q 011833 305 LL--PLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMM--HPELFEK---LIFS------NFGNIPT 371 (476)
Q Consensus 305 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~------~~~~~~~ 371 (476)
+. +..........+......... .+..++...+...... ....+.. +... .......
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (555)
T 3i28_A 375 IKANPVFDYQLYFQEPGVAEAELEQ----------NLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTE 444 (555)
T ss_dssp HHTCGGGHHHHHHHSTTHHHHHHHH----------CHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCH
T ss_pred HhcCCccchhHHhhCCCchHHHHhh----------hHHHHHHHHhccccccccccccccccccccccCccccccccccCH
Confidence 10 000000000000000000000 0001111111100000 0000000 0000 0001112
Q ss_pred HHHHHHHHHHHhCCcccc----C-----CcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCC
Q 011833 372 KLISQLTTVFQEGGLCDR----S-----GTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEP 442 (476)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~----~-----g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~ 442 (476)
.....+...+....+... . ........+.++++|+|+|+|++|.++|++.++.+.+.+++. +++++
T Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~--- 519 (555)
T 3i28_A 445 EEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHL--KRGHI--- 519 (555)
T ss_dssp HHHHHHHHHHTTTTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTTC--EEEEE---
T ss_pred HHHHHHHHHHhcccchhHHHHHHhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCCCc--eEEEe---
Confidence 222222222221111100 0 001223467789999999999999999999999999999865 67777
Q ss_pred CCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 443 RGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 443 ~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
+++||+.+ .+.++++.+.|.+||+++.
T Consensus 520 --~~~gH~~~---~e~p~~~~~~i~~fl~~~~ 546 (555)
T 3i28_A 520 --EDCGHWTQ---MDKPTEVNQILIKWLDSDA 546 (555)
T ss_dssp --TTCCSCHH---HHSHHHHHHHHHHHHHHHT
T ss_pred --CCCCCCcc---hhCHHHHHHHHHHHHHhcc
Confidence 89999654 5778999999999998764
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=204.76 Aligned_cols=251 Identities=12% Similarity=0.137 Sum_probs=151.5
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhh
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKS 173 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (476)
+|+|||+||++++...| ..++..|+++||+|+++|+||||.|.....
T Consensus 4 g~~vv~lHG~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~---------------------------- 50 (258)
T 3dqz_A 4 KHHFVLVHNAYHGAWIW-----YKLKPLLESAGHRVTAVELAASGIDPRPIQ---------------------------- 50 (258)
T ss_dssp CCEEEEECCTTCCGGGG-----TTHHHHHHHTTCEEEEECCTTSTTCSSCGG----------------------------
T ss_pred CCcEEEECCCCCccccH-----HHHHHHHHhCCCEEEEecCCCCcCCCCCCC----------------------------
Confidence 48999999999999999 699999999999999999999999975331
Q ss_pred hHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCC
Q 011833 174 QLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDG 253 (476)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ 253 (476)
..+++++++ +|+.++++.+ +. .+
T Consensus 51 ---------------------------------------------------~~~~~~~~~-~~l~~~l~~l----~~-~~ 73 (258)
T 3dqz_A 51 ---------------------------------------------------AVETVDEYS-KPLIETLKSL----PE-NE 73 (258)
T ss_dssp ---------------------------------------------------GCCSHHHHH-HHHHHHHHTS----CT-TC
T ss_pred ---------------------------------------------------ccccHHHhH-HHHHHHHHHh----cc-cC
Confidence 024556655 6666666654 22 24
Q ss_pred cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh--hHHHhhcCcchhhhccCCcCChHHHHHhhcc
Q 011833 254 KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS--LLRLLLPLSDPIQALNVPVIPLGTFLAAIHP 331 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (476)
++++|||||||.+++.++.++| .+|+++|++++......... ..+.+... .... +.....
T Consensus 74 ~~~lvGhS~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~--~~~~-----------~~~~~~ 135 (258)
T 3dqz_A 74 EVILVGFSFGGINIALAADIFP-----AKIKVLVFLNAFLPDTTHVPSHVLDKYMEM--PGGL-----------GDCEFS 135 (258)
T ss_dssp CEEEEEETTHHHHHHHHHTTCG-----GGEEEEEEESCCCCCSSSCTTHHHHHHHTS--TTCC-----------TTCEEE
T ss_pred ceEEEEeChhHHHHHHHHHhCh-----HhhcEEEEecCCCCCCCCcchHHHHHhccc--chhh-----------hhcccc
Confidence 8999999999999999999988 89999999998654332210 11111000 0000 000000
Q ss_pred CCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCc-cccCCcccccccCCCCcccEEEEe
Q 011833 332 FASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGL-CDRSGTFFYKDHIGKTNVPVLALA 410 (476)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~l~~i~vPvLii~ 410 (476)
..... ..........++.+...+.. ..+......+......... ................++|+++|+
T Consensus 136 ~~~~~--------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 204 (258)
T 3dqz_A 136 SHETR--------NGTMSLLKMGPKFMKARLYQ---NCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVM 204 (258)
T ss_dssp EEEET--------TEEEEEEECCHHHHHHHTST---TSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEE
T ss_pred hhhhh--------ccChhhhhhhHHHHHHHhhc---cCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEE
Confidence 00000 00000000111111111110 1111111111111110000 000000000112233479999999
Q ss_pred eCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 411 ADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 411 G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
|++|.++|++..+.+.+.+++. +++++ +++||..+ .+.++++.+.|.+|++++
T Consensus 205 g~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~~~p~~~~~~i~~fl~~~ 257 (258)
T 3dqz_A 205 SSEDKAIPCDFIRWMIDNFNVS--KVYEI-----DGGDHMVM---LSKPQKLFDSLSAIATDY 257 (258)
T ss_dssp ETTCSSSCHHHHHHHHHHSCCS--CEEEE-----TTCCSCHH---HHSHHHHHHHHHHHHHHT
T ss_pred CCCCeeeCHHHHHHHHHhCCcc--cEEEc-----CCCCCchh---hcChHHHHHHHHHHHHHh
Confidence 9999999999999999999876 67777 89999655 578899999999999875
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.3e-25 Score=212.69 Aligned_cols=228 Identities=17% Similarity=0.138 Sum_probs=162.7
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.+|..+.++.+.|. .+|+||++||++++...| ..++..|+++||.|+++|+||+|.|.....
T Consensus 12 ~~~g~~l~~~~~~p~-----~~p~vv~~HG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~------- 74 (290)
T 3ksr_A 12 PVGQDELSGTLLTPT-----GMPGVLFVHGWGGSQHHS-----LVRAREAVGLGCICMTFDLRGHEGYASMRQ------- 74 (290)
T ss_dssp EETTEEEEEEEEEEE-----SEEEEEEECCTTCCTTTT-----HHHHHHHHTTTCEEECCCCTTSGGGGGGTT-------
T ss_pred cCCCeEEEEEEecCC-----CCcEEEEeCCCCCCcCcH-----HHHHHHHHHCCCEEEEeecCCCCCCCCCcc-------
Confidence 448999999999775 369999999999999888 588999999999999999999999865321
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.++++++
T Consensus 75 -------------------------------------------------------------------------~~~~~~~ 81 (290)
T 3ksr_A 75 -------------------------------------------------------------------------SVTRAQN 81 (290)
T ss_dssp -------------------------------------------------------------------------TCBHHHH
T ss_pred -------------------------------------------------------------------------cccHHHH
Confidence 2445555
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchh
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPI 312 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~ 312 (476)
. +|+.++++++.+..+.+.++++++||||||.+++.++.++| ++++++++|.........
T Consensus 82 ~-~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~-------~~~~~l~~p~~~~~~~~~------------ 141 (290)
T 3ksr_A 82 L-DDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP-------VEWLALRSPALYKDAHWD------------ 141 (290)
T ss_dssp H-HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC-------CSEEEEESCCCCCSSCTT------------
T ss_pred H-HHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC-------CCEEEEeCcchhhhhhhh------------
Confidence 5 89999999998765444458999999999999999998865 888999888664332100
Q ss_pred hhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCc
Q 011833 313 QALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGT 392 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 392 (476)
.+... +.. . ..+..+..... .. ..
T Consensus 142 -------~~~~~-~~~-~-------------------------~~~~~~~~~~~-~~---------------------~~ 165 (290)
T 3ksr_A 142 -------QPKVS-LNA-D-------------------------PDLMDYRRRAL-AP---------------------GD 165 (290)
T ss_dssp -------SBHHH-HHH-S-------------------------TTHHHHTTSCC-CG---------------------GG
T ss_pred -------ccccc-ccC-C-------------------------hhhhhhhhhhh-hh---------------------cc
Confidence 00000 000 0 00000000000 00 00
Q ss_pred ccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCc-eeEEEecCCCCCCCcccccccccCCccchhHHHHHHHH
Q 011833 393 FFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHL-VSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLT 471 (476)
Q Consensus 393 ~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~-~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~ 471 (476)
......+.++++|+|+++|++|.++|++.++.+.+.+++.. +++.++ +++||.-. ..+.++.+++.|.+||+
T Consensus 166 ~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~-----~~~gH~~~--~~~~~~~~~~~i~~fl~ 238 (290)
T 3ksr_A 166 NLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVI-----AGADHALS--VKEHQQEYTRALIDWLT 238 (290)
T ss_dssp CHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSSEEEEEEE-----TTCCTTCC--SHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCCCceEEEc-----CCCCCCCC--cchHHHHHHHHHHHHHH
Confidence 11112456688999999999999999999999999997754 567777 89999422 23456889999999998
Q ss_pred hh
Q 011833 472 RH 473 (476)
Q Consensus 472 ~~ 473 (476)
++
T Consensus 239 ~~ 240 (290)
T 3ksr_A 239 EM 240 (290)
T ss_dssp HH
T ss_pred HH
Confidence 75
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=206.36 Aligned_cols=250 Identities=12% Similarity=0.154 Sum_probs=153.5
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccch
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQS 171 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 171 (476)
..+|+|||+||++++...| ..++..|+++||+|+++|+||||.|.....
T Consensus 10 ~~~~~vvllHG~~~~~~~~-----~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-------------------------- 58 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAWCW-----YKIVALMRSSGHNVTALDLGASGINPKQAL-------------------------- 58 (267)
T ss_dssp CCCCEEEEECCTTCCGGGG-----HHHHHHHHHTTCEEEEECCTTSTTCSCCGG--------------------------
T ss_pred CCCCeEEEECCCCCCcchH-----HHHHHHHHhcCCeEEEeccccCCCCCCcCC--------------------------
Confidence 4579999999999999999 589999999999999999999999976432
Q ss_pred hhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCC
Q 011833 172 KSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPK 251 (476)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~ 251 (476)
..+++++++ +|+.++++.+ + .
T Consensus 59 -----------------------------------------------------~~~~~~~~~-~~~~~~l~~l----~-~ 79 (267)
T 3sty_A 59 -----------------------------------------------------QIPNFSDYL-SPLMEFMASL----P-A 79 (267)
T ss_dssp -----------------------------------------------------GCCSHHHHH-HHHHHHHHTS----C-T
T ss_pred -----------------------------------------------------ccCCHHHHH-HHHHHHHHhc----C-C
Confidence 024556666 6776666654 1 1
Q ss_pred CCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh--hHHHh--hcCcchhhhccCCcCChHHHHH
Q 011833 252 DGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS--LLRLL--LPLSDPIQALNVPVIPLGTFLA 327 (476)
Q Consensus 252 ~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 327 (476)
.++++++||||||.+++.++.++| ++|+++|++++......... ....+ .........+...
T Consensus 80 ~~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 145 (267)
T 3sty_A 80 NEKIILVGHALGGLAISKAMETFP-----EKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYE--------- 145 (267)
T ss_dssp TSCEEEEEETTHHHHHHHHHHHSG-----GGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECT---------
T ss_pred CCCEEEEEEcHHHHHHHHHHHhCh-----hhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhh---------
Confidence 348999999999999999999988 89999999998654332210 01111 0000000000000
Q ss_pred hhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccc---cCCcccccccCCCCcc
Q 011833 328 AIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCD---RSGTFFYKDHIGKTNV 404 (476)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~l~~i~v 404 (476)
..... ........++.+...+. ...+......+........... .... .........++
T Consensus 146 ---~~~~~-----------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 207 (267)
T 3sty_A 146 ---NGPTN-----------PPTTLIAGPKFLATNVY---HLSPIEDLALATALVRPLYLYLAEDISKE-VVLSSKRYGSV 207 (267)
T ss_dssp ---TCTTS-----------CCCEEECCHHHHHHHTS---TTSCHHHHHHHHHHCCCEECCCHHHHHHH-CCCCTTTGGGS
T ss_pred ---hhhhc-----------ccchhhhhHHHHHHhhc---ccCCHHHHHHHHHhhccchhHHHHHhhcc-hhcccccccCC
Confidence 00000 00000111222222111 1111111111111111000000 0000 00011222379
Q ss_pred cEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 405 PVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 405 PvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
|+|+|+|++|.++|++..+++.+.+++. +++++ +++||..+ .+.|+++.+.|.+|++++
T Consensus 208 P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 208 KRVFIVATENDALKKEFLKLMIEKNPPD--EVKEI-----EGSDHVTM---MSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp CEEEEECCCSCHHHHHHHHHHHHHSCCS--EEEEC-----TTCCSCHH---HHSHHHHHHHHHHHHHHC
T ss_pred CEEEEEeCCCCccCHHHHHHHHHhCCCc--eEEEe-----CCCCcccc---ccChHHHHHHHHHHHHhc
Confidence 9999999999999999999999999875 77777 89999654 678899999999999876
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.2e-24 Score=203.88 Aligned_cols=255 Identities=12% Similarity=0.032 Sum_probs=161.1
Q ss_pred CceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccc
Q 011833 75 SDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITS 154 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~ 154 (476)
+|.++.+..+.+. .+|+|||+||++++...| ..+++.|++ +|+|+++|+||||.|+....
T Consensus 7 ~g~~l~~~~~g~~-----~~~~vv~lHG~~~~~~~~-----~~~~~~L~~-~~~v~~~D~~G~G~S~~~~~--------- 66 (264)
T 3ibt_A 7 NGTLMTYSESGDP-----HAPTLFLLSGWCQDHRLF-----KNLAPLLAR-DFHVICPDWRGHDAKQTDSG--------- 66 (264)
T ss_dssp TTEECCEEEESCS-----SSCEEEEECCTTCCGGGG-----TTHHHHHTT-TSEEEEECCTTCSTTCCCCS---------
T ss_pred CCeEEEEEEeCCC-----CCCeEEEEcCCCCcHhHH-----HHHHHHHHh-cCcEEEEccccCCCCCCCcc---------
Confidence 8888988876432 368999999999999999 689999965 59999999999999976321
Q ss_pred cccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhh
Q 011833 155 ANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLE 234 (476)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (476)
.+++++++
T Consensus 67 -----------------------------------------------------------------------~~~~~~~~- 74 (264)
T 3ibt_A 67 -----------------------------------------------------------------------DFDSQTLA- 74 (264)
T ss_dssp -----------------------------------------------------------------------CCCHHHHH-
T ss_pred -----------------------------------------------------------------------ccCHHHHH-
Confidence 35666666
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC-CCCCCcccccEEEEecccccccCChhhHHHhhcCcchhh
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC-GFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQ 313 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~-p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~ 313 (476)
+|+.++++.+ +. ++++++||||||.+++.+|.++ | ++|+++|++++.. .........+........
T Consensus 75 ~~~~~~l~~l----~~--~~~~lvGhS~Gg~ia~~~a~~~~p-----~~v~~lvl~~~~~--~~~~~~~~~~~~~~~~~~ 141 (264)
T 3ibt_A 75 QDLLAFIDAK----GI--RDFQMVSTSHGCWVNIDVCEQLGA-----ARLPKTIIIDWLL--QPHPGFWQQLAEGQHPTE 141 (264)
T ss_dssp HHHHHHHHHT----TC--CSEEEEEETTHHHHHHHHHHHSCT-----TTSCEEEEESCCS--SCCHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHhc----CC--CceEEEecchhHHHHHHHHHhhCh-----hhhheEEEecCCC--CcChhhcchhhcccChhh
Confidence 6777777655 32 3899999999999999999998 8 8899999999877 222112222211100000
Q ss_pred hccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcc
Q 011833 314 ALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTF 393 (476)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 393 (476)
.. ......+...+.. ..+++..+.+.... ...+..........+...... ..
T Consensus 142 --------~~-------------~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~ 193 (264)
T 3ibt_A 142 --------YV-------------AGRQSFFDEWAET--TDNADVLNHLRNEM-PWFHGEMWQRACREIEANYRT----WG 193 (264)
T ss_dssp --------HH-------------HHHHHHHHHHHTT--CCCHHHHHHHHHTG-GGSCHHHHHHHHHHHHHHHHH----HS
T ss_pred --------HH-------------HHHHHHHHHhccc--CCcHHHHHHHHHhh-hhccchhHHHHHHHhccchhh----cc
Confidence 00 0000111111111 12333333322211 122222222211111111000 00
Q ss_pred cccccCCCCcccEEEEee--CCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHH
Q 011833 394 FYKDHIGKTNVPVLALAA--DQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLT 471 (476)
Q Consensus 394 ~~~~~l~~i~vPvLii~G--~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~ 471 (476)
...+.+.++++|+|+++| ++|..++++..+.+.+.+++. +++++ +++||+.+ .+.|+++.+.|.+||+
T Consensus 194 ~~~~~l~~i~~P~lii~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 194 SPLDRMDSLPQKPEICHIYSQPLSQDYRQLQLEFAAGHSWF--HPRHI-----PGRTHFPS---LENPVAVAQAIREFLQ 263 (264)
T ss_dssp SHHHHHHTCSSCCEEEEEECCSCCHHHHHHHHHHHHHCTTE--EEEEC-----CCSSSCHH---HHCHHHHHHHHHHHTC
T ss_pred chhhcccccCCCeEEEEecCCccchhhHHHHHHHHHhCCCc--eEEEc-----CCCCCcch---hhCHHHHHHHHHHHHh
Confidence 112467889999999965 555566678888999999875 67777 89999544 6788999999999986
Q ss_pred h
Q 011833 472 R 472 (476)
Q Consensus 472 ~ 472 (476)
+
T Consensus 264 ~ 264 (264)
T 3ibt_A 264 A 264 (264)
T ss_dssp -
T ss_pred C
Confidence 3
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.7e-25 Score=211.63 Aligned_cols=251 Identities=17% Similarity=0.171 Sum_probs=151.4
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhh
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKS 173 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (476)
+|+|||+||++++...| ..++..|++ +|+|+++|+||||.|+.....
T Consensus 20 ~~~vvllHG~~~~~~~w-----~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~--------------------------- 66 (271)
T 1wom_A 20 KASIMFAPGFGCDQSVW-----NAVAPAFEE-DHRVILFDYVGSGHSDLRAYD--------------------------- 66 (271)
T ss_dssp SSEEEEECCTTCCGGGG-----TTTGGGGTT-TSEEEECCCSCCSSSCCTTCC---------------------------
T ss_pred CCcEEEEcCCCCchhhH-----HHHHHHHHh-cCeEEEECCCCCCCCCCCccc---------------------------
Confidence 47899999999999999 578888876 699999999999999653210
Q ss_pred hHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCC
Q 011833 174 QLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDG 253 (476)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ 253 (476)
+ ...+++++++ +|+.++++.+ +. +
T Consensus 67 -------------------------~------------------------~~~~~~~~~a-~dl~~~l~~l----~~--~ 90 (271)
T 1wom_A 67 -------------------------L------------------------NRYQTLDGYA-QDVLDVCEAL----DL--K 90 (271)
T ss_dssp -------------------------T------------------------TGGGSHHHHH-HHHHHHHHHT----TC--S
T ss_pred -------------------------c------------------------cccccHHHHH-HHHHHHHHHc----CC--C
Confidence 0 0013556666 7887777655 22 4
Q ss_pred cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccCC
Q 011833 254 KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFA 333 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (476)
++++|||||||.+++.+|.++| ++|+++|++++......... . ........ ....++..+....
T Consensus 91 ~~~lvGhS~GG~va~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~--~-~~~~~~~~--------~~~~~~~~~~~~~ 154 (271)
T 1wom_A 91 ETVFVGHSVGALIGMLASIRRP-----ELFSHLVMVGPSPCYLNDPP--E-YYGGFEEE--------QLLGLLEMMEKNY 154 (271)
T ss_dssp CEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCSCCBEETT--T-EECSBCHH--------HHHHHHHHHHHCH
T ss_pred CeEEEEeCHHHHHHHHHHHhCH-----HhhcceEEEcCCCcCCCCCc--h-hccCCCHH--------HHHHHHHHHhhhH
Confidence 8999999999999999999988 89999999987532111000 0 00000000 0000010000000
Q ss_pred CCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeCC
Q 011833 334 SSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQ 413 (476)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~ 413 (476)
..+........... ...++..+.+.... ..........+...... .+....+.++++|+|+|+|++
T Consensus 155 --~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~l~~i~~P~lvi~G~~ 220 (271)
T 1wom_A 155 --IGWATVFAATVLNQ--PDRPEIKEELESRF-CSTDPVIARQFAKAAFF---------SDHREDLSKVTVPSLILQCAD 220 (271)
T ss_dssp --HHHHHHHHHHHHCC--TTCHHHHHHHHHHH-HHSCHHHHHHHHHHHHS---------CCCHHHHTTCCSCEEEEEEET
T ss_pred --HHHHHHHHHHHhcC--CCchHHHHHHHHHH-hcCCcHHHHHHHHHHhC---------cchHHhccccCCCEEEEEcCC
Confidence 00000000001111 11222222221110 00111111111111110 112235778999999999999
Q ss_pred CCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 414 DLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 414 D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
|.++|++.++.+.+.+++. +++++ +++||+.+ .+.|+++.+.|.+||+++
T Consensus 221 D~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~~~~~i~~fl~~~ 270 (271)
T 1wom_A 221 DIIAPATVGKYMHQHLPYS--SLKQM-----EARGHCPH---MSHPDETIQLIGDYLKAH 270 (271)
T ss_dssp CSSSCHHHHHHHHHHSSSE--EEEEE-----EEESSCHH---HHCHHHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHCCCC--EEEEe-----CCCCcCcc---ccCHHHHHHHHHHHHHhc
Confidence 9999999999999999874 67777 89999554 677899999999999875
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=199.64 Aligned_cols=247 Identities=15% Similarity=0.165 Sum_probs=160.7
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.||.++.++.+.+.. ..+|+||++||++++...|.. ..+...|+++||.|+++|+||+|.|.....
T Consensus 19 ~~~g~~l~~~~~~~~~---~~~~~vv~~HG~~~~~~~~~~---~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~------- 85 (270)
T 3llc_A 19 GSDARSIAALVRAPAQ---DERPTCIWLGGYRSDMTGTKA---LEMDDLAASLGVGAIRFDYSGHGASGGAFR------- 85 (270)
T ss_dssp GGGCEEEEEEEECCSS---TTSCEEEEECCTTCCTTSHHH---HHHHHHHHHHTCEEEEECCTTSTTCCSCGG-------
T ss_pred ccCcceEEEEeccCCC---CCCCeEEEECCCccccccchH---HHHHHHHHhCCCcEEEeccccCCCCCCccc-------
Confidence 5699999988775432 237999999999988766520 246778888999999999999999965321
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.++++++
T Consensus 86 -------------------------------------------------------------------------~~~~~~~ 92 (270)
T 3llc_A 86 -------------------------------------------------------------------------DGTISRW 92 (270)
T ss_dssp -------------------------------------------------------------------------GCCHHHH
T ss_pred -------------------------------------------------------------------------cccHHHH
Confidence 2455666
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhc---CCCCCCcccccEEEEecccccccCChhhHHHhhcCc
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSH---CGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLS 309 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~---~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~ 309 (476)
+ +|+.++++++. .++++++||||||.+++.++.+ +|-. ..+|+++|++++...+.... ..
T Consensus 93 ~-~d~~~~~~~l~------~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~--~~~v~~~il~~~~~~~~~~~-----~~--- 155 (270)
T 3llc_A 93 L-EEALAVLDHFK------PEKAILVGSSMGGWIALRLIQELKARHDN--PTQVSGMVLIAPAPDFTSDL-----IE--- 155 (270)
T ss_dssp H-HHHHHHHHHHC------CSEEEEEEETHHHHHHHHHHHHHHTCSCC--SCEEEEEEEESCCTTHHHHT-----TG---
T ss_pred H-HHHHHHHHHhc------cCCeEEEEeChHHHHHHHHHHHHHhcccc--ccccceeEEecCcccchhhh-----hh---
Confidence 6 78888888773 3489999999999999999998 7500 05799999999876432210 00
Q ss_pred chhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhc-CCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccc
Q 011833 310 DPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLIS-APDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCD 388 (476)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (476)
..+. ......+...... ...... ..+......+......
T Consensus 156 ---------------------~~~~-~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~----- 195 (270)
T 3llc_A 156 ---------------------PLLG-DRERAELAENGYFEEVSEYS-------------PEPNIFTRALMEDGRA----- 195 (270)
T ss_dssp ---------------------GGCC-HHHHHHHHHHSEEEECCTTC-------------SSCEEEEHHHHHHHHH-----
T ss_pred ---------------------hhhh-hhhhhhhhccCcccChhhcc-------------cchhHHHHHHHhhhhh-----
Confidence 0000 0000000000000 000000 0000000111111110
Q ss_pred cCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHH
Q 011833 389 RSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIE 468 (476)
Q Consensus 389 ~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~ 468 (476)
......+.++++|+|+++|++|.++|.+.++++.+.+++..++++++ +++||. +...+.++++.+.|.+
T Consensus 196 ----~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~-----~~~gH~--~~~~~~~~~~~~~i~~ 264 (270)
T 3llc_A 196 ----NRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPADDVVLTLV-----RDGDHR--LSRPQDIDRMRNAIRA 264 (270)
T ss_dssp ----TCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTSCSSSEEEEEE-----TTCCSS--CCSHHHHHHHHHHHHH
T ss_pred ----hhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCCeeEEEe-----CCCccc--ccccccHHHHHHHHHH
Confidence 11124678899999999999999999999999999998755688887 899993 3334667899999999
Q ss_pred HHHhh
Q 011833 469 FLTRH 473 (476)
Q Consensus 469 fL~~~ 473 (476)
||+++
T Consensus 265 fl~~~ 269 (270)
T 3llc_A 265 MIEPR 269 (270)
T ss_dssp HHC--
T ss_pred HhcCC
Confidence 99864
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.4e-24 Score=208.88 Aligned_cols=258 Identities=17% Similarity=0.197 Sum_probs=162.3
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
+..++.+ +|..+.+..+.+ +|+||++||++++...| ..+++.|++ ||.|+++|+||+|.|.....
T Consensus 49 ~~~~~~~--~~~~~~~~~~g~-------~p~vv~lhG~~~~~~~~-----~~~~~~L~~-~~~v~~~D~~G~G~S~~~~~ 113 (314)
T 3kxp_A 49 ISRRVDI--GRITLNVREKGS-------GPLMLFFHGITSNSAVF-----EPLMIRLSD-RFTTIAVDQRGHGLSDKPET 113 (314)
T ss_dssp EEEEEEC--SSCEEEEEEECC-------SSEEEEECCTTCCGGGG-----HHHHHTTTT-TSEEEEECCTTSTTSCCCSS
T ss_pred ceeeEEE--CCEEEEEEecCC-------CCEEEEECCCCCCHHHH-----HHHHHHHHc-CCeEEEEeCCCcCCCCCCCC
Confidence 4445554 898888876632 58999999999999888 578888877 69999999999999963221
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
T Consensus 114 -------------------------------------------------------------------------------- 113 (314)
T 3kxp_A 114 -------------------------------------------------------------------------------- 113 (314)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHh
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLL 305 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~ 305 (476)
.+++++++ +|+.++++.+. . ++++++||||||.+++.++.++| .+|+++|++++........ ...+
T Consensus 114 ~~~~~~~~-~dl~~~l~~l~----~--~~v~lvG~S~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~--~~~~ 179 (314)
T 3kxp_A 114 GYEANDYA-DDIAGLIRTLA----R--GHAILVGHSLGARNSVTAAAKYP-----DLVRSVVAIDFTPYIETEA--LDAL 179 (314)
T ss_dssp CCSHHHHH-HHHHHHHHHHT----S--SCEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCTTCCHHH--HHHH
T ss_pred CCCHHHHH-HHHHHHHHHhC----C--CCcEEEEECchHHHHHHHHHhCh-----hheeEEEEeCCCCCCCcch--hhHH
Confidence 24556666 77777777662 2 48999999999999999999987 7899999998865333211 1111
Q ss_pred hcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCC--------CCHHHHHHH
Q 011833 306 LPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGN--------IPTKLISQL 377 (476)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 377 (476)
..... ...............+... ......+....+....... ........+
T Consensus 180 ~~~~~-----------------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
T 3kxp_A 180 EARVN-----------------AGSQLFEDIKAVEAYLAGR---YPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQT 239 (314)
T ss_dssp HHHTT-----------------TTCSCBSSHHHHHHHHHHH---STTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHH
T ss_pred HHHhh-----------------hchhhhcCHHHHHHHHHhh---cccCchHHHHHHhhhhhcccccccccccChhhhhhh
Confidence 00000 0000000000000101000 1111122222211111000 000000000
Q ss_pred HHHHHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccC
Q 011833 378 TTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRL 457 (476)
Q Consensus 378 ~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~ 457 (476)
.... .....+.+.++++|+|+++|++|.++|++.++++.+.+++. ++.++ +++||+.+ .+
T Consensus 240 ~~~~----------~~~~~~~~~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~g~gH~~~---~e 299 (314)
T 3kxp_A 240 ARGL----------RSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPDL--PVVVV-----PGADHYVN---EV 299 (314)
T ss_dssp HHHT----------TSCCHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHCTTS--CEEEE-----TTCCSCHH---HH
T ss_pred cccc----------CcchhhHhhcCCCCEEEEecCCCccCCHHHHHHHHHhCCCc--eEEEc-----CCCCCcch---hh
Confidence 0000 00223356789999999999999999999999999999875 67777 89999544 56
Q ss_pred CccchhHHHHHHHHh
Q 011833 458 AAYQVYPCIIEFLTR 472 (476)
Q Consensus 458 ~~~~v~~~i~~fL~~ 472 (476)
.++.+.+.|.+||++
T Consensus 300 ~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 300 SPEITLKAITNFIDA 314 (314)
T ss_dssp CHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhC
Confidence 789999999999974
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.1e-24 Score=207.19 Aligned_cols=252 Identities=15% Similarity=0.180 Sum_probs=148.6
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhh
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKS 173 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (476)
+++|||+||++.+...| ..+++.|+++||+|+++|+||||.|+....
T Consensus 4 ~~~vvllHG~~~~~~~w-----~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~---------------------------- 50 (273)
T 1xkl_A 4 GKHFVLVHGACHGGWSW-----YKLKPLLEAAGHKVTALDLAASGTDLRKIE---------------------------- 50 (273)
T ss_dssp CCEEEEECCTTCCGGGG-----TTHHHHHHHTTCEEEECCCTTSTTCCCCGG----------------------------
T ss_pred CCeEEEECCCCCCcchH-----HHHHHHHHhCCCEEEEecCCCCCCCccCcc----------------------------
Confidence 58999999999999999 689999999999999999999999965321
Q ss_pred hHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCC
Q 011833 174 QLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDG 253 (476)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ 253 (476)
..|++++++ +|+.++++.+ +. .+
T Consensus 51 ---------------------------------------------------~~~~~~~~a-~dl~~~l~~l----~~-~~ 73 (273)
T 1xkl_A 51 ---------------------------------------------------ELRTLYDYT-LPLMELMESL----SA-DE 73 (273)
T ss_dssp ---------------------------------------------------GCCSHHHHH-HHHHHHHHTS----CS-SS
T ss_pred ---------------------------------------------------cccCHHHHH-HHHHHHHHHh----cc-CC
Confidence 025667776 7777776654 21 13
Q ss_pred cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC-Ch-hhHHHhhcCcchhhhccCCcCChHHHHHhhcc
Q 011833 254 KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP-SN-SLLRLLLPLSDPIQALNVPVIPLGTFLAAIHP 331 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (476)
++++|||||||.+++.++.++| ++|+++|++++...... .. .....+.......... .....
T Consensus 74 ~~~lvGhSmGG~va~~~a~~~P-----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 137 (273)
T 1xkl_A 74 KVILVGHSLGGMNLGLAMEKYP-----QKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWL-----------DTQFL 137 (273)
T ss_dssp CEEEEEETTHHHHHHHHHHHCG-----GGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTT-----------TCEEE
T ss_pred CEEEEecCHHHHHHHHHHHhCh-----HhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHH-----------HHHHh
Confidence 8999999999999999999988 89999999997432111 10 0011110000000000 00000
Q ss_pred CCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC-cc--ccCCcccccccCCCCcccEEE
Q 011833 332 FASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG-LC--DRSGTFFYKDHIGKTNVPVLA 408 (476)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~g~~~~~~~l~~i~vPvLi 408 (476)
...... .........++.+..... ...+.... .+........ .. .......+. .....++|+|+
T Consensus 138 ~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~l~ 204 (273)
T 1xkl_A 138 PYGSPE--------EPLTSMFFGPKFLAHKLY---QLCSPEDL-ALASSLVRPSSLFMEDLSKAKYFT-DERFGSVKRVY 204 (273)
T ss_dssp ECSCTT--------SCCEEEECCHHHHHHHTS---TTSCHHHH-HHHHHHCCCBCCCHHHHHHCCCCC-TTTGGGSCEEE
T ss_pred hccCCC--------CCccccccCHHHHHHHhh---ccCCHHHH-HHHHHhcCCCchhhhhhhcccccc-hhhhCCCCeEE
Confidence 000000 000000001111111100 00011000 0111000000 00 000000000 01124789999
Q ss_pred EeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 409 LAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 409 i~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
|+|++|.++|++..+++.+.+++. +++++ +++||..+ .+.|+++.+.|.+|+++..
T Consensus 205 i~G~~D~~~p~~~~~~~~~~~p~~--~~~~i-----~~aGH~~~---~e~P~~~~~~i~~fl~~~~ 260 (273)
T 1xkl_A 205 IVCTEDKGIPEEFQRWQIDNIGVT--EAIEI-----KGADHMAM---LCEPQKLCASLLEIAHKYN 260 (273)
T ss_dssp EEETTCTTTTHHHHHHHHHHHCCS--EEEEE-----TTCCSCHH---HHSHHHHHHHHHHHHHHCC
T ss_pred EEeCCccCCCHHHHHHHHHhCCCC--eEEEe-----CCCCCCch---hcCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999876 67777 89999554 7889999999999998754
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.91 E-value=6.5e-24 Score=204.15 Aligned_cols=277 Identities=11% Similarity=0.068 Sum_probs=168.7
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccccc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEF 146 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~ 146 (476)
..++.+ +|.++++..+. ++|+|||+||++++...| ..+++.|++ +|+|+++|+||||.|......
T Consensus 10 ~~~~~~--~g~~l~~~~~g-------~~~~vv~lHG~~~~~~~~-----~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~ 74 (297)
T 2qvb_A 10 PKYLEI--AGKRMAYIDEG-------KGDAIVFQHGNPTSSYLW-----RNIMPHLEG-LGRLVACDLIGMGASDKLSPS 74 (297)
T ss_dssp CEEEEE--TTEEEEEEEES-------SSSEEEEECCTTCCGGGG-----TTTGGGGTT-SSEEEEECCTTSTTSCCCSSC
T ss_pred ceEEEE--CCEEEEEEecC-------CCCeEEEECCCCchHHHH-----HHHHHHHhh-cCeEEEEcCCCCCCCCCCCCc
Confidence 445554 89999988773 258999999999999999 578888876 499999999999999653210
Q ss_pred CccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccC
Q 011833 147 GEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKND 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
+ ...
T Consensus 75 ~----------------------------------------------------------------------------~~~ 78 (297)
T 2qvb_A 75 G----------------------------------------------------------------------------PDR 78 (297)
T ss_dssp S----------------------------------------------------------------------------TTS
T ss_pred c----------------------------------------------------------------------------ccC
Confidence 0 012
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCCh---h-hH
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSN---S-LL 302 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~---~-~~ 302 (476)
+++++++ +|+.++++.+ +. +++++++||||||.+++.++.++| .+|+++|++++........ . ..
T Consensus 79 ~~~~~~~-~~~~~~l~~~----~~-~~~~~lvG~S~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~ 147 (297)
T 2qvb_A 79 YSYGEQR-DFLFALWDAL----DL-GDHVVLVLHDWGSALGFDWANQHR-----DRVQGIAFMEAIVTPMTWADWPPAVR 147 (297)
T ss_dssp SCHHHHH-HHHHHHHHHT----TC-CSCEEEEEEEHHHHHHHHHHHHSG-----GGEEEEEEEEECCSCBCGGGSCGGGH
T ss_pred cCHHHHH-HHHHHHHHHc----CC-CCceEEEEeCchHHHHHHHHHhCh-----HhhheeeEeccccCCccCCCCChHHH
Confidence 5666666 6777777655 22 148999999999999999999987 7899999999866422110 0 00
Q ss_pred HHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCC-CCHHHHHHHHHHH
Q 011833 303 RLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGN-IPTKLISQLTTVF 381 (476)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 381 (476)
..+.. +..+. ...... ....++..++... ......++.+..+....... ........+...+
T Consensus 148 ~~~~~-------~~~~~--~~~~~~------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (297)
T 2qvb_A 148 GVFQG-------FRSPQ--GEPMAL------EHNIFVERVLPGA--ILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNL 210 (297)
T ss_dssp HHHHH-------HTSTT--HHHHHH------TTCHHHHTHHHHT--CSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHS
T ss_pred HHHHH-------Hhccc--chhhhc------cccHHHHHHHhcc--ccccCCHHHHHHHHHHhcCcccchhhHHHHHHhc
Confidence 00000 00000 000000 0001111111110 12233455554444322111 1222222222211
Q ss_pred HhCCcc-ccC-CcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCc
Q 011833 382 QEGGLC-DRS-GTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAA 459 (476)
Q Consensus 382 ~~~~~~-~~~-g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~ 459 (476)
...... ... ....+...+.++++|+|+|+|++|.++|++.++++.+.+++ +++++ ++||+.+ .+.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~------~~gH~~~---~~~p 278 (297)
T 2qvb_A 211 PIDGEPAEVVALVNEYRSWLEETDMPKLFINAEPGAIITGRIRDYVRSWPNQ---TEITV------PGVHFVQ---EDSP 278 (297)
T ss_dssp CBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHTSSSE---EEEEE------EESSCGG---GTCH
T ss_pred cccCCchhhHHHHHHHHhhcccccccEEEEecCCCCcCCHHHHHHHHHHcCC---eEEEe------cCccchh---hhCH
Confidence 100000 000 01122345678999999999999999999999999999885 45553 7889544 6778
Q ss_pred cchhHHHHHHHHhhc
Q 011833 460 YQVYPCIIEFLTRHD 474 (476)
Q Consensus 460 ~~v~~~i~~fL~~~~ 474 (476)
+++.+.|.+||+++.
T Consensus 279 ~~~~~~i~~fl~~~~ 293 (297)
T 2qvb_A 279 EEIGAAIAQFVRRLR 293 (297)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998763
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.91 E-value=5.7e-24 Score=199.10 Aligned_cols=228 Identities=14% Similarity=0.169 Sum_probs=157.0
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
.+++||++||++++...| ..+++.|+++||.|+++|+||+|.|......
T Consensus 21 ~~~~vv~~HG~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~-------------------------- 69 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPNDM-----NFMARALQRSGYGVYVPLFSGHGTVEPLDIL-------------------------- 69 (251)
T ss_dssp SSEEEEEECCTTCCGGGG-----HHHHHHHHHTTCEEEECCCTTCSSSCTHHHH--------------------------
T ss_pred CCceEEEeCCCCCCHHHH-----HHHHHHHHHCCCEEEecCCCCCCCCChhhhc--------------------------
Confidence 468999999999999999 5899999999999999999999998543210
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
. .++++++. +|+.++++++.+. .
T Consensus 70 ------------------------------------~----------------~~~~~~~~-~d~~~~i~~l~~~----~ 92 (251)
T 3dkr_A 70 ------------------------------------T----------------KGNPDIWW-AESSAAVAHMTAK----Y 92 (251)
T ss_dssp ------------------------------------H----------------HCCHHHHH-HHHHHHHHHHHTT----C
T ss_pred ------------------------------------C----------------cccHHHHH-HHHHHHHHHHHHh----c
Confidence 0 02445555 8999999999776 2
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccC
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPF 332 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (476)
++++++||||||.+++.++.++| ..++++++++|.......... .. . .+.
T Consensus 93 ~~~~l~G~S~Gg~~a~~~a~~~p-----~~~~~~i~~~p~~~~~~~~~~-~~-~-----------------~~~------ 142 (251)
T 3dkr_A 93 AKVFVFGLSLGGIFAMKALETLP-----GITAGGVFSSPILPGKHHLVP-GF-L-----------------KYA------ 142 (251)
T ss_dssp SEEEEEESHHHHHHHHHHHHHCS-----SCCEEEESSCCCCTTCBCHHH-HH-H-----------------HHH------
T ss_pred CCeEEEEechHHHHHHHHHHhCc-----cceeeEEEecchhhccchhhH-HH-H-----------------HHH------
Confidence 48999999999999999999987 689999998887654332100 00 0 000
Q ss_pred CCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeC
Q 011833 333 ASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAAD 412 (476)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~ 412 (476)
..+........ ..+.+.... ...+..+..... .....+.++++|+|+++|+
T Consensus 143 --------~~~~~~~~~~~--~~~~~~~~~--------~~~~~~~~~~~~-----------~~~~~~~~~~~P~l~i~g~ 193 (251)
T 3dkr_A 143 --------EYMNRLAGKSD--ESTQILAYL--------PGQLAAIDQFAT-----------TVAADLNLVKQPTFIGQAG 193 (251)
T ss_dssp --------HHHHHHHTCCC--CHHHHHHHH--------HHHHHHHHHHHH-----------HHHHTGGGCCSCEEEEEET
T ss_pred --------HHHHhhcccCc--chhhHHhhh--------HHHHHHHHHHHH-----------HHhccccccCCCEEEEecC
Confidence 00000000000 111111111 011111111110 0123567789999999999
Q ss_pred CCCcCCHHHHHHHHHhcCC-CceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 413 QDLICPTEAVYETVKLIPE-HLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 413 ~D~~vp~~~~~~~~~~l~~-~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
+|.++|++.++++.+.+++ ..++++++ +++||..+. ...++++.+.|.+||++..
T Consensus 194 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~gH~~~~--~~~~~~~~~~i~~fl~~~~ 249 (251)
T 3dkr_A 194 QDELVDGRLAYQLRDALINAARVDFHWY-----DDAKHVITV--NSAHHALEEDVIAFMQQEN 249 (251)
T ss_dssp TCSSBCTTHHHHHHHHCTTCSCEEEEEE-----TTCCSCTTT--STTHHHHHHHHHHHHHTTC
T ss_pred CCcccChHHHHHHHHHhcCCCCceEEEe-----CCCCccccc--ccchhHHHHHHHHHHHhhc
Confidence 9999999999999999998 66788887 899995442 2348999999999999864
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-24 Score=205.62 Aligned_cols=266 Identities=14% Similarity=0.181 Sum_probs=163.5
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
+.+++.+ +|.++.++.+.+ .+|+|||+||++++...| ..++..|.++||+|+++|+||+|.|.....
T Consensus 4 ~~~~~~~--~~~~~~~~~~~~------~~~~vv~lHG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 70 (279)
T 4g9e_A 4 NYHELET--SHGRIAVRESEG------EGAPLLMIHGNSSSGAIF-----APQLEGEIGKKWRVIAPDLPGHGKSTDAID 70 (279)
T ss_dssp EEEEEEE--TTEEEEEEECCC------CEEEEEEECCTTCCGGGG-----HHHHHSHHHHHEEEEEECCTTSTTSCCCSC
T ss_pred EEEEEEc--CCceEEEEecCC------CCCeEEEECCCCCchhHH-----HHHHhHHHhcCCeEEeecCCCCCCCCCCCC
Confidence 3456663 444777766522 368999999999999999 578888777899999999999999976321
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
. ..
T Consensus 71 ~-----------------------------------------------------------------------------~~ 73 (279)
T 4g9e_A 71 P-----------------------------------------------------------------------------DR 73 (279)
T ss_dssp H-----------------------------------------------------------------------------HH
T ss_pred c-----------------------------------------------------------------------------cc
Confidence 0 00
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHh
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLL 305 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~ 305 (476)
.+++++++ +|+.++++.+ +. ++++++||||||.+++.++.++| . +.++|+++++........ ..+
T Consensus 74 ~~~~~~~~-~~~~~~~~~~----~~--~~~~lvG~S~Gg~~a~~~a~~~p-----~-~~~~vl~~~~~~~~~~~~--~~~ 138 (279)
T 4g9e_A 74 SYSMEGYA-DAMTEVMQQL----GI--ADAVVFGWSLGGHIGIEMIARYP-----E-MRGLMITGTPPVAREEVG--QGF 138 (279)
T ss_dssp HSSHHHHH-HHHHHHHHHH----TC--CCCEEEEETHHHHHHHHHTTTCT-----T-CCEEEEESCCCCCGGGHH--HHB
T ss_pred CCCHHHHH-HHHHHHHHHh----CC--CceEEEEECchHHHHHHHHhhCC-----c-ceeEEEecCCCCCCCccc--hhh
Confidence 24555555 6777766655 32 38999999999999999999987 4 888999887654332211 111
Q ss_pred hcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC
Q 011833 306 LPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG 385 (476)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (476)
......... ....+ .......+....... ...+...+.+. .........+...+....
T Consensus 139 ~~~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 196 (279)
T 4g9e_A 139 KSGPDMALA-GQEIF--------------SERDVESYARSTCGE--PFEASLLDIVA-----RTDGRARRIMFEKFGSGT 196 (279)
T ss_dssp CCSTTGGGG-GCSCC--------------CHHHHHHHHHHHHCS--SCCHHHHHHHH-----HSCHHHHHHHHHHHHHTC
T ss_pred ccchhhhhc-Ccccc--------------cHHHHHHHHHhhccC--cccHHHHHHHH-----hhhccchHHHHHHhhccC
Confidence 100000000 00000 001111111111111 11222222221 111111222222222111
Q ss_pred ccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHH-HhcCCCceeEEEecCCCCCCCcccccccccCCccchhH
Q 011833 386 LCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETV-KLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 386 ~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
.......+.++++|+|+|+|++|.++|++.++.+. +.+++. +++++ +++||+.+ .+.++++.+
T Consensus 197 ------~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~~~p~~~~~ 260 (279)
T 4g9e_A 197 ------GGNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVKFGNLWEG--KTHVI-----DNAGHAPF---REAPAEFDA 260 (279)
T ss_dssp ------BCCHHHHHHHCCSCEEEEEETTCSSBCHHHHTTCCCSSBGGG--SCEEE-----TTCCSCHH---HHSHHHHHH
T ss_pred ------CchHHHHHHhcCCCEEEEEcCCCcccchHHHHHHhhccCCCC--eEEEE-----CCCCcchH---HhCHHHHHH
Confidence 12223356788999999999999999999998887 666654 67777 89999644 678899999
Q ss_pred HHHHHHHhhc
Q 011833 465 CIIEFLTRHD 474 (476)
Q Consensus 465 ~i~~fL~~~~ 474 (476)
.|.+||++..
T Consensus 261 ~i~~fl~~~~ 270 (279)
T 4g9e_A 261 YLARFIRDCT 270 (279)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998864
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-24 Score=206.67 Aligned_cols=242 Identities=15% Similarity=0.190 Sum_probs=163.3
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.+|..+.+. . +.+|+||++||++++...| ..+++.|+++||.|+++|+||+|.|.....
T Consensus 27 ~~~g~~~~~~---~-----g~~~~vv~~HG~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~------- 86 (270)
T 3rm3_A 27 VLSGAEPFYA---E-----NGPVGVLLVHGFTGTPHSM-----RPLAEAYAKAGYTVCLPRLKGHGTHYEDME------- 86 (270)
T ss_dssp CCTTCCCEEE---C-----CSSEEEEEECCTTCCGGGT-----HHHHHHHHHTTCEEEECCCTTCSSCHHHHH-------
T ss_pred CCCCCccccc---C-----CCCeEEEEECCCCCChhHH-----HHHHHHHHHCCCEEEEeCCCCCCCCccccc-------
Confidence 3477766543 2 2469999999999999888 589999999999999999999999854221
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.++++++
T Consensus 87 -------------------------------------------------------------------------~~~~~~~ 93 (270)
T 3rm3_A 87 -------------------------------------------------------------------------RTTFHDW 93 (270)
T ss_dssp -------------------------------------------------------------------------TCCHHHH
T ss_pred -------------------------------------------------------------------------cCCHHHH
Confidence 2455666
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchh
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPI 312 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~ 312 (476)
+ +|+.++++++.+. .++++++||||||.+++.++..+| . |+++|+++++....... ..+......
T Consensus 94 ~-~d~~~~i~~l~~~----~~~i~l~G~S~Gg~~a~~~a~~~p-----~-v~~~v~~~~~~~~~~~~---~~~~~~~~~- 158 (270)
T 3rm3_A 94 V-ASVEEGYGWLKQR----CQTIFVTGLSMGGTLTLYLAEHHP-----D-ICGIVPINAAVDIPAIA---AGMTGGGEL- 158 (270)
T ss_dssp H-HHHHHHHHHHHTT----CSEEEEEEETHHHHHHHHHHHHCT-----T-CCEEEEESCCSCCHHHH---HHSCC---C-
T ss_pred H-HHHHHHHHHHHhh----CCcEEEEEEcHhHHHHHHHHHhCC-----C-ccEEEEEcceecccccc---cchhcchhH-
Confidence 6 8999999999765 248999999999999999999987 5 99999999876543211 111000000
Q ss_pred hhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCc
Q 011833 313 QALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGT 392 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 392 (476)
..+..... ....... ... ..+...+...+..+.....
T Consensus 159 --------------~~~~~~~~----------~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~---------- 195 (270)
T 3rm3_A 159 --------------PRYLDSIG----------SDLKNPD-VKE--------LAYEKTPTASLLQLARLMA---------- 195 (270)
T ss_dssp --------------CSEEECCC----------CCCSCTT-CCC--------CCCSEEEHHHHHHHHHHHH----------
T ss_pred --------------HHHHHHhC----------ccccccc-hHh--------hcccccChhHHHHHHHHHH----------
Confidence 00000000 0000000 000 0001122222222222211
Q ss_pred ccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCc-cchhHHHHHHHH
Q 011833 393 FFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAA-YQVYPCIIEFLT 471 (476)
Q Consensus 393 ~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~-~~v~~~i~~fL~ 471 (476)
.+...+.++++|+|+++|++|.++|++.++++.+.+++.++++.++ +++||... .+.+ +++++.|.+||+
T Consensus 196 -~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~gH~~~---~~~~~~~~~~~i~~fl~ 266 (270)
T 3rm3_A 196 -QTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRL-----RNSYHVAT---LDYDQPMIIERSLEFFA 266 (270)
T ss_dssp -HHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCCSSEEEEEE-----SSCCSCGG---GSTTHHHHHHHHHHHHH
T ss_pred -HHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCCCcceEEEe-----CCCCcccc---cCccHHHHHHHHHHHHH
Confidence 1123567889999999999999999999999999999876788887 89999554 3444 889999999999
Q ss_pred hhc
Q 011833 472 RHD 474 (476)
Q Consensus 472 ~~~ 474 (476)
++.
T Consensus 267 ~~~ 269 (270)
T 3rm3_A 267 KHA 269 (270)
T ss_dssp HHC
T ss_pred hcC
Confidence 864
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-24 Score=204.02 Aligned_cols=251 Identities=15% Similarity=0.174 Sum_probs=155.4
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhh
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKS 173 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (476)
+|+|||+||++++...| ..+++.|++ ||+|+++|+||||.|.......
T Consensus 28 ~~~vv~lHG~~~~~~~~-----~~~~~~l~~-g~~v~~~d~~G~G~s~~~~~~~-------------------------- 75 (282)
T 3qvm_A 28 EKTVLLAHGFGCDQNMW-----RFMLPELEK-QFTVIVFDYVGSGQSDLESFST-------------------------- 75 (282)
T ss_dssp SCEEEEECCTTCCGGGG-----TTTHHHHHT-TSEEEECCCTTSTTSCGGGCCT--------------------------
T ss_pred CCeEEEECCCCCCcchH-----HHHHHHHhc-CceEEEEecCCCCCCCCCCCCc--------------------------
Confidence 48999999999999999 688999987 9999999999999997643100
Q ss_pred hHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCC
Q 011833 174 QLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDG 253 (476)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ 253 (476)
...+++++++ +|+.++++.+ +. +
T Consensus 76 --------------------------------------------------~~~~~~~~~~-~~~~~~~~~~----~~--~ 98 (282)
T 3qvm_A 76 --------------------------------------------------KRYSSLEGYA-KDVEEILVAL----DL--V 98 (282)
T ss_dssp --------------------------------------------------TGGGSHHHHH-HHHHHHHHHT----TC--C
T ss_pred --------------------------------------------------cccccHHHHH-HHHHHHHHHc----CC--C
Confidence 0012444545 6666666654 33 4
Q ss_pred cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccCC
Q 011833 254 KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFA 333 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (476)
+++++||||||.+++.++.++| .+|+++|++++........... ... ... .....+......
T Consensus 99 ~~~lvG~S~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~--~~~-~~~--------~~~~~~~~~~~~-- 160 (282)
T 3qvm_A 99 NVSIIGHSVSSIIAGIASTHVG-----DRISDITMICPSPCFMNFPPDY--VGG-FER--------DDLEELINLMDK-- 160 (282)
T ss_dssp SEEEEEETHHHHHHHHHHHHHG-----GGEEEEEEESCCSBSBEETTTE--ECS-BCH--------HHHHHHHHHHHH--
T ss_pred ceEEEEecccHHHHHHHHHhCc-----hhhheEEEecCcchhccCchhh--hch-hcc--------ccHHHHHHHHhc--
Confidence 8999999999999999999987 7899999999875433221000 000 000 000000000000
Q ss_pred CCch-HHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeC
Q 011833 334 SSPP-YVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAAD 412 (476)
Q Consensus 334 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~ 412 (476)
... +........... ...++....+.... ..........+...... ..+...+.++++|+|+++|+
T Consensus 161 -~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~P~l~i~g~ 227 (282)
T 3qvm_A 161 -NYIGWANYLAPLVMGA--SHSSELIGELSGSF-CTTDPIVAKTFAKATFF---------SDYRSLLEDISTPALIFQSA 227 (282)
T ss_dssp -CHHHHHHHHHHHHHCT--TSCHHHHHHHHHHH-HHSCHHHHHHHHHHHHS---------CBCGGGGGGCCSCEEEEEEE
T ss_pred -chhhHHHHHHhhccCC--ccchhhHHHHHHHH-hcCCcHHHHHHHHHHhc---------ccHHHHHhcCCCCeEEEEeC
Confidence 000 000011111111 11222222221111 11122222233222211 22234678899999999999
Q ss_pred CCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 413 QDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 413 ~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
+|.++|++.++.+.+.+++. +++++ +++||..+ .+.++++.+.|.+||+++.
T Consensus 228 ~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~~~~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 228 KDSLASPEVGQYMAENIPNS--QLELI-----QAEGHCLH---MTDAGLITPLLIHFIQNNQ 279 (282)
T ss_dssp ECTTCCHHHHHHHHHHSSSE--EEEEE-----EEESSCHH---HHCHHHHHHHHHHHHHHC-
T ss_pred CCCcCCHHHHHHHHHhCCCC--cEEEe-----cCCCCccc---ccCHHHHHHHHHHHHHhcC
Confidence 99999999999999999865 67777 89999654 5678999999999999864
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=208.31 Aligned_cols=69 Identities=20% Similarity=0.275 Sum_probs=58.8
Q ss_pred cccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhc----CCCceeEEEecCCCCCC-CcccccccccCCccchhHHHHHHH
Q 011833 396 KDHIGKTNVPVLALAADQDLICPTEAVYETVKLI----PEHLVSFKVFGEPRGPH-YAHYDLVGSRLAAYQVYPCIIEFL 470 (476)
Q Consensus 396 ~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l----~~~~~~~~v~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~fL 470 (476)
.+.+.++++|+|+|+|++|.++|++.++++.+.+ ++ .+++++ ++ +||+.+ .+.++++.+.|.+||
T Consensus 300 ~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~g~~--~~~~~i-----~~~~gH~~~---~e~p~~~~~~i~~fl 369 (377)
T 3i1i_A 300 EEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQGKY--AEVYEI-----ESINGHMAG---VFDIHLFEKKVYEFL 369 (377)
T ss_dssp HHHHHTCCSEEEEECBTTCSSSCTHHHHHHHHHHHHTTCC--EEECCB-----CCTTGGGHH---HHCGGGTHHHHHHHH
T ss_pred HHHHhhCCCCEEEEecCCccccCHHHHHHHHHHHHhcCCC--ceEEEc-----CCCCCCcch---hcCHHHHHHHHHHHH
Confidence 3467889999999999999999999999999999 65 367766 77 999655 577899999999999
Q ss_pred Hhhc
Q 011833 471 TRHD 474 (476)
Q Consensus 471 ~~~~ 474 (476)
+++-
T Consensus 370 ~~~~ 373 (377)
T 3i1i_A 370 NRKV 373 (377)
T ss_dssp HSCC
T ss_pred Hhhh
Confidence 8763
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.6e-23 Score=201.83 Aligned_cols=252 Identities=17% Similarity=0.255 Sum_probs=157.7
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCC-CCccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGA-GLSAHRV 144 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~-G~S~~~~ 144 (476)
+..++.+ +|.++.++.+.+ ..+++|||+||++++...| ..++..|++ ||+|+++|+||+ |.|....
T Consensus 46 ~~~~v~~--~~~~~~~~~~g~-----~~~~~vv~lHG~~~~~~~~-----~~~~~~L~~-g~~vi~~D~~G~gG~s~~~~ 112 (306)
T 2r11_A 46 KSFYIST--RFGQTHVIASGP-----EDAPPLVLLHGALFSSTMW-----YPNIADWSS-KYRTYAVDIIGDKNKSIPEN 112 (306)
T ss_dssp EEEEECC--TTEEEEEEEESC-----TTSCEEEEECCTTTCGGGG-----TTTHHHHHH-HSEEEEECCTTSSSSCEECS
T ss_pred ceEEEec--CCceEEEEeeCC-----CCCCeEEEECCCCCCHHHH-----HHHHHHHhc-CCEEEEecCCCCCCCCCCCC
Confidence 4556653 666787777533 2368999999999999999 688899987 999999999999 8775422
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
.
T Consensus 113 ~------------------------------------------------------------------------------- 113 (306)
T 2r11_A 113 V------------------------------------------------------------------------------- 113 (306)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh-hHH
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS-LLR 303 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~-~~~ 303 (476)
.+++++++ +|+.++++.+ +. ++++++||||||.+++.++.++| .+|+++|++++......... ...
T Consensus 114 -~~~~~~~~-~~l~~~l~~l----~~--~~~~lvG~S~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~ 180 (306)
T 2r11_A 114 -SGTRTDYA-NWLLDVFDNL----GI--EKSHMIGLSLGGLHTMNFLLRMP-----ERVKSAAILSPAETFLPFHHDFYK 180 (306)
T ss_dssp -CCCHHHHH-HHHHHHHHHT----TC--SSEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCSSBTSCCCHHHHH
T ss_pred -CCCHHHHH-HHHHHHHHhc----CC--CceeEEEECHHHHHHHHHHHhCc-----cceeeEEEEcCccccCcccHHHHH
Confidence 24555555 6777766654 33 48999999999999999999987 88999999998775433211 111
Q ss_pred HhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHh
Q 011833 304 LLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQE 383 (476)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (476)
...+ ... ............... ......+.. .......+.
T Consensus 181 ~~~~------------------------~~~-~~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~~~~~~- 220 (306)
T 2r11_A 181 YALG------------------------LTA-SNGVETFLNWMMNDQ-NVLHPIFVK-------------QFKAGVMWQ- 220 (306)
T ss_dssp HHHT------------------------TTS-TTHHHHHHHHHTTTC-CCSCHHHHH-------------HHHHHHHCC-
T ss_pred HHhH------------------------HHH-HHHHHHHHHHhhCCc-ccccccccc-------------ccHHHHHHH-
Confidence 1110 000 000000000111100 000010000 000000000
Q ss_pred CCccccC----C--cccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHH-hcCCCceeEEEecCCCCCCCccccccccc
Q 011833 384 GGLCDRS----G--TFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVK-LIPEHLVSFKVFGEPRGPHYAHYDLVGSR 456 (476)
Q Consensus 384 ~~~~~~~----g--~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~gH~~~~~~~ 456 (476)
..+..+. . .......+.++++|+|+++|++|.++|++.+.+..+ .+++. +++++ +++||+.+ .
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~ 290 (306)
T 2r11_A 221 DGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVPDI--EAEVI-----KNAGHVLS---M 290 (306)
T ss_dssp SSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHHHHHHHHHHSTTC--EEEEE-----TTCCTTHH---H
T ss_pred HhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHHHHHHHHHHCCCC--EEEEe-----CCCCCCCc---c
Confidence 0011110 0 111223577899999999999999999998886655 57754 77777 89999544 5
Q ss_pred CCccchhHHHHHHHHh
Q 011833 457 LAAYQVYPCIIEFLTR 472 (476)
Q Consensus 457 ~~~~~v~~~i~~fL~~ 472 (476)
+.++++.+.|.+||++
T Consensus 291 e~p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 291 EQPTYVNERVMRFFNA 306 (306)
T ss_dssp HSHHHHHHHHHHHHC-
T ss_pred cCHHHHHHHHHHHHhC
Confidence 6789999999999964
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-23 Score=204.24 Aligned_cols=67 Identities=13% Similarity=0.216 Sum_probs=53.5
Q ss_pred ccCCCCc-ccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 397 DHIGKTN-VPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 397 ~~l~~i~-vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
+.+.+++ +|||+|+|++|.++|++.++.+.+.+++. +++++ +++||... ..+.++++...|.+|+.+
T Consensus 250 ~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p~~--~~~~i-----~~~gH~~~--~~~~~~~~~~~i~~f~~~ 317 (317)
T 1wm1_A 250 RNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEA--ELHIV-----EGAGHSYD--EPGILHQLMIATDRFAGK 317 (317)
T ss_dssp HTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTTS--EEEEE-----TTCCSSTT--SHHHHHHHHHHHHHHTC-
T ss_pred hhcccccCCCEEEEEecCCCCCCHHHHHHHHhhCCCc--eEEEE-----CCCCCCCC--CcchHHHHHHHHHHHhcC
Confidence 3566785 99999999999999999999999999975 77777 89999532 223467888888888753
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8e-24 Score=207.15 Aligned_cols=260 Identities=15% Similarity=0.148 Sum_probs=154.3
Q ss_pred CCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcccccc
Q 011833 74 NSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMIT 153 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~ 153 (476)
.+|.++++..+.++ . .+|+|||+||++++...| ..++..|++ +|+|+++|+||||.|++...
T Consensus 11 ~~g~~l~y~~~~~G-~---~~p~vvllHG~~~~~~~w-----~~~~~~L~~-~~rvia~DlrGhG~S~~~~~-------- 72 (276)
T 2wj6_A 11 VFDNKLSYIDNQRD-T---DGPAILLLPGWCHDHRVY-----KYLIQELDA-DFRVIVPNWRGHGLSPSEVP-------- 72 (276)
T ss_dssp ETTEEEEEEECCCC-C---SSCEEEEECCTTCCGGGG-----HHHHHHHTT-TSCEEEECCTTCSSSCCCCC--------
T ss_pred eCCeEEEEEEecCC-C---CCCeEEEECCCCCcHHHH-----HHHHHHHhc-CCEEEEeCCCCCCCCCCCCC--------
Confidence 38999988765212 1 248899999999999999 578888874 69999999999999975321
Q ss_pred ccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhh
Q 011833 154 SANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYL 233 (476)
Q Consensus 154 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (476)
.|++++++
T Consensus 73 ------------------------------------------------------------------------~~~~~~~a 80 (276)
T 2wj6_A 73 ------------------------------------------------------------------------DFGYQEQV 80 (276)
T ss_dssp ------------------------------------------------------------------------CCCHHHHH
T ss_pred ------------------------------------------------------------------------CCCHHHHH
Confidence 36777777
Q ss_pred hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC-CCCCCcccccEEEEecccccccCChhhHHHhhcCcchh
Q 011833 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC-GFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPI 312 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~-p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~ 312 (476)
+|+.++++.+ +. +++++|||||||.+++.+|.++ | ++|+++|++++...... ......+.......
T Consensus 81 -~dl~~ll~~l----~~--~~~~lvGhSmGG~va~~~A~~~~P-----~rv~~lvl~~~~~~~~~-~~~~~~~~~~~~~~ 147 (276)
T 2wj6_A 81 -KDALEILDQL----GV--ETFLPVSHSHGGWVLVELLEQAGP-----ERAPRGIIMDWLMWAPK-PDFAKSLTLLKDPE 147 (276)
T ss_dssp -HHHHHHHHHH----TC--CSEEEEEEGGGHHHHHHHHHHHHH-----HHSCCEEEESCCCSSCC-HHHHHHHHHHHCTT
T ss_pred -HHHHHHHHHh----CC--CceEEEEECHHHHHHHHHHHHhCH-----HhhceEEEecccccCCC-chHHHHhhhccCcc
Confidence 8888888876 33 3899999999999999999998 8 89999999986432111 11111110000000
Q ss_pred hhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCc
Q 011833 313 QALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGT 392 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 392 (476)
. ....... +...|. .. ..+++..+.+. .................+.. .+...
T Consensus 148 ~--------~~~~~~~---------~~~~~~----~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~--- 199 (276)
T 2wj6_A 148 R--------WREGTHG---------LFDVWL----DG--HDEKRVRHHLL-EEMADYGYDCWGRSGRVIED-AYGRN--- 199 (276)
T ss_dssp T--------HHHHHHH---------HHHHHH----TT--BCCHHHHHHHH-TTTTTCCHHHHHHHHHHHHH-HHHHH---
T ss_pred h--------HHHHHHH---------HHHHhh----cc--cchHHHHHHHH-HHhhhcchhhhhhccchhHH-HHhhc---
Confidence 0 0000000 000111 00 01122222111 11111111111000000000 00000
Q ss_pred ccccccCCCCcccEEEEeeCCCCcCC--HHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHH
Q 011833 393 FFYKDHIGKTNVPVLALAADQDLICP--TEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFL 470 (476)
Q Consensus 393 ~~~~~~l~~i~vPvLii~G~~D~~vp--~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL 470 (476)
....+.+.++++|+++++|..|...+ ....+.+.+.+|+. +++++ +++||+. ..|.|++|.+.|.+||
T Consensus 200 ~~~~~~l~~i~~P~lv~~~~~~~~~~~~~~~~~~~~~~~p~a--~~~~i-----~~~gH~~---~~e~P~~~~~~i~~Fl 269 (276)
T 2wj6_A 200 GSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQHPWF--SYAKL-----GGPTHFP---AIDVPDRAAVHIREFA 269 (276)
T ss_dssp CCHHHHHHTCSSCCCEEEEECCSCSHHHHHHHHHHHHHCTTE--EEEEC-----CCSSSCH---HHHSHHHHHHHHHHHH
T ss_pred cchhhHHhhcCCCceEEEEecCccchhHHHHHHHHHhhCCCe--EEEEe-----CCCCCcc---cccCHHHHHHHHHHHH
Confidence 00112467789999998874433222 34567788889865 77777 8999954 4788999999999999
Q ss_pred Hhhc
Q 011833 471 TRHD 474 (476)
Q Consensus 471 ~~~~ 474 (476)
++..
T Consensus 270 ~~~~ 273 (276)
T 2wj6_A 270 TAIR 273 (276)
T ss_dssp HHHH
T ss_pred hhcc
Confidence 8653
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-23 Score=192.90 Aligned_cols=242 Identities=16% Similarity=0.200 Sum_probs=152.9
Q ss_pred ceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcccccccc
Q 011833 76 DWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSA 155 (476)
Q Consensus 76 G~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~ 155 (476)
|.++.+..+.+. +.+|+||++||++++...| . +...|+ +||+|+++|+||+|.|....
T Consensus 2 g~~l~y~~~g~~----~~~~~vv~~hG~~~~~~~~-----~-~~~~l~-~g~~v~~~d~~g~g~s~~~~----------- 59 (245)
T 3e0x_A 2 NAMLHYVHVGNK----KSPNTLLFVHGSGCNLKIF-----G-ELEKYL-EDYNCILLDLKGHGESKGQC----------- 59 (245)
T ss_dssp CCCCCEEEEECT----TCSCEEEEECCTTCCGGGG-----T-TGGGGC-TTSEEEEECCTTSTTCCSCC-----------
T ss_pred CceeEEEecCCC----CCCCEEEEEeCCcccHHHH-----H-HHHHHH-hCCEEEEecCCCCCCCCCCC-----------
Confidence 445556555432 2478999999999999988 5 566665 79999999999999996321
Q ss_pred ccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhc
Q 011833 156 NAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEE 235 (476)
Q Consensus 156 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (476)
.+++++++ +
T Consensus 60 ----------------------------------------------------------------------~~~~~~~~-~ 68 (245)
T 3e0x_A 60 ----------------------------------------------------------------------PSTVYGYI-D 68 (245)
T ss_dssp ----------------------------------------------------------------------CSSHHHHH-H
T ss_pred ----------------------------------------------------------------------CcCHHHHH-H
Confidence 24555555 6
Q ss_pred cHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhc-CCCCCCcccccEEEEecccccccCCh-hhHHHhhcCcchhh
Q 011833 236 DVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSH-CGFEGKDSGFASVTTLASSLDYRPSN-SLLRLLLPLSDPIQ 313 (476)
Q Consensus 236 Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~-~p~~~~~~~v~~lvlla~~~~~~~~~-~~~~~~~~~~~~~~ 313 (476)
|+.+++++.......+ +++++||||||.+++.++.+ +| . |+++|++++........ .....+.
T Consensus 69 ~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p-----~-v~~lvl~~~~~~~~~~~~~~~~~~~------- 133 (245)
T 3e0x_A 69 NVANFITNSEVTKHQK--NITLIGYSMGGAIVLGVALKKLP-----N-VRKVVSLSGGARFDKLDKDFMEKIY------- 133 (245)
T ss_dssp HHHHHHHHCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCT-----T-EEEEEEESCCSBCTTSCHHHHHHHH-------
T ss_pred HHHHHHHhhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCc-----c-ccEEEEecCCCccccccHHHHHHHH-------
Confidence 7777773332222222 89999999999999999999 88 5 99999999977653221 1111111
Q ss_pred hccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcc
Q 011833 314 ALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTF 393 (476)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 393 (476)
...... +..... ... ...+....+.... .. ............. ..
T Consensus 134 -----------------~~~~~~-----~~~~~~-~~~-~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~---------~~ 178 (245)
T 3e0x_A 134 -----------------HNQLDN-----NYLLEC-IGG-IDNPLSEKYFETL-EK-DPDIMINDLIACK---------LI 178 (245)
T ss_dssp -----------------TTCCCH-----HHHHHH-HTC-SCSHHHHHHHTTS-CS-SHHHHHHHHHHHH---------HC
T ss_pred -----------------HHHHHh-----hcCccc-ccc-cchHHHHHHHHHH-hc-CcHHHHHHHHHhc---------cc
Confidence 000000 000000 001 1111222221111 11 1111111111111 12
Q ss_pred cccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHH
Q 011833 394 FYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFL 470 (476)
Q Consensus 394 ~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL 470 (476)
...+.+.++++|+|+++|++|.++|++.++++.+.+++. +++++ +++||..+ .+.++++.+.|.+||
T Consensus 179 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 179 DLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVENS--ELKIF-----ETGKHFLL---VVNAKGVAEEIKNFI 245 (245)
T ss_dssp BCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSSSE--EEEEE-----SSCGGGHH---HHTHHHHHHHHHTTC
T ss_pred cHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCc--eEEEe-----CCCCcceE---EecHHHHHHHHHhhC
Confidence 223467889999999999999999999999999999864 77777 89999654 567888999988885
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8.5e-24 Score=214.71 Aligned_cols=294 Identities=14% Similarity=0.114 Sum_probs=170.8
Q ss_pred CCCceEEEEEEEcCCCC----CCCCCCcEEEecCCCCCcceeecCCCCCHHHHHH----hCCC---cEEEecCCCCCCcc
Q 011833 73 PNSDWRLALWRYLPSPA----APQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMS----GQGF---DTWILEVRGAGLSA 141 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~----~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~----~~Gy---~V~~~D~rG~G~S~ 141 (476)
+.||.+|+++.+.|... ..+.+|+|||+||++++...| ..++..|+ +.|| +|+++|+||||.|.
T Consensus 27 ~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~~-----~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~ 101 (398)
T 2y6u_A 27 ATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVVW-----EYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSA 101 (398)
T ss_dssp TTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGGG-----GGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHH
T ss_pred CCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHHH-----HHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCC
Confidence 67999999999876531 112357999999999999999 57888888 3489 99999999999996
Q ss_pred cccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhc
Q 011833 142 HRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDL 221 (476)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (476)
......
T Consensus 102 ~~~~~~-------------------------------------------------------------------------- 107 (398)
T 2y6u_A 102 VRNRGR-------------------------------------------------------------------------- 107 (398)
T ss_dssp HHTTTT--------------------------------------------------------------------------
T ss_pred CCCccc--------------------------------------------------------------------------
Confidence 532100
Q ss_pred ccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhh
Q 011833 222 IVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSL 301 (476)
Q Consensus 222 ~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~ 301 (476)
....+++++++ +|+.++++.+....+.+..+++++||||||.+++.++.++| .+|+++|++++..........
T Consensus 108 -~~~~~~~~~~~-~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~ 180 (398)
T 2y6u_A 108 -LGTNFNWIDGA-RDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQP-----NLFHLLILIEPVVITRKAIGA 180 (398)
T ss_dssp -BCSCCCHHHHH-HHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCT-----TSCSEEEEESCCCSCCCCCSC
T ss_pred -cCCCCCcchHH-HHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCc-----hheeEEEEecccccccccccc
Confidence 00135666766 78887777653211222224999999999999999999988 789999999987654210000
Q ss_pred HHHhhcCcchhhhccCCcCChHHHHHhhccCC----CCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCC-----CHH
Q 011833 302 LRLLLPLSDPIQALNVPVIPLGTFLAAIHPFA----SSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNI-----PTK 372 (476)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 372 (476)
.....+. ..... ...+...+.... ........++... ......+++.++.+........ +..
T Consensus 181 ~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (398)
T 2y6u_A 181 GRPGLPP-------DSPQI-PENLYNSLRLKTCDHFANESEYVKYMRNG-SFFTNAHSQILQNIIDFERTKASGDDEDGG 251 (398)
T ss_dssp CCTTCCT-------TCCCC-CHHHHHHHHHTCCCEESSHHHHHHHHHHT-STTTTSCHHHHHHHHHHHEEC--------C
T ss_pred ccccccc-------ccccc-chhhHHHhhhhccccCCCHHHHHHHhhcC-cccccCCHHHHHHHHHhcCccccccccCCC
Confidence 0000000 00000 000111111000 0001111111110 0011123333333322110000 000
Q ss_pred ----HHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCc
Q 011833 373 ----LISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYA 448 (476)
Q Consensus 373 ----~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~g 448 (476)
.+.....+..-..+. .........+.++++|+|+|+|++|.++|++.++.+.+.+++. +++++ +++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~~~--~~~~~-----~~~g 322 (398)
T 2y6u_A 252 PVRTKMEQAQNLLCYMNMQ--TFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQNY--HLDVI-----PGGS 322 (398)
T ss_dssp CEEESSCHHHHHHTTSCGG--GTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCSSE--EEEEE-----TTCC
T ss_pred ceEecCCchhhhhhhcccc--cchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCCCc--eEEEe-----CCCC
Confidence 000000000000000 0011122467889999999999999999999999999999864 77777 8999
Q ss_pred ccccccccCCccchhHHHHHHHHhh
Q 011833 449 HYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 449 H~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
|+.+ .+.++++.+.|.+||+++
T Consensus 323 H~~~---~e~p~~~~~~i~~fl~~~ 344 (398)
T 2y6u_A 323 HLVN---VEAPDLVIERINHHIHEF 344 (398)
T ss_dssp TTHH---HHSHHHHHHHHHHHHHHH
T ss_pred ccch---hcCHHHHHHHHHHHHHHH
Confidence 9544 567899999999999865
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=199.70 Aligned_cols=241 Identities=17% Similarity=0.176 Sum_probs=142.3
Q ss_pred CC-cEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 94 NH-PLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 94 ~~-~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
++ +|||+||++++...| ..++..|+ .+|+|+++|+||||.|....
T Consensus 12 g~~~vvllHG~~~~~~~w-----~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~---------------------------- 57 (258)
T 1m33_A 12 GNVHLVLLHGWGLNAEVW-----RCIDEELS-SHFTLHLVDLPGFGRSRGFG---------------------------- 57 (258)
T ss_dssp CSSEEEEECCTTCCGGGG-----GGTHHHHH-TTSEEEEECCTTSTTCCSCC----------------------------
T ss_pred CCCeEEEECCCCCChHHH-----HHHHHHhh-cCcEEEEeeCCCCCCCCCCC----------------------------
Confidence 45 899999999999999 57888887 48999999999999996531
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
.+++++++ +.+.+..+
T Consensus 58 -----------------------------------------------------~~~~~~~~--------~~l~~~l~--- 73 (258)
T 1m33_A 58 -----------------------------------------------------ALSLADMA--------EAVLQQAP--- 73 (258)
T ss_dssp -----------------------------------------------------CCCHHHHH--------HHHHTTSC---
T ss_pred -----------------------------------------------------CcCHHHHH--------HHHHHHhC---
Confidence 13333333 33333333
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccC
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPF 332 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (476)
++++++||||||.+++.+|.++| ++|+++|++++........... . .... . ...+...+...
T Consensus 74 ~~~~lvGhS~Gg~va~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~-~----~~~~-~-------~~~~~~~~~~~ 135 (258)
T 1m33_A 74 DKAIWLGWSLGGLVASQIALTHP-----ERVRALVTVASSPCFSARDEWP-G----IKPD-V-------LAGFQQQLSDD 135 (258)
T ss_dssp SSEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCSCCBCBTTBC-S----BCHH-H-------HHHHHHHHHHH
T ss_pred CCeEEEEECHHHHHHHHHHHHhh-----HhhceEEEECCCCCcccccccc-C----CCHH-H-------HHHHHHHHhcc
Confidence 48999999999999999999998 8999999998753222110000 0 0000 0 00000000000
Q ss_pred CCCchHHHHHHHHhhcCCCCCCHHHHHHH---hhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEE
Q 011833 333 ASSPPYVLSWLKFLISAPDMMHPELFEKL---IFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLAL 409 (476)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii 409 (476)
. ...+..++.... .......+..+.+ ..... ......+......+.. .+..+.+.++++|+|+|
T Consensus 136 ~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~l~~i~~P~l~i 202 (258)
T 1m33_A 136 Q--QRTVERFLALQT-MGTETARQDARALKKTVLALP-MPEVDVLNGGLEILKT---------VDLRQPLQNVSMPFLRL 202 (258)
T ss_dssp H--HHHHHHHHHTTS-TTSTTHHHHHHHHHHHHHTSC-CCCHHHHHHHHHHHHH---------CCCTTGGGGCCSCEEEE
T ss_pred H--HHHHHHHHHHHh-cCCccchhhHHHHHHHHHhcc-CCcHHHHHHHHHHHHh---------CCHHHHHhhCCCCEEEE
Confidence 0 000000110000 0000011111111 11110 1111111111111111 11234577899999999
Q ss_pred eeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 410 AADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 410 ~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
+|++|.++|++.++.+.+.+++. +++++ +++||..+ .+.|+++.+.|.+||++.
T Consensus 203 ~G~~D~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~~~~~i~~fl~~~ 256 (258)
T 1m33_A 203 YGYLDGLVPRKVVPMLDKLWPHS--ESYIF-----AKAAHAPF---ISHPAEFCHLLVALKQRV 256 (258)
T ss_dssp EETTCSSSCGGGCC-CTTTCTTC--EEEEE-----TTCCSCHH---HHSHHHHHHHHHHHHTTS
T ss_pred eecCCCCCCHHHHHHHHHhCccc--eEEEe-----CCCCCCcc---ccCHHHHHHHHHHHHHhc
Confidence 99999999999988888888875 67777 89999554 577899999999999864
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.90 E-value=6.3e-23 Score=198.61 Aligned_cols=267 Identities=13% Similarity=0.068 Sum_probs=156.7
Q ss_pred CCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcce-eecCCCC-CHHHHHHhCCCcEEEecCCCCCCcccccccCcccc
Q 011833 74 NSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIG-YDLSPEY-SFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSM 151 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~-~~~~~~~-~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~ 151 (476)
.+|.++.+..+.+.. ..+|+|||+||++++... |.. ... .+++.|++ +|+|+++|+||||.|.......
T Consensus 18 ~~~~~l~y~~~G~~~---~~~p~vvllHG~~~~~~~~~~~-~~~~~~~~~L~~-~~~vi~~D~~G~G~s~~~~~~~---- 88 (286)
T 2qmq_A 18 TPYGSVTFTVYGTPK---PKRPAIFTYHDVGLNYKSCFQP-LFRFGDMQEIIQ-NFVRVHVDAPGMEEGAPVFPLG---- 88 (286)
T ss_dssp ETTEEEEEEEESCCC---TTCCEEEEECCTTCCHHHHHHH-HHTSHHHHHHHT-TSCEEEEECTTTSTTCCCCCTT----
T ss_pred cCCeEEEEEeccCCC---CCCCeEEEeCCCCCCchhhhhh-hhhhchhHHHhc-CCCEEEecCCCCCCCCCCCCCC----
Confidence 389999998875431 246899999999999874 410 001 17778876 6999999999999885422100
Q ss_pred ccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchh
Q 011833 152 ITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDH 231 (476)
Q Consensus 152 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (476)
...+++++
T Consensus 89 ------------------------------------------------------------------------~~~~~~~~ 96 (286)
T 2qmq_A 89 ------------------------------------------------------------------------YQYPSLDQ 96 (286)
T ss_dssp ------------------------------------------------------------------------CCCCCHHH
T ss_pred ------------------------------------------------------------------------CCccCHHH
Confidence 00136666
Q ss_pred hhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcch
Q 011833 232 YLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDP 311 (476)
Q Consensus 232 ~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~ 311 (476)
++ +|+.++++.+ +. ++++++||||||.+++.++..+| .+|+++|++++...............
T Consensus 97 ~~-~~l~~~l~~l----~~--~~~~lvG~S~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~----- 159 (286)
T 2qmq_A 97 LA-DMIPCILQYL----NF--STIIGVGVGAGAYILSRYALNHP-----DTVEGLVLINIDPNAKGWMDWAAHKL----- 159 (286)
T ss_dssp HH-HTHHHHHHHH----TC--CCEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCCCCCCHHHHHHHHH-----
T ss_pred HH-HHHHHHHHHh----CC--CcEEEEEEChHHHHHHHHHHhCh-----hheeeEEEECCCCcccchhhhhhhhh-----
Confidence 66 7888888766 22 38999999999999999999987 78999999998654322111100000
Q ss_pred hhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCC
Q 011833 312 IQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSG 391 (476)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 391 (476)
.. ....+ ....+.. ++..... ..+++..+.+...............+...+.... .
T Consensus 160 -~~-~~~~~-~~~~~~~-------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 215 (286)
T 2qmq_A 160 -TG-LTSSI-PDMILGH-------------LFSQEEL---SGNSELIQKYRGIIQHAPNLENIELYWNSYNNRR-----D 215 (286)
T ss_dssp -HH-TTSCH-HHHHHHH-------------HSCHHHH---HTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCC-----C
T ss_pred -cc-ccccc-hHHHHHH-------------HhcCCCC---CcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhh-----h
Confidence 00 00000 0000000 0000000 0011222222111111122222233333332111 0
Q ss_pred cccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHH
Q 011833 392 TFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLT 471 (476)
Q Consensus 392 ~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~ 471 (476)
.......+.++++|+|+|+|++|.++| ...+.+.+.++. ..+++++ +++||+.+ .+.++++.+.|.+||+
T Consensus 216 ~~~~~~~l~~i~~P~lii~G~~D~~~~-~~~~~~~~~~~~-~~~~~~~-----~~~gH~~~---~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 216 LNFERGGETTLKCPVMLVVGDQAPHED-AVVECNSKLDPT-QTSFLKM-----ADSGGQPQ---LTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp CCSEETTEECCCSCEEEEEETTSTTHH-HHHHHHHHSCGG-GEEEEEE-----TTCTTCHH---HHCHHHHHHHHHHHHC
T ss_pred hhhhhchhccCCCCEEEEecCCCcccc-HHHHHHHHhcCC-CceEEEe-----CCCCCccc---ccChHHHHHHHHHHhc
Confidence 111134678899999999999999998 445555555542 3578887 89999554 5678999999999996
Q ss_pred h
Q 011833 472 R 472 (476)
Q Consensus 472 ~ 472 (476)
+
T Consensus 286 ~ 286 (286)
T 2qmq_A 286 G 286 (286)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-23 Score=208.93 Aligned_cols=262 Identities=13% Similarity=0.147 Sum_probs=153.7
Q ss_pred CceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccc
Q 011833 75 SDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITS 154 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~ 154 (476)
++..+.+..+.+ .+|+|||+||++++...| ..++..| ||+|+++|+||+|.|+....
T Consensus 68 ~~~~~~~~~~g~------~~~~vv~~hG~~~~~~~~-----~~~~~~l---g~~Vi~~D~~G~G~S~~~~~--------- 124 (330)
T 3p2m_A 68 QAGAISALRWGG------SAPRVIFLHGGGQNAHTW-----DTVIVGL---GEPALAVDLPGHGHSAWRED--------- 124 (330)
T ss_dssp EETTEEEEEESS------SCCSEEEECCTTCCGGGG-----HHHHHHS---CCCEEEECCTTSTTSCCCSS---------
T ss_pred cCceEEEEEeCC------CCCeEEEECCCCCccchH-----HHHHHHc---CCeEEEEcCCCCCCCCCCCC---------
Confidence 566688887743 258899999999999888 3555555 99999999999999974321
Q ss_pred cccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhh
Q 011833 155 ANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLE 234 (476)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (476)
..+++++++
T Consensus 125 ----------------------------------------------------------------------~~~~~~~~a- 133 (330)
T 3p2m_A 125 ----------------------------------------------------------------------GNYSPQLNS- 133 (330)
T ss_dssp ----------------------------------------------------------------------CBCCHHHHH-
T ss_pred ----------------------------------------------------------------------CCCCHHHHH-
Confidence 125555555
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhh
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQA 314 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~ 314 (476)
+|+.++++.+ +. ++++++||||||.+++.+|.++| .+|+++|++++....... ...+...... .
T Consensus 134 ~dl~~~l~~l----~~--~~v~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~---~~~~~~~~~~--~ 197 (330)
T 3p2m_A 134 ETLAPVLREL----AP--GAEFVVGMSLGGLTAIRLAAMAP-----DLVGELVLVDVTPSALQR---HAELTAEQRG--T 197 (330)
T ss_dssp HHHHHHHHHS----ST--TCCEEEEETHHHHHHHHHHHHCT-----TTCSEEEEESCCHHHHHH---HHHHTCC------
T ss_pred HHHHHHHHHh----CC--CCcEEEEECHhHHHHHHHHHhCh-----hhcceEEEEcCCCccchh---hhhhhhhhhh--h
Confidence 6777776654 33 38999999999999999999988 789999999975432111 0000000000 0
Q ss_pred ccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCccc
Q 011833 315 LNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFF 394 (476)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 394 (476)
...+.....+ ......+............+.+............... + ......+........
T Consensus 198 --------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~ 260 (330)
T 3p2m_A 198 --------VALMHGEREF----PSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGN---W--VWRYDAIRTFGDFAG 260 (330)
T ss_dssp ---------------CCB----SCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSC---E--EESSCCCSBCCCHHH
T ss_pred --------hhhhcCCccc----cCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCc---e--EEeechhhCccccHH
Confidence 0000000000 0000111111111111111211111111000000000 0 000000000000001
Q ss_pred ccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCcee-EEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 395 YKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVS-FKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 395 ~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~-~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
..+.+.++++|+|+|+|++|.++|++.++++.+.+++. + ++++ +++||..+ .+.++++.+.|.+||+++
T Consensus 261 ~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~~~~~--~~~~~i-----~~~gH~~~---~e~p~~~~~~i~~fl~~~ 330 (330)
T 3p2m_A 261 LWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRATHF--RGVHIV-----EKSGHSVQ---SDQPRALIEIVRGVLDTR 330 (330)
T ss_dssp HHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHCSSE--EEEEEE-----TTCCSCHH---HHCHHHHHHHHHHHTTC-
T ss_pred HHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC--eeEEEe-----CCCCCCcc---hhCHHHHHHHHHHHHhcC
Confidence 12356789999999999999999999999999999875 5 7776 89999554 678899999999999864
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.7e-23 Score=216.42 Aligned_cols=262 Identities=17% Similarity=0.165 Sum_probs=165.5
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.||..+.+..+. .+|+|||+||++++...| ..++..|+++||+|+++|+||+|.|+....
T Consensus 10 ~~dG~~l~y~~~G-------~gp~VV~lHG~~~~~~~~-----~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~~------- 70 (456)
T 3vdx_A 10 NSTSIDLYYEDHG-------TGVPVVLIHGFPLSGHSW-----ERQSAALLDAGYRVITYDRRGFGQSSQPTT------- 70 (456)
T ss_dssp TTEEEEEEEEEES-------SSEEEEEECCTTCCGGGG-----TTHHHHHHHHTEEEEEECCTTSTTSCCCSS-------
T ss_pred ccCCeEEEEEEeC-------CCCEEEEECCCCCcHHHH-----HHHHHHHHHCCcEEEEECCCCCCCCCCCCC-------
Confidence 6799999887662 358999999999999999 689999999999999999999999965321
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.++++++
T Consensus 71 -------------------------------------------------------------------------~~s~~~~ 77 (456)
T 3vdx_A 71 -------------------------------------------------------------------------GYDYDTF 77 (456)
T ss_dssp -------------------------------------------------------------------------CCSHHHH
T ss_pred -------------------------------------------------------------------------CCCHHHH
Confidence 3566666
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC-CCCCCcccccEEEEecccccccCChhhHHHhhcCcch
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC-GFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDP 311 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~-p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~ 311 (476)
+ +|+.++++++ + .++++++||||||.+++.+++.+ | .+|+++|++++...........
T Consensus 78 a-~dl~~~l~~l----~--~~~v~LvGhS~GG~ia~~~aa~~~p-----~~v~~lVli~~~~~~~~~~~~~--------- 136 (456)
T 3vdx_A 78 A-ADLNTVLETL----D--LQDAVLVGFSMGTGEVARYVSSYGT-----ARIAAVAFLASLEPFLLKTDDN--------- 136 (456)
T ss_dssp H-HHHHHHHHHH----T--CCSEEEEEEGGGGHHHHHHHHHHCS-----SSEEEEEEESCCCSCCBCCSSC---------
T ss_pred H-HHHHHHHHHh----C--CCCeEEEEECHHHHHHHHHHHhcch-----hheeEEEEeCCccccccccccc---------
Confidence 6 7888888876 2 24899999999999999888876 5 7899999999865432211000
Q ss_pred hhhccCCcCChHHHHHhhccCCC-C-chHHHHHHHHhhcCC----CCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC
Q 011833 312 IQALNVPVIPLGTFLAAIHPFAS-S-PPYVLSWLKFLISAP----DMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG 385 (476)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (476)
.........+..+..... . ..+...++....... .....+.+..+...............
T Consensus 137 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 202 (456)
T 3vdx_A 137 -----PDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAA--------- 202 (456)
T ss_dssp -----CSCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHG---------
T ss_pred -----ccccchHHHHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhh---------
Confidence 000000000110000000 0 001111111111111 11222222221111100000000000
Q ss_pred ccccCCcccccccCCCCcccEEEEeeCCCCcCCHH-HHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhH
Q 011833 386 LCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTE-AVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 386 ~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~-~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
+.. -..+..+.+.++++|+|+|+|++|.++|++ ..+.+.+.+++. +++++ +++||..+ .+.++.+.+
T Consensus 203 ~~~--~~~d~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~l~~~~~~~--~~~~i-----~gagH~~~---~e~p~~v~~ 270 (456)
T 3vdx_A 203 PTT--WYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSA--EYVEV-----EGAPHGLL---WTHAEEVNT 270 (456)
T ss_dssp GGG--TTCCCTTTSTTCCSCCEEEEETTCSSSCGGGTHHHHHHHCTTS--EEEEE-----TTCCSCTT---TTTHHHHHH
T ss_pred hhh--hhhhHHHHhhhCCCCEEEEEeCCCCCcCHHHHHHHHHHHCCCc--eEEEe-----CCCCCcch---hhCHHHHHH
Confidence 000 012233568899999999999999999998 677788888764 77777 89999543 578899999
Q ss_pred HHHHHHHhh
Q 011833 465 CIIEFLTRH 473 (476)
Q Consensus 465 ~i~~fL~~~ 473 (476)
.|.+||++.
T Consensus 271 ~I~~FL~~~ 279 (456)
T 3vdx_A 271 ALLAFLAKA 279 (456)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999875
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.8e-23 Score=199.95 Aligned_cols=275 Identities=12% Similarity=0.069 Sum_probs=164.2
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccC
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
.++.. ||.++.+..+. .+|+|||+||++++...| ..++..|++. |+|+++|+||||.|.......
T Consensus 12 ~~~~~--~g~~l~~~~~g-------~~~~vv~lHG~~~~~~~~-----~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~ 76 (302)
T 1mj5_A 12 KFIEI--KGRRMAYIDEG-------TGDPILFQHGNPTSSYLW-----RNIMPHCAGL-GRLIACDLIGMGDSDKLDPSG 76 (302)
T ss_dssp EEEEE--TTEEEEEEEES-------CSSEEEEECCTTCCGGGG-----TTTGGGGTTS-SEEEEECCTTSTTSCCCSSCS
T ss_pred eEEEE--CCEEEEEEEcC-------CCCEEEEECCCCCchhhh-----HHHHHHhccC-CeEEEEcCCCCCCCCCCCCCC
Confidence 34544 89999888763 258999999999999999 5788888765 899999999999996532100
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
...+
T Consensus 77 ----------------------------------------------------------------------------~~~~ 80 (302)
T 1mj5_A 77 ----------------------------------------------------------------------------PERY 80 (302)
T ss_dssp ----------------------------------------------------------------------------TTSS
T ss_pred ----------------------------------------------------------------------------cccc
Confidence 0125
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCCh---h-hHH
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSN---S-LLR 303 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~---~-~~~ 303 (476)
++++++ +|+.++++.+ +. +++++++||||||.+++.++.++| .+|+++|++++........ . ...
T Consensus 81 ~~~~~~-~~~~~~l~~l----~~-~~~~~lvG~S~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~ 149 (302)
T 1mj5_A 81 AYAEHR-DYLDALWEAL----DL-GDRVVLVVHDWGSALGFDWARRHR-----ERVQGIAYMEAIAMPIEWADFPEQDRD 149 (302)
T ss_dssp CHHHHH-HHHHHHHHHT----TC-TTCEEEEEEHHHHHHHHHHHHHTG-----GGEEEEEEEEECCSCBCGGGSCGGGHH
T ss_pred cHHHHH-HHHHHHHHHh----CC-CceEEEEEECCccHHHHHHHHHCH-----HHHhheeeecccCCchhhhhhhHHHHH
Confidence 666666 6777777665 22 148999999999999999999987 8899999999876422110 0 000
Q ss_pred HhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCC-CCHHHHHHHHHHHH
Q 011833 304 LLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGN-IPTKLISQLTTVFQ 382 (476)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 382 (476)
.+..+.. . ... .... ....++..++... ......++.+..+....... ........+...+.
T Consensus 150 ~~~~~~~-------~---~~~---~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (302)
T 1mj5_A 150 LFQAFRS-------Q---AGE---ELVL--QDNVFVEQVLPGL--ILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIP 212 (302)
T ss_dssp HHHHHHS-------T---THH---HHHT--TTCHHHHTHHHHT--SSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSC
T ss_pred HHHHHhc-------c---chh---hhhc--ChHHHHHHHHHhc--CcccCCHHHHHHHHHHhhcccccccchHHHHHhcc
Confidence 0000000 0 000 0000 0001111111110 11223344443333221111 11111111110000
Q ss_pred hC-Ccccc-CCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCcc
Q 011833 383 EG-GLCDR-SGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAY 460 (476)
Q Consensus 383 ~~-~~~~~-~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~ 460 (476)
.. ..... .....+...+.++++|+|+|+|++|.++|++.++++.+.+++ +++++ ++||+.+ .+.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~------~~gH~~~---~e~p~ 280 (302)
T 1mj5_A 213 IAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQ---TEITV------AGAHFIQ---EDSPD 280 (302)
T ss_dssp BTTBSHHHHHHHHHHHHHHTTCCSCEEEEEEEECSSSSHHHHHHHTTCSSE---EEEEE------EESSCGG---GTCHH
T ss_pred ccccchhhHHHHHHHHhhhhccCCCeEEEEeCCCCCCChHHHHHHHHhcCC---ceEEe------cCcCccc---ccCHH
Confidence 00 00000 001122346788999999999999999999999999998875 45553 7899543 67789
Q ss_pred chhHHHHHHHHhh
Q 011833 461 QVYPCIIEFLTRH 473 (476)
Q Consensus 461 ~v~~~i~~fL~~~ 473 (476)
++.+.|.+|+++.
T Consensus 281 ~~~~~i~~fl~~~ 293 (302)
T 1mj5_A 281 EIGAAIAAFVRRL 293 (302)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999875
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=194.40 Aligned_cols=205 Identities=14% Similarity=0.174 Sum_probs=153.9
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccccc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEF 146 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~ 146 (476)
...+. +.+| .+.++.+.|.. ..+|+||++||++.....+.......+++.|+++||.|+++|+||+|.|.....
T Consensus 25 ~~~~~-~~~g-~l~~~~~~p~~---~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~- 98 (249)
T 2i3d_A 25 EVIFN-GPAG-RLEGRYQPSKE---KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFD- 98 (249)
T ss_dssp EEEEE-ETTE-EEEEEEECCSS---TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCC-
T ss_pred EEEEE-CCCc-eEEEEEEcCCC---CCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC-
Confidence 55565 5677 89988887653 346889999998543322210000367889999999999999999999865321
Q ss_pred CccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccC
Q 011833 147 GEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKND 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
T Consensus 99 -------------------------------------------------------------------------------- 98 (249)
T 2i3d_A 99 -------------------------------------------------------------------------------- 98 (249)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhh
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLL 306 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~ 306 (476)
++++++ +|+.++++++.+... +..+++++||||||.+++.++..+| . |+++|++++......
T Consensus 99 ~~~~~~--~d~~~~i~~l~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p-----~-v~~~v~~~~~~~~~~--------- 160 (249)
T 2i3d_A 99 HGAGEL--SDAASALDWVQSLHP-DSKSCWVAGYSFGAWIGMQLLMRRP-----E-IEGFMSIAPQPNTYD--------- 160 (249)
T ss_dssp SSHHHH--HHHHHHHHHHHHHCT-TCCCEEEEEETHHHHHHHHHHHHCT-----T-EEEEEEESCCTTTSC---------
T ss_pred CccchH--HHHHHHHHHHHHhCC-CCCeEEEEEECHHHHHHHHHHhcCC-----C-ccEEEEEcCchhhhh---------
Confidence 122222 799999999988743 3358999999999999999999976 4 999999987642100
Q ss_pred cCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCc
Q 011833 307 PLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGL 386 (476)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (476)
T Consensus 161 -------------------------------------------------------------------------------- 160 (249)
T 2i3d_A 161 -------------------------------------------------------------------------------- 160 (249)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC---ceeEEEecCCCCCCCcccccccccCCccchh
Q 011833 387 CDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH---LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVY 463 (476)
Q Consensus 387 ~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~---~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~ 463 (476)
...+.++++|+|+++|++|.++|.+.++++.+.++.. .++++++ ++++|.. . +.+++++
T Consensus 161 ---------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~H~~---~-~~~~~~~ 222 (249)
T 2i3d_A 161 ---------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTL-----PGANHFF---N-GKVDELM 222 (249)
T ss_dssp ---------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEE-----TTCCTTC---T-TCHHHHH
T ss_pred ---------hhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEE-----CCCCccc---c-cCHHHHH
Confidence 0134568899999999999999999999999999842 4677777 8999943 2 4678999
Q ss_pred HHHHHHHHhh
Q 011833 464 PCIIEFLTRH 473 (476)
Q Consensus 464 ~~i~~fL~~~ 473 (476)
+.|.+||+++
T Consensus 223 ~~i~~fl~~~ 232 (249)
T 2i3d_A 223 GECEDYLDRR 232 (249)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999875
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=185.98 Aligned_cols=196 Identities=14% Similarity=0.200 Sum_probs=150.1
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCC--HHHHHHhCCCcEEEecCCCCCCc---
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYS--FARYMSGQGFDTWILEVRGAGLS--- 140 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~--l~~~L~~~Gy~V~~~D~rG~G~S--- 140 (476)
+..++.. ||.++.++.|.+.+ ++|+||++||++++...| .. ++..|+++||.|+++|+||+|.|
T Consensus 5 ~~~~~~~--~g~~l~~~~~~~~~----~~~~vv~~hG~~~~~~~~-----~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~ 73 (207)
T 3bdi_A 5 QEEFIDV--NGTRVFQRKMVTDS----NRRSIALFHGYSFTSMDW-----DKADLFNNYSKIGYNVYAPDYPGFGRSASS 73 (207)
T ss_dssp EEEEEEE--TTEEEEEEEECCTT----CCEEEEEECCTTCCGGGG-----GGGTHHHHHHTTTEEEEEECCTTSTTSCCC
T ss_pred eeEEEee--CCcEEEEEEEeccC----CCCeEEEECCCCCCcccc-----chHHHHHHHHhCCCeEEEEcCCcccccCcc
Confidence 3445554 99999998887654 478999999999999888 57 99999999999999999999998
Q ss_pred ccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhh
Q 011833 141 AHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLD 220 (476)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (476)
.....
T Consensus 74 ~~~~~--------------------------------------------------------------------------- 78 (207)
T 3bdi_A 74 EKYGI--------------------------------------------------------------------------- 78 (207)
T ss_dssp TTTCC---------------------------------------------------------------------------
T ss_pred cCCCC---------------------------------------------------------------------------
Confidence 33211
Q ss_pred cccccCC-CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCCh
Q 011833 221 LIVKNDW-DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSN 299 (476)
Q Consensus 221 ~~~~~~~-~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~ 299 (476)
.+ +++ |+.+.+..+.+..+. ++++++|||+||.+++.++.++| .++++++++++... ..
T Consensus 79 -----~~~~~~-----~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~-----~~~~~~v~~~~~~~-~~-- 138 (207)
T 3bdi_A 79 -----DRGDLK-----HAAEFIRDYLKANGV--ARSVIMGASMGGGMVIMTTLQYP-----DIVDGIIAVAPAWV-ES-- 138 (207)
T ss_dssp -----TTCCHH-----HHHHHHHHHHHHTTC--SSEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCSC-GG--
T ss_pred -----CcchHH-----HHHHHHHHHHHHcCC--CceEEEEECccHHHHHHHHHhCc-----hhheEEEEeCCccc-cc--
Confidence 12 222 333333444444443 48999999999999999999877 78999999988621 00
Q ss_pred hhHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHH
Q 011833 300 SLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTT 379 (476)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (476)
+
T Consensus 139 --------------------------------------~----------------------------------------- 139 (207)
T 3bdi_A 139 --------------------------------------L----------------------------------------- 139 (207)
T ss_dssp --------------------------------------G-----------------------------------------
T ss_pred --------------------------------------h-----------------------------------------
Confidence 0
Q ss_pred HHHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCc
Q 011833 380 VFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAA 459 (476)
Q Consensus 380 ~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~ 459 (476)
...+.++++|+++++|++|.++|++.++.+.+.+++. ++.++ ++++|..+ .+.+
T Consensus 140 ----------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~H~~~---~~~~ 193 (207)
T 3bdi_A 140 ----------------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASIISGS--RLEIV-----EGSGHPVY---IEKP 193 (207)
T ss_dssp ----------------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHSTTC--EEEEE-----TTCCSCHH---HHSH
T ss_pred ----------------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhcCCc--eEEEe-----CCCCCCcc---ccCH
Confidence 0123457899999999999999999999999999754 67777 89999644 4557
Q ss_pred cchhHHHHHHHHh
Q 011833 460 YQVYPCIIEFLTR 472 (476)
Q Consensus 460 ~~v~~~i~~fL~~ 472 (476)
+++.+.|.+||++
T Consensus 194 ~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 194 EEFVRITVDFLRN 206 (207)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhh
Confidence 8899999999975
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.90 E-value=6.3e-23 Score=204.94 Aligned_cols=303 Identities=14% Similarity=0.054 Sum_probs=162.7
Q ss_pred CceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcc-------------eeecCCCCCHHH---HHHhCCCcEEEecCCC--
Q 011833 75 SDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAI-------------GYDLSPEYSFAR---YMSGQGFDTWILEVRG-- 136 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~-------------~~~~~~~~~l~~---~L~~~Gy~V~~~D~rG-- 136 (476)
+|.++.+..+.+... ..+|+|||+||++++.. .| ..++. .|.++||+|+++|+||
T Consensus 29 ~g~~l~y~~~g~~~~--~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~l~~~g~~vi~~D~~G~~ 101 (366)
T 2pl5_A 29 SPVVIAYETYGTLSS--SKNNAILICHALSGDAHAAGYHSGSDKKPGWW-----DDYIGPGKSFDTNQYFIICSNVIGGC 101 (366)
T ss_dssp SSEEEEEEEEECCCT--TSCCEEEEECCSSCCSCCSSBSSTTCSSCCTT-----TTTEETTSSEETTTCEEEEECCTTCS
T ss_pred cCceeeEEeccCcCC--CCCceEEEecccCCcccccccccccccccchH-----HhhcCCcccccccccEEEEecCCCcc
Confidence 567888887754321 24689999999999987 56 35553 4557899999999999
Q ss_pred CCCcccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHH
Q 011833 137 AGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQ 216 (476)
Q Consensus 137 ~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (476)
+|.|....... .+| ..|..
T Consensus 102 ~G~s~~~~~~~-----------~~~--~~~~~------------------------------------------------ 120 (366)
T 2pl5_A 102 KGSSGPLSIHP-----------ETS--TPYGS------------------------------------------------ 120 (366)
T ss_dssp SSSSSTTSBCT-----------TTS--SBCGG------------------------------------------------
T ss_pred cCCCCCCCCCC-----------CCC--ccccC------------------------------------------------
Confidence 88885422100 000 00000
Q ss_pred hhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcE-eEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 217 KQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKL-LAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki-~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
....|++++++ +|+.++++.+ +. +++ +++||||||.+++.+|.++| .+|+++|++++....
T Consensus 121 ------~~~~~~~~~~~-~dl~~~l~~l----~~--~~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~ 182 (366)
T 2pl5_A 121 ------RFPFVSIQDMV-KAQKLLVESL----GI--EKLFCVAGGSMGGMQALEWSIAYP-----NSLSNCIVMASTAEH 182 (366)
T ss_dssp ------GSCCCCHHHHH-HHHHHHHHHT----TC--SSEEEEEEETHHHHHHHHHHHHST-----TSEEEEEEESCCSBC
T ss_pred ------CCCcccHHHHH-HHHHHHHHHc----CC--ceEEEEEEeCccHHHHHHHHHhCc-----HhhhheeEeccCccC
Confidence 00125666666 6777666654 33 388 89999999999999999988 789999999987654
Q ss_pred cCChhhH-HHhhcCc--chhhhc--cCCcCChHH-HHHhhcc--CCCCchHHHHHHHHhhcCCCC-CCHHHHHHHhhh--
Q 011833 296 RPSNSLL-RLLLPLS--DPIQAL--NVPVIPLGT-FLAAIHP--FASSPPYVLSWLKFLISAPDM-MHPELFEKLIFS-- 364 (476)
Q Consensus 296 ~~~~~~~-~~~~~~~--~~~~~~--~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-- 364 (476)
....... ......+ .+.... .....+... .+..... ..........++......... ...+....+...
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (366)
T 2pl5_A 183 SAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQG 262 (366)
T ss_dssp CHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTT
T ss_pred CCccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHH
Confidence 3211110 0000000 000000 000000000 0000000 000011111111110000000 000000001000
Q ss_pred --ccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEec
Q 011833 365 --NFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFG 440 (476)
Q Consensus 365 --~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~ 440 (476)
.........+..+...+...... ....+...+.++++|+|+|+|++|.++|++.++++.+.+++. ..+++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~- 338 (366)
T 2pl5_A 263 ESFVDRFDANSYIYVTKALDHYSLG---KGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVEL- 338 (366)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHCBCC---SHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEE-
T ss_pred HhhhcccChhHHHHHHhhhhhhccc---cccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEe-
Confidence 00111222222222222211110 001123367889999999999999999999999999999832 2466664
Q ss_pred CCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 441 EPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 441 ~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
.+++||+.+ .+.++++.+.|.+||+++
T Consensus 339 ---~~~~gH~~~---~e~p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 339 ---QSGEGHDSF---LLKNPKQIEILKGFLENP 365 (366)
T ss_dssp ---CCCBSSGGG---GSCCHHHHHHHHHHHHCC
T ss_pred ---CCCCCcchh---hcChhHHHHHHHHHHccC
Confidence 159999554 577899999999999875
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-23 Score=193.05 Aligned_cols=204 Identities=13% Similarity=0.112 Sum_probs=153.4
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.+|..+.++.+.|.. ++|+||++||++++...|.. ..+++.|+++||.|+++|+||+|.|......
T Consensus 18 ~~~g~~l~~~~~~p~~----~~p~vv~~hG~~~~~~~~~~---~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~------ 84 (223)
T 2o2g_A 18 SVGEVKLKGNLVIPNG----ATGIVLFAHGSGSSRYSPRN---RYVAEVLQQAGLATLLIDLLTQEEEEIDLRT------ 84 (223)
T ss_dssp EETTEEEEEEEECCTT----CCEEEEEECCTTCCTTCHHH---HHHHHHHHHHTCEEEEECSSCHHHHHHHHHH------
T ss_pred ecCCeEEEEEEecCCC----CceEEEEecCCCCCCCccch---HHHHHHHHHCCCEEEEEcCCCcCCCCccchh------
Confidence 4599999999987753 47899999999988875421 3678889999999999999999987542210
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
....++++++
T Consensus 85 ----------------------------------------------------------------------~~~~~~~~~~ 94 (223)
T 2o2g_A 85 ----------------------------------------------------------------------RHLRFDIGLL 94 (223)
T ss_dssp ----------------------------------------------------------------------CSSTTCHHHH
T ss_pred ----------------------------------------------------------------------hcccCcHHHH
Confidence 0012455565
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchh
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPI 312 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~ 312 (476)
. +|+.++++++......+..+++++||||||.+++.++..+| .+|+++|++++..+..
T Consensus 95 ~-~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-----~~v~~~v~~~~~~~~~---------------- 152 (223)
T 2o2g_A 95 A-SRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERP-----ETVQAVVSRGGRPDLA---------------- 152 (223)
T ss_dssp H-HHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCT-----TTEEEEEEESCCGGGC----------------
T ss_pred H-HHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCC-----CceEEEEEeCCCCCcC----------------
Confidence 5 79999999998876555569999999999999999999877 7899999988743200
Q ss_pred hhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCc
Q 011833 313 QALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGT 392 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 392 (476)
T Consensus 153 -------------------------------------------------------------------------------- 152 (223)
T 2o2g_A 153 -------------------------------------------------------------------------------- 152 (223)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 393 FFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 393 ~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
...+.++++|+++++|++|.++|.+..+.+.+..++ .++.++ ++++|. +...+.++++.+.|.+||++
T Consensus 153 ---~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~H~--~~~~~~~~~~~~~i~~fl~~ 220 (223)
T 2o2g_A 153 ---PSALPHVKAPTLLIVGGYDLPVIAMNEDALEQLQTS--KRLVII-----PRASHL--FEEPGALTAVAQLASEWFMH 220 (223)
T ss_dssp ---TTTGGGCCSCEEEEEETTCHHHHHHHHHHHHHCCSS--EEEEEE-----TTCCTT--CCSTTHHHHHHHHHHHHHHH
T ss_pred ---HHHHhcCCCCEEEEEccccCCCCHHHHHHHHhhCCC--eEEEEe-----CCCCcc--cCChHHHHHHHHHHHHHHHH
Confidence 013455789999999999999986655555444333 577777 899995 22234568899999999987
Q ss_pred h
Q 011833 473 H 473 (476)
Q Consensus 473 ~ 473 (476)
+
T Consensus 221 ~ 221 (223)
T 2o2g_A 221 Y 221 (223)
T ss_dssp H
T ss_pred h
Confidence 5
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=9.4e-23 Score=205.82 Aligned_cols=126 Identities=17% Similarity=0.247 Sum_probs=99.5
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccC
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
.++.+ +|.+++++.+.|.. ..+|+|||+||++++...| ..++..|+++||+|+++|+||+|.|......
T Consensus 6 ~~~~~--~g~~l~y~~~G~~~---~~~~~vv~~hG~~~~~~~~-----~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~- 74 (356)
T 2e3j_A 6 RILNC--RGTRIHAVADSPPD---QQGPLVVLLHGFPESWYSW-----RHQIPALAGAGYRVVAIDQRGYGRSSKYRVQ- 74 (356)
T ss_dssp EEEEE--TTEEEEEEEECCTT---CCSCEEEEECCTTCCGGGG-----TTTHHHHHHTTCEEEEECCTTSTTSCCCCSG-
T ss_pred EEEcc--CCeEEEEEEecCCC---CCCCEEEEECCCCCcHHHH-----HHHHHHHHHcCCEEEEEcCCCCCCCCCCCcc-
Confidence 44543 89999998876532 2468999999999999999 6889999999999999999999999653310
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
..+
T Consensus 75 -----------------------------------------------------------------------------~~~ 77 (356)
T 2e3j_A 75 -----------------------------------------------------------------------------KAY 77 (356)
T ss_dssp -----------------------------------------------------------------------------GGG
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 023
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
++++++ +|+.++++.+ +. ++++++||||||.+++.++.++| .+|+++|+++++.
T Consensus 78 ~~~~~~-~~~~~~~~~l----~~--~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 78 RIKELV-GDVVGVLDSY----GA--EQAFVVGHDWGAPVAWTFAWLHP-----DRCAGVVGISVPF 131 (356)
T ss_dssp SHHHHH-HHHHHHHHHT----TC--SCEEEEEETTHHHHHHHHHHHCG-----GGEEEEEEESSCC
T ss_pred CHHHHH-HHHHHHHHHc----CC--CCeEEEEECHhHHHHHHHHHhCc-----HhhcEEEEECCcc
Confidence 445555 6777777655 32 48999999999999999999987 7899999999765
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.90 E-value=9.3e-23 Score=199.98 Aligned_cols=126 Identities=13% Similarity=0.158 Sum_probs=90.8
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
+..++. ..||.++++..+.+. .+++|||+||++++...+ .+...+..+||+|+++|+||||.|++...
T Consensus 12 ~~~~~~-~~~g~~l~y~~~G~~-----~g~pvvllHG~~~~~~~~------~~~~~~~~~~~~vi~~D~~G~G~S~~~~~ 79 (313)
T 1azw_A 12 QQGSLK-VDDRHTLYFEQCGNP-----HGKPVVMLHGGPGGGCND------KMRRFHDPAKYRIVLFDQRGSGRSTPHAD 79 (313)
T ss_dssp EEEEEE-CSSSCEEEEEEEECT-----TSEEEEEECSTTTTCCCG------GGGGGSCTTTEEEEEECCTTSTTSBSTTC
T ss_pred ccceEE-cCCCCEEEEEecCCC-----CCCeEEEECCCCCccccH------HHHHhcCcCcceEEEECCCCCcCCCCCcc
Confidence 455666 468999988776421 247899999987655322 22334445799999999999999965321
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
. .
T Consensus 80 ~------------------------------------------------------------------------------~ 81 (313)
T 1azw_A 80 L------------------------------------------------------------------------------V 81 (313)
T ss_dssp C------------------------------------------------------------------------------T
T ss_pred c------------------------------------------------------------------------------c
Confidence 0 0
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
.+++++++ +|+.++++.+ +. +++++|||||||.+++.+|.++| .+|+++|++++..
T Consensus 82 ~~~~~~~~-~dl~~l~~~l----~~--~~~~lvGhSmGg~ia~~~a~~~p-----~~v~~lvl~~~~~ 137 (313)
T 1azw_A 82 DNTTWDLV-ADIERLRTHL----GV--DRWQVFGGSWGSTLALAYAQTHP-----QQVTELVLRGIFL 137 (313)
T ss_dssp TCCHHHHH-HHHHHHHHHT----TC--SSEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCC
T ss_pred cccHHHHH-HHHHHHHHHh----CC--CceEEEEECHHHHHHHHHHHhCh-----hheeEEEEecccc
Confidence 24555555 6776666654 33 38999999999999999999998 8999999998653
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4.7e-23 Score=205.51 Aligned_cols=273 Identities=15% Similarity=0.156 Sum_probs=157.3
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccC
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
.++.+ +|.++++....+ +.+|+|||+||++++...| ..++..|++. |+|+++|+||||.|++...
T Consensus 24 ~~~~~--~g~~l~y~~~G~-----g~~~~vvllHG~~~~~~~w-----~~~~~~L~~~-~~via~Dl~GhG~S~~~~~-- 88 (318)
T 2psd_A 24 KQMNV--LDSFINYYDSEK-----HAENAVIFLHGNATSSYLW-----RHVVPHIEPV-ARCIIPDLIGMGKSGKSGN-- 88 (318)
T ss_dssp EEEEE--TTEEEEEEECCS-----CTTSEEEEECCTTCCGGGG-----TTTGGGTTTT-SEEEEECCTTSTTCCCCTT--
T ss_pred eEEee--CCeEEEEEEcCC-----CCCCeEEEECCCCCcHHHH-----HHHHHHhhhc-CeEEEEeCCCCCCCCCCCC--
Confidence 45554 899888876532 2357999999999999999 5788888765 7999999999999965321
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
..|
T Consensus 89 -----------------------------------------------------------------------------~~~ 91 (318)
T 2psd_A 89 -----------------------------------------------------------------------------GSY 91 (318)
T ss_dssp -----------------------------------------------------------------------------SCC
T ss_pred -----------------------------------------------------------------------------Ccc
Confidence 125
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc----CChhhHH
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR----PSNSLLR 303 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~----~~~~~~~ 303 (476)
++++++ +|+.++++.+ +. ..++++|||||||.+++.+|.++| ++|+++|++++..... .......
T Consensus 92 ~~~~~a-~dl~~ll~~l----~~-~~~~~lvGhSmGg~ia~~~A~~~P-----~~v~~lvl~~~~~~~~~~~~~~~~~~~ 160 (318)
T 2psd_A 92 RLLDHY-KYLTAWFELL----NL-PKKIIFVGHDWGAALAFHYAYEHQ-----DRIKAIVHMESVVDVIESWDEWPDIEE 160 (318)
T ss_dssp SHHHHH-HHHHHHHTTS----CC-CSSEEEEEEEHHHHHHHHHHHHCT-----TSEEEEEEEEECCSCBSCCTTSCSCHH
T ss_pred CHHHHH-HHHHHHHHhc----CC-CCCeEEEEEChhHHHHHHHHHhCh-----HhhheEEEeccccCCccchhhhhhHHH
Confidence 666666 6776666643 33 148999999999999999999998 8999999988643211 0000000
Q ss_pred HhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCC-CCHHHHHHHHHHHH
Q 011833 304 LLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGN-IPTKLISQLTTVFQ 382 (476)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 382 (476)
.+..+.. +... ... .....+...++.... .....++.+..+....... ........|...+.
T Consensus 161 ~~~~~~~----------~~~~--~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (318)
T 2psd_A 161 DIALIKS----------EEGE--KMV---LENNFFVETVLPSKI--MRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIP 223 (318)
T ss_dssp HHHHHHS----------THHH--HHH---TTTCHHHHTHHHHTC--SSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCC
T ss_pred HHHHHhc----------ccch--hhh---hcchHHHHhhccccc--cccCCHHHHHHHHHhhcCccccccchhccccccc
Confidence 0000000 0000 000 000011111111100 1122333333332211100 00011111111000
Q ss_pred h-C-Ccccc-CCcccccccCCCC-cccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCC
Q 011833 383 E-G-GLCDR-SGTFFYKDHIGKT-NVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLA 458 (476)
Q Consensus 383 ~-~-~~~~~-~g~~~~~~~l~~i-~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~ 458 (476)
. + ..... .....+.+.+.++ ++|+|+|+|++| ++|+ .++++.+.+++. +++++ ++||+. ..+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D-~~~~-~~~~~~~~~~~~--~~~~i------~~gH~~---~~e~ 290 (318)
T 2psd_A 224 LVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESDPG-FFSN-AIVEGAKKFPNT--EFVKV------KGLHFL---QEDA 290 (318)
T ss_dssp BTTTSCHHHHHHHHHHHHHHHTCTTSCEEEEEEEEC-SSHH-HHHHHHTTSSSE--EEEEE------EESSSG---GGTC
T ss_pred ccccccchhHHHHHHHHHHhccccCCCeEEEEeccc-cCcH-HHHHHHHhCCCc--EEEEe------cCCCCC---HhhC
Confidence 0 0 00000 0000112345677 999999999999 8888 888999999875 56665 468943 4788
Q ss_pred ccchhHHHHHHHHhh
Q 011833 459 AYQVYPCIIEFLTRH 473 (476)
Q Consensus 459 ~~~v~~~i~~fL~~~ 473 (476)
|+++.+.|.+||++.
T Consensus 291 p~~~~~~i~~fl~~~ 305 (318)
T 2psd_A 291 PDEMGKYIKSFVERV 305 (318)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999865
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.1e-23 Score=199.35 Aligned_cols=245 Identities=10% Similarity=0.112 Sum_probs=136.9
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhh
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKS 173 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (476)
+|+|||+||++++...| ..++..|++.||+|+++|+||||.|.+..
T Consensus 16 ~~~vvllHG~~~~~~~w-----~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~----------------------------- 61 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGADW-----QPVLSHLARTQCAALTLDLPGHGTNPERH----------------------------- 61 (264)
T ss_dssp BCEEEEECCTTCCGGGG-----HHHHHHHTTSSCEEEEECCTTCSSCC--------------------------------
T ss_pred CCcEEEEcCCCCCHHHH-----HHHHHHhcccCceEEEecCCCCCCCCCCC-----------------------------
Confidence 48899999999999999 58899998689999999999999996421
Q ss_pred hHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCC
Q 011833 174 QLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDG 253 (476)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ 253 (476)
.+++++++ +|+.++++.+ +.+..
T Consensus 62 ----------------------------------------------------~~~~~~~a-~~l~~~l~~l----~~~~~ 84 (264)
T 1r3d_A 62 ----------------------------------------------------CDNFAEAV-EMIEQTVQAH----VTSEV 84 (264)
T ss_dssp --------------------------------------------------------CHHH-HHHHHHHHTT----CCTTS
T ss_pred ----------------------------------------------------ccCHHHHH-HHHHHHHHHh----CcCCC
Confidence 12344444 5665555533 33211
Q ss_pred cEeEEEEchHHHHHHH---HHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhc
Q 011833 254 KLLAVGHSMGGILLYA---MLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIH 330 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~---~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (476)
++++|||||||.+++. +|.++| .+|+++|++++................ . ......+.
T Consensus 85 p~~lvGhSmGG~va~~~~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~--~------------~~~~~~~~ 145 (264)
T 1r3d_A 85 PVILVGYSLGGRLIMHGLAQGAFSR-----LNLRGAIIEGGHFGLQENEEKAARWQH--D------------QQWAQRFS 145 (264)
T ss_dssp EEEEEEETHHHHHHHHHHHHTTTTT-----SEEEEEEEESCCCCCCSHHHHHHHHHH--H------------HHHHHHHH
T ss_pred ceEEEEECHhHHHHHHHHHHHhhCc-----cccceEEEecCCCCCCChhhhhhhhcc--c------------HHHHHHhc
Confidence 3999999999999999 777877 889999999875443221100000000 0 00000000
Q ss_pred cCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEe
Q 011833 331 PFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALA 410 (476)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~ 410 (476)
.. ........|..... .....++....+..... ........ .++....+.. .....+.+.++++|+|+|+
T Consensus 146 ~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~---~~~~~~~l~~i~~P~lii~ 215 (264)
T 1r3d_A 146 QQ-PIEHVLSDWYQQAV--FSSLNHEQRQTLIAQRS-ANLGSSVA---HMLLATSLAK---QPYLLPALQALKLPIHYVC 215 (264)
T ss_dssp HS-CHHHHHHHHTTSGG--GTTCCHHHHHHHHHHHT-TSCHHHHH---HHHHHTCGGG---CCCCHHHHHTCSSCEEEEE
T ss_pred cc-cHHHHHHHHhhhhh--hhccCHHHHHHHHHHHh-hcchHHHH---HHHHhhhhcc---CccHHHHHHhcCCCEEEEE
Confidence 00 00000001110000 00112222222211110 11111111 1111111110 1122345778999999999
Q ss_pred eCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 411 ADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 411 G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
|++|..++ .+.+.++ .+++++ +++||..+ .+.|+++.+.|.+||+++.
T Consensus 216 G~~D~~~~-----~~~~~~~---~~~~~i-----~~~gH~~~---~e~p~~~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 216 GEQDSKFQ-----QLAESSG---LSYSQV-----AQAGHNVH---HEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp ETTCHHHH-----HHHHHHC---SEEEEE-----TTCCSCHH---HHCHHHHHHHHHHHHHHHC
T ss_pred ECCCchHH-----HHHHHhC---CcEEEc-----CCCCCchh---hcCHHHHHHHHHHHHHHhc
Confidence 99998652 2334443 357776 89999544 6789999999999998764
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.89 E-value=9.6e-23 Score=200.98 Aligned_cols=282 Identities=17% Similarity=0.181 Sum_probs=156.0
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
+.+++.+ +|.++++... +.+++|||+||++++...| ..+...|+ .+|+|+++|+||||.|+++..
T Consensus 6 ~~~~~~~--~~~~~~~~~~-------g~g~~~vllHG~~~~~~~w-----~~~~~~l~-~~~~vi~~Dl~G~G~s~~~~~ 70 (291)
T 3qyj_A 6 EQTIVDT--TEARINLVKA-------GHGAPLLLLHGYPQTHVMW-----HKIAPLLA-NNFTVVATDLRGYGDSSRPAS 70 (291)
T ss_dssp EEEEEEC--SSCEEEEEEE-------CCSSEEEEECCTTCCGGGG-----TTTHHHHT-TTSEEEEECCTTSTTSCCCCC
T ss_pred ceeEEec--CCeEEEEEEc-------CCCCeEEEECCCCCCHHHH-----HHHHHHHh-CCCEEEEEcCCCCCCCCCCCC
Confidence 4455654 8999988764 2368999999999999999 67888886 589999999999999976432
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
.. . ..
T Consensus 71 ~~----------------------------------------------------~-----------------------~~ 75 (291)
T 3qyj_A 71 VP----------------------------------------------------H-----------------------HI 75 (291)
T ss_dssp CG----------------------------------------------------G-----------------------GG
T ss_pred Cc----------------------------------------------------c-----------------------cc
Confidence 00 0 01
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh-hHHH
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS-LLRL 304 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~-~~~~ 304 (476)
+|+++.++ +|+.++++.+ +. ++++++||||||.+++.++.++| .+|+++|++++......... ....
T Consensus 76 ~~~~~~~~-~~~~~~~~~l----~~--~~~~l~GhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~p~~~~~~~~~~~~ 143 (291)
T 3qyj_A 76 NYSKRVMA-QDQVEVMSKL----GY--EQFYVVGHDRGARVAHRLALDHP-----HRVKKLALLDIAPTHKMYRTTDQEF 143 (291)
T ss_dssp GGSHHHHH-HHHHHHHHHT----TC--SSEEEEEETHHHHHHHHHHHHCT-----TTEEEEEEESCCCHHHHHHTCCHHH
T ss_pred ccCHHHHH-HHHHHHHHHc----CC--CCEEEEEEChHHHHHHHHHHhCc-----hhccEEEEECCCCcchhhhcchhhh
Confidence 24455555 5666665544 32 38999999999999999999998 89999999975321100000 0000
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHh-
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQE- 383 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 383 (476)
.............+.++ ..++. . ....++...+...........++.+..+..... .+ .........+..
T Consensus 144 ~~~~~~~~~~~~~~~~~-~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~ 214 (291)
T 3qyj_A 144 ATAYYHWFFLIQPDNLP-ETLIG----A-NPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFS--QP-AVIHATCEDYRAA 214 (291)
T ss_dssp HHHTTHHHHTTCSTTHH-HHHHH----T-CHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHT--SH-HHHHHHHHHHHHH
T ss_pred hHHHHHHHHhccCCCch-HHHHc----C-CHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhc--CC-CcchhHHHHHHcc
Confidence 00000000000000000 00000 0 000011111111111122334555544432211 11 111111111110
Q ss_pred CCccccCCcccccccCCCCcccEEEEeeCCCCcCCH-HHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccch
Q 011833 384 GGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPT-EAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQV 462 (476)
Q Consensus 384 ~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~-~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v 462 (476)
.... ......+.+.++++|+|+|+|++|.+.+. .......+..++ ....++ ++|| +...|+|+++
T Consensus 215 ~~~~---~~~~~~~~~~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~--~~~~~~------~~GH---~~~~E~P~~v 280 (291)
T 3qyj_A 215 ATID---LEHDELDMKQKISCPVLVLWGEKGIIGRKYDVLATWRERAID--VSGQSL------PCGH---FLPEEAPEET 280 (291)
T ss_dssp TTHH---HHHHHTTTTCCBCSCEEEEEETTSSHHHHSCHHHHHHTTBSS--EEEEEE------SSSS---CHHHHSHHHH
T ss_pred cccc---hhhcchhcCCccccceEEEecccccccchhhHHHHHHhhcCC--cceeec------cCCC---CchhhCHHHH
Confidence 0000 00111235678999999999999987543 234444444443 466665 4899 4458999999
Q ss_pred hHHHHHHHHh
Q 011833 463 YPCIIEFLTR 472 (476)
Q Consensus 463 ~~~i~~fL~~ 472 (476)
.+.|.+||++
T Consensus 281 ~~~i~~fL~~ 290 (291)
T 3qyj_A 281 YQAIYNFLTH 290 (291)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 9999999974
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.8e-22 Score=182.90 Aligned_cols=197 Identities=19% Similarity=0.207 Sum_probs=149.6
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCC-----CCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGI-----GTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLS 140 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~-----~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S 140 (476)
+...+. +.|| ++.++.+.|... +++|+||++||+ ..+...| ..++..|+++||.|+++|+||+|.|
T Consensus 7 ~~~~~~-~~~g-~l~~~~~~p~~~--~~~~~vv~~HG~~~~~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~g~s 77 (208)
T 3trd_A 7 EDFLIQ-GPVG-QLEVMITRPKGI--EKSVTGIICHPHPLHGGTMNNKVV-----TTLAKALDELGLKTVRFNFRGVGKS 77 (208)
T ss_dssp SCEEEE-CSSS-EEEEEEECCSSC--CCSEEEEEECSCGGGTCCTTCHHH-----HHHHHHHHHTTCEEEEECCTTSTTC
T ss_pred ceEEEE-CCCc-eEEEEEEcCCCC--CCCCEEEEEcCCCCCCCccCCchH-----HHHHHHHHHCCCEEEEEecCCCCCC
Confidence 455666 6789 999999977542 357899999994 2333335 4788999999999999999999998
Q ss_pred ccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhh
Q 011833 141 AHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLD 220 (476)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (476)
.....
T Consensus 78 ~~~~~--------------------------------------------------------------------------- 82 (208)
T 3trd_A 78 QGRYD--------------------------------------------------------------------------- 82 (208)
T ss_dssp CSCCC---------------------------------------------------------------------------
T ss_pred CCCcc---------------------------------------------------------------------------
Confidence 65321
Q ss_pred cccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh
Q 011833 221 LIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS 300 (476)
Q Consensus 221 ~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~ 300 (476)
......+|+.++++++++..+. ++++++||||||.+++.++ .+ .+|+++|+++++.....
T Consensus 83 --------~~~~~~~d~~~~~~~l~~~~~~--~~i~l~G~S~Gg~~a~~~a-~~------~~v~~~v~~~~~~~~~~--- 142 (208)
T 3trd_A 83 --------NGVGEVEDLKAVLRWVEHHWSQ--DDIWLAGFSFGAYISAKVA-YD------QKVAQLISVAPPVFYEG--- 142 (208)
T ss_dssp --------TTTHHHHHHHHHHHHHHHHCTT--CEEEEEEETHHHHHHHHHH-HH------SCCSEEEEESCCTTSGG---
T ss_pred --------chHHHHHHHHHHHHHHHHhCCC--CeEEEEEeCHHHHHHHHHh-cc------CCccEEEEeccccccCC---
Confidence 0011247999999999888544 4999999999999999999 53 36999999887641000
Q ss_pred hHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHH
Q 011833 301 LLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTV 380 (476)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (476)
T Consensus 143 -------------------------------------------------------------------------------- 142 (208)
T 3trd_A 143 -------------------------------------------------------------------------------- 142 (208)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCcc
Q 011833 381 FQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAY 460 (476)
Q Consensus 381 ~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~ 460 (476)
...+..+++|+|+++|++|.++|++.++++.+.++.. ++++++ +++||.-. .+ .+
T Consensus 143 ---------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~H~~~---~~-~~ 197 (208)
T 3trd_A 143 ---------------FASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSP-VEFVVM-----SGASHFFH---GR-LI 197 (208)
T ss_dssp ---------------GTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSSC-CEEEEE-----TTCCSSCT---TC-HH
T ss_pred ---------------chhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccCc-eEEEEe-----CCCCCccc---cc-HH
Confidence 0123456899999999999999999999999999874 577877 89999432 33 37
Q ss_pred chhHHHHHHHH
Q 011833 461 QVYPCIIEFLT 471 (476)
Q Consensus 461 ~v~~~i~~fL~ 471 (476)
++.+.|.+||+
T Consensus 198 ~~~~~i~~fl~ 208 (208)
T 3trd_A 198 ELRELLVRNLA 208 (208)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 88888888874
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.82 E-value=5e-25 Score=212.24 Aligned_cols=285 Identities=16% Similarity=0.112 Sum_probs=157.2
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccccc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEF 146 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~ 146 (476)
..++. .+|.++.+.... .+|+|||+||++++...| ..+++.|+ +||+|+++|+||||.|......
T Consensus 7 ~~~~~--~~g~~~~~~~~g-------~~p~vv~lHG~~~~~~~~-----~~~~~~l~-~g~~v~~~D~~G~G~s~~~~~~ 71 (304)
T 3b12_A 7 RRLVD--VGDVTINCVVGG-------SGPALLLLHGFPQNLHMW-----ARVAPLLA-NEYTVVCADLRGYGGSSKPVGA 71 (304)
Confidence 34454 388888776541 368899999999999999 58888888 7999999999999999664210
Q ss_pred CccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccC
Q 011833 147 GEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKND 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
. ....
T Consensus 72 ~---------------------------------------------------------------------------~~~~ 76 (304)
T 3b12_A 72 P---------------------------------------------------------------------------DHAN 76 (304)
Confidence 0 0012
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhh
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLL 306 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~ 306 (476)
+++++++ +|+.++++.+. . ++++++||||||.+++.++.++| .+|+++|+++++..............
T Consensus 77 ~~~~~~~-~~l~~~l~~l~----~--~~~~lvG~S~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~ 144 (304)
T 3b12_A 77 YSFRAMA-SDQRELMRTLG----F--ERFHLVGHARGGRTGHRMALDHP-----DSVLSLAVLDIIPTYVMFEEVDRFVA 144 (304)
Confidence 5556666 78888887762 2 38999999999999999999987 78999999998754332211000000
Q ss_pred cCcchhhhccCCcCChHHHHHhhccCCCCchHHHH-HHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC
Q 011833 307 PLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLS-WLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG 385 (476)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (476)
...........+. .+...+... ....++.. ++..........+++.++.+..... .+ .....+...+...
T Consensus 145 ~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~- 215 (304)
T 3b12_A 145 RAYWHWYFLQQPA----PYPEKVIGA-DPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWR--DP-AAIHGSCCDYRAG- 215 (304)
Confidence 0000000000000 000000000 00001111 1111111111112222221111000 00 0000000000000
Q ss_pred ccccCCcccccccCCCCcccEEEEeeCCCCcC-CHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhH
Q 011833 386 LCDRSGTFFYKDHIGKTNVPVLALAADQDLIC-PTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 386 ~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~v-p~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
...+-.......+.++++|+|+|+|++|.++ |.+..+.+.+.+++. ++++ . ++||+.+ .+.++++.+
T Consensus 216 -~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~-----i-~~gH~~~---~e~p~~~~~ 283 (304)
T 3b12_A 216 -GTIDFELDHGDLGRQVQCPALVFSGSAGLMHSLFEMQVVWAPRLANM--RFAS-----L-PGGHFFV---DRFPDDTAR 283 (304)
Confidence 0000000011127789999999999999554 566667677766653 5554 3 8899544 678899999
Q ss_pred HHHHHHHhhc
Q 011833 465 CIIEFLTRHD 474 (476)
Q Consensus 465 ~i~~fL~~~~ 474 (476)
.|.+||+++.
T Consensus 284 ~i~~fl~~~~ 293 (304)
T 3b12_A 284 ILREFLSDAR 293 (304)
Confidence 9999998763
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.2e-22 Score=198.54 Aligned_cols=260 Identities=19% Similarity=0.254 Sum_probs=164.7
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccC
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
..+. +.||..+.++.+.|.. .++.|+||++||++++...|. .+. .++++||.|+++|+||+|.|.......
T Consensus 85 ~~~~-~~~g~~l~~~~~~P~~--~~~~p~vv~~HG~g~~~~~~~-----~~~-~~~~~G~~v~~~D~rG~g~s~~~~~~~ 155 (346)
T 3fcy_A 85 LYFT-GVRGARIHAKYIKPKT--EGKHPALIRFHGYSSNSGDWN-----DKL-NYVAAGFTVVAMDVRGQGGQSQDVGGV 155 (346)
T ss_dssp EEEE-CGGGCEEEEEEEEESC--SSCEEEEEEECCTTCCSCCSG-----GGH-HHHTTTCEEEEECCTTSSSSCCCCCCC
T ss_pred EEEE-cCCCCEEEEEEEecCC--CCCcCEEEEECCCCCCCCChh-----hhh-HHHhCCcEEEEEcCCCCCCCCCCCccc
Confidence 3444 5689999999998865 245789999999999998883 444 566889999999999999986543200
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
.|. ...+....|.+. + ..++
T Consensus 156 ------------~~~----------------------~~~~~~~~g~~~-~-------------------------~~~~ 175 (346)
T 3fcy_A 156 ------------TGN----------------------TLNGHIIRGLDD-D-------------------------ADNM 175 (346)
T ss_dssp ------------SSC----------------------CSBCSSSTTTTS-C-------------------------GGGC
T ss_pred ------------CCC----------------------CcCcceeccccC-C-------------------------HHHH
Confidence 000 000000000000 0 0123
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLP 307 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~ 307 (476)
.+.+.. +|+.++++++......+.++++++|||+||.+++.++..+| . |+++|+++|...... ..+
T Consensus 176 ~~~~~~-~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-----~-v~~~vl~~p~~~~~~-----~~~-- 241 (346)
T 3fcy_A 176 LFRHIF-LDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEP-----R-VRKVVSEYPFLSDYK-----RVW-- 241 (346)
T ss_dssp HHHHHH-HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHST-----T-CCEEEEESCSSCCHH-----HHH--
T ss_pred HHHHHH-HHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCc-----c-ccEEEECCCcccCHH-----HHh--
Confidence 344444 79999999998875544468999999999999999999976 3 999999987543110 000
Q ss_pred CcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCcc
Q 011833 308 LSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLC 387 (476)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (476)
...... .....+..++...... .....+.+..+
T Consensus 242 -------------------~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------------------------- 274 (346)
T 3fcy_A 242 -------------------DLDLAK-NAYQEITDYFRLFDPR-HERENEVFTKL-------------------------- 274 (346)
T ss_dssp -------------------HTTCCC-GGGHHHHHHHHHHCTT-CTTHHHHHHHH--------------------------
T ss_pred -------------------hccccc-cchHHHHHHHHhcCCC-cchHHHHHHHh--------------------------
Confidence 000000 0000011111110000 00001111100
Q ss_pred ccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHH
Q 011833 388 DRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCII 467 (476)
Q Consensus 388 ~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~ 467 (476)
...+....+.++++|+|+++|++|.++|++.++++++.++. .++++++ +++||..+ .++.+.++
T Consensus 275 ---~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~gH~~~-------~~~~~~i~ 338 (346)
T 3fcy_A 275 ---GYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQS-KKDIKVY-----PDYGHEPM-------RGFGDLAM 338 (346)
T ss_dssp ---GGGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCS-SEEEEEE-----TTCCSSCC-------TTHHHHHH
T ss_pred ---CcccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCC-CcEEEEe-----CCCCCcCH-------HHHHHHHH
Confidence 01122235678899999999999999999999999999986 4678887 89999543 67899999
Q ss_pred HHHHhh
Q 011833 468 EFLTRH 473 (476)
Q Consensus 468 ~fL~~~ 473 (476)
+||++.
T Consensus 339 ~fl~~l 344 (346)
T 3fcy_A 339 QFMLEL 344 (346)
T ss_dssp HHHHTT
T ss_pred HHHHHh
Confidence 999875
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-21 Score=185.49 Aligned_cols=257 Identities=14% Similarity=0.182 Sum_probs=156.8
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCC---CCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccc
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIG---TNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
..+. +.||..+.++.|.|... +.+|+||++||++ ++...|. ..+++.|++. |.|+++|+||+|.+...
T Consensus 6 ~~~~-~~dg~~l~~~~~~p~~~--~~~~~vv~~HG~~~~~~~~~~~~----~~~~~~l~~~-~~v~~~d~~~~~~~~~~- 76 (275)
T 3h04_A 6 YKVI-TKDAFALPYTIIKAKNQ--PTKGVIVYIHGGGLMFGKANDLS----PQYIDILTEH-YDLIQLSYRLLPEVSLD- 76 (275)
T ss_dssp EEEE-CTTSCEEEEEEECCSSS--SCSEEEEEECCSTTTSCCTTCSC----HHHHHHHTTT-EEEEEECCCCTTTSCHH-
T ss_pred EEEe-cCCcEEEEEEEEccCCC--CCCCEEEEEECCcccCCchhhhH----HHHHHHHHhC-ceEEeeccccCCccccc-
Confidence 3454 67999999999977642 4578999999988 5555552 3677778776 99999999999875321
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
T Consensus 77 -------------------------------------------------------------------------------- 76 (275)
T 3h04_A 77 -------------------------------------------------------------------------------- 76 (275)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHH
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRL 304 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~ 304 (476)
. ..+|+.++++++++..+. ++++++||||||.+++.++.+ .+|+++|++++..+..... ...
T Consensus 77 ------~-~~~d~~~~~~~l~~~~~~--~~i~l~G~S~Gg~~a~~~a~~-------~~v~~~v~~~~~~~~~~~~--~~~ 138 (275)
T 3h04_A 77 ------C-IIEDVYASFDAIQSQYSN--CPIFTFGRSSGAYLSLLIARD-------RDIDGVIDFYGYSRINTEP--FKT 138 (275)
T ss_dssp ------H-HHHHHHHHHHHHHHTTTT--SCEEEEEETHHHHHHHHHHHH-------SCCSEEEEESCCSCSCSHH--HHS
T ss_pred ------h-hHHHHHHHHHHHHhhCCC--CCEEEEEecHHHHHHHHHhcc-------CCccEEEeccccccccccc--ccc
Confidence 1 137888899999887544 499999999999999999987 4699999999987653321 000
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCC---HHHHHHHhhhccCCCCHHHHHHHHHHH
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMH---PELFEKLIFSNFGNIPTKLISQLTTVF 381 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (476)
.. .+.......+. . .............. ......+.. ......|...+
T Consensus 139 ~~-----------------~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 189 (275)
T 3h04_A 139 TN-----------------SYYAKIAQSIN--E---TMIAQLTSPTPVVQDQIAQRFLIYVY-------ARGTGKWINMI 189 (275)
T ss_dssp CC-----------------HHHHHHHTTSC--H---HHHHTTSCSSCCSSCSSGGGHHHHHH-------HHHHTCHHHHH
T ss_pred cc-----------------chhhcccccch--H---HHHhcccCCCCcCCCccccchhhhhh-------hhhcCchHHhh
Confidence 00 00000000000 0 00000000000000 000000000 00000011111
Q ss_pred HhCCccccCCccc-ccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCc-
Q 011833 382 QEGGLCDRSGTFF-YKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAA- 459 (476)
Q Consensus 382 ~~~~~~~~~g~~~-~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~- 459 (476)
...... ..... ....+.+++ |+|+++|++|.++|++.++++.+.+++. +++++ +++||... .+.+
T Consensus 190 ~~~~~~--~~~~~~~~~~~~~~~-P~lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~H~~~---~~~~~ 256 (275)
T 3h04_A 190 NIADYT--DSKYNIAPDELKTLP-PVFIAHCNGDYDVPVEESEHIMNHVPHS--TFERV-----NKNEHDFD---RRPND 256 (275)
T ss_dssp CCSCTT--SGGGSCCHHHHTTCC-CEEEEEETTCSSSCTHHHHHHHTTCSSE--EEEEE-----CSSCSCTT---SSCCH
T ss_pred cccccc--ccccccccchhccCC-CEEEEecCCCCCCChHHHHHHHHhcCCc--eEEEe-----CCCCCCcc---cCCch
Confidence 100000 00000 112346777 9999999999999999999999999875 57776 89999533 4555
Q ss_pred --cchhHHHHHHHHhh
Q 011833 460 --YQVYPCIIEFLTRH 473 (476)
Q Consensus 460 --~~v~~~i~~fL~~~ 473 (476)
+++++.+++||+++
T Consensus 257 ~~~~~~~~i~~fl~~~ 272 (275)
T 3h04_A 257 EAITIYRKVVDFLNAI 272 (275)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 68999999999876
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.89 E-value=3e-22 Score=201.18 Aligned_cols=302 Identities=12% Similarity=0.050 Sum_probs=160.7
Q ss_pred CceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcce---------eecCCCCCHHH---HHHhCCCcEEEecCCC-CCCcc
Q 011833 75 SDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIG---------YDLSPEYSFAR---YMSGQGFDTWILEVRG-AGLSA 141 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~---------~~~~~~~~l~~---~L~~~Gy~V~~~D~rG-~G~S~ 141 (476)
+|.++.+..+.+.. ...+|+|||+||++++... | ..++. .|+++||+|+++|+|| +|.|.
T Consensus 42 ~g~~l~y~~~g~~~--~~~~~~vvllHG~~~~~~~~~~~~~~~~~-----~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~ 114 (377)
T 2b61_A 42 SYINVAYQTYGTLN--DEKNNAVLICHALTGDAEPYFDDGRDGWW-----QNFMGAGLALDTDRYFFISSNVLGGCKGTT 114 (377)
T ss_dssp CSEEEEEEEESCCC--TTCCCEEEEECCTTCCSCSCCSSSCCCTT-----GGGEETTSSEETTTCEEEEECCTTCSSSSS
T ss_pred cceeEEEEeccccc--ccCCCeEEEeCCCCCccccccccccchhh-----hhccCcccccccCCceEEEecCCCCCCCCC
Confidence 67778777764332 1236899999999999987 7 45553 4767899999999999 78886
Q ss_pred cccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhc
Q 011833 142 HRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDL 221 (476)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (476)
.+...++ ..| ..|+ .+
T Consensus 115 ~~~~~~~----------~~g--~~~~---------------------------------------------~~------- 130 (377)
T 2b61_A 115 GPSSINP----------QTG--KPYG---------------------------------------------SQ------- 130 (377)
T ss_dssp CTTSBCT----------TTS--SBCG---------------------------------------------GG-------
T ss_pred CCcccCc----------ccc--cccc---------------------------------------------cc-------
Confidence 5321000 000 0000 00
Q ss_pred ccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEe-EEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh
Q 011833 222 IVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLL-AVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS 300 (476)
Q Consensus 222 ~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~-lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~ 300 (476)
...|++++++ +|+.++++.+ +. ++++ +|||||||.+++.+|.++| .+|+++|++++.........
T Consensus 131 --~~~~~~~~~~-~~l~~~l~~l----~~--~~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~ 196 (377)
T 2b61_A 131 --FPNIVVQDIV-KVQKALLEHL----GI--SHLKAIIGGSFGGMQANQWAIDYP-----DFMDNIVNLCSSIYFSAEAI 196 (377)
T ss_dssp --CCCCCHHHHH-HHHHHHHHHT----TC--CCEEEEEEETHHHHHHHHHHHHST-----TSEEEEEEESCCSSCCHHHH
T ss_pred --CCcccHHHHH-HHHHHHHHHc----CC--cceeEEEEEChhHHHHHHHHHHCc-----hhhheeEEeccCccccccch
Confidence 0024556655 6666666543 33 3787 9999999999999999988 78999999998654321111
Q ss_pred hH-HH----hhcC-cchhhhccCCcCChHHH-HHhhcc-C-CCCchHHHHHHHHhhcCCCC--CCHHHHHHHhh----hc
Q 011833 301 LL-RL----LLPL-SDPIQALNVPVIPLGTF-LAAIHP-F-ASSPPYVLSWLKFLISAPDM--MHPELFEKLIF----SN 365 (476)
Q Consensus 301 ~~-~~----~~~~-~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----~~ 365 (476)
.. .. +... ......+.....+...+ ...... . ......+..++......... ......+.+.. ..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (377)
T 2b61_A 197 GFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKF 276 (377)
T ss_dssp HHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhhhh
Confidence 00 00 0000 00000000000000000 000000 0 00000000100000000000 00011111111 00
Q ss_pred cCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCH----HHHHHHHHhcCCCceeEEEecC
Q 011833 366 FGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPT----EAVYETVKLIPEHLVSFKVFGE 441 (476)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~----~~~~~~~~~l~~~~~~~~v~~~ 441 (476)
........+......+....... ........+.++++|||+|+|++|.++|+ +.++.+.+.+++. +++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~~~--~~~~i-- 350 (377)
T 2b61_A 277 LERFDANSYLHLLRALDMYDPSL--GYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDL--HFYEF-- 350 (377)
T ss_dssp HTTCCHHHHHHHHHHHHHCCTTT--TSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEE--EEEEE--
T ss_pred ccccChhHHHHHHHHHhcccccc--ccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCCCc--eEEEe--
Confidence 01112222222222221111100 01112346788999999999999999999 8889999988864 77777
Q ss_pred CCCC-CCcccccccccCCccchhHHHHHHHHhh
Q 011833 442 PRGP-HYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 442 ~~~~-~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
+ ++||+.+ .+.++++++.|.+||+++
T Consensus 351 ---~~~~gH~~~---~e~p~~~~~~i~~fl~~~ 377 (377)
T 2b61_A 351 ---PSDYGHDAF---LVDYDQFEKRIRDGLAGN 377 (377)
T ss_dssp ---CCTTGGGHH---HHCHHHHHHHHHHHHHTC
T ss_pred ---CCCCCchhh---hcCHHHHHHHHHHHHhcC
Confidence 8 9999654 567899999999999864
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-22 Score=188.66 Aligned_cols=223 Identities=15% Similarity=0.134 Sum_probs=155.1
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.+|..+.++.+.|... .++.|+||++||++++...| ..+++.|+++||.|+++|+||+|.+.......
T Consensus 12 ~~~~~~~~~~~~~p~~~-~~~~p~vv~~HG~~g~~~~~-----~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~----- 80 (241)
T 3f67_A 12 PSQGENMPAYHARPKNA-DGPLPIVIVVQEIFGVHEHI-----RDLCRRLAQEGYLAIAPELYFRQGDPNEYHDI----- 80 (241)
T ss_dssp EETTEEEEEEEEEETTC-CSCEEEEEEECCTTCSCHHH-----HHHHHHHHHTTCEEEEECTTTTTCCGGGCCSH-----
T ss_pred ecCCcceEEEEecCCCC-CCCCCEEEEEcCcCccCHHH-----HHHHHHHHHCCcEEEEecccccCCCCCchhhH-----
Confidence 34899999999877643 24568999999999888777 58899999999999999999998764422100
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
......+ ....++++.
T Consensus 81 --------------------------------------------------------~~~~~~~--------~~~~~~~~~ 96 (241)
T 3f67_A 81 --------------------------------------------------------PTLFKEL--------VSKVPDAQV 96 (241)
T ss_dssp --------------------------------------------------------HHHHHHT--------GGGSCHHHH
T ss_pred --------------------------------------------------------HHHHHHh--------hhcCCchhh
Confidence 0000000 011233444
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchh
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPI 312 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~ 312 (476)
. +|+.++++++++.. .+.++++++||||||.+++.++.++| .+++++++.+.......
T Consensus 97 ~-~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~------~~~~~v~~~~~~~~~~~-------------- 154 (241)
T 3f67_A 97 L-ADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNP------QLKAAVAWYGKLVGEKS-------------- 154 (241)
T ss_dssp H-HHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCT------TCCEEEEESCCCSCCCC--------------
T ss_pred H-HHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCc------CcceEEEEeccccCCCc--------------
Confidence 4 89999999998764 33458999999999999999999865 37777775554211100
Q ss_pred hhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCc
Q 011833 313 QALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGT 392 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 392 (476)
. ....+
T Consensus 155 -------------------~-----------------~~~~~-------------------------------------- 160 (241)
T 3f67_A 155 -------------------L-----------------NSPKH-------------------------------------- 160 (241)
T ss_dssp -------------------S-----------------SSCCC--------------------------------------
T ss_pred -------------------c-----------------CCccC--------------------------------------
Confidence 0 00000
Q ss_pred ccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCC--CceeEEEecCCCCCCCcccccc-----cccCCccchhHH
Q 011833 393 FFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPE--HLVSFKVFGEPRGPHYAHYDLV-----GSRLAAYQVYPC 465 (476)
Q Consensus 393 ~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~--~~~~~~v~~~~~~~~~gH~~~~-----~~~~~~~~v~~~ 465 (476)
....+.++++|+|+++|++|.++|++.++.+.+.+.. ..++++++ ++++|.-.. ...+..+++++.
T Consensus 161 --~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~H~~~~~~~~~~~~~~~~~~~~~ 233 (241)
T 3f67_A 161 --PVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVY-----PEADHAFNADYRASYHEESAKDGWQR 233 (241)
T ss_dssp --HHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEE-----TTCCTTTTCTTSTTCCHHHHHHHHHH
T ss_pred --HHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEE-----CCCCcceecCCCCCCCHHHHHHHHHH
Confidence 0123556789999999999999999999999988842 34677777 899994321 112234678999
Q ss_pred HHHHHHhh
Q 011833 466 IIEFLTRH 473 (476)
Q Consensus 466 i~~fL~~~ 473 (476)
+++||++|
T Consensus 234 ~~~fl~~~ 241 (241)
T 3f67_A 234 MLAWFAQY 241 (241)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhhC
Confidence 99999875
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-22 Score=187.47 Aligned_cols=220 Identities=13% Similarity=0.109 Sum_probs=155.7
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccC
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
..+. +.||..+.++.+.|.. +++|+||++||++++...| ..+++.|+++||.|+++|+||+|.|......
T Consensus 6 ~~~~-~~~g~~l~~~~~~p~~---~~~p~vv~~hG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~- 75 (236)
T 1zi8_A 6 ISIQ-SYDGHTFGALVGSPAK---APAPVIVIAQDIFGVNAFM-----RETVSWLVDQGYAAVCPDLYARQAPGTALDP- 75 (236)
T ss_dssp CCEE-CTTSCEECEEEECCSS---CSEEEEEEECCTTBSCHHH-----HHHHHHHHHTTCEEEEECGGGGTSTTCBCCT-
T ss_pred EEEe-cCCCCeEEEEEECCCC---CCCCEEEEEcCCCCCCHHH-----HHHHHHHHhCCcEEEeccccccCCCcccccc-
Confidence 3454 5799999999987753 3568899999999988888 5889999999999999999999988542210
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
. .|.- .. .....+ ..+
T Consensus 76 -------------------~------------------------------~~~~--~~----~~~~~~---------~~~ 91 (236)
T 1zi8_A 76 -------------------Q------------------------------DERQ--RE----QAYKLW---------QAF 91 (236)
T ss_dssp -------------------T------------------------------CHHH--HH----HHHHHH---------HHC
T ss_pred -------------------c------------------------------chhh--hh----hhhhhh---------hcc
Confidence 0 0000 00 000000 013
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLP 307 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~ 307 (476)
+++++. +|+.++++++.++.... ++++++||||||.+++.++..+| |++++++.+....
T Consensus 92 ~~~~~~-~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~-------~~~~v~~~~~~~~------------ 150 (236)
T 1zi8_A 92 DMEAGV-GDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY-------VDRAVGYYGVGLE------------ 150 (236)
T ss_dssp CHHHHH-HHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC-------SSEEEEESCSSGG------------
T ss_pred Ccchhh-HHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC-------ccEEEEecCcccc------------
Confidence 344444 89999999997765422 58999999999999999998864 7788876653200
Q ss_pred CcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCcc
Q 011833 308 LSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLC 387 (476)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (476)
T Consensus 151 -------------------------------------------------------------------------------- 150 (236)
T 1zi8_A 151 -------------------------------------------------------------------------------- 150 (236)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCC-CceeEEEecCCCCCCCccccccccc-----CCccc
Q 011833 388 DRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPE-HLVSFKVFGEPRGPHYAHYDLVGSR-----LAAYQ 461 (476)
Q Consensus 388 ~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~-~~~~~~v~~~~~~~~~gH~~~~~~~-----~~~~~ 461 (476)
.....+.++++|+|+++|++|.++|++.++.+.+.+.. ..++++++ ++++|.-..... +..++
T Consensus 151 ------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~H~~~~~~~~~~~~~~~~~ 219 (236)
T 1zi8_A 151 ------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWY-----EEAGHSFARTGSSGYVASAAAL 219 (236)
T ss_dssp ------GCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEE-----TTCCTTTTCTTSTTCCHHHHHH
T ss_pred ------cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEE-----CCCCcccccCCCCccCHHHHHH
Confidence 00124556789999999999999999999999999854 25678877 889994322111 11246
Q ss_pred hhHHHHHHHHhh
Q 011833 462 VYPCIIEFLTRH 473 (476)
Q Consensus 462 v~~~i~~fL~~~ 473 (476)
+++.|++||+++
T Consensus 220 ~~~~i~~fl~~~ 231 (236)
T 1zi8_A 220 ANERTLDFLVPL 231 (236)
T ss_dssp HHHHHHHHHGGG
T ss_pred HHHHHHHHHHHh
Confidence 889999999886
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-22 Score=185.70 Aligned_cols=198 Identities=17% Similarity=0.213 Sum_probs=149.0
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCC--HHHHHHhCCCcEEEecCCCCCCccccc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYS--FARYMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~--l~~~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
..++.. +|.++.++.+.|... +.+|+||++||++++...| .. +++.|+++||.|+++|+||+|.|....
T Consensus 9 ~~~~~~--~g~~l~~~~~~p~~~--~~~~~vv~~hG~~~~~~~~-----~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~ 79 (210)
T 1imj_A 9 EGTIQV--QGQALFFREALPGSG--QARFSVLLLHGIRFSSETW-----QNLGTLHRLAQAGYRAVAIDLPGLGHSKEAA 79 (210)
T ss_dssp CCCEEE--TTEEECEEEEECSSS--CCSCEEEECCCTTCCHHHH-----HHHTHHHHHHHTTCEEEEECCTTSGGGTTSC
T ss_pred cceEee--CCeEEEEEEeCCCCC--CCCceEEEECCCCCcccee-----ecchhHHHHHHCCCeEEEecCCCCCCCCCCC
Confidence 345554 899999999977542 3578999999999999888 35 589999999999999999999986533
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
.
T Consensus 80 ~------------------------------------------------------------------------------- 80 (210)
T 1imj_A 80 A------------------------------------------------------------------------------- 80 (210)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred cCCCchhhh-hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHH
Q 011833 225 NDWDFDHYL-EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLR 303 (476)
Q Consensus 225 ~~~~~~~~~-~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~ 303 (476)
.++++++. .+|+.++++.+ +. ++++++|||+||.+++.++..+| .+|++++++++......
T Consensus 81 -~~~~~~~~~~~~~~~~~~~~----~~--~~~~l~G~S~Gg~~a~~~a~~~~-----~~v~~~v~~~~~~~~~~------ 142 (210)
T 1imj_A 81 -PAPIGELAPGSFLAAVVDAL----EL--GPPVVISPSLSGMYSLPFLTAPG-----SQLPGFVPVAPICTDKI------ 142 (210)
T ss_dssp -SSCTTSCCCTHHHHHHHHHH----TC--CSCEEEEEGGGHHHHHHHHTSTT-----CCCSEEEEESCSCGGGS------
T ss_pred -cchhhhcchHHHHHHHHHHh----CC--CCeEEEEECchHHHHHHHHHhCc-----cccceEEEeCCCccccc------
Confidence 01111111 14555555544 32 38999999999999999999877 78999999987642000
Q ss_pred HhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHh
Q 011833 304 LLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQE 383 (476)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (476)
.
T Consensus 143 --------------------------------------------------~----------------------------- 143 (210)
T 1imj_A 143 --------------------------------------------------N----------------------------- 143 (210)
T ss_dssp --------------------------------------------------C-----------------------------
T ss_pred --------------------------------------------------c-----------------------------
Confidence 0
Q ss_pred CCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchh
Q 011833 384 GGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVY 463 (476)
Q Consensus 384 ~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~ 463 (476)
...+.++++|+++++|++|. +|.+..+.+ +.+++ .++.++ +++||..+ .+.++.+.
T Consensus 144 ------------~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~~~--~~~~~~-----~~~~H~~~---~~~~~~~~ 199 (210)
T 1imj_A 144 ------------AANYASVKTPALIVYGDQDP-MGQTSFEHL-KQLPN--HRVLIM-----KGAGHPCY---LDKPEEWH 199 (210)
T ss_dssp ------------HHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TTSSS--EEEEEE-----TTCCTTHH---HHCHHHHH
T ss_pred ------------chhhhhCCCCEEEEEcCccc-CCHHHHHHH-hhCCC--CCEEEe-----cCCCcchh---hcCHHHHH
Confidence 01234578999999999999 999999999 88875 467777 89999543 45678899
Q ss_pred HHHHHHHHhh
Q 011833 464 PCIIEFLTRH 473 (476)
Q Consensus 464 ~~i~~fL~~~ 473 (476)
+.|.+||++.
T Consensus 200 ~~i~~fl~~~ 209 (210)
T 1imj_A 200 TGLLDFLQGL 209 (210)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhc
Confidence 9999999875
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.88 E-value=8.4e-22 Score=189.66 Aligned_cols=173 Identities=14% Similarity=0.198 Sum_probs=139.2
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccch
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQS 171 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 171 (476)
+++|+||++||++++...| ..+++.|+++||.|+++|+||+|.|....
T Consensus 52 ~~~p~vv~~HG~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~g~g~~~~~~--------------------------- 99 (262)
T 1jfr_A 52 GTFGAVVISPGFTAYQSSI-----AWLGPRLASQGFVVFTIDTNTTLDQPDSR--------------------------- 99 (262)
T ss_dssp CCEEEEEEECCTTCCGGGT-----TTHHHHHHTTTCEEEEECCSSTTCCHHHH---------------------------
T ss_pred CCCCEEEEeCCcCCCchhH-----HHHHHHHHhCCCEEEEeCCCCCCCCCchh---------------------------
Confidence 4568999999999999888 68999999999999999999999763210
Q ss_pred hhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHH----H
Q 011833 172 KSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRT----L 247 (476)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~----~ 247 (476)
.+|+.++++++.+ .
T Consensus 100 --------------------------------------------------------------~~d~~~~~~~l~~~~~~~ 117 (262)
T 1jfr_A 100 --------------------------------------------------------------GRQLLSALDYLTQRSSVR 117 (262)
T ss_dssp --------------------------------------------------------------HHHHHHHHHHHHHTSTTG
T ss_pred --------------------------------------------------------------HHHHHHHHHHHHhccccc
Confidence 2577778888876 2
Q ss_pred hCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHH
Q 011833 248 SKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLA 327 (476)
Q Consensus 248 ~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (476)
...+.++++++||||||.+++.++.++| . |+++|++++...
T Consensus 118 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-----~-v~~~v~~~p~~~--------------------------------- 158 (262)
T 1jfr_A 118 TRVDATRLGVMGHSMGGGGSLEAAKSRT-----S-LKAAIPLTGWNT--------------------------------- 158 (262)
T ss_dssp GGEEEEEEEEEEETHHHHHHHHHHHHCT-----T-CSEEEEESCCCS---------------------------------
T ss_pred cccCcccEEEEEEChhHHHHHHHHhcCc-----c-ceEEEeecccCc---------------------------------
Confidence 2223358999999999999999999876 3 899998776320
Q ss_pred hhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEE
Q 011833 328 AIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVL 407 (476)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvL 407 (476)
...+.++++|+|
T Consensus 159 --------------------------------------------------------------------~~~~~~~~~P~l 170 (262)
T 1jfr_A 159 --------------------------------------------------------------------DKTWPELRTPTL 170 (262)
T ss_dssp --------------------------------------------------------------------CCCCTTCCSCEE
T ss_pred --------------------------------------------------------------------cccccccCCCEE
Confidence 013556789999
Q ss_pred EEeeCCCCcCCHHH-HHHHHHhcCC-CceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 408 ALAADQDLICPTEA-VYETVKLIPE-HLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 408 ii~G~~D~~vp~~~-~~~~~~~l~~-~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
+++|++|.++|.+. ++++.+.+++ ..++++++ +++||..+ .+.++++.+.|.+||+++
T Consensus 171 ~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~H~~~---~~~~~~~~~~i~~fl~~~ 230 (262)
T 1jfr_A 171 VVGADGDTVAPVATHSKPFYESLPGSLDKAYLEL-----RGASHFTP---NTSDTTIAKYSISWLKRF 230 (262)
T ss_dssp EEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEE-----TTCCTTGG---GSCCHHHHHHHHHHHHHH
T ss_pred EEecCccccCCchhhHHHHHHHhhcCCCceEEEe-----CCCCcCCc---ccchHHHHHHHHHHHHHH
Confidence 99999999999998 9999999976 34677777 89999544 556789999999999875
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.88 E-value=6e-21 Score=177.47 Aligned_cols=200 Identities=17% Similarity=0.194 Sum_probs=149.7
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCC-----CcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGT-----NAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLS 140 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~-----~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S 140 (476)
+...+. +.|| .+.++.+.|...++.++|+||++||++. ....| ..+++.|+++||.|+++|+||+|.|
T Consensus 11 ~~~~~~-~~~g-~~~~~~~~p~~~~~~~~~~vv~~HG~~~~~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~g~s 83 (220)
T 2fuk_A 11 AALTLD-GPVG-PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVV-----TMAARALRELGITVVRFNFRSVGTS 83 (220)
T ss_dssp EEEEEE-ETTE-EEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHH-----HHHHHHHHTTTCEEEEECCTTSTTC
T ss_pred eEEEEe-CCCC-eEEEEEEeCCCCCccccCEEEEECCCCCcCCcccchHH-----HHHHHHHHHCCCeEEEEecCCCCCC
Confidence 455666 5778 8888888776532245799999999632 22223 4678899999999999999999998
Q ss_pred ccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhh
Q 011833 141 AHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLD 220 (476)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (476)
.....
T Consensus 84 ~~~~~--------------------------------------------------------------------------- 88 (220)
T 2fuk_A 84 AGSFD--------------------------------------------------------------------------- 88 (220)
T ss_dssp CSCCC---------------------------------------------------------------------------
T ss_pred CCCcc---------------------------------------------------------------------------
Confidence 54221
Q ss_pred cccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh
Q 011833 221 LIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS 300 (476)
Q Consensus 221 ~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~ 300 (476)
......+|+.++++++.+..+. ++++++||||||.+++.++.++ +|+++|++++......
T Consensus 89 --------~~~~~~~d~~~~~~~l~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~-------~v~~~v~~~~~~~~~~--- 148 (220)
T 2fuk_A 89 --------HGDGEQDDLRAVAEWVRAQRPT--DTLWLAGFSFGAYVSLRAAAAL-------EPQVLISIAPPAGRWD--- 148 (220)
T ss_dssp --------TTTHHHHHHHHHHHHHHHHCTT--SEEEEEEETHHHHHHHHHHHHH-------CCSEEEEESCCBTTBC---
T ss_pred --------cCchhHHHHHHHHHHHHhcCCC--CcEEEEEECHHHHHHHHHHhhc-------cccEEEEecccccchh---
Confidence 0011247999999999888543 4899999999999999999873 6999999988753110
Q ss_pred hHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHH
Q 011833 301 LLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTV 380 (476)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (476)
T Consensus 149 -------------------------------------------------------------------------------- 148 (220)
T 2fuk_A 149 -------------------------------------------------------------------------------- 148 (220)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCcc
Q 011833 381 FQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAY 460 (476)
Q Consensus 381 ~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~ 460 (476)
+ +.+. ..+|+|+++|++|.++|++.++++.+.+.. .++++++ ++++|... . .++
T Consensus 149 -----~----------~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~H~~~---~-~~~ 202 (220)
T 2fuk_A 149 -----F----------SDVQ-PPAQWLVIQGDADEIVDPQAVYDWLETLEQ-QPTLVRM-----PDTSHFFH---R-KLI 202 (220)
T ss_dssp -----C----------TTCC-CCSSEEEEEETTCSSSCHHHHHHHHTTCSS-CCEEEEE-----TTCCTTCT---T-CHH
T ss_pred -----h----------hhcc-cCCcEEEEECCCCcccCHHHHHHHHHHhCc-CCcEEEe-----CCCCceeh---h-hHH
Confidence 0 0111 257899999999999999999999999943 3577877 89999533 3 367
Q ss_pred chhHHHHHHHHhh
Q 011833 461 QVYPCIIEFLTRH 473 (476)
Q Consensus 461 ~v~~~i~~fL~~~ 473 (476)
++.+.+.+||++.
T Consensus 203 ~~~~~i~~~l~~~ 215 (220)
T 2fuk_A 203 DLRGALQHGVRRW 215 (220)
T ss_dssp HHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHH
Confidence 8999999999875
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=204.25 Aligned_cols=68 Identities=19% Similarity=0.239 Sum_probs=58.8
Q ss_pred cccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCC-CCcccccccccCCccchhHHHHHHHHhh
Q 011833 396 KDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGP-HYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 396 ~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~-~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
.+.+.++++|+|+|+|++|.++|++.++++.+.+++. +++++ + ++||+.+ .+.++++.+.|.+||+++
T Consensus 374 ~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~p~~--~~~~i-----~~~~GH~~~---~e~p~~~~~~i~~fL~~~ 442 (444)
T 2vat_A 374 PEALAMITQPALIICARSDGLYSFDEHVEMGRSIPNS--RLCVV-----DTNEGHDFF---VMEADKVNDAVRGFLDQS 442 (444)
T ss_dssp HHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHSTTE--EEEEC-----CCSCGGGHH---HHTHHHHHHHHHHHHTC-
T ss_pred HHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCc--EEEEe-----CCCCCcchH---HhCHHHHHHHHHHHHHHh
Confidence 3467889999999999999999999999999999864 77777 8 8999655 567899999999999865
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.2e-22 Score=199.33 Aligned_cols=134 Identities=18% Similarity=0.335 Sum_probs=99.7
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcc-----eeec-CC-----CCCHHHHHHhCCCcEEEecCCCCCCcc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAI-----GYDL-SP-----EYSFARYMSGQGFDTWILEVRGAGLSA 141 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~-----~~~~-~~-----~~~l~~~L~~~Gy~V~~~D~rG~G~S~ 141 (476)
..+|..+.+..+.. +.+|+||++||++++.. .|.. .+ ...+++.|+++||.|+++|+||+|.|.
T Consensus 34 ~~~~~~~~~~~~~~-----~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 108 (354)
T 2rau_A 34 PYDIISLHKVNLIG-----GGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPP 108 (354)
T ss_dssp TTCEEEEEEEEETT-----CCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCT
T ss_pred CCCceEEEeecccC-----CCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCC
Confidence 34666676655532 24689999999999886 4510 00 017899999999999999999999996
Q ss_pred cccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhc
Q 011833 142 HRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDL 221 (476)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (476)
...... ..
T Consensus 109 ~~~~~~----------------------------------------------------------------~~-------- 116 (354)
T 2rau_A 109 FLKDRQ----------------------------------------------------------------LS-------- 116 (354)
T ss_dssp TCCGGG----------------------------------------------------------------GG--------
T ss_pred cccccc----------------------------------------------------------------cc--------
Confidence 432100 00
Q ss_pred ccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC-CCCCCcccccEEEEeccc
Q 011833 222 IVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC-GFEGKDSGFASVTTLASS 292 (476)
Q Consensus 222 ~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~-p~~~~~~~v~~lvlla~~ 292 (476)
....+++++++ +|+.+++++++++.+.+ +++++||||||.+++.++.++ | .+|+++|++++.
T Consensus 117 -~~~~~~~~~~~-~d~~~~~~~l~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p-----~~v~~lvl~~~~ 179 (354)
T 2rau_A 117 -FTANWGWSTWI-SDIKEVVSFIKRDSGQE--RIYLAGESFGGIAALNYSSLYWK-----NDIKGLILLDGG 179 (354)
T ss_dssp -GGTTCSHHHHH-HHHHHHHHHHHHHHCCS--SEEEEEETHHHHHHHHHHHHHHH-----HHEEEEEEESCS
T ss_pred -cccCCcHHHHH-HHHHHHHHHHHHhcCCc--eEEEEEECHhHHHHHHHHHhcCc-----cccceEEEeccc
Confidence 00136777777 79999999998876554 899999999999999999987 7 789999999754
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-20 Score=187.47 Aligned_cols=134 Identities=18% Similarity=0.144 Sum_probs=102.7
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccC
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
..+. +.||..+.++.+.|.....++.|+||++||++++...|. ..++..|+++||.|+++|+||+|.|.....
T Consensus 71 ~~~~-~~~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~~~~----~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~-- 143 (367)
T 2hdw_A 71 VTFA-NRYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQSS----GLYAQTMAERGFVTLAFDPSYTGESGGQPR-- 143 (367)
T ss_dssp EEEE-CTTSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTTSHH----HHHHHHHHHTTCEEEEECCTTSTTSCCSSS--
T ss_pred EEEe-cCCCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcchhhH----HHHHHHHHHCCCEEEEECCCCcCCCCCcCc--
Confidence 3444 567999999988776522345688999999998887773 237889999999999999999999864321
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
.+
T Consensus 144 ------------------------------------------------------------------------------~~ 145 (367)
T 2hdw_A 144 ------------------------------------------------------------------------------NV 145 (367)
T ss_dssp ------------------------------------------------------------------------------SC
T ss_pred ------------------------------------------------------------------------------cc
Confidence 01
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
.......+|+.+++++++++...+.++++++|||+||.+++.++.++| +|+++|+++|.
T Consensus 146 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p------~~~~~v~~~p~ 204 (367)
T 2hdw_A 146 ASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK------RVKAVVTSTMY 204 (367)
T ss_dssp CCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT------TCCEEEEESCC
T ss_pred cchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC------CccEEEEeccc
Confidence 111123479999999998875444458999999999999999998864 59999999864
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=202.44 Aligned_cols=259 Identities=12% Similarity=0.126 Sum_probs=157.3
Q ss_pred CceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHH-HHHHhCCCcEEEecCCCCCCcccc
Q 011833 65 DELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFA-RYMSGQGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 65 ~e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~-~~L~~~Gy~V~~~D~rG~G~S~~~ 143 (476)
.+...+.. +|..|..+.+++. .++.|+||++||++++...|. .+. ..+.++||.|+++|+||+|.|...
T Consensus 135 ~~~~~i~~--~~~~l~~~~~~~~---~~~~p~vv~~HG~~~~~~~~~-----~~~~~~~~~~g~~vi~~D~~G~G~s~~~ 204 (405)
T 3fnb_A 135 LKSIEVPF--EGELLPGYAIISE---DKAQDTLIVVGGGDTSREDLF-----YMLGYSGWEHDYNVLMVDLPGQGKNPNQ 204 (405)
T ss_dssp CEEEEEEE--TTEEEEEEEECCS---SSCCCEEEEECCSSCCHHHHH-----HHTHHHHHHTTCEEEEECCTTSTTGGGG
T ss_pred cEEEEEeE--CCeEEEEEEEcCC---CCCCCEEEEECCCCCCHHHHH-----HHHHHHHHhCCcEEEEEcCCCCcCCCCC
Confidence 34455553 8899999888543 234589999999999888873 333 356689999999999999998532
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
..
T Consensus 205 ~~------------------------------------------------------------------------------ 206 (405)
T 3fnb_A 205 GL------------------------------------------------------------------------------ 206 (405)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 21
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHH
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLR 303 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~ 303 (476)
.++. ++ .+|+.++++++.... .+++++||||||.+++.++..+| +|+++|+++|..+.... ..
T Consensus 207 --~~~~-~~-~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p------~v~~~v~~~p~~~~~~~---~~ 269 (405)
T 3fnb_A 207 --HFEV-DA-RAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK------RIKAWIASTPIYDVAEV---FR 269 (405)
T ss_dssp --CCCS-CT-HHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT------TCCEEEEESCCSCHHHH---HH
T ss_pred --CCCc-cH-HHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc------CeEEEEEecCcCCHHHH---HH
Confidence 0111 11 378888999886643 48999999999999999998853 69999999987754321 11
Q ss_pred HhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHH---HHHHHhhhccCCCCH-HHHHHHHH
Q 011833 304 LLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPE---LFEKLIFSNFGNIPT-KLISQLTT 379 (476)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~ 379 (476)
...+ .....+......+... ....+.. .+..+.... ..... ..+..
T Consensus 270 ~~~~-----------------------~~~~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--- 319 (405)
T 3fnb_A 270 ISFS-----------------------TALKAPKTILKWGSKL---VTSVNKVAEVNLNKYAWQF-GQVDFITSVNE--- 319 (405)
T ss_dssp HHCC--------------------------------------------CCCHHHHHHHHHHHHHH-TSSSHHHHHHH---
T ss_pred Hhhh-----------------------hhhhCcHHHHHHHHHH---hhccchhHHHHHHHhhhhc-CCCCHHHHHHH---
Confidence 0000 0000000000000000 0000000 011111000 01110 11111
Q ss_pred HHHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCC--CceeEEEecCCCCCCCcccccccccC
Q 011833 380 VFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPE--HLVSFKVFGEPRGPHYAHYDLVGSRL 457 (476)
Q Consensus 380 ~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~--~~~~~~v~~~~~~~~~gH~~~~~~~~ 457 (476)
+... .....+.++++|+|+|+|++|.++|++.+.++++.+++ ..++++++. ..+|.|| ....+
T Consensus 320 ~~~~----------~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~~~~l~~~~--~~~h~gh---~~~~~ 384 (405)
T 3fnb_A 320 VLEQ----------AQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLRKFS--SESGADA---HCQVN 384 (405)
T ss_dssp HHHH----------CCCCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHHHTTCCEEEEEEC--TTTTCCS---GGGGG
T ss_pred HHHh----------hcccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhccCCCCceEEEEc--CCccchh---ccccc
Confidence 1100 00113678999999999999999999999999999974 345677761 2234555 44577
Q ss_pred CccchhHHHHHHHHhh
Q 011833 458 AAYQVYPCIIEFLTRH 473 (476)
Q Consensus 458 ~~~~v~~~i~~fL~~~ 473 (476)
.++.+++.|.+||+++
T Consensus 385 ~~~~~~~~i~~fL~~~ 400 (405)
T 3fnb_A 385 NFRLMHYQVFEWLNHI 400 (405)
T ss_dssp GHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 8899999999999875
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.87 E-value=7.9e-21 Score=185.36 Aligned_cols=256 Identities=16% Similarity=0.163 Sum_probs=159.3
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCC-cceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccccc
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTN-AIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEF 146 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~-~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~ 146 (476)
..+. +.||..+.++.+.|.. .++.|+||++||++++ ...|. ....|+++||.|+++|+||+|.|......
T Consensus 59 ~~~~-~~~g~~i~~~~~~P~~--~~~~p~vv~~HG~~~~~~~~~~------~~~~l~~~g~~v~~~d~rg~g~s~~~~~~ 129 (318)
T 1l7a_A 59 LTYK-SFGNARITGWYAVPDK--EGPHPAIVKYHGYNASYDGEIH------EMVNWALHGYATFGMLVRGQQRSEDTSIS 129 (318)
T ss_dssp EEEE-EGGGEEEEEEEEEESS--CSCEEEEEEECCTTCCSGGGHH------HHHHHHHTTCEEEEECCTTTSSSCCCCCC
T ss_pred EEEE-ccCCCEEEEEEEeeCC--CCCccEEEEEcCCCCCCCCCcc------cccchhhCCcEEEEecCCCCCCCCCcccc
Confidence 3444 4589999999998865 2456889999999998 77772 33477888999999999999998654210
Q ss_pred CccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccC
Q 011833 147 GEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKND 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
. | . ...+....+ +....+
T Consensus 130 ~-------------~--~--------------------~~~~~~~~~---------------------------~~~~~~ 147 (318)
T 1l7a_A 130 P-------------H--G--------------------HALGWMTKG---------------------------ILDKDT 147 (318)
T ss_dssp S-------------S--C--------------------CSSSSTTTT---------------------------TTCTTT
T ss_pred c-------------C--C--------------------ccccceecc---------------------------CCCHHH
Confidence 0 0 0 000000000 000012
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhh
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLL 306 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~ 306 (476)
|.+.... +|+.++++++.++.+.+.++++++|||+||.+++.++..+| +++++|+++|...... . .
T Consensus 148 ~~~~~~~-~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~------~~~~~v~~~p~~~~~~-----~-~- 213 (318)
T 1l7a_A 148 YYYRGVY-LDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSD------IPKAAVADYPYLSNFE-----R-A- 213 (318)
T ss_dssp CHHHHHH-HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCS------CCSEEEEESCCSCCHH-----H-H-
T ss_pred HHHHHHH-HHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCC------CccEEEecCCcccCHH-----H-H-
Confidence 3344444 89999999998875544468999999999999999998865 4888888776532110 0 0
Q ss_pred cCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCc
Q 011833 307 PLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGL 386 (476)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (476)
.. ....... ..+..++... . .+... ..+.....
T Consensus 214 -------------------~~-~~~~~~~-~~~~~~~~~~-~-----~~~~~----------------~~~~~~~~---- 246 (318)
T 1l7a_A 214 -------------------ID-VALEQPY-LEINSFFRRN-G-----SPETE----------------VQAMKTLS---- 246 (318)
T ss_dssp -------------------HH-HCCSTTT-THHHHHHHHS-C-----CHHHH----------------HHHHHHHH----
T ss_pred -------------------Hh-cCCcCcc-HHHHHHHhcc-C-----CcccH----------------HHHHHhhc----
Confidence 00 0000000 0000000000 0 00000 00000000
Q ss_pred cccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHH
Q 011833 387 CDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCI 466 (476)
Q Consensus 387 ~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i 466 (476)
.++....+.++++|+|+++|++|.++|++.+.++++.++.. ++++++ +++||. ...++.+.+
T Consensus 247 -----~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~-~~~~~~-----~~~~H~-------~~~~~~~~~ 308 (318)
T 1l7a_A 247 -----YFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETK-KELKVY-----RYFGHE-------YIPAFQTEK 308 (318)
T ss_dssp -----TTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCSS-EEEEEE-----TTCCSS-------CCHHHHHHH
T ss_pred -----cccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCCC-eeEEEc-----cCCCCC-------CcchhHHHH
Confidence 01112346678899999999999999999999999999864 677877 899995 135678999
Q ss_pred HHHHHhh
Q 011833 467 IEFLTRH 473 (476)
Q Consensus 467 ~~fL~~~ 473 (476)
.+||+++
T Consensus 309 ~~fl~~~ 315 (318)
T 1l7a_A 309 LAFFKQI 315 (318)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4.7e-21 Score=186.27 Aligned_cols=225 Identities=13% Similarity=0.093 Sum_probs=139.0
Q ss_pred eEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCc
Q 011833 69 YVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGE 148 (476)
Q Consensus 69 ~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~ 148 (476)
.+.+..||.+|.++.|.|... ++.|.||++||++.+..... ...+++.|+++||.|+++|+||||.|.......
T Consensus 33 ~~~~~~dG~~i~g~l~~P~~~--~~~p~Vl~~HG~g~~~~~~~---~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~- 106 (259)
T 4ao6_A 33 GFSLEVDGRTVPGVYWSPAEG--SSDRLVLLGHGGTTHKKVEY---IEQVAKLLVGRGISAMAIDGPGHGERASVQAGR- 106 (259)
T ss_dssp EEEEEETTEEEEEEEEEESSS--CCSEEEEEEC--------CH---HHHHHHHHHHTTEEEEEECCCC------------
T ss_pred EEEEeeCCeEEEEEEEeCCCC--CCCCEEEEeCCCcccccchH---HHHHHHHHHHCCCeEEeeccCCCCCCCCccccc-
Confidence 344456999999999988654 34678999999988753321 046789999999999999999999986533200
Q ss_pred cccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCC
Q 011833 149 DSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWD 228 (476)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (476)
.....+.. . .....+. ....
T Consensus 107 ------------~~~~~~~~-------------------------------~---------~~~~~~~--------~~~~ 126 (259)
T 4ao6_A 107 ------------EPTDVVGL-------------------------------D---------AFPRMWH--------EGGG 126 (259)
T ss_dssp --------------CCGGGS-------------------------------T---------THHHHHH--------HTTH
T ss_pred ------------ccchhhhh-------------------------------h---------hhhhhhh--------hhhh
Confidence 00000000 0 0000000 0001
Q ss_pred chhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcC
Q 011833 229 FDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPL 308 (476)
Q Consensus 229 ~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~ 308 (476)
... ...|..+++++++..... +++.++|+||||.+++.+++.. .+|++.|+..+......
T Consensus 127 ~~~-~~~d~~a~l~~l~~~~d~--~rv~~~G~S~GG~~a~~~a~~~------pri~Aav~~~~~~~~~~----------- 186 (259)
T 4ao6_A 127 TAA-VIADWAAALDFIEAEEGP--RPTGWWGLSMGTMMGLPVTASD------KRIKVALLGLMGVEGVN----------- 186 (259)
T ss_dssp HHH-HHHHHHHHHHHHHHHHCC--CCEEEEECTHHHHHHHHHHHHC------TTEEEEEEESCCTTSTT-----------
T ss_pred HHH-HHHHHHHHHHHhhhccCC--ceEEEEeechhHHHHHHHHhcC------CceEEEEEecccccccc-----------
Confidence 111 235788888988777654 4999999999999999999885 46777665332211000
Q ss_pred cchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccc
Q 011833 309 SDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCD 388 (476)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (476)
..
T Consensus 187 ----------------------------------------------~~-------------------------------- 188 (259)
T 4ao6_A 187 ----------------------------------------------GE-------------------------------- 188 (259)
T ss_dssp ----------------------------------------------HH--------------------------------
T ss_pred ----------------------------------------------cc--------------------------------
Confidence 00
Q ss_pred cCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHH
Q 011833 389 RSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIE 468 (476)
Q Consensus 389 ~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~ 468 (476)
...+.+.+|++|+|+++|++|.++|++.+.++++.+...++.++++ | .+|.+. ...++++.+++
T Consensus 189 -----~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~-----~-G~H~~~-----p~~e~~~~~~~ 252 (259)
T 4ao6_A 189 -----DLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVN-----P-GKHSAV-----PTWEMFAGTVD 252 (259)
T ss_dssp -----HHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEE-----S-SCTTCC-----CHHHHTHHHHH
T ss_pred -----chhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEe-----C-CCCCCc-----CHHHHHHHHHH
Confidence 0012356789999999999999999999999999998877888886 3 477432 12568899999
Q ss_pred HHHhh
Q 011833 469 FLTRH 473 (476)
Q Consensus 469 fL~~~ 473 (476)
||++|
T Consensus 253 fl~~h 257 (259)
T 4ao6_A 253 YLDQR 257 (259)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99987
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-21 Score=184.69 Aligned_cols=233 Identities=16% Similarity=0.184 Sum_probs=143.2
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccch
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQS 171 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 171 (476)
..+++|||+||++++...| ..++..|++. |+|+++|+||+|.|.....
T Consensus 18 ~~~~~vv~~HG~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~-------------------------- 65 (267)
T 3fla_A 18 DARARLVCLPHAGGSASFF-----FPLAKALAPA-VEVLAVQYPGRQDRRHEPP-------------------------- 65 (267)
T ss_dssp TCSEEEEEECCTTCCGGGG-----HHHHHHHTTT-EEEEEECCTTSGGGTTSCC--------------------------
T ss_pred CCCceEEEeCCCCCCchhH-----HHHHHHhccC-cEEEEecCCCCCCCCCCCC--------------------------
Confidence 4579999999999999999 5788888765 9999999999999865321
Q ss_pred hhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCC
Q 011833 172 KSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPK 251 (476)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~ 251 (476)
.+++++++ +|+.++++.+ +
T Consensus 66 ------------------------------------------------------~~~~~~~~-~~~~~~l~~~----~-- 84 (267)
T 3fla_A 66 ------------------------------------------------------VDSIGGLT-NRLLEVLRPF----G-- 84 (267)
T ss_dssp ------------------------------------------------------CCSHHHHH-HHHHHHTGGG----T--
T ss_pred ------------------------------------------------------CcCHHHHH-HHHHHHHHhc----C--
Confidence 23445555 5665555543 2
Q ss_pred CCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhcc
Q 011833 252 DGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHP 331 (476)
Q Consensus 252 ~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (476)
.++++++||||||.+++.++.++|-.. ...+++++++++......... .........+...+..
T Consensus 85 ~~~~~lvG~S~Gg~ia~~~a~~~~~~~-~~~v~~lvl~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~ 148 (267)
T 3fla_A 85 DRPLALFGHSMGAIIGYELALRMPEAG-LPAPVHLFASGRRAPSRYRDD---------------DVRGASDERLVAELRK 148 (267)
T ss_dssp TSCEEEEEETHHHHHHHHHHHHTTTTT-CCCCSEEEEESCCCTTCCCCS---------------CTTCCCHHHHHHHHHH
T ss_pred CCceEEEEeChhHHHHHHHHHhhhhhc-cccccEEEECCCCccccccch---------------hhcccchHHHHHHHHH
Confidence 348999999999999999999987100 023899999987643222100 0000111111111111
Q ss_pred CCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEee
Q 011833 332 FASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAA 411 (476)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G 411 (476)
+.... ..... +++..+.+. ..+........ .+... ...++++|+|+++|
T Consensus 149 ~~~~~-------~~~~~-----~~~~~~~~~---------~~~~~~~~~~~---------~~~~~-~~~~~~~P~l~i~g 197 (267)
T 3fla_A 149 LGGSD-------AAMLA-----DPELLAMVL---------PAIRSDYRAVE---------TYRHE-PGRRVDCPVTVFTG 197 (267)
T ss_dssp TCHHH-------HHHHH-----SHHHHHHHH---------HHHHHHHHHHH---------HCCCC-TTCCBSSCEEEEEE
T ss_pred hcCcc-------hhhcc-----CHHHHHHHH---------HHHHHHHHhhh---------ccccc-ccCcCCCCEEEEec
Confidence 10000 00000 011111110 00000000000 01111 12678999999999
Q ss_pred CCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 412 DQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 412 ~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
++|.++|++.++.+.+.+++ .++++++ ++ ||+.+ .+.++++.+.|.+||++..
T Consensus 198 ~~D~~~~~~~~~~~~~~~~~-~~~~~~~-----~g-gH~~~---~~~~~~~~~~i~~fl~~~~ 250 (267)
T 3fla_A 198 DHDPRVSVGEARAWEEHTTG-PADLRVL-----PG-GHFFL---VDQAAPMIATMTEKLAGPA 250 (267)
T ss_dssp TTCTTCCHHHHHGGGGGBSS-CEEEEEE-----SS-STTHH---HHTHHHHHHHHHHHTC---
T ss_pred CCCCCCCHHHHHHHHHhcCC-CceEEEe-----cC-Cceee---ccCHHHHHHHHHHHhcccc
Confidence 99999999999999999987 3578877 77 99654 5678999999999998753
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-22 Score=194.11 Aligned_cols=258 Identities=12% Similarity=0.112 Sum_probs=150.2
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCC--CCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGI--GTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~--~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~ 143 (476)
+..++.+ ++..+.++. .+ .+|+|||+||+ +++...| ..++..|+ +||+|+++|+||||.|+..
T Consensus 22 ~~~~v~~--~~~~~~~~~-~~------~~p~vv~lHG~G~~~~~~~~-----~~~~~~L~-~~~~vi~~D~~G~G~S~~~ 86 (292)
T 3l80_A 22 NKEMVNT--LLGPIYTCH-RE------GNPCFVFLSGAGFFSTADNF-----ANIIDKLP-DSIGILTIDAPNSGYSPVS 86 (292)
T ss_dssp EEEEECC--TTSCEEEEE-EC------CSSEEEEECCSSSCCHHHHT-----HHHHTTSC-TTSEEEEECCTTSTTSCCC
T ss_pred CcceEEe--cCceEEEec-CC------CCCEEEEEcCCCCCcHHHHH-----HHHHHHHh-hcCeEEEEcCCCCCCCCCC
Confidence 3455653 444566552 11 35899999965 5556677 46777776 6999999999999999732
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
..
T Consensus 87 ~~------------------------------------------------------------------------------ 88 (292)
T 3l80_A 87 NQ------------------------------------------------------------------------------ 88 (292)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 21
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHH
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLR 303 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~ 303 (476)
..+++++++ +|+.++++.+ +. ++++++||||||.+++.++.++| .+|+++|++++......
T Consensus 89 -~~~~~~~~~-~~l~~~l~~~----~~--~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~------ 149 (292)
T 3l80_A 89 -ANVGLRDWV-NAILMIFEHF----KF--QSYLLCVHSIGGFAALQIMNQSS-----KACLGFIGLEPTTVMIY------ 149 (292)
T ss_dssp -TTCCHHHHH-HHHHHHHHHS----CC--SEEEEEEETTHHHHHHHHHHHCS-----SEEEEEEEESCCCHHHH------
T ss_pred -ccccHHHHH-HHHHHHHHHh----CC--CCeEEEEEchhHHHHHHHHHhCc-----hheeeEEEECCCCcchh------
Confidence 135666666 6776666654 33 38999999999999999999988 88999999996532110
Q ss_pred HhhcCcchhhhccCCcCChHHHHHhhccCCCCch----HHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHH
Q 011833 304 LLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPP----YVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTT 379 (476)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (476)
+...... ....... ......... ++...+... ..++..... .........
T Consensus 150 -~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~---------~~~~~~~~~ 203 (292)
T 3l80_A 150 -RAGFSSD---------LYPQLAL-RRQKLKTAADRLNYLKDLSRSH------FSSQQFKQL---------WRGYDYCQR 203 (292)
T ss_dssp -HHCTTSS---------SSHHHHH-HHHTCCSHHHHHHHHHHHHHHH------SCHHHHHHH---------HHHHHHHHH
T ss_pred -hhccccc---------cchhHHH-HHHHHhccCchhhhHhhccccc------cCHHHHHHh---------HHHHHHHHH
Confidence 0000000 0000000 000000000 000000000 001110000 001111111
Q ss_pred HHHhCC----ccccC--CcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccc
Q 011833 380 VFQEGG----LCDRS--GTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLV 453 (476)
Q Consensus 380 ~~~~~~----~~~~~--g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~ 453 (476)
.+.... +..+. ...++.+.+.+ ++|+|+|+|++|.+++++ . .+.+.+++. + .++ +++||+.+
T Consensus 204 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~~~-~-~~~~~~~~~--~-~~~-----~~~gH~~~- 271 (292)
T 3l80_A 204 QLNDVQSLPDFKIRLALGEEDFKTGISE-KIPSIVFSESFREKEYLE-S-EYLNKHTQT--K-LIL-----CGQHHYLH- 271 (292)
T ss_dssp HHHTTTTSTTCCSSCCCCGGGGCCCCCT-TSCEEEEECGGGHHHHHT-S-TTCCCCTTC--E-EEE-----CCSSSCHH-
T ss_pred HHHhhhhccccchhhhhcchhhhhccCC-CCCEEEEEccCccccchH-H-HHhccCCCc--e-eee-----CCCCCcch-
Confidence 121111 11111 11122246667 999999999999999998 6 888888876 3 555 89999554
Q ss_pred cccCCccchhHHHHHHHHhhcC
Q 011833 454 GSRLAAYQVYPCIIEFLTRHDM 475 (476)
Q Consensus 454 ~~~~~~~~v~~~i~~fL~~~~~ 475 (476)
.+.++++.+.|.+||+++..
T Consensus 272 --~e~p~~~~~~i~~fl~~~~~ 291 (292)
T 3l80_A 272 --WSETNSILEKVEQLLSNHEK 291 (292)
T ss_dssp --HHCHHHHHHHHHHHHHTCTT
T ss_pred --hhCHHHHHHHHHHHHHhccc
Confidence 57789999999999998753
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.86 E-value=4.3e-21 Score=178.66 Aligned_cols=219 Identities=15% Similarity=0.112 Sum_probs=145.5
Q ss_pred CceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccc
Q 011833 75 SDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITS 154 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~ 154 (476)
+|..+.+ |.|.+ .+|+||++||++++...| ..++..|+++||.|+++|+||+|.|.......
T Consensus 11 ~g~~~~~--~~~~~----~~~~vv~~hG~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~------- 72 (238)
T 1ufo_A 11 AGLSVLA--RIPEA----PKALLLALHGLQGSKEHI-----LALLPGYAERGFLLLAFDAPRHGEREGPPPSS------- 72 (238)
T ss_dssp TTEEEEE--EEESS----CCEEEEEECCTTCCHHHH-----HHTSTTTGGGTEEEEECCCTTSTTSSCCCCCT-------
T ss_pred CCEEEEE--EecCC----CccEEEEECCCcccchHH-----HHHHHHHHhCCCEEEEecCCCCccCCCCCCcc-------
Confidence 7866544 33443 478999999999999888 46778888899999999999999986532100
Q ss_pred cccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhh
Q 011833 155 ANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLE 234 (476)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (476)
..+.+ ...+ ..+++++.
T Consensus 73 ------------------------------------------~~~~~----------~~~~----------~~~~~~~~- 89 (238)
T 1ufo_A 73 ------------------------------------------KSPRY----------VEEV----------YRVALGFK- 89 (238)
T ss_dssp ------------------------------------------TSTTH----------HHHH----------HHHHHHHH-
T ss_pred ------------------------------------------cccch----------hhhH----------HHHHHHHH-
Confidence 00000 0000 00122333
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhh
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQA 314 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~ 314 (476)
+|+.++++++.+... .+++++||||||.+++.++..+| ..+++++++++........
T Consensus 90 ~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~-----~~~~~~~~~~~~~~~~~~~--------------- 146 (238)
T 1ufo_A 90 EEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGF-----RPRGVLAFIGSGFPMKLPQ--------------- 146 (238)
T ss_dssp HHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTC-----CCSCEEEESCCSSCCCCCT---------------
T ss_pred HHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhcc-----CcceEEEEecCCccchhhh---------------
Confidence 799999999987654 48999999999999999999987 6788888877654221110
Q ss_pred ccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCccc
Q 011833 315 LNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFF 394 (476)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 394 (476)
..+ ...++ .. .+. ...
T Consensus 147 -------------~~~---------------------~~~~~-~~--------------------~~~---------~~~ 162 (238)
T 1ufo_A 147 -------------GQV---------------------VEDPG-VL--------------------ALY---------QAP 162 (238)
T ss_dssp -------------TCC---------------------CCCHH-HH--------------------HHH---------HSC
T ss_pred -------------hhc---------------------cCCcc-cc--------------------hhh---------cCC
Confidence 000 00000 00 000 011
Q ss_pred ccccCCCC-cccEEEEeeCCCCcCCHHHHHHHHHhcC-CC---ceeEEEecCCCCCCCcccccccccCCccchhHHHHHH
Q 011833 395 YKDHIGKT-NVPVLALAADQDLICPTEAVYETVKLIP-EH---LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEF 469 (476)
Q Consensus 395 ~~~~l~~i-~vPvLii~G~~D~~vp~~~~~~~~~~l~-~~---~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~f 469 (476)
....+.++ ++|+|+++|++|.++|.+.++++.+.++ .. .++++++ +++||... .+..+.+.+|
T Consensus 163 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~H~~~-------~~~~~~~~~~ 230 (238)
T 1ufo_A 163 PATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVE-----EGAGHTLT-------PLMARVGLAF 230 (238)
T ss_dssp GGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEE-----TTCCSSCC-------HHHHHHHHHH
T ss_pred hhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEe-----CCCCcccH-------HHHHHHHHHH
Confidence 12345667 8999999999999999999999999998 43 4577777 89999543 2345566666
Q ss_pred HHhh
Q 011833 470 LTRH 473 (476)
Q Consensus 470 L~~~ 473 (476)
|+++
T Consensus 231 l~~~ 234 (238)
T 1ufo_A 231 LEHW 234 (238)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-20 Score=187.42 Aligned_cols=127 Identities=21% Similarity=0.272 Sum_probs=94.3
Q ss_pred ceeeEeeCCCc--eEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHh-CCCcEEEecCCCCCCccc
Q 011833 66 ELHYVAVPNSD--WRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSG-QGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 66 e~~~v~~~~dG--~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~-~Gy~V~~~D~rG~G~S~~ 142 (476)
+...+.+...+ ..++++... +.+|+|||+||++.+...| ..++..|++ .+|+|+++|+||||.|..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~g------~~~p~lvllHG~~~~~~~w-----~~~~~~L~~~~~~~via~Dl~GhG~S~~ 82 (316)
T 3c5v_A 14 SMEDVEVENETGKDTFRVYKSG------SEGPVLLLLHGGGHSALSW-----AVFTAAIISRVQCRIVALDLRSHGETKV 82 (316)
T ss_dssp EEEEEEEEETTEEEEEEEEEEC------SSSCEEEEECCTTCCGGGG-----HHHHHHHHTTBCCEEEEECCTTSTTCBC
T ss_pred ccceEEecCCcceEEEEEEecC------CCCcEEEEECCCCcccccH-----HHHHHHHhhcCCeEEEEecCCCCCCCCC
Confidence 44455542111 456666542 1358899999999999999 578889986 389999999999999965
Q ss_pred ccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLI 222 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (476)
...
T Consensus 83 ~~~----------------------------------------------------------------------------- 85 (316)
T 3c5v_A 83 KNP----------------------------------------------------------------------------- 85 (316)
T ss_dssp SCT-----------------------------------------------------------------------------
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 321
Q ss_pred cccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhc--CCCCCCcccccEEEEeccc
Q 011833 223 VKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSH--CGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 223 ~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~--~p~~~~~~~v~~lvlla~~ 292 (476)
..|++++++ +|+.++++.+... . .+++++|||||||.+++.+|.+ +| . |+++|++++.
T Consensus 86 --~~~~~~~~a-~dl~~~l~~l~~~--~-~~~~~lvGhSmGG~ia~~~A~~~~~p-----~-v~~lvl~~~~ 145 (316)
T 3c5v_A 86 --EDLSAETMA-KDVGNVVEAMYGD--L-PPPIMLIGHSMGGAIAVHTASSNLVP-----S-LLGLCMIDVV 145 (316)
T ss_dssp --TCCCHHHHH-HHHHHHHHHHHTT--C-CCCEEEEEETHHHHHHHHHHHTTCCT-----T-EEEEEEESCC
T ss_pred --cccCHHHHH-HHHHHHHHHHhcc--C-CCCeEEEEECHHHHHHHHHHhhccCC-----C-cceEEEEccc
Confidence 136777777 8999999887421 1 1379999999999999999985 33 4 9999999864
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=192.82 Aligned_cols=235 Identities=15% Similarity=0.187 Sum_probs=159.3
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
+...+. .||.++.++.+.|... ++.|+||++||++++...| ...+..|+++||.|+++|+||+|.|.....
T Consensus 128 ~~v~~~--~dg~~i~~~l~~p~~~--~~~P~vl~~hG~~~~~~~~-----~~~~~~l~~~G~~v~~~d~rG~G~s~~~~~ 198 (386)
T 2jbw_A 128 ERHELV--VDGIPMPVYVRIPEGP--GPHPAVIMLGGLESTKEES-----FQMENLVLDRGMATATFDGPGQGEMFEYKR 198 (386)
T ss_dssp EEEEEE--ETTEEEEEEEECCSSS--CCEEEEEEECCSSCCTTTT-----HHHHHHHHHTTCEEEEECCTTSGGGTTTCC
T ss_pred EEEEEE--eCCEEEEEEEEcCCCC--CCCCEEEEeCCCCccHHHH-----HHHHHHHHhCCCEEEEECCCCCCCCCCCCC
Confidence 444554 3999999999987653 4578899999999888765 356888899999999999999998822111
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
.
T Consensus 199 -------------------------------------------------------------------------------~ 199 (386)
T 2jbw_A 199 -------------------------------------------------------------------------------I 199 (386)
T ss_dssp -------------------------------------------------------------------------------S
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHh
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLL 305 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~ 305 (476)
..++ .+|+.++++++.++...+.++++++|||+||.+++.++.+ | .+|+++|++ +..++..... .
T Consensus 200 ~~~~----~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~-----~~~~a~v~~-~~~~~~~~~~---~- 264 (386)
T 2jbw_A 200 AGDY----EKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-E-----PRLAACISW-GGFSDLDYWD---L- 264 (386)
T ss_dssp CSCH----HHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-C-----TTCCEEEEE-SCCSCSTTGG---G-
T ss_pred CccH----HHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-C-----cceeEEEEe-ccCChHHHHH---h-
Confidence 0111 2457778888877533334589999999999999999988 6 789999999 7765443210 0
Q ss_pred hcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC
Q 011833 306 LPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG 385 (476)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (476)
+ ...+........... ++. ... ...+..
T Consensus 265 --------------~---------------~~~~~~~~~~~~g~~---~~~---------------~~~---~~~~~~-- 292 (386)
T 2jbw_A 265 --------------E---------------TPLTKESWKYVSKVD---TLE---------------EAR---LHVHAA-- 292 (386)
T ss_dssp --------------S---------------CHHHHHHHHHHTTCS---SHH---------------HHH---HHHHHH--
T ss_pred --------------c---------------cHHHHHHHHHHhCCC---CHH---------------HHH---HHHHHh--
Confidence 0 000000000001000 010 000 001100
Q ss_pred ccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhc-CCCceeEEEecCCCCCCCcccccccccCCccchhH
Q 011833 386 LCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLI-PEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 386 ~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
......+.++++|+|+++|++|. +|++.++++++.+ +. .+++.++ ++.||.. .+.+.++++
T Consensus 293 -------~~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~-~~~~~~~-----~~~gH~~----~~~~~~~~~ 354 (386)
T 2jbw_A 293 -------LETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAE-HLNLVVE-----KDGDHCC----HNLGIRPRL 354 (386)
T ss_dssp -------TCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGG-GEEEEEE-----TTCCGGG----GGGTTHHHH
T ss_pred -------CChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCC-CcEEEEe-----CCCCcCC----ccchHHHHH
Confidence 11123577889999999999999 9999999999999 64 4678887 8999942 356789999
Q ss_pred HHHHHHHhh
Q 011833 465 CIIEFLTRH 473 (476)
Q Consensus 465 ~i~~fL~~~ 473 (476)
.|.+||+++
T Consensus 355 ~i~~fl~~~ 363 (386)
T 2jbw_A 355 EMADWLYDV 363 (386)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999876
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-20 Score=180.83 Aligned_cols=226 Identities=13% Similarity=0.097 Sum_probs=153.7
Q ss_pred CCCceEEEEEEEcCCCC-CCCCCCcEEEecCCC---CCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCc
Q 011833 73 PNSDWRLALWRYLPSPA-APQRNHPLLLLSGIG---TNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGE 148 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~-~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~ 148 (476)
+.+|..+.++...+... ..++.|+||++||.+ ++...| ..++..|+++||.|+++|+||+|.|.....
T Consensus 21 ~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~--- 92 (276)
T 3hxk_A 21 LNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRES-----DPLALAFLAQGYQVLLLNYTVMNKGTNYNF--- 92 (276)
T ss_dssp CBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGS-----HHHHHHHHHTTCEEEEEECCCTTSCCCSCT---
T ss_pred CCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhh-----HHHHHHHHHCCCEEEEecCccCCCcCCCCc---
Confidence 56888888876654321 124579999999943 444445 478899999999999999999998753211
Q ss_pred cccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCC
Q 011833 149 DSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWD 228 (476)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (476)
T Consensus 93 -------------------------------------------------------------------------------- 92 (276)
T 3hxk_A 93 -------------------------------------------------------------------------------- 92 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhhccHHHHHHHHHHHhC---CCCCcEeEEEEchHHHHHHHHHhc-CCCCCCcccccEEEEecccccccCChhhHHH
Q 011833 229 FDHYLEEDVPAVMEYIRTLSK---PKDGKLLAVGHSMGGILLYAMLSH-CGFEGKDSGFASVTTLASSLDYRPSNSLLRL 304 (476)
Q Consensus 229 ~~~~~~~Dl~a~i~~l~~~~~---~~~~ki~lvGhS~GG~ia~~~a~~-~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~ 304 (476)
+.. ..+|+.++++++++... .+..+++++||||||.+++.++.+ .+ .+++++|+++|..+.....
T Consensus 93 ~~~-~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~-----~~~~~~v~~~p~~~~~~~~----- 161 (276)
T 3hxk_A 93 LSQ-NLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQI-----HRPKGVILCYPVTSFTFGW----- 161 (276)
T ss_dssp HHH-HHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCST-----TCCSEEEEEEECCBTTSSC-----
T ss_pred Cch-HHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccC-----CCccEEEEecCcccHHhhC-----
Confidence 111 13789999999988752 344689999999999999999987 44 7899999999876543320
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhC
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEG 384 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (476)
+. ..... .+ + .. +
T Consensus 162 --~~---------------------~~~~~------~~----~--~~----~---------------------------- 174 (276)
T 3hxk_A 162 --PS---------------------DLSHF------NF----E--IE----N---------------------------- 174 (276)
T ss_dssp --SS---------------------SSSSS------CC----C--CS----C----------------------------
T ss_pred --Cc---------------------chhhh------hc----C--ch----h----------------------------
Confidence 00 00000 00 0 00 0
Q ss_pred CccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCccccccccc------
Q 011833 385 GLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSR------ 456 (476)
Q Consensus 385 ~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~------ 456 (476)
. ........+.++++|+|+++|++|.++|++.+..+++.+... .++++++ ++.+|.-.....
T Consensus 175 -~----~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~-----~~~~H~~~~~~~~~~~~~ 244 (276)
T 3hxk_A 175 -I----SEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFF-----ESGPHGVSLANRTTAPSD 244 (276)
T ss_dssp -C----GGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEE-----SCCCTTCTTCSTTSCSSS
T ss_pred -h----hhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEE-----CCCCCCccccCccccccc
Confidence 0 001112356678999999999999999999999999988653 3567777 899993322111
Q ss_pred ----CCccchhHHHHHHHHhhc
Q 011833 457 ----LAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 457 ----~~~~~v~~~i~~fL~~~~ 474 (476)
+..+++.+.+.+||+++.
T Consensus 245 ~~~~~~~~~~~~~~~~wl~~~~ 266 (276)
T 3hxk_A 245 AYCLPSVHRWVSWASDWLERQI 266 (276)
T ss_dssp TTCCHHHHTHHHHHHHHHHHHH
T ss_pred cccCchHHHHHHHHHHHHHhCc
Confidence 123678899999999864
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=187.63 Aligned_cols=188 Identities=15% Similarity=0.191 Sum_probs=146.5
Q ss_pred CCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcccccc
Q 011833 74 NSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMIT 153 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~ 153 (476)
.+|.......+ |... .+.|+||++||++++...| ..+++.|+++||.|+++|+||+|.|....
T Consensus 79 ~~g~~~~~~~~-p~~~--~~~p~vv~~HG~~~~~~~~-----~~~~~~la~~G~~vv~~d~~g~g~s~~~~--------- 141 (306)
T 3vis_A 79 ADGFGGGTIYY-PREN--NTYGAIAISPGYTGTQSSI-----AWLGERIASHGFVVIAIDTNTTLDQPDSR--------- 141 (306)
T ss_dssp CSSSCCEEEEE-ESSC--SCEEEEEEECCTTCCHHHH-----HHHHHHHHTTTEEEEEECCSSTTCCHHHH---------
T ss_pred cCCCcceEEEe-eCCC--CCCCEEEEeCCCcCCHHHH-----HHHHHHHHhCCCEEEEecCCCCCCCcchH---------
Confidence 45655333333 4433 2568899999999999888 58999999999999999999999874311
Q ss_pred ccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhh
Q 011833 154 SANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYL 233 (476)
Q Consensus 154 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (476)
T Consensus 142 -------------------------------------------------------------------------------- 141 (306)
T 3vis_A 142 -------------------------------------------------------------------------------- 141 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccHHHHHHHHHHH------hCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhc
Q 011833 234 EEDVPAVMEYIRTL------SKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLP 307 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~------~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~ 307 (476)
.+|+.++++++.+. ...+.++++++||||||.+++.++..+| +|+++|++++...
T Consensus 142 ~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p------~v~~~v~~~~~~~------------- 202 (306)
T 3vis_A 142 ARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRP------DLKAAIPLTPWHL------------- 202 (306)
T ss_dssp HHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCT------TCSEEEEESCCCS-------------
T ss_pred HHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCC------CeeEEEEeccccC-------------
Confidence 25777778888775 3333458999999999999999999876 3889998776421
Q ss_pred CcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCcc
Q 011833 308 LSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLC 387 (476)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (476)
T Consensus 203 -------------------------------------------------------------------------------- 202 (306)
T 3vis_A 203 -------------------------------------------------------------------------------- 202 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCcccccccCCCCcccEEEEeeCCCCcCCHH-HHHHHHHhcCCC-ceeEEEecCCCCCCCcccccccccCCccchhHH
Q 011833 388 DRSGTFFYKDHIGKTNVPVLALAADQDLICPTE-AVYETVKLIPEH-LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPC 465 (476)
Q Consensus 388 ~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~-~~~~~~~~l~~~-~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~ 465 (476)
...+.++++|+|+++|++|.++|++ ..+.+++.+++. .++++++ ++.||... .+.++++.+.
T Consensus 203 --------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~g~gH~~~---~~~~~~~~~~ 266 (306)
T 3vis_A 203 --------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKAYLEL-----DGASHFAP---NITNKTIGMY 266 (306)
T ss_dssp --------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEEEEEE-----TTCCTTGG---GSCCHHHHHH
T ss_pred --------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCCCceEEEE-----CCCCccch---hhchhHHHHH
Confidence 0134567899999999999999998 699999999874 4667777 89999544 5667899999
Q ss_pred HHHHHHhh
Q 011833 466 IIEFLTRH 473 (476)
Q Consensus 466 i~~fL~~~ 473 (476)
+++||+++
T Consensus 267 i~~fl~~~ 274 (306)
T 3vis_A 267 SVAWLKRF 274 (306)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999876
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.85 E-value=6.7e-22 Score=193.44 Aligned_cols=239 Identities=12% Similarity=0.107 Sum_probs=141.3
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhC--CCcEEEecCCCCCCcccccccCccccccccccccCCCccccccc
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQ--GFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRES 169 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~--Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 169 (476)
+.+++|||+||++++...| ..+++.|+++ ||+|+++|+||||.|.....
T Consensus 34 ~~~~~vvllHG~~~~~~~~-----~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~------------------------ 84 (302)
T 1pja_A 34 ASYKPVIVVHGLFDSSYSF-----RHLLEYINETHPGTVVTVLDLFDGRESLRPLW------------------------ 84 (302)
T ss_dssp -CCCCEEEECCTTCCGGGG-----HHHHHHHHHHSTTCCEEECCSSCSGGGGSCHH------------------------
T ss_pred CCCCeEEEECCCCCChhHH-----HHHHHHHHhcCCCcEEEEeccCCCccchhhHH------------------------
Confidence 4578999999999999999 5899999998 99999999999998854221
Q ss_pred chhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhC
Q 011833 170 QSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSK 249 (476)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~ 249 (476)
++ .+|+.+.+..+.+..
T Consensus 85 ---------------------------------------------------------~~-----~~~~~~~l~~~~~~~- 101 (302)
T 1pja_A 85 ---------------------------------------------------------EQ-----VQGFREAVVPIMAKA- 101 (302)
T ss_dssp ---------------------------------------------------------HH-----HHHHHHHHHHHHHHC-
T ss_pred ---------------------------------------------------------HH-----HHHHHHHHHHHhhcC-
Confidence 01 133444444444433
Q ss_pred CCCCcEeEEEEchHHHHHHHHHhcCCCCCCcc-cccEEEEecccccccCCh-hhHHHhhcCcchhhhccCCcCChHHHHH
Q 011833 250 PKDGKLLAVGHSMGGILLYAMLSHCGFEGKDS-GFASVTTLASSLDYRPSN-SLLRLLLPLSDPIQALNVPVIPLGTFLA 327 (476)
Q Consensus 250 ~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~-~v~~lvlla~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (476)
. +++++|||||||.+++.++.++| . +|+++|+++++....... .......+ .........
T Consensus 102 ~--~~~~lvGhS~Gg~ia~~~a~~~p-----~~~v~~lvl~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 163 (302)
T 1pja_A 102 P--QGVHLICYSQGGLVCRALLSVMD-----DHNVDSFISLSSPQMGQYGDTDYLKWLFP-----------TSMRSNLYR 163 (302)
T ss_dssp T--TCEEEEEETHHHHHHHHHHHHCT-----TCCEEEEEEESCCTTCBCSCCHHHHHHCT-----------TCCHHHHHH
T ss_pred C--CcEEEEEECHHHHHHHHHHHhcC-----ccccCEEEEECCCcccccccchhhhhHHH-----------HHHHHHHhh
Confidence 2 48999999999999999999987 5 799999999875432211 11110000 000000000
Q ss_pred hhccCCCCchHHHHHH-HHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccE
Q 011833 328 AIHPFASSPPYVLSWL-KFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPV 406 (476)
Q Consensus 328 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPv 406 (476)
..+..... ... ..... ++.....+... ..+...+.... ......++.+.+.+++ |+
T Consensus 164 ~~~~~~~~-----~~~~~~~~~-----~~~~~~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~l~~i~-P~ 220 (302)
T 1pja_A 164 ICYSPWGQ-----EFSICNYWH-----DPHHDDLYLNA----------SSFLALINGER--DHPNATVWRKNFLRVG-HL 220 (302)
T ss_dssp HHTSTTGG-----GSTGGGGBC-----CTTCHHHHHHH----------CSSHHHHTTSS--CCTTHHHHHHHHTTCS-EE
T ss_pred ccchHHHH-----Hhhhhhccc-----Chhhhhhhhcc----------chHHHHhhcCC--ccccchhHHHHHhccC-cE
Confidence 00000000 000 00000 00000000000 00001111000 0001122455788899 99
Q ss_pred EEEeeCCCCcCCHHHHHHHHHhcCC-------------------------CceeEEEecCCCCCCCcccccccccCCccc
Q 011833 407 LALAADQDLICPTEAVYETVKLIPE-------------------------HLVSFKVFGEPRGPHYAHYDLVGSRLAAYQ 461 (476)
Q Consensus 407 Lii~G~~D~~vp~~~~~~~~~~l~~-------------------------~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~ 461 (476)
|+|+|++|.++|++.++.+.+.+++ ...+++++ +++||+.+ .+.++.
T Consensus 221 lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i-----~~~gH~~~---~e~p~~ 292 (302)
T 1pja_A 221 VLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPM-----AGISHTAW---HSNRTL 292 (302)
T ss_dssp EEEECTTCSSSSSGGGGGTCEECTTCCEECGGGSHHHHTTTTSHHHHHHTTCEEEEEC-----SSCCTTTT---TSCHHH
T ss_pred EEEEeCCCCccchhHhhHhhhcCCcccccchhhhhhhhhhhhchhhHhhcCCeEEEEe-----cCcccccc---ccCHHH
Confidence 9999999999999888877665553 12577776 89999544 678899
Q ss_pred hhHHHHHHHH
Q 011833 462 VYPCIIEFLT 471 (476)
Q Consensus 462 v~~~i~~fL~ 471 (476)
+.+.|.+||+
T Consensus 293 ~~~~i~~fl~ 302 (302)
T 1pja_A 293 YETCIEPWLS 302 (302)
T ss_dssp HHHHTGGGCC
T ss_pred HHHHHHHhcC
Confidence 9999999873
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-20 Score=181.44 Aligned_cols=229 Identities=11% Similarity=0.108 Sum_probs=149.3
Q ss_pred eCCCceEEEEEEEcCCC----CCCCCCCcEEEecC---CCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccc
Q 011833 72 VPNSDWRLALWRYLPSP----AAPQRNHPLLLLSG---IGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 72 ~~~dG~~L~~~~~~p~~----~~~~~~~~VlllHG---~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
+..+|..+.+..|.|.. ...++.|+||++|| .+++...| ..++..|+++||.|+++|+||+|.+..
T Consensus 9 ~~~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~g~g~~~~-- 81 (277)
T 3bxp_A 9 LNTAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGREE-----APIATRMMAAGMHTVVLNYQLIVGDQS-- 81 (277)
T ss_dssp ECSTTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCTTH-----HHHHHHHHHTTCEEEEEECCCSTTTCC--
T ss_pred eccCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCccc-----hHHHHHHHHCCCEEEEEecccCCCCCc--
Confidence 35578888888887762 12345789999999 55665556 478899999999999999999984321
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
.
T Consensus 82 ~------------------------------------------------------------------------------- 82 (277)
T 3bxp_A 82 V------------------------------------------------------------------------------- 82 (277)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred cCCCchhhhhccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCC---------CCCcccccEEEEeccc
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGF---------EGKDSGFASVTTLASS 292 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~---------~~~~~~v~~lvlla~~ 292 (476)
+.. ..+|+.++++++.+.. +.+.++++++||||||.+++.++.+++- .....+++++|+++|.
T Consensus 83 ----~~~-~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~ 157 (277)
T 3bxp_A 83 ----YPW-ALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPV 157 (277)
T ss_dssp ----TTH-HHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCC
T ss_pred ----Cch-HHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCc
Confidence 001 1367888888887763 2333589999999999999999987520 0012679999999987
Q ss_pred ccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHH-HHhhhccCCCCH
Q 011833 293 LDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFE-KLIFSNFGNIPT 371 (476)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 371 (476)
.+..... ... ..+. .+..
T Consensus 158 ~~~~~~~----------------------------------~~~-------------------~~~~~~~~~-------- 176 (277)
T 3bxp_A 158 IDLTAGF----------------------------------PTT-------------------SAARNQITT-------- 176 (277)
T ss_dssp CBTTSSS----------------------------------SSS-------------------HHHHHHHCS--------
T ss_pred ccCCCCC----------------------------------CCc-------------------cccchhccc--------
Confidence 6533210 000 0000 0000
Q ss_pred HHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcc
Q 011833 372 KLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAH 449 (476)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH 449 (476)
... .......+.++.+|+|+++|++|.++|++.++++.+.+++. .++++++ ++++|
T Consensus 177 -------------~~~----~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~-----~~~~H 234 (277)
T 3bxp_A 177 -------------DAR----LWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLF-----GSGIH 234 (277)
T ss_dssp -------------CGG----GSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEEC-----CCC--
T ss_pred -------------hhh----hcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEe-----CCCCc
Confidence 000 01112245667899999999999999999999999887543 4567776 89999
Q ss_pred ccccccc------------CCccchhHHHHHHHHhhc
Q 011833 450 YDLVGSR------------LAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 450 ~~~~~~~------------~~~~~v~~~i~~fL~~~~ 474 (476)
.-..... +..+++++.+++||+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 235 GLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 3222111 224788999999998763
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=202.17 Aligned_cols=238 Identities=17% Similarity=0.168 Sum_probs=163.7
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCC--cceeecCCCCCHHHHHHhCCCcEEEecCCC---CCCc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTN--AIGYDLSPEYSFARYMSGQGFDTWILEVRG---AGLS 140 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~--~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG---~G~S 140 (476)
+...+. +.+|..+.++.+.|.... .+.|+||++||.+.+ ...| ..+++.|+++||.|+++|+|| +|.|
T Consensus 334 ~~~~~~-~~~g~~i~~~~~~p~~~~-~~~p~vv~~HG~~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~rG~~~~G~s 406 (582)
T 3o4h_A 334 RLVWVE-SFDGSRVPTYVLESGRAP-TPGPTVVLVHGGPFAEDSDSW-----DTFAASLAAAGFHVVMPNYRGSTGYGEE 406 (582)
T ss_dssp EEEEEE-CTTSCEEEEEEEEETTSC-SSEEEEEEECSSSSCCCCSSC-----CHHHHHHHHTTCEEEEECCTTCSSSCHH
T ss_pred eEEEEE-CCCCCEEEEEEEcCCCCC-CCCcEEEEECCCccccccccc-----CHHHHHHHhCCCEEEEeccCCCCCCchh
Confidence 344454 569999999999887542 257899999998766 5556 588999999999999999999 4444
Q ss_pred ccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhh
Q 011833 141 AHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLD 220 (476)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (476)
......
T Consensus 407 ~~~~~~-------------------------------------------------------------------------- 412 (582)
T 3o4h_A 407 WRLKII-------------------------------------------------------------------------- 412 (582)
T ss_dssp HHHTTT--------------------------------------------------------------------------
T ss_pred HHhhhh--------------------------------------------------------------------------
Confidence 211100
Q ss_pred cccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh
Q 011833 221 LIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS 300 (476)
Q Consensus 221 ~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~ 300 (476)
-.+.....+|+.++++++.++...+ +++++||||||.+++.++.++| .+++++|++++..++...
T Consensus 413 ------~~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p-----~~~~~~v~~~~~~~~~~~-- 477 (582)
T 3o4h_A 413 ------GDPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKP-----GLFKAGVAGASVVDWEEM-- 477 (582)
T ss_dssp ------TCTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHST-----TTSSCEEEESCCCCHHHH--
T ss_pred ------hhcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCC-----CceEEEEEcCCccCHHHH--
Confidence 0011122479999999998875444 8999999999999999999987 889999999986542210
Q ss_pred hHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHH
Q 011833 301 LLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTV 380 (476)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (476)
. . ........+....+. .+++.+..+
T Consensus 478 ----~-------------------------~--~~~~~~~~~~~~~~~----~~~~~~~~~------------------- 503 (582)
T 3o4h_A 478 ----Y-------------------------E--LSDAAFRNFIEQLTG----GSREIMRSR------------------- 503 (582)
T ss_dssp ----H-------------------------H--TCCHHHHHHHHHHTT----TCHHHHHHT-------------------
T ss_pred ----h-------------------------h--cccchhHHHHHHHcC----cCHHHHHhc-------------------
Confidence 0 0 000000011111111 111111110
Q ss_pred HHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCC
Q 011833 381 FQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLA 458 (476)
Q Consensus 381 ~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~ 458 (476)
.....+.++++|+|+++|++|.++|++.++++++.++.. .++++++ |+.||... ..+.
T Consensus 504 -------------sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~-----~~~gH~~~--~~~~ 563 (582)
T 3o4h_A 504 -------------SPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHII-----PDAGHAIN--TMED 563 (582)
T ss_dssp -------------CGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEE-----TTCCSSCC--BHHH
T ss_pred -------------CHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEE-----CCCCCCCC--ChHH
Confidence 011356778999999999999999999999999988652 3567777 89999432 2455
Q ss_pred ccchhHHHHHHHHhh
Q 011833 459 AYQVYPCIIEFLTRH 473 (476)
Q Consensus 459 ~~~v~~~i~~fL~~~ 473 (476)
+.++++.+++||+++
T Consensus 564 ~~~~~~~i~~fl~~~ 578 (582)
T 3o4h_A 564 AVKILLPAVFFLATQ 578 (582)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 688999999999986
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-20 Score=180.51 Aligned_cols=212 Identities=12% Similarity=0.092 Sum_probs=149.8
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCC---CCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccc
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGI---GTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~---~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
..+. -.+|..+.+..|.|.. +.+|+||++||. +++...| ..++..|+++||.|+++|+||+|..
T Consensus 41 ~~i~-~~~~~~~~~~~~~p~~---~~~p~vv~~HGgg~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~~~~~~---- 107 (262)
T 2pbl_A 41 LNLS-YGEGDRHKFDLFLPEG---TPVGLFVFVHGGYWMAFDKSSW-----SHLAVGALSKGWAVAMPSYELCPEV---- 107 (262)
T ss_dssp EEEE-SSSSTTCEEEEECCSS---SCSEEEEEECCSTTTSCCGGGC-----GGGGHHHHHTTEEEEEECCCCTTTS----
T ss_pred cccc-cCCCCCceEEEEccCC---CCCCEEEEEcCcccccCChHHH-----HHHHHHHHhCCCEEEEeCCCCCCCC----
Confidence 3444 2456666677776653 357899999995 3677777 5789999999999999999998743
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
T Consensus 108 -------------------------------------------------------------------------------- 107 (262)
T 2pbl_A 108 -------------------------------------------------------------------------------- 107 (262)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC------CCCCCcccccEEEEecccccccCC
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC------GFEGKDSGFASVTTLASSLDYRPS 298 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~------p~~~~~~~v~~lvlla~~~~~~~~ 298 (476)
++.++. +|+.++++++..... ++++++||||||.+++.++.++ | .+|+++|++++..+....
T Consensus 108 ---~~~~~~-~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~-----~~v~~~vl~~~~~~~~~~ 175 (262)
T 2pbl_A 108 ---RISEIT-QQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVG-----ARIRNVVPISPLSDLRPL 175 (262)
T ss_dssp ---CHHHHH-HHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHH-----TTEEEEEEESCCCCCGGG
T ss_pred ---ChHHHH-HHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhcccccccccc-----ccceEEEEecCccCchHH
Confidence 122333 799999999988754 4899999999999999999876 4 789999999987653221
Q ss_pred hhhHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHH
Q 011833 299 NSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLT 378 (476)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (476)
. . .. ....+. ...+....
T Consensus 176 ~---~---------------------------~~----------~~~~~~----~~~~~~~~------------------ 193 (262)
T 2pbl_A 176 L---R---------------------------TS----------MNEKFK----MDADAAIA------------------ 193 (262)
T ss_dssp G---G---------------------------ST----------THHHHC----CCHHHHHH------------------
T ss_pred H---h---------------------------hh----------hhhhhC----CCHHHHHh------------------
Confidence 0 0 00 000000 01110000
Q ss_pred HHHHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCC
Q 011833 379 TVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLA 458 (476)
Q Consensus 379 ~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~ 458 (476)
......+.++++|+|+++|++|.++|.+.++.+.+.++ ++++++ +++||+.+ .+.
T Consensus 194 --------------~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~---~~~~~~-----~~~~H~~~---~~~ 248 (262)
T 2pbl_A 194 --------------ESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD---ADHVIA-----FEKHHFNV---IEP 248 (262)
T ss_dssp --------------TCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT---CEEEEE-----TTCCTTTT---TGG
T ss_pred --------------cCcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC---CeEEEe-----CCCCcchH---Hhh
Confidence 00012456789999999999999999999999999998 478877 89999655 555
Q ss_pred ccchhHHHHHHHH
Q 011833 459 AYQVYPCIIEFLT 471 (476)
Q Consensus 459 ~~~v~~~i~~fL~ 471 (476)
+..+...+.+++-
T Consensus 249 ~~~~~~~l~~~l~ 261 (262)
T 2pbl_A 249 LADPESDLVAVIT 261 (262)
T ss_dssp GGCTTCHHHHHHH
T ss_pred cCCCCcHHHHHHh
Confidence 6666677776653
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-20 Score=186.11 Aligned_cols=261 Identities=15% Similarity=0.201 Sum_probs=158.7
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccccc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEF 146 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~ 146 (476)
...+. +.||..+.++.+.|... .++.|+||++||++.+...+ .....|+++||.|+++|+||+|.|......
T Consensus 70 ~~~~~-~~dg~~i~~~~~~P~~~-~~~~p~vv~~HG~g~~~~~~------~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~ 141 (337)
T 1vlq_A 70 DVTFS-GYRGQRIKGWLLVPKLE-EEKLPCVVQYIGYNGGRGFP------HDWLFWPSMGYICFVMDTRGQGSGWLKGDT 141 (337)
T ss_dssp EEEEE-CGGGCEEEEEEEEECCS-CSSEEEEEECCCTTCCCCCG------GGGCHHHHTTCEEEEECCTTCCCSSSCCCC
T ss_pred EEEEE-cCCCCEEEEEEEecCCC-CCCccEEEEEcCCCCCCCCc------hhhcchhhCCCEEEEecCCCCCCcccCCCC
Confidence 33444 46899999999988652 24568899999998876554 345577889999999999999987542110
Q ss_pred CccccccccccccCCC-cccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 147 GEDSMITSANAKSTGG-TTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
. + -| .|. ...| .++...| .. ...
T Consensus 142 ~-~---~p-----~~~~~~~~--------------------~~~~~~g------------------~~---------~~~ 165 (337)
T 1vlq_A 142 P-D---YP-----EGPVDPQY--------------------PGFMTRG------------------IL---------DPR 165 (337)
T ss_dssp C-B---CC-----SSSBCCCC--------------------SSSTTTT------------------TT---------CTT
T ss_pred c-c---cc-----cccCCCCC--------------------CcccccC------------------CC---------CHH
Confidence 0 0 00 000 0000 0000000 00 001
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHh
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLL 305 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~ 305 (476)
+|.+.... +|+.++++++.++...+.++++++||||||.+++.++..+| +|+++|+++|....... .
T Consensus 166 ~~~~~~~~-~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p------~v~~~vl~~p~~~~~~~------~ 232 (337)
T 1vlq_A 166 TYYYRRVF-TDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK------KAKALLCDVPFLCHFRR------A 232 (337)
T ss_dssp TCHHHHHH-HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS------SCCEEEEESCCSCCHHH------H
T ss_pred HhHHHHHH-HHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC------CccEEEECCCcccCHHH------H
Confidence 23344444 79999999998875544468999999999999999998865 48999988875431100 0
Q ss_pred hcCcchhhhccCCcCChHHHHHhhccCCCCchH--HHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHh
Q 011833 306 LPLSDPIQALNVPVIPLGTFLAAIHPFASSPPY--VLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQE 383 (476)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (476)
.. ... ..++ +..++.. .+. ...+.+.. +.
T Consensus 233 --------------------~~-~~~---~~~~~~~~~~~~~---~~~-~~~~~~~~--------------------~~- 263 (337)
T 1vlq_A 233 --------------------VQ-LVD---THPYAEITNFLKT---HRD-KEEIVFRT--------------------LS- 263 (337)
T ss_dssp --------------------HH-HCC---CTTHHHHHHHHHH---CTT-CHHHHHHH--------------------HH-
T ss_pred --------------------Hh-cCC---CcchHHHHHHHHh---Cch-hHHHHHHh--------------------hh-
Confidence 00 000 0000 0001100 000 00000000 00
Q ss_pred CCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchh
Q 011833 384 GGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVY 463 (476)
Q Consensus 384 ~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~ 463 (476)
.++....+.++++|+|+++|++|.++|++.+.++++.++. .+++.++ +++||... ..+..
T Consensus 264 --------~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~-~~~~~~~-----~~~gH~~~------~~~~~ 323 (337)
T 1vlq_A 264 --------YFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAG-PKEIRIY-----PYNNHEGG------GSFQA 323 (337)
T ss_dssp --------TTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEE-----TTCCTTTT------HHHHH
T ss_pred --------hccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcCC-CcEEEEc-----CCCCCCCc------chhhH
Confidence 0111124567889999999999999999999999999986 3678877 89999421 24567
Q ss_pred HHHHHHHHhh
Q 011833 464 PCIIEFLTRH 473 (476)
Q Consensus 464 ~~i~~fL~~~ 473 (476)
+.+++||.++
T Consensus 324 ~~~~~fl~~~ 333 (337)
T 1vlq_A 324 VEQVKFLKKL 333 (337)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888998765
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.9e-20 Score=201.34 Aligned_cols=243 Identities=14% Similarity=0.185 Sum_probs=162.8
Q ss_pred ceeeEeeCCCc-eEEEEEEEcCCCCCC-CCCCcEEEecCCCCCc---ceeecCCCCCHHHHHHhCCCcEEEecCCCCCCc
Q 011833 66 ELHYVAVPNSD-WRLALWRYLPSPAAP-QRNHPLLLLSGIGTNA---IGYDLSPEYSFARYMSGQGFDTWILEVRGAGLS 140 (476)
Q Consensus 66 e~~~v~~~~dG-~~L~~~~~~p~~~~~-~~~~~VlllHG~~~~~---~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S 140 (476)
+...+. +.|| ..+.++.+.|....+ ++.|+||++||.+.+. ..|... ...+++.|+++||.|+++|+||+|.|
T Consensus 456 ~~~~~~-~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~-~~~~~~~la~~G~~v~~~d~rG~g~s 533 (706)
T 2z3z_A 456 RTGTIM-AADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSS-VGGWDIYMAQKGYAVFTVDSRGSANR 533 (706)
T ss_dssp EEEEEE-CTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC-----CCHHHHHHHTTCEEEEECCTTCSSS
T ss_pred EEEEEE-cCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccC-chHHHHHHHhCCcEEEEEecCCCccc
Confidence 334444 5788 899999998865322 2457899999976655 345210 01378999999999999999999987
Q ss_pred ccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhh
Q 011833 141 AHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLD 220 (476)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (476)
....... .
T Consensus 534 ~~~~~~~---------------------------------------------------------------~--------- 541 (706)
T 2z3z_A 534 GAAFEQV---------------------------------------------------------------I--------- 541 (706)
T ss_dssp CHHHHHT---------------------------------------------------------------T---------
T ss_pred chhHHHH---------------------------------------------------------------H---------
Confidence 5421100 0
Q ss_pred cccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh
Q 011833 221 LIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS 300 (476)
Q Consensus 221 ~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~ 300 (476)
.-.+.....+|+.++++++.++...+.++++++||||||.+++.++.++| .+++++|+++|..++.....
T Consensus 542 -----~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p-----~~~~~~v~~~~~~~~~~~~~ 611 (706)
T 2z3z_A 542 -----HRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHG-----DVFKVGVAGGPVIDWNRYAI 611 (706)
T ss_dssp -----TTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHST-----TTEEEEEEESCCCCGGGSBH
T ss_pred -----hhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCC-----CcEEEEEEcCCccchHHHHh
Confidence 00111222478999999987654333458999999999999999999987 78999999998765321100
Q ss_pred hHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHH
Q 011833 301 LLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTV 380 (476)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (476)
.+...++..+. .+++.+...
T Consensus 612 ----------------------------------------~~~~~~~~~~~-~~~~~~~~~------------------- 631 (706)
T 2z3z_A 612 ----------------------------------------MYGERYFDAPQ-ENPEGYDAA------------------- 631 (706)
T ss_dssp ----------------------------------------HHHHHHHCCTT-TCHHHHHHH-------------------
T ss_pred ----------------------------------------hhhhhhcCCcc-cChhhhhhC-------------------
Confidence 00000111110 011111110
Q ss_pred HHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCC
Q 011833 381 FQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLA 458 (476)
Q Consensus 381 ~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~ 458 (476)
.....+.++++|+|+++|++|.++|++.++++++.+++. .+++.++ |++||... .+.
T Consensus 632 -------------~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~-----~~~gH~~~---~~~ 690 (706)
T 2z3z_A 632 -------------NLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVY-----PSHEHNVM---GPD 690 (706)
T ss_dssp -------------CGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEE-----TTCCSSCC---TTH
T ss_pred -------------CHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEe-----CCCCCCCC---ccc
Confidence 112356778999999999999999999999999988643 3567777 89999433 346
Q ss_pred ccchhHHHHHHHHhh
Q 011833 459 AYQVYPCIIEFLTRH 473 (476)
Q Consensus 459 ~~~v~~~i~~fL~~~ 473 (476)
++++++.|.+||+++
T Consensus 691 ~~~~~~~i~~fl~~~ 705 (706)
T 2z3z_A 691 RVHLYETITRYFTDH 705 (706)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 789999999999875
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-20 Score=183.36 Aligned_cols=227 Identities=13% Similarity=0.091 Sum_probs=147.7
Q ss_pred CCCceEEEEEEEcCCCC----CCCCCCcEEEecCCC---CCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 73 PNSDWRLALWRYLPSPA----APQRNHPLLLLSGIG---TNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~----~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
+.+|..+.+..| |... +.++.|+||++||.+ ++...| ..++..|+++||.|+++|+||+|.+...
T Consensus 26 ~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~g~~~~~~~-- 97 (283)
T 3bjr_A 26 KLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQA-----ESLAMAFAGHGYQAFYLEYTLLTDQQPL-- 97 (283)
T ss_dssp ECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHH-----HHHHHHHHTTTCEEEEEECCCTTTCSSC--
T ss_pred ecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCcccc-----HHHHHHHHhCCcEEEEEeccCCCccccC--
Confidence 457777777777 4431 234678999999944 444446 4788999999999999999999876200
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
T Consensus 98 -------------------------------------------------------------------------------- 97 (283)
T 3bjr_A 98 -------------------------------------------------------------------------------- 97 (283)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCchhhhhccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCC--------CCcccccEEEEeccccc
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFE--------GKDSGFASVTTLASSLD 294 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~--------~~~~~v~~lvlla~~~~ 294 (476)
+.. ..+|+.++++++++.. +.+..+++++||||||.+++.++.++|-. ....+++++++++|..+
T Consensus 98 ---~~~-~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~ 173 (283)
T 3bjr_A 98 ---GLA-PVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVIS 173 (283)
T ss_dssp ---BTH-HHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCC
T ss_pred ---chh-HHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccc
Confidence 001 1257888888887643 33335899999999999999999987600 00023889998888764
Q ss_pred ccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHH
Q 011833 295 YRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLI 374 (476)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (476)
..... +.. ......+ +
T Consensus 174 ~~~~~---------------------~~~--~~~~~~~--------------------~--------------------- 189 (283)
T 3bjr_A 174 PLLGF---------------------PKD--DATLATW--------------------T--------------------- 189 (283)
T ss_dssp TTSBC-------------------------------CC--------------------C---------------------
T ss_pred ccccc---------------------ccc--cchHHHH--------------------H---------------------
Confidence 32210 000 0000000 0
Q ss_pred HHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCccccc
Q 011833 375 SQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDL 452 (476)
Q Consensus 375 ~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~ 452 (476)
+... .......+.++++|+|+++|++|.++|++.+..+.+.+++. .++++++ ++++|.-.
T Consensus 190 ---------~~~~----~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~~~~~~~-----~~~~H~~~ 251 (283)
T 3bjr_A 190 ---------PTPN----ELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAKIPYELHVF-----KHGPHGLA 251 (283)
T ss_dssp ---------CCGG----GGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTCCEEEEEE-----CCCSHHHH
T ss_pred ---------HHhH----hcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCCCeEEEEe-----CCCCcccc
Confidence 0000 01112346678999999999999999999999999988643 4577777 89999432
Q ss_pred cccc----------CCccchhHHHHHHHHhh
Q 011833 453 VGSR----------LAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 453 ~~~~----------~~~~~v~~~i~~fL~~~ 473 (476)
.... ...+++.+.+++||+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 252 LANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp HHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred cccccccccccccchhHHHHHHHHHHHHhhc
Confidence 2211 23478999999999876
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-20 Score=193.38 Aligned_cols=122 Identities=12% Similarity=0.163 Sum_probs=96.9
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhC---------CCcEEEecCCCCCCcccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQ---------GFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~---------Gy~V~~~D~rG~G~S~~~ 143 (476)
+.||..+++.+..+.. +.+++|||+||++++...| ..++..|++. ||+|+++|+||||.|++.
T Consensus 74 ~i~g~~i~~~~~~~~~---~~~~plll~HG~~~s~~~~-----~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~ 145 (388)
T 4i19_A 74 EIDGATIHFLHVRSPE---PDATPMVITHGWPGTPVEF-----LDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPL 145 (388)
T ss_dssp EETTEEEEEEEECCSS---TTCEEEEEECCTTCCGGGG-----HHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCC
T ss_pred EECCeEEEEEEccCCC---CCCCeEEEECCCCCCHHHH-----HHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 3499999998875542 2468999999999999999 5888999876 999999999999999764
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
..
T Consensus 146 ~~------------------------------------------------------------------------------ 147 (388)
T 4i19_A 146 KS------------------------------------------------------------------------------ 147 (388)
T ss_dssp SS------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 32
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
..|++++++ +|+.++++. .+. ++++++||||||.+++.++.++| ++|++++++++..
T Consensus 148 -~~~~~~~~a-~~~~~l~~~----lg~--~~~~l~G~S~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~ 204 (388)
T 4i19_A 148 -AGWELGRIA-MAWSKLMAS----LGY--ERYIAQGGDIGAFTSLLLGAIDP-----SHLAGIHVNLLQT 204 (388)
T ss_dssp -CCCCHHHHH-HHHHHHHHH----TTC--SSEEEEESTHHHHHHHHHHHHCG-----GGEEEEEESSCCC
T ss_pred -CCCCHHHHH-HHHHHHHHH----cCC--CcEEEEeccHHHHHHHHHHHhCh-----hhceEEEEecCCC
Confidence 024555555 556555554 344 38999999999999999999998 8999999998644
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.6e-20 Score=204.45 Aligned_cols=244 Identities=14% Similarity=0.128 Sum_probs=163.9
Q ss_pred ceeeEeeCCCc-eEEEEEEEcCCCCC-CCCCCcEEEecCCCCCc---ceeecCCCCCHHHHHHhCCCcEEEecCCCCCCc
Q 011833 66 ELHYVAVPNSD-WRLALWRYLPSPAA-PQRNHPLLLLSGIGTNA---IGYDLSPEYSFARYMSGQGFDTWILEVRGAGLS 140 (476)
Q Consensus 66 e~~~v~~~~dG-~~L~~~~~~p~~~~-~~~~~~VlllHG~~~~~---~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S 140 (476)
+...+. +.|| ..+.++.+.|.... .++.|+||++||.+.+. ..|.......+++.|+++||.|+++|+||+|.|
T Consensus 488 ~~~~~~-~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s 566 (741)
T 2ecf_A 488 EFGTLT-AADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRR 566 (741)
T ss_dssp EEEEEE-CTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSS
T ss_pred EEEEEE-cCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCCC
Confidence 444555 5799 99999999886521 23457899999998774 345200000378999999999999999999997
Q ss_pred ccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhh
Q 011833 141 AHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLD 220 (476)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (476)
.......
T Consensus 567 ~~~~~~~------------------------------------------------------------------------- 573 (741)
T 2ecf_A 567 GRDFGGA------------------------------------------------------------------------- 573 (741)
T ss_dssp CHHHHHT-------------------------------------------------------------------------
T ss_pred ChhhhHH-------------------------------------------------------------------------
Confidence 5421100
Q ss_pred cccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh
Q 011833 221 LIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS 300 (476)
Q Consensus 221 ~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~ 300 (476)
....+..+..+|+.++++++.++...+..+++++||||||.+++.++.++| .+++++|++++..++.....
T Consensus 574 ----~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p-----~~~~~~v~~~~~~~~~~~~~ 644 (741)
T 2ecf_A 574 ----LYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKAS-----DSYACGVAGAPVTDWGLYDS 644 (741)
T ss_dssp ----TTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCT-----TTCSEEEEESCCCCGGGSBH
T ss_pred ----HhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCC-----CceEEEEEcCCCcchhhhcc
Confidence 001122233579999999998864334458999999999999999999987 78999999998765321100
Q ss_pred hHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHH
Q 011833 301 LLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTV 380 (476)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (476)
.+...+...+. .+++.+..
T Consensus 645 ----------------------------------------~~~~~~~~~~~-~~~~~~~~-------------------- 663 (741)
T 2ecf_A 645 ----------------------------------------HYTERYMDLPA-RNDAGYRE-------------------- 663 (741)
T ss_dssp ----------------------------------------HHHHHHHCCTG-GGHHHHHH--------------------
T ss_pred ----------------------------------------ccchhhcCCcc-cChhhhhh--------------------
Confidence 00000000000 00110000
Q ss_pred HHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCC
Q 011833 381 FQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLA 458 (476)
Q Consensus 381 ~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~ 458 (476)
......+.++++|+|+++|++|.++|++.++++++.++.. .++++++ +++||... .+.
T Consensus 664 ------------~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~H~~~---~~~ 723 (741)
T 2ecf_A 664 ------------ARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTY-----PGAKHGLS---GAD 723 (741)
T ss_dssp ------------HCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEE-----TTCCSSCC---HHH
T ss_pred ------------cCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEE-----CCCCCCCC---CCc
Confidence 0011346778899999999999999999999999988654 3467777 89999543 333
Q ss_pred ccchhHHHHHHHHhh
Q 011833 459 AYQVYPCIIEFLTRH 473 (476)
Q Consensus 459 ~~~v~~~i~~fL~~~ 473 (476)
++++++.|++||+++
T Consensus 724 ~~~~~~~i~~fl~~~ 738 (741)
T 2ecf_A 724 ALHRYRVAEAFLGRC 738 (741)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHh
Confidence 488999999999876
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-19 Score=196.96 Aligned_cols=244 Identities=16% Similarity=0.154 Sum_probs=163.2
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCC-----CCCCCcEEEecCCCCCcc--eeecCCCCCHHHHHHhCCCcEEEecCCC--
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAA-----PQRNHPLLLLSGIGTNAI--GYDLSPEYSFARYMSGQGFDTWILEVRG-- 136 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~-----~~~~~~VlllHG~~~~~~--~~~~~~~~~l~~~L~~~Gy~V~~~D~rG-- 136 (476)
+...+. ..||..+.++.+.|.... .++.|+||++||++.+.. .| ..+++.|+++||.|+++|+||
T Consensus 392 ~~~~~~-~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~rG~~ 465 (662)
T 3azo_A 392 QIRTFT-APDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVL-----DLDVAYFTSRGIGVADVNYGGST 465 (662)
T ss_dssp EEEEEE-CTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSC-----CHHHHHHHTTTCEEEEEECTTCS
T ss_pred eEEEEE-cCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccc-----hHHHHHHHhCCCEEEEECCCCCC
Confidence 334444 568999999999886531 235688999999987665 55 578899999999999999999
Q ss_pred -CCCcccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHH
Q 011833 137 -AGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDF 215 (476)
Q Consensus 137 -~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (476)
+|.|.....
T Consensus 466 ~~G~~~~~~~---------------------------------------------------------------------- 475 (662)
T 3azo_A 466 GYGRAYRERL---------------------------------------------------------------------- 475 (662)
T ss_dssp SSCHHHHHTT----------------------------------------------------------------------
T ss_pred CccHHHHHhh----------------------------------------------------------------------
Confidence 665422110
Q ss_pred HhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 216 QKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
.-.+..+..+|+.++++++.++...+.++++++||||||.+++.++.+ | .+++++|++++..++
T Consensus 476 ----------~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~-----~~~~~~v~~~~~~~~ 539 (662)
T 3azo_A 476 ----------RGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-T-----DVYACGTVLYPVLDL 539 (662)
T ss_dssp ----------TTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-C-----CCCSEEEEESCCCCH
T ss_pred ----------ccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-c-----CceEEEEecCCccCH
Confidence 001112234789999999988755555699999999999999998875 6 789999999887542
Q ss_pred cCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHH
Q 011833 296 RPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLIS 375 (476)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (476)
... ... . ...+...+....+.... .+.+.+..
T Consensus 540 ~~~------~~~------------------------~--~~~~~~~~~~~~~~~~~-~~~~~~~~--------------- 571 (662)
T 3azo_A 540 LGW------ADG------------------------G--THDFESRYLDFLIGSFE-EFPERYRD--------------- 571 (662)
T ss_dssp HHH------HTT------------------------C--SCGGGTTHHHHHTCCTT-TCHHHHHH---------------
T ss_pred HHH------hcc------------------------c--ccchhhHhHHHHhCCCc-cchhHHHh---------------
Confidence 210 000 0 00000011111111100 01111100
Q ss_pred HHHHHHHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccc
Q 011833 376 QLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLV 453 (476)
Q Consensus 376 ~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~ 453 (476)
......+.++++|+|+++|++|.++|++.++++++.+++. .++++++ ++.||.-
T Consensus 572 -----------------~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~-----~~~gH~~-- 627 (662)
T 3azo_A 572 -----------------RAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSF-----EGEGHGF-- 627 (662)
T ss_dssp -----------------TCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEE-----TTCCSSC--
T ss_pred -----------------hChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEE-----CCCCCCC--
Confidence 0011356778899999999999999999999999999865 3567776 8999942
Q ss_pred cccCCccchhHHHHHHHHhh
Q 011833 454 GSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 454 ~~~~~~~~v~~~i~~fL~~~ 473 (476)
...+.+.++++.+++||+++
T Consensus 628 ~~~~~~~~~~~~~~~fl~~~ 647 (662)
T 3azo_A 628 RRKETMVRALEAELSLYAQV 647 (662)
T ss_dssp CSHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHH
Confidence 22455688999999999876
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-20 Score=166.11 Aligned_cols=173 Identities=12% Similarity=0.144 Sum_probs=132.0
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
++|+||++||++++...|.. ..+++.|+++||.|+++|+||+|.|.....
T Consensus 3 ~~~~vv~~HG~~~~~~~~~~---~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~--------------------------- 52 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALKV---TALAEVAERLGWTHERPDFTDLDARRDLGQ--------------------------- 52 (176)
T ss_dssp SSCEEEEECCTTCCTTSHHH---HHHHHHHHHTTCEEECCCCHHHHTCGGGCT---------------------------
T ss_pred CCcEEEEEeCCCCCccHHHH---HHHHHHHHHCCCEEEEeCCCCCCCCCCCCC---------------------------
Confidence 46889999999988775520 268889999999999999999999853211
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
..+ ..+++.++++++.+....
T Consensus 53 --------------------------------------------------------~~~-~~~~~~~~~~~~~~~~~~-- 73 (176)
T 2qjw_A 53 --------------------------------------------------------LGD-VRGRLQRLLEIARAATEK-- 73 (176)
T ss_dssp --------------------------------------------------------TCC-HHHHHHHHHHHHHHHHTT--
T ss_pred --------------------------------------------------------CCC-HHHHHHHHHHHHHhcCCC--
Confidence 011 124666677777776533
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccC
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPF 332 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (476)
++++++||||||.+++.++.++| ++++|++++.......
T Consensus 74 ~~~~l~G~S~Gg~~a~~~a~~~~-------~~~~v~~~~~~~~~~~---------------------------------- 112 (176)
T 2qjw_A 74 GPVVLAGSSLGSYIAAQVSLQVP-------TRALFLMVPPTKMGPL---------------------------------- 112 (176)
T ss_dssp SCEEEEEETHHHHHHHHHHTTSC-------CSEEEEESCCSCBTTB----------------------------------
T ss_pred CCEEEEEECHHHHHHHHHHHhcC-------hhheEEECCcCCcccc----------------------------------
Confidence 48999999999999999998854 8999999876532110
Q ss_pred CCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeC
Q 011833 333 ASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAAD 412 (476)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~ 412 (476)
..+.++++|+++++|+
T Consensus 113 ----------------------------------------------------------------~~~~~~~~P~l~i~g~ 128 (176)
T 2qjw_A 113 ----------------------------------------------------------------PALDAAAVPISIVHAW 128 (176)
T ss_dssp ----------------------------------------------------------------CCCCCCSSCEEEEEET
T ss_pred ----------------------------------------------------------------CcccccCCCEEEEEcC
Confidence 0034578999999999
Q ss_pred CCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 413 QDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 413 ~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
+|.++|++.++++.+.++ .+++++ ++||.. .+.++++.+.|.+||++
T Consensus 129 ~D~~~~~~~~~~~~~~~~---~~~~~~------~~~H~~----~~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 129 HDELIPAADVIAWAQARS---ARLLLV------DDGHRL----GAHVQAASRAFAELLQS 175 (176)
T ss_dssp TCSSSCHHHHHHHHHHHT---CEEEEE------SSCTTC----TTCHHHHHHHHHHHHHT
T ss_pred CCCccCHHHHHHHHHhCC---ceEEEe------CCCccc----cccHHHHHHHHHHHHHh
Confidence 999999999999999883 367764 578943 36678999999999975
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-20 Score=183.28 Aligned_cols=226 Identities=13% Similarity=0.056 Sum_probs=135.1
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhh
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKS 173 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (476)
+++|||+||++++...| ..++..|++ ||+|+++|+||+|.|.....
T Consensus 51 ~~~lvllHG~~~~~~~~-----~~l~~~L~~-~~~v~~~D~~G~G~S~~~~~---------------------------- 96 (280)
T 3qmv_A 51 PLRLVCFPYAGGTVSAF-----RGWQERLGD-EVAVVPVQLPGRGLRLRERP---------------------------- 96 (280)
T ss_dssp SEEEEEECCTTCCGGGG-----TTHHHHHCT-TEEEEECCCTTSGGGTTSCC----------------------------
T ss_pred CceEEEECCCCCChHHH-----HHHHHhcCC-CceEEEEeCCCCCCCCCCCC----------------------------
Confidence 37899999999999999 689999987 99999999999999854321
Q ss_pred hHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCC
Q 011833 174 QLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDG 253 (476)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ 253 (476)
.+++++++ +|+.++++.+. + .+
T Consensus 97 ----------------------------------------------------~~~~~~~a-~~~~~~l~~~~---~--~~ 118 (280)
T 3qmv_A 97 ----------------------------------------------------YDTMEPLA-EAVADALEEHR---L--TH 118 (280)
T ss_dssp ----------------------------------------------------CCSHHHHH-HHHHHHHHHTT---C--SS
T ss_pred ----------------------------------------------------CCCHHHHH-HHHHHHHHHhC---C--CC
Confidence 24455555 56655555431 2 24
Q ss_pred cEeEEEEchHHHHHHHHHhcCCCCCCccccc----EEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhh
Q 011833 254 KLLAVGHSMGGILLYAMLSHCGFEGKDSGFA----SVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAI 329 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~----~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (476)
+++++||||||.+++.+|.++| .++. .++++++........... .......+..
T Consensus 119 ~~~lvG~S~Gg~va~~~a~~~p-----~~~~~~~~~l~l~~~~~p~~~~~~~~---------------~~~~~~~~~~-- 176 (280)
T 3qmv_A 119 DYALFGHSMGALLAYEVACVLR-----RRGAPRPRHLFVSGSRAPHLYGDRAD---------------HTLSDTALRE-- 176 (280)
T ss_dssp SEEEEEETHHHHHHHHHHHHHH-----HTTCCCCSCEEEESCCCGGGCSCCCG---------------GGSCHHHHHH--
T ss_pred CEEEEEeCHhHHHHHHHHHHHH-----HcCCCCceEEEEECCCCCCCcCcccc---------------cccCHHHHHH--
Confidence 8999999999999999999887 4444 777766533211110000 0000111111
Q ss_pred ccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEE
Q 011833 330 HPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLAL 409 (476)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii 409 (476)
.+......+. ..+.. ..........+......... +. ...+.++++|+|+|
T Consensus 177 ------------~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~i~~P~l~i 227 (280)
T 3qmv_A 177 ------------VIRDLGGLDD----ADTLG---AAYFDRRLPVLRADLRACER---------YD-WHPRPPLDCPTTAF 227 (280)
T ss_dssp ------------HHHHHTCCC----------------CCTTHHHHHHHHHHHHT---------CC-CCCCCCBCSCEEEE
T ss_pred ------------HHHHhCCCCh----hhhcC---HHHHHHHHHHHHHHHHHHHh---------cc-ccCCCceecCeEEE
Confidence 1111100000 00000 00000011111111111100 00 12367899999999
Q ss_pred eeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHH
Q 011833 410 AADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFL 470 (476)
Q Consensus 410 ~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL 470 (476)
+|++|.++|++.++.+.+.+++. +.++++ .+||+.++ ..+.++++.+.|.+||
T Consensus 228 ~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~------~ggH~~~~-~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 228 SAAADPIATPEMVEAWRPYTTGS-FLRRHL------PGNHFFLN-GGPSRDRLLAHLGTEL 280 (280)
T ss_dssp EEEECSSSCHHHHHTTGGGBSSC-EEEEEE------EEETTGGG-SSHHHHHHHHHHHTTC
T ss_pred EecCCCCcChHHHHHHHHhcCCc-eEEEEe------cCCCeEEc-CchhHHHHHHHHHhhC
Confidence 99999999999999999998864 456665 45996542 2256778888887775
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.83 E-value=9.9e-20 Score=189.72 Aligned_cols=240 Identities=13% Similarity=0.105 Sum_probs=151.3
Q ss_pred eeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccc
Q 011833 71 AVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDS 150 (476)
Q Consensus 71 ~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~ 150 (476)
.+..+|..+.++.+.|.. .++.|+||++||++++...+. ..++..|+++||.|+++|+||+|.|......
T Consensus 172 ~i~~~g~~l~~~~~~P~~--~~~~P~vv~~hG~~~~~~~~~----~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~---- 241 (415)
T 3mve_A 172 EIPFEKGKITAHLHLTNT--DKPHPVVIVSAGLDSLQTDMW----RLFRDHLAKHDIAMLTVDMPSVGYSSKYPLT---- 241 (415)
T ss_dssp EEECSSSEEEEEEEESCS--SSCEEEEEEECCTTSCGGGGH----HHHHHTTGGGTCEEEEECCTTSGGGTTSCCC----
T ss_pred EEEECCEEEEEEEEecCC--CCCCCEEEEECCCCccHHHHH----HHHHHHHHhCCCEEEEECCCCCCCCCCCCCC----
Confidence 334489999999988764 245789999999998854432 3457788889999999999999998643210
Q ss_pred cccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCch
Q 011833 151 MITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFD 230 (476)
Q Consensus 151 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (476)
.+++
T Consensus 242 ----------------------------------------------------------------------------~~~~ 245 (415)
T 3mve_A 242 ----------------------------------------------------------------------------EDYS 245 (415)
T ss_dssp ----------------------------------------------------------------------------SCTT
T ss_pred ----------------------------------------------------------------------------CCHH
Confidence 0111
Q ss_pred hhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcc
Q 011833 231 HYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSD 310 (476)
Q Consensus 231 ~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~ 310 (476)
..+.++++++.+....+.++++++||||||.+++.++..+| .+|+++|+++++....... ....
T Consensus 246 ----~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~-----~~v~~~v~~~~~~~~~~~~--~~~~----- 309 (415)
T 3mve_A 246 ----RLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQ-----EKIKACVILGAPIHDIFAS--PQKL----- 309 (415)
T ss_dssp ----HHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTT-----TTCCEEEEESCCCSHHHHC--HHHH-----
T ss_pred ----HHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCC-----cceeEEEEECCcccccccc--HHHH-----
Confidence 23355677776654333458999999999999999999776 7899999999874311100 0000
Q ss_pred hhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccC
Q 011833 311 PIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRS 390 (476)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (476)
. ..+......+...+.... .... .+...+. .+..
T Consensus 310 --------------------~--~~~~~~~~~~~~~~g~~~-~~~~-------------------~~~~~~~--~~~~-- 343 (415)
T 3mve_A 310 --------------------Q--QMPKMYLDVLASRLGKSV-VDIY-------------------SLSGQMA--AWSL-- 343 (415)
T ss_dssp --------------------T--TSCHHHHHHHHHHTTCSS-BCHH-------------------HHHHHGG--GGCT--
T ss_pred --------------------H--HhHHHHHHHHHHHhCCCc-cCHH-------------------HHHHHHh--hcCc--
Confidence 0 000011111111111110 0111 0100000 0000
Q ss_pred CcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCC-CcccccccccCCccchhHHHHHH
Q 011833 391 GTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPH-YAHYDLVGSRLAAYQVYPCIIEF 469 (476)
Q Consensus 391 g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~f 469 (476)
....... +.++++|+|+++|++|.++|++.++.+.+..++. +++++ ++ .+|. ..+++...+++|
T Consensus 344 ~~~~~~~-~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~--~l~~i-----~g~~~h~-------~~~~~~~~i~~f 408 (415)
T 3mve_A 344 KVQGFLS-SRKTKVPILAMSLEGDPVSPYSDNQMVAFFSTYG--KAKKI-----SSKTITQ-------GYEQSLDLAIKW 408 (415)
T ss_dssp TTTTTTT-SSCBSSCEEEEEETTCSSSCHHHHHHHHHTBTTC--EEEEE-----CCCSHHH-------HHHHHHHHHHHH
T ss_pred ccccccc-cCCCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCc--eEEEe-----cCCCccc-------chHHHHHHHHHH
Confidence 0000000 4688999999999999999999999999987764 67776 55 3441 347889999999
Q ss_pred HHhh
Q 011833 470 LTRH 473 (476)
Q Consensus 470 L~~~ 473 (476)
|+++
T Consensus 409 L~~~ 412 (415)
T 3mve_A 409 LEDE 412 (415)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9876
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-20 Score=173.33 Aligned_cols=203 Identities=17% Similarity=0.182 Sum_probs=138.1
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccch
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQS 171 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 171 (476)
..+|+||++||++++...| ..++..|+++||.|+++|.+|+|.+..... ....|.+.
T Consensus 21 ~~~~~vv~lHG~~~~~~~~-----~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~----------------~~~~w~d~-- 77 (232)
T 1fj2_A 21 KATAAVIFLHGLGDTGHGW-----AEAFAGIRSSHIKYICPHAPVRPVTLNMNV----------------AMPSWFDI-- 77 (232)
T ss_dssp CCSEEEEEECCSSSCHHHH-----HHHHHTTCCTTEEEEECCCCEEEEGGGTTE----------------EEECSSCB--
T ss_pred CCCceEEEEecCCCccchH-----HHHHHHHhcCCcEEEecCCCcccccccccc----------------cccccccc--
Confidence 3578999999999999888 578888888899999997777655422110 00000000
Q ss_pred hhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCC
Q 011833 172 KSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPK 251 (476)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~ 251 (476)
.+. .+ +.+ ...+++++++ +|+.++++++.+ .+.+
T Consensus 78 ---------------~g~-~~----~~~------------------------~~~~~~~~~~-~~~~~~i~~~~~-~~~~ 111 (232)
T 1fj2_A 78 ---------------IGL-SP----DSQ------------------------EDESGIKQAA-ENIKALIDQEVK-NGIP 111 (232)
T ss_dssp ---------------CCC-ST----TCC------------------------BCHHHHHHHH-HHHHHHHHHHHH-TTCC
T ss_pred ---------------ccC-Cc----ccc------------------------cccHHHHHHH-HHHHHHHHHHhc-CCCC
Confidence 000 00 000 0012234444 788888888876 5554
Q ss_pred CCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhcc
Q 011833 252 DGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHP 331 (476)
Q Consensus 252 ~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (476)
.++++++||||||.+++.++.++| .+|+++|++++.......
T Consensus 112 ~~~i~l~G~S~Gg~~a~~~a~~~~-----~~v~~~i~~~~~~~~~~~--------------------------------- 153 (232)
T 1fj2_A 112 SNRIILGGFSQGGALSLYTALTTQ-----QKLAGVTALSCWLPLRAS--------------------------------- 153 (232)
T ss_dssp GGGEEEEEETHHHHHHHHHHTTCS-----SCCSEEEEESCCCTTGGG---------------------------------
T ss_pred cCCEEEEEECHHHHHHHHHHHhCC-----CceeEEEEeecCCCCCcc---------------------------------
Confidence 469999999999999999999887 789999999986431110
Q ss_pred CCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEee
Q 011833 332 FASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAA 411 (476)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G 411 (476)
. + . ....+.++++|+|+++|
T Consensus 154 -~----------------~-----------------~--------------------------~~~~~~~~~~P~l~i~G 173 (232)
T 1fj2_A 154 -F----------------P-----------------Q--------------------------GPIGGANRDISILQCHG 173 (232)
T ss_dssp -S----------------C-----------------S--------------------------SCCCSTTTTCCEEEEEE
T ss_pred -c----------------c-----------------c--------------------------cccccccCCCCEEEEec
Confidence 0 0 0 00135668899999999
Q ss_pred CCCCcCCHHHHHHHHHhcCC----CceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 412 DQDLICPTEAVYETVKLIPE----HLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 412 ~~D~~vp~~~~~~~~~~l~~----~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
++|.++|.+.++++.+.+.. .+++++++ ++++|.. ..+.++.+.+||+++
T Consensus 174 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~H~~-------~~~~~~~i~~~l~~~ 227 (232)
T 1fj2_A 174 DCDPLVPLMFGSLTVEKLKTLVNPANVTFKTY-----EGMMHSS-------CQQEMMDVKQFIDKL 227 (232)
T ss_dssp TTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEE-----TTCCSSC-------CHHHHHHHHHHHHHH
T ss_pred CCCccCCHHHHHHHHHHHHHhCCCCceEEEEe-----CCCCccc-------CHHHHHHHHHHHHHh
Confidence 99999999999988887743 23678877 8999943 244568999999875
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.2e-20 Score=190.18 Aligned_cols=117 Identities=18% Similarity=0.181 Sum_probs=92.5
Q ss_pred EEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcccccccccc
Q 011833 78 RLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANA 157 (476)
Q Consensus 78 ~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~ 157 (476)
.+.++.|.|... ++.|+||++||++++. | ..++..|+++||.|+++|+||+|.+.....
T Consensus 144 ~l~~~l~~P~~~--~~~P~Vv~~hG~~~~~--~-----~~~a~~La~~Gy~V~a~D~rG~g~~~~~~~------------ 202 (422)
T 3k2i_A 144 RVRATLFLPPGP--GPFPGIIDIFGIGGGL--L-----EYRASLLAGHGFATLALAYYNFEDLPNNMD------------ 202 (422)
T ss_dssp TEEEEEEECSSS--CCBCEEEEECCTTCSC--C-----CHHHHHHHTTTCEEEEEECSSSTTSCSSCS------------
T ss_pred cEEEEEEcCCCC--CCcCEEEEEcCCCcch--h-----HHHHHHHHhCCCEEEEEccCCCCCCCCCcc------------
Confidence 577777777643 4578999999997763 3 357889999999999999999998744221
Q ss_pred ccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccH
Q 011833 158 KSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDV 237 (476)
Q Consensus 158 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 237 (476)
.+..+|+
T Consensus 203 -------------------------------------------------------------------------~~~~~d~ 209 (422)
T 3k2i_A 203 -------------------------------------------------------------------------NISLEYF 209 (422)
T ss_dssp -------------------------------------------------------------------------CEETHHH
T ss_pred -------------------------------------------------------------------------cCCHHHH
Confidence 1124688
Q ss_pred HHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 238 PAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 238 ~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
.++++++.++...+.++++++||||||.+++.++.++| . |+++|+++++..
T Consensus 210 ~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p-----~-v~a~V~~~~~~~ 260 (422)
T 3k2i_A 210 EEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLK-----N-VSATVSINGSGI 260 (422)
T ss_dssp HHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCS-----S-EEEEEEESCCSB
T ss_pred HHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCc-----C-ccEEEEEcCccc
Confidence 88999998876655569999999999999999999876 3 999999988764
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.1e-19 Score=171.07 Aligned_cols=67 Identities=7% Similarity=-0.024 Sum_probs=54.9
Q ss_pred cCCCCcccEEEEeeCCCCcCCHHH-HHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 398 HIGKTNVPVLALAADQDLICPTEA-VYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 398 ~l~~i~vPvLii~G~~D~~vp~~~-~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
.+.++++|+|+|+|++|.++|++. .+++++.. +..++++++ +++||..+ .+.++++.+.|.+||+++
T Consensus 160 ~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~-----~g~~H~~~---~~~~~~~~~~i~~fl~~~ 227 (258)
T 2fx5_A 160 SQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRA-NVPVFWGER-----RYVSHFEP---VGSGGAYRGPSTAWFRFQ 227 (258)
T ss_dssp GGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHC-SSCEEEEEE-----SSCCTTSS---TTTCGGGHHHHHHHHHHH
T ss_pred hhccCCCCEEEEEcCCCcccCchhhHHHHHhcc-CCCeEEEEE-----CCCCCccc---cchHHHHHHHHHHHHHHH
Confidence 356689999999999999999986 88888884 345678887 89999554 566789999999999854
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-19 Score=183.73 Aligned_cols=117 Identities=15% Similarity=0.131 Sum_probs=86.3
Q ss_pred eEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEe----cCCCCCCcccccccCccccc
Q 011833 77 WRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWIL----EVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 77 ~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~----D~rG~G~S~~~~~~~~~~~~ 152 (476)
..+.+..+.+.+ ..+|+|||+||++++...|. ....+++.| ++||+|+++ |+||||.|+...
T Consensus 24 ~~~~y~~~g~~~---~~~~~vvllHG~~~~~~~~~--~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~~~~-------- 89 (335)
T 2q0x_A 24 PYCKIPVFMMNM---DARRCVLWVGGQTESLLSFD--YFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQDHAH-------- 89 (335)
T ss_dssp TTEEEEEEEECT---TSSSEEEEECCTTCCTTCST--THHHHHHHH-TTTCEEEEECCGGGBTTSCSCCHHH--------
T ss_pred CceeEEEeccCC---CCCcEEEEECCCCccccchh--HHHHHHHHH-HCCcEEEEEeccCCCCCCCCccccC--------
Confidence 556666565311 23588999999988765541 002466777 679999999 559999984311
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
+
T Consensus 90 -------------------------------------------------------------------------------~ 90 (335)
T 2q0x_A 90 -------------------------------------------------------------------------------D 90 (335)
T ss_dssp -------------------------------------------------------------------------------H
T ss_pred -------------------------------------------------------------------------------c
Confidence 1
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHh--cCCCCCCcccccEEEEeccccc
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLS--HCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~--~~p~~~~~~~v~~lvlla~~~~ 294 (476)
.+|+.++++++.+..+.+ +++++||||||.+++.++. .+| .+|+++|++++...
T Consensus 91 -~~d~~~~~~~l~~~l~~~--~~~LvGhSmGG~iAl~~A~~~~~p-----~rV~~lVL~~~~~~ 146 (335)
T 2q0x_A 91 -AEDVDDLIGILLRDHCMN--EVALFATSTGTQLVFELLENSAHK-----SSITRVILHGVVCD 146 (335)
T ss_dssp -HHHHHHHHHHHHHHSCCC--CEEEEEEGGGHHHHHHHHHHCTTG-----GGEEEEEEEEECCC
T ss_pred -HHHHHHHHHHHHHHcCCC--cEEEEEECHhHHHHHHHHHhccch-----hceeEEEEECCccc
Confidence 368888899888765554 8999999999999999998 456 88999999988643
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-19 Score=163.66 Aligned_cols=170 Identities=18% Similarity=0.252 Sum_probs=123.6
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhCCC---cEEEecCCCCCCcccccccCccccccccccccCCCcccccccc
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGF---DTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQ 170 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy---~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 170 (476)
+|+||++||++++...| ..+++.|.++|| .|+++|+||+|.|...
T Consensus 3 ~~~vv~~HG~~~~~~~~-----~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~~--------------------------- 50 (181)
T 1isp_A 3 HNPVVMVHGIGGASFNF-----AGIKSYLVSQGWSRDKLYAVDFWDKTGTNYN--------------------------- 50 (181)
T ss_dssp CCCEEEECCTTCCGGGG-----HHHHHHHHHTTCCGGGEEECCCSCTTCCHHH---------------------------
T ss_pred CCeEEEECCcCCCHhHH-----HHHHHHHHHcCCCCccEEEEecCCCCCchhh---------------------------
Confidence 68999999999999999 589999999998 7999999999987321
Q ss_pred hhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCC
Q 011833 171 SKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKP 250 (476)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~ 250 (476)
+ .+++.+.++.+.+..+.
T Consensus 51 ---------------------------------------------------------~-----~~~~~~~~~~~~~~~~~ 68 (181)
T 1isp_A 51 ---------------------------------------------------------N-----GPVLSRFVQKVLDETGA 68 (181)
T ss_dssp ---------------------------------------------------------H-----HHHHHHHHHHHHHHHCC
T ss_pred ---------------------------------------------------------h-----HHHHHHHHHHHHHHcCC
Confidence 0 12333333333344443
Q ss_pred CCCcEeEEEEchHHHHHHHHHhcC--CCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHh
Q 011833 251 KDGKLLAVGHSMGGILLYAMLSHC--GFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAA 328 (476)
Q Consensus 251 ~~~ki~lvGhS~GG~ia~~~a~~~--p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (476)
++++++||||||.+++.++.++ | .+|+++|+++++......
T Consensus 69 --~~~~lvG~S~Gg~~a~~~~~~~~~~-----~~v~~~v~~~~~~~~~~~------------------------------ 111 (181)
T 1isp_A 69 --KKVDIVAHSMGGANTLYYIKNLDGG-----NKVANVVTLGGANRLTTG------------------------------ 111 (181)
T ss_dssp --SCEEEEEETHHHHHHHHHHHHSSGG-----GTEEEEEEESCCGGGTCS------------------------------
T ss_pred --CeEEEEEECccHHHHHHHHHhcCCC-----ceEEEEEEEcCccccccc------------------------------
Confidence 4899999999999999999886 5 789999999987531110
Q ss_pred hccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEE
Q 011833 329 IHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLA 408 (476)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLi 408 (476)
. ..+ + .....++|+|+
T Consensus 112 --~------------------------------------~~~--------------------~------~~~~~~~p~l~ 127 (181)
T 1isp_A 112 --K------------------------------------ALP--------------------G------TDPNQKILYTS 127 (181)
T ss_dssp --B------------------------------------CCC--------------------C------SCTTCCCEEEE
T ss_pred --c------------------------------------cCC--------------------C------CCCccCCcEEE
Confidence 0 000 0 00123579999
Q ss_pred EeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 409 LAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 409 i~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
++|++|.++|++.. .+++. +++++ +++||..+ .+.+ ++.+.|.+||++..
T Consensus 128 i~G~~D~~v~~~~~-----~~~~~--~~~~~-----~~~gH~~~---~~~~-~~~~~i~~fl~~~~ 177 (181)
T 1isp_A 128 IYSSADMIVMNYLS-----RLDGA--RNVQI-----HGVGHIGL---LYSS-QVNSLIKEGLNGGG 177 (181)
T ss_dssp EEETTCSSSCHHHH-----CCBTS--EEEEE-----SSCCTGGG---GGCH-HHHHHHHHHHTTTC
T ss_pred EecCCCcccccccc-----cCCCC--cceee-----ccCchHhh---ccCH-HHHHHHHHHHhccC
Confidence 99999999999853 35554 66776 89999654 3444 79999999998753
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=182.00 Aligned_cols=65 Identities=20% Similarity=0.285 Sum_probs=51.7
Q ss_pred CcccEEEEeeCCCCcCCH-----HHHHHHHHhcCC--CceeEEEecCCCCCCCc-----ccccccccCC-ccchhHHHHH
Q 011833 402 TNVPVLALAADQDLICPT-----EAVYETVKLIPE--HLVSFKVFGEPRGPHYA-----HYDLVGSRLA-AYQVYPCIIE 468 (476)
Q Consensus 402 i~vPvLii~G~~D~~vp~-----~~~~~~~~~l~~--~~~~~~v~~~~~~~~~g-----H~~~~~~~~~-~~~v~~~i~~ 468 (476)
+++|+|+++|++|.++|+ +.++++.+.++. .+++++++ +++| |..+ .+. ++++++.|.+
T Consensus 244 ~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~-----~~~gi~G~~H~~~---~~~~~~~~~~~i~~ 315 (328)
T 1qlw_A 244 TSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSL-----PALGVHGNSHMMM---QDRNNLQVADLILD 315 (328)
T ss_dssp TTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEG-----GGGTCCCCCTTGG---GSTTHHHHHHHHHH
T ss_pred cCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEc-----CCCCcCCCcccch---hccCHHHHHHHHHH
Confidence 579999999999999997 888999988863 23577777 6555 9544 344 7899999999
Q ss_pred HHHhhc
Q 011833 469 FLTRHD 474 (476)
Q Consensus 469 fL~~~~ 474 (476)
||+++.
T Consensus 316 fl~~~~ 321 (328)
T 1qlw_A 316 WIGRNT 321 (328)
T ss_dssp HHHHTC
T ss_pred HHHhcc
Confidence 998863
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.8e-19 Score=174.86 Aligned_cols=132 Identities=14% Similarity=0.093 Sum_probs=98.1
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCC---CCcceeecCCCCCHHHHHHhC-CCcEEEecCCCCCCcc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIG---TNAIGYDLSPEYSFARYMSGQ-GFDTWILEVRGAGLSA 141 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~~~L~~~-Gy~V~~~D~rG~G~S~ 141 (476)
+...+. +.+| .+.++.|.|... ...|+||++||++ ++...| ..++..|+++ ||.|+++|+||+|.|.
T Consensus 49 ~~~~i~-~~~g-~i~~~~~~p~~~--~~~p~vv~~HGgg~~~g~~~~~-----~~~~~~la~~~g~~v~~~d~rg~g~~~ 119 (311)
T 2c7b_A 49 RDVHIP-VSGG-SIRARVYFPKKA--AGLPAVLYYHGGGFVFGSIETH-----DHICRRLSRLSDSVVVSVDYRLAPEYK 119 (311)
T ss_dssp EEEEEE-ETTE-EEEEEEEESSSC--SSEEEEEEECCSTTTSCCTGGG-----HHHHHHHHHHHTCEEEEECCCCTTTSC
T ss_pred EEEEec-CCCC-cEEEEEEecCCC--CCCcEEEEECCCcccCCChhhh-----HHHHHHHHHhcCCEEEEecCCCCCCCC
Confidence 334454 4566 888888877643 2458899999988 777778 4788889875 9999999999999874
Q ss_pred cccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhc
Q 011833 142 HRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDL 221 (476)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (476)
.+.
T Consensus 120 ~~~----------------------------------------------------------------------------- 122 (311)
T 2c7b_A 120 FPT----------------------------------------------------------------------------- 122 (311)
T ss_dssp TTH-----------------------------------------------------------------------------
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 321
Q ss_pred ccccCCCchhhhhccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 222 IVKNDWDFDHYLEEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 222 ~~~~~~~~~~~~~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
..+|+.++++++.+.. +.+.++++++||||||.+++.++.++|-.. ...++++|+++|..+.
T Consensus 123 -----------~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~-~~~~~~~vl~~p~~~~ 187 (311)
T 2c7b_A 123 -----------AVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSG-EKLVKKQVLIYPVVNM 187 (311)
T ss_dssp -----------HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTT-CCCCSEEEEESCCCCC
T ss_pred -----------cHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcC-CCCceeEEEECCccCC
Confidence 1367778888886653 333358999999999999999998765111 1369999999998763
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.82 E-value=7e-20 Score=171.22 Aligned_cols=198 Identities=15% Similarity=0.190 Sum_probs=142.9
Q ss_pred CCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEe--cCCCCCCcccccccCcccc
Q 011833 74 NSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWIL--EVRGAGLSAHRVEFGEDSM 151 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~--D~rG~G~S~~~~~~~~~~~ 151 (476)
.+|..+.++. +... ..+|+||++||++++...| ..++..|++ ||.|+++ |+||+|.|.......
T Consensus 22 ~~~~~~~~~~--~~~~--~~~~~vv~~HG~~~~~~~~-----~~~~~~l~~-g~~v~~~~~d~~g~g~s~~~~~~~---- 87 (226)
T 2h1i_A 22 SNAMMKHVFQ--KGKD--TSKPVLLLLHGTGGNELDL-----LPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLA---- 87 (226)
T ss_dssp HHSSSCEEEE--CCSC--TTSCEEEEECCTTCCTTTT-----HHHHHHHHT-TSCEEEECCSEEETTEEESSCEEE----
T ss_pred CCCceeEEec--CCCC--CCCcEEEEEecCCCChhHH-----HHHHHHhcc-CceEEEecCcccCCcchhhccccC----
Confidence 4777776654 3321 3578999999999999888 578888987 9999999 999999874321100
Q ss_pred ccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchh
Q 011833 152 ITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDH 231 (476)
Q Consensus 152 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (476)
...++.++
T Consensus 88 ------------------------------------------------------------------------~~~~~~~~ 95 (226)
T 2h1i_A 88 ------------------------------------------------------------------------EGIFDEED 95 (226)
T ss_dssp ------------------------------------------------------------------------TTEECHHH
T ss_pred ------------------------------------------------------------------------ccCcChhh
Confidence 00112222
Q ss_pred hh--hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCc
Q 011833 232 YL--EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLS 309 (476)
Q Consensus 232 ~~--~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~ 309 (476)
+. .+|+.++++.+.+..+.+..+++++||||||.+++.++..+| .+|+++|++++.......
T Consensus 96 ~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-----~~~~~~v~~~~~~~~~~~----------- 159 (226)
T 2h1i_A 96 LIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYE-----NALKGAVLHHPMVPRRGM----------- 159 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCT-----TSCSEEEEESCCCSCSSC-----------
T ss_pred HHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhCh-----hhhCEEEEeCCCCCcCcc-----------
Confidence 22 245666666667776555569999999999999999999887 689999999886421100
Q ss_pred chhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCcccc
Q 011833 310 DPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDR 389 (476)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (476)
T Consensus 160 -------------------------------------------------------------------------------- 159 (226)
T 2h1i_A 160 -------------------------------------------------------------------------------- 159 (226)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchhHHHH
Q 011833 390 SGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCII 467 (476)
Q Consensus 390 ~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~ 467 (476)
.....+++|+++++|++|.++|.+.++.+.+.+++. .+.+ ++ +++||.. ..+..+.+.
T Consensus 160 -------~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~-----~~~gH~~-------~~~~~~~~~ 219 (226)
T 2h1i_A 160 -------QLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HW-----ENRGHQL-------TMGEVEKAK 219 (226)
T ss_dssp -------CCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EE-----ESSTTSC-------CHHHHHHHH
T ss_pred -------ccccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-Ee-----CCCCCCC-------CHHHHHHHH
Confidence 012235899999999999999999999999998754 3444 66 8999943 256788999
Q ss_pred HHHHhh
Q 011833 468 EFLTRH 473 (476)
Q Consensus 468 ~fL~~~ 473 (476)
+||+++
T Consensus 220 ~~l~~~ 225 (226)
T 2h1i_A 220 EWYDKA 225 (226)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999764
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=168.06 Aligned_cols=194 Identities=12% Similarity=0.162 Sum_probs=133.5
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHh--CCCcEEEecCCCC------CCcccccccCccccccccccccCCCc
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSG--QGFDTWILEVRGA------GLSAHRVEFGEDSMITSANAKSTGGT 163 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~--~Gy~V~~~D~rG~------G~S~~~~~~~~~~~~~~~~~~~~g~~ 163 (476)
..+|+||++||++++...| ..++..|++ +||.|+++|+||. |.+.. .+++ ..|.+
T Consensus 12 ~~~~~vv~~HG~~~~~~~~-----~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~-~w~d-----------~~g~g 74 (218)
T 1auo_A 12 PADACVIWLHGLGADRYDF-----MPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMP-SWYD-----------IKAMS 74 (218)
T ss_dssp CCSEEEEEECCTTCCTTTT-----HHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEE-CSSC-----------EEECS
T ss_pred CCCcEEEEEecCCCChhhH-----HHHHHHHhhcCCceEEEeCCCCCccccCCCCCccc-ceec-----------CcCCC
Confidence 3578999999999999888 588999998 9999999998853 22100 0000 00000
Q ss_pred ccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHH
Q 011833 164 TLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEY 243 (476)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~ 243 (476)
.. .+ . ..++++++. +|+.++++.
T Consensus 75 ~~--------------------------------~~----------~--------------~~~~~~~~~-~~~~~~~~~ 97 (218)
T 1auo_A 75 PA--------------------------------RS----------I--------------SLEELEVSA-KMVTDLIEA 97 (218)
T ss_dssp SS--------------------------------CE----------E--------------CHHHHHHHH-HHHHHHHHH
T ss_pred cc--------------------------------cc----------c--------------chHHHHHHH-HHHHHHHHH
Confidence 00 00 0 001223333 678888887
Q ss_pred HHHHhCCCCCcEeEEEEchHHHHHHHHHh-cCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCCh
Q 011833 244 IRTLSKPKDGKLLAVGHSMGGILLYAMLS-HCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPL 322 (476)
Q Consensus 244 l~~~~~~~~~ki~lvGhS~GG~ia~~~a~-~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (476)
+.+ .+.+.++++++||||||.+++.++. ++| .+|+++|++++......
T Consensus 98 ~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~-----~~~~~~v~~~~~~~~~~------------------------- 146 (218)
T 1auo_A 98 QKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQ-----GPLGGVIALSTYAPTFG------------------------- 146 (218)
T ss_dssp HHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCC-----SCCCEEEEESCCCTTCC-------------------------
T ss_pred HHH-cCCCcccEEEEEECHHHHHHHHHHHhcCC-----CCccEEEEECCCCCCch-------------------------
Confidence 765 4444568999999999999999999 877 78999999998653200
Q ss_pred HHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCC
Q 011833 323 GTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKT 402 (476)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i 402 (476)
+ +... ...++
T Consensus 147 ----------~----------------~~~~--------------------------------------------~~~~~ 156 (218)
T 1auo_A 147 ----------D----------------ELEL--------------------------------------------SASQQ 156 (218)
T ss_dssp ----------T----------------TCCC--------------------------------------------CHHHH
T ss_pred ----------h----------------hhhh--------------------------------------------hhccc
Confidence 0 0000 01246
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
++|+|+++|++|.++|++.++++.+.+++. .++++++ + .||... .+..+.+.+||+++
T Consensus 157 ~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~-----~-~gH~~~-------~~~~~~~~~~l~~~ 216 (218)
T 1auo_A 157 RIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEY-----P-MGHEVL-------PQEIHDIGAWLAAR 216 (218)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEE-----S-CSSSCC-------HHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEe-----c-CCCccC-------HHHHHHHHHHHHHH
Confidence 899999999999999999999999998763 3677777 8 999432 34567888888764
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.7e-19 Score=163.40 Aligned_cols=62 Identities=11% Similarity=0.137 Sum_probs=49.2
Q ss_pred CCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 401 KTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 401 ~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
++.+|+++++|++|.++|++.++++.+.+ +. ++.++ +++||... .+.++. +..+++||++..
T Consensus 125 ~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~~--~~~~~-----~~~gH~~~---~~~p~~-~~~~~~fl~~~~ 186 (194)
T 2qs9_A 125 ANCPYIVQFGSTDDPFLPWKEQQEVADRL-ET--KLHKF-----TDCGHFQN---TEFHEL-ITVVKSLLKVPA 186 (194)
T ss_dssp HHCSEEEEEEETTCSSSCHHHHHHHHHHH-TC--EEEEE-----SSCTTSCS---SCCHHH-HHHHHHHHTCCC
T ss_pred hhCCCEEEEEeCCCCcCCHHHHHHHHHhc-CC--eEEEe-----CCCCCccc---hhCHHH-HHHHHHHHHhhh
Confidence 35679999999999999999999999998 44 67777 89999543 565554 456679998764
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.8e-19 Score=167.65 Aligned_cols=199 Identities=13% Similarity=0.151 Sum_probs=135.7
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHh--CCCcEEEecCCCCCCcccccccCccccccccccccCCCccccccc
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSG--QGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRES 169 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~--~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 169 (476)
.++|+||++||++++...| ..+++.|++ +||.|+++|+||++.+..... ....|.+.
T Consensus 22 ~~~~~vv~lHG~~~~~~~~-----~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~----------------~~~~w~d~ 80 (226)
T 3cn9_A 22 NADACIIWLHGLGADRTDF-----KPVAEALQMVLPSTRFILPQAPSQAVTVNGGW----------------VMPSWYDI 80 (226)
T ss_dssp TCCEEEEEECCTTCCGGGG-----HHHHHHHHHHCTTEEEEECCCCEEECGGGTSC----------------EEECSSCB
T ss_pred CCCCEEEEEecCCCChHHH-----HHHHHHHhhcCCCcEEEeecCCCCccccCCCC----------------cccccccc
Confidence 4578999999999999888 588999998 999999999997765422110 00000000
Q ss_pred chhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhC
Q 011833 170 QSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSK 249 (476)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~ 249 (476)
. |.+...+ ...+++++++ +|+.++++.+.+ .+
T Consensus 81 ~----------------------g~g~~~~------------------------~~~~~~~~~~-~~~~~~~~~~~~-~~ 112 (226)
T 3cn9_A 81 L----------------------AFSPARA------------------------IDEDQLNASA-DQVIALIDEQRA-KG 112 (226)
T ss_dssp C----------------------CSSSTTC------------------------BCHHHHHHHH-HHHHHHHHHHHH-TT
T ss_pred c----------------------ccccccc------------------------ccchhHHHHH-HHHHHHHHHHHH-cC
Confidence 0 0000000 0011223333 677777777655 34
Q ss_pred CCCCcEeEEEEchHHHHHHHHHh-cCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHh
Q 011833 250 PKDGKLLAVGHSMGGILLYAMLS-HCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAA 328 (476)
Q Consensus 250 ~~~~ki~lvGhS~GG~ia~~~a~-~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (476)
.+..+++++||||||.+++.++. ++| .+|+++|++++.......
T Consensus 113 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~-----~~~~~~v~~~~~~~~~~~------------------------------ 157 (226)
T 3cn9_A 113 IAAERIILAGFSQGGAVVLHTAFRRYA-----QPLGGVLALSTYAPTFDD------------------------------ 157 (226)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTCS-----SCCSEEEEESCCCGGGGG------------------------------
T ss_pred CCcccEEEEEECHHHHHHHHHHHhcCc-----cCcceEEEecCcCCCchh------------------------------
Confidence 44468999999999999999999 877 789999999886431100
Q ss_pred hccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEE
Q 011833 329 IHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLA 408 (476)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLi 408 (476)
+ .+ ...++++|+|+
T Consensus 158 -------------~---------~~--------------------------------------------~~~~~~~P~li 171 (226)
T 3cn9_A 158 -------------L---------AL--------------------------------------------DERHKRIPVLH 171 (226)
T ss_dssp -------------C---------CC--------------------------------------------CTGGGGCCEEE
T ss_pred -------------h---------hh--------------------------------------------cccccCCCEEE
Confidence 0 00 01346899999
Q ss_pred EeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 409 LAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 409 i~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
++|++|.++|++.++++.+.++.. .++++++ + +||... .+..+.+.+||+++
T Consensus 172 i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~-----~-~gH~~~-------~~~~~~i~~~l~~~ 225 (226)
T 3cn9_A 172 LHGSQDDVVDPALGRAAHDALQAQGVEVGWHDY-----P-MGHEVS-------LEEIHDIGAWLRKR 225 (226)
T ss_dssp EEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEE-----S-CCSSCC-------HHHHHHHHHHHHHH
T ss_pred EecCCCCccCHHHHHHHHHHHHHcCCceeEEEe-----c-CCCCcc-------hhhHHHHHHHHHhh
Confidence 999999999999999999988753 3677777 8 999432 44578899999864
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.7e-19 Score=165.53 Aligned_cols=123 Identities=12% Similarity=0.083 Sum_probs=94.1
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhh
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQA 314 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~ 314 (476)
+++.++++.+.+..+.+.++++++||||||.+++.++.++| .+++++|++++.......
T Consensus 84 ~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~-----~~~~~~v~~~~~~~~~~~---------------- 142 (209)
T 3og9_A 84 DWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGK-----INFDKIIAFHGMQLEDFE---------------- 142 (209)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTS-----CCCSEEEEESCCCCCCCC----------------
T ss_pred HHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCC-----cccceEEEECCCCCCccc----------------
Confidence 67777788777777765569999999999999999999987 789999998875321100
Q ss_pred ccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCccc
Q 011833 315 LNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFF 394 (476)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 394 (476)
T Consensus 143 -------------------------------------------------------------------------------- 142 (209)
T 3og9_A 143 -------------------------------------------------------------------------------- 142 (209)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCc--eeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 395 YKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHL--VSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 395 ~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
......++|+|+++|++|.++|.+.++++.+.+.... ++++++ + .||.- ..+..+.+.+||++
T Consensus 143 --~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~-----~-~gH~~-------~~~~~~~~~~~l~~ 207 (209)
T 3og9_A 143 --QTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYES-----S-LGHQL-------TQEEVLAAKKWLTE 207 (209)
T ss_dssp --CCCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEEC-----S-STTSC-------CHHHHHHHHHHHHH
T ss_pred --ccccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEc-----C-CCCcC-------CHHHHHHHHHHHHh
Confidence 0123467899999999999999999999998886543 455554 4 78921 25568899999987
Q ss_pred h
Q 011833 473 H 473 (476)
Q Consensus 473 ~ 473 (476)
+
T Consensus 208 ~ 208 (209)
T 3og9_A 208 T 208 (209)
T ss_dssp H
T ss_pred h
Confidence 5
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=6e-19 Score=185.21 Aligned_cols=118 Identities=19% Similarity=0.207 Sum_probs=92.6
Q ss_pred EEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcccccccccc
Q 011833 78 RLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANA 157 (476)
Q Consensus 78 ~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~ 157 (476)
.+.++.|.|... ++.|+||++||++.+.. ...+..|+++||.|+++|+||+|.+.....
T Consensus 160 ~l~~~l~~P~~~--~~~P~Vv~lhG~~~~~~-------~~~a~~La~~Gy~Vla~D~rG~~~~~~~~~------------ 218 (446)
T 3hlk_A 160 RVRGTLFLPPEP--GPFPGIVDMFGTGGGLL-------EYRASLLAGKGFAVMALAYYNYEDLPKTME------------ 218 (446)
T ss_dssp TEEEEEEECSSS--CCBCEEEEECCSSCSCC-------CHHHHHHHTTTCEEEEECCSSSTTSCSCCS------------
T ss_pred eEEEEEEeCCCC--CCCCEEEEECCCCcchh-------hHHHHHHHhCCCEEEEeccCCCCCCCcchh------------
Confidence 577777777543 45789999999987643 346889999999999999999988743211
Q ss_pred ccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccH
Q 011833 158 KSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDV 237 (476)
Q Consensus 158 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 237 (476)
....+|+
T Consensus 219 -------------------------------------------------------------------------~~~~~d~ 225 (446)
T 3hlk_A 219 -------------------------------------------------------------------------TLHLEYF 225 (446)
T ss_dssp -------------------------------------------------------------------------EEEHHHH
T ss_pred -------------------------------------------------------------------------hCCHHHH
Confidence 0113688
Q ss_pred HHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 238 PAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 238 ~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
.++++++.++.+.+.++++++||||||.+++.++.++| . |+++|++++....
T Consensus 226 ~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p-----~-v~a~V~~~~~~~~ 277 (446)
T 3hlk_A 226 EEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLK-----G-ITAAVVINGSVAN 277 (446)
T ss_dssp HHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCS-----C-EEEEEEESCCSBC
T ss_pred HHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCC-----C-ceEEEEEcCcccc
Confidence 88999998887665569999999999999999999976 3 9999999886543
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=6.5e-19 Score=177.87 Aligned_cols=242 Identities=14% Similarity=0.039 Sum_probs=143.9
Q ss_pred ceEEEEEEEcCCCC---------------CCCCCCcEEEecCCCC---Ccce--eecCCCCCHHHHHH-hCCCcEEEecC
Q 011833 76 DWRLALWRYLPSPA---------------APQRNHPLLLLSGIGT---NAIG--YDLSPEYSFARYMS-GQGFDTWILEV 134 (476)
Q Consensus 76 G~~L~~~~~~p~~~---------------~~~~~~~VlllHG~~~---~~~~--~~~~~~~~l~~~L~-~~Gy~V~~~D~ 134 (476)
+..+.++.|.|... ..++.|+||++||.+. +... | ..++..|+ +.||.|+++|+
T Consensus 80 ~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~-----~~~~~~la~~~g~~vv~~d~ 154 (351)
T 2zsh_A 80 RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIY-----DTLCRRLVGLCKCVVVSVNY 154 (351)
T ss_dssp TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHH-----HHHHHHHHHHHTSEEEEECC
T ss_pred CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhH-----HHHHHHHHHHcCCEEEEecC
Confidence 44566666766543 1245689999999543 3222 5 46788888 78999999999
Q ss_pred CCCCCcccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhH
Q 011833 135 RGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLED 214 (476)
Q Consensus 135 rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (476)
||++.+....
T Consensus 155 rg~~~~~~~~---------------------------------------------------------------------- 164 (351)
T 2zsh_A 155 RRAPENPYPC---------------------------------------------------------------------- 164 (351)
T ss_dssp CCTTTSCTTH----------------------------------------------------------------------
T ss_pred CCCCCCCCch----------------------------------------------------------------------
Confidence 9987642211
Q ss_pred HHhhhhcccccCCCchhhhhccHHHHHHHHHHHh----CCCCC-cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEe
Q 011833 215 FQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLS----KPKDG-KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTL 289 (476)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~----~~~~~-ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvll 289 (476)
..+|+.++++++.+.. +.+.+ +++++||||||.+++.++.++|-. ..+|+++|++
T Consensus 165 ------------------~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~--~~~v~~~vl~ 224 (351)
T 2zsh_A 165 ------------------AYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGES--GIDVLGNILL 224 (351)
T ss_dssp ------------------HHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTT--TCCCCEEEEE
T ss_pred ------------------hHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhcc--CCCeeEEEEE
Confidence 1368888999998753 34456 899999999999999999887610 1279999999
Q ss_pred cccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCC
Q 011833 290 ASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNI 369 (476)
Q Consensus 290 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (476)
+|..+............ ....+. ..........+.......+ .
T Consensus 225 ~p~~~~~~~~~~~~~~~----------------------~~~~~~-~~~~~~~~~~~~~~~~~~~--------------~ 267 (351)
T 2zsh_A 225 NPMFGGNERTESEKSLD----------------------GKYFVT-VRDRDWYWKAFLPEGEDRE--------------H 267 (351)
T ss_dssp SCCCCCSSCCHHHHHHT----------------------TTSSCC-HHHHHHHHHHHSCTTCCTT--------------S
T ss_pred CCccCCCcCChhhhhcC----------------------CCcccC-HHHHHHHHHHhCCCCCCCC--------------C
Confidence 98765432210000000 000000 0000000000000000000 0
Q ss_pred CHHHHHHHHHHHHhCCccccCCcccccccCCCCcc-cEEEEeeCCCCcCCHHHHHHHHHhcCC--CceeEEEecCCCCCC
Q 011833 370 PTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNV-PVLALAADQDLICPTEAVYETVKLIPE--HLVSFKVFGEPRGPH 446 (476)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~v-PvLii~G~~D~~vp~~~~~~~~~~l~~--~~~~~~v~~~~~~~~ 446 (476)
.... ........+.++++ |+|+++|++|.+++ ....+.+.+.. ..++++++ ++
T Consensus 268 ---------------~~~~--~~~~~~~~l~~i~~pP~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~-----~g 323 (351)
T 2zsh_A 268 ---------------PACN--PFSPRGKSLEGVSFPKSLVVVAGLDLIRD--WQLAYAEGLKKAGQEVKLMHL-----EK 323 (351)
T ss_dssp ---------------TTTC--TTSTTSCCCTTCCCCEEEEEEETTSTTHH--HHHHHHHHHHHTTCCEEEEEE-----TT
T ss_pred ---------------cccC--CCCCCccchhhCCCCCEEEEEcCCCcchH--HHHHHHHHHHHcCCCEEEEEE-----CC
Confidence 0000 00011235667777 99999999999986 34445555432 24677777 89
Q ss_pred Cccccccc-ccCCccchhHHHHHHHHhh
Q 011833 447 YAHYDLVG-SRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 447 ~gH~~~~~-~~~~~~~v~~~i~~fL~~~ 473 (476)
+||..+.. ..+.++++++.|.+||+++
T Consensus 324 ~gH~~~~~~~~~~~~~~~~~i~~Fl~~~ 351 (351)
T 2zsh_A 324 ATVGFYLLPNNNHFHNVMDEISAFVNAE 351 (351)
T ss_dssp CCTTTTSSSCSHHHHHHHHHHHHHHHC-
T ss_pred CcEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 99954321 1256788999999999864
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.80 E-value=4.6e-19 Score=196.43 Aligned_cols=236 Identities=12% Similarity=0.117 Sum_probs=160.1
Q ss_pred CCCceEEEEEEEcCCCC-CCCCCCcEEEecCCCCCc---ceeecCCCCCHHHHHH-hCCCcEEEecCCCCCCcccccccC
Q 011833 73 PNSDWRLALWRYLPSPA-APQRNHPLLLLSGIGTNA---IGYDLSPEYSFARYMS-GQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~-~~~~~~~VlllHG~~~~~---~~~~~~~~~~l~~~L~-~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
+.||..+.++.+.|... ..++.|+||++||.+.+. ..|. ..+...|+ ++||.|+++|+||+|.+......
T Consensus 480 ~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~----~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~- 554 (740)
T 4a5s_A 480 ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFR----LNWATYLASTENIIVASFDGRGSGYQGDKIMH- 554 (740)
T ss_dssp EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCC----CSHHHHHHHTTCCEEEEECCTTCSSSCHHHHG-
T ss_pred ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccC----cCHHHHHHhcCCeEEEEEcCCCCCcCChhHHH-
Confidence 56999999999988763 234568899999997763 3342 35667777 58999999999999976432110
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
.. .-
T Consensus 555 --------------------------------------------------------------~~--------------~~ 558 (740)
T 4a5s_A 555 --------------------------------------------------------------AI--------------NR 558 (740)
T ss_dssp --------------------------------------------------------------GG--------------TT
T ss_pred --------------------------------------------------------------HH--------------Hh
Confidence 00 00
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLP 307 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~ 307 (476)
.+.....+|+.++++++.+....+.++++++||||||.+++.++.++| ..++++|+++|..++.....
T Consensus 559 ~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p-----~~~~~~v~~~p~~~~~~~~~------- 626 (740)
T 4a5s_A 559 RLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGS-----GVFKCGIAVAPVSRWEYYDS------- 626 (740)
T ss_dssp CTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTC-----SCCSEEEEESCCCCGGGSBH-------
T ss_pred hhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCC-----CceeEEEEcCCccchHHhhh-------
Confidence 111223479999999998654334468999999999999999999887 78999999998865432100
Q ss_pred CcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCC-CCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCc
Q 011833 308 LSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPD-MMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGL 386 (476)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (476)
.+...++..+. ..+++.+..
T Consensus 627 ---------------------------------~~~~~~~~~p~~~~~~~~~~~-------------------------- 647 (740)
T 4a5s_A 627 ---------------------------------VYTERYMGLPTPEDNLDHYRN-------------------------- 647 (740)
T ss_dssp ---------------------------------HHHHHHHCCSSTTTTHHHHHH--------------------------
T ss_pred ---------------------------------HHHHHHcCCCCccccHHHHHh--------------------------
Confidence 00011111110 011111110
Q ss_pred cccCCcccccccCCCCcc-cEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchh
Q 011833 387 CDRSGTFFYKDHIGKTNV-PVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVY 463 (476)
Q Consensus 387 ~~~~g~~~~~~~l~~i~v-PvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~ 463 (476)
......+.++++ |+|++||++|.++|++.+.++++.+... .++++++ |+.+|.- ...+.+..++
T Consensus 648 ------~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~-----~~~~H~~--~~~~~~~~~~ 714 (740)
T 4a5s_A 648 ------STVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY-----TDEDHGI--ASSTAHQHIY 714 (740)
T ss_dssp ------SCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEE-----TTCCTTC--CSHHHHHHHH
T ss_pred ------CCHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEEEEE-----CCCCCcC--CCCccHHHHH
Confidence 001124667776 9999999999999999999999988543 3466776 8999943 1345678899
Q ss_pred HHHHHHHHhh
Q 011833 464 PCIIEFLTRH 473 (476)
Q Consensus 464 ~~i~~fL~~~ 473 (476)
+.+.+||+++
T Consensus 715 ~~i~~fl~~~ 724 (740)
T 4a5s_A 715 THMSHFIKQC 724 (740)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999876
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.5e-19 Score=193.05 Aligned_cols=233 Identities=13% Similarity=0.143 Sum_probs=157.3
Q ss_pred CceEEEEEEEcCCCCC-CCCCCcEEEecCCCCCcc---eeecCCCCCHHHHHH-hCCCcEEEecCCCCCCcccccccCcc
Q 011833 75 SDWRLALWRYLPSPAA-PQRNHPLLLLSGIGTNAI---GYDLSPEYSFARYMS-GQGFDTWILEVRGAGLSAHRVEFGED 149 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~-~~~~~~VlllHG~~~~~~---~~~~~~~~~l~~~L~-~~Gy~V~~~D~rG~G~S~~~~~~~~~ 149 (476)
++..+.++.+.|.... .++.|+||++||++.+.. .|. ..+...|+ ++||.|+++|+||+|.|......
T Consensus 476 ~~~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~----~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~--- 548 (719)
T 1z68_A 476 DEITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFA----VNWISYLASKEGMVIALVDGRGTAFQGDKLLY--- 548 (719)
T ss_dssp TTEEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCC----CCHHHHHHHTTCCEEEEEECTTBSSSCHHHHG---
T ss_pred CCeEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccch----hhHHHHHHhcCCeEEEEEcCCCCCCCchhhHH---
Confidence 4489999999886532 234578999999987653 342 25677775 78999999999999987532110
Q ss_pred ccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCc
Q 011833 150 SMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDF 229 (476)
Q Consensus 150 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (476)
.. .-.+
T Consensus 549 ------------------------------------------------------------~~--------------~~~~ 554 (719)
T 1z68_A 549 ------------------------------------------------------------AV--------------YRKL 554 (719)
T ss_dssp ------------------------------------------------------------GG--------------TTCT
T ss_pred ------------------------------------------------------------HH--------------hhcc
Confidence 00 0011
Q ss_pred hhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCc
Q 011833 230 DHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLS 309 (476)
Q Consensus 230 ~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~ 309 (476)
.....+|+.++++++.++...+.++++++||||||.+++.++.++| .+++++|++++..++.....
T Consensus 555 ~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p-----~~~~~~v~~~~~~~~~~~~~--------- 620 (719)
T 1z68_A 555 GVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGT-----GLFKCGIAVAPVSSWEYYAS--------- 620 (719)
T ss_dssp THHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSS-----SCCSEEEEESCCCCTTTSBH---------
T ss_pred CcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCC-----CceEEEEEcCCccChHHhcc---------
Confidence 2223479999999998854333458999999999999999999987 78999999998765332100
Q ss_pred chhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCC-CCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccc
Q 011833 310 DPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDM-MHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCD 388 (476)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (476)
.+....+..+.. ...+.+..
T Consensus 621 -------------------------------~~~~~~~g~~~~~~~~~~~~~---------------------------- 641 (719)
T 1z68_A 621 -------------------------------VYTERFMGLPTKDDNLEHYKN---------------------------- 641 (719)
T ss_dssp -------------------------------HHHHHHHCCSSTTTTHHHHHH----------------------------
T ss_pred -------------------------------ccchhhcCCcccccchhhhhh----------------------------
Confidence 000001111100 00111100
Q ss_pred cCCcccccccCCCCcc-cEEEEeeCCCCcCCHHHHHHHHHhcCCCc--eeEEEecCCCCCCCcccccccccCCccchhHH
Q 011833 389 RSGTFFYKDHIGKTNV-PVLALAADQDLICPTEAVYETVKLIPEHL--VSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPC 465 (476)
Q Consensus 389 ~~g~~~~~~~l~~i~v-PvLii~G~~D~~vp~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~ 465 (476)
......+.++++ |+|+++|++|.++|++.++++++.+++.. ++++++ |++||.. ..+.++.+++.
T Consensus 642 ----~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~-----~~~gH~~---~~~~~~~~~~~ 709 (719)
T 1z68_A 642 ----STVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWY-----SDQNHGL---SGLSTNHLYTH 709 (719)
T ss_dssp ----TCSGGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEE-----TTCCTTC---CTHHHHHHHHH
T ss_pred ----CCHhHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEE-----CcCCCCC---CcccHHHHHHH
Confidence 001124667887 89999999999999999999999886543 457776 8999943 34557889999
Q ss_pred HHHHHHhh
Q 011833 466 IIEFLTRH 473 (476)
Q Consensus 466 i~~fL~~~ 473 (476)
|++||+++
T Consensus 710 i~~fl~~~ 717 (719)
T 1z68_A 710 MTHFLKQC 717 (719)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999875
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.79 E-value=6.9e-19 Score=173.85 Aligned_cols=133 Identities=14% Similarity=0.098 Sum_probs=99.6
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecC---CCCCcceeecCCCCCHHHHHHhC-CCcEEEecCCCCCCccc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSG---IGTNAIGYDLSPEYSFARYMSGQ-GFDTWILEVRGAGLSAH 142 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG---~~~~~~~~~~~~~~~l~~~L~~~-Gy~V~~~D~rG~G~S~~ 142 (476)
...+. ..+| .+.++.|.|... .++.|+||++|| ++++...| ..+++.|+++ ||.|+++|+||+|.+..
T Consensus 50 ~~~i~-~~~g-~l~~~~~~P~~~-~~~~p~vv~~HGGg~~~g~~~~~-----~~~~~~la~~~g~~v~~~d~rg~~~~~~ 121 (310)
T 2hm7_A 50 EFDMD-LPGR-TLKVRMYRPEGV-EPPYPALVYYHGGSWVVGDLETH-----DPVCRVLAKDGRAVVFSVDYRLAPEHKF 121 (310)
T ss_dssp EEEEE-ETTE-EEEEEEEECTTC-CSSEEEEEEECCSTTTSCCTTTT-----HHHHHHHHHHHTSEEEEECCCCTTTSCT
T ss_pred EEEec-cCCC-eEEEEEEecCCC-CCCCCEEEEECCCccccCChhHh-----HHHHHHHHHhcCCEEEEeCCCCCCCCCC
Confidence 34444 3556 899999988652 245689999999 77777777 4788899875 99999999999987632
Q ss_pred ccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLI 222 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (476)
+.
T Consensus 122 ~~------------------------------------------------------------------------------ 123 (310)
T 2hm7_A 122 PA------------------------------------------------------------------------------ 123 (310)
T ss_dssp TH------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 11
Q ss_pred cccCCCchhhhhccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 223 VKNDWDFDHYLEEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 223 ~~~~~~~~~~~~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
..+|+.++++++.+.. +.+.++++++||||||.+++.++.++|-. ...+|+++|+++|..+..
T Consensus 124 ----------~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~-~~~~v~~~vl~~p~~~~~ 189 (310)
T 2hm7_A 124 ----------AVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKER-GGPALAFQLLIYPSTGYD 189 (310)
T ss_dssp ----------HHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHT-TCCCCCCEEEESCCCCCC
T ss_pred ----------cHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhc-CCCCceEEEEEcCCcCCC
Confidence 1368888899987764 23335899999999999999999876611 113799999999987654
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.3e-18 Score=170.79 Aligned_cols=245 Identities=16% Similarity=0.100 Sum_probs=152.1
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCC---CCcceeecCCCCCHHHHHHh-CCCcEEEecCCCCCCcc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIG---TNAIGYDLSPEYSFARYMSG-QGFDTWILEVRGAGLSA 141 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~~~L~~-~Gy~V~~~D~rG~G~S~ 141 (476)
+...+. +.|| .+.++.|.|... ..|+||++||.+ ++...| ..+.+.|++ .||.|+++|+|+.+...
T Consensus 64 ~~~~~~-~~~g-~i~~~~~~p~~~---~~p~vv~~HGgg~~~g~~~~~-----~~~~~~la~~~g~~V~~~dyr~~p~~~ 133 (326)
T 3ga7_A 64 RTCAVP-TPYG-DVTTRLYSPQPT---SQATLYYLHGGGFILGNLDTH-----DRIMRLLARYTGCTVIGIDYSLSPQAR 133 (326)
T ss_dssp EEEEEC-CTTS-CEEEEEEESSSS---CSCEEEEECCSTTTSCCTTTT-----HHHHHHHHHHHCSEEEEECCCCTTTSC
T ss_pred EEEEee-cCCC-CeEEEEEeCCCC---CCcEEEEECCCCcccCChhhh-----HHHHHHHHHHcCCEEEEeeCCCCCCCC
Confidence 344454 4677 899999988643 348999999988 777677 468888887 79999999999876542
Q ss_pred cccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhc
Q 011833 142 HRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDL 221 (476)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (476)
.
T Consensus 134 ~------------------------------------------------------------------------------- 134 (326)
T 3ga7_A 134 Y------------------------------------------------------------------------------- 134 (326)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred ccccCCCchhhhhccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCC-CCCCcccccEEEEecccccccC
Q 011833 222 IVKNDWDFDHYLEEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCG-FEGKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 222 ~~~~~~~~~~~~~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p-~~~~~~~v~~lvlla~~~~~~~ 297 (476)
... .+|+.++++++.++. +.+.++++++|||+||.+++.++.+++ .......+++++++++..+...
T Consensus 135 --------~~~-~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~ 205 (326)
T 3ga7_A 135 --------PQA-IEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQD 205 (326)
T ss_dssp --------THH-HHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSC
T ss_pred --------CcH-HHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCC
Confidence 111 378899999998764 444569999999999999999998765 0000124889999888765443
Q ss_pred ChhhHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHH
Q 011833 298 SNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQL 377 (476)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (476)
..+.. .. .. .......+.+.. +
T Consensus 206 ~~~~~-~~-------------------------~~----------------~~~~l~~~~~~~----------------~ 227 (326)
T 3ga7_A 206 SVSRR-LF-------------------------GG----------------AWDGLTREDLDM----------------Y 227 (326)
T ss_dssp CHHHH-HC-------------------------CC----------------TTTTCCHHHHHH----------------H
T ss_pred ChhHh-hh-------------------------cC----------------CCCCCCHHHHHH----------------H
Confidence 21000 00 00 000011111111 1
Q ss_pred HHHHHhCCccccCCc-ccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCccccccc
Q 011833 378 TTVFQEGGLCDRSGT-FFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVG 454 (476)
Q Consensus 378 ~~~~~~~~~~~~~g~-~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~ 454 (476)
...+........+.. ......+.+...|+|+++|++|.+++ ....+++.+... .++++++ ++.+|.-...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~-----~g~~H~f~~~ 300 (326)
T 3ga7_A 228 EKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLID--DSRLLHQTLQAHQQPCEYKMY-----PGTLHAFLHY 300 (326)
T ss_dssp HHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEE-----TTCCTTGGGG
T ss_pred HHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCHH--HHHHHHHHHHHCCCcEEEEEe-----CCCccchhhh
Confidence 111110000000000 00112444566799999999999984 556666665433 4678887 8999943222
Q ss_pred c--cCCccchhHHHHHHHHhh
Q 011833 455 S--RLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 455 ~--~~~~~~v~~~i~~fL~~~ 473 (476)
. .+..+++++.+.+||+++
T Consensus 301 ~~~~~~~~~~~~~~~~fl~~~ 321 (326)
T 3ga7_A 301 SRMMTIADDALQDGARFFMAR 321 (326)
T ss_dssp TTTCHHHHHHHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHHHHHH
Confidence 1 233478999999999876
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=158.64 Aligned_cols=66 Identities=15% Similarity=0.181 Sum_probs=48.5
Q ss_pred CCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 399 IGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 399 l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
+.++++|+|+++|++|.++|++.++++.+.+ +. +++++ +++||.......+...++.+.+.+||++
T Consensus 124 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~--~~~~~-----~~~gH~~~~~~~~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 124 IIESAKHRAVIASKDDQIVPFSFSKDLAQQI-DA--ALYEV-----QHGGHFLEDEGFTSLPIVYDVLTSYFSK 189 (192)
T ss_dssp HHHHEEEEEEEEETTCSSSCHHHHHHHHHHT-TC--EEEEE-----TTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred HHhhcCCEEEEecCCCCcCCHHHHHHHHHhc-Cc--eEEEe-----CCCcCcccccccccHHHHHHHHHHHHHH
Confidence 4557889999999999999999999999998 44 67777 8999965532222223346666666654
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-18 Score=172.04 Aligned_cols=135 Identities=20% Similarity=0.084 Sum_probs=98.3
Q ss_pred eeeEeeCCCce-EEEEEEEcCCCCCCCCCCcEEEecCCC---CCcceeecCCCCCHHHHHHh-CCCcEEEecCCCCCCcc
Q 011833 67 LHYVAVPNSDW-RLALWRYLPSPAAPQRNHPLLLLSGIG---TNAIGYDLSPEYSFARYMSG-QGFDTWILEVRGAGLSA 141 (476)
Q Consensus 67 ~~~v~~~~dG~-~L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~~~L~~-~Gy~V~~~D~rG~G~S~ 141 (476)
...+. ..||. .+.++.|.|... .+..|+||++||++ ++...| ..+...|++ .||.|+++|+||+|.|.
T Consensus 53 ~~~i~-~~~g~~~l~~~~~~P~~~-~~~~p~vv~~HGgg~~~g~~~~~-----~~~~~~la~~~G~~Vv~~d~rg~~~~~ 125 (323)
T 1lzl_A 53 ELSAP-GLDGDPEVKIRFVTPDNT-AGPVPVLLWIHGGGFAIGTAESS-----DPFCVEVARELGFAVANVEYRLAPETT 125 (323)
T ss_dssp EEEEC-CSTTCCCEEEEEEEESSC-CSCEEEEEEECCSTTTSCCGGGG-----HHHHHHHHHHHCCEEEEECCCCTTTSC
T ss_pred EEEec-CCCCCceeEEEEEecCCC-CCCCcEEEEECCCccccCChhhh-----HHHHHHHHHhcCcEEEEecCCCCCCCC
Confidence 33444 45675 788888877542 34568999999987 676667 467888887 59999999999999874
Q ss_pred cccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhc
Q 011833 142 HRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDL 221 (476)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (476)
.+.
T Consensus 126 ~~~----------------------------------------------------------------------------- 128 (323)
T 1lzl_A 126 FPG----------------------------------------------------------------------------- 128 (323)
T ss_dssp TTH-----------------------------------------------------------------------------
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 321
Q ss_pred ccccCCCchhhhhccHHHHHHHHHHH---hCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC
Q 011833 222 IVKNDWDFDHYLEEDVPAVMEYIRTL---SKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 222 ~~~~~~~~~~~~~~Dl~a~i~~l~~~---~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~ 297 (476)
..+|+.++++++.+. .+.+.++++++||||||.+++.++.+++-.+ ...++++++++|..+...
T Consensus 129 -----------~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~-~~~~~~~vl~~p~~~~~~ 195 (323)
T 1lzl_A 129 -----------PVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEG-VVPVAFQFLEIPELDDRL 195 (323)
T ss_dssp -----------HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHC-SSCCCEEEEESCCCCTTC
T ss_pred -----------hHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcC-CCCeeEEEEECCccCCCc
Confidence 135777888888763 3343358999999999999999988765100 135999999999876543
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.79 E-value=1e-18 Score=166.44 Aligned_cols=183 Identities=18% Similarity=0.227 Sum_probs=132.7
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEe--cCCCCCCcccccccCccccccccccccCCCcccccccc
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWIL--EVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQ 170 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~--D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 170 (476)
++|+||++||++++...| ..+++.|++ +|.|+++ |+||+|.|....... .
T Consensus 61 ~~p~vv~~HG~~~~~~~~-----~~~~~~l~~-~~~v~~~~~d~~g~g~s~~~~~~~--------------------~-- 112 (251)
T 2r8b_A 61 GAPLFVLLHGTGGDENQF-----FDFGARLLP-QATILSPVGDVSEHGAARFFRRTG--------------------E-- 112 (251)
T ss_dssp TSCEEEEECCTTCCHHHH-----HHHHHHHST-TSEEEEECCSEEETTEEESSCBCG--------------------G--
T ss_pred CCcEEEEEeCCCCCHhHH-----HHHHHhcCC-CceEEEecCCcCCCCCcccccCCC--------------------C--
Confidence 579999999999999888 578888876 4999999 899999874311100 0
Q ss_pred hhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCC
Q 011833 171 SKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKP 250 (476)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~ 250 (476)
. ..+..+ +.+ ..+|+.++++++.++.+.
T Consensus 113 -----------------------------------~--~~~~~~--------------~~~-~~~~~~~~l~~~~~~~~~ 140 (251)
T 2r8b_A 113 -----------------------------------G--VYDMVD--------------LER-ATGKMADFIKANREHYQA 140 (251)
T ss_dssp -----------------------------------G--CBCHHH--------------HHH-HHHHHHHHHHHHHHHHTC
T ss_pred -----------------------------------C--cCCHHH--------------HHH-HHHHHHHHHHHHHhccCC
Confidence 0 000011 111 136788888888776643
Q ss_pred CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhc
Q 011833 251 KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIH 330 (476)
Q Consensus 251 ~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (476)
++++++||||||.+++.++.++| .+|+++|++++......
T Consensus 141 --~~i~l~G~S~Gg~~a~~~a~~~p-----~~v~~~v~~~~~~~~~~--------------------------------- 180 (251)
T 2r8b_A 141 --GPVIGLGFSNGANILANVLIEQP-----ELFDAAVLMHPLIPFEP--------------------------------- 180 (251)
T ss_dssp --CSEEEEEETHHHHHHHHHHHHST-----TTCSEEEEESCCCCSCC---------------------------------
T ss_pred --CcEEEEEECHHHHHHHHHHHhCC-----cccCeEEEEecCCCccc---------------------------------
Confidence 49999999999999999999887 78999999988642110
Q ss_pred cCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEe
Q 011833 331 PFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALA 410 (476)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~ 410 (476)
......+++|+|+++
T Consensus 181 -----------------------------------------------------------------~~~~~~~~~P~li~~ 195 (251)
T 2r8b_A 181 -----------------------------------------------------------------KISPAKPTRRVLITA 195 (251)
T ss_dssp -----------------------------------------------------------------CCCCCCTTCEEEEEE
T ss_pred -----------------------------------------------------------------cccccccCCcEEEec
Confidence 001234689999999
Q ss_pred eCCCCcCCHHHHHHHHHhcC--CCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 411 ADQDLICPTEAVYETVKLIP--EHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 411 G~~D~~vp~~~~~~~~~~l~--~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
|++|.++|.+.++++.+.++ +..+.+ ++ ++.||... .+..+.+.+||+++
T Consensus 196 g~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~-----~~~gH~~~-------~~~~~~~~~~l~~~ 247 (251)
T 2r8b_A 196 GERDPICPVQLTKALEESLKAQGGTVET-VW-----HPGGHEIR-------SGEIDAVRGFLAAY 247 (251)
T ss_dssp ETTCTTSCHHHHHHHHHHHHHHSSEEEE-EE-----ESSCSSCC-------HHHHHHHHHHHGGG
T ss_pred cCCCccCCHHHHHHHHHHHHHcCCeEEE-Ee-----cCCCCccC-------HHHHHHHHHHHHHh
Confidence 99999999999999999998 343333 44 67899432 44578899999876
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.78 E-value=9.1e-18 Score=168.50 Aligned_cols=123 Identities=13% Similarity=0.093 Sum_probs=93.2
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecC---CCCCcceeecCCCCCHHHHHHh-CCCcEEEecCCCCCCcccccccCc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSG---IGTNAIGYDLSPEYSFARYMSG-QGFDTWILEVRGAGLSAHRVEFGE 148 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG---~~~~~~~~~~~~~~~l~~~L~~-~Gy~V~~~D~rG~G~S~~~~~~~~ 148 (476)
..+| .+.++.|.|.. .++.|+||++|| +.++...| ..+++.|++ .||.|+++|+||+|.+..+.
T Consensus 72 ~~~~-~i~~~iy~P~~--~~~~p~vv~~HGGg~~~g~~~~~-----~~~~~~La~~~g~~Vv~~Dyrg~~~~~~p~---- 139 (323)
T 3ain_A 72 GSET-NIKARVYYPKT--QGPYGVLVYYHGGGFVLGDIESY-----DPLCRAITNSCQCVTISVDYRLAPENKFPA---- 139 (323)
T ss_dssp CSSS-EEEEEEEECSS--CSCCCEEEEECCSTTTSCCTTTT-----HHHHHHHHHHHTSEEEEECCCCTTTSCTTH----
T ss_pred CCCC-eEEEEEEecCC--CCCCcEEEEECCCccccCChHHH-----HHHHHHHHHhcCCEEEEecCCCCCCCCCcc----
Confidence 3455 78888887764 245789999999 44677677 478888986 49999999999999863311
Q ss_pred cccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCC
Q 011833 149 DSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWD 228 (476)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (476)
T Consensus 140 -------------------------------------------------------------------------------- 139 (323)
T 3ain_A 140 -------------------------------------------------------------------------------- 139 (323)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhhccHHHHHHHHHHHhCC--CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccc---cEEEEeccccccc
Q 011833 229 FDHYLEEDVPAVMEYIRTLSKP--KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGF---ASVTTLASSLDYR 296 (476)
Q Consensus 229 ~~~~~~~Dl~a~i~~l~~~~~~--~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v---~~lvlla~~~~~~ 296 (476)
..+|+.++++++.+.... +.++++++||||||.+++.++.++| .++ +++|+++|..+..
T Consensus 140 ----~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~-----~~~~~~~~~vl~~p~~~~~ 203 (323)
T 3ain_A 140 ----AVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSK-----KENIKLKYQVLIYPAVSFD 203 (323)
T ss_dssp ----HHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHH-----HTTCCCSEEEEESCCCSCC
T ss_pred ----hHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhh-----hcCCCceeEEEEeccccCC
Confidence 136888888888776411 3458999999999999999998876 333 8999999876644
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.78 E-value=5.9e-19 Score=192.83 Aligned_cols=241 Identities=15% Similarity=0.171 Sum_probs=158.5
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCC-CCCCCCcEEEecCCCCCc---ceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPA-APQRNHPLLLLSGIGTNA---IGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSA 141 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~-~~~~~~~VlllHG~~~~~---~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~ 141 (476)
+...+. +.|| .+.++.|.|... ..++.|+||++||.+.+. ..|. .......|+++||.|+++|+||+|.+.
T Consensus 469 ~~~~~~-~~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~---~~~~~~~l~~~G~~vv~~d~rG~g~~g 543 (723)
T 1xfd_A 469 EYRDIE-IDDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFE---VSWETVMVSSHGAVVVKCDGRGSGFQG 543 (723)
T ss_dssp CBCCEE-ETTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCC---CSHHHHHHHTTCCEEECCCCTTCSSSH
T ss_pred eEEEEE-cCCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCcccc---ccHHHHHhhcCCEEEEEECCCCCcccc
Confidence 344455 4688 999999988652 224568899999998763 3342 013456677789999999999999863
Q ss_pred cccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhc
Q 011833 142 HRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDL 221 (476)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (476)
...... .
T Consensus 544 ~~~~~~---------------------------------------------------------------~---------- 550 (723)
T 1xfd_A 544 TKLLHE---------------------------------------------------------------V---------- 550 (723)
T ss_dssp HHHHHT---------------------------------------------------------------T----------
T ss_pred HHHHHH---------------------------------------------------------------H----------
Confidence 211000 0
Q ss_pred ccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC----CCCCCcccccEEEEecccccccC
Q 011833 222 IVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC----GFEGKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 222 ~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~----p~~~~~~~v~~lvlla~~~~~~~ 297 (476)
.-.+.....+|+.++++++.++...+..+++++||||||.+++.++.++ | .+++++|++++..++..
T Consensus 551 ----~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p-----~~~~~~v~~~~~~~~~~ 621 (723)
T 1xfd_A 551 ----RRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQG-----QTFTCGSALSPITDFKL 621 (723)
T ss_dssp ----TTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTC-----CCCSEEEEESCCCCTTS
T ss_pred ----HhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCC-----CeEEEEEEccCCcchHH
Confidence 0011122347889999998776433345899999999999999999987 7 78999999998765332
Q ss_pred ChhhHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHH
Q 011833 298 SNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQL 377 (476)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (476)
... .+....+..+.. ..+
T Consensus 622 ~~~----------------------------------------~~~~~~~~~~~~-~~~--------------------- 639 (723)
T 1xfd_A 622 YAS----------------------------------------AFSERYLGLHGL-DNR--------------------- 639 (723)
T ss_dssp SBH----------------------------------------HHHHHHHCCCSS-CCS---------------------
T ss_pred hhh----------------------------------------hccHhhcCCccC-Chh---------------------
Confidence 100 000000110000 000
Q ss_pred HHHHHhCCccccCCcccccccCCCCc-ccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCccccccc
Q 011833 378 TTVFQEGGLCDRSGTFFYKDHIGKTN-VPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVG 454 (476)
Q Consensus 378 ~~~~~~~~~~~~~g~~~~~~~l~~i~-vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~ 454 (476)
.+. .......+.+++ +|+|+++|++|.++|++.++++++.++.. .++++++ |++||.. .
T Consensus 640 -------~~~----~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~H~~--~ 701 (723)
T 1xfd_A 640 -------AYE----MTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIY-----PDESHYF--T 701 (723)
T ss_dssp -------STT----TTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEE-----TTCCSSC--C
T ss_pred -------HHH----hcChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEE-----CCCCccc--c
Confidence 000 000112456788 89999999999999999999999888532 3577777 8999943 1
Q ss_pred ccCCccchhHHHHHHHHhh
Q 011833 455 SRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 455 ~~~~~~~v~~~i~~fL~~~ 473 (476)
..+.++.+++.|++||+++
T Consensus 702 ~~~~~~~~~~~i~~fl~~~ 720 (723)
T 1xfd_A 702 SSSLKQHLYRSIINFFVEC 720 (723)
T ss_dssp CHHHHHHHHHHHHHHHTTT
T ss_pred cCcchHHHHHHHHHHHHHH
Confidence 3456788999999999876
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.3e-18 Score=185.95 Aligned_cols=247 Identities=17% Similarity=0.153 Sum_probs=161.1
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCC-CCCCCCcEEEecCCCCCcc--eeecCCCCCHHHHHHhCCCcEEEecCCCCCCccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPA-APQRNHPLLLLSGIGTNAI--GYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~-~~~~~~~VlllHG~~~~~~--~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~ 142 (476)
+...+. +.||..+.++.+.|... ..++.|+||++||...... .| ......|+++||.|+++|+||+|.+..
T Consensus 418 ~~~~~~-~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~rG~g~~g~ 491 (695)
T 2bkl_A 418 EQVFYA-SKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANF-----RSSILPWLDAGGVYAVANLRGGGEYGK 491 (695)
T ss_dssp EEEEEE-CTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCC-----CGGGHHHHHTTCEEEEECCTTSSTTCH
T ss_pred EEEEEE-CCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCc-----CHHHHHHHhCCCEEEEEecCCCCCcCH
Confidence 344454 57999999999887652 2346788999999766554 34 345667888999999999999987632
Q ss_pred ccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLI 222 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (476)
.- ....
T Consensus 492 ~~----------------------~~~~---------------------------------------------------- 497 (695)
T 2bkl_A 492 AW----------------------HDAG---------------------------------------------------- 497 (695)
T ss_dssp HH----------------------HHTT----------------------------------------------------
T ss_pred HH----------------------HHhh----------------------------------------------------
Confidence 10 0000
Q ss_pred cccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhH
Q 011833 223 VKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLL 302 (476)
Q Consensus 223 ~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~ 302 (476)
.........+|+.++++++.++...+.++++++||||||.+++.++.++| .+++++|+.++..++.....
T Consensus 498 ---~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p-----~~~~~~v~~~~~~d~~~~~~-- 567 (695)
T 2bkl_A 498 ---RLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRP-----ELYGAVVCAVPLLDMVRYHL-- 567 (695)
T ss_dssp ---SGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCG-----GGCSEEEEESCCCCTTTGGG--
T ss_pred ---HhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCC-----cceEEEEEcCCccchhhccc--
Confidence 00011112479999999998775545568999999999999999999887 88999999998876442100
Q ss_pred HHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHH
Q 011833 303 RLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQ 382 (476)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (476)
.+.. . .|... ++.+ .+++.++.+. .
T Consensus 568 -----------------~~~~-------------~---~~~~~-~g~~--~~~~~~~~~~-------------------~ 592 (695)
T 2bkl_A 568 -----------------FGSG-------------R---TWIPE-YGTA--EKPEDFKTLH-------------------A 592 (695)
T ss_dssp -----------------STTG-------------G---GGHHH-HCCT--TSHHHHHHHH-------------------H
T ss_pred -----------------cCCC-------------c---chHHH-hCCC--CCHHHHHHHH-------------------h
Confidence 0000 0 00000 0111 1122111110 0
Q ss_pred hCCccccCCcccccccCCCCc--ccEEEEeeCCCCcCCHHHHHHHHHhcCC-----CceeEEEecCCCCCCCcccccccc
Q 011833 383 EGGLCDRSGTFFYKDHIGKTN--VPVLALAADQDLICPTEAVYETVKLIPE-----HLVSFKVFGEPRGPHYAHYDLVGS 455 (476)
Q Consensus 383 ~~~~~~~~g~~~~~~~l~~i~--vPvLii~G~~D~~vp~~~~~~~~~~l~~-----~~~~~~v~~~~~~~~~gH~~~~~~ 455 (476)
... ...+.+++ .|+|+++|++|..||++.+.++++.++. ..+.++++ +++||... ..
T Consensus 593 ~sp----------~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~gH~~~-~~ 656 (695)
T 2bkl_A 593 YSP----------YHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIE-----ANAGHGGA-DQ 656 (695)
T ss_dssp HCG----------GGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEE-----TTCBTTBC-SC
T ss_pred cCh----------HhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEe-----CCCCcCCC-CC
Confidence 000 12455555 6999999999999999999999998865 34677777 89999431 11
Q ss_pred cCCccchhHHHHHHHHhh
Q 011833 456 RLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 456 ~~~~~~v~~~i~~fL~~~ 473 (476)
.+...+++..+++||.++
T Consensus 657 ~~~~~~~~~~~~~fl~~~ 674 (695)
T 2bkl_A 657 VAKAIESSVDLYSFLFQV 674 (695)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 233567888999999875
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=181.38 Aligned_cols=110 Identities=12% Similarity=0.153 Sum_probs=86.0
Q ss_pred CCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHh------CCCcEEEecCCCCCCcccccccC
Q 011833 74 NSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSG------QGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~------~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
.+|..+++.+..+.. ..+++|||+||++++...| ..++..|++ .||+|+++|+||||.|+....
T Consensus 92 i~g~~i~~~~~~~~~---~~~~pllllHG~~~s~~~~-----~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~-- 161 (408)
T 3g02_A 92 IEGLTIHFAALFSER---EDAVPIALLHGWPGSFVEF-----YPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPL-- 161 (408)
T ss_dssp ETTEEEEEEEECCSC---TTCEEEEEECCSSCCGGGG-----HHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCS--
T ss_pred ECCEEEEEEEecCCC---CCCCeEEEECCCCCcHHHH-----HHHHHHHhcccccccCceEEEEECCCCCCCCCCCCC--
Confidence 399999998885432 2468999999999999999 588899987 589999999999999976431
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
...|
T Consensus 162 ----------------------------------------------------------------------------~~~~ 165 (408)
T 3g02_A 162 ----------------------------------------------------------------------------DKDF 165 (408)
T ss_dssp ----------------------------------------------------------------------------SSCC
T ss_pred ----------------------------------------------------------------------------CCCC
Confidence 0135
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCC
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCG 275 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p 275 (476)
++++++ +|+.++++.+ +.+ .+++++||||||.+++.+|.++|
T Consensus 166 ~~~~~a-~~~~~l~~~l----g~~-~~~~lvG~S~Gg~ia~~~A~~~p 207 (408)
T 3g02_A 166 GLMDNA-RVVDQLMKDL----GFG-SGYIIQGGDIGSFVGRLLGVGFD 207 (408)
T ss_dssp CHHHHH-HHHHHHHHHT----TCT-TCEEEEECTHHHHHHHHHHHHCT
T ss_pred CHHHHH-HHHHHHHHHh----CCC-CCEEEeCCCchHHHHHHHHHhCC
Confidence 666666 6666666643 331 27999999999999999999876
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.78 E-value=8.2e-19 Score=169.71 Aligned_cols=211 Identities=9% Similarity=0.077 Sum_probs=134.4
Q ss_pred CCCCcEEEecCCC-----CCcceeecCCCCCHHHHH----HhCCCcEEEecCCCCCCcccccccCccccccccccccCCC
Q 011833 92 QRNHPLLLLSGIG-----TNAIGYDLSPEYSFARYM----SGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGG 162 (476)
Q Consensus 92 ~~~~~VlllHG~~-----~~~~~~~~~~~~~l~~~L----~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~ 162 (476)
+.+|+||++||.+ .+...| ..+++.| ++.||.|+++|+|+++.+..
T Consensus 39 ~~~p~vv~lHGgg~~~g~~~~~~~-----~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~-------------------- 93 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPENTPNDF-----NQLANTIKSMDTESTVCQYSIEYRLSPEITN-------------------- 93 (273)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGG-----HHHHHHHHHHCTTCCEEEEEECCCCTTTSCT--------------------
T ss_pred CCCeEEEEECCCcccCCcCChHHH-----HHHHHHHhhhhccCCcEEEEeecccCCCCCC--------------------
Confidence 3578999999954 345556 4788888 57899999999998765321
Q ss_pred cccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHH
Q 011833 163 TTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVME 242 (476)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~ 242 (476)
.. ..+|+.++++
T Consensus 94 -------------------------------------------------------------------~~-~~~d~~~~~~ 105 (273)
T 1vkh_A 94 -------------------------------------------------------------------PR-NLYDAVSNIT 105 (273)
T ss_dssp -------------------------------------------------------------------TH-HHHHHHHHHH
T ss_pred -------------------------------------------------------------------Cc-HHHHHHHHHH
Confidence 11 1368888899
Q ss_pred HHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCC----CC--------CcccccEEEEecccccccCChhhHHHhhcCcc
Q 011833 243 YIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGF----EG--------KDSGFASVTTLASSLDYRPSNSLLRLLLPLSD 310 (476)
Q Consensus 243 ~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~----~~--------~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~ 310 (476)
++.+..+. ++++++||||||.+++.++.+++- .. ...+|+++|++++..+.....
T Consensus 106 ~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~----------- 172 (273)
T 1vkh_A 106 RLVKEKGL--TNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELL----------- 172 (273)
T ss_dssp HHHHHHTC--CCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHH-----------
T ss_pred HHHHhCCc--CcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhh-----------
Confidence 98887654 489999999999999999988510 00 026799999998765422110
Q ss_pred hhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccC
Q 011833 311 PIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRS 390 (476)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (476)
.. .. . ...++...+.. ..+. + .........+.
T Consensus 173 ----------------~~-~~-----~-~~~~~~~~~~~----~~~~--------~-~~~~~~~~~~~------------ 204 (273)
T 1vkh_A 173 ----------------IE-YP-----E-YDCFTRLAFPD----GIQM--------Y-EEEPSRVMPYV------------ 204 (273)
T ss_dssp ----------------HH-CG-----G-GHHHHHHHCTT----CGGG--------C-CCCHHHHHHHH------------
T ss_pred ----------------hh-cc-----c-HHHHHHHHhcc----cccc--------h-hhcccccChhh------------
Confidence 00 00 0 00001111100 0000 0 00000000000
Q ss_pred CcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchhHHHHH
Q 011833 391 GTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIE 468 (476)
Q Consensus 391 g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~ 468 (476)
...+.++++|+|+++|++|.++|++.++++.+.+++. .++++++ +++||... .+. +++.+.|++
T Consensus 205 -----~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~-----~~~gH~~~---~~~-~~~~~~i~~ 270 (273)
T 1vkh_A 205 -----KKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLD-----DLGLHNDV---YKN-GKVAKYIFD 270 (273)
T ss_dssp -----HHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEE-----CCCSGGGG---GGC-HHHHHHHHH
T ss_pred -----hhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEe-----CCCccccc---ccC-hHHHHHHHH
Confidence 0012237899999999999999999999999988643 3577777 89999644 344 888999998
Q ss_pred HH
Q 011833 469 FL 470 (476)
Q Consensus 469 fL 470 (476)
||
T Consensus 271 fl 272 (273)
T 1vkh_A 271 NI 272 (273)
T ss_dssp TC
T ss_pred Hc
Confidence 87
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.78 E-value=6.3e-19 Score=173.78 Aligned_cols=224 Identities=13% Similarity=0.126 Sum_probs=143.4
Q ss_pred ceEEEEEEEcCCCCCCCCCCcEEEecCC---CCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 76 DWRLALWRYLPSPAAPQRNHPLLLLSGI---GTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 76 G~~L~~~~~~p~~~~~~~~~~VlllHG~---~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+..+.+..|.|... .++.|+||++||. .++...| ..++..|+++||.|+++|+||+|.+...
T Consensus 65 ~~~~~~~~~~p~~~-~~~~p~vv~~HGgg~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~r~~~~~~~~--------- 129 (303)
T 4e15_A 65 EGRQLVDVFYSEKT-TNQAPLFVFVHGGYWQEMDMSMS-----CSIVGPLVRRGYRVAVMDYNLCPQVTLE--------- 129 (303)
T ss_dssp STTCEEEEEECTTC-CTTCCEEEEECCSTTTSCCGGGS-----CTTHHHHHHTTCEEEEECCCCTTTSCHH---------
T ss_pred CCCcEEEEEecCCC-CCCCCEEEEECCCcCcCCChhHH-----HHHHHHHHhCCCEEEEecCCCCCCCChh---------
Confidence 43445555556432 3467999999994 3444555 5788999999999999999999875221
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.
T Consensus 130 ------------------------------------------------------------------------------~- 130 (303)
T 4e15_A 130 ------------------------------------------------------------------------------Q- 130 (303)
T ss_dssp ------------------------------------------------------------------------------H-
T ss_pred ------------------------------------------------------------------------------H-
Confidence 1
Q ss_pred hhccHHHHHHHHHHHh-CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCc--ccccEEEEecccccccCChhhHHHhhcCc
Q 011833 233 LEEDVPAVMEYIRTLS-KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKD--SGFASVTTLASSLDYRPSNSLLRLLLPLS 309 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~-~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~--~~v~~lvlla~~~~~~~~~~~~~~~~~~~ 309 (476)
..+|+.++++++.+.. ..+.++++++||||||.+++.++.+.+..... .+|+++|++++..++....
T Consensus 131 ~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~---------- 200 (303)
T 4e15_A 131 LMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELS---------- 200 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHH----------
T ss_pred HHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhh----------
Confidence 1368888899887631 11235899999999999999998764311110 2799999999876533210
Q ss_pred chhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCcccc
Q 011833 310 DPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDR 389 (476)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (476)
...... ....+. .+++.+ ...
T Consensus 201 -----------------~~~~~~----------~~~~~~----~~~~~~----------------------------~~~ 221 (303)
T 4e15_A 201 -----------------NLESVN----------PKNILG----LNERNI----------------------------ESV 221 (303)
T ss_dssp -----------------TCTTTS----------GGGTTC----CCTTTT----------------------------TTT
T ss_pred -----------------cccccc----------hhhhhc----CCHHHH----------------------------HHc
Confidence 000000 000000 000000 000
Q ss_pred CCcccccccCCC----CcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchh
Q 011833 390 SGTFFYKDHIGK----TNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVY 463 (476)
Q Consensus 390 ~g~~~~~~~l~~----i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~ 463 (476)
......+.+ +++|+|+++|++|.++|.+.++++++.++.. .++++++ ++.+|+.++ +......
T Consensus 222 ---sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~-----~g~~H~~~~---~~~~~~~ 290 (303)
T 4e15_A 222 ---SPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLF-----KGYDHFDII---EETAIDD 290 (303)
T ss_dssp ---CGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEE-----EEEETTHHH---HGGGSTT
T ss_pred ---CchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEEe-----CCCCchHHH---HHHhCCC
Confidence 000012333 4899999999999999999999999988643 4677877 899997764 4455666
Q ss_pred HHHHHHHHhh
Q 011833 464 PCIIEFLTRH 473 (476)
Q Consensus 464 ~~i~~fL~~~ 473 (476)
..+.+||.+.
T Consensus 291 ~~l~~~l~~~ 300 (303)
T 4e15_A 291 SDVSRFLRNI 300 (303)
T ss_dssp SHHHHHHHHH
T ss_pred cHHHHHHHHh
Confidence 6777776543
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.78 E-value=9.4e-19 Score=175.21 Aligned_cols=128 Identities=14% Similarity=0.120 Sum_probs=88.6
Q ss_pred ceEEEEEEEcCCCC--CCCCCCcEEEecCCCCC---cce--eecCCCCCHHHHHH-hCCCcEEEecCCCCCCcccccccC
Q 011833 76 DWRLALWRYLPSPA--APQRNHPLLLLSGIGTN---AIG--YDLSPEYSFARYMS-GQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 76 G~~L~~~~~~p~~~--~~~~~~~VlllHG~~~~---~~~--~~~~~~~~l~~~L~-~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
|..+.+..|.|... ..++.|+||++||.+.. ... | ..++..|+ +.||.|+++|+||++.+...
T Consensus 63 ~~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~-----~~~~~~la~~~g~~vv~~d~rg~~~~~~~---- 133 (338)
T 2o7r_A 63 LHNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIF-----HDFCCEMAVHAGVVIASVDYRLAPEHRLP---- 133 (338)
T ss_dssp TTTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHH-----HHHHHHHHHHHTCEEEEEECCCTTTTCTT----
T ss_pred CCCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhH-----HHHHHHHHHHCCcEEEEecCCCCCCCCCc----
Confidence 44556666666432 12456889999997632 222 5 46778887 78999999999998764221
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
T Consensus 134 -------------------------------------------------------------------------------- 133 (338)
T 2o7r_A 134 -------------------------------------------------------------------------------- 133 (338)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CchhhhhccHHHHHHHHHHHhC------CCCCcEeEEEEchHHHHHHHHHhcCCC--CC-CcccccEEEEeccccccc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSK------PKDGKLLAVGHSMGGILLYAMLSHCGF--EG-KDSGFASVTTLASSLDYR 296 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~------~~~~ki~lvGhS~GG~ia~~~a~~~p~--~~-~~~~v~~lvlla~~~~~~ 296 (476)
. ..+|+.++++++.+... .+.++++++||||||.+++.++.++|- .+ ...+|+++|+++|..+..
T Consensus 134 ---~-~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~ 207 (338)
T 2o7r_A 134 ---A-AYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGS 207 (338)
T ss_dssp ---H-HHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCS
T ss_pred ---h-HHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCC
Confidence 1 13688888999876421 122489999999999999999988760 00 002799999999876544
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.7e-19 Score=162.53 Aligned_cols=60 Identities=12% Similarity=0.003 Sum_probs=48.5
Q ss_pred cCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 398 HIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 398 ~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
.+.++++|+|+|+|++|.+||++.+.++++ +. ++.++ ++++|. + ...+++++.|.+||+-
T Consensus 132 ~~~~~~~P~LiihG~~D~~Vp~~~s~~l~~---~~--~l~i~-----~g~~H~-~----~~~~~~~~~I~~FL~~ 191 (202)
T 4fle_A 132 EKLESPDLLWLLQQTGDEVLDYRQAVAYYT---PC--RQTVE-----SGGNHA-F----VGFDHYFSPIVTFLGL 191 (202)
T ss_dssp SSCSCGGGEEEEEETTCSSSCHHHHHHHTT---TS--EEEEE-----SSCCTT-C----TTGGGGHHHHHHHHTC
T ss_pred hhhccCceEEEEEeCCCCCCCHHHHHHHhh---CC--EEEEE-----CCCCcC-C----CCHHHHHHHHHHHHhh
Confidence 567789999999999999999999887764 43 56666 899992 2 3457899999999974
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-17 Score=185.31 Aligned_cols=248 Identities=14% Similarity=0.071 Sum_probs=155.4
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
+..++. ..||..+.++.+.|... .++.|+||++||.+.....+. .......|+++||.|+++|+||+|.+...-
T Consensus 462 ~~~~~~-~~dg~~i~~~~~~p~~~-~~~~p~vl~~hGg~~~~~~~~---~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~- 535 (741)
T 1yr2_A 462 EQVFYP-SKDGTKVPMFIVRRKDA-KGPLPTLLYGYGGFNVALTPW---FSAGFMTWIDSGGAFALANLRGGGEYGDAW- 535 (741)
T ss_dssp EEEEEE-CTTSCEEEEEEEEETTC-CSCCCEEEECCCCTTCCCCCC---CCHHHHHHHTTTCEEEEECCTTSSTTHHHH-
T ss_pred EEEEEE-cCCCCEEEEEEEecCCC-CCCCcEEEEECCCCCccCCCC---cCHHHHHHHHCCcEEEEEecCCCCCCCHHH-
Confidence 344444 57999999999987653 346799999999877665331 134566788999999999999999763211
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
....
T Consensus 536 ---------------------~~~~------------------------------------------------------- 539 (741)
T 1yr2_A 536 ---------------------HDAG------------------------------------------------------- 539 (741)
T ss_dssp ---------------------HHTT-------------------------------------------------------
T ss_pred ---------------------HHhh-------------------------------------------------------
Confidence 0000
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHh
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLL 305 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~ 305 (476)
...+.....+|+.++++++.++...+.++++++||||||.+++.++.++| .+++++|+.++..++.....
T Consensus 540 ~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p-----~~~~~~v~~~~~~d~~~~~~----- 609 (741)
T 1yr2_A 540 RRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRP-----DLFAAASPAVGVMDMLRFDQ----- 609 (741)
T ss_dssp SGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCG-----GGCSEEEEESCCCCTTSGGG-----
T ss_pred hhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCc-----hhheEEEecCCccccccccC-----
Confidence 00001112378999999998874444569999999999999999999887 88999999998765432100
Q ss_pred hcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC
Q 011833 306 LPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG 385 (476)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (476)
.+. .. .|... ...+ .+++.++.+. .
T Consensus 610 --------------~~~-------------~~---~~~~~-~g~~--~~~~~~~~~~-------------------~--- 634 (741)
T 1yr2_A 610 --------------FTA-------------GR---YWVDD-YGYP--EKEADWRVLR-------------------R--- 634 (741)
T ss_dssp --------------STT-------------GG---GGHHH-HCCT--TSHHHHHHHH-------------------T---
T ss_pred --------------CCC-------------Cc---hhHHH-cCCC--CCHHHHHHHH-------------------H---
Confidence 000 00 00000 0111 1122221111 0
Q ss_pred ccccCCcccccccCCC-Ccc-cEEEEeeCCCCcCCHHHHHHHHHhcCC-----CceeEEEecCCCCCCCcccccccccCC
Q 011833 386 LCDRSGTFFYKDHIGK-TNV-PVLALAADQDLICPTEAVYETVKLIPE-----HLVSFKVFGEPRGPHYAHYDLVGSRLA 458 (476)
Q Consensus 386 ~~~~~g~~~~~~~l~~-i~v-PvLii~G~~D~~vp~~~~~~~~~~l~~-----~~~~~~v~~~~~~~~~gH~~~~~~~~~ 458 (476)
......+.+ +++ |+|+++|++|..||+..+.++++.+++ ..+.++++ +++||... ...+.
T Consensus 635 -------~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~-----~~~gH~~~-~~~~~ 701 (741)
T 1yr2_A 635 -------YSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIE-----TRAGHGSG-KPIDK 701 (741)
T ss_dssp -------TCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------------CHHH
T ss_pred -------cCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEe-----CCCCcCCC-CCHHH
Confidence 000124555 785 999999999999999999999988865 23567776 89999432 11122
Q ss_pred ccchhHHHHHHHHhh
Q 011833 459 AYQVYPCIIEFLTRH 473 (476)
Q Consensus 459 ~~~v~~~i~~fL~~~ 473 (476)
..+++..+.+||.++
T Consensus 702 ~~~~~~~~~~fl~~~ 716 (741)
T 1yr2_A 702 QIEETADVQAFLAHF 716 (741)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 357889999999875
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.1e-17 Score=182.03 Aligned_cols=249 Identities=13% Similarity=0.100 Sum_probs=159.8
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCC-CCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHh-CCCcEEEecCCCCCCcccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPA-APQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSG-QGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~-~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~-~Gy~V~~~D~rG~G~S~~~ 143 (476)
+..++. ..||..+.++.+.|... ..++.|+||++||.+.....+.. ......|++ +||.|+++|+||+|.+...
T Consensus 438 ~~~~~~-~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~---~~~~~~l~~~~G~~v~~~d~rG~g~~g~~ 513 (710)
T 2xdw_A 438 VQIFYP-SKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNY---SVSRLIFVRHMGGVLAVANIRGGGEYGET 513 (710)
T ss_dssp EEEEEE-CTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCC---CHHHHHHHHHHCCEEEEECCTTSSTTHHH
T ss_pred EEEEEE-cCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcc---cHHHHHHHHhCCcEEEEEccCCCCCCChH
Confidence 344444 57999999999887652 23467899999998766644310 234556777 9999999999999976321
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
- .... .
T Consensus 514 ~----------------------~~~~-----------------------------------------~----------- 519 (710)
T 2xdw_A 514 W----------------------HKGG-----------------------------------------I----------- 519 (710)
T ss_dssp H----------------------HHTT-----------------------------------------S-----------
T ss_pred H----------------------HHhh-----------------------------------------h-----------
Confidence 1 0000 0
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHH
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLR 303 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~ 303 (476)
........+|+.++++++.++...+.++++++|||+||.+++.++.++| .+++++|+.++..++....
T Consensus 520 ---~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p-----~~~~~~v~~~~~~d~~~~~---- 587 (710)
T 2xdw_A 520 ---LANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRP-----DLFGCVIAQVGVMDMLKFH---- 587 (710)
T ss_dssp ---GGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCG-----GGCSEEEEESCCCCTTTGG----
T ss_pred ---hhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCc-----cceeEEEEcCCcccHhhcc----
Confidence 0000112368999999998874444568999999999999999999987 8899999999877643210
Q ss_pred HhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHh
Q 011833 304 LLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQE 383 (476)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (476)
.. .... .|... +..+ .+++.+..+. ..
T Consensus 588 ---------------------------~~-~~~~---~~~~~-~g~~--~~~~~~~~~~-------------------~~ 614 (710)
T 2xdw_A 588 ---------------------------KY-TIGH---AWTTD-YGCS--DSKQHFEWLI-------------------KY 614 (710)
T ss_dssp ---------------------------GS-TTGG---GGHHH-HCCT--TSHHHHHHHH-------------------HH
T ss_pred ---------------------------cc-CCCh---hHHHh-CCCC--CCHHHHHHHH-------------------Hh
Confidence 00 0000 01000 0111 1112111111 00
Q ss_pred CCccccCCcccccccCC-----CCcc-cEEEEeeCCCCcCCHHHHHHHHHhcCC---------CceeEEEecCCCCCCCc
Q 011833 384 GGLCDRSGTFFYKDHIG-----KTNV-PVLALAADQDLICPTEAVYETVKLIPE---------HLVSFKVFGEPRGPHYA 448 (476)
Q Consensus 384 ~~~~~~~g~~~~~~~l~-----~i~v-PvLii~G~~D~~vp~~~~~~~~~~l~~---------~~~~~~v~~~~~~~~~g 448 (476)
.. ...+. ++++ |+|+++|++|..||+..+.++++.++. ..+.++++ +++|
T Consensus 615 sp----------~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~g 679 (710)
T 2xdw_A 615 SP----------LHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVD-----TKAG 679 (710)
T ss_dssp CG----------GGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEE-----SSCC
T ss_pred Cc----------HhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEe-----CCCC
Confidence 11 12344 6887 999999999999999999998887753 24567776 8999
Q ss_pred ccccccccCCccchhHHHHHHHHhh
Q 011833 449 HYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 449 H~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
|... ...+...+++..+++||.++
T Consensus 680 H~~~-~~~~~~~~~~~~~~~fl~~~ 703 (710)
T 2xdw_A 680 HGAG-KPTAKVIEEVSDMFAFIARC 703 (710)
T ss_dssp SSTT-CCHHHHHHHHHHHHHHHHHH
T ss_pred cCCC-CCHHHHHHHHHHHHHHHHHH
Confidence 9432 11122457889999999876
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=7.5e-18 Score=171.40 Aligned_cols=255 Identities=14% Similarity=0.064 Sum_probs=151.7
Q ss_pred eEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCC---CCcc--eeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccc
Q 011833 69 YVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIG---TNAI--GYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 69 ~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~--~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~ 143 (476)
.+. ..+|..|.++.|.|.... .+.|+||++||.+ ++.. .| ..++..|+++||.|+++|+||+|.|+..
T Consensus 86 ~~~-~~~g~~l~~~v~~p~~~~-~~~p~vv~iHGgg~~~g~~~~~~~-----~~~~~~la~~g~~vv~~d~r~~gg~~~~ 158 (361)
T 1jkm_A 86 TIL-GVDGNEITLHVFRPAGVE-GVLPGLVYTHGGGMTILTTDNRVH-----RRWCTDLAAAGSVVVMVDFRNAWTAEGH 158 (361)
T ss_dssp EEE-CTTSCEEEEEEEEETTCC-SCEEEEEEECCSTTTSSCSSSHHH-----HHHHHHHHHTTCEEEEEECCCSEETTEE
T ss_pred eee-cCCCCeEEEEEEeCCCCC-CCCeEEEEEcCCccccCCCcccch-----hHHHHHHHhCCCEEEEEecCCCCCCCCC
Confidence 444 567878999888876541 2468999999987 6665 56 4678899989999999999999866421
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
..
T Consensus 159 ~~------------------------------------------------------------------------------ 160 (361)
T 1jkm_A 159 HP------------------------------------------------------------------------------ 160 (361)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 11
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS 300 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~ 300 (476)
+.. ..+|+.++++++.+.. +.+ +++++|||+||.+++.++....-.+...+|+++|++++..+......
T Consensus 161 -----~~~-~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~ 232 (361)
T 1jkm_A 161 -----FPS-GVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWD 232 (361)
T ss_dssp -----TTH-HHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSC
T ss_pred -----CCc-cHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccccccccc
Confidence 001 1368888888887653 443 89999999999999998876110001158999999999876422100
Q ss_pred hHHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHH
Q 011833 301 LLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTV 380 (476)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (476)
...... ... .+... ....+....+.. +...
T Consensus 233 ~~~~~~----------------------~~~---------~~~~~---~~~~~~~~~~~~----------------~~~~ 262 (361)
T 1jkm_A 233 HERRLT----------------------ELP---------SLVEN---DGYFIENGGMAL----------------LVRA 262 (361)
T ss_dssp HHHHHH----------------------HCT---------HHHHT---TTSSSCHHHHHH----------------HHHH
T ss_pred cccccc----------------------cCc---------chhhc---cCcccCHHHHHH----------------HHHH
Confidence 000000 000 00000 000011111111 1111
Q ss_pred HHhCCcc--c-cCCcc-cccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCccccc-c
Q 011833 381 FQEGGLC--D-RSGTF-FYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDL-V 453 (476)
Q Consensus 381 ~~~~~~~--~-~~g~~-~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~-~ 453 (476)
+...... . ..... .....+.++. |+|+++|++|.++| ....+.+.+++. .++++++ ++++|.-. .
T Consensus 263 ~~~~~~~~~~~~~~p~~~~~~~l~~l~-P~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~l~~~-----~g~~H~~~~~ 334 (361)
T 1jkm_A 263 YDPTGEHAEDPIAWPYFASEDELRGLP-PFVVAVNELDPLRD--EGIAFARRLARAGVDVAARVN-----IGLVHGADVI 334 (361)
T ss_dssp HSSSSTTTTCTTTCGGGCCHHHHTTCC-CEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEE-----TTCCTTHHHH
T ss_pred hCCCCCCCCCcccCccccChhhHcCCC-ceEEEEcCcCcchh--hHHHHHHHHHHcCCCEEEEEe-----CCCccCcccc
Confidence 1100000 0 00000 0122456666 99999999999997 566666666433 4677777 89999543 2
Q ss_pred cc--cCCc-cchhHHHHHHHHhhc
Q 011833 454 GS--RLAA-YQVYPCIIEFLTRHD 474 (476)
Q Consensus 454 ~~--~~~~-~~v~~~i~~fL~~~~ 474 (476)
.. .+.. +++++.|.+||+++.
T Consensus 335 ~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 335 FRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp SGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHhh
Confidence 21 2334 778999999998763
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.76 E-value=6.1e-18 Score=158.17 Aligned_cols=201 Identities=13% Similarity=0.027 Sum_probs=136.9
Q ss_pred CceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccc
Q 011833 75 SDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITS 154 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~ 154 (476)
++..+.+..++|.. ..+|+||++||++++...| ..+++.|++ ||.|+++|.+++... ...++
T Consensus 14 ~~~~l~~~~~~~~~---~~~p~vv~lHG~g~~~~~~-----~~~~~~l~~-~~~vv~~d~~~~~~~-g~~~~-------- 75 (223)
T 3b5e_A 14 TDLAFPYRLLGAGK---ESRECLFLLHGSGVDETTL-----VPLARRIAP-TATLVAARGRIPQED-GFRWF-------- 75 (223)
T ss_dssp CSSSSCEEEESTTS---SCCCEEEEECCTTBCTTTT-----HHHHHHHCT-TSEEEEECCSEEETT-EEESS--------
T ss_pred cCCCceEEEeCCCC---CCCCEEEEEecCCCCHHHH-----HHHHHhcCC-CceEEEeCCCCCcCC-ccccc--------
Confidence 34455555554432 2358999999999999888 478888875 999999998875221 11110
Q ss_pred cccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhh
Q 011833 155 ANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLE 234 (476)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (476)
.... . . ..... ++.+. .
T Consensus 76 -------------~~~~--------------------~-----~----------~~~~~--------------~~~~~-~ 92 (223)
T 3b5e_A 76 -------------ERID--------------------P-----T----------RFEQK--------------SILAE-T 92 (223)
T ss_dssp -------------CEEE--------------------T-----T----------EECHH--------------HHHHH-H
T ss_pred -------------cccC--------------------C-----C----------cccHH--------------HHHHH-H
Confidence 0000 0 0 00000 11122 3
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhh
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQA 314 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~ 314 (476)
+|+.++++.+.+..+.+.++++++||||||.+++.++.++| .+++++|++++......
T Consensus 93 ~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-----~~~~~~v~~~~~~~~~~----------------- 150 (223)
T 3b5e_A 93 AAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHP-----GIVRLAALLRPMPVLDH----------------- 150 (223)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHST-----TSCSEEEEESCCCCCSS-----------------
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCc-----cccceEEEecCccCccc-----------------
Confidence 67888888888776665569999999999999999999887 78999999887532100
Q ss_pred ccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCccc
Q 011833 315 LNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFF 394 (476)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 394 (476)
+
T Consensus 151 -------------------------------------------------------~------------------------ 151 (223)
T 3b5e_A 151 -------------------------------------------------------V------------------------ 151 (223)
T ss_dssp -------------------------------------------------------C------------------------
T ss_pred -------------------------------------------------------c------------------------
Confidence 0
Q ss_pred ccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 395 YKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 395 ~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
.....+++|+|+++|++|.++|.+.++ +.+.+++. .++++++ + .||.-. .+..+.+.+||++
T Consensus 152 --~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~-----~-~gH~~~-------~~~~~~i~~~l~~ 215 (223)
T 3b5e_A 152 --PATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARII-----P-SGHDIG-------DPDAAIVRQWLAG 215 (223)
T ss_dssp --CCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEE-----S-CCSCCC-------HHHHHHHHHHHHC
T ss_pred --ccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEe-----c-CCCCcC-------HHHHHHHHHHHHh
Confidence 011235789999999999999999998 88888643 4567776 7 999322 3346789999986
Q ss_pred h
Q 011833 473 H 473 (476)
Q Consensus 473 ~ 473 (476)
.
T Consensus 216 ~ 216 (223)
T 3b5e_A 216 P 216 (223)
T ss_dssp C
T ss_pred h
Confidence 4
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.4e-18 Score=153.90 Aligned_cols=126 Identities=13% Similarity=0.100 Sum_probs=93.3
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhh
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQA 314 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~ 314 (476)
+|+.++++.+ + ++++++||||||.+++.++.++| .+|+++|++++.......
T Consensus 63 ~~~~~~~~~~----~---~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~~~---------------- 114 (191)
T 3bdv_A 63 LAIRRELSVC----T---QPVILIGHSFGALAACHVVQQGQ-----EGIAGVMLVAPAEPMRFE---------------- 114 (191)
T ss_dssp HHHHHHHHTC----S---SCEEEEEETHHHHHHHHHHHTTC-----SSEEEEEEESCCCGGGGT----------------
T ss_pred HHHHHHHHhc----C---CCeEEEEEChHHHHHHHHHHhcC-----CCccEEEEECCCcccccc----------------
Confidence 5665555532 2 48999999999999999999987 789999999986531100
Q ss_pred ccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCccc
Q 011833 315 LNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFF 394 (476)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 394 (476)
+ + + .
T Consensus 115 ------------------~----------------~-----~-----------~-------------------------- 118 (191)
T 3bdv_A 115 ------------------I----------------D-----D-----------R-------------------------- 118 (191)
T ss_dssp ------------------C----------------T-----T-----------T--------------------------
T ss_pred ------------------C----------------c-----c-----------c--------------------------
Confidence 0 0 0 0
Q ss_pred ccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 395 YKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 395 ~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
..+.++++|+++++|++|.++|++.++++.+.+ + .+++++ +++||...........++.+.|.+||++..
T Consensus 119 --~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-~--~~~~~~-----~~~gH~~~~~~~~~~~~~~~~i~~fl~~~~ 188 (191)
T 3bdv_A 119 --IQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW-D--SELVDV-----GEAGHINAEAGFGPWEYGLKRLAEFSEILI 188 (191)
T ss_dssp --SCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH-T--CEEEEC-----CSCTTSSGGGTCSSCHHHHHHHHHHHHTTC
T ss_pred --cccccCCCCEEEEecCCCCcCCHHHHHHHHHhc-C--CcEEEe-----CCCCcccccccchhHHHHHHHHHHHHHHhc
Confidence 135678999999999999999999999999987 3 367776 899996543222234556699999998753
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.76 E-value=3e-17 Score=164.07 Aligned_cols=238 Identities=14% Similarity=0.124 Sum_probs=143.2
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCc-EEEecCCC---CCcceeecCCCCCHHHHHHhC-CCcEEEecCCCCCCcc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHP-LLLLSGIG---TNAIGYDLSPEYSFARYMSGQ-GFDTWILEVRGAGLSA 141 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~-VlllHG~~---~~~~~~~~~~~~~l~~~L~~~-Gy~V~~~D~rG~G~S~ 141 (476)
...+.+ +|..+ + + |... +.+++ ||++||.+ ++...| ..++..|+++ ||.|+++|+|+++.+.
T Consensus 60 ~~~~~~--~g~~~--~-~-p~~~--~~~~~~vv~~HGgg~~~g~~~~~-----~~~~~~la~~~g~~v~~~dyr~~~~~~ 126 (322)
T 3k6k_A 60 LTLTDL--GGVPC--I-R-QATD--GAGAAHILYFHGGGYISGSPSTH-----LVLTTQLAKQSSATLWSLDYRLAPENP 126 (322)
T ss_dssp EEEEEE--TTEEE--E-E-EECT--TCCSCEEEEECCSTTTSCCHHHH-----HHHHHHHHHHHTCEEEEECCCCTTTSC
T ss_pred EEEEEE--CCEeE--E-e-cCCC--CCCCeEEEEEcCCcccCCChHHH-----HHHHHHHHHhcCCEEEEeeCCCCCCCC
Confidence 344444 88777 2 3 3322 34577 99999965 566566 4677888764 9999999999987642
Q ss_pred cccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhc
Q 011833 142 HRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDL 221 (476)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (476)
.+.
T Consensus 127 ~~~----------------------------------------------------------------------------- 129 (322)
T 3k6k_A 127 FPA----------------------------------------------------------------------------- 129 (322)
T ss_dssp TTH-----------------------------------------------------------------------------
T ss_pred Cch-----------------------------------------------------------------------------
Confidence 211
Q ss_pred ccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhh
Q 011833 222 IVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSL 301 (476)
Q Consensus 222 ~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~ 301 (476)
..+|+.++++++.++ +.+.++++++|||+||.+++.++.+++-.+ ...++++|+++|..+.......
T Consensus 130 -----------~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~-~~~~~~~vl~~p~~~~~~~~~~ 196 (322)
T 3k6k_A 130 -----------AVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDG-LPMPAGLVMLSPFVDLTLSRWS 196 (322)
T ss_dssp -----------HHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTT-CCCCSEEEEESCCCCTTCCSHH
T ss_pred -----------HHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcC-CCCceEEEEecCCcCcccCccc
Confidence 137889999999887 334469999999999999999998766111 1349999999998775543211
Q ss_pred HHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHH
Q 011833 302 LRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVF 381 (476)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (476)
..... .... ....+.+ ..+...+
T Consensus 197 ~~~~~----------------------~~~~-------------------~~~~~~~----------------~~~~~~~ 219 (322)
T 3k6k_A 197 NSNLA----------------------DRDF-------------------LAEPDTL----------------GEMSELY 219 (322)
T ss_dssp HHHTG----------------------GGCS-------------------SSCHHHH----------------HHHHHHH
T ss_pred hhhcc----------------------CCCC-------------------cCCHHHH----------------HHHHHHh
Confidence 11000 0000 0001110 0111111
Q ss_pred HhCC-ccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccc--c
Q 011833 382 QEGG-LCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGS--R 456 (476)
Q Consensus 382 ~~~~-~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~--~ 456 (476)
..+. ..+..... ....+ +...|+|+++|++|.++ ..+..+.+.+... .++++++ ++.+|.-.... .
T Consensus 220 ~~~~~~~~~~~sp-~~~~~-~~~pP~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~l~~~-----~g~~H~~~~~~~~~ 290 (322)
T 3k6k_A 220 VGGEDRKNPLISP-VYADL-SGLPEMLIHVGSEEALL--SDSTTLAERAGAAGVSVELKIW-----PDMPHVFQMYGKFV 290 (322)
T ss_dssp HTTSCTTCTTTCG-GGSCC-TTCCCEEEEEESSCTTH--HHHHHHHHHHHHTTCCEEEEEE-----TTCCTTGGGGTTTC
T ss_pred cCCCCCCCCcCCc-ccccc-cCCCcEEEEECCcCccH--HHHHHHHHHHHHCCCCEEEEEE-----CCCccccccccccC
Confidence 1000 00000000 00111 22369999999999884 4566666665432 4678877 89999433221 2
Q ss_pred CCccchhHHHHHHHHhh
Q 011833 457 LAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 457 ~~~~~v~~~i~~fL~~~ 473 (476)
+..+++++.|.+||+++
T Consensus 291 ~~~~~~~~~i~~fl~~~ 307 (322)
T 3k6k_A 291 NAADISIKEICHWISAR 307 (322)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 34578999999999876
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.3e-17 Score=181.70 Aligned_cols=249 Identities=14% Similarity=0.035 Sum_probs=161.5
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCC-CCCCCCcEEEecCCCCCcceeecCCCCCHH-HHHHhCCCcEEEecCCCCCCcccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPA-APQRNHPLLLLSGIGTNAIGYDLSPEYSFA-RYMSGQGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~-~~~~~~~VlllHG~~~~~~~~~~~~~~~l~-~~L~~~Gy~V~~~D~rG~G~S~~~ 143 (476)
+...+. +.||..+.++.+.|... ..++.|+||++||.......+.. .... +.|+++||.|+++|+||+|.+...
T Consensus 450 e~v~~~-s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~---~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~ 525 (711)
T 4hvt_A 450 EQKEAT-SFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYF---SRIKNEVWVKNAGVSVLANIRGGGEFGPE 525 (711)
T ss_dssp EEEEEE-CTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCC---CHHHHHHTGGGTCEEEEECCTTSSTTCHH
T ss_pred EEEEEE-CCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcc---cHHHHHHHHHCCCEEEEEeCCCCCCcchh
Confidence 344454 67999999999988653 23467999999998665544310 2223 478899999999999999876321
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
- .... .
T Consensus 526 ~----------------------~~~~-----------------------------------------~----------- 531 (711)
T 4hvt_A 526 W----------------------HKSA-----------------------------------------Q----------- 531 (711)
T ss_dssp H----------------------HHTT-----------------------------------------S-----------
T ss_pred H----------------------HHhh-----------------------------------------h-----------
Confidence 1 0000 0
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHH
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLR 303 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~ 303 (476)
..+.....+|+.++++++.++...+.+++.++|||+||.+++.++.++| .+++++|+.++..++.....
T Consensus 532 ---~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~p-----d~f~a~V~~~pv~D~~~~~~--- 600 (711)
T 4hvt_A 532 ---GIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRP-----ELFGAVACEVPILDMIRYKE--- 600 (711)
T ss_dssp ---GGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCG-----GGCSEEEEESCCCCTTTGGG---
T ss_pred ---hccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCc-----CceEEEEEeCCccchhhhhc---
Confidence 0001112479999999998886555579999999999999999999887 78999999998876443100
Q ss_pred HhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHh
Q 011833 304 LLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQE 383 (476)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (476)
. ... ..|... ++.+ .+++..+.+..
T Consensus 601 ----------------------------~-~~~---~~~~~~-~G~p--~~~~~~~~l~~-------------------- 625 (711)
T 4hvt_A 601 ----------------------------F-GAG---HSWVTE-YGDP--EIPNDLLHIKK-------------------- 625 (711)
T ss_dssp ----------------------------S-TTG---GGGHHH-HCCT--TSHHHHHHHHH--------------------
T ss_pred ----------------------------c-ccc---hHHHHH-hCCC--cCHHHHHHHHH--------------------
Confidence 0 000 011111 1111 11221111110
Q ss_pred CCccccCCcccccccCCCCcc--cEEEEeeCCCCcCCHHHHHHHHHhc-CCC--ceeEEEecCCCCCCCcccccccccCC
Q 011833 384 GGLCDRSGTFFYKDHIGKTNV--PVLALAADQDLICPTEAVYETVKLI-PEH--LVSFKVFGEPRGPHYAHYDLVGSRLA 458 (476)
Q Consensus 384 ~~~~~~~g~~~~~~~l~~i~v--PvLii~G~~D~~vp~~~~~~~~~~l-~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~ 458 (476)
......+.++++ |+|+++|++|..||+..+.++++.+ ... .+.+.++ ++.||... .....
T Consensus 626 ---------~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~-----p~~gHg~~-~~~~~ 690 (711)
T 4hvt_A 626 ---------YAPLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLES-----KDSGHGSG-SDLKE 690 (711)
T ss_dssp ---------HCGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEE-----SSCCSSSC-SSHHH
T ss_pred ---------cCHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEE-----CCCCCcCc-CCcch
Confidence 011135667777 9999999999999999999999988 543 3567776 89999421 11222
Q ss_pred ccchhHHHHHHHHhh
Q 011833 459 AYQVYPCIIEFLTRH 473 (476)
Q Consensus 459 ~~~v~~~i~~fL~~~ 473 (476)
....+..+.+||.++
T Consensus 691 ~~~~~~~i~~FL~~~ 705 (711)
T 4hvt_A 691 SANYFINLYTFFANA 705 (711)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 345667888999876
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=8.9e-18 Score=166.91 Aligned_cols=132 Identities=13% Similarity=0.106 Sum_probs=95.9
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCC---CCcceeecCCCCCHHHHHH-hCCCcEEEecCCCCCCcc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIG---TNAIGYDLSPEYSFARYMS-GQGFDTWILEVRGAGLSA 141 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~~~L~-~~Gy~V~~~D~rG~G~S~ 141 (476)
+...+. ..+| .+.++.| +. .++.|+||++||++ ++...| ..+.+.|+ +.||.|+++|+||+|.|.
T Consensus 57 ~~~~i~-~~~g-~i~~~~y-~~---~~~~p~vv~~HGgg~~~g~~~~~-----~~~~~~la~~~g~~Vv~~dyrg~g~~~ 125 (311)
T 1jji_A 57 EDRTIK-GRNG-DIRVRVY-QQ---KPDSPVLVYYHGGGFVICSIESH-----DALCRRIARLSNSTVVSVDYRLAPEHK 125 (311)
T ss_dssp EEEEEE-ETTE-EEEEEEE-ES---SSSEEEEEEECCSTTTSCCTGGG-----HHHHHHHHHHHTSEEEEEECCCTTTSC
T ss_pred EEEEec-CCCC-cEEEEEE-cC---CCCceEEEEECCcccccCChhHh-----HHHHHHHHHHhCCEEEEecCCCCCCCC
Confidence 344454 4566 7888777 32 23568999999998 777777 47888898 679999999999999874
Q ss_pred cccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhc
Q 011833 142 HRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDL 221 (476)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (476)
.+..
T Consensus 126 ~p~~---------------------------------------------------------------------------- 129 (311)
T 1jji_A 126 FPAA---------------------------------------------------------------------------- 129 (311)
T ss_dssp TTHH----------------------------------------------------------------------------
T ss_pred CCCc----------------------------------------------------------------------------
Confidence 3221
Q ss_pred ccccCCCchhhhhccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC
Q 011833 222 IVKNDWDFDHYLEEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 222 ~~~~~~~~~~~~~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~ 297 (476)
.+|+.++++++.+.. +.+.++++++|||+||.+++.++.++|-.+ ..+++++|+++|..+...
T Consensus 130 ------------~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~-~~~~~~~vl~~p~~~~~~ 195 (311)
T 1jji_A 130 ------------VYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSG-EDFIKHQILIYPVVNFVA 195 (311)
T ss_dssp ------------HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTT-CCCEEEEEEESCCCCSSS
T ss_pred ------------HHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcC-CCCceEEEEeCCccCCCC
Confidence 256777777776542 333348999999999999999988765111 135999999999876543
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.3e-17 Score=181.83 Aligned_cols=250 Identities=15% Similarity=0.150 Sum_probs=157.3
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCC-CCCCCCcEEEecCCCCCcc--eeecCCCCCHHHHHHhCCCcEEEecCCCCCCccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPA-APQRNHPLLLLSGIGTNAI--GYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~-~~~~~~~VlllHG~~~~~~--~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~ 142 (476)
+...+. ..||..+.++.+.|... ..++.|+||++||...... .| ......|+++||.|+++|+||+|.+..
T Consensus 481 ~~~~~~-s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~RG~g~~G~ 554 (751)
T 2xe4_A 481 ERRFAT-APDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQF-----SIQHLPYCDRGMIFAIAHIRGGSELGR 554 (751)
T ss_dssp EEEEEE-CTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCC-----CGGGHHHHTTTCEEEEECCTTSCTTCT
T ss_pred EEEEEE-CCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcc-----hHHHHHHHhCCcEEEEEeeCCCCCcCc
Confidence 444454 57999999988877543 1345789999999876554 34 356678889999999999999987532
Q ss_pred ccccCccccccccccccCCCcccccc-cchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRE-SQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDL 221 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (476)
.- .. ..
T Consensus 555 ~~----------------------~~~~~--------------------------------------------------- 561 (751)
T 2xe4_A 555 AW----------------------YEIGA--------------------------------------------------- 561 (751)
T ss_dssp HH----------------------HHTTS---------------------------------------------------
T ss_pred ch----------------------hhccc---------------------------------------------------
Confidence 10 00 00
Q ss_pred ccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhh
Q 011833 222 IVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSL 301 (476)
Q Consensus 222 ~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~ 301 (476)
...+.....+|+.++++++.++...+.++++++|+|+||.+++.++.++| .+++++|+.++..++...
T Consensus 562 ----~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p-----~~~~a~v~~~~~~d~~~~--- 629 (751)
T 2xe4_A 562 ----KYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRP-----DLFKVALAGVPFVDVMTT--- 629 (751)
T ss_dssp ----SGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCG-----GGCSEEEEESCCCCHHHH---
T ss_pred ----cccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCc-----hheeEEEEeCCcchHHhh---
Confidence 00011122478899999998875445569999999999999999999887 789999999887653210
Q ss_pred HHHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHH
Q 011833 302 LRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVF 381 (476)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (476)
+.. ..++. ....| ...+.+ .+++.+..+.
T Consensus 630 ---~~~----------~~~~~---------------~~~~~--~~~g~p--~~~~~~~~~~------------------- 658 (751)
T 2xe4_A 630 ---MCD----------PSIPL---------------TTGEW--EEWGNP--NEYKYYDYML------------------- 658 (751)
T ss_dssp ---HTC----------TTSTT---------------HHHHT--TTTCCT--TSHHHHHHHH-------------------
T ss_pred ---hcc----------cCccc---------------chhhH--HHcCCC--CCHHHHHHHH-------------------
Confidence 000 00000 00000 000111 1122111110
Q ss_pred HhCCccccCCcccccccCCCCccc-EEEEeeCCCCcCCHHHHHHHHHhcCCC-----ceeEEEecCCCCCCCcccccccc
Q 011833 382 QEGGLCDRSGTFFYKDHIGKTNVP-VLALAADQDLICPTEAVYETVKLIPEH-----LVSFKVFGEPRGPHYAHYDLVGS 455 (476)
Q Consensus 382 ~~~~~~~~~g~~~~~~~l~~i~vP-vLii~G~~D~~vp~~~~~~~~~~l~~~-----~~~~~v~~~~~~~~~gH~~~~~~ 455 (476)
... ....+.++++| +|+++|++|..||++.+.++++.++.. .+.+.++ +++||.... .
T Consensus 659 ~~s----------p~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~-----~~~gH~~~~-~ 722 (751)
T 2xe4_A 659 SYS----------PMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNID-----MESGHFSAK-D 722 (751)
T ss_dssp HHC----------TGGGCCSSCCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEE-----TTCCSSCCS-S
T ss_pred hcC----------hhhhhccCCCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEEC-----CCCCCCCcC-C
Confidence 000 11356678997 999999999999999999998887643 2345555 899994321 1
Q ss_pred cCCccchhHHHHHHHHhh
Q 011833 456 RLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 456 ~~~~~~v~~~i~~fL~~~ 473 (476)
.......+..+.+||.++
T Consensus 723 ~~~~~~~~~~~~~Fl~~~ 740 (751)
T 2xe4_A 723 RYKFWKESAIQQAFVCKH 740 (751)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 111234556789999876
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-17 Score=183.18 Aligned_cols=249 Identities=14% Similarity=0.093 Sum_probs=156.9
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCC-CCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAA-PQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~-~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
+..++. ..||..+.++.+.|.... .++.|+||++||.......+. .......|+++||.|+++|+||+|.+...
T Consensus 426 ~~~~~~-~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~---~~~~~~~l~~~G~~v~~~d~RG~g~~g~~- 500 (693)
T 3iuj_A 426 EQRFYQ-SKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPS---FSVSVANWLDLGGVYAVANLRGGGEYGQA- 500 (693)
T ss_dssp EEEEEE-CTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCC---CCHHHHHHHHTTCEEEEECCTTSSTTCHH-
T ss_pred EEEEEe-cCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCc---cCHHHHHHHHCCCEEEEEeCCCCCccCHH-
Confidence 444454 579999999999886532 346799999999866543331 13456788899999999999999865321
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
|.... .
T Consensus 501 ---------------------~~~~~-----------------------------------------~------------ 506 (693)
T 3iuj_A 501 ---------------------WHLAG-----------------------------------------T------------ 506 (693)
T ss_dssp ---------------------HHHTT-----------------------------------------S------------
T ss_pred ---------------------HHHhh-----------------------------------------h------------
Confidence 10000 0
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHH
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRL 304 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~ 304 (476)
........+|+.+++++|.++...+.++++++|||+||.+++.++.++| .+++++|+.++..++.....
T Consensus 507 --~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p-----~~~~a~v~~~~~~d~~~~~~---- 575 (693)
T 3iuj_A 507 --QQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRP-----DLMRVALPAVGVLDMLRYHT---- 575 (693)
T ss_dssp --GGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCT-----TSCSEEEEESCCCCTTTGGG----
T ss_pred --hhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCc-----cceeEEEecCCcchhhhhcc----
Confidence 0001112379999999998875455569999999999999999999988 78999999998876443210
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHH-HHHHhhhccCCCCHHHHHHHHHHHHh
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPEL-FEKLIFSNFGNIPTKLISQLTTVFQE 383 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (476)
+ .... .|... .+.+ .+++. ++.+. .
T Consensus 576 ~----------------------------~~~~---~~~~~-~g~p--~~~~~~~~~~~-------------~------- 601 (693)
T 3iuj_A 576 F----------------------------TAGT---GWAYD-YGTS--ADSEAMFDYLK-------------G------- 601 (693)
T ss_dssp S----------------------------GGGG---GCHHH-HCCT--TSCHHHHHHHH-------------H-------
T ss_pred C----------------------------CCch---hHHHH-cCCc--cCHHHHHHHHH-------------h-------
Confidence 0 0000 00000 1111 01111 11110 0
Q ss_pred CCccccCCcccccccCCC-Cccc-EEEEeeCCCCcCCHHHHHHHHHhcCCC-----ceeEEEecCCCCCCCccccccccc
Q 011833 384 GGLCDRSGTFFYKDHIGK-TNVP-VLALAADQDLICPTEAVYETVKLIPEH-----LVSFKVFGEPRGPHYAHYDLVGSR 456 (476)
Q Consensus 384 ~~~~~~~g~~~~~~~l~~-i~vP-vLii~G~~D~~vp~~~~~~~~~~l~~~-----~~~~~v~~~~~~~~~gH~~~~~~~ 456 (476)
......+.+ +++| +|+++|++|..||+..+.++++.+... .+.++++ +++||... ...
T Consensus 602 ---------~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~gH~~~-~~~ 666 (693)
T 3iuj_A 602 ---------YSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIE-----TNAGHGAG-TPV 666 (693)
T ss_dssp ---------HCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEE-----C--------CHH
T ss_pred ---------cCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEe-----CCCCCCCc-ccH
Confidence 000124566 7887 999999999999999999998887543 4567776 89999421 111
Q ss_pred CCccchhHHHHHHHHhh
Q 011833 457 LAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 457 ~~~~~v~~~i~~fL~~~ 473 (476)
+...+.+..+.+||.++
T Consensus 667 ~~~~~~~~~~~~fl~~~ 683 (693)
T 3iuj_A 667 AKLIEQSADIYAFTLYE 683 (693)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34567888999999876
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.6e-18 Score=164.35 Aligned_cols=224 Identities=17% Similarity=0.261 Sum_probs=143.7
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCC---CcEEEecCCCCCCcccccccCccccccccccccCCCccccccc
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQG---FDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRES 169 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~G---y~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 169 (476)
.++||||+||++++...| ..+++.|+++| +.|+.+|++++|.++-...+. .
T Consensus 3 ~~~pvv~iHG~~~~~~~~-----~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~--------------------~- 56 (250)
T 3lp5_A 3 RMAPVIMVPGSSASQNRF-----DSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIA--------------------A- 56 (250)
T ss_dssp SCCCEEEECCCGGGHHHH-----HHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCC--------------------T-
T ss_pred CCCCEEEECCCCCCHHHH-----HHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecC--------------------C-
Confidence 467999999999999999 58999999876 899999998888642111000 0
Q ss_pred chhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC-CchhhhhccHHHHHHHHHHHh
Q 011833 170 QSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW-DFDHYLEEDVPAVMEYIRTLS 248 (476)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~a~i~~l~~~~ 248 (476)
..+.|-..- .|..+ ...| ++++++ +++.++++.+.+..
T Consensus 57 -------------------------~~~~P~i~v---~f~~n------------~~~~~~~~~~a-~~l~~~~~~l~~~~ 95 (250)
T 3lp5_A 57 -------------------------NDNEPFIVI---GFANN------------RDGKANIDKQA-VWLNTAFKALVKTY 95 (250)
T ss_dssp -------------------------TCSSCEEEE---EESCC------------CCSHHHHHHHH-HHHHHHHHHHHTTS
T ss_pred -------------------------CCcCCeEEE---EeccC------------CCcccCHHHHH-HHHHHHHHHHHHHc
Confidence 000110000 00000 0001 344445 88999999998887
Q ss_pred CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHh
Q 011833 249 KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAA 328 (476)
Q Consensus 249 ~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (476)
+.. ++++|||||||.+++.++..++......+|+++|+++++..-....
T Consensus 96 ~~~--~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~----------------------------- 144 (250)
T 3lp5_A 96 HFN--HFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS----------------------------- 144 (250)
T ss_dssp CCS--EEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC-----------------------------
T ss_pred CCC--CeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc-----------------------------
Confidence 664 8999999999999999998874111136899999999886422110
Q ss_pred hccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEE
Q 011833 329 IHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLA 408 (476)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLi 408 (476)
+... ...++.+. . ....+.+ ++|+++
T Consensus 145 ---------------------~~~~-~~~~~~l~-------------------~------------~~~~lp~-~vpvl~ 170 (250)
T 3lp5_A 145 ---------------------TTAK-TSMFKELY-------------------R------------YRTGLPE-SLTVYS 170 (250)
T ss_dssp ---------------------SSCC-CHHHHHHH-------------------H------------TGGGSCT-TCEEEE
T ss_pred ---------------------cccc-CHHHHHHH-------------------h------------ccccCCC-CceEEE
Confidence 0000 01111110 0 0123333 799999
Q ss_pred EeeC----CCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 409 LAAD----QDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 409 i~G~----~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
|+|+ .|.++|.+.+..+...+++....+..+. -.+++++|..+ .+.+ +|.+.|.+||.+.
T Consensus 171 I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~-v~g~~a~H~~l---~e~~-~v~~~I~~FL~~~ 234 (250)
T 3lp5_A 171 IAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEIT-VTGANTAHSDL---PQNK-QIVSLIRQYLLAE 234 (250)
T ss_dssp EECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEE-CTTTTBSSCCH---HHHH-HHHHHHHHHTSCC
T ss_pred EEecCCCCCCceeeHHHHHHHHHHhcccccceEEEE-EeCCCCchhcc---hhCH-HHHHHHHHHHhcc
Confidence 9999 9999999999888888875323333221 13467889776 4444 8999999999754
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=9.3e-18 Score=161.97 Aligned_cols=155 Identities=15% Similarity=0.153 Sum_probs=98.3
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
..+|..+.++.|.|.....++.|+||++||++.+...|... ..+.+.+.+.||.|+++|.||+|.|.......
T Consensus 23 ~~~g~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~--~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~----- 95 (278)
T 3e4d_A 23 ETLKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVMEK--GEYRRMASELGLVVVCPDTSPRGNDVPDELTN----- 95 (278)
T ss_dssp TTTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHH--SCCHHHHHHHTCEEEECCSSCCSTTSCCCTTC-----
T ss_pred cccCCcceEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhc--ccHHHHHhhCCeEEEecCCcccCccccccccc-----
Confidence 56789999999988653234568999999999988777310 12455566679999999999999985432100
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
-..|.+..+.... . ..| + ...+.+.++
T Consensus 96 -----~~~g~~~~~~~~~----------------------~---~~~---------------~--------~~~~~~~~~ 122 (278)
T 3e4d_A 96 -----WQMGKGAGFYLDA----------------------T---EEP---------------W--------SEHYQMYSY 122 (278)
T ss_dssp -----TTSBTTBCTTSBC----------------------C---STT---------------T--------TTTCBHHHH
T ss_pred -----ccccCCccccccC----------------------C---cCc---------------c--------cchhhHHHH
Confidence 0011111111000 0 000 0 001223333
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
+.+| +++++.+..+.+.++++++||||||.+++.++.++| ..++++++++|..+.
T Consensus 123 ~~~~---~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p-----~~~~~~v~~~~~~~~ 177 (278)
T 3e4d_A 123 VTEE---LPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNP-----ERFKSCSAFAPIVAP 177 (278)
T ss_dssp HHTH---HHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCT-----TTCSCEEEESCCSCG
T ss_pred HHHH---HHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCC-----cccceEEEeCCcccc
Confidence 3333 455555555543358999999999999999999987 789999999987653
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.74 E-value=3e-17 Score=164.20 Aligned_cols=121 Identities=11% Similarity=0.082 Sum_probs=86.5
Q ss_pred CceEEEEEEEcCCCCCCCCCCcEEEecCCC---CCcceeecCCCCCHHHHHH-hCCCcEEEecCCCCCCcccccccCccc
Q 011833 75 SDWRLALWRYLPSPAAPQRNHPLLLLSGIG---TNAIGYDLSPEYSFARYMS-GQGFDTWILEVRGAGLSAHRVEFGEDS 150 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~~~L~-~~Gy~V~~~D~rG~G~S~~~~~~~~~~ 150 (476)
+|..+ +.|.|.. ..+|+||++||.+ ++...| ..++..|+ +.||.|+++|+||.+....
T Consensus 82 ~~~~~--~~~~p~~---~~~p~vv~lHGgg~~~~~~~~~-----~~~~~~la~~~g~~vi~~D~r~~~~~~~-------- 143 (326)
T 3d7r_A 82 DDMQV--FRFNFRH---QIDKKILYIHGGFNALQPSPFH-----WRLLDKITLSTLYEVVLPIYPKTPEFHI-------- 143 (326)
T ss_dssp TTEEE--EEEESTT---CCSSEEEEECCSTTTSCCCHHH-----HHHHHHHHHHHCSEEEEECCCCTTTSCH--------
T ss_pred CCEEE--EEEeeCC---CCCeEEEEECCCcccCCCCHHH-----HHHHHHHHHHhCCEEEEEeCCCCCCCCc--------
Confidence 66544 4455653 3468999999954 355556 36777887 4599999999999764211
Q ss_pred cccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCch
Q 011833 151 MITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFD 230 (476)
Q Consensus 151 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (476)
.
T Consensus 144 -------------------------------------------------------------------------------~ 144 (326)
T 3d7r_A 144 -------------------------------------------------------------------------------D 144 (326)
T ss_dssp -------------------------------------------------------------------------------H
T ss_pred -------------------------------------------------------------------------------h
Confidence 1
Q ss_pred hhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 231 HYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 231 ~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
. ..+|+.++++++.+..+. ++++++||||||.+++.++.++|-.+ ...++++|+++|..+..
T Consensus 145 ~-~~~d~~~~~~~l~~~~~~--~~i~l~G~S~GG~lAl~~a~~~~~~~-~~~v~~lvl~~p~~~~~ 206 (326)
T 3d7r_A 145 D-TFQAIQRVYDQLVSEVGH--QNVVVMGDGSGGALALSFVQSLLDNQ-QPLPNKLYLISPILDAT 206 (326)
T ss_dssp H-HHHHHHHHHHHHHHHHCG--GGEEEEEETHHHHHHHHHHHHHHHTT-CCCCSEEEEESCCCCTT
T ss_pred H-HHHHHHHHHHHHHhccCC--CcEEEEEECHHHHHHHHHHHHHHhcC-CCCCCeEEEECcccccC
Confidence 1 136888888888877544 48999999999999999998876111 13499999999976543
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.8e-18 Score=162.04 Aligned_cols=64 Identities=20% Similarity=0.217 Sum_probs=49.4
Q ss_pred CCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 399 IGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 399 l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
+.++++|+|+|+|++|.+++ .....+.+.+++. .++++ + .||+.+ .+.++++.+.|.+||+++.
T Consensus 175 l~~i~~P~lvi~G~~D~~~~-~~~~~~~~~~~~~--~~~~~-----~-~gH~~~---~e~p~~~~~~i~~fl~~~~ 238 (242)
T 2k2q_B 175 LAQIQSPVHVFNGLDDKKCI-RDAEGWKKWAKDI--TFHQF-----D-GGHMFL---LSQTEEVAERIFAILNQHP 238 (242)
T ss_dssp CTTCCCSEEEEEECSSCCHH-HHHHHHHTTCCCS--EEEEE-----E-CCCSHH---HHHCHHHHHHHHHHHHTTT
T ss_pred CCccCCCEEEEeeCCCCcCH-HHHHHHHHHhcCC--eEEEE-----e-CCceeE---cCCHHHHHHHHHHHhhccC
Confidence 67899999999999999875 4456666666654 46665 5 489544 6778999999999998753
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.7e-17 Score=163.38 Aligned_cols=133 Identities=13% Similarity=0.007 Sum_probs=98.3
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCC---CCcceeecCCCCCHHHHHH-hCCCcEEEecCCCCCCcc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIG---TNAIGYDLSPEYSFARYMS-GQGFDTWILEVRGAGLSA 141 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~~~L~-~~Gy~V~~~D~rG~G~S~ 141 (476)
+...+. ..||..+.++.|.|.. ++.|+||++||.+ ++...| ..+...|+ +.||.|+++|+|+.+...
T Consensus 61 ~~~~i~-~~~G~~i~~~~~~P~~---~~~p~vv~~HGgG~~~g~~~~~-----~~~~~~la~~~g~~vv~~dyr~~p~~~ 131 (317)
T 3qh4_A 61 ADDVVT-GEAGRPVPVRIYRAAP---TPAPVVVYCHAGGFALGNLDTD-----HRQCLELARRARCAVVSVDYRLAPEHP 131 (317)
T ss_dssp EEEEEE-CTTSCEEEEEEEECSC---SSEEEEEEECCSTTTSCCTTTT-----HHHHHHHHHHHTSEEEEECCCCTTTSC
T ss_pred EEEEec-CCCCCeEEEEEEecCC---CCCcEEEEECCCcCccCChHHH-----HHHHHHHHHHcCCEEEEecCCCCCCCC
Confidence 344555 5788899999998864 3578999999876 444445 36777787 559999999999876542
Q ss_pred cccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhc
Q 011833 142 HRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDL 221 (476)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (476)
.+.
T Consensus 132 ~p~----------------------------------------------------------------------------- 134 (317)
T 3qh4_A 132 YPA----------------------------------------------------------------------------- 134 (317)
T ss_dssp TTH-----------------------------------------------------------------------------
T ss_pred Cch-----------------------------------------------------------------------------
Confidence 211
Q ss_pred ccccCCCchhhhhccHHHHHHHHHHH---hCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 222 IVKNDWDFDHYLEEDVPAVMEYIRTL---SKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 222 ~~~~~~~~~~~~~~Dl~a~i~~l~~~---~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
..+|+.++++++.++ .+.+.++++++|||+||.+++.++.+++-. ....++++++++|..+..
T Consensus 135 -----------~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~-~~~~~~~~vl~~p~~~~~ 200 (317)
T 3qh4_A 135 -----------ALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADG-SLPPVIFQLLHQPVLDDR 200 (317)
T ss_dssp -----------HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT-SSCCCCEEEEESCCCCSS
T ss_pred -----------HHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhc-CCCCeeEEEEECceecCC
Confidence 136888888988875 444445899999999999999998875511 124699999999987755
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.74 E-value=6.2e-17 Score=162.04 Aligned_cols=122 Identities=22% Similarity=0.111 Sum_probs=90.1
Q ss_pred EEEEEEcCCCCCCCCCCcEEEecCCC---CCcceeecCCCCCHHHHHHh-CCCcEEEecCCCCCCcccccccCccccccc
Q 011833 79 LALWRYLPSPAAPQRNHPLLLLSGIG---TNAIGYDLSPEYSFARYMSG-QGFDTWILEVRGAGLSAHRVEFGEDSMITS 154 (476)
Q Consensus 79 L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~~~L~~-~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~ 154 (476)
+.++.|.|... ++.|+||++||.+ ++...| ..+...|+. .||.|+++|+|+.+....+
T Consensus 67 i~~~~~~p~~~--~~~p~vv~~HGGg~~~g~~~~~-----~~~~~~la~~~g~~vv~~dyr~~p~~~~~----------- 128 (322)
T 3fak_A 67 CAAEWVRAPGC--QAGKAILYLHGGGYVMGSINTH-----RSMVGEISRASQAAALLLDYRLAPEHPFP----------- 128 (322)
T ss_dssp EEEEEEECTTC--CTTCEEEEECCSTTTSCCHHHH-----HHHHHHHHHHHTSEEEEECCCCTTTSCTT-----------
T ss_pred eEEEEEeCCCC--CCccEEEEEcCCccccCChHHH-----HHHHHHHHHhcCCEEEEEeCCCCCCCCCC-----------
Confidence 56666767543 4578999999965 444455 366777776 5999999999987653211
Q ss_pred cccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhh
Q 011833 155 ANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLE 234 (476)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (476)
. ..
T Consensus 129 ----------------------------------------------------------------------------~-~~ 131 (322)
T 3fak_A 129 ----------------------------------------------------------------------------A-AV 131 (322)
T ss_dssp ----------------------------------------------------------------------------H-HH
T ss_pred ----------------------------------------------------------------------------c-HH
Confidence 1 13
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~ 297 (476)
+|+.++++++.++ +.+.++++++|||+||.+++.++.+.+-.+ ...++++|+++|..+...
T Consensus 132 ~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~-~~~~~~~vl~~p~~~~~~ 192 (322)
T 3fak_A 132 EDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQG-LPMPASAIPISPWADMTC 192 (322)
T ss_dssp HHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTT-CCCCSEEEEESCCCCTTC
T ss_pred HHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcC-CCCceEEEEECCEecCcC
Confidence 7899999999888 555569999999999999999988765111 135999999999877554
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-17 Score=156.82 Aligned_cols=201 Identities=16% Similarity=0.188 Sum_probs=132.0
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhC-----CCcEEEecCCCCCCcccccccCccccccccccccCCCccccc
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQ-----GFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSR 167 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~-----Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (476)
.+|+||++||++++...| ..++..|.++ ||.|+++|.++++.+.... +.+..|.
T Consensus 22 ~~p~vv~lHG~g~~~~~~-----~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~----------------~~~~~w~ 80 (239)
T 3u0v_A 22 HSASLIFLHGSGDSGQGL-----RMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKG----------------GISNVWF 80 (239)
T ss_dssp CCEEEEEECCTTCCHHHH-----HHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTT----------------CEEECSS
T ss_pred CCcEEEEEecCCCchhhH-----HHHHHHHhhcccCCCceEEEeCCCCccccccCCC----------------Cccccce
Confidence 578999999999999888 5788888765 6899999998765432210 0011111
Q ss_pred ccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHH
Q 011833 168 ESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTL 247 (476)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~ 247 (476)
+.. +.+.+.+. ...+++++. +++.++++.+.+
T Consensus 81 ~~~----------------------~~~~~~~~------------------------~~~~~~~~~-~~l~~~~~~~~~- 112 (239)
T 3u0v_A 81 DRF----------------------KITNDCPE------------------------HLESIDVMC-QVLTDLIDEEVK- 112 (239)
T ss_dssp CCS----------------------SSSSSSCC------------------------CHHHHHHHH-HHHHHHHHHHHH-
T ss_pred ecc----------------------CCCccccc------------------------chhhHHHHH-HHHHHHHHHHHH-
Confidence 100 00000000 001122323 566666666543
Q ss_pred hCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHH
Q 011833 248 SKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLA 327 (476)
Q Consensus 248 ~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (476)
.+.+.++++++||||||.+++.++.++| .+++++|++++.......
T Consensus 113 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-----~~~~~~v~~~~~~~~~~~----------------------------- 158 (239)
T 3u0v_A 113 SGIKKNRILIGGFSMGGCMAMHLAYRNH-----QDVAGVFALSSFLNKASA----------------------------- 158 (239)
T ss_dssp TTCCGGGEEEEEETHHHHHHHHHHHHHC-----TTSSEEEEESCCCCTTCH-----------------------------
T ss_pred hCCCcccEEEEEEChhhHHHHHHHHhCc-----cccceEEEecCCCCchhH-----------------------------
Confidence 3444569999999999999999999887 789999999876532210
Q ss_pred hhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCccc-E
Q 011833 328 AIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVP-V 406 (476)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vP-v 406 (476)
....+ .....++| +
T Consensus 159 -----------------------------~~~~~------------------------------------~~~~~~~pp~ 173 (239)
T 3u0v_A 159 -----------------------------VYQAL------------------------------------QKSNGVLPEL 173 (239)
T ss_dssp -----------------------------HHHHH------------------------------------HHCCSCCCCE
T ss_pred -----------------------------HHHHH------------------------------------HhhccCCCCE
Confidence 00000 01123566 9
Q ss_pred EEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 407 LALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 407 Lii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
|+++|++|.++|.+.++++.+.++.. .++++++ ++++|.-. .+..+.+.+||+++
T Consensus 174 li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~-----~g~~H~~~-------~~~~~~~~~~l~~~ 230 (239)
T 3u0v_A 174 FQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSF-----PNVYHELS-------KTELDILKLWILTK 230 (239)
T ss_dssp EEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEE-----TTCCSSCC-------HHHHHHHHHHHHHH
T ss_pred EEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEe-----CCCCCcCC-------HHHHHHHHHHHHHh
Confidence 99999999999999999988888632 4677777 89999322 56688899999875
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.5e-17 Score=158.78 Aligned_cols=156 Identities=15% Similarity=0.179 Sum_probs=96.8
Q ss_pred EeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecC--CCCCCcccccccC
Q 011833 70 VAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEV--RGAGLSAHRVEFG 147 (476)
Q Consensus 70 v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~--rG~G~S~~~~~~~ 147 (476)
+....+|..+.++.|.|.....++.|+||++||++.+...|.. ...+.+.++++||.|+++|+ ||+|.+......+
T Consensus 21 ~~s~~~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~--~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~ 98 (282)
T 3fcx_A 21 HDSVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFIS--KSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWD 98 (282)
T ss_dssp EEETTTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHH--HSCCHHHHHHHTCEEEEECSCSSCCCC--------
T ss_pred EEchhcCCeeEEEEEcCCCCCCCCCCEEEEEcCCCCCccchhh--cchHHHHhhcCCeEEEEeccccCcccccccccccc
Confidence 3335678899999998875333457899999999998877731 01236788889999999999 8887664322100
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
.|.+..+.... + ...|.. .+
T Consensus 99 ------------~g~~~~~~~~~----------------------------~------------~~~~~~--------~~ 118 (282)
T 3fcx_A 99 ------------FGTGAGFYVDA----------------------------T------------EDPWKT--------NY 118 (282)
T ss_dssp ------------CCCCCCTTCBC----------------------------C------------STTHHH--------HC
T ss_pred ------------ccCCccccccc----------------------------C------------cccccc--------hh
Confidence 11111110000 0 000000 01
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
.+.+ .++.++++++.+..+.+.++++++||||||.+++.++.++| ..+++++++++..+.
T Consensus 119 ~~~~---~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p-----~~~~~~v~~s~~~~~ 178 (282)
T 3fcx_A 119 RMYS---YVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNP-----GKYKSVSAFAPICNP 178 (282)
T ss_dssp BHHH---HHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTST-----TTSSCEEEESCCCCG
T ss_pred hHHH---HHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCc-----ccceEEEEeCCccCc
Confidence 1111 22334555665555544468999999999999999999987 789999999987653
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-16 Score=163.76 Aligned_cols=62 Identities=11% Similarity=0.111 Sum_probs=48.6
Q ss_pred hccHHHHHHHHHHHh----CCCCC-cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC
Q 011833 234 EEDVPAVMEYIRTLS----KPKDG-KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~----~~~~~-ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~ 297 (476)
.+|+.++++++++.. +.+.+ +++++|||+||.+++.++.+.+-. ..+++++|+++|..+...
T Consensus 165 ~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~--~~~~~g~vl~~p~~~~~~ 231 (365)
T 3ebl_A 165 YDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADE--GVKVCGNILLNAMFGGTE 231 (365)
T ss_dssp HHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHHT--TCCCCEEEEESCCCCCSS
T ss_pred HHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHhc--CCceeeEEEEccccCCCc
Confidence 379999999998543 44556 899999999999999999876511 147999999999876543
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.72 E-value=3e-17 Score=159.42 Aligned_cols=67 Identities=10% Similarity=0.040 Sum_probs=50.4
Q ss_pred CCCCcccEE-EEeeCC---CCcC--------------CHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCcc
Q 011833 399 IGKTNVPVL-ALAADQ---DLIC--------------PTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAY 460 (476)
Q Consensus 399 l~~i~vPvL-ii~G~~---D~~v--------------p~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~ 460 (476)
..++++|++ +++|++ |..+ +......+.+..+....+++++ +++||+.++ ..+.++
T Consensus 181 ~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~i-----~gagH~~~~-~~e~~~ 254 (265)
T 3ils_A 181 LHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPGASFDIVRA-----DGANHFTLM-QKEHVS 254 (265)
T ss_dssp CCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHSTTCCEEEEEE-----EEEETTGGG-STTTTH
T ss_pred CccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhCCccceeEEEc-----CCCCcceee-ChhhHH
Confidence 457899988 999999 9988 4444556666666335677777 899996543 367789
Q ss_pred chhHHHHHHHH
Q 011833 461 QVYPCIIEFLT 471 (476)
Q Consensus 461 ~v~~~i~~fL~ 471 (476)
++.+.|.+||+
T Consensus 255 ~v~~~i~~fL~ 265 (265)
T 3ils_A 255 IISDLIDRVMA 265 (265)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhC
Confidence 99999999973
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.71 E-value=2e-16 Score=158.72 Aligned_cols=220 Identities=13% Similarity=0.069 Sum_probs=131.9
Q ss_pred CCCcEEEecCC--CCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccc
Q 011833 93 RNHPLLLLSGI--GTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQ 170 (476)
Q Consensus 93 ~~~~VlllHG~--~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 170 (476)
.+++||++||+ +++...| ..++..| ..||+|+++|+||+|.|....
T Consensus 80 ~~~~lv~lhG~~~~~~~~~~-----~~~~~~L-~~~~~v~~~d~~G~G~~~~~~-------------------------- 127 (319)
T 3lcr_A 80 LGPQLILVCPTVMTTGPQVY-----SRLAEEL-DAGRRVSALVPPGFHGGQALP-------------------------- 127 (319)
T ss_dssp SSCEEEEECCSSTTCSGGGG-----HHHHHHH-CTTSEEEEEECTTSSTTCCEE--------------------------
T ss_pred CCCeEEEECCCCcCCCHHHH-----HHHHHHh-CCCceEEEeeCCCCCCCCCCC--------------------------
Confidence 46899999996 5677778 5788888 679999999999999865422
Q ss_pred hhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCC
Q 011833 171 SKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKP 250 (476)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~ 250 (476)
.++++++ +|+.+.++ +..+.
T Consensus 128 --------------------------------------------------------~~~~~~~-~~~~~~l~---~~~~~ 147 (319)
T 3lcr_A 128 --------------------------------------------------------ATLTVLV-RSLADVVQ---AEVAD 147 (319)
T ss_dssp --------------------------------------------------------SSHHHHH-HHHHHHHH---HHHTT
T ss_pred --------------------------------------------------------CCHHHHH-HHHHHHHH---HhcCC
Confidence 1233333 44444444 33332
Q ss_pred CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhc
Q 011833 251 KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIH 330 (476)
Q Consensus 251 ~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (476)
++++++||||||.+++.++.+++ ....+|+++|++++............. ...+.
T Consensus 148 --~~~~lvGhS~Gg~vA~~~A~~~~--~~~~~v~~lvl~~~~~~~~~~~~~~~~---------------------~~~~~ 202 (319)
T 3lcr_A 148 --GEFALAGHSSGGVVAYEVARELE--ARGLAPRGVVLIDSYSFDGDGGRPEEL---------------------FRSAL 202 (319)
T ss_dssp --SCEEEEEETHHHHHHHHHHHHHH--HTTCCCSCEEEESCCCCCSSCCHHHHH---------------------HHHHH
T ss_pred --CCEEEEEECHHHHHHHHHHHHHH--hcCCCccEEEEECCCCCCccchhhHHH---------------------HHHHH
Confidence 48999999999999999998862 001679999999876532221000000 00000
Q ss_pred cCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCC--HHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEE
Q 011833 331 PFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIP--TKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLA 408 (476)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLi 408 (476)
. ...... ..+ .... ...+..+...+.. +. .| ....+++|+|+
T Consensus 203 ~---------~~~~~~------------~~~-----~~~~~~~~~l~~~~~~~~~--~~------~~--~~~~i~~PvLl 246 (319)
T 3lcr_A 203 N---------ERFVEY------------LRL-----TGGGNLSQRITAQVWCLEL--LR------GW--RPEGLTAPTLY 246 (319)
T ss_dssp H---------HHHHHH------------HHH-----HCCCCHHHHHHHHHHHHHH--TT------TC--CCCCCSSCEEE
T ss_pred H---------HHHhhh------------hcc-----cCCCchhHHHHHHHHHHHH--Hh------cC--CCCCcCCCEEE
Confidence 0 000000 000 0001 1111111111110 00 01 23678999999
Q ss_pred EeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 409 LAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 409 i~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
|+|++ .+++++....+.+.++.. ..++++ ..+|+.++ ..+.++++.+.|.+||++..
T Consensus 247 i~g~~-~~~~~~~~~~~~~~~~~~-~~~~~~------~g~H~~~~-~~~~~~~va~~i~~fL~~~~ 303 (319)
T 3lcr_A 247 VRPAQ-PLVEQEKPEWRGDVLAAM-GQVVEA------PGDHFTII-EGEHVASTAHIVGDWLREAH 303 (319)
T ss_dssp EEESS-CSSSCCCTHHHHHHHHTC-SEEEEE------SSCTTGGG-STTTHHHHHHHHHHHHHHHH
T ss_pred EEeCC-CCCCcccchhhhhcCCCC-ceEEEe------CCCcHHhh-CcccHHHHHHHHHHHHHhcc
Confidence 99998 556666777788877753 456665 45886653 22478999999999998753
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.7e-17 Score=154.58 Aligned_cols=65 Identities=11% Similarity=-0.009 Sum_probs=49.9
Q ss_pred cCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC------ceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHH
Q 011833 398 HIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH------LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLT 471 (476)
Q Consensus 398 ~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~------~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~ 471 (476)
.+.++++|+|+++|++|.++|++.++++.+.+++. ...+.+ ++.||.- ..+ +.+++.|.+||+
T Consensus 167 ~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~gH~~---~~~--~~~~~~i~~fl~ 235 (243)
T 1ycd_A 167 VKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYE------HPGGHMV---PNK--KDIIRPIVEQIT 235 (243)
T ss_dssp CCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEE------ESSSSSC---CCC--HHHHHHHHHHHH
T ss_pred CcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEe------cCCCCcC---Cch--HHHHHHHHHHHH
Confidence 35668999999999999999999999999888653 233333 6789942 222 468999999998
Q ss_pred hh
Q 011833 472 RH 473 (476)
Q Consensus 472 ~~ 473 (476)
++
T Consensus 236 ~~ 237 (243)
T 1ycd_A 236 SS 237 (243)
T ss_dssp HH
T ss_pred Hh
Confidence 75
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.70 E-value=3.3e-16 Score=175.16 Aligned_cols=70 Identities=20% Similarity=0.171 Sum_probs=54.5
Q ss_pred cccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCC-CceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 396 KDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPE-HLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 396 ~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~-~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
...+.+|++|+|+++|.+|.++|++.+.++++.+++ ..+.+.+ +++||.... ...+..+.+.+++||+++
T Consensus 450 ~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~~~~~~l~i------~~~gH~~~~--~~~~~~~~~~i~~Ffd~~ 520 (763)
T 1lns_A 450 LINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFL------HRGAHIYMN--SWQSIDFSETINAYFVAK 520 (763)
T ss_dssp GGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEE------ESCSSCCCT--TBSSCCHHHHHHHHHHHH
T ss_pred hhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhccCCCeEEEE------eCCcccCcc--ccchHHHHHHHHHHHHHH
Confidence 457889999999999999999999999999999985 2233433 578895421 223467889999999876
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.70 E-value=4e-17 Score=157.89 Aligned_cols=158 Identities=18% Similarity=0.217 Sum_probs=99.4
Q ss_pred eeEeeCCCceEEEEEEEcCCCCC-CCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccccc
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAA-PQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEF 146 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~-~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~ 146 (476)
..+....+|..+.++.|.|.... .++.|+||++||++.+...|.. ...+.+.+.+.|+.|+++|.+|+|.+.....
T Consensus 20 ~~~~s~~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~~~~--~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~- 96 (280)
T 3i6y_A 20 YSHVSNTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFMQ--KAGAQRLAAELGIAIVAPDTSPRGEGVADDE- 96 (280)
T ss_dssp EEEEETTTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSHHHH--HSCCHHHHHHHTCEEEEECSSCCSTTCCCCS-
T ss_pred EEEeccccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChhHHhh--cccHHHHHhhCCeEEEEeCCcccccccCccc-
Confidence 34443568999999999887521 2456899999999988877731 0124566777899999999999887643211
Q ss_pred CccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccC
Q 011833 147 GEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKND 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
.-..|.+..+..... ..| | ...
T Consensus 97 ----------~~~~G~g~~~~~~~~-------------------------~~~---------------~--------~~~ 118 (280)
T 3i6y_A 97 ----------GYDLGQGAGFYVNAT-------------------------QAP---------------W--------NRH 118 (280)
T ss_dssp ----------STTSSTTCCTTCBCC-------------------------STT---------------G--------GGT
T ss_pred ----------ccccccCcccccccc-------------------------CCC---------------c--------cch
Confidence 000111111111100 000 0 001
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
+.+.++..+|+. +++.+.... .++++++||||||.+++.++.++| .++++++++++..+.
T Consensus 119 ~~~~~~~~~~~~---~~~~~~~~~-~~~i~l~G~S~GG~~a~~~a~~~p-----~~~~~~v~~s~~~~~ 178 (280)
T 3i6y_A 119 YQMYDYVVNELP---ELIESMFPV-SDKRAIAGHSMGGHGALTIALRNP-----ERYQSVSAFSPINNP 178 (280)
T ss_dssp CBHHHHHHTHHH---HHHHHHSSE-EEEEEEEEETHHHHHHHHHHHHCT-----TTCSCEEEESCCCCG
T ss_pred hhHHHHHHHHHH---HHHHHhCCC-CCCeEEEEECHHHHHHHHHHHhCC-----ccccEEEEeCCcccc
Confidence 223333334444 444444433 248999999999999999999988 789999999987653
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.4e-16 Score=152.78 Aligned_cols=165 Identities=17% Similarity=0.176 Sum_probs=106.5
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhh
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLL 306 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~ 306 (476)
+++++++ +|+.++++.+.+..+.. ++++|||||||.+++.++.++|-.....+|+++|+++++.......
T Consensus 71 ~~~~~~a-~~l~~~i~~l~~~~~~~--~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~------- 140 (254)
T 3ds8_A 71 ATPDDWS-KWLKIAMEDLKSRYGFT--QMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPN------- 140 (254)
T ss_dssp SCHHHHH-HHHHHHHHHHHHHHCCS--EEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHH-------
T ss_pred CCHHHHH-HHHHHHHHHHHHHhCCC--ceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccc-------
Confidence 4555556 78999999998888764 8999999999999999999988211123899999999976533210
Q ss_pred cCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCc
Q 011833 307 PLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGL 386 (476)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (476)
.....+.. ...+. . ...+ ..+..
T Consensus 141 --------------------~~~~~~~~------------~~~p~-~-~~~~----------------~~~~~------- 163 (254)
T 3ds8_A 141 --------------------DNGMDLSF------------KKLPN-S-TPQM----------------DYFIK------- 163 (254)
T ss_dssp --------------------HHCSCTTC------------SSCSS-C-CHHH----------------HHHHH-------
T ss_pred --------------------cccccccc------------ccCCc-c-hHHH----------------HHHHH-------
Confidence 00000000 00000 0 0000 00000
Q ss_pred cccCCcccccccCCCCcccEEEEeeC------CCCcCCHHHHHHHHHhcCCCcee--EEEecCCCCCCCcccccccccCC
Q 011833 387 CDRSGTFFYKDHIGKTNVPVLALAAD------QDLICPTEAVYETVKLIPEHLVS--FKVFGEPRGPHYAHYDLVGSRLA 458 (476)
Q Consensus 387 ~~~~g~~~~~~~l~~i~vPvLii~G~------~D~~vp~~~~~~~~~~l~~~~~~--~~v~~~~~~~~~gH~~~~~~~~~ 458 (476)
....+.+ ++|++.|+|+ .|.+||.+.++.+...+++.... .+++ .+++++|..+ .+.
T Consensus 164 --------~~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~---~g~~a~Hs~l---~~~ 228 (254)
T 3ds8_A 164 --------NQTEVSP-DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQ---VGEDAVHQTL---HET 228 (254)
T ss_dssp --------TGGGSCT-TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEE---ESGGGCGGGG---GGS
T ss_pred --------HHhhCCC-CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEE---eCCCCchhcc---cCC
Confidence 0112333 7999999999 99999999999998888764222 2333 3456889665 344
Q ss_pred ccchhHHHHHHHHhhc
Q 011833 459 AYQVYPCIIEFLTRHD 474 (476)
Q Consensus 459 ~~~v~~~i~~fL~~~~ 474 (476)
.++.+.|..||++..
T Consensus 229 -~~v~~~i~~fL~~~~ 243 (254)
T 3ds8_A 229 -PKSIEKTYWFLEKFK 243 (254)
T ss_dssp -HHHHHHHHHHHHTCC
T ss_pred -HHHHHHHHHHHHHhc
Confidence 469999999999864
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.6e-16 Score=150.00 Aligned_cols=140 Identities=16% Similarity=0.224 Sum_probs=94.2
Q ss_pred eEeeCCCceEEEEEEEcCCCC-----CCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccc
Q 011833 69 YVAVPNSDWRLALWRYLPSPA-----APQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 69 ~v~~~~dG~~L~~~~~~p~~~-----~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~ 143 (476)
.+....+|..+.++.|.|... ..++.|+||++||++++...|.. ...+...+.+.|+.|+++|+++++.+...
T Consensus 11 ~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 88 (263)
T 2uz0_A 11 EYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHNSWLK--RTNVERLLRGTNLIVVMPNTSNGWYTDTQ 88 (263)
T ss_dssp EEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCTTHHHH--HSCHHHHTTTCCCEEEECCCTTSTTSBCT
T ss_pred EEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHHHHHh--ccCHHHHHhcCCeEEEEECCCCCccccCC
Confidence 443356788899999988654 23456889999999998888730 00234444557999999999988776432
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
..
T Consensus 89 ~~------------------------------------------------------------------------------ 90 (263)
T 2uz0_A 89 YG------------------------------------------------------------------------------ 90 (263)
T ss_dssp TS------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 11
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~ 297 (476)
..+.+...+|+..+++........+.+++.++||||||.+++.++. +| .+|++++++++..+...
T Consensus 91 ---~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~-----~~~~~~v~~~~~~~~~~ 155 (263)
T 2uz0_A 91 ---FDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TT-----NRFSHAASFSGALSFQN 155 (263)
T ss_dssp ---CBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HH-----CCCSEEEEESCCCCSSS
T ss_pred ---ccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-Cc-----cccceEEEecCCcchhh
Confidence 0111222356666666543323333458999999999999999998 77 78999999999876443
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-16 Score=157.95 Aligned_cols=215 Identities=12% Similarity=0.076 Sum_probs=128.8
Q ss_pred CCCCcEEEecCCCCCc--ceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCccccccc
Q 011833 92 QRNHPLLLLSGIGTNA--IGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRES 169 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~--~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 169 (476)
+.+++|||+||++++. ..| ..++..|. .+|.|+++|+||+|.|....
T Consensus 65 ~~~~~lvllhG~~~~~~~~~~-----~~~~~~l~-~~~~v~~~d~~G~G~s~~~~------------------------- 113 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGPHEF-----TRLAGALR-GIAPVRAVPQPGYEEGEPLP------------------------- 113 (300)
T ss_dssp SCSSEEEECCCSSTTCSTTTT-----HHHHHHTS-SSCCBCCCCCTTSSTTCCBC-------------------------
T ss_pred CCCCeEEEECCCcccCcHHHH-----HHHHHhcC-CCceEEEecCCCCCCCCCCC-------------------------
Confidence 3478999999999977 777 46777775 46999999999999975421
Q ss_pred chhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhC
Q 011833 170 QSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSK 249 (476)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~ 249 (476)
+++++++ +|+. +.+.+..+
T Consensus 114 ---------------------------------------------------------~~~~~~a-~~~~---~~l~~~~~ 132 (300)
T 1kez_A 114 ---------------------------------------------------------SSMAAVA-AVQA---DAVIRTQG 132 (300)
T ss_dssp ---------------------------------------------------------SSHHHHH-HHHH---HHHHHHCS
T ss_pred ---------------------------------------------------------CCHHHHH-HHHH---HHHHHhcC
Confidence 2334444 3433 34444443
Q ss_pred CCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhh
Q 011833 250 PKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAI 329 (476)
Q Consensus 250 ~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (476)
. ++++++||||||.+++.++.++|-. ..+|+++|++++....... ....+ ...+
T Consensus 133 ~--~~~~LvGhS~GG~vA~~~A~~~p~~--g~~v~~lvl~~~~~~~~~~--~~~~~--------------------~~~~ 186 (300)
T 1kez_A 133 D--KPFVVAGHSAGALMAYALATELLDR--GHPPRGVVLIDVYPPGHQD--AMNAW--------------------LEEL 186 (300)
T ss_dssp S--CCEEEECCTHHHHHHHHHHHHTTTT--TCCCSEEECBTCCCTTTCH--HHHHH--------------------HHHH
T ss_pred C--CCEEEEEECHhHHHHHHHHHHHHhc--CCCccEEEEECCCCCcchh--HHHHH--------------------HHHH
Confidence 3 4899999999999999999987611 2579999999986432210 00000 0000
Q ss_pred ccCCCCchHHHHHHHHhhcCCC-CCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEE
Q 011833 330 HPFASSPPYVLSWLKFLISAPD-MMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLA 408 (476)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLi 408 (476)
....+.... .+....+. .+..+...+ . .+ .+.++++|+|+
T Consensus 187 -------------~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~-----~------~~--~~~~i~~P~li 227 (300)
T 1kez_A 187 -------------TATLFDRETVRMDDTRLT-------------ALGAYDRLT-----G------QW--RPRETGLPTLL 227 (300)
T ss_dssp -------------HGGGCCCCSSCCCHHHHH-------------HHHHHHHHT-----T------TC--CCCCCSCCBEE
T ss_pred -------------HHHHHhCcCCccchHHHH-------------HHHHHHHHH-----h------cC--CCCCCCCCEEE
Confidence 000010000 01111000 011111110 0 01 34778999999
Q ss_pred EeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 409 LAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 409 i~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
|+|+ |.++++.. ..+.+.++. ..+++++ ++ ||+.++ .+.++.+.+.|.+||++..
T Consensus 228 i~G~-d~~~~~~~-~~~~~~~~~-~~~~~~i-----~g-gH~~~~--~e~~~~~~~~i~~fl~~~~ 282 (300)
T 1kez_A 228 VSAG-EPMGPWPD-DSWKPTWPF-EHDTVAV-----PG-DHFTMV--QEHADAIARHIDAWLGGGN 282 (300)
T ss_dssp EEES-SCSSCCCS-SCCSCCCSS-CCEEEEE-----SS-CTTTSS--SSCSHHHHHHHHHHHTCC-
T ss_pred EEeC-CCCCCCcc-cchhhhcCC-CCeEEEe-----cC-CChhhc--cccHHHHHHHHHHHHHhcc
Confidence 9995 55555544 334444543 2467776 77 996542 2778999999999998754
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.69 E-value=4.6e-17 Score=154.04 Aligned_cols=188 Identities=15% Similarity=0.143 Sum_probs=125.6
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
.+++|||+||++++...| ..+++.|...|+.|+++|.+|++.-+.... .+.
T Consensus 21 a~~~Vv~lHG~G~~~~~~-----~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~----------------------~~~-- 71 (210)
T 4h0c_A 21 AKKAVVMLHGRGGTAADI-----ISLQKVLKLDEMAIYAPQATNNSWYPYSFM----------------------APV-- 71 (210)
T ss_dssp CSEEEEEECCTTCCHHHH-----HGGGGTSSCTTEEEEEECCGGGCSSSSCTT----------------------SCG--
T ss_pred CCcEEEEEeCCCCCHHHH-----HHHHHHhCCCCeEEEeecCCCCCccccccC----------------------CCc--
Confidence 468899999999998888 478888888899999999988653111000 000
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
.+ ..-.+++. .+.+..+++.+.+ .+.+.
T Consensus 72 ---------------------------------------~~-----------~~~~~~~~-~~~i~~~~~~~~~-~~i~~ 99 (210)
T 4h0c_A 72 ---------------------------------------QQ-----------NQPALDSA-LALVGEVVAEIEA-QGIPA 99 (210)
T ss_dssp ---------------------------------------GG-----------GTTHHHHH-HHHHHHHHHHHHH-TTCCG
T ss_pred ---------------------------------------cc-----------chHHHHHH-HHHHHHHHHHHHH-hCCCh
Confidence 00 00011111 1345555555543 35556
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccC
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPF 332 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (476)
++++++|+||||.+++.++.++| .++++++.+++.......
T Consensus 100 ~ri~l~G~S~Gg~~a~~~a~~~p-----~~~~~vv~~sg~l~~~~~---------------------------------- 140 (210)
T 4h0c_A 100 EQIYFAGFSQGACLTLEYTTRNA-----RKYGGIIAFTGGLIGQEL---------------------------------- 140 (210)
T ss_dssp GGEEEEEETHHHHHHHHHHHHTB-----SCCSEEEEETCCCCSSSC----------------------------------
T ss_pred hhEEEEEcCCCcchHHHHHHhCc-----ccCCEEEEecCCCCChhh----------------------------------
Confidence 79999999999999999999987 889999988764311100
Q ss_pred CCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeC
Q 011833 333 ASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAAD 412 (476)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~ 412 (476)
... . ......++|+|++||+
T Consensus 141 ---------------------~~~-------------------------------------~--~~~~~~~~Pvl~~hG~ 160 (210)
T 4h0c_A 141 ---------------------AIG-------------------------------------N--YKGDFKQTPVFISTGN 160 (210)
T ss_dssp ---------------------CGG-------------------------------------G--CCBCCTTCEEEEEEEE
T ss_pred ---------------------hhh-------------------------------------h--hhhhccCCceEEEecC
Confidence 000 0 0011235799999999
Q ss_pred CCCcCCHHHHHHHHHhcCC--CceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 413 QDLICPTEAVYETVKLIPE--HLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 413 ~D~~vp~~~~~~~~~~l~~--~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
+|+++|.+.++++.+.+.. ..++++++ |+.||. .. .+-.+.|.+||.|
T Consensus 161 ~D~~vp~~~~~~~~~~L~~~g~~v~~~~y-----pg~gH~---i~----~~el~~i~~wL~k 210 (210)
T 4h0c_A 161 PDPHVPVSRVQESVTILEDMNAAVSQVVY-----PGRPHT---IS----GDEIQLVNNTILK 210 (210)
T ss_dssp SCTTSCHHHHHHHHHHHHHTTCEEEEEEE-----ETCCSS---CC----HHHHHHHHHTTTC
T ss_pred CCCccCHHHHHHHHHHHHHCCCCeEEEEE-----CCCCCC---cC----HHHHHHHHHHHcC
Confidence 9999999999988887754 34677776 899992 11 3346788899864
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.3e-16 Score=153.75 Aligned_cols=233 Identities=15% Similarity=0.184 Sum_probs=143.5
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCC--cEEEecCCCCCCcccccccCccccccccccccCCCcccccccc
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGF--DTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQ 170 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy--~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 170 (476)
..+||||+||++++...| ..+++.|.++|| .|+.+|.+++|.++-... ....
T Consensus 5 ~~~pvvliHG~~~~~~~~-----~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~-----------------~~~~---- 58 (249)
T 3fle_A 5 KTTATLFLHGYGGSERSE-----TFMVKQALNKNVTNEVITARVSSEGKVYFDKK-----------------LSED---- 58 (249)
T ss_dssp CCEEEEEECCTTCCGGGT-----HHHHHHHHTTTSCSCEEEEEECSSCCEEESSC-----------------CC------
T ss_pred CCCcEEEECCCCCChhHH-----HHHHHHHHHcCCCceEEEEEECCCCCEEEccc-----------------cccc----
Confidence 468999999999999999 589999999986 699999999997632110 0000
Q ss_pred hhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCC
Q 011833 171 SKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKP 250 (476)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~ 250 (476)
...|-. ... | ....+.++.+++ +++.++++.+.+..+.
T Consensus 59 -------------------------~~~P~i-------~v~---f------~~n~~~~~~~~~-~~l~~~i~~l~~~~~~ 96 (249)
T 3fle_A 59 -------------------------AANPIV-------KVE---F------KDNKNGNFKENA-YWIKEVLSQLKSQFGI 96 (249)
T ss_dssp -------------------------CCSCEE-------EEE---E------SSTTCCCHHHHH-HHHHHHHHHHHHTTCC
T ss_pred -------------------------cCCCeE-------EEE---c------CCCCCccHHHHH-HHHHHHHHHHHHHhCC
Confidence 000000 000 0 000011233334 7888899999888776
Q ss_pred CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhc
Q 011833 251 KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIH 330 (476)
Q Consensus 251 ~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (476)
. ++.+|||||||.+++.++..+|-.....+|+++|+++++..-.... ..+.. ..
T Consensus 97 ~--~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~---------~~~~~---------------~~ 150 (249)
T 3fle_A 97 Q--QFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNM---------NENVN---------------EI 150 (249)
T ss_dssp C--EEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTT---------SSCTT---------------TS
T ss_pred C--ceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccc---------cCCcc---------------hh
Confidence 5 8999999999999999999887211114799999999886432110 00000 00
Q ss_pred cCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEe
Q 011833 331 PFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALA 410 (476)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~ 410 (476)
.+. . ...+..++ ..++.+ ......+.+.++|||.|+
T Consensus 151 -~~~------~-----~g~p~~~~-~~~~~l-------------------------------~~~~~~~p~~~~~vl~I~ 186 (249)
T 3fle_A 151 -IVD------K-----QGKPSRMN-AAYRQL-------------------------------LSLYKIYCGKEIEVLNIY 186 (249)
T ss_dssp -CBC------T-----TCCBSSCC-HHHHHT-------------------------------GGGHHHHTTTTCEEEEEE
T ss_pred -hhc------c-----cCCCcccC-HHHHHH-------------------------------HHHHhhCCccCCeEEEEe
Confidence 000 0 00000011 111111 001124555689999999
Q ss_pred eC------CCCcCCHHHHHHHHHhcCCCceeEE--EecCCCCCCCcccccccccCCccchhHHHHHHH
Q 011833 411 AD------QDLICPTEAVYETVKLIPEHLVSFK--VFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFL 470 (476)
Q Consensus 411 G~------~D~~vp~~~~~~~~~~l~~~~~~~~--v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL 470 (476)
|+ .|.+||...++.+...+++....+. ++ .++++.|..+. + ..+|.+.|.+||
T Consensus 187 G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v---~g~~a~Hs~l~---~-n~~V~~~I~~FL 247 (249)
T 3fle_A 187 GDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKF---KGAKAQHSQLH---E-NKDVANEIIQFL 247 (249)
T ss_dssp EECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEE---ESGGGSTGGGG---G-CHHHHHHHHHHH
T ss_pred ccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEE---eCCCCchhccc---c-CHHHHHHHHHHh
Confidence 98 6999999999888777775433333 23 34568897763 3 479999999998
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.69 E-value=3.2e-16 Score=160.27 Aligned_cols=207 Identities=15% Similarity=0.212 Sum_probs=140.9
Q ss_pred CC-CceEEEEEEEcCCCC-CCCCCCcEEEecCCCCCcceeec-----CCCCCH--HHHHHhCCCcEEEecCCCCCCcccc
Q 011833 73 PN-SDWRLALWRYLPSPA-APQRNHPLLLLSGIGTNAIGYDL-----SPEYSF--ARYMSGQGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 73 ~~-dG~~L~~~~~~p~~~-~~~~~~~VlllHG~~~~~~~~~~-----~~~~~l--~~~L~~~Gy~V~~~D~rG~G~S~~~ 143 (476)
.. ||..+.++.|.|... ..++.|+||++||++.+...+.. .....+ ..+....|+.|+++|.||.+.....
T Consensus 151 ~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~~~~ 230 (380)
T 3doh_A 151 DPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSWSTL 230 (380)
T ss_dssp CTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCSBTT
T ss_pred cCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCccccc
Confidence 45 899999999988762 23345889999999876533310 000111 2234466789999999987654221
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
|....
T Consensus 231 ----------------------~~~~~----------------------------------------------------- 235 (380)
T 3doh_A 231 ----------------------FTDRE----------------------------------------------------- 235 (380)
T ss_dssp ----------------------TTCSS-----------------------------------------------------
T ss_pred ----------------------ccccc-----------------------------------------------------
Confidence 11000
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHH
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLR 303 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~ 303 (476)
....... ..+|+.++++++.+..+.+.+++.++||||||.+++.++.++| ..+++++++++....
T Consensus 236 -~~~~~~~-~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p-----~~~~~~v~~sg~~~~-------- 300 (380)
T 3doh_A 236 -NPFNPEK-PLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFP-----ELFAAAIPICGGGDV-------- 300 (380)
T ss_dssp -CTTSBCH-HHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCT-----TTCSEEEEESCCCCG--------
T ss_pred -cccCCcc-hHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCC-----ccceEEEEecCCCCh--------
Confidence 0011111 2368888889888887765568999999999999999999987 789999998875310
Q ss_pred HhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHh
Q 011833 304 LLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQE 383 (476)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (476)
T Consensus 301 -------------------------------------------------------------------------------- 300 (380)
T 3doh_A 301 -------------------------------------------------------------------------------- 300 (380)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccCCcccccccCCCC-cccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCC--------ccccc
Q 011833 384 GGLCDRSGTFFYKDHIGKT-NVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHY--------AHYDL 452 (476)
Q Consensus 384 ~~~~~~~g~~~~~~~l~~i-~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~--------gH~~~ 452 (476)
..+.++ .+|+|+++|++|.++|++.++++.+.+... .++++++ ++. +|..
T Consensus 301 -------------~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~-----~~~~h~~h~~~~H~~- 361 (380)
T 3doh_A 301 -------------SKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEY-----EKGFMEKHGWDPHGS- 361 (380)
T ss_dssp -------------GGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEE-----CTTHHHHTTCCTTCT-
T ss_pred -------------hhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEe-----cCCcccCCCCCCchh-
Confidence 011223 389999999999999999999999887643 3567777 787 5632
Q ss_pred ccccCCccchhH--HHHHHHHhhc
Q 011833 453 VGSRLAAYQVYP--CIIEFLTRHD 474 (476)
Q Consensus 453 ~~~~~~~~~v~~--~i~~fL~~~~ 474 (476)
....+. .+++||.++.
T Consensus 362 ------~~~~~~~~~i~~wL~~~~ 379 (380)
T 3doh_A 362 ------WIPTYENQEAIEWLFEQS 379 (380)
T ss_dssp ------HHHHHTCHHHHHHHHTCC
T ss_pred ------HHHhcCCHHHHHHHHhhc
Confidence 234444 8999998764
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.68 E-value=1e-15 Score=150.78 Aligned_cols=128 Identities=17% Similarity=0.179 Sum_probs=94.6
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCC--------------
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAG-------------- 138 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G-------------- 138 (476)
+.+|..+.++.|.|... ....|+||++||++.+...|. ..+++.|.++||.|+++|+|+.+
T Consensus 34 ~~~~~~l~~~~~~P~~~-~~~~p~vv~lHG~~~~~~~~~----~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g 108 (304)
T 3d0k_A 34 RNADRPFTLNTYRPYGY-TPDRPVVVVQHGVLRNGADYR----DFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFT 108 (304)
T ss_dssp -CTTCCEEEEEEECTTC-CTTSCEEEEECCTTCCHHHHH----HHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBC
T ss_pred CCCCceEEEEEEeCCCC-CCCCcEEEEeCCCCCCHHHHH----HHHHHHHHHCCcEEEEeCCccccCCCccccccCcccc
Confidence 35788899988888653 235789999999999887662 24578888899999999999553
Q ss_pred CcccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhh
Q 011833 139 LSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQ 218 (476)
Q Consensus 139 ~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (476)
.|....
T Consensus 109 ~s~~~~-------------------------------------------------------------------------- 114 (304)
T 3d0k_A 109 AAGNPR-------------------------------------------------------------------------- 114 (304)
T ss_dssp TTSCBC--------------------------------------------------------------------------
T ss_pred ccCCCC--------------------------------------------------------------------------
Confidence 221110
Q ss_pred hhcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 219 LDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 219 ~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
..+....+|+.++++++.+..+.+.++++++||||||.+++.++.++| +.+++++|+.+++
T Consensus 115 ---------~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p----~~~~~~~vl~~~~ 175 (304)
T 3d0k_A 115 ---------HVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQP----HAPFHAVTAANPG 175 (304)
T ss_dssp ---------CGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSC----STTCSEEEEESCS
T ss_pred ---------cccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCC----CCceEEEEEecCc
Confidence 001112357888999998876655679999999999999999999876 3478898877754
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.67 E-value=9.4e-16 Score=149.51 Aligned_cols=67 Identities=18% Similarity=0.214 Sum_probs=51.0
Q ss_pred CCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccc-cCCccchhHHHHHHHHhh
Q 011833 399 IGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGS-RLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 399 l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~-~~~~~~v~~~i~~fL~~~ 473 (476)
+.++ .|+|+++|++|.+++.+.++++.+.+++. +++++ ++++|.-.... ....+++.+.+.+||+++
T Consensus 207 l~~l-pP~li~~G~~D~~~~~~~~~~l~~~~~~~--~l~~~-----~g~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 274 (274)
T 2qru_A 207 LKTF-PPCFSTASSSDEEVPFRYSKKIGRTIPES--TFKAV-----YYLEHDFLKQTKDPSVITLFEQLDSWLKER 274 (274)
T ss_dssp HHTS-CCEEEEEETTCSSSCTHHHHHHHHHSTTC--EEEEE-----CSCCSCGGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred hcCC-CCEEEEEecCCCCcCHHHHHHHHHhCCCc--EEEEc-----CCCCcCCccCcCCHHHHHHHHHHHHHHhhC
Confidence 4556 89999999999999999999999999865 78887 89999432211 111246688999999864
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=4.7e-15 Score=143.20 Aligned_cols=133 Identities=16% Similarity=0.200 Sum_probs=92.9
Q ss_pred CCCceEEEEEEEcCCCCC-CCCCCcEEEecCCCCCcceeecC-C-CCCHHHHHHhC----CCcEEEecCCCCCCcccccc
Q 011833 73 PNSDWRLALWRYLPSPAA-PQRNHPLLLLSGIGTNAIGYDLS-P-EYSFARYMSGQ----GFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~-~~~~~~VlllHG~~~~~~~~~~~-~-~~~l~~~L~~~----Gy~V~~~D~rG~G~S~~~~~ 145 (476)
..+|..+.++.|.|.... .++.|+||++||.+++...|... . ...++..|+++ ||.|+++|.+|++.+...
T Consensus 40 ~~~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~~-- 117 (268)
T 1jjf_A 40 TATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIAD-- 117 (268)
T ss_dssp TTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSC--
T ss_pred cccCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCccccc--
Confidence 457888999998887532 34568999999999888777310 0 01246777776 599999999998753110
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
T Consensus 118 -------------------------------------------------------------------------------- 117 (268)
T 1jjf_A 118 -------------------------------------------------------------------------------- 117 (268)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCC--CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKP--KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~--~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
.+..+..+.+.++++++.+.... +.+++.++||||||.+++.++.++| ..+++++++++..+
T Consensus 118 --~~~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p-----~~~~~~v~~s~~~~ 181 (268)
T 1jjf_A 118 --GYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNL-----DKFAYIGPISAAPN 181 (268)
T ss_dssp --HHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCT-----TTCSEEEEESCCTT
T ss_pred --cHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCc-----hhhhheEEeCCCCC
Confidence 01111111245566777766554 3468999999999999999999987 77999999988643
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.7e-15 Score=154.66 Aligned_cols=63 Identities=13% Similarity=0.122 Sum_probs=50.8
Q ss_pred CCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCc-eeEEEecCCCCCC--CcccccccccCCccchhHHHHHHHHhhc
Q 011833 401 KTNVPVLALAADQDLICPTEAVYETVKLIPEHL-VSFKVFGEPRGPH--YAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 401 ~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~-~~~~v~~~~~~~~--~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
++++|+|++||++|.++|++.++++++.+.... ++++.+ ++ .+|... .....+.+++||+++.
T Consensus 305 ~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~v~~~~~-----~~~~~~H~~~------~~~~~~~~~~wl~~~~ 370 (377)
T 4ezi_A 305 KPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSDFVWIKS-----VSDALDHVQA------HPFVLKEQVDFFKQFE 370 (377)
T ss_dssp CCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCSCEEEEE-----SCSSCCTTTT------HHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEEc-----CCCCCCccCh------HHHHHHHHHHHHHHhh
Confidence 678999999999999999999999999885433 678877 66 889432 2567889999998863
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.66 E-value=5.5e-16 Score=149.85 Aligned_cols=157 Identities=13% Similarity=0.177 Sum_probs=99.1
Q ss_pred eEeeCCCceEEEEEEEcCCCCC-CCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccC
Q 011833 69 YVAVPNSDWRLALWRYLPSPAA-PQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 69 ~v~~~~dG~~L~~~~~~p~~~~-~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
.+....+|..+.++.|.|.... .++.|+||++||++.+...|.. ...+.+.+.+.|+.|+++|.+++|.+.....
T Consensus 19 ~~~s~~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~~~~~--~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~-- 94 (280)
T 3ls2_A 19 THSAVSTHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENFMQ--KAGAFKKAAELGIAIVAPDTSPRGDNVPNED-- 94 (280)
T ss_dssp EEEETTTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSHHHHH--HSCCHHHHHHHTCEEEECCSSCCSTTSCCCS--
T ss_pred EEechhcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChhhhhc--chhHHHHHhhCCeEEEEeCCccccccccccc--
Confidence 3433567899999999887532 2356889999999988877731 0135667778899999999998887643221
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
.-..|.+..|.... ++.| + ...+
T Consensus 95 ---------~~~~g~g~~~~~~~-------------------------~~~~---------------~--------~~~~ 117 (280)
T 3ls2_A 95 ---------SYDFAQGAGFYVNA-------------------------TQAP---------------Y--------NTHF 117 (280)
T ss_dssp ---------CTTSSTTCCTTCBC-------------------------CSTT---------------T--------TTTC
T ss_pred ---------ccccccCCcccccc-------------------------cccc---------------c--------cccc
Confidence 00012111111110 0000 0 0012
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
.+.+++.+|+. .++.+.... .++++++||||||.+++.++.++| ..+++++++++..+.
T Consensus 118 ~~~~~~~~~~~---~~i~~~~~~-~~~~~l~G~S~GG~~a~~~a~~~p-----~~~~~~~~~s~~~~~ 176 (280)
T 3ls2_A 118 NMYDYVVNELP---ALIEQHFPV-TSTKAISGHSMGGHGALMIALKNP-----QDYVSASAFSPIVNP 176 (280)
T ss_dssp BHHHHHHTHHH---HHHHHHSSE-EEEEEEEEBTHHHHHHHHHHHHST-----TTCSCEEEESCCSCG
T ss_pred cHHHHHHHHHH---HHHHhhCCC-CCCeEEEEECHHHHHHHHHHHhCc-----hhheEEEEecCccCc
Confidence 33343444444 444444433 258999999999999999999988 789999999987653
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-15 Score=166.56 Aligned_cols=149 Identities=14% Similarity=0.112 Sum_probs=100.4
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCc--ceeecCCCC-CHH---HHHHhCCCcEEEecCCCCCCc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNA--IGYDLSPEY-SFA---RYMSGQGFDTWILEVRGAGLS 140 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~--~~~~~~~~~-~l~---~~L~~~Gy~V~~~D~rG~G~S 140 (476)
...+. ..||.+|.++.|.|... ++.|+||++||++.+. ..|...... .+. +.|+++||.|+++|+||+|.|
T Consensus 27 ~v~i~-~~DG~~L~~~~~~P~~~--~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S 103 (615)
T 1mpx_A 27 EVMIP-MRDGVKLHTVIVLPKGA--KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGS 103 (615)
T ss_dssp EEEEE-CTTSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTC
T ss_pred EEEEE-CCCCCEEEEEEEeCCCC--CCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCC
Confidence 33454 67999999999988643 3457788899987653 011000000 122 789999999999999999998
Q ss_pred ccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhh
Q 011833 141 AHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLD 220 (476)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (476)
.+..... .| .+.++
T Consensus 104 ~g~~~~~--------------------------------------------------~~-----------~~~~~----- 117 (615)
T 1mpx_A 104 EGDYVMT--------------------------------------------------RP-----------LRGPL----- 117 (615)
T ss_dssp CSCCCTT--------------------------------------------------CC-----------CSBTT-----
T ss_pred CCccccc--------------------------------------------------cc-----------ccccc-----
Confidence 6532100 00 00000
Q ss_pred cccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 221 LIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 221 ~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
..+... ..+|+.++++++.++....++++.++||||||.+++.+++.+| .+++++|.+++..++
T Consensus 118 ----~~~g~~--~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~-----~~l~a~v~~~~~~d~ 181 (615)
T 1mpx_A 118 ----NPSEVD--HATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPH-----PALKVAVPESPMIDG 181 (615)
T ss_dssp ----BCSSCC--HHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCC-----TTEEEEEEESCCCCT
T ss_pred ----cccccc--HHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCC-----CceEEEEecCCcccc
Confidence 000011 2479999999998873333359999999999999999998766 789999999998873
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2e-16 Score=159.18 Aligned_cols=106 Identities=18% Similarity=0.206 Sum_probs=84.4
Q ss_pred CCCCcEEEecCCCCCcce-eecCCCC-CHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCccccccc
Q 011833 92 QRNHPLLLLSGIGTNAIG-YDLSPEY-SFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRES 169 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~-~~~~~~~-~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 169 (476)
+.+++|||+||++++... | . .+++.|.++||+|+++|+||+|.++...
T Consensus 29 ~~~~~VvllHG~~~~~~~~~-----~~~l~~~L~~~G~~v~~~d~~g~g~~~~~~------------------------- 78 (317)
T 1tca_A 29 SVSKPILLVPGTGTTGPQSF-----DSNWIPLSTQLGYTPCWISPPPFMLNDTQV------------------------- 78 (317)
T ss_dssp SCSSEEEEECCTTCCHHHHH-----TTTHHHHHHTTTCEEEEECCTTTTCSCHHH-------------------------
T ss_pred CCCCeEEEECCCCCCcchhh-----HHHHHHHHHhCCCEEEEECCCCCCCCcHHH-------------------------
Confidence 356889999999999886 8 5 8999999999999999999998763210
Q ss_pred chhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhC
Q 011833 170 QSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSK 249 (476)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~ 249 (476)
..+++.++++.+.+..+
T Consensus 79 ---------------------------------------------------------------~~~~l~~~i~~~~~~~g 95 (317)
T 1tca_A 79 ---------------------------------------------------------------NTEYMVNAITALYAGSG 95 (317)
T ss_dssp ---------------------------------------------------------------HHHHHHHHHHHHHHHTT
T ss_pred ---------------------------------------------------------------HHHHHHHHHHHHHHHhC
Confidence 12577788888887766
Q ss_pred CCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 250 PKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 250 ~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
. +++++|||||||.++..++..+| ....+|+++|+++++..
T Consensus 96 ~--~~v~lVGhS~GG~va~~~~~~~~--~~~~~v~~lV~l~~~~~ 136 (317)
T 1tca_A 96 N--NKLPVLTWSQGGLVAQWGLTFFP--SIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp S--CCEEEEEETHHHHHHHHHHHHCG--GGTTTEEEEEEESCCTT
T ss_pred C--CCEEEEEEChhhHHHHHHHHHcC--ccchhhhEEEEECCCCC
Confidence 4 38999999999999988887654 01267999999998753
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-15 Score=151.71 Aligned_cols=125 Identities=18% Similarity=0.194 Sum_probs=95.4
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhh
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQA 314 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~ 314 (476)
+++.++++.+.+..+.+.++|+++|+|+||.+++.++.++| .+++++|.+++....
T Consensus 139 ~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p-----~~~a~vv~~sG~l~~------------------- 194 (285)
T 4fhz_A 139 RDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRA-----EEIAGIVGFSGRLLA------------------- 194 (285)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSS-----SCCSEEEEESCCCSC-------------------
T ss_pred HHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCc-----ccCceEEEeecCccC-------------------
Confidence 57778888888888888789999999999999999999987 789999987753210
Q ss_pred ccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCccc
Q 011833 315 LNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFF 394 (476)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 394 (476)
++.+.
T Consensus 195 ----------------------------------------~~~~~----------------------------------- 199 (285)
T 4fhz_A 195 ----------------------------------------PERLA----------------------------------- 199 (285)
T ss_dssp ----------------------------------------HHHHH-----------------------------------
T ss_pred ----------------------------------------chhhh-----------------------------------
Confidence 00000
Q ss_pred ccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 395 YKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 395 ~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
...+.++|+|++||++|.++|.+.++++.+.+... .++++++ ++.||. . ..+.++.+.+||++
T Consensus 200 ---~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y-----~g~gH~---i----~~~~l~~~~~fL~~ 264 (285)
T 4fhz_A 200 ---EEARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVM-----KGTGHG---I----APDGLSVALAFLKE 264 (285)
T ss_dssp ---HHCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEE-----TTCCSS---C----CHHHHHHHHHHHHH
T ss_pred ---hhhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEE-----CCCCCC---C----CHHHHHHHHHHHHH
Confidence 01124689999999999999999999888877543 4667776 899992 1 14457889999987
Q ss_pred h
Q 011833 473 H 473 (476)
Q Consensus 473 ~ 473 (476)
+
T Consensus 265 ~ 265 (285)
T 4fhz_A 265 R 265 (285)
T ss_dssp H
T ss_pred H
Confidence 6
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.8e-15 Score=164.49 Aligned_cols=136 Identities=19% Similarity=0.112 Sum_probs=101.9
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHH-HHHHhCCCcEEEecCCCCCCcccccc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFA-RYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~-~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
...+. +.||.+|.++.|.|... ++.|+||++||++.....+. .+...+ +.|+++||.|+++|+||+|.|.+...
T Consensus 11 ~v~i~-~~DG~~L~~~~~~P~~~--~~~P~vv~~~~~g~~~~~~~--~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~ 85 (587)
T 3i2k_A 11 NVMVP-MRDGVRLAVDLYRPDAD--GPVPVLLVRNPYDKFDVFAW--STQSTNWLEFVRDGYAVVIQDTRGLFASEGEFV 85 (587)
T ss_dssp EEEEE-CTTSCEEEEEEEEECCS--SCEEEEEEEESSCTTCHHHH--HTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCC
T ss_pred EEEEE-CCCCCEEEEEEEECCCC--CCeeEEEEECCcCCCccccc--cchhhHHHHHHHCCCEEEEEcCCCCCCCCCccc
Confidence 34555 68999999999988643 35688899999887753220 002245 89999999999999999999965321
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
T Consensus 86 -------------------------------------------------------------------------------- 85 (587)
T 3i2k_A 86 -------------------------------------------------------------------------------- 85 (587)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc-cccc
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS-LDYR 296 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~-~~~~ 296 (476)
.+.+ ..+|+.++++++.++... ++++.++||||||.+++.+++.+| ..++++|.+++. .+..
T Consensus 86 --~~~~-~~~D~~~~i~~l~~~~~~-~~~v~l~G~S~GG~~a~~~a~~~~-----~~l~a~v~~~~~~~d~~ 148 (587)
T 3i2k_A 86 --PHVD-DEADAEDTLSWILEQAWC-DGNVGMFGVSYLGVTQWQAAVSGV-----GGLKAIAPSMASADLYR 148 (587)
T ss_dssp --TTTT-HHHHHHHHHHHHHHSTTE-EEEEEECEETHHHHHHHHHHTTCC-----TTEEEBCEESCCSCTCC
T ss_pred --cccc-hhHHHHHHHHHHHhCCCC-CCeEEEEeeCHHHHHHHHHHhhCC-----CccEEEEEeCCcccccc
Confidence 0011 147999999999775322 368999999999999999999876 789999999987 5543
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=7.5e-16 Score=157.71 Aligned_cols=45 Identities=20% Similarity=0.256 Sum_probs=40.3
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccc
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~ 142 (476)
+.|+||++||++++...| ..+++.|+++||.|+++|+||+|.|..
T Consensus 97 ~~P~Vv~~HG~~~~~~~~-----~~~a~~La~~Gy~V~~~d~~g~g~s~~ 141 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLY-----SAIGIDLASHGFIVAAVEHRDRSASAT 141 (383)
T ss_dssp CEEEEEEECCTTCCTTTT-----HHHHHHHHHTTCEEEEECCCSSCSSEE
T ss_pred CCCEEEEcCCCCCCchHH-----HHHHHHHHhCceEEEEeccCCCCccce
Confidence 568899999999998888 589999999999999999999998753
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.63 E-value=4.3e-15 Score=152.78 Aligned_cols=74 Identities=11% Similarity=-0.019 Sum_probs=51.3
Q ss_pred eEeeCCCc--eEEEEEEEcCCCCC-CCCCCcEEEecCCCCCcceee------cCCCCCHHHHHHhCCCcEEEecCCCCCC
Q 011833 69 YVAVPNSD--WRLALWRYLPSPAA-PQRNHPLLLLSGIGTNAIGYD------LSPEYSFARYMSGQGFDTWILEVRGAGL 139 (476)
Q Consensus 69 ~v~~~~dG--~~L~~~~~~p~~~~-~~~~~~VlllHG~~~~~~~~~------~~~~~~l~~~L~~~Gy~V~~~D~rG~G~ 139 (476)
|..+..+| ..+.++.+.|.... .++.|+||++||++++...+. ...+..++..|+++||.|+++|+||+|.
T Consensus 51 y~t~~~~g~~~~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~ 130 (397)
T 3h2g_A 51 YATIGVEGEPATASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGK 130 (397)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTT
T ss_pred EEecCCCCCeEEEEEEEEeCCCCCCCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCC
Confidence 33333445 45777777776532 345678899999988765410 0011578888999999999999999999
Q ss_pred ccc
Q 011833 140 SAH 142 (476)
Q Consensus 140 S~~ 142 (476)
|..
T Consensus 131 s~~ 133 (397)
T 3h2g_A 131 SNY 133 (397)
T ss_dssp CCC
T ss_pred CCC
Confidence 854
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.7e-16 Score=162.13 Aligned_cols=155 Identities=14% Similarity=0.142 Sum_probs=103.9
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceee-------------cCCCCCHHHHHHhCCCcEEEecCCCCCC
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYD-------------LSPEYSFARYMSGQGFDTWILEVRGAGL 139 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~-------------~~~~~~l~~~L~~~Gy~V~~~D~rG~G~ 139 (476)
+.+|..+.++.+.|... .++.|+||++||++++...+. ..+...+++.|+++||.|+++|+||+|.
T Consensus 94 ~~~g~~l~~~l~~P~~~-~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~rg~G~ 172 (391)
T 3g8y_A 94 PFPKSVSTFLVLKPEHL-KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAAAGE 172 (391)
T ss_dssp CSTTCCEEEEEEEETTC-CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCTTSGG
T ss_pred cCCCCEEEEEEEeCCCC-CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCCCccc
Confidence 56899999999988653 345789999999988764220 0112278999999999999999999999
Q ss_pred cccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhh
Q 011833 140 SAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQL 219 (476)
Q Consensus 140 S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (476)
|....... .|.. .....+...+
T Consensus 173 s~~~~~~~------------~~~~----------------------------------------------~~~~~~~~~~ 194 (391)
T 3g8y_A 173 ASDLECYD------------KGWN----------------------------------------------YDYDVVSRFL 194 (391)
T ss_dssp GCSSGGGT------------TTTS----------------------------------------------CCHHHHHHHH
T ss_pred cCCccccc------------cccc----------------------------------------------chHHHHHHHH
Confidence 86532100 0000 0000000000
Q ss_pred hcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 220 DLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 220 ~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
. ....++..+...|+.++++++.++...+.++|.++||||||.+++.+++.. .+|+++|+.++...+
T Consensus 195 ~---~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~~------~~i~a~v~~~~~~~~ 261 (391)
T 3g8y_A 195 L---ELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLD------KDIYAFVYNDFLCQT 261 (391)
T ss_dssp H---HTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHHC------TTCCEEEEESCBCCH
T ss_pred H---hcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHcC------CceeEEEEccCCCCc
Confidence 0 001233333457999999999887655556899999999999999888763 679999988875543
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.61 E-value=3e-15 Score=145.26 Aligned_cols=157 Identities=17% Similarity=0.254 Sum_probs=96.7
Q ss_pred eEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCc
Q 011833 69 YVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGE 148 (476)
Q Consensus 69 ~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~ 148 (476)
.+....+|..+.++.|.|.....++.|+||++||++.+...|.. ...+...+++.||.|+++|.+++|.+.....
T Consensus 26 ~~~s~~~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~--~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~--- 100 (283)
T 4b6g_A 26 AHHAQTLQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQNFIT--KSGFQRYAAEHQVIVVAPDTSPRGEQVPNDD--- 100 (283)
T ss_dssp EEEETTTTEEEEEEEEECCCTTCCCEEEEEEECCTTCCSHHHHH--HSCTHHHHHHHTCEEEEECSSCCSTTSCCCS---
T ss_pred EEechhhCCceEEEEEeCCCCCCCCCCEEEEEcCCCCCccchhh--cccHHHHHhhCCeEEEEeccccccccccccc---
Confidence 33335678889999998876433456899999999988877731 0235677778899999999865554321110
Q ss_pred cccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCC
Q 011833 149 DSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWD 228 (476)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (476)
.-..|.+..+..... ..| + ...+.
T Consensus 101 --------~~~~G~g~~~~~~~~-------------------------~~~---------------~--------~~~~~ 124 (283)
T 4b6g_A 101 --------AYDLGQSAGFYLNAT-------------------------EQP---------------W--------AANYQ 124 (283)
T ss_dssp --------STTSBTTBCTTSBCC-------------------------STT---------------G--------GGTCB
T ss_pred --------cccccCCCcccccCc-------------------------cCc---------------c--------cchhh
Confidence 000121111111100 000 0 00123
Q ss_pred chhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 229 FDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 229 ~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
+.+++.+|+...++ +.... .++++++||||||.+++.++.++| ..+++++++++..+.
T Consensus 125 ~~~~~~~~~~~~i~---~~~~~-~~~~~l~G~S~GG~~a~~~a~~~p-----~~~~~~~~~s~~~~~ 182 (283)
T 4b6g_A 125 MYDYILNELPRLIE---KHFPT-NGKRSIMGHSMGGHGALVLALRNQ-----ERYQSVSAFSPILSP 182 (283)
T ss_dssp HHHHHHTHHHHHHH---HHSCE-EEEEEEEEETHHHHHHHHHHHHHG-----GGCSCEEEESCCCCG
T ss_pred HHHHHHHHHHHHHH---HhCCC-CCCeEEEEEChhHHHHHHHHHhCC-----ccceeEEEECCcccc
Confidence 34444455544444 44322 258999999999999999999987 889999999987653
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.60 E-value=6.6e-15 Score=161.93 Aligned_cols=150 Identities=13% Similarity=0.067 Sum_probs=101.3
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcc---eeecC---CCCCHH-HHHHhCCCcEEEecCCCCC
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAI---GYDLS---PEYSFA-RYMSGQGFDTWILEVRGAG 138 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~---~~~~~---~~~~l~-~~L~~~Gy~V~~~D~rG~G 138 (476)
+...+. +.||.+|.++.|.|... ++.|+||++||++.... .|... ...... ++|+++||.|+.+|+||+|
T Consensus 38 ~~v~i~-~~DG~~L~~~l~~P~~~--~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g 114 (652)
T 2b9v_A 38 REVMVP-MRDGVKLYTVIVIPKNA--RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKY 114 (652)
T ss_dssp EEEEEE-CTTSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTST
T ss_pred EEEEEE-CCCCcEEEEEEEecCCC--CCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCC
Confidence 344555 68999999999988643 34577888898875421 11000 001123 8899999999999999999
Q ss_pred CcccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhh
Q 011833 139 LSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQ 218 (476)
Q Consensus 139 ~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (476)
.|.+..... . | ..
T Consensus 115 ~S~g~~~~~-------------------~-------------------------------~-----------~~------ 127 (652)
T 2b9v_A 115 GSQGDYVMT-------------------R-------------------------------P-----------PH------ 127 (652)
T ss_dssp TCCSCCCTT-------------------C-------------------------------C-----------CS------
T ss_pred CCCCccccc-------------------c-------------------------------c-----------cc------
Confidence 996532100 0 0 00
Q ss_pred hhcccccCCC-chhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 219 LDLIVKNDWD-FDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 219 ~~~~~~~~~~-~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
.+|. ++....+|+.++++++.++....+++|.++||||||.+++.+++..| .+++++|.+++..++.
T Consensus 128 ------~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~-----~~lka~v~~~~~~d~~ 195 (652)
T 2b9v_A 128 ------GPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPH-----PALKVAAPESPMVDGW 195 (652)
T ss_dssp ------BTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCC-----TTEEEEEEEEECCCTT
T ss_pred ------ccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCC-----CceEEEEecccccccc
Confidence 0011 00012379999999998872222359999999999999999998766 7899999999987743
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.3e-15 Score=150.48 Aligned_cols=107 Identities=20% Similarity=0.355 Sum_probs=76.6
Q ss_pred CCcEEEecCCCCCc---ceeecCCCCCHHHHHHhC--CCcEEEecCCCCCCcccccccCccccccccccccCCCcccccc
Q 011833 94 NHPLLLLSGIGTNA---IGYDLSPEYSFARYMSGQ--GFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRE 168 (476)
Q Consensus 94 ~~~VlllHG~~~~~---~~~~~~~~~~l~~~L~~~--Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 168 (476)
.+||||+||++++. ..| ..+++.|++. |+.|+++|+ |+|.|.....
T Consensus 5 ~~pvVllHG~~~~~~~~~~~-----~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~----------------------- 55 (279)
T 1ei9_A 5 PLPLVIWHGMGDSCCNPLSM-----GAIKKMVEKKIPGIHVLSLEI-GKTLREDVEN----------------------- 55 (279)
T ss_dssp SCCEEEECCTTCCSCCTTTT-----HHHHHHHHHHSTTCCEEECCC-SSSHHHHHHH-----------------------
T ss_pred CCcEEEECCCCCCCCCcccH-----HHHHHHHHHHCCCcEEEEEEe-CCCCcccccc-----------------------
Confidence 46799999999887 678 5789999875 889999998 9998742110
Q ss_pred cchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHh
Q 011833 169 SQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLS 248 (476)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~ 248 (476)
.| ..++ .+++..+++.+....
T Consensus 56 ---------------------------------------------~~----------~~~~----~~~~~~~~~~l~~~~ 76 (279)
T 1ei9_A 56 ---------------------------------------------SF----------FLNV----NSQVTTVCQILAKDP 76 (279)
T ss_dssp ---------------------------------------------HH----------HSCH----HHHHHHHHHHHHSCG
T ss_pred ---------------------------------------------cc----------ccCH----HHHHHHHHHHHHhhh
Confidence 00 0011 134445555554422
Q ss_pred CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 249 KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 249 ~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
+. .+++++|||||||.++..++.++| ..+|+++|+++++.
T Consensus 77 ~l-~~~~~lvGhSmGG~ia~~~a~~~~----~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 77 KL-QQGYNAMGFSQGGQFLRAVAQRCP----SPPMVNLISVGGQH 116 (279)
T ss_dssp GG-TTCEEEEEETTHHHHHHHHHHHCC----SSCEEEEEEESCCT
T ss_pred hc-cCCEEEEEECHHHHHHHHHHHHcC----CcccceEEEecCcc
Confidence 11 148999999999999999999987 23599999998754
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=4.4e-14 Score=152.69 Aligned_cols=137 Identities=14% Similarity=0.111 Sum_probs=101.8
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcc-eee-------------cCCC----CCHHHHHHhCCCcE
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAI-GYD-------------LSPE----YSFARYMSGQGFDT 129 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~-~~~-------------~~~~----~~l~~~L~~~Gy~V 129 (476)
..+. ..||.+|.++.|.|... ++.|+||+.||++.+.. .+. .... ...++.|+++||.|
T Consensus 44 v~i~-~~DG~~L~a~l~~P~~~--~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~v 120 (560)
T 3iii_A 44 GTVE-MRDGEKLYINIFRPNKD--GKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVV 120 (560)
T ss_dssp EEEE-CTTSCEEEEEEEECSSS--SCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEE
T ss_pred EEEE-CCCCcEEEEEEEecCCC--CCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEE
Confidence 3455 67999999999988753 45688999999988742 110 0000 12378999999999
Q ss_pred EEecCCCCCCcccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhcc
Q 011833 130 WILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLS 209 (476)
Q Consensus 130 ~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (476)
+++|+||+|.|.+...
T Consensus 121 v~~D~RG~G~S~G~~~---------------------------------------------------------------- 136 (560)
T 3iii_A 121 VKVALRGSDKSKGVLS---------------------------------------------------------------- 136 (560)
T ss_dssp EEEECTTSTTCCSCBC----------------------------------------------------------------
T ss_pred EEEcCCCCCCCCCccc----------------------------------------------------------------
Confidence 9999999999965321
Q ss_pred chhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEe
Q 011833 210 TSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTL 289 (476)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvll 289 (476)
.+ .....+|+.++++++.++... +++|.++||||||.+++.+|+..| ..++++|..
T Consensus 137 ----------------~~--~~~~~~D~~~~i~~l~~~~~~-~~~igl~G~S~GG~~al~~a~~~p-----~~l~aiv~~ 192 (560)
T 3iii_A 137 ----------------PW--SKREAEDYYEVIEWAANQSWS-NGNIGTNGVSYLAVTQWWVASLNP-----PHLKAMIPW 192 (560)
T ss_dssp ----------------TT--SHHHHHHHHHHHHHHHTSTTE-EEEEEEEEETHHHHHHHHHHTTCC-----TTEEEEEEE
T ss_pred ----------------cC--ChhHHHHHHHHHHHHHhCCCC-CCcEEEEccCHHHHHHHHHHhcCC-----CceEEEEec
Confidence 01 101247999999999876433 268999999999999999999876 789999999
Q ss_pred cccccc
Q 011833 290 ASSLDY 295 (476)
Q Consensus 290 a~~~~~ 295 (476)
++..++
T Consensus 193 ~~~~d~ 198 (560)
T 3iii_A 193 EGLNDM 198 (560)
T ss_dssp SCCCBH
T ss_pred CCcccc
Confidence 987663
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1e-13 Score=138.21 Aligned_cols=66 Identities=17% Similarity=0.183 Sum_probs=48.5
Q ss_pred CCCCcccEEEEeeCCCCcCCHHH-HHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 399 IGKTNVPVLALAADQDLICPTEA-VYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 399 l~~i~vPvLii~G~~D~~vp~~~-~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
...+++|+++++| +|.+++++. ...+.+.++. ..+++++ + ++|+.++ .+.++.+.+.|.+||++..
T Consensus 246 ~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~~-~~~~~~v-----~-g~H~~~~--~e~~~~~~~~i~~~L~~~~ 312 (319)
T 2hfk_A 246 PGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWDL-PHTVADV-----P-GDHFTMM--RDHAPAVAEAVLSWLDAIE 312 (319)
T ss_dssp CCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCSS-CSEEEEE-----S-SCTTHHH--HTCHHHHHHHHHHHHHHHH
T ss_pred CCCcCCCEEEEEc-CCCCCCccccccchhhcCCC-CCEEEEe-----C-CCcHHHH--HHhHHHHHHHHHHHHHhcC
Confidence 4678999999999 999988765 4444444443 3466666 5 6996643 2467899999999998753
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.50 E-value=3.3e-14 Score=142.87 Aligned_cols=102 Identities=15% Similarity=0.175 Sum_probs=77.0
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
.+++||++||++++...| ..++..| ..+|.|+++|+||+|.+....
T Consensus 100 ~~~~l~~lhg~~~~~~~~-----~~l~~~L-~~~~~v~~~d~~g~~~~~~~~---------------------------- 145 (329)
T 3tej_A 100 NGPTLFCFHPASGFAWQF-----SVLSRYL-DPQWSIIGIQSPRPNGPMQTA---------------------------- 145 (329)
T ss_dssp SSCEEEEECCTTSCCGGG-----GGGGGTS-CTTCEEEEECCCTTTSHHHHC----------------------------
T ss_pred CCCcEEEEeCCcccchHH-----HHHHHhc-CCCCeEEEeeCCCCCCCCCCC----------------------------
Confidence 468999999999999999 5788888 467999999999998764211
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
.++++++ +++ ++.+.+....
T Consensus 146 ------------------------------------------------------~~~~~~a-~~~---~~~i~~~~~~-- 165 (329)
T 3tej_A 146 ------------------------------------------------------ANLDEVC-EAH---LATLLEQQPH-- 165 (329)
T ss_dssp ------------------------------------------------------SSHHHHH-HHH---HHHHHHHCSS--
T ss_pred ------------------------------------------------------CCHHHHH-HHH---HHHHHHhCCC--
Confidence 1233333 333 3444444332
Q ss_pred CcEeEEEEchHHHHHHHHHhc---CCCCCCcccccEEEEecccc
Q 011833 253 GKLLAVGHSMGGILLYAMLSH---CGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~---~p~~~~~~~v~~lvlla~~~ 293 (476)
++++++||||||.+++.+|.+ +| .+|++++++++..
T Consensus 166 ~~~~l~G~S~Gg~ia~~~a~~L~~~~-----~~v~~lvl~d~~~ 204 (329)
T 3tej_A 166 GPYYLLGYSLGGTLAQGIAARLRARG-----EQVAFLGLLDTWP 204 (329)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTT-----CCEEEEEEESCCC
T ss_pred CCEEEEEEccCHHHHHHHHHHHHhcC-----CcccEEEEeCCCC
Confidence 489999999999999999988 76 7899999998754
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.5e-13 Score=133.25 Aligned_cols=59 Identities=14% Similarity=0.202 Sum_probs=47.3
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
++||+++||++|+++|.+.++++.+.+... .++++.+ ++.||- . ..+..+.+.+||++.
T Consensus 183 ~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y-----~g~gH~---i----~~~~l~~~~~fL~k~ 243 (246)
T 4f21_A 183 GLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHY-----VGMQHS---V----CMEEIKDISNFIAKT 243 (246)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEE-----SSCCSS---C----CHHHHHHHHHHHHHH
T ss_pred CCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEE-----CCCCCc---c----CHHHHHHHHHHHHHH
Confidence 679999999999999999999888887653 4677776 899992 1 244578899999874
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.1e-13 Score=139.24 Aligned_cols=105 Identities=18% Similarity=0.215 Sum_probs=84.0
Q ss_pred CCCcEEEecCCCCCc-ceeecCCCC-CHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccc
Q 011833 93 RNHPLLLLSGIGTNA-IGYDLSPEY-SFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQ 170 (476)
Q Consensus 93 ~~~~VlllHG~~~~~-~~~~~~~~~-~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 170 (476)
.+++|||+||++++. ..| . .+++.|.++||+|+++|+||||.++...
T Consensus 64 ~~~pVVLvHG~~~~~~~~w-----~~~l~~~L~~~Gy~V~a~DlpG~G~~~~~~-------------------------- 112 (316)
T 3icv_A 64 VSKPILLVPGTGTTGPQSF-----DSNWIPLSAQLGYTPCWISPPPFMLNDTQV-------------------------- 112 (316)
T ss_dssp CSSEEEEECCTTCCHHHHH-----TTTHHHHHHHTTCEEEEECCTTTTCSCHHH--------------------------
T ss_pred CCCeEEEECCCCCCcHHHH-----HHHHHHHHHHCCCeEEEecCCCCCCCcHHH--------------------------
Confidence 468999999999997 678 5 8999999999999999999999763211
Q ss_pred hhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCC
Q 011833 171 SKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKP 250 (476)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~ 250 (476)
..+++.+.++.+.+..+.
T Consensus 113 --------------------------------------------------------------~~~~la~~I~~l~~~~g~ 130 (316)
T 3icv_A 113 --------------------------------------------------------------NTEYMVNAITTLYAGSGN 130 (316)
T ss_dssp --------------------------------------------------------------HHHHHHHHHHHHHHHTTS
T ss_pred --------------------------------------------------------------HHHHHHHHHHHHHHHhCC
Confidence 125677788888887765
Q ss_pred CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 251 KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 251 ~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
+ ++++|||||||.++..++..+| +...+|+++|+++++..
T Consensus 131 ~--~v~LVGHSmGGlvA~~al~~~p--~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 131 N--KLPVLTWSQGGLVAQWGLTFFP--SIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp C--CEEEEEETHHHHHHHHHHHHCG--GGTTTEEEEEEESCCTT
T ss_pred C--ceEEEEECHHHHHHHHHHHhcc--ccchhhceEEEECCCCC
Confidence 4 8999999999999977776643 01278999999998764
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.48 E-value=2.8e-13 Score=127.45 Aligned_cols=67 Identities=13% Similarity=0.104 Sum_probs=47.0
Q ss_pred cCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 398 HIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 398 ~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
...++++|+++++|++|.++|. ....+.+..+. .++++++ ++ ||..++ ..+.++.+...|.+||+++
T Consensus 163 ~~~~~~~P~l~i~g~~D~~~~~-~~~~w~~~~~~-~~~~~~i-----~g-~H~~~~-~~~~~~~~~~~i~~~l~~~ 229 (230)
T 1jmk_C 163 STGQVKADIDLLTSGADFDIPE-WLASWEEATTG-AYRMKRG-----FG-THAEML-QGETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp CCSCBSSEEEEEECSSCCCCCT-TEECSGGGBSS-CEEEEEC-----SS-CGGGTT-SHHHHHHHHHHHHHHHTCB
T ss_pred ccccccccEEEEEeCCCCCCcc-ccchHHHhcCC-CeEEEEe-----cC-ChHHHc-CcHhHHHHHHHHHHHHhhc
Confidence 4567899999999999999873 33333344433 3567776 65 996654 3455688899999999764
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-12 Score=130.14 Aligned_cols=145 Identities=14% Similarity=0.169 Sum_probs=91.0
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCC--CCCcceeecCCCCCHHHHHHhCCCcEEEecCCCC-CCccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGI--GTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGA-GLSAH 142 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~--~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~-G~S~~ 142 (476)
+...+.-...|..+.++ ++|.. .+.|+|||+||+ +++...|.. ...+.+.+.+.|+.|+++|.++. +.++.
T Consensus 10 ~~~~~~S~~~~~~i~v~-~~p~~---~~~p~vvllHG~~~~~~~~~w~~--~~~~~~~~~~~~~~vv~p~~~~~~~~~~~ 83 (304)
T 1sfr_A 10 EYLQVPSPSMGRDIKVQ-FQSGG---ANSPALYLLDGLRAQDDFSGWDI--NTPAFEWYDQSGLSVVMPVGGQSSFYSDW 83 (304)
T ss_dssp EEEEEEETTTTEEEEEE-EECCS---TTBCEEEEECCTTCCSSSCHHHH--HCCHHHHHTTSSCEEEEECCCTTCTTCBC
T ss_pred EEEEEECccCCCceEEE-ECCCC---CCCCEEEEeCCCCCCCCcchhhc--CCCHHHHHhcCCeEEEEECCCCCcccccc
Confidence 34444423457778877 65543 346889999999 566666631 01245677788999999999764 22211
Q ss_pred ccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLI 222 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (476)
... . +. .+
T Consensus 84 ~~~------------------------~----------------------------~~-~g------------------- 91 (304)
T 1sfr_A 84 YQP------------------------A----------------------------CG-KA------------------- 91 (304)
T ss_dssp SSC------------------------E----------------------------EE-TT-------------------
T ss_pred CCc------------------------c----------------------------cc-cc-------------------
Confidence 000 0 00 00
Q ss_pred cccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 223 VKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 223 ~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
....+++++++.+|+..+++ +..+.+.++++++||||||.+++.++.++| .++++++++++..+..
T Consensus 92 ~~~~~~~~~~~~~~l~~~i~---~~~~~~~~~~~l~G~S~GG~~al~~a~~~p-----~~~~~~v~~sg~~~~~ 157 (304)
T 1sfr_A 92 GCQTYKWETFLTSELPGWLQ---ANRHVKPTGSAVVGLSMAASSALTLAIYHP-----QQFVYAGAMSGLLDPS 157 (304)
T ss_dssp EEECCBHHHHHHTHHHHHHH---HHHCBCSSSEEEEEETHHHHHHHHHHHHCT-----TTEEEEEEESCCSCTT
T ss_pred ccccccHHHHHHHHHHHHHH---HHCCCCCCceEEEEECHHHHHHHHHHHhCc-----cceeEEEEECCccCcc
Confidence 00013344444455554444 444444458999999999999999999988 8899999999876543
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.45 E-value=4.8e-14 Score=147.76 Aligned_cols=111 Identities=11% Similarity=0.126 Sum_probs=87.0
Q ss_pred CCCcEEEecCCCCCc-ceeecCCCCCHHHHHHh-CCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccc
Q 011833 93 RNHPLLLLSGIGTNA-IGYDLSPEYSFARYMSG-QGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQ 170 (476)
Q Consensus 93 ~~~~VlllHG~~~~~-~~~~~~~~~~l~~~L~~-~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 170 (476)
.+++||++||++++. ..|. ..+++.|++ .||+|+++|+||+|.|.....
T Consensus 69 ~~~~vvllHG~~~s~~~~w~----~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~~------------------------- 119 (432)
T 1gpl_A 69 NRKTRFIIHGFTDSGENSWL----SDMCKNMFQVEKVNCICVDWKGGSKAQYSQA------------------------- 119 (432)
T ss_dssp TSEEEEEECCTTCCTTSHHH----HHHHHHHHHHCCEEEEEEECHHHHTSCHHHH-------------------------
T ss_pred CCCeEEEECCCCCCCCchHH----HHHHHHHHhcCCcEEEEEECccccCccchhh-------------------------
Confidence 468999999999988 5773 127788876 799999999999998852110
Q ss_pred hhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCC
Q 011833 171 SKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKP 250 (476)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~ 250 (476)
. ++++++ .+|+.++++++.+..+.
T Consensus 120 --------------------------------------~-----------------~~~~~~-~~dl~~~i~~l~~~~g~ 143 (432)
T 1gpl_A 120 --------------------------------------S-----------------QNIRVV-GAEVAYLVQVLSTSLNY 143 (432)
T ss_dssp --------------------------------------H-----------------HHHHHH-HHHHHHHHHHHHHHHCC
T ss_pred --------------------------------------H-----------------hhHHHH-HHHHHHHHHHHHHhcCC
Confidence 0 111222 37999999999877765
Q ss_pred CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 251 KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 251 ~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
+.+++++|||||||.+++.++.++| .+|+++++++|..
T Consensus 144 ~~~~i~lvGhSlGg~vA~~~a~~~p-----~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 144 APENVHIIGHSLGAHTAGEAGKRLN-----GLVGRITGLDPAE 181 (432)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHTTT-----TCSSEEEEESCBC
T ss_pred CcccEEEEEeCHHHHHHHHHHHhcc-----cccceeEEecccc
Confidence 4569999999999999999999887 7799999998764
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2.7e-13 Score=130.17 Aligned_cols=68 Identities=13% Similarity=0.026 Sum_probs=47.0
Q ss_pred cCCCCcccEEEEeeC--CCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 398 HIGKTNVPVLALAAD--QDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 398 ~l~~i~vPvLii~G~--~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
...++++|+++++|+ +|.+ +++....+.+.++. ..+++++ ++ ||..++ ..+.++.+.+.|.+||++..
T Consensus 157 ~~~~i~~Pvl~i~g~~~~D~~-~~~~~~~w~~~~~~-~~~~~~i-----~g-gH~~~~-~~~~~~~~~~~i~~~L~~~~ 226 (244)
T 2cb9_A 157 NEGRIKSNIHFIEAGIQTETS-GAMVLQKWQDAAEE-GYAEYTG-----YG-AHKDML-EGEFAEKNANIILNILDKIN 226 (244)
T ss_dssp CCSCBSSEEEEEECSBCSCCC-HHHHTTSSGGGBSS-CEEEEEC-----SS-BGGGTT-SHHHHHHHHHHHHHHHHTC-
T ss_pred cCCCcCCCEEEEEccCccccc-cccchhHHHHhcCC-CCEEEEe-----cC-ChHHHc-ChHHHHHHHHHHHHHHhcCc
Confidence 356789999999999 8874 44444444444443 3567776 64 996654 23557889999999998653
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2e-13 Score=144.12 Aligned_cols=142 Identities=16% Similarity=0.187 Sum_probs=87.3
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCC---cEEEecCCCCCCcc---cccccCccccccccccccCCCccc
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGF---DTWILEVRGAGLSA---HRVEFGEDSMITSANAKSTGGTTL 165 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy---~V~~~D~rG~G~S~---~~~~~~~~~~~~~~~~~~~g~~~~ 165 (476)
..+++|||+||++++...| ..+++.|+++|| +|+++|+||+|.|. ....+ .|....
T Consensus 20 ~~~ppVVLlHG~g~s~~~w-----~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~-------------~G~~~~ 81 (484)
T 2zyr_A 20 EDFRPVVFVHGLAGSAGQF-----ESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLF-------------SGLGSE 81 (484)
T ss_dssp -CCCCEEEECCTTCCGGGG-----HHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTT-------------TTGGGH
T ss_pred CCCCEEEEECCCCCCHHHH-----HHHHHHHHHcCCCcceEEEEECCCCCccccccccccc-------------cccccc
Confidence 3578999999999999999 589999999999 89999999999871 00000 010000
Q ss_pred ccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHH
Q 011833 166 SRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIR 245 (476)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~ 245 (476)
.+.+..+ ..+ |..+ ....+..+.. ++.. ..+++.+.++.+.
T Consensus 82 ~G~n~~p----------------~id-------~~~l-~~v~~~~~~~--------------~~~~-~~~dla~~L~~ll 122 (484)
T 2zyr_A 82 FGLNISQ----------------IID-------PETL-DKILSKSRER--------------LIDE-TFSRLDRVIDEAL 122 (484)
T ss_dssp HHHHHGG----------------GSC-------HHHH-HHHHTSCHHH--------------HHHH-HHHHHHHHHHHHH
T ss_pred ccccccc----------------ccc-------cccc-cccccccccC--------------chhh-hHHHHHHHHHHHH
Confidence 0000000 000 0000 0000000000 0111 2357777777777
Q ss_pred HHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 246 TLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 246 ~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
+..+.+ ++++|||||||.+++.++.++| +...+|+++|+++++..
T Consensus 123 ~~lg~~--kV~LVGHSmGG~IAl~~A~~~P--e~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 123 AESGAD--KVDLVGHSMGTFFLVRYVNSSP--ERAAKVAHLILLDGVWG 167 (484)
T ss_dssp HHHCCS--CEEEEEETHHHHHHHHHHHTCH--HHHHTEEEEEEESCCCS
T ss_pred HHhCCC--CEEEEEECHHHHHHHHHHHHCc--cchhhhCEEEEECCccc
Confidence 777654 8999999999999999999875 00147999999998753
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.43 E-value=9.3e-13 Score=129.06 Aligned_cols=36 Identities=25% Similarity=0.353 Sum_probs=31.4
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCC
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRG 136 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG 136 (476)
.+++||++||++++...| ..++..|. +.|+++|++|
T Consensus 23 ~~~~l~~~hg~~~~~~~~-----~~~~~~L~---~~v~~~d~~~ 58 (283)
T 3tjm_A 23 SERPLFLVHPIEGSTTVF-----HSLASRLS---IPTYGLQCTR 58 (283)
T ss_dssp SSCCEEEECCTTCCSGGG-----HHHHHHCS---SCEEEECCCT
T ss_pred CCCeEEEECCCCCCHHHH-----HHHHHhcC---ceEEEEecCC
Confidence 468999999999999999 57888885 9999999965
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=3.4e-12 Score=134.57 Aligned_cols=63 Identities=17% Similarity=0.130 Sum_probs=50.8
Q ss_pred CCCcccEEEEeeCCCCcCCHHHHHHHHHhcCC--CceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 400 GKTNVPVLALAADQDLICPTEAVYETVKLIPE--HLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 400 ~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~--~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
.++++|+|++||++|.++|.+.++++++.+.. ..++++++ ++.+|.... ..-++.+++||+++
T Consensus 341 ~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y-----~~~~H~~~~------~~~~~d~l~WL~~r 405 (462)
T 3guu_A 341 SVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPY-----PIAEHLTAE------IFGLVPSLWFIKQA 405 (462)
T ss_dssp CCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEE-----SSCCHHHHH------HHTHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEE-----CcCCccCch------hhhHHHHHHHHHHH
Confidence 46789999999999999999999999998753 45788887 889995432 23478999999864
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.41 E-value=5e-13 Score=138.01 Aligned_cols=157 Identities=13% Similarity=0.165 Sum_probs=102.8
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceee-------------cCCCCCHHHHHHhCCCcEEEecC
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYD-------------LSPEYSFARYMSGQGFDTWILEV 134 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~-------------~~~~~~l~~~L~~~Gy~V~~~D~ 134 (476)
..+. +.+|..+.++.|.|... .++.|+||++||.+++...+. .+....+++.|+++||.|+++|+
T Consensus 95 v~~~-~~~g~~l~~~l~~P~~~-~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~ 172 (398)
T 3nuz_A 95 WEFY-PLPKCVSTFLVLIPDNI-NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDN 172 (398)
T ss_dssp EEEC-CSTTBCEEEEEEEESSC-CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECC
T ss_pred EEEE-cCCCcEEEEEEEeCCCC-CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEecC
Confidence 3444 56899999999988653 345789999999988654210 00012689999999999999999
Q ss_pred CCCCCcccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhH
Q 011833 135 RGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLED 214 (476)
Q Consensus 135 rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (476)
||+|.|....... .| .++.. +.
T Consensus 173 rG~G~s~~~~~~~------------~~--~~~~~--------------------------------------------~~ 194 (398)
T 3nuz_A 173 PAAGEASDLERYT------------LG--SNYDY--------------------------------------------DV 194 (398)
T ss_dssp TTSGGGCSSGGGT------------TT--TSCCH--------------------------------------------HH
T ss_pred CCCCccccccccc------------cc--cccch--------------------------------------------hh
Confidence 9999986432100 00 00000 00
Q ss_pred HHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 215 FQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
+...+.. ...++..+...|+.++++++.++...+.++|.++||||||.+++.+++.. .+|+++|..+...
T Consensus 195 ~~~~~~~---~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~------~~i~a~v~~~~~~ 264 (398)
T 3nuz_A 195 VSRYLLE---LGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLD------TSIYAFVYNDFLC 264 (398)
T ss_dssp HHHHHHH---TTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHC------TTCCEEEEESCBC
T ss_pred hhhHHhh---cCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcC------CcEEEEEEecccc
Confidence 0000000 01223333457999999999877555556899999999999999888763 6788988876543
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.39 E-value=3.1e-12 Score=125.37 Aligned_cols=135 Identities=16% Similarity=0.209 Sum_probs=89.4
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCC--CCcceeecCCCCCHHHHHHhCCCcEEEecCCCCC-Cccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIG--TNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAG-LSAH 142 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~--~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G-~S~~ 142 (476)
+...+.-..+|..+.++ |.|.. .|+|||+||++ .+...|.. ...+.+.+++.|+.|+++|.++.+ .++.
T Consensus 12 ~~~~~~S~~~~~~~~~~-~~P~~-----~p~vvllHG~~~~~~~~~w~~--~~~~~~~~~~~~~~vv~pd~~~~~~~~~~ 83 (280)
T 1r88_A 12 ENLMVPSPSMGRDIPVA-FLAGG-----PHAVYLLDAFNAGPDVSNWVT--AGNAMNTLAGKGISVVAPAGGAYSMYTNW 83 (280)
T ss_dssp EEEEEEETTTTEEEEEE-EECCS-----SSEEEEECCSSCCSSSCHHHH--TSCHHHHHTTSSSEEEEECCCTTSTTSBC
T ss_pred EEEEEECcccCCcceEE-EeCCC-----CCEEEEECCCCCCCChhhhhh--cccHHHHHhcCCeEEEEECCCCCCccCCC
Confidence 44444434578888888 76643 37999999995 45555631 013567788889999999997642 2110
Q ss_pred ccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLI 222 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (476)
... .
T Consensus 84 ~~~------------------------~---------------------------------------------------- 87 (280)
T 1r88_A 84 EQD------------------------G---------------------------------------------------- 87 (280)
T ss_dssp SSC------------------------T----------------------------------------------------
T ss_pred CCC------------------------C----------------------------------------------------
Confidence 000 0
Q ss_pred cccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 223 VKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 223 ~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
.-.++++..+|+..+++ +..+.+.++++++||||||.+++.++.++| +++++++++++..+.
T Consensus 88 ---~~~~~~~~~~~l~~~i~---~~~~~~~~~~~l~G~S~GG~~al~~a~~~p-----~~~~~~v~~sg~~~~ 149 (280)
T 1r88_A 88 ---SKQWDTFLSAELPDWLA---ANRGLAPGGHAAVGAAQGGYGAMALAAFHP-----DRFGFAGSMSGFLYP 149 (280)
T ss_dssp ---TCBHHHHHHTHHHHHHH---HHSCCCSSCEEEEEETHHHHHHHHHHHHCT-----TTEEEEEEESCCCCT
T ss_pred ---CCcHHHHHHHHHHHHHH---HHCCCCCCceEEEEECHHHHHHHHHHHhCc-----cceeEEEEECCccCc
Confidence 00122333455555444 444444458999999999999999999988 889999999987654
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.38 E-value=1.8e-12 Score=130.55 Aligned_cols=102 Identities=21% Similarity=0.271 Sum_probs=79.2
Q ss_pred CCCcEEEecCCCCCc------ceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccc
Q 011833 93 RNHPLLLLSGIGTNA------IGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLS 166 (476)
Q Consensus 93 ~~~~VlllHG~~~~~------~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~ 166 (476)
.+++|||+||++++. ..| ..+++.|.++||.|+++|+||+|.|....
T Consensus 7 ~~~~vVlvHG~~~~~~~~~~~~~w-----~~l~~~L~~~G~~V~~~d~~g~g~s~~~~---------------------- 59 (320)
T 1ys1_X 7 TRYPIILVHGLTGTDKYAGVLEYW-----YGIQEDLQQRGATVYVANLSGFQSDDGPN---------------------- 59 (320)
T ss_dssp CSSCEEEECCTTCCSEETTTEESS-----TTHHHHHHHTTCCEEECCCCSSCCSSSTT----------------------
T ss_pred CCCEEEEECCCCCCccccchHHHH-----HHHHHHHHhCCCEEEEEcCCCCCCCCCCC----------------------
Confidence 478999999999887 667 68999999999999999999999884421
Q ss_pred cccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHH
Q 011833 167 RESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRT 246 (476)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~ 246 (476)
.+.+++. +|+.++++
T Consensus 60 ------------------------------------------------------------~~~~~l~-~~i~~~l~---- 74 (320)
T 1ys1_X 60 ------------------------------------------------------------GRGEQLL-AYVKTVLA---- 74 (320)
T ss_dssp ------------------------------------------------------------SHHHHHH-HHHHHHHH----
T ss_pred ------------------------------------------------------------CCHHHHH-HHHHHHHH----
Confidence 0111112 34444443
Q ss_pred HhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 247 LSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 247 ~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
..+. +++++|||||||.++..++.++| .+|+++|+++++.
T Consensus 75 ~~~~--~~v~lvGHS~GG~va~~~a~~~p-----~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 75 ATGA--TKVNLVGHSQGGLTSRYVAAVAP-----DLVASVTTIGTPH 114 (320)
T ss_dssp HHCC--SCEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCT
T ss_pred HhCC--CCEEEEEECHhHHHHHHHHHhCh-----hhceEEEEECCCC
Confidence 4343 38999999999999999999877 7899999999864
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.37 E-value=1.1e-12 Score=133.30 Aligned_cols=113 Identities=17% Similarity=0.255 Sum_probs=85.5
Q ss_pred CCCcEEEecCCCCCcc----------eeecCCCCCHHHHHHhCCCc---EEEecCCCCCCcccccccCcccccccccccc
Q 011833 93 RNHPLLLLSGIGTNAI----------GYDLSPEYSFARYMSGQGFD---TWILEVRGAGLSAHRVEFGEDSMITSANAKS 159 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~----------~~~~~~~~~l~~~L~~~Gy~---V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~ 159 (476)
.++||||+||+++++. .|...+ ..+++.|.++||. |+++|+||+|.|......
T Consensus 39 ~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~-~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~------------- 104 (342)
T 2x5x_A 39 TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPA-RSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYN------------- 104 (342)
T ss_dssp CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCS-SCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGC-------------
T ss_pred CCCeEEEECCcCCCcccccccccccccccccH-HHHHHHHHhCCCCCCeEEEEeCCCCCccCCcccc-------------
Confidence 4688999999998643 341000 4789999999998 999999999987542210
Q ss_pred CCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHH
Q 011833 160 TGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPA 239 (476)
Q Consensus 160 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a 239 (476)
...+ +..+++.+
T Consensus 105 -------------------------------------------------------------------~~~~-~~~~~l~~ 116 (342)
T 2x5x_A 105 -------------------------------------------------------------------YHSS-TKYAIIKT 116 (342)
T ss_dssp -------------------------------------------------------------------CBCH-HHHHHHHH
T ss_pred -------------------------------------------------------------------CCHH-HHHHHHHH
Confidence 0111 12367778
Q ss_pred HHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC--CCCCCcccccEEEEeccccc
Q 011833 240 VMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC--GFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 240 ~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~--p~~~~~~~v~~lvlla~~~~ 294 (476)
.++.+.+..+.+ ++++|||||||.+++.++.++ | .+|+++|+++++..
T Consensus 117 ~I~~l~~~~g~~--~v~LVGHSmGG~iA~~~a~~~~~p-----~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 117 FIDKVKAYTGKS--QVDIVAHSMGVSMSLATLQYYNNW-----TSVRKFINLAGGIR 166 (342)
T ss_dssp HHHHHHHHHTCS--CEEEEEETHHHHHHHHHHHHHTCG-----GGEEEEEEESCCTT
T ss_pred HHHHHHHHhCCC--CEEEEEECHHHHHHHHHHHHcCch-----hhhcEEEEECCCcc
Confidence 888887777654 899999999999999999987 5 78999999998754
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.37 E-value=3e-13 Score=142.61 Aligned_cols=112 Identities=8% Similarity=0.053 Sum_probs=86.4
Q ss_pred CCCCcEEEecCCCCCc-ceeecCCCCCHHHHHHhC-CCcEEEecCCCCCCcccccccCccccccccccccCCCccccccc
Q 011833 92 QRNHPLLLLSGIGTNA-IGYDLSPEYSFARYMSGQ-GFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRES 169 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~-~~~~~~~~~~l~~~L~~~-Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 169 (476)
..+++|||+||++++. ..|. ..++..|.++ ||+|+++|+||+|.|.....
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~----~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~~------------------------ 119 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRGEDSWP----SDMCKKILQVETTNCISVDWSSGAKAEYTQA------------------------ 119 (452)
T ss_dssp TTSCEEEEECCTTCCSSSSHH----HHHHHHHHTTSCCEEEEEECHHHHTSCHHHH------------------------
T ss_pred CCCCEEEEEcCCCCCCCchHH----HHHHHHHHhhCCCEEEEEecccccccccHHH------------------------
Confidence 3578999999999888 5673 2267777765 99999999999999852110
Q ss_pred chhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhC
Q 011833 170 QSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSK 249 (476)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~ 249 (476)
.++++++ .+|+.++++++.+..+
T Consensus 120 --------------------------------------------------------~~~~~~~-~~dl~~~i~~L~~~~g 142 (452)
T 1w52_X 120 --------------------------------------------------------VQNIRIV-GAETAYLIQQLLTELS 142 (452)
T ss_dssp --------------------------------------------------------HHHHHHH-HHHHHHHHHHHHHHHC
T ss_pred --------------------------------------------------------HHhHHHH-HHHHHHHHHHHHHhcC
Confidence 0111222 3789999999987666
Q ss_pred CCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 250 PKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 250 ~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
.+.+++++|||||||.+++.++.++| .+|+++|+++|..
T Consensus 143 ~~~~~i~LvGhSlGg~vA~~~a~~~p-----~~v~~iv~ldpa~ 181 (452)
T 1w52_X 143 YNPENVHIIGHSLGAHTAGEAGRRLE-----GRVGRVTGLDPAE 181 (452)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTT-----TCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcc-----cceeeEEeccccc
Confidence 43458999999999999999999987 7899999998764
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=2.4e-13 Score=143.29 Aligned_cols=112 Identities=11% Similarity=0.126 Sum_probs=86.4
Q ss_pred CCCCcEEEecCCCCCc-ceeecCCCCCHHHHHHhC-CCcEEEecCCCCCCcccccccCccccccccccccCCCccccccc
Q 011833 92 QRNHPLLLLSGIGTNA-IGYDLSPEYSFARYMSGQ-GFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRES 169 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~-~~~~~~~~~~l~~~L~~~-Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 169 (476)
..+++|||+||++++. ..|. ..+++.|.++ ||+|+++|+||+|.|.....
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~----~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~~------------------------ 119 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKGEDGWL----LDMCKKMFQVEKVNCICVDWRRGSRTEYTQA------------------------ 119 (452)
T ss_dssp TTSEEEEEECCSCCTTCTTHH----HHHHHHHHTTCCEEEEEEECHHHHSSCHHHH------------------------
T ss_pred CCCCeEEEECCCCCCCCchHH----HHHHHHHHhhCCCEEEEEechhcccCchhHh------------------------
Confidence 3578999999999888 6673 1256777764 99999999999999852110
Q ss_pred chhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhC
Q 011833 170 QSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSK 249 (476)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~ 249 (476)
. +++.++ .+|+.++++++.+..+
T Consensus 120 ---------------------------------------~-----------------~~~~~~-~~dl~~li~~L~~~~g 142 (452)
T 1bu8_A 120 ---------------------------------------S-----------------YNTRVV-GAEIAFLVQVLSTEMG 142 (452)
T ss_dssp ---------------------------------------H-----------------HHHHHH-HHHHHHHHHHHHHHHC
T ss_pred ---------------------------------------H-----------------hhHHHH-HHHHHHHHHHHHHhcC
Confidence 0 111222 3789999999987666
Q ss_pred CCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 250 PKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 250 ~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
.+.+++++|||||||.+++.++.++| .+|+++++++|..
T Consensus 143 ~~~~~i~LvGhSlGg~vA~~~a~~~p-----~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 143 YSPENVHLIGHSLGAHVVGEAGRRLE-----GHVGRITGLDPAE 181 (452)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTT-----TCSSEEEEESCBC
T ss_pred CCccceEEEEEChhHHHHHHHHHhcc-----cccceEEEecCCc
Confidence 54458999999999999999999987 7899999998764
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.8e-12 Score=127.95 Aligned_cols=99 Identities=22% Similarity=0.257 Sum_probs=77.1
Q ss_pred CCCcEEEecCCCCCcc-----eeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCccccc
Q 011833 93 RNHPLLLLSGIGTNAI-----GYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSR 167 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~-----~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~ 167 (476)
.+++|||+||++++.. .| ..+.+.|.++||.|+++|+||+|.|...
T Consensus 6 ~~~~vvlvHG~~~~~~~~~~~~~-----~~~~~~L~~~G~~v~~~d~~g~g~s~~~------------------------ 56 (285)
T 1ex9_A 6 TKYPIVLAHGMLGFDNILGVDYW-----FGIPSALRRDGAQVYVTEVSQLDTSEVR------------------------ 56 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESS-----TTHHHHHHHTTCCEEEECCCSSSCHHHH------------------------
T ss_pred CCCeEEEeCCCCCCccccccccH-----HHHHHHHHhCCCEEEEEeCCCCCCchhh------------------------
Confidence 4789999999988754 66 6899999999999999999999976310
Q ss_pred ccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHH
Q 011833 168 ESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTL 247 (476)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~ 247 (476)
.+++.+.++.+.+.
T Consensus 57 ------------------------------------------------------------------~~~~~~~i~~~~~~ 70 (285)
T 1ex9_A 57 ------------------------------------------------------------------GEQLLQQVEEIVAL 70 (285)
T ss_dssp ------------------------------------------------------------------HHHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------------HHHHHHHHHHHHHH
Confidence 12333333333334
Q ss_pred hCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 248 SKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 248 ~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
.+. +++++|||||||.++..++..+| .+|+++|+++++.
T Consensus 71 ~~~--~~v~lvGhS~GG~~a~~~a~~~p-----~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 71 SGQ--PKVNLIGHSHGGPTIRYVAAVRP-----DLIASATSVGAPH 109 (285)
T ss_dssp HCC--SCEEEEEETTHHHHHHHHHHHCG-----GGEEEEEEESCCT
T ss_pred hCC--CCEEEEEECHhHHHHHHHHHhCh-----hheeEEEEECCCC
Confidence 343 48999999999999999999877 7899999999853
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=2.3e-11 Score=118.54 Aligned_cols=61 Identities=20% Similarity=0.254 Sum_probs=45.9
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
++++++.+|+..+|+ +..+.+.++++++||||||.+++.++.++| .++++++++++..+..
T Consensus 92 ~~~~~~~~~l~~~i~---~~~~~~~~~~~l~G~S~GG~~al~~a~~~p-----~~~~~~v~~sg~~~~~ 152 (280)
T 1dqz_A 92 KWETFLTREMPAWLQ---ANKGVSPTGNAAVGLSMSGGSALILAAYYP-----QQFPYAASLSGFLNPS 152 (280)
T ss_dssp BHHHHHHTHHHHHHH---HHHCCCSSSCEEEEETHHHHHHHHHHHHCT-----TTCSEEEEESCCCCTT
T ss_pred cHHHHHHHHHHHHHH---HHcCCCCCceEEEEECHHHHHHHHHHHhCC-----chheEEEEecCccccc
Confidence 444444456655554 334444358999999999999999999998 8899999999887543
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.26 E-value=2.3e-12 Score=135.67 Aligned_cols=112 Identities=9% Similarity=0.112 Sum_probs=83.2
Q ss_pred CCCCcEEEecCCCCCc-ceeecCCCCCHHHHH-HhCCCcEEEecCCCCCCcccccccCccccccccccccCCCccccccc
Q 011833 92 QRNHPLLLLSGIGTNA-IGYDLSPEYSFARYM-SGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRES 169 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~-~~~~~~~~~~l~~~L-~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 169 (476)
..+|+|||+|||+++. ..|. ..++..| +..+|+|+++|+||+|.|.....
T Consensus 67 ~~~p~vvliHG~~~s~~~~w~----~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~------------------------ 118 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGEESWL----STMCQNMFKVESVNCICVDWKSGSRTAYSQA------------------------ 118 (449)
T ss_dssp TTSEEEEEECCCCCTTCTTHH----HHHHHHHHHHCCEEEEEEECHHHHSSCHHHH------------------------
T ss_pred CCCCeEEEEecCCCCCCccHH----HHHHHHHHhcCCeEEEEEeCCcccCCccHHH------------------------
Confidence 3468899999999885 4672 1255665 45689999999999998742110
Q ss_pred chhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhC
Q 011833 170 QSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSK 249 (476)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~ 249 (476)
.++++.+ .+|+.++++++.+..+
T Consensus 119 --------------------------------------------------------~~~~~~v-~~~la~ll~~L~~~~g 141 (449)
T 1hpl_A 119 --------------------------------------------------------SQNVRIV-GAEVAYLVGVLQSSFD 141 (449)
T ss_dssp --------------------------------------------------------HHHHHHH-HHHHHHHHHHHHHHHC
T ss_pred --------------------------------------------------------HHHHHHH-HHHHHHHHHHHHHhcC
Confidence 0111222 3688889999876655
Q ss_pred CCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 250 PKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 250 ~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
.+.+++++|||||||.++..++.++| .+|+++++++|..
T Consensus 142 ~~~~~v~LIGhSlGg~vA~~~a~~~p-----~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 142 YSPSNVHIIGHSLGSHAAGEAGRRTN-----GAVGRITGLDPAE 180 (449)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTT-----TCSSEEEEESCBC
T ss_pred CCcccEEEEEECHhHHHHHHHHHhcc-----hhcceeeccCccc
Confidence 44458999999999999999999987 7899999998754
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.26 E-value=2.2e-12 Score=135.85 Aligned_cols=110 Identities=9% Similarity=0.118 Sum_probs=81.6
Q ss_pred CCCcEEEecCCCCCcc-eeecCCCCCHHHHHHh-CCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccc
Q 011833 93 RNHPLLLLSGIGTNAI-GYDLSPEYSFARYMSG-QGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQ 170 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~-~~~~~~~~~l~~~L~~-~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 170 (476)
.+|+|||+|||+++.. .|. ..++..|.+ .+|+|+++|+||+|.|.....
T Consensus 69 ~~p~vvliHG~~~s~~~~w~----~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~------------------------- 119 (450)
T 1rp1_A 69 DKKTRFIIHGFIDKGEENWL----LDMCKNMFKVEEVNCICVDWKKGSQTSYTQA------------------------- 119 (450)
T ss_dssp TSEEEEEECCCCCTTCTTHH----HHHHHHHTTTCCEEEEEEECHHHHSSCHHHH-------------------------
T ss_pred CCCeEEEEccCCCCCCcchH----HHHHHHHHhcCCeEEEEEeCccccCCcchHH-------------------------
Confidence 4688999999998864 562 224555654 489999999999987642110
Q ss_pred hhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCC
Q 011833 171 SKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKP 250 (476)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~ 250 (476)
.++++.+ .+|+.++++++.+..+.
T Consensus 120 -------------------------------------------------------~~~~~~~-a~~l~~ll~~L~~~~g~ 143 (450)
T 1rp1_A 120 -------------------------------------------------------ANNVRVV-GAQVAQMLSMLSANYSY 143 (450)
T ss_dssp -------------------------------------------------------HHHHHHH-HHHHHHHHHHHHHHHCC
T ss_pred -------------------------------------------------------HHHHHHH-HHHHHHHHHHHHHhcCC
Confidence 0112222 37888999998766554
Q ss_pred CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 251 KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 251 ~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
+.+++++|||||||.++..++.++| . |.++++++|..
T Consensus 144 ~~~~v~LVGhSlGg~vA~~~a~~~p-----~-v~~iv~Ldpa~ 180 (450)
T 1rp1_A 144 SPSQVQLIGHSLGAHVAGEAGSRTP-----G-LGRITGLDPVE 180 (450)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHTST-----T-CCEEEEESCCC
T ss_pred ChhhEEEEEECHhHHHHHHHHHhcC-----C-cccccccCccc
Confidence 4458999999999999999999987 5 99999998754
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.21 E-value=2.7e-11 Score=104.68 Aligned_cols=50 Identities=20% Similarity=0.361 Sum_probs=37.5
Q ss_pred CCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccc
Q 011833 74 NSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~ 142 (476)
.+|.++.+.... ++++||++| .+...|. .+ |++ +|+|+++|+||+|.|..
T Consensus 9 ~~g~~~~~~~~g-------~~~~vv~~H---~~~~~~~-----~~---l~~-~~~v~~~d~~G~G~s~~ 58 (131)
T 2dst_A 9 LYGLNLVFDRVG-------KGPPVLLVA---EEASRWP-----EA---LPE-GYAFYLLDLPGYGRTEG 58 (131)
T ss_dssp ETTEEEEEEEEC-------CSSEEEEES---SSGGGCC-----SC---CCT-TSEEEEECCTTSTTCCC
T ss_pred ECCEEEEEEEcC-------CCCeEEEEc---CCHHHHH-----HH---HhC-CcEEEEECCCCCCCCCC
Confidence 388888777652 257899999 5566673 33 544 59999999999999865
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=7.3e-10 Score=109.68 Aligned_cols=37 Identities=19% Similarity=0.194 Sum_probs=33.1
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
.++.++||||||.+++.++.++| .++++++++++...
T Consensus 158 ~~~~i~G~S~GG~~al~~a~~~p-----~~f~~~v~~sg~~~ 194 (297)
T 1gkl_A 158 MHRGFGGFAMGGLTTWYVMVNCL-----DYVAYFMPLSGDYW 194 (297)
T ss_dssp GGEEEEEETHHHHHHHHHHHHHT-----TTCCEEEEESCCCC
T ss_pred cceEEEEECHHHHHHHHHHHhCc-----hhhheeeEeccccc
Confidence 47999999999999999999988 78999999998754
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.18 E-value=7e-12 Score=131.21 Aligned_cols=50 Identities=10% Similarity=0.253 Sum_probs=37.8
Q ss_pred CCCCcEEEecCCCCCc--------ceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccc
Q 011833 92 QRNHPLLLLSGIGTNA--------IGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~--------~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~ 142 (476)
+.+++|||+||++++. ..|. .-...+++.|.++||+|+++|+||+|.|..
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~-~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~ 107 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWG-GTKANLRNHLRKAGYETYEASVSALASNHE 107 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTT-TTTCCHHHHHHHTTCCEEEECCCSSSCHHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhh-ccHHHHHHHHHhCCCEEEEEcCCCCCCCcc
Confidence 3578999999997752 3341 000158999999999999999999998853
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.16 E-value=5.2e-11 Score=125.14 Aligned_cols=63 Identities=13% Similarity=0.181 Sum_probs=51.7
Q ss_pred CCchhhhhccHHHHHHHHHHHh-CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLS-KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~-~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
+++++++ +|+..++++++... +.+..+++++||||||.+++.++.++| +.|.++|+.++++..
T Consensus 100 lt~~q~~-~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP-----~~v~g~i~ssapv~~ 163 (446)
T 3n2z_B 100 LTSEQAL-ADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYP-----HMVVGALAASAPIWQ 163 (446)
T ss_dssp CSHHHHH-HHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCT-----TTCSEEEEETCCTTC
T ss_pred CCHHHHH-HHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhh-----ccccEEEEeccchhc
Confidence 4566666 89999999998763 333458999999999999999999998 889999998876543
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.3e-10 Score=113.45 Aligned_cols=49 Identities=20% Similarity=0.281 Sum_probs=39.4
Q ss_pred HHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 240 VMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 240 ~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
++.++.+....+.+++.++||||||.+++.++.++| ..+++++++++..
T Consensus 139 l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p-----~~f~~~~~~s~~~ 187 (275)
T 2qm0_A 139 LKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNL-----NAFQNYFISSPSI 187 (275)
T ss_dssp HHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCG-----GGCSEEEEESCCT
T ss_pred HHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCc-----hhhceeEEeCcee
Confidence 455666665544458999999999999999999987 7899999988764
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.11 E-value=2.1e-10 Score=118.49 Aligned_cols=47 Identities=17% Similarity=0.318 Sum_probs=36.7
Q ss_pred CCCcEEEecCCCCCcc-------eeecCCCC-CHHHHHHhCCCcEEEecCCCCCCcc
Q 011833 93 RNHPLLLLSGIGTNAI-------GYDLSPEY-SFARYMSGQGFDTWILEVRGAGLSA 141 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~-------~~~~~~~~-~l~~~L~~~Gy~V~~~D~rG~G~S~ 141 (476)
.++||||+||++++.. .|. ... .+++.|+++||+|+++|+||+|.|.
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~--~~~~~la~~L~~~G~~Via~Dl~g~G~s~ 59 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWG--GVRGDIEQWLNDNGYRTYTLAVGPLSSNW 59 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTT--TTTCCHHHHHHHTTCCEEEECCCSSBCHH
T ss_pred CCCcEEEECCCCCCCcccccccchhh--hhhHHHHHHHHHCCCEEEEecCCCCCCcc
Confidence 4688999999987642 351 112 5669999999999999999999874
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=5.7e-10 Score=115.58 Aligned_cols=130 Identities=12% Similarity=0.149 Sum_probs=82.1
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCc----EEEecCCCCC-CcccccccC
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFD----TWILEVRGAG-LSAHRVEFG 147 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~----V~~~D~rG~G-~S~~~~~~~ 147 (476)
...|....++.|.|......+.|+|+++||.+... ......++..|+++|+. |+++|.+|++ ++....
T Consensus 176 ~~~g~~~~~~vy~P~~~~~~~~PvlvllHG~~~~~----~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~~--- 248 (403)
T 3c8d_A 176 ERLKNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQ----SMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELP--- 248 (403)
T ss_dssp TTTTEEEEEEEEEC-----CCCCEEEESSHHHHHH----TSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSS---
T ss_pred cccCCcEEEEEEeCCCCCCCCCCEEEEeCCHHHhh----cCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccCC---
Confidence 34677888888887653234568899999943110 01112467888888886 9999998732 110000
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
...
T Consensus 249 ---------------------------------------------------------------~~~-------------- 251 (403)
T 3c8d_A 249 ---------------------------------------------------------------CNA-------------- 251 (403)
T ss_dssp ---------------------------------------------------------------SCH--------------
T ss_pred ---------------------------------------------------------------ChH--------------
Confidence 000
Q ss_pred CchhhhhccHHHHHHHHHHHhC--CCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSK--PKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~--~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
.+.+++.+ +++.++.+... .+.++++++||||||.+++.++.++| ..+++++++++...
T Consensus 252 ~~~~~l~~---el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p-----~~f~~~~~~sg~~~ 312 (403)
T 3c8d_A 252 DFWLAVQQ---ELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWP-----ERFGCVLSQSGSYW 312 (403)
T ss_dssp HHHHHHHH---THHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCT-----TTCCEEEEESCCTT
T ss_pred HHHHHHHH---HHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCc-----hhhcEEEEeccccc
Confidence 01222223 34566666543 23358999999999999999999987 78999999988764
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.74 E-value=1.7e-07 Score=92.94 Aligned_cols=35 Identities=26% Similarity=0.373 Sum_probs=30.0
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCC
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVR 135 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~r 135 (476)
.+++++++||++++...| ..++..|. +.|+++|++
T Consensus 45 ~~~~l~~~hg~~g~~~~~-----~~~~~~l~---~~v~~~~~~ 79 (316)
T 2px6_A 45 SERPLFLVHPIEGSTTVF-----HSLASRLS---IPTYGLQCT 79 (316)
T ss_dssp SSCCEEEECCTTCCSGGG-----HHHHHHCS---SCEEEECCC
T ss_pred CCCeEEEECCCCCCHHHH-----HHHHHhcC---CCEEEEECC
Confidence 468899999999999888 46777763 999999998
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=6.8e-08 Score=94.55 Aligned_cols=47 Identities=21% Similarity=0.181 Sum_probs=36.7
Q ss_pred HHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 241 MEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 241 i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
+.++.+....+.+++.++||||||.+++.++.+ | ..+++++++++..
T Consensus 129 ~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p-----~~f~~~~~~s~~~ 175 (278)
T 2gzs_A 129 APKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-S-----SYFRSYYSASPSL 175 (278)
T ss_dssp HHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-C-----SSCSEEEEESGGG
T ss_pred HHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-c-----cccCeEEEeCcch
Confidence 344444444443479999999999999999998 8 7899999988764
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.65 E-value=3.3e-07 Score=97.29 Aligned_cols=57 Identities=18% Similarity=0.229 Sum_probs=43.5
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
..|..++++|+++.. +.+.++|.++|||+||.++..++.... ....++++|++++..
T Consensus 159 l~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~---~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 159 LLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPA---AKGLFQKAIMESGAS 218 (489)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGG---GTTSCSEEEEESCCC
T ss_pred hHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCcc---ccchHHHHHHhCCCC
Confidence 368888999998864 334468999999999999887776531 125689999998865
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=5.3e-07 Score=89.74 Aligned_cols=66 Identities=14% Similarity=0.197 Sum_probs=45.0
Q ss_pred CCCchhhhhccHHHHHHHHHHHh----CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLS----KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~----~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
.+.+++|+.++++..|+.--... ..+.++..+.||||||.-|+.++.++| ...+..++...++...
T Consensus 122 ~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~---~~~~~~~~~s~s~~~~ 191 (299)
T 4fol_A 122 HYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGY---SGKRYKSCSAFAPIVN 191 (299)
T ss_dssp TCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTG---GGTCCSEEEEESCCCC
T ss_pred CccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCC---CCCceEEEEecccccC
Confidence 36678888888887776432211 111246899999999999999998864 1245677777776554
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=8.4e-07 Score=91.55 Aligned_cols=53 Identities=15% Similarity=0.028 Sum_probs=46.3
Q ss_pred ccHHHHHHHHHH----HhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 235 EDVPAVMEYIRT----LSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 235 ~Dl~a~i~~l~~----~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
-|+..+|++|++ +...+.++|.++|||+||..++.+++. +++|+.+|..++..
T Consensus 197 Wg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~------D~Ri~~vi~~~sg~ 253 (433)
T 4g4g_A 197 WGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGAL------VDRIALTIPQESGA 253 (433)
T ss_dssp HHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHH------CTTCSEEEEESCCT
T ss_pred HhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhc------CCceEEEEEecCCC
Confidence 478889999999 778877899999999999999999998 47899999987643
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.52 E-value=2.6e-07 Score=93.23 Aligned_cols=50 Identities=24% Similarity=0.298 Sum_probs=38.8
Q ss_pred HHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 239 AVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 239 a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
+++.++.++...+. ...++||||||..++.++.++| ..+++++.++|...
T Consensus 124 el~p~i~~~~~~~~-~r~i~G~S~GG~~al~~~~~~p-----~~F~~~~~~S~~~w 173 (331)
T 3gff_A 124 ELAPSIESQLRTNG-INVLVGHSFGGLVAMEALRTDR-----PLFSAYLALDTSLW 173 (331)
T ss_dssp THHHHHHHHSCEEE-EEEEEEETHHHHHHHHHHHTTC-----SSCSEEEEESCCTT
T ss_pred HHHHHHHHHCCCCC-CeEEEEECHHHHHHHHHHHhCc-----hhhheeeEeCchhc
Confidence 34555656654432 3479999999999999999988 88999999998764
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.48 E-value=6.8e-07 Score=95.08 Aligned_cols=58 Identities=16% Similarity=0.105 Sum_probs=44.8
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
..|..++++|+++.. +.+.++|.++|+|.||.++..++.... ....++++|+++++..
T Consensus 164 l~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~---~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 164 ILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPE---ASGLFRRAMLQSGSGS 224 (498)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGG---GTTSCSEEEEESCCTT
T ss_pred cHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhccc---ccchhheeeeccCCcc
Confidence 478999999998874 334468999999999999887776532 1246999999998664
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=6.9e-07 Score=89.72 Aligned_cols=43 Identities=9% Similarity=0.059 Sum_probs=36.3
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcCCC----ceeEEEecCCCCCCCccc
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIPEH----LVSFKVFGEPRGPHYAHY 450 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~~~----~~~~~v~~~~~~~~~gH~ 450 (476)
..|+|++||++|.+||++.++++++.+... .++++++ ++.||.
T Consensus 90 ~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~-----~g~gH~ 136 (318)
T 2d81_A 90 QRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTT-----TGAVHT 136 (318)
T ss_dssp GCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEE-----TTCCSS
T ss_pred CCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEe-----CCCCCC
Confidence 369999999999999999999999988643 3677776 889994
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.46 E-value=4e-06 Score=85.43 Aligned_cols=52 Identities=13% Similarity=0.081 Sum_probs=45.6
Q ss_pred ccHHHHHHHHHHHh--CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 235 EDVPAVMEYIRTLS--KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~--~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
-|+..+|+||+++. ..+.+||.++|||+||..++.+++. +++|+.+|..++.
T Consensus 165 Wg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~------D~Ri~~~v~~~~g 218 (375)
T 3pic_A 165 WGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAF------EKRIVLTLPQESG 218 (375)
T ss_dssp HHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHH------CTTEEEEEEESCC
T ss_pred HHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhc------CCceEEEEeccCC
Confidence 48888999999887 7777899999999999999999988 4789999988764
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.05 E-value=6.5e-06 Score=88.60 Aligned_cols=56 Identities=11% Similarity=0.196 Sum_probs=43.1
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
..|..++++|+++.. +.+.++|.++|+|.||.++..++.... ....++++|++++.
T Consensus 174 l~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~---~~~lf~~~i~~sg~ 232 (551)
T 2fj0_A 174 LRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKA---ADGLFRRAILMSGT 232 (551)
T ss_dssp HHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGG---GTTSCSEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCch---hhhhhhheeeecCC
Confidence 378899999998873 334468999999999999987776521 12568999999875
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.04 E-value=6.3e-06 Score=88.53 Aligned_cols=57 Identities=11% Similarity=0.028 Sum_probs=42.8
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
..|..++++|+++.. +.+.++|.++|+|.||.++..++.... ....++++|+.++..
T Consensus 173 l~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~---~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 173 LLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLP---SRSLFHRAVLQSGTP 232 (543)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHH---HHTTCSEEEEESCCS
T ss_pred HHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcc---cHHhHhhheeccCCc
Confidence 378999999998874 344568999999999998877765421 014688999998743
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=1.2e-05 Score=86.23 Aligned_cols=58 Identities=14% Similarity=0.119 Sum_probs=44.0
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
..|..++++|+++.. +.+.++|.++|||.||.++..++.... ....++++|++++...
T Consensus 173 l~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~---~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 173 HLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPL---AKNLFHRAISESGVAL 233 (542)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGG---GTTSCSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhh---hhHHHHHHhhhcCCcc
Confidence 368889999998864 344468999999999999988776521 1257899999987543
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=97.98 E-value=1.1e-05 Score=86.22 Aligned_cols=57 Identities=16% Similarity=0.135 Sum_probs=44.1
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
..|..++++|+++.. +.+.++|.++|+|.||.++..++.... ....++++|++++..
T Consensus 168 l~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~---~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 168 LFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPG---SHSLFTRAILQSGSF 227 (529)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGG---GGGGCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCcc---chHHHHHHHHhcCcc
Confidence 368899999998864 444468999999999999887776521 125789999999864
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=97.92 E-value=1.6e-05 Score=85.16 Aligned_cols=58 Identities=14% Similarity=0.119 Sum_probs=43.9
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
..|..++++|+++.. +.+.++|.++|+|.||.++..++.... ....++++|++++...
T Consensus 170 l~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~---~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 170 LLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPG---SRDLFRRAILQSGSPN 230 (537)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHH---HHTTCSEEEEESCCTT
T ss_pred cHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCcc---chhhhhhheeccCCcc
Confidence 378999999998874 344568999999999998877765421 0246899999987643
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.87 E-value=2.8e-05 Score=83.01 Aligned_cols=60 Identities=15% Similarity=0.108 Sum_probs=43.1
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
..|..++++|+++.. +.+.++|.++|+|.||..+...+...... ....++++|+.++...
T Consensus 164 l~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~-~~~lf~~~i~~sg~~~ 226 (522)
T 1ukc_A 164 LLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGK-DEGLFIGAIVESSFWP 226 (522)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTC-CCSSCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCcc-ccccchhhhhcCCCcC
Confidence 479999999998874 33446899999999998776655442110 1256889999887643
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00016 Score=75.82 Aligned_cols=63 Identities=14% Similarity=0.211 Sum_probs=48.9
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcCCCc---------------------------eeEEEecCCCCCCCcccccccc
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIPEHL---------------------------VSFKVFGEPRGPHYAHYDLVGS 455 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~---------------------------~~~~v~~~~~~~~~gH~~~~~~ 455 (476)
.++|||.+|+.|.+||.-..+...+.+.-.. .++.. +.++|| ++.
T Consensus 361 girVlIYsGD~D~icn~~Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~t-----V~gAGH---mVP 432 (452)
T 1ivy_A 361 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLT-----IKGAGH---MVP 432 (452)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEE-----ETTCCS---SHH
T ss_pred CceEEEEeCCCCccCCcHHHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEE-----ECCCcc---cCc
Confidence 6899999999999999999999988875211 11222 368999 556
Q ss_pred cCCccchhHHHHHHHHhh
Q 011833 456 RLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 456 ~~~~~~v~~~i~~fL~~~ 473 (476)
.+.|+..+..+..||...
T Consensus 433 ~dqP~~al~m~~~fl~g~ 450 (452)
T 1ivy_A 433 TDKPLAAFTMFSRFLNKQ 450 (452)
T ss_dssp HHCHHHHHHHHHHHHTTC
T ss_pred ccChHHHHHHHHHHhcCC
Confidence 788999999999998753
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.65 E-value=7.3e-05 Score=80.25 Aligned_cols=59 Identities=17% Similarity=0.167 Sum_probs=43.1
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcC-CCC--CCcccccEEEEeccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHC-GFE--GKDSGFASVTTLASS 292 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~-p~~--~~~~~v~~lvlla~~ 292 (476)
..|..++++|+++.. +.+.++|.++|+|.||.++..++... +.. .....++++|++++.
T Consensus 187 l~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~ 251 (544)
T 1thg_A 187 LHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEeccc
Confidence 479999999998874 44456899999999999887666542 100 012578999999874
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00011 Score=78.84 Aligned_cols=59 Identities=15% Similarity=0.128 Sum_probs=42.2
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcC-CCC--CCcccccEEEEeccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHC-GFE--GKDSGFASVTTLASS 292 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~-p~~--~~~~~v~~lvlla~~ 292 (476)
.+|..++++|+++.. +.+.++|.++|+|.||..+...+... +.. .....++++|++++.
T Consensus 179 l~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 179 LKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 479999999998864 34446899999999998776655442 000 013678999999874
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00012 Score=79.36 Aligned_cols=57 Identities=11% Similarity=0.052 Sum_probs=42.6
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
..|..++++|+++.. +.+.++|.++|+|.||.++..++.. |.. ...++++|+.++..
T Consensus 208 l~D~~~al~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~-~~~--~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 208 LWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMS-PVT--RGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHC-TTT--TTSCCEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhC-Ccc--cchhHhhhhhcccc
Confidence 468999999998864 3344689999999999988776654 211 25688999988653
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00023 Score=76.84 Aligned_cols=56 Identities=11% Similarity=0.061 Sum_probs=41.7
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLAS 291 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~ 291 (476)
..|..++++|+++.. +.+.++|.++|+|.||.++..++...... ...+.++|+.++
T Consensus 189 l~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~--~glf~~aI~~Sg 247 (574)
T 3bix_A 189 LLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSE--KGLFQRAIAQSG 247 (574)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSC--TTSCCEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcc--hhHHHHHHHhcC
Confidence 478999999998863 34456899999999999998777653211 135788888875
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0016 Score=63.09 Aligned_cols=61 Identities=11% Similarity=-0.015 Sum_probs=39.3
Q ss_pred ccHHHHHHHHHHHh-CCCCCcEeEEEEchHHHHHHHHHhcCC-CCCCcccccEEEEecccccc
Q 011833 235 EDVPAVMEYIRTLS-KPKDGKLLAVGHSMGGILLYAMLSHCG-FEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~-~~~~~ki~lvGhS~GG~ia~~~a~~~p-~~~~~~~v~~lvlla~~~~~ 295 (476)
+|+..+++.+.++. .....++++.|+|+||..+-.+|...- -+...-.++++++.++.++.
T Consensus 126 ~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~d~ 188 (255)
T 1whs_A 126 HDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLIDD 188 (255)
T ss_dssp HHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECCBH
T ss_pred HHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCccCH
Confidence 67777776555533 222348999999999987766664311 00112568899999887764
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00052 Score=74.20 Aligned_cols=56 Identities=9% Similarity=0.092 Sum_probs=41.6
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
..|..++++|+++.. +.+.++|.++|+|.||.++..++.. |.. ...+++.|+.++.
T Consensus 164 l~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~-~~~--~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 164 LWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLS-PYN--KGLIKRAISQSGV 222 (579)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHC-GGG--TTTCSEEEEESCC
T ss_pred hHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccC-cch--hhHHHHHHHhcCC
Confidence 368999999998864 3344689999999999988777654 211 2568888888753
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00096 Score=64.98 Aligned_cols=55 Identities=16% Similarity=0.126 Sum_probs=37.7
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
+|+...++.+++... +.++.++||||||.+|..++...... ...+..+++-+|..
T Consensus 122 ~~~~~~~~~~~~~~~--~~~i~l~GHSLGGalA~l~a~~l~~~--~~~~~~~tfg~P~v 176 (269)
T 1tib_A 122 DTLRQKVEDAVREHP--DYRVVFTGHSLGGALATVAGADLRGN--GYDIDVFSYGAPRV 176 (269)
T ss_dssp HHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHHHHTTS--SSCEEEEEESCCCC
T ss_pred HHHHHHHHHHHHHCC--CceEEEecCChHHHHHHHHHHHHHhc--CCCeEEEEeCCCCC
Confidence 677778887776643 24899999999999999998875411 12355444444433
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00035 Score=82.31 Aligned_cols=39 Identities=18% Similarity=0.157 Sum_probs=30.3
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
+++.++||||||.+++.++.+.. .....+..++++++..
T Consensus 1112 gp~~l~G~S~Gg~lA~e~A~~L~--~~g~~v~~l~lld~~~ 1150 (1304)
T 2vsq_A 1112 GPLTLFGYSAGCSLAFEAAKKLE--EQGRIVQRIIMVDSYK 1150 (1304)
T ss_dssp SCEEEEEETTHHHHHHHHHHHHH--HSSCCEEEEEEESCCE
T ss_pred CCeEEEEecCCchHHHHHHHHHH--hCCCceeEEEEecCcc
Confidence 48999999999999999987633 1235688888888643
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=96.85 E-value=0.016 Score=60.07 Aligned_cols=62 Identities=16% Similarity=0.257 Sum_probs=47.8
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcCCC---------c--------------------eeEEEecCCCCCCCcccccc
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIPEH---------L--------------------VSFKVFGEPRGPHYAHYDLV 453 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~~~---------~--------------------~~~~v~~~~~~~~~gH~~~~ 453 (476)
.++|||.+|+.|.+||.-..+...+.+.-. . .++..+ .++|| +
T Consensus 327 girVlIysGd~D~i~~~~Gt~~wi~~L~w~~~~~F~~a~~~~w~~~~~~~vaG~~~~~~~Ltf~~V-----~~AGH---m 398 (421)
T 1cpy_A 327 DLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRV-----FNGGH---M 398 (421)
T ss_dssp TCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEECEETTEEEEEE-----TTCCS---S
T ss_pred CCeEEEEECCcccccChHHHHHHHHhccCccchhhhhccccceEEcCCCceeeEEEEeccEEEEEE-----CCCcc---c
Confidence 589999999999999999988888776311 0 122222 68999 5
Q ss_pred cccCCccchhHHHHHHHHh
Q 011833 454 GSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 454 ~~~~~~~~v~~~i~~fL~~ 472 (476)
+..+.|+..+..+..||..
T Consensus 399 VP~dqP~~al~m~~~fl~g 417 (421)
T 1cpy_A 399 VPFDVPENALSMVNEWIHG 417 (421)
T ss_dssp HHHHCHHHHHHHHHHHHTT
T ss_pred CcccCHHHHHHHHHHHhcC
Confidence 5678899999999999974
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0052 Score=64.62 Aligned_cols=61 Identities=18% Similarity=0.235 Sum_probs=50.7
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
.|.++.+ .|++.+++++++..+..+.+++++|-|+||+++.-+-.+|| +.|.+.+.-++++
T Consensus 103 Lt~eQAL-aD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP-----~lv~ga~ASSApv 163 (472)
T 4ebb_A 103 LTVEQAL-ADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYP-----HLVAGALAASAPV 163 (472)
T ss_dssp CSHHHHH-HHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCT-----TTCSEEEEETCCT
T ss_pred CCHHHHH-HHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCC-----CeEEEEEecccce
Confidence 3445555 89999999999988777789999999999999999999999 6777777766554
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.037 Score=54.71 Aligned_cols=60 Identities=15% Similarity=0.238 Sum_probs=36.9
Q ss_pred ccHHHHHHH-HHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 235 EDVPAVMEY-IRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 235 ~Dl~a~i~~-l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
.|+..++.. +.........++++.|-|+||.-+-.+|... .....-.++++++..+..+.
T Consensus 125 ~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i-~~~~~inLkG~~iGNg~~d~ 185 (300)
T 4az3_A 125 QSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLV-MQDPSMNLQGLAVGNGLSSY 185 (300)
T ss_dssp HHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHH-TTCTTSCEEEEEEESCCSBH
T ss_pred HHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHH-HhCCCcccccceecCCccCH
Confidence 455555543 3333233345899999999998776665432 12223567888887776653
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0041 Score=60.81 Aligned_cols=39 Identities=18% Similarity=0.300 Sum_probs=29.1
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCC
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCG 275 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p 275 (476)
+++...++.+++... +.++.++||||||.+|..++....
T Consensus 121 ~~~~~~l~~~~~~~p--~~~i~vtGHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 121 DDIIKELKEVVAQNP--NYELVVVGHSLGAAVATLAATDLR 159 (279)
T ss_pred HHHHHHHHHHHHHCC--CCeEEEEecCHHHHHHHHHHHHHH
Confidence 566666666655542 348999999999999998887643
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.033 Score=58.74 Aligned_cols=63 Identities=14% Similarity=0.238 Sum_probs=48.7
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcC---------CC--------------------------ceeEEEecCCCCCCC
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIP---------EH--------------------------LVSFKVFGEPRGPHY 447 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~---------~~--------------------------~~~~~v~~~~~~~~~ 447 (476)
.++|||.+|+.|.+|+.-..+...+.+. .. ..++..+ .++
T Consensus 372 girVLIYsGD~D~icn~~Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV-----~gA 446 (483)
T 1ac5_A 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSV-----YNA 446 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEE-----TTC
T ss_pred CceEEEEECCcCcccCcHHHHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEEEE-----CCc
Confidence 5899999999999999999988887764 00 0122222 689
Q ss_pred cccccccccCCccchhHHHHHHHHhh
Q 011833 448 AHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 448 gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
|| ++..+.|+..+..+-.||.+.
T Consensus 447 GH---mVP~dqP~~al~m~~~fl~~~ 469 (483)
T 1ac5_A 447 SH---MVPFDKSLVSRGIVDIYSNDV 469 (483)
T ss_dssp CS---SHHHHCHHHHHHHHHHHTTCC
T ss_pred cc---cCcchhHHHHHHHHHHHHCCc
Confidence 99 566788999999999999764
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.81 E-value=0.066 Score=52.12 Aligned_cols=75 Identities=20% Similarity=0.197 Sum_probs=43.2
Q ss_pred eeEeeC-CCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCccee-e----cCCCCCHH--HHHH------hCCCcEEEec
Q 011833 68 HYVAVP-NSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGY-D----LSPEYSFA--RYMS------GQGFDTWILE 133 (476)
Q Consensus 68 ~~v~~~-~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~-~----~~~~~~l~--~~L~------~~Gy~V~~~D 133 (476)
-++.+. ..|..|.+|.+......+..+|.||+++|.++.+..+ . ++|..--. ..|. .+-.+|+-+|
T Consensus 27 Gyv~v~~~~~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~anllfiD 106 (270)
T 1gxs_A 27 GYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANILFAE 106 (270)
T ss_dssp EEEEEETTTTEEEEEEEECCCSSCGGGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGGTSEEEEEC
T ss_pred EEEEcCCCCCcEEEEEEEEecCCCCCCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchhccccEEEEe
Confidence 355543 3578899998855233456789999999996666443 1 11110000 0000 1125788889
Q ss_pred C-CCCCCccc
Q 011833 134 V-RGAGLSAH 142 (476)
Q Consensus 134 ~-rG~G~S~~ 142 (476)
. .|.|.|..
T Consensus 107 qPvGtGfSy~ 116 (270)
T 1gxs_A 107 SPAGVGFSYS 116 (270)
T ss_dssp CSTTSTTCEE
T ss_pred ccccccccCC
Confidence 5 58998843
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=95.63 E-value=0.002 Score=80.47 Aligned_cols=36 Identities=25% Similarity=0.384 Sum_probs=0.0
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCC
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRG 136 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG 136 (476)
.+++++++|+.++....| ..+++.|. ..|+.+..+|
T Consensus 2241 ~~~~Lfc~~~agG~~~~y-----~~l~~~l~---~~v~~lq~pg 2276 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSITVF-----HGLAAKLS---IPTYGLQCTG 2276 (2512)
T ss_dssp --------------------------------------------
T ss_pred CCCCeEEeCCccccHHHH-----HHHHHhhC---CcEEEEecCC
Confidence 357899999999888777 57777774 6788888776
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=95.57 E-value=0.019 Score=55.55 Aligned_cols=38 Identities=18% Similarity=0.127 Sum_probs=26.7
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC 274 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~ 274 (476)
+++...++.+.+.. ++.++.++||||||.+|..++...
T Consensus 120 ~~~~~~l~~~~~~~--p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 120 NELVATVLDQFKQY--PSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred HHHHHHHHHHHHHC--CCceEEEEeeCHHHHHHHHHHHHH
Confidence 45555555554432 234799999999999999888764
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=94.95 E-value=0.025 Score=54.65 Aligned_cols=53 Identities=15% Similarity=0.190 Sum_probs=35.3
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
+++...++.+++... +.++.+.|||+||.+|..++..... ...+|. ++..++|
T Consensus 109 ~~~~~~l~~~~~~~p--~~~i~vtGHSLGGalA~l~a~~l~~--~~~~v~-~~tFg~P 161 (261)
T 1uwc_A 109 DQVESLVKQQASQYP--DYALTVTGHSLGASMAALTAAQLSA--TYDNVR-LYTFGEP 161 (261)
T ss_dssp HHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHHHT--TCSSEE-EEEESCC
T ss_pred HHHHHHHHHHHHHCC--CceEEEEecCHHHHHHHHHHHHHhc--cCCCeE-EEEecCC
Confidence 456666666665543 3489999999999999888875321 124565 5555554
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=94.62 E-value=0.029 Score=54.38 Aligned_cols=38 Identities=24% Similarity=0.210 Sum_probs=29.3
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC 274 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~ 274 (476)
+++...++.+++... +.++.++||||||.+|..++...
T Consensus 121 ~~~~~~l~~~~~~~~--~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 121 NDYFPVVQEQLTAHP--TYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHCT--TCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCC--CCeEEEeccChHHHHHHHHHHHH
Confidence 566677777666543 34899999999999999888764
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=93.73 E-value=0.083 Score=46.83 Aligned_cols=63 Identities=13% Similarity=0.107 Sum_probs=51.7
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcCC----------------------CceeEEEecCCCCCCCcccccccccCCcc
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIPE----------------------HLVSFKVFGEPRGPHYAHYDLVGSRLAAY 460 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~~----------------------~~~~~~v~~~~~~~~~gH~~~~~~~~~~~ 460 (476)
.++|||.+|+.|.+||.-..+...+.+.- .+.++..+ .++|| ++..+.|+
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V-----~~AGH---mVP~dqP~ 135 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSV-----RGAGH---EVPLHRPR 135 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEE-----TTCCS---SHHHHSHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEE-----CCCcc---cCcccCHH
Confidence 68999999999999999999999998851 12455555 79999 55678899
Q ss_pred chhHHHHHHHHhh
Q 011833 461 QVYPCIIEFLTRH 473 (476)
Q Consensus 461 ~v~~~i~~fL~~~ 473 (476)
..+..+..||...
T Consensus 136 ~a~~m~~~fl~~~ 148 (153)
T 1whs_B 136 QALVLFQYFLQGK 148 (153)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCC
Confidence 9999999999764
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=93.12 E-value=0.082 Score=51.03 Aligned_cols=37 Identities=27% Similarity=0.293 Sum_probs=26.3
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~ 273 (476)
+++...++.+.+... +.++.+.|||+||.+|..++..
T Consensus 108 ~~~~~~l~~~~~~~p--~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 108 DTIITEVKALIAKYP--DYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHHHHHHHST--TCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC--CCeEEEeccCHHHHHHHHHHHH
Confidence 345555555555442 3489999999999999887764
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=92.84 E-value=0.079 Score=52.82 Aligned_cols=37 Identities=24% Similarity=0.328 Sum_probs=26.3
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~ 273 (476)
+++...++.+.+.. ++.++.+.|||+||.+|..++..
T Consensus 120 ~~l~~~l~~~~~~~--p~~~i~vtGHSLGGAlA~L~a~~ 156 (319)
T 3ngm_A 120 AAATAAVAKARKAN--PSFKVVSVGHSLGGAVATLAGAN 156 (319)
T ss_dssp HHHHHHHHHHHHSS--TTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhC--CCCceEEeecCHHHHHHHHHHHH
Confidence 44555555554443 23489999999999999888765
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=92.41 E-value=0.13 Score=50.28 Aligned_cols=37 Identities=14% Similarity=0.311 Sum_probs=26.8
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~ 273 (476)
+++...++.+.+... +.++.+.|||+||.+|..++..
T Consensus 122 ~~~~~~l~~~~~~~p--~~~l~vtGHSLGGalA~l~a~~ 158 (279)
T 3uue_A 122 DDIFTAVKKYKKEKN--EKRVTVIGHSLGAAMGLLCAMD 158 (279)
T ss_dssp HHHHHHHHHHHHHHT--CCCEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC--CceEEEcccCHHHHHHHHHHHH
Confidence 445555665555543 3489999999999999888764
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=90.70 E-value=0.23 Score=49.00 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=25.7
Q ss_pred cHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC
Q 011833 236 DVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC 274 (476)
Q Consensus 236 Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~ 274 (476)
++...++.+.+... +.++.+.|||+||.+|..++...
T Consensus 139 ~i~~~l~~~~~~~p--~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 139 QIGPKLDSVIEQYP--DYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHHHHH
Confidence 34444454444432 34899999999999998888653
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=89.58 E-value=0.48 Score=41.83 Aligned_cols=64 Identities=14% Similarity=0.208 Sum_probs=49.3
Q ss_pred CcccEEEEeeCCCCcCCHHHHHHHHHhcCCCc---------------------------eeEEEecCCCCCCCccccccc
Q 011833 402 TNVPVLALAADQDLICPTEAVYETVKLIPEHL---------------------------VSFKVFGEPRGPHYAHYDLVG 454 (476)
Q Consensus 402 i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~---------------------------~~~~v~~~~~~~~~gH~~~~~ 454 (476)
-.++|||.+|+.|.+|+....+...+.+.-.. .++.. +.++|| ++
T Consensus 62 ~girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~-----V~~AGH---mV 133 (155)
T 4az3_B 62 QKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLT-----IKGAGH---MV 133 (155)
T ss_dssp CCCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEE-----ETTCCS---CH
T ss_pred cCceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEE-----ECCCcC---cC
Confidence 46899999999999999999998888774210 11222 268999 66
Q ss_pred ccCCccchhHHHHHHHHhh
Q 011833 455 SRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 455 ~~~~~~~v~~~i~~fL~~~ 473 (476)
..+.|+..+..+..||...
T Consensus 134 P~dqP~~al~m~~~fl~g~ 152 (155)
T 4az3_B 134 PTDKPLAAFTMFSRFLNKQ 152 (155)
T ss_dssp HHHCHHHHHHHHHHHHTTC
T ss_pred hhhCHHHHHHHHHHHHcCC
Confidence 6788999999999999754
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=88.46 E-value=0.72 Score=42.62 Aligned_cols=56 Identities=16% Similarity=0.166 Sum_probs=40.3
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
.|+...|+...+.- ++.|++|+|+|+|+.++-.++...|-. ...+|+++++++-+.
T Consensus 81 ~~~~~~i~~~~~~C--P~tkiVL~GYSQGA~V~~~~~~~l~~~-~~~~V~avvlfGdP~ 136 (197)
T 3qpa_A 81 REMLGLFQQANTKC--PDATLIAGGYXQGAALAAASIEDLDSA-IRDKIAGTVLFGYTK 136 (197)
T ss_dssp HHHHHHHHHHHHHC--TTCEEEEEEETHHHHHHHHHHHHSCHH-HHTTEEEEEEESCTT
T ss_pred HHHHHHHHHHHHhC--CCCcEEEEecccccHHHHHHHhcCCHh-HHhheEEEEEeeCCc
Confidence 56777776665553 345999999999999998777654410 126799999998765
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=87.56 E-value=0.75 Score=42.72 Aligned_cols=58 Identities=16% Similarity=0.192 Sum_probs=38.4
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC------------CCCC-CcccccEEEEeccccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC------------GFEG-KDSGFASVTTLASSLD 294 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~------------p~~~-~~~~v~~lvlla~~~~ 294 (476)
.|+...|+...++- ++.|++|+|||+|+.++-.++..- |+.. ...+|+++++++.+..
T Consensus 66 ~~~~~~i~~~~~~C--P~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~~ 136 (207)
T 1qoz_A 66 NAAAAAINNFHNSC--PDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDPRN 136 (207)
T ss_dssp HHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTTC
T ss_pred HHHHHHHHHHHhhC--CCCcEEEEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhccEEEEEEEcCCcc
Confidence 56666666554443 456999999999999998777420 1110 0146889999887653
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=87.38 E-value=0.8 Score=42.54 Aligned_cols=58 Identities=14% Similarity=0.178 Sum_probs=38.6
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC------------CCCC-CcccccEEEEeccccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC------------GFEG-KDSGFASVTTLASSLD 294 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~------------p~~~-~~~~v~~lvlla~~~~ 294 (476)
.|+...|+...++- ++.|++|+|||+|+.++-.++... |+.. ...+|+++++++.+..
T Consensus 66 ~~~~~~i~~~~~~C--P~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~~ 136 (207)
T 1g66_A 66 AAVASAVNSFNSQC--PSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPMF 136 (207)
T ss_dssp HHHHHHHHHHHHHS--TTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTTC
T ss_pred HHHHHHHHHHHHhC--CCCcEEEEeeCchHHHHHHHHhcccccccccccCCCCCChhhhccEEEEEEEcCCCc
Confidence 56666666654443 446999999999999998777421 1110 0156889999887653
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=85.71 E-value=0.59 Score=43.37 Aligned_cols=56 Identities=11% Similarity=0.133 Sum_probs=39.8
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
.|+...|+...++- ++.|++|+|+|+|+.++-.++...|- ....+|+++++++-+.
T Consensus 89 ~~~~~~i~~~~~~C--P~tkiVL~GYSQGA~V~~~~~~~l~~-~~~~~V~avvlfGdP~ 144 (201)
T 3dcn_A 89 NEARRLFTLANTKC--PNAAIVSGGYSQGTAVMAGSISGLST-TIKNQIKGVVLFGYTK 144 (201)
T ss_dssp HHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHTTSCH-HHHHHEEEEEEETCTT
T ss_pred HHHHHHHHHHHHhC--CCCcEEEEeecchhHHHHHHHhcCCh-hhhhheEEEEEeeCcc
Confidence 56777776665553 44699999999999999877754330 0125799999988765
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=85.01 E-value=1.5 Score=38.84 Aligned_cols=63 Identities=13% Similarity=0.224 Sum_probs=48.7
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcCCCc-------------------------eeEEEecCCCCCCCcccccccccC
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIPEHL-------------------------VSFKVFGEPRGPHYAHYDLVGSRL 457 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~-------------------------~~~~v~~~~~~~~~gH~~~~~~~~ 457 (476)
.++|||.+|+.|.+||.-..+...+.+.-.. .++..+ .++|| ++..+
T Consensus 66 girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V-----~~AGH---mVP~d 137 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTV-----RGAGH---LVPVH 137 (158)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEE-----TTCCS---SHHHH
T ss_pred CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEE-----CCCcc---cCccc
Confidence 6899999999999999999999888774210 122222 68999 55577
Q ss_pred CccchhHHHHHHHHhh
Q 011833 458 AAYQVYPCIIEFLTRH 473 (476)
Q Consensus 458 ~~~~v~~~i~~fL~~~ 473 (476)
.|+..+..+..||...
T Consensus 138 qP~~al~m~~~fl~g~ 153 (158)
T 1gxs_B 138 RPAQAFLLFKQFLKGE 153 (158)
T ss_dssp CHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHHHcCC
Confidence 8899999999999764
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=84.16 E-value=0.79 Score=42.58 Aligned_cols=58 Identities=10% Similarity=0.016 Sum_probs=40.0
Q ss_pred hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC--CCCCCcccccEEEEeccccc
Q 011833 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC--GFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~--p~~~~~~~v~~lvlla~~~~ 294 (476)
..|+...|+...++- ++.|++|+|+|+|+.++-.++... | .....+|+++++++-+..
T Consensus 60 ~~~~~~~i~~~~~~C--P~tkivl~GYSQGA~V~~~~~~~lg~~-~~~~~~V~avvlfGdP~~ 119 (205)
T 2czq_A 60 TADIIRRINSGLAAN--PNVCYILQGYSQGAAATVVALQQLGTS-GAAFNAVKGVFLIGNPDH 119 (205)
T ss_dssp HHHHHHHHHHHHHHC--TTCEEEEEEETHHHHHHHHHHHHHCSS-SHHHHHEEEEEEESCTTC
T ss_pred HHHHHHHHHHHHhhC--CCCcEEEEeeCchhHHHHHHHHhccCC-hhhhhhEEEEEEEeCCCc
Confidence 356666776655543 446999999999999987776543 2 011257999999986543
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=83.95 E-value=1.5 Score=42.08 Aligned_cols=58 Identities=14% Similarity=0.131 Sum_probs=38.5
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcC------CCCCCcccccEEEEeccccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHC------GFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~------p~~~~~~~v~~lvlla~~~~ 294 (476)
.++...++...++- ++.|++++|+|+|+.++-.++... +......+|+++++++-+..
T Consensus 58 ~~~~~~i~~~~~~C--P~tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~r 121 (254)
T 3hc7_A 58 AELILQIELKLDAD--PYADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPMR 121 (254)
T ss_dssp HHHHHHHHHHHHHC--TTCCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTTC
T ss_pred HHHHHHHHHHHhhC--CCCeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCCC
Confidence 45555555444332 446999999999999997776542 11112368999999986654
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=83.79 E-value=0.91 Score=45.57 Aligned_cols=21 Identities=33% Similarity=0.480 Sum_probs=18.6
Q ss_pred CcEeEEEEchHHHHHHHHHhc
Q 011833 253 GKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~ 273 (476)
.++.+.|||+||.+|..++..
T Consensus 166 ~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 166 AKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp EEEEEEEETHHHHHHHHHHHH
T ss_pred ceEEEecCChHHHHHHHHHHH
Confidence 489999999999999888764
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=83.65 E-value=0.85 Score=41.78 Aligned_cols=56 Identities=13% Similarity=0.171 Sum_probs=37.9
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
.++..+++...++- ++.|++|+|+|+|+.++-.++...|- ....+|+++++++-+.
T Consensus 77 ~~~~~~i~~~~~~C--P~tkivl~GYSQGA~V~~~~~~~l~~-~~~~~V~avvlfGdP~ 132 (187)
T 3qpd_A 77 AEAQGLFEQAVSKC--PDTQIVAGGYSQGTAVMNGAIKRLSA-DVQDKIKGVVLFGYTR 132 (187)
T ss_dssp HHHHHHHHHHHHHC--TTCEEEEEEETHHHHHHHHHHTTSCH-HHHHHEEEEEEESCTT
T ss_pred HHHHHHHHHHHHhC--CCCcEEEEeeccccHHHHhhhhcCCH-hhhhhEEEEEEeeCCc
Confidence 44555555443433 44699999999999999877754330 0025799999988765
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 476 | ||||
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 6e-15 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 7e-05 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 1e-04 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 2e-04 |
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 74.0 bits (180), Expect = 6e-15
Identities = 45/263 (17%), Positives = 87/263 (33%), Gaps = 26/263 (9%)
Query: 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFAS 285
+ FD + D+PA +++I L K KL VGHS G + + S K
Sbjct: 120 AFSFDEMAKYDLPATIDFI--LKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFY 177
Query: 286 VTTLASSLDYRPSNSLLRLLLP----LSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLS 341
+++ Y + +L+P + P FLA + + S
Sbjct: 178 ALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCS 237
Query: 342 WLKFLISAPD--MMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKD-- 397
F+I D ++ + + N + + + + G ++
Sbjct: 238 NALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMM 297
Query: 398 ----------HIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHY 447
++ +VP+ DL+ V + +P +L+ + P Y
Sbjct: 298 HYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLP-NLIYHRKI-----PPY 351
Query: 448 AHYDLVGSRLAAYQVYPCIIEFL 470
H D + + A VY I+ +
Sbjct: 352 NHLDFIWAMDAPQAVYNEIVSMM 374
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 42.8 bits (99), Expect = 7e-05
Identities = 17/90 (18%), Positives = 34/90 (37%), Gaps = 5/90 (5%)
Query: 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNH---PLLLLSGIGTNAIGYDLS-PEYSFARY 121
E + V + + L + R + L G+ +A + + P S A
Sbjct: 28 EEYEVVTED-GYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFI 86
Query: 122 MSGQGFDTWILEVRGAGLSAHRVEFGEDSM 151
++ G+D W+ RG + + + DS+
Sbjct: 87 LADAGYDVWLGNSRGNTWARRNLYYSPDSV 116
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 41.4 bits (96), Expect = 1e-04
Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 7/89 (7%)
Query: 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGF 127
H + V N L +W P P +N+ +L+ SG + A Y+S GF
Sbjct: 7 HVLRVNNGQ-ELHVWETPPKENVPFKNNTILIASGFARRMDHFA-----GLAEYLSTNGF 60
Query: 128 DTWILEVRGAGLSAHRVEFGEDSMITSAN 156
+ + + E +M T N
Sbjct: 61 HVFRYDSLHHVGLSS-GSIDEFTMTTGKN 88
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 41.0 bits (94), Expect = 2e-04
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 10/86 (11%)
Query: 387 CDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPH 446
++ G F+ + I K VP L + D + P E Y+ + LI + + P H
Sbjct: 192 REQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDD--SWGYII--PHCGH 247
Query: 447 YAHYDLVGSRLAAYQVYPCIIEFLTR 472
+A + + FL+
Sbjct: 248 WAMIE------HPEDFANATLSFLSL 267
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 476 | |||
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 100.0 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.96 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.96 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.95 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.95 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.95 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.95 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 99.95 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.94 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.94 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.94 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.94 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.94 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.94 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.93 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.93 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.93 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.93 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.93 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.93 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.93 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.93 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.93 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.92 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.91 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.91 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.9 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.88 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.88 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.88 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.87 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.84 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.84 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.84 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.82 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.8 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.78 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.76 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.76 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.76 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.72 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.71 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.68 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.67 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.66 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.65 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.65 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.62 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.59 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.59 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.59 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.57 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.56 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.56 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.55 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.55 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.54 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.5 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.5 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.47 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.43 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.43 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.41 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.4 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.38 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.38 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.32 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.32 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.31 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.28 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.2 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.93 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 98.89 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 98.84 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.76 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.72 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 98.71 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.57 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.36 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.28 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.17 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.15 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.06 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.04 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 97.9 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 97.84 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 97.3 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 97.14 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 97.05 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 97.02 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 97.01 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 97.0 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 96.91 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 96.21 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 96.07 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 95.88 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 95.75 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 93.86 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 93.52 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 93.5 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 93.44 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 92.3 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 90.79 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 86.1 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 82.83 |
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=100.00 E-value=2.5e-35 Score=291.90 Aligned_cols=327 Identities=16% Similarity=0.178 Sum_probs=223.8
Q ss_pred CCCCCceeeEeeCCCceEEEEEEEcCCC---CCCCCCCcEEEecCCCCCcceeec-CCCCCHHHHHHhCCCcEEEecCCC
Q 011833 61 ICTADELHYVAVPNSDWRLALWRYLPSP---AAPQRNHPLLLLSGIGTNAIGYDL-SPEYSFARYMSGQGFDTWILEVRG 136 (476)
Q Consensus 61 ~~~~~e~~~v~~~~dG~~L~~~~~~p~~---~~~~~~~~VlllHG~~~~~~~~~~-~~~~~l~~~L~~~Gy~V~~~D~rG 136 (476)
...+.|.|+|+ |+||+.|.++++...+ .+.+.+|+|||+||+++++..|.. .+..+++..|+++||+||++|+||
T Consensus 23 ~~y~~e~h~v~-t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG 101 (377)
T d1k8qa_ 23 WGYPAEEYEVV-TEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRG 101 (377)
T ss_dssp TTCCCEEEEEE-CTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTT
T ss_pred cCCCceEEEEE-cCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCC
Confidence 34567899998 8999999999885432 224578999999999999999974 445689999999999999999999
Q ss_pred CCCcccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHH
Q 011833 137 AGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQ 216 (476)
Q Consensus 137 ~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (476)
||.|+.+.... ..
T Consensus 102 ~G~S~~~~~~~------------------------------------------~~------------------------- 114 (377)
T d1k8qa_ 102 NTWARRNLYYS------------------------------------------PD------------------------- 114 (377)
T ss_dssp STTSCEESSSC------------------------------------------TT-------------------------
T ss_pred CCCCCCCCCCC------------------------------------------Cc-------------------------
Confidence 99998754311 00
Q ss_pred hhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc---c
Q 011833 217 KQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS---L 293 (476)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~---~ 293 (476)
-...+.++++++..+|++++|+++++..+.+ ++++|||||||.+++.++..+| ..+++++++... .
T Consensus 115 ----~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~--~v~lvGhS~GG~ia~~~a~~~p-----~~~~~l~~~~~~~~~~ 183 (377)
T d1k8qa_ 115 ----SVEFWAFSFDEMAKYDLPATIDFILKKTGQD--KLHYVGHSQGTTIGFIAFSTNP-----KLAKRIKTFYALAPVA 183 (377)
T ss_dssp ----STTTTCCCHHHHHHTHHHHHHHHHHHHHCCS--CEEEEEETHHHHHHHHHHHHCH-----HHHTTEEEEEEESCCS
T ss_pred ----chhhccCCHHHHhhhhHHHHHHHHHHHcCCC--CEEEEEecchHHHHHHHHHhhh-----hhhhhceeEeeccccc
Confidence 0013468899999999999999999998875 9999999999999999999987 666666655432 2
Q ss_pred cccCChhhHHHhhcCcchhhh---ccCCcCChHHHHH---hhccCCC-CchHHHHHHHHhhc-CCCCCCHHHHHHHhhhc
Q 011833 294 DYRPSNSLLRLLLPLSDPIQA---LNVPVIPLGTFLA---AIHPFAS-SPPYVLSWLKFLIS-APDMMHPELFEKLIFSN 365 (476)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 365 (476)
...........+......... ......+...+.. ....... .......+...... ....++......+....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (377)
T d1k8qa_ 184 TVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHN 263 (377)
T ss_dssp CCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTC
T ss_pred cccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCcccccHHHhhhhhhcc
Confidence 222111111111111100000 0001111111111 1111111 11111122211111 23345566666666666
Q ss_pred cCCCCHHHHHHHHHHHHhCCccccCCcc------------cccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCc
Q 011833 366 FGNIPTKLISQLTTVFQEGGLCDRSGTF------------FYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHL 433 (476)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~------------~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~ 433 (476)
....+...+.+|.+.+..+.+..++... .....+.++++|+|+|+|++|.++|++.++++.+.+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~~~~~~~l~~~lp~~- 342 (377)
T d1k8qa_ 264 PAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNL- 342 (377)
T ss_dssp CCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTTE-
T ss_pred cccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccCHHHHHHHHHHCCCC-
Confidence 6677778888888888877766554211 112257889999999999999999999999999999975
Q ss_pred eeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 434 VSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 434 ~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
+.++++ +++||++++++.+++++|++.|++||+.
T Consensus 343 ~~~~~i-----~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 343 IYHRKI-----PPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp EEEEEE-----TTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred eEEEEe-----CCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 456666 8999999999999999999999999985
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.96 E-value=2e-27 Score=227.72 Aligned_cols=280 Identities=18% Similarity=0.194 Sum_probs=171.6
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccC
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
..|.+ +|.+|++..+.+. .+|+|||+||++.++..|. ..+++.|.++||+|+++|+||||.|+.....
T Consensus 3 ~~~~~--g~~~i~y~~~G~~-----~~p~vvl~HG~~~~~~~~~----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~- 70 (297)
T d1q0ra_ 3 RIVPS--GDVELWSDDFGDP-----ADPALLLVMGGNLSALGWP----DEFARRLADGGLHVIRYDHRDTGRSTTRDFA- 70 (297)
T ss_dssp EEEEE--TTEEEEEEEESCT-----TSCEEEEECCTTCCGGGSC----HHHHHHHHTTTCEEEEECCTTSTTSCCCCTT-
T ss_pred eEEEE--CCEEEEEEEecCC-----CCCEEEEECCCCcChhHHH----HHHHHHHHhCCCEEEEEeCCCCccccccccc-
Confidence 34444 8899999888432 3689999999999998883 3578899999999999999999999653320
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
...|
T Consensus 71 ----------------------------------------------------------------------------~~~~ 74 (297)
T d1q0ra_ 71 ----------------------------------------------------------------------------AHPY 74 (297)
T ss_dssp ----------------------------------------------------------------------------TSCC
T ss_pred ----------------------------------------------------------------------------cccc
Confidence 1135
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLP 307 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~ 307 (476)
++++++ +|+.++++.+ +. ++++++||||||.+++.+|..+| ++|+++|++++................
T Consensus 75 ~~~~~~-~d~~~ll~~l----~~--~~~~lvGhS~Gg~~a~~~a~~~P-----~~v~~lvli~~~~~~~~~~~~~~~~~~ 142 (297)
T d1q0ra_ 75 GFGELA-ADAVAVLDGW----GV--DRAHVVGLSMGATITQVIALDHH-----DRLSSLTMLLGGGLDIDFDANIERVMR 142 (297)
T ss_dssp CHHHHH-HHHHHHHHHT----TC--SSEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCCTTCCHHHHHHHHHH
T ss_pred ccchhh-hhhccccccc----cc--cceeeccccccchhhhhhhcccc-----cceeeeEEEccccccccchhhhHHHhh
Confidence 667766 6777776654 33 38999999999999999999998 899999999876544433221111110
Q ss_pred CcchhhhccCCcCChHHHHHh---hccCCCCc-hHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHH-HHH
Q 011833 308 LSDPIQALNVPVIPLGTFLAA---IHPFASSP-PYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTT-VFQ 382 (476)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 382 (476)
...... ..+. +...+... ........ ..+...+... .................+.. .+.
T Consensus 143 ~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 206 (297)
T d1q0ra_ 143 GEPTLD--GLPG-PQQPFLDALALMNQPAEGRAAEVAKRVSKW-------------RILSGTGVPFDDAEYARWEERAID 206 (297)
T ss_dssp TCCCSS--CSCC-CCHHHHHHHHHHHSCCCSHHHHHHHHHHHH-------------HHHHCSSSCCCHHHHHHHHHHHHH
T ss_pred hhhhhh--hhhh-hhHHHHHHHHHhccccchhhHHHHHHHHHH-------------hhhccccccchHHHHHHHHHHhhh
Confidence 000000 0000 00111111 11100000 0000000000 00000000111111112211 111
Q ss_pred h-CCc-c----cc---CCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccc
Q 011833 383 E-GGL-C----DR---SGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLV 453 (476)
Q Consensus 383 ~-~~~-~----~~---~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~ 453 (476)
. ..+ . .. ....+....+++|++||++|+|++|.++|++.++.+.+.+|+. +++++ +++||+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~p~~--~~~~i-----~~~gH~--- 276 (297)
T d1q0ra_ 207 HAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTA--RLAEI-----PGMGHA--- 276 (297)
T ss_dssp HTTTCCSCCCGGGGCCCCCGGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTTE--EEEEE-----TTCCSS---
T ss_pred hccccchhhhhhhhhhhccccchhhhhccCCceEEEEeCCCCCCCHHHHHHHHHhCCCC--EEEEE-----CCCCCc---
Confidence 1 111 0 00 0122334478899999999999999999999999999999975 67777 899994
Q ss_pred cccCCccchhHHHHHHHHhh
Q 011833 454 GSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 454 ~~~~~~~~v~~~i~~fL~~~ 473 (476)
...+.++++.+.|++||++.
T Consensus 277 ~~~e~p~~~~~~i~~~l~~~ 296 (297)
T d1q0ra_ 277 LPSSVHGPLAEVILAHTRSA 296 (297)
T ss_dssp CCGGGHHHHHHHHHHHHHHT
T ss_pred chhhCHHHHHHHHHHHHHhh
Confidence 45788999999999999864
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.96 E-value=1.6e-27 Score=224.59 Aligned_cols=262 Identities=17% Similarity=0.251 Sum_probs=162.7
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcc---eeecCCCCCHHHHHHhCCCcEEEecCCCCCCccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAI---GYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~---~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~ 142 (476)
+.++|.+ ||.++++..+. .+|||||+||++++.. .| ..+...|+ +||+|+++|+||||.|+.
T Consensus 3 ~~~~~~~--dg~~l~y~~~G-------~g~~vvllHG~~~~~~~~~~~-----~~~~~~l~-~~~~v~~~D~~G~G~S~~ 67 (268)
T d1j1ia_ 3 VERFVNA--GGVETRYLEAG-------KGQPVILIHGGGAGAESEGNW-----RNVIPILA-RHYRVIAMDMLGFGKTAK 67 (268)
T ss_dssp EEEEEEE--TTEEEEEEEEC-------CSSEEEEECCCSTTCCHHHHH-----TTTHHHHT-TTSEEEEECCTTSTTSCC
T ss_pred cCeEEEE--CCEEEEEEEEc-------CCCeEEEECCCCCCccHHHHH-----HHHHHHHh-cCCEEEEEcccccccccC
Confidence 3557765 99999887752 3578999999987654 35 46677775 589999999999999965
Q ss_pred ccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLI 222 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (476)
...
T Consensus 68 ~~~----------------------------------------------------------------------------- 70 (268)
T d1j1ia_ 68 PDI----------------------------------------------------------------------------- 70 (268)
T ss_dssp CSS-----------------------------------------------------------------------------
T ss_pred Ccc-----------------------------------------------------------------------------
Confidence 322
Q ss_pred cccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhH
Q 011833 223 VKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLL 302 (476)
Q Consensus 223 ~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~ 302 (476)
++++++++ +|+.++++.+ +. +.+++++||||||.+++.++.++| ++|+++|+++++..........
T Consensus 71 ---~~~~~~~~-~~~~~~i~~l----~~-~~~~~liG~S~Gg~ia~~~a~~~p-----~~v~~lil~~~~~~~~~~~~~~ 136 (268)
T d1j1ia_ 71 ---EYTQDRRI-RHLHDFIKAM----NF-DGKVSIVGNSMGGATGLGVSVLHS-----ELVNALVLMGSAGLVVEIHEDL 136 (268)
T ss_dssp ---CCCHHHHH-HHHHHHHHHS----CC-SSCEEEEEEHHHHHHHHHHHHHCG-----GGEEEEEEESCCBCCCC-----
T ss_pred ---cccccccc-ccchhhHHHh----hh-cccceeeeccccccccchhhccCh-----HhhheeeecCCCccccccchhh
Confidence 24445555 6666666543 22 247999999999999999999988 8999999999865433321111
Q ss_pred HHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHH
Q 011833 303 RLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQ 382 (476)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (476)
+... .........................+........................+.
T Consensus 137 ~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (268)
T d1j1ia_ 137 RPII------------------------NYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIR 192 (268)
T ss_dssp -----------------------------CCSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred hhhh------------------------hhhhhhhhhHHHHHHHhhhhhhhhhhhhHHHHHhhhhhhhhhhhhhhhhhhh
Confidence 1100 0000000111111111111111222222221111100001111111111111
Q ss_pred -hCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccc
Q 011833 383 -EGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQ 461 (476)
Q Consensus 383 -~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~ 461 (476)
... .....+.+.++++|+|+|+|++|.++|++.++++.+.+++. +++++ +++||+.+ .+.|++
T Consensus 193 ~~~~------~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~e~p~~ 256 (268)
T d1j1ia_ 193 EQGG------LFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDS--WGYII-----PHCGHWAM---IEHPED 256 (268)
T ss_dssp HHTS------SBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTE--EEEEE-----SSCCSCHH---HHSHHH
T ss_pred cccc------ccchhhhHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC--EEEEE-----CCCCCchH---HhCHHH
Confidence 111 11123467889999999999999999999999999999875 67777 89999554 678899
Q ss_pred hhHHHHHHHHhh
Q 011833 462 VYPCIIEFLTRH 473 (476)
Q Consensus 462 v~~~i~~fL~~~ 473 (476)
+.+.|.+||+++
T Consensus 257 ~~~~i~~FL~~r 268 (268)
T d1j1ia_ 257 FANATLSFLSLR 268 (268)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHcCC
Confidence 999999999874
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.95 E-value=7.1e-28 Score=227.46 Aligned_cols=278 Identities=14% Similarity=0.179 Sum_probs=167.7
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccccc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEF 146 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~ 146 (476)
+.++.+ ||.++++..+... ..+|+|||+||+++++..| ......+.++||+|+++|+||||.|+....
T Consensus 4 ~~~~~~--~g~~i~y~~~g~~----~~~~~iv~lHG~~g~~~~~-----~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~- 71 (290)
T d1mtza_ 4 ENYAKV--NGIYIYYKLCKAP----EEKAKLMTMHGGPGMSHDY-----LLSLRDMTKEGITVLFYDQFGCGRSEEPDQ- 71 (290)
T ss_dssp EEEEEE--TTEEEEEEEECCS----SCSEEEEEECCTTTCCSGG-----GGGGGGGGGGTEEEEEECCTTSTTSCCCCG-
T ss_pred cCeEEE--CCEEEEEEEcCCC----CCCCeEEEECCCCCchHHH-----HHHHHHHHHCCCEEEEEeCCCCcccccccc-
Confidence 457776 9999988777432 2468899999998777777 356667778899999999999999975321
Q ss_pred CccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccC
Q 011833 147 GEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKND 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
..
T Consensus 72 ------------------------------------------------------------------------------~~ 73 (290)
T d1mtza_ 72 ------------------------------------------------------------------------------SK 73 (290)
T ss_dssp ------------------------------------------------------------------------------GG
T ss_pred ------------------------------------------------------------------------------cc
Confidence 13
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhh
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLL 306 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~ 306 (476)
|++++++ +|+.++++.+. +. +++++|||||||.+++.++.++| .+|++++++++.............+.
T Consensus 74 ~~~~~~~-~~l~~ll~~l~---~~--~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~ 142 (290)
T d1mtza_ 74 FTIDYGV-EEAEALRSKLF---GN--EKVFLMGSSYGGALALAYAVKYQ-----DHLKGLIVSGGLSSVPLTVKEMNRLI 142 (290)
T ss_dssp CSHHHHH-HHHHHHHHHHH---TT--CCEEEEEETHHHHHHHHHHHHHG-----GGEEEEEEESCCSBHHHHHHHHHHHH
T ss_pred ccccchh-hhhhhhhcccc---cc--cccceecccccchhhhhhhhcCh-----hhheeeeecccccCcccchhhhhhhh
Confidence 5666666 77877777653 22 38999999999999999999998 89999999987654322111111111
Q ss_pred cCcchhhhccCCcCChHHHHHhh-cc-CCCCchH---HHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHH
Q 011833 307 PLSDPIQALNVPVIPLGTFLAAI-HP-FASSPPY---VLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVF 381 (476)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (476)
....... ...+... .. ......+ ...+............++..+.+..... .......
T Consensus 143 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 205 (290)
T d1mtza_ 143 DELPAKY---------RDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAER--------RNVYRIM 205 (290)
T ss_dssp HTSCHHH---------HHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHH--------SSHHHHH
T ss_pred hhhhHHH---------HHHHHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhh--------hhhhhhh
Confidence 0000000 0000000 00 0011110 0011111111122222222221111000 0000001
Q ss_pred Hh-CCcccc--CCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCC
Q 011833 382 QE-GGLCDR--SGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLA 458 (476)
Q Consensus 382 ~~-~~~~~~--~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~ 458 (476)
.. ..+... ....+....+.++++|+++++|++|.++| +.++.+.+.+++. +++++ +++||+.+ .+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~-~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~e~ 274 (290)
T d1mtza_ 206 NGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTP-NVARVIHEKIAGS--ELHVF-----RDCSHLTM---WED 274 (290)
T ss_dssp TCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEEETTCSSCH-HHHHHHHHHSTTC--EEEEE-----TTCCSCHH---HHS
T ss_pred cchhHHhHhhhhhcccHHHHhhcccceEEEEEeCCCCCCH-HHHHHHHHHCCCC--EEEEE-----CCCCCchH---HhC
Confidence 00 001100 01122344678899999999999999875 6788999999875 67777 89999554 578
Q ss_pred ccchhHHHHHHHHhh
Q 011833 459 AYQVYPCIIEFLTRH 473 (476)
Q Consensus 459 ~~~v~~~i~~fL~~~ 473 (476)
|+++.+.|.+||++|
T Consensus 275 p~~~~~~i~~FL~~h 289 (290)
T d1mtza_ 275 REGYNKLLSDFILKH 289 (290)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHh
Confidence 899999999999987
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.95 E-value=2.5e-27 Score=223.59 Aligned_cols=267 Identities=16% Similarity=0.224 Sum_probs=161.8
Q ss_pred eEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCc
Q 011833 69 YVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGE 148 (476)
Q Consensus 69 ~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~ 148 (476)
+|+ |.||.+|++..+. .++||||+||+++++..| ..+++.|+++||+|+++|+||||.|+....
T Consensus 2 ~~~-t~dG~~l~y~~~G-------~g~~ivlvHG~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~--- 65 (274)
T d1a8qa_ 2 ICT-TRDGVEIFYKDWG-------QGRPVVFIHGWPLNGDAW-----QDQLKAVVDAGYRGIAHDRRGHGHSTPVWD--- 65 (274)
T ss_dssp EEE-CTTSCEEEEEEEC-------SSSEEEEECCTTCCGGGG-----HHHHHHHHHTTCEEEEECCTTSTTSCCCSS---
T ss_pred eEE-CcCCCEEEEEEEC-------CCCeEEEECCCCCCHHHH-----HHHHHHHHHCCCEEEEEeCCCCcccccccc---
Confidence 566 7999999988762 257899999999999999 588899999999999999999999965331
Q ss_pred cccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCC
Q 011833 149 DSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWD 228 (476)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (476)
.++
T Consensus 66 -----------------------------------------------------------------------------~~~ 68 (274)
T d1a8qa_ 66 -----------------------------------------------------------------------------GYD 68 (274)
T ss_dssp -----------------------------------------------------------------------------CCS
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 245
Q ss_pred chhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcC
Q 011833 229 FDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPL 308 (476)
Q Consensus 229 ~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~ 308 (476)
+.+++ +|+.++++.+ +. +++++|||||||.+++.+++.++ +++|++++++++............
T Consensus 69 ~~~~~-~dl~~~l~~l----~~--~~~~lvGhS~Gg~~~~~~~a~~~----p~~v~~~~~~~~~~~~~~~~~~~~----- 132 (274)
T d1a8qa_ 69 FDTFA-DDLNDLLTDL----DL--RDVTLVAHSMGGGELARYVGRHG----TGRLRSAVLLSAIPPVMIKSDKNP----- 132 (274)
T ss_dssp HHHHH-HHHHHHHHHT----TC--CSEEEEEETTHHHHHHHHHHHHC----STTEEEEEEESCCCSCCBCCSSCT-----
T ss_pred chhhH-HHHHHHHHHh----hh--hhhcccccccccchHHHHHHHhh----hccceeEEEEeccCccchhhhhcc-----
Confidence 55555 6777666654 22 48999999999999988776653 378999999986433221100000
Q ss_pred cchhhhccCCcCChHHHHHhhccC-CC-CchHHHHHHHHhhcC---CCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHh
Q 011833 309 SDPIQALNVPVIPLGTFLAAIHPF-AS-SPPYVLSWLKFLISA---PDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQE 383 (476)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (476)
.... ......+... .. ...+........... ...........+..... .............+..
T Consensus 133 ---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 201 (274)
T d1a8qa_ 133 ---------DGVP-DEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAM-AQTIEGGVRCVDAFGY 201 (274)
T ss_dssp ---------TSBC-HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHT-TSCHHHHHHHHHHHHH
T ss_pred ---------chhh-HHHHHHHHhhhhhhhHHHhhhhhhhhhhccccchhhhhhHHHHHHHhhh-ccchhhhhhHHHHhhc
Confidence 0000 0000000000 00 000000111111111 11111222222211111 1111222222221111
Q ss_pred CCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHH-HHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccch
Q 011833 384 GGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAV-YETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQV 462 (476)
Q Consensus 384 ~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~-~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v 462 (476)
.++.+.+.++++|+|+|+|++|.++|.+.. +.+.+.+++. +++++ +++||+.++. .+.+++|
T Consensus 202 ---------~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~~~-~~~p~~~ 264 (274)
T d1a8qa_ 202 ---------TDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNA--ELKVY-----EGSSHGIAMV-PGDKEKF 264 (274)
T ss_dssp ---------CCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTC--EEEEE-----TTCCTTTTTS-TTHHHHH
T ss_pred ---------cchHHHHHhccceeeeeccCCCCCcCHHHHHHHHHHhCCCC--EEEEE-----CCCCCccccc-ccCHHHH
Confidence 122346788999999999999999998764 6677788875 67777 8999965432 3557899
Q ss_pred hHHHHHHHHh
Q 011833 463 YPCIIEFLTR 472 (476)
Q Consensus 463 ~~~i~~fL~~ 472 (476)
.+.|++||++
T Consensus 265 ~~~i~~FL~k 274 (274)
T d1a8qa_ 265 NRDLLEFLNK 274 (274)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHCc
Confidence 9999999985
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=3.2e-27 Score=228.48 Aligned_cols=285 Identities=15% Similarity=0.179 Sum_probs=169.6
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccccc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEF 146 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~ 146 (476)
..+|+ ++||.+|++..+. .+|+|||+||+++++..| ..+++.|+++||+|+++|+||||.|......
T Consensus 13 ~~~v~-~~~g~~i~y~~~G-------~gp~vlllHG~~~~~~~~-----~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~ 79 (322)
T d1zd3a2 13 HGYVT-VKPRVRLHFVELG-------SGPAVCLCHGFPESWYSW-----RYQIPALAQAGYRVLAMDMKGYGESSAPPEI 79 (322)
T ss_dssp EEEEE-EETTEEEEEEEEC-------CSSEEEEECCTTCCGGGG-----TTHHHHHHHTTCEEEEEECTTSTTSCCCSCG
T ss_pred eeEEE-ECCCCEEEEEEEc-------CCCeEEEECCCCCCHHHH-----HHHHHHHHHCCCEEEEecccccccccccccc
Confidence 34666 5899999998762 358999999999999999 6899999999999999999999999764320
Q ss_pred CccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccC
Q 011833 147 GEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKND 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
..
T Consensus 80 ------------------------------------------------------------------------------~~ 81 (322)
T d1zd3a2 80 ------------------------------------------------------------------------------EE 81 (322)
T ss_dssp ------------------------------------------------------------------------------GG
T ss_pred ------------------------------------------------------------------------------cc
Confidence 12
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCCh-hhHHHh
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSN-SLLRLL 305 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~-~~~~~~ 305 (476)
|++++++ +|+.++++.+ +. +++++|||||||.+++.+|.++| .+|+++|+++++....... ......
T Consensus 82 ~~~~~~~-~~i~~l~~~l----~~--~~~~lvGhS~Gg~va~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~ 149 (322)
T d1zd3a2 82 YCMEVLC-KEMVTFLDKL----GL--SQAVFIGHDWGGMLVWYMALFYP-----ERVRAVASLNTPFIPANPNMSPLESI 149 (322)
T ss_dssp GSHHHHH-HHHHHHHHHH----TC--SCEEEEEETHHHHHHHHHHHHCT-----TTEEEEEEESCCCCCCCSSSCHHHHH
T ss_pred ccccccc-hhhhhhhhcc----cc--cccccccccchHHHHHHHHHhCC-----ccccceEEEcccccccccccchhhhh
Confidence 4555555 6666666554 33 38999999999999999999998 8899999998754332211 111111
Q ss_pred h--cCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcC--CCCCCHHHHHHHhhhcc---------CCCCHH
Q 011833 306 L--PLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISA--PDMMHPELFEKLIFSNF---------GNIPTK 372 (476)
Q Consensus 306 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---------~~~~~~ 372 (476)
. +..........+.+......... ...+...... ................. ......
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (322)
T d1zd3a2 150 KANPVFDYQLYFQEPGVAEAELEQNL----------SRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEE 219 (322)
T ss_dssp HTCGGGHHHHHTTSTTHHHHHHHHTH----------HHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHH
T ss_pred hccchhhhHHhhhccchhhhhhhhhH----------HHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHH
Confidence 0 00000000000000000000000 0001000000 00000000000000000 001111
Q ss_pred HHHHHHHHHHhCCcc----ccC-----CcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCC
Q 011833 373 LISQLTTVFQEGGLC----DRS-----GTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPR 443 (476)
Q Consensus 373 ~~~~~~~~~~~~~~~----~~~-----g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~ 443 (476)
....+...+....+. ... ..........++++|||+|+|++|.+++++..+++.+.+++. +++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~--~~~~i---- 293 (322)
T d1zd3a2 220 EIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHL--KRGHI---- 293 (322)
T ss_dssp HHHHHHHHHHHHTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTTC--EEEEE----
T ss_pred HHHHHHHHHhhcccccccccccccccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC--EEEEE----
Confidence 111122111111100 000 011223456789999999999999999999999999989875 67777
Q ss_pred CCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 444 GPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 444 ~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
+++||+. ..|.|++|.+.|.+||+++.
T Consensus 294 -~~~gH~~---~~e~p~~v~~~i~~FL~~~~ 320 (322)
T d1zd3a2 294 -EDCGHWT---QMDKPTEVNQILIKWLDSDA 320 (322)
T ss_dssp -TTCCSCH---HHHSHHHHHHHHHHHHHHHT
T ss_pred -CCCCCch---HHhCHHHHHHHHHHHHhhcC
Confidence 8999944 47889999999999999875
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.95 E-value=3.2e-27 Score=224.78 Aligned_cols=281 Identities=13% Similarity=0.103 Sum_probs=169.6
Q ss_pred CceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccc
Q 011833 65 DELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 65 ~e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
-+.+++.+ ||.++++..+.+. .+|+|||+||++++...| ..+++.|+ +||+|+++|+||||.|+++.
T Consensus 7 ~~~~~i~~--~g~~i~y~~~G~~-----~~p~lvllHG~~~~~~~~-----~~~~~~L~-~~~~vi~~d~~G~G~S~~~~ 73 (291)
T d1bn7a_ 7 FDPHYVEV--LGERMHYVDVGPR-----DGTPVLFLHGNPTSSYLW-----RNIIPHVA-PSHRCIAPDLIGMGKSDKPD 73 (291)
T ss_dssp CCCEEEEE--TTEEEEEEEESCS-----SSSCEEEECCTTCCGGGG-----TTTHHHHT-TTSCEEEECCTTSTTSCCCS
T ss_pred CCCeEEEE--CCEEEEEEEeCCC-----CCCeEEEECCCCCCHHHH-----HHHHHHHh-cCCEEEEEeCCCCccccccc
Confidence 45678876 9999999887533 368999999999999999 68888885 49999999999999996532
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
.
T Consensus 74 ~------------------------------------------------------------------------------- 74 (291)
T d1bn7a_ 74 L------------------------------------------------------------------------------- 74 (291)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHH
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRL 304 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~ 304 (476)
.+++++++ +|+.++++.+ +. ++++++||||||.+++.++.++| +++++++++++.............
T Consensus 75 -~~~~~~~~-~~l~~~l~~l----~~--~~~~lvGhS~Gg~ia~~~a~~~p-----~~~~~li~~~~~~~~~~~~~~~~~ 141 (291)
T d1bn7a_ 75 -DYFFDDHV-RYLDAFIEAL----GL--EEVVLVIHDWGSALGFHWAKRNP-----ERVKGIACMEFIRPIPTWDEWPEF 141 (291)
T ss_dssp -CCCHHHHH-HHHHHHHHHT----TC--CSEEEEEEHHHHHHHHHHHHHCG-----GGEEEEEEEEECCCBCSGGGSCHH
T ss_pred -ccchhHHH-HHHhhhhhhh----cc--ccccccccccccchhHHHHHhCC-----cceeeeeeeccccCCccchhhhhh
Confidence 35556666 6777666654 33 38999999999999999999998 899999999865543322110000
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHh-
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQE- 383 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 383 (476)
.... ...+.. ......... ....+....+... .......+....+............+..+...+..
T Consensus 142 ~~~~---~~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (291)
T d1bn7a_ 142 ARET---FQAFRT-----ADVGRELII--DQNAFIEGVLPKC--VVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIA 209 (291)
T ss_dssp HHHH---HHHHTS-----TTHHHHHHT--TSCHHHHTHHHHT--CSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBT
T ss_pred hhhH---HHHHhh-----hhhHHHhhh--hhhhhHHhhhhhh--ccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhh
Confidence 0000 000000 000000000 0000111111110 01112222222222221111111112222111110
Q ss_pred CCccccC-CcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccch
Q 011833 384 GGLCDRS-GTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQV 462 (476)
Q Consensus 384 ~~~~~~~-g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v 462 (476)
+...... ........+.++++|+|+++|++|.++|++.++++.+.+++. +++++ +++||+ ...+.|+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~---~~~e~p~~v 279 (291)
T d1bn7a_ 210 GEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNC--KTVDI-----GPGLHY---LQEDNPDLI 279 (291)
T ss_dssp TBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTTE--EEEEE-----EEESSC---GGGTCHHHH
T ss_pred hhhchhhhhhhhhhhhhhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCCC--EEEEE-----CCCCCc---hHHhCHHHH
Confidence 0000000 000111245678999999999999999999999999999875 66666 799994 447889999
Q ss_pred hHHHHHHHHh
Q 011833 463 YPCIIEFLTR 472 (476)
Q Consensus 463 ~~~i~~fL~~ 472 (476)
.+.|.+||+.
T Consensus 280 ~~~i~~fL~~ 289 (291)
T d1bn7a_ 280 GSEIARWLPG 289 (291)
T ss_dssp HHHHHHHSGG
T ss_pred HHHHHHHHHh
Confidence 9999999986
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.95 E-value=8.2e-27 Score=220.01 Aligned_cols=264 Identities=13% Similarity=0.130 Sum_probs=156.2
Q ss_pred eEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCc
Q 011833 69 YVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGE 148 (476)
Q Consensus 69 ~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~ 148 (476)
++.+ +|.+++++.+. .+|||||+||++.+...|.. ...++..|+ +||+|+++|+||||.|......
T Consensus 7 ~i~~--~G~~~~Y~~~G-------~G~pvvllHG~~~~~~~~~~--~~~~~~~l~-~~~~vi~~Dl~G~G~S~~~~~~-- 72 (271)
T d1uk8a_ 7 SILA--AGVLTNYHDVG-------EGQPVILIHGSGPGVSAYAN--WRLTIPALS-KFYRVIAPDMVGFGFTDRPENY-- 72 (271)
T ss_dssp EEEE--TTEEEEEEEEC-------CSSEEEEECCCSTTCCHHHH--HTTTHHHHT-TTSEEEEECCTTSTTSCCCTTC--
T ss_pred EEEE--CCEEEEEEEEe-------eCCeEEEECCCCCCccHHHH--HHHHHHHHh-CCCEEEEEeCCCCCCccccccc--
Confidence 4544 99999988762 35899999999877655420 035567775 5999999999999999653320
Q ss_pred cccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCC
Q 011833 149 DSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWD 228 (476)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (476)
.++
T Consensus 73 -----------------------------------------------------------------------------~~~ 75 (271)
T d1uk8a_ 73 -----------------------------------------------------------------------------NYS 75 (271)
T ss_dssp -----------------------------------------------------------------------------CCC
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 122
Q ss_pred chhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcC
Q 011833 229 FDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPL 308 (476)
Q Consensus 229 ~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~ 308 (476)
++ +....+..+.+..+.+ +++++||||||.+++.++.++| .+++++|+++++................
T Consensus 76 ~~-----~~~~~~~~~~~~l~~~--~~~lvG~S~Gg~ia~~~a~~~p-----~~~~~lil~~~~~~~~~~~~~~~~~~~~ 143 (271)
T d1uk8a_ 76 KD-----SWVDHIIGIMDALEIE--KAHIVGNAFGGGLAIATALRYS-----ERVDRMVLMGAAGTRFDVTEGLNAVWGY 143 (271)
T ss_dssp HH-----HHHHHHHHHHHHTTCC--SEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCCSCCCCCHHHHHHHTC
T ss_pred cc-----ccchhhhhhhhhhcCC--CceEeeccccceeehHHHHhhh-----ccchheeecccCCCcccchhhhhhhhhc
Confidence 22 3333444444554544 8999999999999999999988 8899999998765433322111111100
Q ss_pred cchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccc
Q 011833 309 SDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCD 388 (476)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (476)
. +...... ..+............+............ . ....+...........
T Consensus 144 ~-----------~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~ 196 (271)
T d1uk8a_ 144 T-----------PSIENMR-------------NLLDIFAYDRSLVTDELARLRYEASIQP-G--FQESFSSMFPEPRQRW 196 (271)
T ss_dssp C-----------SCHHHHH-------------HHHHHHCSCGGGCCHHHHHHHHHHHTST-T--HHHHHHTTSCSSTHHH
T ss_pred c-----------chhHHHH-------------HHHHHHhhhcccchhHHHHHHHhhhhch-h--HHHHHHhhcchhhhhh
Confidence 0 0000000 0010000011111111111111000000 0 0000000000000000
Q ss_pred cCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHH
Q 011833 389 RSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIE 468 (476)
Q Consensus 389 ~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~ 468 (476)
........+.+.++++|+|+|+|++|.++|++..+.+.+.+++. +++++ +++||+.+ .+.|+++.+.|.+
T Consensus 197 ~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~e~p~~~~~~i~~ 266 (271)
T d1uk8a_ 197 IDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRA--QLHVF-----GRCGHWTQ---IEQTDRFNRLVVE 266 (271)
T ss_dssp HHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTE--EEEEE-----SSCCSCHH---HHTHHHHHHHHHH
T ss_pred hhhccccHHHHHhhccceeEEecCCCCCcCHHHHHHHHHhCCCC--EEEEE-----CCCCCchH---HHCHHHHHHHHHH
Confidence 00001112367889999999999999999999999999999875 67777 89999544 6789999999999
Q ss_pred HHHh
Q 011833 469 FLTR 472 (476)
Q Consensus 469 fL~~ 472 (476)
||++
T Consensus 267 Fl~e 270 (271)
T d1uk8a_ 267 FFNE 270 (271)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9986
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.94 E-value=3.8e-27 Score=232.97 Aligned_cols=233 Identities=18% Similarity=0.240 Sum_probs=152.5
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCC-CCccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGA-GLSAHRV 144 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~-G~S~~~~ 144 (476)
+.|.+. +.||..|++|.+.|....+.++++||++||++++...| ..++++|+++||+|+++|+||| |.|++..
T Consensus 5 ~~h~~~-~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~~~-----~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~ 78 (302)
T d1thta_ 5 IAHVLR-VNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHF-----AGLAEYLSTNGFHVFRYDSLHHVGLSSGSI 78 (302)
T ss_dssp EEEEEE-ETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGG-----HHHHHHHHTTTCCEEEECCCBCC-------
T ss_pred eeeEEE-cCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHHHH-----HHHHHHHHHCCCEEEEecCCCCCCCCCCcc
Confidence 456777 69999999999988765556788999999999999888 5899999999999999999998 8875422
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
.
T Consensus 79 ~------------------------------------------------------------------------------- 79 (302)
T d1thta_ 79 D------------------------------------------------------------------------------- 79 (302)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHH
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRL 304 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~ 304 (476)
++++.++. +|+.++++++.+. +. ++++++||||||.+++.+|.. .+++++|+.+|....... .+.
T Consensus 80 -~~~~~~~~-~dl~~vi~~l~~~-~~--~~i~lvG~SmGG~ial~~A~~-------~~v~~li~~~g~~~~~~~---~~~ 144 (302)
T d1thta_ 80 -EFTMTTGK-NSLCTVYHWLQTK-GT--QNIGLIAASLSARVAYEVISD-------LELSFLITAVGVVNLRDT---LEK 144 (302)
T ss_dssp -CCCHHHHH-HHHHHHHHHHHHT-TC--CCEEEEEETHHHHHHHHHTTT-------SCCSEEEEESCCSCHHHH---HHH
T ss_pred -CCCHHHHH-HHHHHHHHhhhcc-CC--ceeEEEEEchHHHHHHHHhcc-------cccceeEeecccccHHHH---HHH
Confidence 34555555 7999999999765 22 489999999999999888865 458899998877543321 111
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhC
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEG 384 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (476)
...... ..... ..+....... . .. .. ...+.......
T Consensus 145 ~~~~~~--------------------~~~~~-----~~~~~~~~~~-~-~~-------------~~---~~~~~~~~~~~ 181 (302)
T d1thta_ 145 ALGFDY--------------------LSLPI-----DELPNDLDFE-G-HK-------------LG---SEVFVRDCFEH 181 (302)
T ss_dssp HHSSCG--------------------GGSCG-----GGCCSEEEET-T-EE-------------EE---HHHHHHHHHHT
T ss_pred HHhhcc--------------------chhhh-----hhcccccccc-c-cc-------------hh---hHHHHHHHHHh
Confidence 110000 00000 0000000000 0 00 00 00000000000
Q ss_pred CccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcc
Q 011833 385 GLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAH 449 (476)
Q Consensus 385 ~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH 449 (476)
... ......+.+.++++|+|+++|++|.++|++.++++++.++...+++.++ ++++|
T Consensus 182 ~~~---~~~~~~~~~~~i~~PvLii~G~~D~~V~~~~~~~l~~~i~s~~~kl~~~-----~g~~H 238 (302)
T d1thta_ 182 HWD---TLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSL-----LGSSH 238 (302)
T ss_dssp TCS---SHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEE-----TTCCS
T ss_pred HHH---HHHHHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhCCCCCceEEEe-----cCCCc
Confidence 000 0001123577899999999999999999999999999999877888888 89999
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.94 E-value=3.1e-26 Score=218.35 Aligned_cols=269 Identities=16% Similarity=0.161 Sum_probs=156.0
Q ss_pred EeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcce---eecCCCCCHHHHHHhCCCcEEEecCCCCCCccccccc
Q 011833 70 VAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIG---YDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEF 146 (476)
Q Consensus 70 v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~---~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~ 146 (476)
..++.++..+++....+ ..+|+|||+||++++... | ..+++.|++ ||+|+++|+||||.|+.....
T Consensus 7 ~~~~~~~~~~h~~~~G~-----~~~p~ivllHG~~~~~~~~~~~-----~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~ 75 (281)
T d1c4xa_ 7 KRFPSGTLASHALVAGD-----PQSPAVVLLHGAGPGAHAASNW-----RPIIPDLAE-NFFVVAPDLIGFGQSEYPETY 75 (281)
T ss_dssp EEECCTTSCEEEEEESC-----TTSCEEEEECCCSTTCCHHHHH-----GGGHHHHHT-TSEEEEECCTTSTTSCCCSSC
T ss_pred EEEccCCEEEEEEEEec-----CCCCEEEEECCCCCCCcHHHHH-----HHHHHHHhC-CCEEEEEeCCCCccccccccc
Confidence 33456778888877643 246999999999876543 5 467788864 899999999999999764320
Q ss_pred CccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccC
Q 011833 147 GEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKND 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
. .. . .
T Consensus 76 ~----------------------------------------------------~~----------~-------------~ 80 (281)
T d1c4xa_ 76 P----------------------------------------------------GH----------I-------------M 80 (281)
T ss_dssp C----------------------------------------------------SS----------H-------------H
T ss_pred c----------------------------------------------------cc----------c-------------h
Confidence 0 00 0 0
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCCh-hhHHHh
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSN-SLLRLL 305 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~-~~~~~~ 305 (476)
+++++++ +|+.++++.+ +. ++++++||||||.+++.+|.++| ++|+++|++++........ .....+
T Consensus 81 ~~~~~~~-~~i~~~i~~~----~~--~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvli~~~~~~~~~~~~~~~~~ 148 (281)
T d1c4xa_ 81 SWVGMRV-EQILGLMNHF----GI--EKSHIVGNSMGGAVTLQLVVEAP-----ERFDKVALMGSVGAPMNARPPELARL 148 (281)
T ss_dssp HHHHHHH-HHHHHHHHHH----TC--SSEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCSSCCSSCCHHHHHH
T ss_pred hhHHHhh-hhcccccccc----cc--ccceecccccccccccccccccc-----ccccceEEeccccCccccchhHHHHH
Confidence 1112222 4444444433 33 38999999999999999999988 8999999999864332221 111111
Q ss_pred hcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCC--HHHHHHHhhhccCCCCHHHHHHHHHHHHh
Q 011833 306 LPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMH--PELFEKLIFSNFGNIPTKLISQLTTVFQE 383 (476)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (476)
..... .+ ........+......+.... .+......... . . .....+......
T Consensus 149 ~~~~~------~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~-~~~~~~~~~~~~ 202 (281)
T d1c4xa_ 149 LAFYA------DP----------------RLTPYRELIHSFVYDPENFPGMEEIVKSRFEVA--N-D-PEVRRIQEVMFE 202 (281)
T ss_dssp HTGGG------SC----------------CHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHH--H-C-HHHHHHHHHHHH
T ss_pred HHhhh------hc----------------ccchhhhhhhhhcccccccchhhhHHHHHhhhc--c-c-chhhhhhhhhhh
Confidence 10000 00 00000011111111111110 11111111000 0 0 000111111100
Q ss_pred CCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchh
Q 011833 384 GGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVY 463 (476)
Q Consensus 384 ~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~ 463 (476)
...............+.++++|+|+|+|++|.++|++..+++.+.+++. +++++ +++||+.+ .+.|+++.
T Consensus 203 ~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~~~ 272 (281)
T d1c4xa_ 203 SMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHA--ELVVL-----DRCGHWAQ---LERWDAMG 272 (281)
T ss_dssp HHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCSSE--EEEEE-----SSCCSCHH---HHSHHHHH
T ss_pred HHhhhhhhhccchhhhhhhccceEEEEeCCCCCcCHHHHHHHHHHCCCC--EEEEE-----CCCCCchH---HhCHHHHH
Confidence 0000001112223467889999999999999999999999999999875 67777 89999554 67899999
Q ss_pred HHHHHHHHh
Q 011833 464 PCIIEFLTR 472 (476)
Q Consensus 464 ~~i~~fL~~ 472 (476)
+.|++||+.
T Consensus 273 ~~i~~Fl~s 281 (281)
T d1c4xa_ 273 PMLMEHFRA 281 (281)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhCC
Confidence 999999973
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.94 E-value=2.5e-26 Score=222.83 Aligned_cols=277 Identities=13% Similarity=0.066 Sum_probs=165.8
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.||.+++++.+.+.. ..|+|||+||+++++..| ..++..|+++||+|+++|+||||.|.++..
T Consensus 30 ~~~g~~~~y~~~G~~~----~~p~llllHG~~~~~~~~-----~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~------- 93 (310)
T d1b6ga_ 30 GYPGLRAHYLDEGNSD----AEDVFLCLHGEPTWSYLY-----RKMIPVFAESGARVIAPDFFGFGKSDKPVD------- 93 (310)
T ss_dssp TCTTCEEEEEEEECTT----CSCEEEECCCTTCCGGGG-----TTTHHHHHHTTCEEEEECCTTSTTSCEESC-------
T ss_pred CCCCEEEEEEEecCCC----CCCEEEEECCCCCchHHH-----HHHHHHhhccCceEEEeeecCccccccccc-------
Confidence 4589999988875542 357889999999999999 688999999999999999999999975432
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
...|+++++
T Consensus 94 -----------------------------------------------------------------------~~~~~~~~~ 102 (310)
T d1b6ga_ 94 -----------------------------------------------------------------------EEDYTFEFH 102 (310)
T ss_dssp -----------------------------------------------------------------------GGGCCHHHH
T ss_pred -----------------------------------------------------------------------ccccccccc
Confidence 113566666
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh-hHH-HhhcCcc
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS-LLR-LLLPLSD 310 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~-~~~-~~~~~~~ 310 (476)
+ +|+.++++.+ +. +++++|||||||.+++.+|.++| ++|+++|++++......... ... .......
T Consensus 103 ~-~~l~~~l~~l----~~--~~~~lvGhS~Gg~ia~~~A~~~P-----~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 170 (310)
T d1b6ga_ 103 R-NFLLALIERL----DL--RNITLVVQDWGGFLGLTLPMADP-----SRFKRLIIMNACLMTDPVTQPAFSAFVTQPAD 170 (310)
T ss_dssp H-HHHHHHHHHH----TC--CSEEEEECTHHHHHHTTSGGGSG-----GGEEEEEEESCCCCCCTTTCTHHHHTTTSSTT
T ss_pred c-cchhhhhhhc----cc--cccccccceecccccccchhhhc-----cccceEEEEcCccCCCcccchhHHHHhhcchh
Confidence 6 7777777654 33 48999999999999999999998 89999999987653332111 011 1100000
Q ss_pred hhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccC
Q 011833 311 PIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRS 390 (476)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (476)
... ............. ........ ...+..+....+...............+..+..........
T Consensus 171 ~~~---------~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (310)
T d1b6ga_ 171 GFT---------AWKYDLVTPSDLR---LDQFMKRW---APTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACID 235 (310)
T ss_dssp THH---------HHHHHHHSCSSCC---HHHHHHHH---STTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHH
T ss_pred hhh---------hhhhhhccchhhh---hhhhhhcc---CccccHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhh
Confidence 000 0000000000000 00000000 00111222211111110001111112221111111000000
Q ss_pred -CcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHH
Q 011833 391 -GTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEF 469 (476)
Q Consensus 391 -g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~f 469 (476)
..........++++|+|+++|++|.+++++..+.+.+.+++. ++++++ +++|| +...+.++.+.+.|.+|
T Consensus 236 ~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i-----~~~GH---~~~~e~pe~v~~~i~~F 306 (310)
T d1b6ga_ 236 ISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGC-PEPLEI-----ADAGH---FVQEFGEQVAREALKHF 306 (310)
T ss_dssp HHHHHHHHHHHTCCSEEEEEEETTCSSSSHHHHHHHHHHSTTC-CCCEEE-----TTCCS---CGGGGHHHHHHHHHHHH
T ss_pred hhhhhhHHhhcccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCC-ccEEEE-----CCCcC---chhhhCHHHHHHHHHHH
Confidence 000001134578999999999999999999999999999874 345555 89999 34477888999999999
Q ss_pred HHh
Q 011833 470 LTR 472 (476)
Q Consensus 470 L~~ 472 (476)
|+.
T Consensus 307 l~~ 309 (310)
T d1b6ga_ 307 AET 309 (310)
T ss_dssp HHT
T ss_pred HhC
Confidence 985
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.94 E-value=2.4e-26 Score=216.49 Aligned_cols=266 Identities=15% Similarity=0.217 Sum_probs=163.4
Q ss_pred eEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCc
Q 011833 69 YVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGE 148 (476)
Q Consensus 69 ~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~ 148 (476)
+++ +.||.+|++..+.+. .+|+|||+||++++...| ..++..|+++||+|+++|+||||.|.....
T Consensus 2 ~i~-~~dG~~l~y~~~G~~-----~~~~vv~lHG~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~--- 67 (275)
T d1a88a_ 2 TVT-TSDGTNIFYKDWGPR-----DGLPVVFHHGWPLSADDW-----DNQMLFFLSHGYRVIAHDRRGHGRSDQPST--- 67 (275)
T ss_dssp EEE-CTTSCEEEEEEESCT-----TSCEEEEECCTTCCGGGG-----HHHHHHHHHTTCEEEEECCTTSTTSCCCSS---
T ss_pred EEE-ecCCCEEEEEEecCC-----CCCeEEEECCCCCCHHHH-----HHHHHHHHhCCCEEEEEecccccccccccc---
Confidence 455 799999999998653 358899999999999999 578999999999999999999999865321
Q ss_pred cccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCC
Q 011833 149 DSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWD 228 (476)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (476)
.++
T Consensus 68 -----------------------------------------------------------------------------~~~ 70 (275)
T d1a88a_ 68 -----------------------------------------------------------------------------GHD 70 (275)
T ss_dssp -----------------------------------------------------------------------------CCS
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 356
Q ss_pred chhhhhccHHHHHHHHHHHhCCCCCcEeEEEEch-HHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhc
Q 011833 229 FDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSM-GGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLP 307 (476)
Q Consensus 229 ~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~-GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~ 307 (476)
+++++ +|+.++++.+ +. +++++||||+ ||.+++.++.++| ++|++++++++...........
T Consensus 71 ~~~~~-~~~~~~l~~l----~~--~~~~~vg~s~~G~~~~~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~----- 133 (275)
T d1a88a_ 71 MDTYA-ADVAALTEAL----DL--RGAVHIGHSTGGGEVARYVARAEP-----GRVAKAVLVSAVPPVMVKSDTN----- 133 (275)
T ss_dssp HHHHH-HHHHHHHHHH----TC--CSEEEEEETHHHHHHHHHHHHSCT-----TSEEEEEEESCCCSCCBCBTTB-----
T ss_pred ccccc-cccccccccc----cc--cccccccccccccchhhcccccCc-----chhhhhhhhcccccccccchhh-----
Confidence 67766 7888887766 22 3789999997 5566677788887 8899999998653222110000
Q ss_pred CcchhhhccCCcCChHHHHHhhccCC-CC-chHHHHHHHHhh-c---CCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHH
Q 011833 308 LSDPIQALNVPVIPLGTFLAAIHPFA-SS-PPYVLSWLKFLI-S---APDMMHPELFEKLIFSNFGNIPTKLISQLTTVF 381 (476)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (476)
....+.. .+..+.... .. ..+......... . ..........+.+..... .........+...+
T Consensus 134 ---------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 202 (275)
T d1a88a_ 134 ---------PDGLPLE-VFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGM-MGAANAHYECIAAF 202 (275)
T ss_dssp ---------TTSBCHH-HHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH-HSCHHHHHHHHHHH
T ss_pred ---------hhhhhhh-hhhhhhhhhhhhhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhc-ccchHHHHHHHHHh
Confidence 0000000 000000000 00 000001100000 0 011112222222211111 11112222222222
Q ss_pred HhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHH-HHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCcc
Q 011833 382 QEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEA-VYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAY 460 (476)
Q Consensus 382 ~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~-~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~ 460 (476)
... .+.+.+.++++|+|+++|++|.++|.+. .+.+.+.+++. +++++ +++||+.+ .+.|+
T Consensus 203 ~~~---------~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~ 263 (275)
T d1a88a_ 203 SET---------DFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANA--TLKSY-----EGLPHGML---STHPE 263 (275)
T ss_dssp HHC---------CCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTE--EEEEE-----TTCCTTHH---HHCHH
T ss_pred hhh---------hhhHHHHhhccccceeecCCCCCcCHHHHHHHHHHhCCCC--EEEEE-----CCCCCchH---HhCHH
Confidence 221 2223577899999999999999998765 56666778864 77887 89999554 67899
Q ss_pred chhHHHHHHHHh
Q 011833 461 QVYPCIIEFLTR 472 (476)
Q Consensus 461 ~v~~~i~~fL~~ 472 (476)
++.+.|.+||+.
T Consensus 264 ~~~~~i~~Fl~s 275 (275)
T d1a88a_ 264 VLNPDLLAFVKS 275 (275)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHcC
Confidence 999999999973
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.94 E-value=5.4e-26 Score=216.50 Aligned_cols=262 Identities=14% Similarity=0.142 Sum_probs=156.6
Q ss_pred ceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcccccccc
Q 011833 76 DWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSA 155 (476)
Q Consensus 76 G~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~ 155 (476)
+++|++... +.+|+|||+||++.++..|. +.......+.++||+|+++|+||||.|.+....
T Consensus 19 ~~~i~y~~~-------G~G~~ivllHG~~~~~~~~~--~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~--------- 80 (283)
T d2rhwa1 19 DFNIHYNEA-------GNGETVIMLHGGGPGAGGWS--NYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMD--------- 80 (283)
T ss_dssp EEEEEEEEE-------CCSSEEEEECCCSTTCCHHH--HHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCS---------
T ss_pred CEEEEEEEE-------cCCCeEEEECCCCCChhHHH--HHHHHHHHHHHCCCEEEEEeCCCCccccccccc---------
Confidence 456766554 23589999999999988873 001223445678999999999999999664320
Q ss_pred ccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhc
Q 011833 156 NAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEE 235 (476)
Q Consensus 156 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (476)
.++...++ +
T Consensus 81 ----------------------------------------------------------------------~~~~~~~~-~ 89 (283)
T d2rhwa1 81 ----------------------------------------------------------------------EQRGLVNA-R 89 (283)
T ss_dssp ----------------------------------------------------------------------SCHHHHHH-H
T ss_pred ----------------------------------------------------------------------ccccchhh-h
Confidence 11222222 5
Q ss_pred cHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh--hHHHhhcCcchhh
Q 011833 236 DVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS--LLRLLLPLSDPIQ 313 (476)
Q Consensus 236 Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~--~~~~~~~~~~~~~ 313 (476)
|+.++++.+ +. +++++|||||||.+++.++.++| .+|+++|++++......... .....
T Consensus 90 ~i~~li~~l----~~--~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lil~~~~~~~~~~~~~~~~~~~-------- 150 (283)
T d2rhwa1 90 AVKGLMDAL----DI--DRAHLVGNAMGGATALNFALEYP-----DRIGKLILMGPGGLGPSMFAPMPMEGI-------- 150 (283)
T ss_dssp HHHHHHHHH----TC--CCEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCSCCCCCSSSCSSCHHH--------
T ss_pred hcccccccc----cc--cccccccccchHHHHHHHHHHhh-----hhcceEEEeCCCcCCcchhhhhhHHHH--------
Confidence 666666544 33 38999999999999999999988 89999999997542221100 00000
Q ss_pred hccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcc
Q 011833 314 ALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTF 393 (476)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 393 (476)
..+....... ........+...........++......... .. .......+.......... ..
T Consensus 151 ---------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~----~~ 213 (283)
T d2rhwa1 151 ---------KLLFKLYAEP--SYETLKQMLQVFLYDQSLITEELLQGRWEAI-QR-QPEHLKNFLISAQKAPLS----TW 213 (283)
T ss_dssp ---------HHHHHHHHSC--CHHHHHHHHHHHCSCGGGCCHHHHHHHHHHH-HH-CHHHHHHHHHHHHHSCGG----GG
T ss_pred ---------HHHHHHhhhh--hhhhHHHHHHHhhcccccCcHHHHHHHHHHh-hh-hhhhhhhhhhhhhhhhcc----cc
Confidence 0000000000 0001111111222222222333332221110 00 111111111111111111 12
Q ss_pred cccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 394 FYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 394 ~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
+....+.++++|+++++|++|.++|++.++++.+.+++. +++++ +++||+.+ .+.|+++.+.|.+||++
T Consensus 214 ~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 214 DVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDA--RLHVF-----SKCGHWAQ---WEHADEFNRLVIDFLRH 282 (283)
T ss_dssp CCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSSSE--EEEEE-----SSCCSCHH---HHTHHHHHHHHHHHHHH
T ss_pred chHHHHhhCCCCEEEEEeCCCCCcCHHHHHHHHHhCCCC--EEEEE-----CCCCCchH---HhCHHHHHHHHHHHHhC
Confidence 234568889999999999999999999999999999865 67777 89999544 67899999999999975
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.94 E-value=7.5e-26 Score=213.25 Aligned_cols=258 Identities=17% Similarity=0.204 Sum_probs=153.1
Q ss_pred CceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccc
Q 011833 75 SDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITS 154 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~ 154 (476)
++..|++..+ +.+|||||+||+++++..| ..++..|.++||+|+++|+||||.|++...
T Consensus 11 ~~v~i~y~~~-------G~G~~ivllHG~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~--------- 69 (277)
T d1brta_ 11 TSIDLYYEDH-------GTGQPVVLIHGFPLSGHSW-----ERQSAALLDAGYRVITYDRRGFGQSSQPTT--------- 69 (277)
T ss_dssp EEEEEEEEEE-------CSSSEEEEECCTTCCGGGG-----HHHHHHHHHTTCEEEEECCTTSTTSCCCSS---------
T ss_pred CcEEEEEEEE-------ccCCeEEEECCCCCCHHHH-----HHHHHHHHhCCCEEEEEeCCCCCccccccc---------
Confidence 3455555544 2368899999999999999 588999999999999999999999965321
Q ss_pred cccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhh
Q 011833 155 ANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLE 234 (476)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (476)
.+++++++
T Consensus 70 -----------------------------------------------------------------------~~~~~~~~- 77 (277)
T d1brta_ 70 -----------------------------------------------------------------------GYDYDTFA- 77 (277)
T ss_dssp -----------------------------------------------------------------------CCSHHHHH-
T ss_pred -----------------------------------------------------------------------ccchhhhh-
Confidence 36677776
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHH-HHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhh
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGG-ILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQ 313 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG-~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~ 313 (476)
+|+.++++.+ +. +++++||||||| .++..++..+| .+|+++|++++...........
T Consensus 78 ~dl~~~l~~l----~~--~~~~lvGhS~G~~~~~~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~----------- 135 (277)
T d1brta_ 78 ADLNTVLETL----DL--QDAVLVGFSTGTGEVARYVSSYGT-----ARIAKVAFLASLEPFLLKTDDN----------- 135 (277)
T ss_dssp HHHHHHHHHH----TC--CSEEEEEEGGGHHHHHHHHHHHCS-----TTEEEEEEESCCCSCCBCBTTB-----------
T ss_pred hhhhhhhhcc----Cc--ccccccccccchhhhhHHHHHhhh-----cccceEEEecCCCcccccchhh-----------
Confidence 7887777765 33 389999999996 55556676766 8899999998754322110000
Q ss_pred hccCCcCChHHHHHhhccCCC-Cc-hHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHH-HHHhCCcc---
Q 011833 314 ALNVPVIPLGTFLAAIHPFAS-SP-PYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTT-VFQEGGLC--- 387 (476)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--- 387 (476)
.....+. .....+..... .. .+............. ................ ......+.
T Consensus 136 --~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (277)
T d1brta_ 136 --PDGAAPQ-EFFDGIVAAVKADRYAFYTGFFNDFYNLDE------------NLGTRISEEAVRNSWNTAASGGFFAAAA 200 (277)
T ss_dssp --TTCSBCH-HHHHHHHHHHHHCHHHHHHHHHHHHTTHHH------------HBTTTBCHHHHHHHHHHHHHSCHHHHHH
T ss_pred --hhhhhhh-hHHHHHHHhhhccchhhhhhccccccccch------------hhhhhhhHHHhhhhhcccchhhhhhhhh
Confidence 0000000 00000000000 00 000011111000000 0000111111111111 11111000
Q ss_pred -ccCCcccccccCCCCcccEEEEeeCCCCcCCHHHH-HHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHH
Q 011833 388 -DRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAV-YETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPC 465 (476)
Q Consensus 388 -~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~-~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~ 465 (476)
......++...+.++++|+++++|++|.+++++.. +.+.+.+++. +++++ +++||+.+ .+.|+++.+.
T Consensus 201 ~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~~~~~ 270 (277)
T d1brta_ 201 APTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSA--EYVEV-----EGAPHGLL---WTHAEEVNTA 270 (277)
T ss_dssp GGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCTTS--EEEEE-----TTCCTTHH---HHTHHHHHHH
T ss_pred hhhhhhhhHHHHHHhcCccceeEeecCCCCcCHHHHHHHHHHhCCCC--EEEEE-----CCCCCchH---HhCHHHHHHH
Confidence 00011233456888999999999999999998764 5566778875 67777 89999544 6789999999
Q ss_pred HHHHHHh
Q 011833 466 IIEFLTR 472 (476)
Q Consensus 466 i~~fL~~ 472 (476)
|.+||++
T Consensus 271 i~~fL~k 277 (277)
T d1brta_ 271 LLAFLAK 277 (277)
T ss_dssp HHHHHHC
T ss_pred HHHHHCc
Confidence 9999985
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.93 E-value=3.9e-26 Score=214.77 Aligned_cols=260 Identities=16% Similarity=0.203 Sum_probs=156.1
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.||.++++..+. .+|||||+||++++...| ..++..|.++||+|+++|+||||.|+....
T Consensus 5 ~~dG~~i~y~~~G-------~g~pvvllHG~~~~~~~~-----~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~------- 65 (273)
T d1a8sa_ 5 TRDGTQIYYKDWG-------SGQPIVFSHGWPLNADSW-----ESQMIFLAAQGYRVIAHDRRGHGRSSQPWS------- 65 (273)
T ss_dssp CTTSCEEEEEEES-------CSSEEEEECCTTCCGGGG-----HHHHHHHHHTTCEEEEECCTTSTTSCCCSS-------
T ss_pred eeCCcEEEEEEEC-------CCCeEEEECCCCCCHHHH-----HHHHHHHHhCCCEEEEEechhcCccccccc-------
Confidence 6799999888762 358899999999999999 588999999999999999999999975332
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.++++++
T Consensus 66 -------------------------------------------------------------------------~~~~~~~ 72 (273)
T d1a8sa_ 66 -------------------------------------------------------------------------GNDMDTY 72 (273)
T ss_dssp -------------------------------------------------------------------------CCSHHHH
T ss_pred -------------------------------------------------------------------------cccccch
Confidence 2555666
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHh-cCCCCCCcccccEEEEecccccccCChhhHHHhhcCcch
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLS-HCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDP 311 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~-~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~ 311 (476)
+ +|+.++++.+ +. ++.++||||+||.++..+++ ++| .+|++++++++............
T Consensus 73 ~-~~~~~~l~~l----~~--~~~~lvg~s~gG~~~~~~~a~~~p-----~~v~~~~l~~~~~~~~~~~~~~~-------- 132 (273)
T d1a8sa_ 73 A-DDLAQLIEHL----DL--RDAVLFGFSTGGGEVARYIGRHGT-----ARVAKAGLISAVPPLMLKTEANP-------- 132 (273)
T ss_dssp H-HHHHHHHHHT----TC--CSEEEEEETHHHHHHHHHHHHHCS-----TTEEEEEEESCCCSCCBCCSSCT--------
T ss_pred H-HHHHHHHHhc----Cc--cceeeeeeccCCccchhhhhhhhh-----hccceeEEEeccccccccccccc--------
Confidence 6 6777776654 33 37899999998876666554 445 78999999987543221100000
Q ss_pred hhhccCCcCChHHHHHhhc-cCCC-CchHHHHHHHHhh-c--CCC-CCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC
Q 011833 312 IQALNVPVIPLGTFLAAIH-PFAS-SPPYVLSWLKFLI-S--APD-MMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG 385 (476)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~-~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (476)
.... ...+..+. .... ............. . ... .......+.+..... .............+..
T Consensus 133 ------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-- 202 (273)
T d1a8sa_ 133 ------GGLP-MEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGM-AAGHKNAYDCIKAFSE-- 202 (273)
T ss_dssp ------TSBC-HHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHH-HSCHHHHHHHHHHHHH--
T ss_pred ------ccch-hhhhhhHHHHHHHHHHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhc-ccchhhhhhhHHHhhh--
Confidence 0000 00000000 0000 0000000000000 0 000 111222222111110 1111111111111211
Q ss_pred ccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhc-CCCceeEEEecCCCCCCCcccccccccCCccchhH
Q 011833 386 LCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLI-PEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 386 ~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
..+.+.++++++|+|+|+|++|.++|.+....+.+.+ ++. +++++ |++||+.+ .+.|+++++
T Consensus 203 -------~~~~~~~~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~~~~ 265 (273)
T d1a8sa_ 203 -------TDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGS--TLKIY-----SGAPHGLT---DTHKDQLNA 265 (273)
T ss_dssp -------CCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTC--EEEEE-----TTCCSCHH---HHTHHHHHH
T ss_pred -------hhhhHHHHhhccceEEEecCCCCCCCHHHHHHHHHHhCCCC--EEEEE-----CCCCCchH---HhCHHHHHH
Confidence 2223467789999999999999999998877776554 554 67777 89999554 678999999
Q ss_pred HHHHHHH
Q 011833 465 CIIEFLT 471 (476)
Q Consensus 465 ~i~~fL~ 471 (476)
.|++||+
T Consensus 266 ~i~~Fl~ 272 (273)
T d1a8sa_ 266 DLLAFIK 272 (273)
T ss_dssp HHHHHHH
T ss_pred HHHHHcC
Confidence 9999997
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.93 E-value=6e-25 Score=208.67 Aligned_cols=279 Identities=13% Similarity=0.081 Sum_probs=160.6
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
+.+++.+ +|.+|++.... .+|+|||+||+++++..| ..++..|++ +|+|+++|+||||.|+....
T Consensus 9 ~~~~~~~--~~~~l~y~~~G-------~gp~vv~lHG~~~~~~~~-----~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~ 73 (293)
T d1ehya_ 9 KHYEVQL--PDVKIHYVREG-------AGPTLLLLHGWPGFWWEW-----SKVIGPLAE-HYDVIVPDLRGFGDSEKPDL 73 (293)
T ss_dssp CEEEEEC--SSCEEEEEEEE-------CSSEEEEECCSSCCGGGG-----HHHHHHHHT-TSEEEEECCTTSTTSCCCCT
T ss_pred cceEEEE--CCEEEEEEEEC-------CCCeEEEECCCCCCHHHH-----HHHHHHHhc-CCEEEEecCCcccCCccccc
Confidence 3455654 89999887752 368999999999999999 578888865 89999999999999965332
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
.. ..
T Consensus 74 ~~----------------------------------------------------------------------------~~ 77 (293)
T d1ehya_ 74 ND----------------------------------------------------------------------------LS 77 (293)
T ss_dssp TC----------------------------------------------------------------------------GG
T ss_pred cc----------------------------------------------------------------------------cc
Confidence 00 01
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh-hHHH
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS-LLRL 304 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~-~~~~ 304 (476)
.+++++++ +|+.++++ ..+. +++++|||||||.+++.++.++| +++.+++++++......... ....
T Consensus 78 ~~~~~~~a-~~~~~~~~----~l~~--~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~ 145 (293)
T d1ehya_ 78 KYSLDKAA-DDQAALLD----ALGI--EKAYVVGHDFAAIVLHKFIRKYS-----DRVIKAAIFDPIQPDFGPVYFGLGH 145 (293)
T ss_dssp GGCHHHHH-HHHHHHHH----HTTC--CCEEEEEETHHHHHHHHHHHHTG-----GGEEEEEEECCSCTTC---------
T ss_pred cccchhhh-hHHHhhhh----hcCc--cccccccccccccchhcccccCc-----cccceeeeeeccCccccchhhhhhh
Confidence 23444444 55555544 3444 38999999999999999999998 89999999997543211100 0000
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHH----HHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHH
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSW----LKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTV 380 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (476)
.. ....... .. ......... ........+ +............+.+..+...............+...
T Consensus 146 ~~--~~~~~~~--~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (293)
T d1ehya_ 146 VH--ESWYSQF--HQ--LDMAVEVVG---SSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRA 216 (293)
T ss_dssp ----CCHHHHH--TT--CHHHHHHHT---SCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHH
T ss_pred hh--hhhhhhh--hc--cchhhhhhc---cchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccchhhhhhhhhhhh
Confidence 00 0000000 00 000000000 011111111 11111223334444444443332211111111111111
Q ss_pred HHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHH-HhcCCCceeEEEecCCCCCCCcccccccccCCc
Q 011833 381 FQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETV-KLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAA 459 (476)
Q Consensus 381 ~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~ 459 (476)
....... ........++++|+++|+|++|.++|.+...+.. +.+++ .+++++ +++||+.+ .|.|
T Consensus 217 ~~~~~~~-----~~~~~~~~~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i-----~~~gH~~~---~e~P 281 (293)
T d1ehya_ 217 NIRPDAA-----LWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSN--YTMETI-----EDCGHFLM---VEKP 281 (293)
T ss_dssp HSSSSCC-----CCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBSS--EEEEEE-----TTCCSCHH---HHCH
T ss_pred ccccchh-----hhhhhhhhccCCceEEEEeCCCCCcCHHHHHHHHHHhCCC--CEEEEE-----CCCCCchH---HHCH
Confidence 1111110 0001134568899999999999999988776544 45564 477777 89999544 7889
Q ss_pred cchhHHHHHHHH
Q 011833 460 YQVYPCIIEFLT 471 (476)
Q Consensus 460 ~~v~~~i~~fL~ 471 (476)
+++.+.|.+||+
T Consensus 282 e~~~~~I~~Ffr 293 (293)
T d1ehya_ 282 EIAIDRIKTAFR 293 (293)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHhhC
Confidence 999999999974
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.93 E-value=5.7e-26 Score=208.70 Aligned_cols=253 Identities=15% Similarity=0.206 Sum_probs=150.5
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhh
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKS 173 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (476)
+++|||+||+++++..| ..+++.|+++||+|+++|+||||.|++...
T Consensus 2 G~~vvllHG~~~~~~~w-----~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~---------------------------- 48 (258)
T d1xkla_ 2 GKHFVLVHGACHGGWSW-----YKLKPLLEAAGHKVTALDLAASGTDLRKIE---------------------------- 48 (258)
T ss_dssp CCEEEEECCTTCCGGGG-----TTHHHHHHHTTCEEEECCCTTSTTCCCCGG----------------------------
T ss_pred CCcEEEECCCCCCHHHH-----HHHHHHHHhCCCEEEEecCCCCCCCCCCCC----------------------------
Confidence 57899999999999999 699999999999999999999999976432
Q ss_pred hHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCC
Q 011833 174 QLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDG 253 (476)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ 253 (476)
..++++++. .|+..++ ..... ..
T Consensus 49 ---------------------------------------------------~~~~~~~~~-~~~~~~~---~~~~~--~~ 71 (258)
T d1xkla_ 49 ---------------------------------------------------ELRTLYDYT-LPLMELM---ESLSA--DE 71 (258)
T ss_dssp ---------------------------------------------------GCCSHHHHH-HHHHHHH---HTSCS--SS
T ss_pred ---------------------------------------------------CCcchHHHH-HHHhhhh---hcccc--cc
Confidence 023444444 3333333 23222 24
Q ss_pred cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh--hHHHhhcCcchhhhccCCcCChHHHHHhhcc
Q 011833 254 KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS--LLRLLLPLSDPIQALNVPVIPLGTFLAAIHP 331 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (476)
+++++||||||.+++.++.++| .+++++|++++......... .................... .
T Consensus 72 ~~~lvghS~Gg~va~~~a~~~p-----~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 136 (258)
T d1xkla_ 72 KVILVGHSLGGMNLGLAMEKYP-----QKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFL----------P 136 (258)
T ss_dssp CEEEEEETTHHHHHHHHHHHCG-----GGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEE----------E
T ss_pred cccccccchhHHHHHHHhhhhc-----cccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhhh----------h
Confidence 8999999999999999999998 89999999987643322211 11111100000000000000 0
Q ss_pred CCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC--ccccCCcccccccCCCCcccEEEE
Q 011833 332 FASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG--LCDRSGTFFYKDHIGKTNVPVLAL 409 (476)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~l~~i~vPvLii 409 (476)
...... ........++........ ....... .+........ .............+..+++|+++|
T Consensus 137 ~~~~~~---------~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 203 (258)
T d1xkla_ 137 YGSPEE---------PLTSMFFGPKFLAHKLYQ---LCSPEDL-ALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYI 203 (258)
T ss_dssp CSCTTS---------CCEEEECCHHHHHHHTST---TSCHHHH-HHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEE
T ss_pred hhhhhh---------hcccccccHHHHHHHhhh---cccHHHH-HHhhhhhhhhhhhhhhhhhhhhcccccccccceeEe
Confidence 000000 000000111111111100 0000000 0000000000 000000112223567789999999
Q ss_pred eeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 410 AADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 410 ~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
+|++|.++|++..+.+.+.+++. +++++ +++||+.+ .+.|+++.+.|++|+++++
T Consensus 204 ~g~~D~~~~~~~~~~~~~~~~~~--~~~~i-----~~~gH~~~---~e~P~~~~~~l~e~~~k~~ 258 (258)
T d1xkla_ 204 VCTEDKGIPEEFQRWQIDNIGVT--EAIEI-----KGADHMAM---LCEPQKLCASLLEIAHKYN 258 (258)
T ss_dssp EETTCTTTTHHHHHHHHHHHCCS--EEEEE-----TTCCSCHH---HHSHHHHHHHHHHHHHHCC
T ss_pred eecCCCCCCHHHHHHHHHHCCCC--EEEEE-----CCCCCchH---HhCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999875 67777 89999654 6889999999999999874
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.93 E-value=1.7e-25 Score=209.23 Aligned_cols=262 Identities=19% Similarity=0.254 Sum_probs=156.2
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.||.+|++..+. .+|||||+||++++...| ..+++.|+++||+|+++|+||||.|+....
T Consensus 5 ~~dG~~l~y~~~G-------~g~~vv~lHG~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~------- 65 (271)
T d1va4a_ 5 AKDGTQIYFKDWG-------SGKPVLFSHGWLLDADMW-----EYQMEYLSSRGYRTIAFDRRGFGRSDQPWT------- 65 (271)
T ss_dssp CTTSCEEEEEEES-------SSSEEEEECCTTCCGGGG-----HHHHHHHHTTTCEEEEECCTTSTTSCCCSS-------
T ss_pred eECCeEEEEEEEc-------CCCeEEEECCCCCCHHHH-----HHHHHHHHhCCCEEEEEecccccccccccc-------
Confidence 4699999887762 357899999999999999 588999999999999999999999965321
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.++++++
T Consensus 66 -------------------------------------------------------------------------~~~~~~~ 72 (271)
T d1va4a_ 66 -------------------------------------------------------------------------GNDYDTF 72 (271)
T ss_dssp -------------------------------------------------------------------------CCSHHHH
T ss_pred -------------------------------------------------------------------------ccccccc
Confidence 2455555
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHH-HhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcch
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAM-LSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDP 311 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~-a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~ 311 (476)
+ +|+.++++.+ +. +++++||||+||.+++.+ +.++| ++|++++++++.............
T Consensus 73 ~-~~~~~~~~~~----~~--~~~~~vg~s~gG~~~~~~~a~~~p-----~~v~~~v~~~~~~~~~~~~~~~~~------- 133 (271)
T d1va4a_ 73 A-DDIAQLIEHL----DL--KEVTLVGFSMGGGDVARYIARHGS-----ARVAGLVLLGAVTPLFGQKPDYPQ------- 133 (271)
T ss_dssp H-HHHHHHHHHH----TC--CSEEEEEETTHHHHHHHHHHHHCS-----TTEEEEEEESCCCSCCBCBTTBTT-------
T ss_pred c-ccceeeeeec----CC--Ccceeecccccccccccccccccc-----ceeeEEEeecccccccccchhhhh-------
Confidence 5 6666666554 33 389999999999766554 55555 889999999875433221100000
Q ss_pred hhhccCCcCChHHHHHhhccCCCC-chHHHHHHHHhhc--CCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccc
Q 011833 312 IQALNVPVIPLGTFLAAIHPFASS-PPYVLSWLKFLIS--APDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCD 388 (476)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (476)
.+....+.......... ..++..+...... .................. .............+..
T Consensus 134 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----- 200 (271)
T d1va4a_ 134 -------GVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIAL-LASLKATVDCVTAFAE----- 200 (271)
T ss_dssp -------SBCHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHH-HSCHHHHHHHHHHHHH-----
T ss_pred -------hhhhhHHHHHHHHhhhhhhhhhhhhcchhhcccchhhhhhhHHHHHHhhhh-hhhhhhhhhcccccch-----
Confidence 00000000000000000 0001111111111 111111211111111110 1111111111111111
Q ss_pred cCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHH-hcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHH
Q 011833 389 RSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVK-LIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCII 467 (476)
Q Consensus 389 ~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~ 467 (476)
..+...+.++++|+++++|++|.++|++.+.++.+ .+++. +++++ +++||+.+ .+.|+++.+.|.
T Consensus 201 ----~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~gH~~~---~e~p~~~~~~i~ 266 (271)
T d1va4a_ 201 ----TDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGA--ELKVY-----KDAPHGFA---VTHAQQLNEDLL 266 (271)
T ss_dssp ----CCCHHHHHHCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTC--EEEEE-----TTCCTTHH---HHTHHHHHHHHH
T ss_pred ----hhhhhhhhhcccceeecccCCCCCCCHHHHHHHHHHhCCCC--EEEEE-----CCCCCchH---HhCHHHHHHHHH
Confidence 11223577899999999999999999988877754 55654 67777 89999554 577899999999
Q ss_pred HHHHh
Q 011833 468 EFLTR 472 (476)
Q Consensus 468 ~fL~~ 472 (476)
+||++
T Consensus 267 ~fL~k 271 (271)
T d1va4a_ 267 AFLKR 271 (271)
T ss_dssp HHHTC
T ss_pred HHHCc
Confidence 99985
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.93 E-value=5.3e-26 Score=210.06 Aligned_cols=247 Identities=13% Similarity=0.098 Sum_probs=148.9
Q ss_pred EEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhhhHH
Q 011833 97 LLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLM 176 (476)
Q Consensus 97 VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 176 (476)
+||+||++.++..| ..++..|+++||+|+++|+||||.|++...
T Consensus 5 ~vliHG~~~~~~~w-----~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~------------------------------- 48 (256)
T d3c70a1 5 FVLIHTICHGAWIW-----HKLKPLLEALGHKVTALDLAASGVDPRQIE------------------------------- 48 (256)
T ss_dssp EEEECCTTCCGGGG-----TTHHHHHHHTTCEEEEECCTTSTTCSCCGG-------------------------------
T ss_pred EEEeCCCCCCHHHH-----HHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-------------------------------
Confidence 68999999999999 699999999999999999999999976432
Q ss_pred HHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEe
Q 011833 177 ETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLL 256 (476)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~ 256 (476)
..+++++++ +|+.++++. ... .++++
T Consensus 49 ------------------------------------------------~~~~~~~~~-~~l~~~~~~---~~~--~~~~~ 74 (256)
T d3c70a1 49 ------------------------------------------------EIGSFDEYS-EPLLTFLEA---LPP--GEKVI 74 (256)
T ss_dssp ------------------------------------------------GCCSHHHHT-HHHHHHHHH---SCT--TCCEE
T ss_pred ------------------------------------------------CCCCHHHHH-HHhhhhhhh---hcc--cccee
Confidence 125556665 566555443 222 24899
Q ss_pred EEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChh-h-HHH-hhcCcchhhhccCCcCChHHHHHhhccCC
Q 011833 257 AVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS-L-LRL-LLPLSDPIQALNVPVIPLGTFLAAIHPFA 333 (476)
Q Consensus 257 lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (476)
+|||||||.+++.++..+| .+|+++|++++......... . ... ................ .
T Consensus 75 lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-- 137 (256)
T d3c70a1 75 LVGESCGGLNIAIAADKYC-----EKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYT----------K-- 137 (256)
T ss_dssp EEEETTHHHHHHHHHHHHG-----GGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEE----------E--
T ss_pred ecccchHHHHHHHHhhcCc-----hhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhh----------c--
Confidence 9999999999999999988 89999999987543322111 0 000 0000000000000000 0
Q ss_pred CCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhC--CccccCCcccccccCCCCcccEEEEee
Q 011833 334 SSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEG--GLCDRSGTFFYKDHIGKTNVPVLALAA 411 (476)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~l~~i~vPvLii~G 411 (476)
.... ........+....... ................. .................+++|+++|+|
T Consensus 138 ~~~~----------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G 203 (256)
T d3c70a1 138 DGKE----------ITGLKLGFTLLRENLY----TLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWT 203 (256)
T ss_dssp TTEE----------EEEEECCHHHHHHHTS----TTSCHHHHHHHHHHCCCBCCCHHHHTTSCCCCTTTGGGSCEEEEEC
T ss_pred cccc----------cchhhhhhhhhhhhhh----hhcchhhHHHhhhhhhhhhHHHhhhhhcchhhhhhccccceeEEee
Confidence 0000 0000011111111100 00000000000110000 000000011112245567899999999
Q ss_pred CCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 412 DQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 412 ~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
++|.++|++..+++.+.+++. +++++ +++||+.+ .+.|+++.+.|.+|+++++
T Consensus 204 ~~D~~~~~~~~~~~~~~~p~~--~~~~i-----~~agH~~~---~e~P~~~~~~l~~~~~~~~ 256 (256)
T d3c70a1 204 DQDEIFLPEFQLWQIENYKPD--KVYKV-----EGGDHKLQ---LTKTKEIAEILQEVADTYN 256 (256)
T ss_dssp TTCSSSCHHHHHHHHHHSCCS--EEEEC-----CSCCSCHH---HHSHHHHHHHHHHHHHHCC
T ss_pred cCCCCCCHHHHHHHHHHCCCC--EEEEE-----CCCCCchH---HhCHHHHHHHHHHHHHhcC
Confidence 999999999999999999875 67776 89999655 6889999999999999874
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.93 E-value=7.2e-26 Score=213.98 Aligned_cols=263 Identities=17% Similarity=0.169 Sum_probs=151.5
Q ss_pred ceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcccccccc
Q 011833 76 DWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSA 155 (476)
Q Consensus 76 G~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~ 155 (476)
+++|++..+ +.+|||||+||++.++..| ..++..|.++||+|+++|+||||.|++...
T Consensus 12 ~v~i~y~~~-------G~g~~illlHG~~~~~~~~-----~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~---------- 69 (279)
T d1hkha_ 12 PIELYYEDQ-------GSGQPVVLIHGYPLDGHSW-----ERQTRELLAQGYRVITYDRRGFGGSSKVNT---------- 69 (279)
T ss_dssp EEEEEEEEE-------SSSEEEEEECCTTCCGGGG-----HHHHHHHHHTTEEEEEECCTTSTTSCCCSS----------
T ss_pred eEEEEEEEE-------ccCCeEEEECCCCCCHHHH-----HHHHHHHHHCCCEEEEEechhhCCcccccc----------
Confidence 346666554 2358999999999999999 578888988999999999999999965321
Q ss_pred ccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhc
Q 011833 156 NAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEE 235 (476)
Q Consensus 156 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (476)
.+++++++ +
T Consensus 70 ----------------------------------------------------------------------~~~~~~~~-~ 78 (279)
T d1hkha_ 70 ----------------------------------------------------------------------GYDYDTFA-A 78 (279)
T ss_dssp ----------------------------------------------------------------------CCSHHHHH-H
T ss_pred ----------------------------------------------------------------------ccchhhhh-h
Confidence 36677776 7
Q ss_pred cHHHHHHHHHHHhCCCCCcEeEEEEchHH-HHHHHHHhcCCCCCCcccccEEEEecccccccCChhh-HHHhhcCcchhh
Q 011833 236 DVPAVMEYIRTLSKPKDGKLLAVGHSMGG-ILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSL-LRLLLPLSDPIQ 313 (476)
Q Consensus 236 Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG-~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~-~~~~~~~~~~~~ 313 (476)
|+.++++.+ +. +++++||||||| .++..++..+| ++|+++++++++......... ...+. ..
T Consensus 79 di~~~i~~l----~~--~~~~lvGhS~Gg~~~a~~~a~~~p-----~~v~~lvli~~~~~~~~~~~~~~~~~~-----~~ 142 (279)
T d1hkha_ 79 DLHTVLETL----DL--RDVVLVGFSMGTGELARYVARYGH-----ERVAKLAFLASLEPFLVQRDDNPEGVP-----QE 142 (279)
T ss_dssp HHHHHHHHH----TC--CSEEEEEETHHHHHHHHHHHHHCS-----TTEEEEEEESCCCSBCBCBTTBTTSBC-----HH
T ss_pred hhhhhhhhc----Cc--Cccccccccccccchhhhhccccc-----cccceeEEeeccCCccccchhhhhhhh-----HH
Confidence 888887765 33 389999999996 55555666666 889999999875433221100 00000 00
Q ss_pred hccCCcCChHHHHHhhccCCC--CchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCC
Q 011833 314 ALNVPVIPLGTFLAAIHPFAS--SPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSG 391 (476)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 391 (476)
. ...+......... ...+...+.....................................+. .+
T Consensus 143 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--- 207 (279)
T d1hkha_ 143 V-------FDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWI-----ED--- 207 (279)
T ss_dssp H-------HHHHHHHHHHCHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHT-----CB---
T ss_pred H-------HHHHHHhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhh-----cc---
Confidence 0 0000000000000 00000000000000111112221111111111111111110000000 00
Q ss_pred cccccccCCCCcccEEEEeeCCCCcCCHH-HHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHH
Q 011833 392 TFFYKDHIGKTNVPVLALAADQDLICPTE-AVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFL 470 (476)
Q Consensus 392 ~~~~~~~l~~i~vPvLii~G~~D~~vp~~-~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL 470 (476)
.....+.+.++++|+|+++|++|.++|.+ ..+.+.+.+++. +++++ +++||+.+ .+.|+++.+.|.+||
T Consensus 208 ~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~p~~--~~~~i-----~~~gH~~~---~e~p~~v~~~i~~fl 277 (279)
T d1hkha_ 208 FRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEA--DYVEV-----EGAPHGLL---WTHADEVNAALKTFL 277 (279)
T ss_dssp CHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCTTS--EEEEE-----TTCCTTHH---HHTHHHHHHHHHHHH
T ss_pred cccchhhhcccCCceEEEEcCCCCccCHHHHHHHHHHhCCCC--EEEEE-----CCCCCchH---HhCHHHHHHHHHHHH
Confidence 00011245668899999999999999875 467788888875 67777 89999544 678999999999999
Q ss_pred Hh
Q 011833 471 TR 472 (476)
Q Consensus 471 ~~ 472 (476)
++
T Consensus 278 ~k 279 (279)
T d1hkha_ 278 AK 279 (279)
T ss_dssp HC
T ss_pred Cc
Confidence 85
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=5e-26 Score=213.02 Aligned_cols=199 Identities=18% Similarity=0.236 Sum_probs=145.7
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccC
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
.+|.+ +|..+++..+.|... ..+++|||+||++.++..|.. ...++.|+++||+|+++|+||||.|++.....
T Consensus 9 ~~i~v--~G~~i~y~~~~~~~~--~~~~~vvllHG~~~~~~~w~~---~~~~~~la~~gy~via~D~~G~G~S~~~~~~~ 81 (208)
T d1imja_ 9 GTIQV--QGQALFFREALPGSG--QARFSVLLLHGIRFSSETWQN---LGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPA 81 (208)
T ss_dssp CCEEE--TTEEECEEEEECSSS--CCSCEEEECCCTTCCHHHHHH---HTHHHHHHHTTCEEEEECCTTSGGGTTSCCSS
T ss_pred EEEEE--CCEEEEEEEecCCCC--CCCCeEEEECCCCCChhHHhh---hHHHHHHHHcCCeEEEeecccccCCCCCCccc
Confidence 35655 999999988877543 357899999999999988830 12468899999999999999999997643210
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
.+
T Consensus 82 ------------------------------------------------------------------------------~~ 83 (208)
T d1imja_ 82 ------------------------------------------------------------------------------PI 83 (208)
T ss_dssp ------------------------------------------------------------------------------CT
T ss_pred ------------------------------------------------------------------------------cc
Confidence 11
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLP 307 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~ 307 (476)
+...+. +++.++++. .+. ++++++||||||.+++.++.++| .+++++|+++|...-.
T Consensus 84 ~~~~~~-~~l~~~~~~----l~~--~~~~lvG~S~Gg~~a~~~a~~~p-----~~v~~lV~~~p~~~~~----------- 140 (208)
T d1imja_ 84 GELAPG-SFLAAVVDA----LEL--GPPVVISPSLSGMYSLPFLTAPG-----SQLPGFVPVAPICTDK----------- 140 (208)
T ss_dssp TSCCCT-HHHHHHHHH----HTC--CSCEEEEEGGGHHHHHHHHTSTT-----CCCSEEEEESCSCGGG-----------
T ss_pred chhhhh-hhhhhcccc----ccc--ccccccccCcHHHHHHHHHHHhh-----hhcceeeecCcccccc-----------
Confidence 112222 344444443 333 38999999999999999999988 8899999988742100
Q ss_pred CcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCcc
Q 011833 308 LSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLC 387 (476)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (476)
...
T Consensus 141 ---------------------------------------------~~~-------------------------------- 143 (208)
T d1imja_ 141 ---------------------------------------------INA-------------------------------- 143 (208)
T ss_dssp ---------------------------------------------SCH--------------------------------
T ss_pred ---------------------------------------------ccc--------------------------------
Confidence 000
Q ss_pred ccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHH
Q 011833 388 DRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCII 467 (476)
Q Consensus 388 ~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~ 467 (476)
+.+.++++|+|+|+|++|.++|.+ .+..+.+++. ++.++ +++||..+ .+.|+++.+.++
T Consensus 144 ---------~~~~~i~~P~Lii~G~~D~~~~~~--~~~~~~~~~~--~~~~i-----~~~gH~~~---~~~p~~~~~~l~ 202 (208)
T d1imja_ 144 ---------ANYASVKTPALIVYGDQDPMGQTS--FEHLKQLPNH--RVLIM-----KGAGHPCY---LDKPEEWHTGLL 202 (208)
T ss_dssp ---------HHHHTCCSCEEEEEETTCHHHHHH--HHHHTTSSSE--EEEEE-----TTCCTTHH---HHCHHHHHHHHH
T ss_pred ---------ccccccccccccccCCcCcCCcHH--HHHHHhCCCC--eEEEE-----CCCCCchh---hhCHHHHHHHHH
Confidence 123457899999999999998765 3556778764 56666 89999554 578899999999
Q ss_pred HHHHh
Q 011833 468 EFLTR 472 (476)
Q Consensus 468 ~fL~~ 472 (476)
+||++
T Consensus 203 ~Fl~~ 207 (208)
T d1imja_ 203 DFLQG 207 (208)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99985
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.93 E-value=4.9e-25 Score=200.39 Aligned_cols=231 Identities=16% Similarity=0.211 Sum_probs=144.9
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
.+++|||+||++++...| ..+++.|+++||+|+++|+||||.|.....
T Consensus 10 ~~~~vvliHG~~~~~~~~-----~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~--------------------------- 57 (242)
T d1tqha_ 10 GERAVLLLHGFTGNSADV-----RMLGRFLESKGYTCHAPIYKGHGVPPEELV--------------------------- 57 (242)
T ss_dssp SSCEEEEECCTTCCTHHH-----HHHHHHHHHTTCEEEECCCTTSSSCHHHHT---------------------------
T ss_pred CCCeEEEECCCCCCHHHH-----HHHHHHHHHCCCEEEEEeCCCCcccccccc---------------------------
Confidence 357899999999999999 589999999999999999999999854322
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
.++..+.. .|+..++..+... +.
T Consensus 58 -----------------------------------------------------~~~~~~~~-~~~~~~~~~~~~~-~~-- 80 (242)
T d1tqha_ 58 -----------------------------------------------------HTGPDDWW-QDVMNGYEFLKNK-GY-- 80 (242)
T ss_dssp -----------------------------------------------------TCCHHHHH-HHHHHHHHHHHHH-TC--
T ss_pred -----------------------------------------------------ccchhHHH-HHHHHHHhhhhhc-cc--
Confidence 01112222 4555555555444 22
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccC
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPF 332 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (476)
++++++||||||.+++.++.++| ....++++++............... .....
T Consensus 81 ~~~~l~G~S~Gg~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~--- 133 (242)
T d1tqha_ 81 EKIAVAGLSLGGVFSLKLGYTVP-------IEGIVTMCAPMYIKSEETMYEGVLE-----------------YAREY--- 133 (242)
T ss_dssp CCEEEEEETHHHHHHHHHHTTSC-------CSCEEEESCCSSCCCHHHHHHHHHH-----------------HHHHH---
T ss_pred CceEEEEcchHHHHhhhhcccCc-------ccccccccccccccchhHHHHHHHH-----------------HHHHH---
Confidence 38999999999999999999876 4456666665544432211111100 00000
Q ss_pred CCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeC
Q 011833 333 ASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAAD 412 (476)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~ 412 (476)
... . ................... ......... .......+.++++|+|+++|+
T Consensus 134 ----------~~~-~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----------~~~~~~~~~~~~~p~lii~g~ 186 (242)
T d1tqha_ 134 ----------KKR-E----GKSEEQIEQEMEKFKQTPM-KTLKALQEL-----------IADVRDHLDLIYAPTFVVQAR 186 (242)
T ss_dssp ----------HHH-H----TCCHHHHHHHHHHHTTSCC-TTHHHHHHH-----------HHHHHHTGGGCCSCEEEEEET
T ss_pred ----------hhh-c----cchhhhHHHHHhhhhhhcc-chhhccccc-----------ccccccccceeccccceeecc
Confidence 000 0 0000101000000000000 000000000 011123577889999999999
Q ss_pred CCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 413 QDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 413 ~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
+|.++|++.++++++.+++.+++++++ +++||..++ .+.++++++.|.+||++-
T Consensus 187 ~D~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~gH~~~~--~~~~~~~~~~i~~Fl~~l 240 (242)
T d1tqha_ 187 HDEMINPDSANIIYNEIESPVKQIKWY-----EQSGHVITL--DQEKDQLHEDIYAFLESL 240 (242)
T ss_dssp TCSSSCTTHHHHHHHHCCCSSEEEEEE-----TTCCSSGGG--STTHHHHHHHHHHHHHHS
T ss_pred cCCccCHHHHHHHHHHcCCCCcEEEEE-----CCCCCcCcc--ccCHHHHHHHHHHHHHhC
Confidence 999999999999999998767788888 899995442 446789999999999874
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.93 E-value=5.5e-25 Score=214.84 Aligned_cols=129 Identities=13% Similarity=0.124 Sum_probs=98.6
Q ss_pred CCceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccc
Q 011833 64 ADELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 64 ~~e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~ 143 (476)
+.+.+++. +.||.+|++..+... +++||||+||++++...|. .. ..+...||+|+++|+||||.|+++
T Consensus 10 P~~~~~i~-~~dg~~i~y~~~G~~-----~g~pvvllHG~~g~~~~~~-----~~-~~~l~~~~~Vi~~D~rG~G~S~~~ 77 (313)
T d1azwa_ 10 PYQQGSLK-VDDRHTLYFEQCGNP-----HGKPVVMLHGGPGGGCNDK-----MR-RFHDPAKYRIVLFDQRGSGRSTPH 77 (313)
T ss_dssp CSEEEEEE-CSSSCEEEEEEEECT-----TSEEEEEECSTTTTCCCGG-----GG-GGSCTTTEEEEEECCTTSTTSBST
T ss_pred CCCCCEEE-eCCCcEEEEEEecCC-----CCCEEEEECCCCCCccchH-----HH-hHHhhcCCEEEEEeccccCCCCcc
Confidence 34677888 689999999887422 3588999999988887773 22 233457999999999999999764
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
...
T Consensus 78 ~~~----------------------------------------------------------------------------- 80 (313)
T d1azwa_ 78 ADL----------------------------------------------------------------------------- 80 (313)
T ss_dssp TCC-----------------------------------------------------------------------------
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 321
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
.+|++++++ +|+.++++.+ +. +++++|||||||.+++.+|.++| ++|++++++++...
T Consensus 81 -~~~~~~~~~-~dl~~~~~~l----~~--~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lv~~~~~~~ 138 (313)
T d1azwa_ 81 -VDNTTWDLV-ADIERLRTHL----GV--DRWQVFGGSWGSTLALAYAQTHP-----QQVTELVLRGIFLL 138 (313)
T ss_dssp -TTCCHHHHH-HHHHHHHHHT----TC--SSEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCCC
T ss_pred -cchhHHHHH-HHHHHHHHhh----cc--ccceeEEecCCcHHHHHHHHHhh-----hceeeeeEeccccc
Confidence 135556655 6777777655 33 48999999999999999999998 89999999987543
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=2.4e-24 Score=202.31 Aligned_cols=238 Identities=17% Similarity=0.170 Sum_probs=144.1
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhh
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKS 173 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (476)
+++|||+||+++++..| ..+++.|+ +||+|+++|+||||.|++...
T Consensus 11 ~~~lvllHG~~~~~~~~-----~~~~~~L~-~~~~vi~~D~~G~G~S~~~~~---------------------------- 56 (256)
T d1m33a_ 11 NVHLVLLHGWGLNAEVW-----RCIDEELS-SHFTLHLVDLPGFGRSRGFGA---------------------------- 56 (256)
T ss_dssp SSEEEEECCTTCCGGGG-----GGTHHHHH-TTSEEEEECCTTSTTCCSCCC----------------------------
T ss_pred CCeEEEECCCCCCHHHH-----HHHHHHHh-CCCEEEEEeCCCCCCcccccc----------------------------
Confidence 47899999999999999 58888886 579999999999999965321
Q ss_pred hHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCC
Q 011833 174 QLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDG 253 (476)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ 253 (476)
.++..+++.+... ..+
T Consensus 57 -------------------------------------------------------------~~~~d~~~~~~~~---~~~ 72 (256)
T d1m33a_ 57 -------------------------------------------------------------LSLADMAEAVLQQ---APD 72 (256)
T ss_dssp -------------------------------------------------------------CCHHHHHHHHHTT---SCS
T ss_pred -------------------------------------------------------------ccccccccccccc---ccc
Confidence 1222233333333 234
Q ss_pred cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccCC
Q 011833 254 KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFA 333 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (476)
+++++||||||.+++.+|.++| ..+++++++++............ +.. .....+...+
T Consensus 73 ~~~l~GhS~Gg~ia~~~a~~~p-----~~~~~l~~~~~~~~~~~~~~~~~----------------~~~-~~~~~~~~~~ 130 (256)
T d1m33a_ 73 KAIWLGWSLGGLVASQIALTHP-----ERVRALVTVASSPCFSARDEWPG----------------IKP-DVLAGFQQQL 130 (256)
T ss_dssp SEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCSCCBCBTTBCS----------------BCH-HHHHHHHHHH
T ss_pred ceeeeecccchHHHHHHHHhCC-----cccceeeeeecccccccchhhhh----------------hHH-HHHHHHHhhh
Confidence 8999999999999999999988 88999999886443222110000 000 0000000000
Q ss_pred CCchHHHHHHHHhhcC---CCCCCHHHH---HHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEE
Q 011833 334 SSPPYVLSWLKFLISA---PDMMHPELF---EKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVL 407 (476)
Q Consensus 334 ~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvL 407 (476)
. ......+...... ......... ....... .......+......... .++.+.++++++|+|
T Consensus 131 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~l~~i~~P~l 198 (256)
T d1m33a_ 131 S--DDQQRTVERFLALQTMGTETARQDARALKKTVLAL-PMPEVDVLNGGLEILKT---------VDLRQPLQNVSMPFL 198 (256)
T ss_dssp H--HHHHHHHHHHHHTTSTTSTTHHHHHHHHHHHHHTS-CCCCHHHHHHHHHHHHH---------CCCTTGGGGCCSCEE
T ss_pred h--hhhHHHHHHHhhhhhccccchhhHHHHHHHhhhhc-chhhHHHHHhhhhhhcc---------cchHHHHHhccCCcc
Confidence 0 0000001110000 000001111 1111111 11122222222222221 223356788999999
Q ss_pred EEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 408 ALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 408 ii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
+|+|++|.++|++.++.+.+.+++. +++++ +++||+.+ .+.|+++.+.|.+||++-
T Consensus 199 ii~G~~D~~~p~~~~~~l~~~~~~~--~~~~i-----~~~gH~~~---~e~p~~~~~~l~~fl~~i 254 (256)
T d1m33a_ 199 RLYGYLDGLVPRKVVPMLDKLWPHS--ESYIF-----AKAAHAPF---ISHPAEFCHLLVALKQRV 254 (256)
T ss_dssp EEEETTCSSSCGGGCC-CTTTCTTC--EEEEE-----TTCCSCHH---HHSHHHHHHHHHHHHTTS
T ss_pred ccccccCCCCCHHHHHHHHHHCCCC--EEEEE-----CCCCCchH---HHCHHHHHHHHHHHHHHc
Confidence 9999999999999999999999876 67777 89999544 678999999999999874
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.91 E-value=1.5e-23 Score=197.27 Aligned_cols=280 Identities=13% Similarity=0.067 Sum_probs=155.2
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
|..++.+ ||.++++.... .+|+|||+||+++++..| ..++..|++ +|+|+++|+||||.|++...
T Consensus 9 ~~~fi~~--~g~~i~y~~~G-------~g~~vvllHG~~~~~~~~-----~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~ 73 (298)
T d1mj5a_ 9 EKKFIEI--KGRRMAYIDEG-------TGDPILFQHGNPTSSYLW-----RNIMPHCAG-LGRLIACDLIGMGDSDKLDP 73 (298)
T ss_dssp CCEEEEE--TTEEEEEEEES-------CSSEEEEECCTTCCGGGG-----TTTGGGGTT-SSEEEEECCTTSTTSCCCSS
T ss_pred CCEEEEE--CCEEEEEEEEc-------CCCcEEEECCCCCCHHHH-----HHHHHHHhc-CCEEEEEeCCCCCCCCCCcc
Confidence 4567876 99999988762 358999999999999999 688888875 69999999999999976442
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
..
T Consensus 74 ~~------------------------------------------------------------------------------ 75 (298)
T d1mj5a_ 74 SG------------------------------------------------------------------------------ 75 (298)
T ss_dssp CS------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 10
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHh
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLL 305 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~ 305 (476)
..+.+...++..++..+.+..+. +++++|||||||.+++.++.++| .+|++++++++..............
T Consensus 76 --~~~~~~~~~~~~~~~~~~~~~~~--~~~~lvGhS~Gg~va~~~a~~~p-----~~v~~l~~~~~~~~~~~~~~~~~~~ 146 (298)
T d1mj5a_ 76 --PERYAYAEHRDYLDALWEALDLG--DRVVLVVHDWGSALGFDWARRHR-----ERVQGIAYMEAIAMPIEWADFPEQD 146 (298)
T ss_dssp --TTSSCHHHHHHHHHHHHHHTTCT--TCEEEEEEHHHHHHHHHHHHHTG-----GGEEEEEEEEECCSCBCGGGSCGGG
T ss_pred --ccccccchhhhhhcccccccccc--ccCeEEEecccchhHHHHHHHHH-----hhhheeeccccccccccchhhhhhh
Confidence 00111112333334444444443 48999999999999999999998 8999999998765433221100000
Q ss_pred hcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC
Q 011833 306 LPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG 385 (476)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (476)
.. ...... . ....... . ....+......... ...........+..... ..... ............
T Consensus 147 ~~---~~~~~~-~--~~~~~~~----~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~ 211 (298)
T d1mj5a_ 147 RD---LFQAFR-S--QAGEELV----L-QDNVFVEQVLPGLI--LRPLSEAEMAAYREPFL-AAGEA-RRPTLSWPRQIP 211 (298)
T ss_dssp HH---HHHHHH-S--TTHHHHH----T-TTCHHHHTHHHHTS--SSCCCHHHHHHHHGGGC-SSSGG-GHHHHHTGGGSC
T ss_pred hh---hhhhhh-h--hhhhhhh----h-hhhhhhhhhccccc--cccchhhhhhhhhhhhc-cchhh-hhhhhhhhhhhh
Confidence 00 000000 0 0000000 0 00000000000000 01111111111111110 00000 000000000000
Q ss_pred ccccC-----CcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCcc
Q 011833 386 LCDRS-----GTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAY 460 (476)
Q Consensus 386 ~~~~~-----g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~ 460 (476)
..... ......+.+.++++|+++++|++|.+++ +..+++.+.+++. .+++ .++||+ ...|.|+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~-~~~~~~~~~~p~~--~~~~------~~~GH~---~~~e~P~ 279 (298)
T d1mj5a_ 212 IAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTT-GRMRDFCRTWPNQ--TEIT------VAGAHF---IQEDSPD 279 (298)
T ss_dssp BTTBSHHHHHHHHHHHHHHTTCCSCEEEEEEEECSSSS-HHHHHHHTTCSSE--EEEE------EEESSC---GGGTCHH
T ss_pred hcchhhhhhhhhhhhhhhhhhcceeEEEEecCCCCcCh-HHHHHHHHHCCCC--EEEE------eCCCCc---hHHhCHH
Confidence 00000 0111123567889999999999998776 4567888888864 4454 367994 4478899
Q ss_pred chhHHHHHHHHhhc
Q 011833 461 QVYPCIIEFLTRHD 474 (476)
Q Consensus 461 ~v~~~i~~fL~~~~ 474 (476)
++.+.|.+||++..
T Consensus 280 ~v~~~i~~fl~~~~ 293 (298)
T d1mj5a_ 280 EIGAAIAAFVRRLR 293 (298)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhhhc
Confidence 99999999999864
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.91 E-value=2.1e-23 Score=197.36 Aligned_cols=128 Identities=13% Similarity=0.130 Sum_probs=96.3
Q ss_pred CceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccc
Q 011833 65 DELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 65 ~e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
.+.++|. +.||.++++..+.+. .+|||||+||+++++..| ..+...| .+||+|+++|+||+|.|++..
T Consensus 11 ~~~~~v~-~~dG~~i~y~~~G~~-----~g~pvvllHG~~~~~~~w-----~~~~~~l-~~~~~vi~~D~rG~G~S~~~~ 78 (313)
T d1wm1a_ 11 YDSGWLD-TGDGHRIYWELSGNP-----NGKPAVFIHGGPGGGISP-----HHRQLFD-PERYKVLLFDQRGCGRSRPHA 78 (313)
T ss_dssp SEEEEEE-CSSSCEEEEEEEECT-----TSEEEEEECCTTTCCCCG-----GGGGGSC-TTTEEEEEECCTTSTTCBSTT
T ss_pred CcCCEEE-eCCCcEEEEEEecCC-----CCCeEEEECCCCCcccch-----HHHHHHh-hcCCEEEEEeCCCcccccccc
Confidence 4678888 689999999887532 358899999999999999 3555555 459999999999999997643
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
..
T Consensus 79 ~~------------------------------------------------------------------------------ 80 (313)
T d1wm1a_ 79 SL------------------------------------------------------------------------------ 80 (313)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 21
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
..++..++. +|+.+++ ++.+. .+++++|||+||.+++.++..+| .+|++++++++...
T Consensus 81 ~~~~~~~~~-~d~~~~~----~~~~~--~~~~~vg~s~g~~~~~~~a~~~~-----~~v~~~v~~~~~~~ 138 (313)
T d1wm1a_ 81 DNNTTWHLV-ADIERLR----EMAGV--EQWLVFGGSWGSTLALAYAQTHP-----ERVSEMVLRGIFTL 138 (313)
T ss_dssp TTCSHHHHH-HHHHHHH----HHTTC--SSEEEEEETHHHHHHHHHHHHCG-----GGEEEEEEESCCCC
T ss_pred cccchhhHH-HHHHhhh----hccCC--CcceeEeeecCCchhhHHHHHHh-----hhheeeeecccccc
Confidence 123333333 4444444 34444 38999999999999999999987 88999999887543
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.90 E-value=3.1e-23 Score=209.78 Aligned_cols=237 Identities=15% Similarity=0.195 Sum_probs=161.8
Q ss_pred CceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccc
Q 011833 65 DELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRV 144 (476)
Q Consensus 65 ~e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~ 144 (476)
.|...+.+ +|.+|.++.+.|... ++.|+||++||+.++...| ..++..|+++||.|+++|+||+|.|.+..
T Consensus 106 ~e~v~ip~--dg~~l~g~l~~P~~~--~~~P~Vi~~hG~~~~~e~~-----~~~~~~l~~~G~~vl~~D~~G~G~s~~~~ 176 (360)
T d2jbwa1 106 AERHELVV--DGIPMPVYVRIPEGP--GPHPAVIMLGGLESTKEES-----FQMENLVLDRGMATATFDGPGQGEMFEYK 176 (360)
T ss_dssp EEEEEEEE--TTEEEEEEEECCSSS--CCEEEEEEECCSSCCTTTT-----HHHHHHHHHTTCEEEEECCTTSGGGTTTC
T ss_pred eEEeecCc--CCcccceEEEecCCC--CCceEEEEeCCCCccHHHH-----HHHHHHHHhcCCEEEEEccccccccCccc
Confidence 35555554 999999999988643 4678999999998887666 46889999999999999999999985432
Q ss_pred ccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccc
Q 011833 145 EFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVK 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (476)
...
T Consensus 177 ~~~----------------------------------------------------------------------------- 179 (360)
T d2jbwa1 177 RIA----------------------------------------------------------------------------- 179 (360)
T ss_dssp CSC-----------------------------------------------------------------------------
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 100
Q ss_pred cCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHH
Q 011833 225 NDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRL 304 (476)
Q Consensus 225 ~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~ 304 (476)
.++ ..++.++++++..+...+.++|.++||||||.+++.+|+.. ++|+++|++++..++......
T Consensus 180 -----~~~-~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~------pri~a~V~~~~~~~~~~~~~~--- 244 (360)
T d2jbwa1 180 -----GDY-EKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACE------PRLAACISWGGFSDLDYWDLE--- 244 (360)
T ss_dssp -----SCH-HHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHC------TTCCEEEEESCCSCSTTGGGS---
T ss_pred -----ccH-HHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcC------CCcceEEEEcccccHHHHhhh---
Confidence 011 23566778888877655556899999999999999999874 569999999887654321100
Q ss_pred hhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhC
Q 011833 305 LLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEG 384 (476)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (476)
.+.....+....... ..+.. ......
T Consensus 245 -------------------------------~~~~~~~~~~~~~~~---~~~~~---------------~~~~~~----- 270 (360)
T d2jbwa1 245 -------------------------------TPLTKESWKYVSKVD---TLEEA---------------RLHVHA----- 270 (360)
T ss_dssp -------------------------------CHHHHHHHHHHTTCS---SHHHH---------------HHHHHH-----
T ss_pred -------------------------------hhhhhHHHHHhccCC---chHHH---------------HHHHHh-----
Confidence 000000000000000 00000 000000
Q ss_pred CccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhH
Q 011833 385 GLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYP 464 (476)
Q Consensus 385 ~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~ 464 (476)
.+.....+.+|+||+|+++|++|. +|++.++.+++.++...+.+.++ ++.+|.. .+.+.++..
T Consensus 271 -------~~~~~~~~~~i~~P~Lii~G~~D~-vp~~~~~~l~~~~~~~~~~l~~~-----~~g~H~~----~~~~~~~~~ 333 (360)
T d2jbwa1 271 -------ALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVE-----KDGDHCC----HNLGIRPRL 333 (360)
T ss_dssp -------HTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEE-----TTCCGGG----GGGTTHHHH
T ss_pred -------hcchhhhHhhCCCCEEEEEeCCCC-cCHHHHHHHHHhcCCCCeEEEEE-----CCCCcCC----CcChHHHHH
Confidence 011224578899999999999998 59999999999998877777776 7888943 234577888
Q ss_pred HHHHHHHhh
Q 011833 465 CIIEFLTRH 473 (476)
Q Consensus 465 ~i~~fL~~~ 473 (476)
.|.+||+++
T Consensus 334 ~i~dWl~~~ 342 (360)
T d2jbwa1 334 EMADWLYDV 342 (360)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999875
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.88 E-value=8.2e-22 Score=186.44 Aligned_cols=200 Identities=17% Similarity=0.189 Sum_probs=145.5
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCC---CCCcce-eecCCCCCHHHHHHhCCCcEEEecCCCCCCccc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGI---GTNAIG-YDLSPEYSFARYMSGQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~---~~~~~~-~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~ 142 (476)
..++. ..+| +|.+....|.+.++.+.+++|++|+. +++... +. ..+++.|+++||.|+.+|+||+|.|.+
T Consensus 10 ~l~i~-gp~G-~l~~~~~~p~~~~~~~~~~~vl~Hph~~~GG~~~~~~~----~~la~~l~~~G~~vlrfd~RG~G~S~g 83 (218)
T d2fuka1 10 ALTLD-GPVG-PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVV----TMAARALRELGITVVRFNFRSVGTSAG 83 (218)
T ss_dssp EEEEE-ETTE-EEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHH----HHHHHHHHTTTCEEEEECCTTSTTCCS
T ss_pred EEEEe-CCCc-cEEEEEEcCCCCCCCCCcEEEEECCCCCCCcCCCChHH----HHHHHHHHHcCCeEEEeecCCCccCCC
Confidence 34555 4566 67777776766545555667899954 333222 11 367889999999999999999999965
Q ss_pred ccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLI 222 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (476)
...
T Consensus 84 ~~~----------------------------------------------------------------------------- 86 (218)
T d2fuka1 84 SFD----------------------------------------------------------------------------- 86 (218)
T ss_dssp CCC-----------------------------------------------------------------------------
T ss_pred ccC-----------------------------------------------------------------------------
Confidence 321
Q ss_pred cccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhH
Q 011833 223 VKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLL 302 (476)
Q Consensus 223 ~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~ 302 (476)
+... ..+|+.++++++.++... .+++++||||||.+++.++.+ .+++++|+++++.....
T Consensus 87 -----~~~~-~~~D~~a~~~~~~~~~~~--~~v~l~G~S~Gg~va~~~a~~-------~~~~~lil~ap~~~~~~----- 146 (218)
T d2fuka1 87 -----HGDG-EQDDLRAVAEWVRAQRPT--DTLWLAGFSFGAYVSLRAAAA-------LEPQVLISIAPPAGRWD----- 146 (218)
T ss_dssp -----TTTH-HHHHHHHHHHHHHHHCTT--SEEEEEEETHHHHHHHHHHHH-------HCCSEEEEESCCBTTBC-----
T ss_pred -----cCcc-hHHHHHHHHHHHhhcccC--ceEEEEEEcccchhhhhhhcc-------cccceEEEeCCcccchh-----
Confidence 0011 137999999999988655 489999999999999998887 34889999987642100
Q ss_pred HHhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHH
Q 011833 303 RLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQ 382 (476)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (476)
+
T Consensus 147 -----------------------------~-------------------------------------------------- 147 (218)
T d2fuka1 147 -----------------------------F-------------------------------------------------- 147 (218)
T ss_dssp -----------------------------C--------------------------------------------------
T ss_pred -----------------------------h--------------------------------------------------
Confidence 0
Q ss_pred hCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccch
Q 011833 383 EGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQV 462 (476)
Q Consensus 383 ~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v 462 (476)
...++.+|+|+|||++|.++|++.++++.+.++.. ++++++ |+++|+ +. ...+++
T Consensus 148 ---------------~~~~~~~P~Lvi~G~~D~~vp~~~~~~l~~~~~~~-~~l~~i-----~ga~H~---f~-~~~~~l 202 (218)
T d2fuka1 148 ---------------SDVQPPAQWLVIQGDADEIVDPQAVYDWLETLEQQ-PTLVRM-----PDTSHF---FH-RKLIDL 202 (218)
T ss_dssp ---------------TTCCCCSSEEEEEETTCSSSCHHHHHHHHTTCSSC-CEEEEE-----TTCCTT---CT-TCHHHH
T ss_pred ---------------hccccccceeeEecCCCcCcCHHHHHHHHHHccCC-ceEEEe-----CCCCCC---CC-CCHHHH
Confidence 01135689999999999999999999999988764 567777 999992 22 222568
Q ss_pred hHHHHHHHHhh
Q 011833 463 YPCIIEFLTRH 473 (476)
Q Consensus 463 ~~~i~~fL~~~ 473 (476)
-+.+.+|++++
T Consensus 203 ~~~~~~~v~~~ 213 (218)
T d2fuka1 203 RGALQHGVRRW 213 (218)
T ss_dssp HHHHHHHHGGG
T ss_pred HHHHHHHHHHh
Confidence 88888999886
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.88 E-value=5.7e-22 Score=191.81 Aligned_cols=253 Identities=15% Similarity=0.142 Sum_probs=159.2
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.||.+|.++.+.|.+. ++.|+||++||++++...| ...+..|+++||.|+++|+||+|.|.+.....
T Consensus 63 ~~dg~~i~~~l~~P~~~--~~~P~vv~~HG~~~~~~~~-----~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~----- 130 (318)
T d1l7aa_ 63 SFGNARITGWYAVPDKE--GPHPAIVKYHGYNASYDGE-----IHEMVNWALHGYATFGMLVRGQQRSEDTSISP----- 130 (318)
T ss_dssp EGGGEEEEEEEEEESSC--SCEEEEEEECCTTCCSGGG-----HHHHHHHHHTTCEEEEECCTTTSSSCCCCCCS-----
T ss_pred CCCCcEEEEEEEecCCC--CCceEEEEecCCCCCccch-----HHHHHHHHHCCCEEEEEeeCCCCCCCCCcccc-----
Confidence 46899999999988754 4678999999999998888 47899999999999999999999997644210
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
+ ...+.... . .+..........+
T Consensus 131 ------~---~~~~~~~~---------------------~---------------------------~~~~~~~~~~~~~ 153 (318)
T d1l7aa_ 131 ------H---GHALGWMT---------------------K---------------------------GILDKDTYYYRGV 153 (318)
T ss_dssp ------S---CCSSSSTT---------------------T---------------------------TTTCTTTCHHHHH
T ss_pred ------h---hhhhcchh---------------------h---------------------------chhhhhhhhhHHH
Confidence 0 00000000 0 0000001111222
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchh
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPI 312 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~ 312 (476)
. .|....++++..+...+..++.++|+|+||..++..+... .++++++...+....... .
T Consensus 154 ~-~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~------~~~~~~~~~~~~~~~~~~------~------- 213 (318)
T d1l7aa_ 154 Y-LDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALS------DIPKAAVADYPYLSNFER------A------- 213 (318)
T ss_dssp H-HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHC------SCCSEEEEESCCSCCHHH------H-------
T ss_pred H-HHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcC------cccceEEEeccccccHHH------H-------
Confidence 2 5778888888887665556899999999999999998885 456777665554321100 0
Q ss_pred hhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCc
Q 011833 313 QALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGT 392 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 392 (476)
......... ......... . .........+.. .. .
T Consensus 214 -------------~~~~~~~~~--~~~~~~~~~-~--------------------~~~~~~~~~~~~-~~---------~ 247 (318)
T d1l7aa_ 214 -------------IDVALEQPY--LEINSFFRR-N--------------------GSPETEVQAMKT-LS---------Y 247 (318)
T ss_dssp -------------HHHCCSTTT--THHHHHHHH-S--------------------CCHHHHHHHHHH-HH---------T
T ss_pred -------------hhccccccc--chhhhhhhc-c--------------------cccccccccccc-cc---------c
Confidence 000000000 000000000 0 000000000000 00 0
Q ss_pred ccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 393 FFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 393 ~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
......+.++++|+|+++|++|.++|++.+.+++++++. .++++++ |++||.. .+++.+.+++||++
T Consensus 248 ~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~-~~~l~~~-----~~~gH~~-------~~~~~~~~~~fl~~ 314 (318)
T d1l7aa_ 248 FDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET-KKELKVY-----RYFGHEY-------IPAFQTEKLAFFKQ 314 (318)
T ss_dssp TCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEE-----TTCCSSC-------CHHHHHHHHHHHHH
T ss_pred cccccccccCCCCEEEEEECCCCCcCHHHHHHHHHHcCC-CcEEEEE-----CCCCCCC-------cHHHHHHHHHHHHH
Confidence 111235678999999999999999999999999999975 4678887 8999932 36788999999998
Q ss_pred h
Q 011833 473 H 473 (476)
Q Consensus 473 ~ 473 (476)
+
T Consensus 315 ~ 315 (318)
T d1l7aa_ 315 I 315 (318)
T ss_dssp H
T ss_pred h
Confidence 6
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.88 E-value=5.6e-22 Score=182.30 Aligned_cols=46 Identities=15% Similarity=0.291 Sum_probs=40.9
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccc
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~ 143 (476)
++|+|||+||+++++..| ..+++.|++.||+|+++|+||||.|...
T Consensus 15 ~~P~ivllHG~~~~~~~~-----~~~~~~L~~~g~~vi~~Dl~G~G~s~~~ 60 (264)
T d1r3da_ 15 RTPLVVLVHGLLGSGADW-----QPVLSHLARTQCAALTLDLPGHGTNPER 60 (264)
T ss_dssp TBCEEEEECCTTCCGGGG-----HHHHHHHTTSSCEEEEECCTTCSSCC--
T ss_pred CCCeEEEeCCCCCCHHHH-----HHHHHHHHhCCCEEEEEecccccccccc
Confidence 468999999999999999 5899999999999999999999998653
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.87 E-value=7.5e-22 Score=188.91 Aligned_cols=242 Identities=17% Similarity=0.199 Sum_probs=161.6
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCC--CCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIG--TNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~--~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~ 143 (476)
+..++. +.||.+|.++.|.|... +++.|+||++||.+ .....| ..++..|+++||.|+++|+||+|.+...
T Consensus 13 ~~v~~~-s~dG~~i~~~l~~p~~~-~~~~Pviv~~HGG~~~~~~~~~-----~~~~~~la~~G~~v~~~d~r~~~~~g~~ 85 (260)
T d2hu7a2 13 RLVWVE-SFDGSRVPTYVLESGRA-PTPGPTVVLVHGGPFAEDSDSW-----DTFAASLAAAGFHVVMPNYRGSTGYGEE 85 (260)
T ss_dssp EEEEEE-CTTSCEEEEEEEEETTS-CSSEEEEEEECSSSSCCCCSSC-----CHHHHHHHHHTCEEEEECCTTCSSSCHH
T ss_pred EEEEEE-CCCCCEEEEEEEeCCCC-CCCceEEEEECCCCccCCCccc-----cHHHHHHHhhccccccceeeeccccccc
Confidence 344566 78999999999988654 45568899999843 333445 5778899999999999999999876432
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
.... .
T Consensus 86 ~~~~---------------------------------------------------------------~------------ 90 (260)
T d2hu7a2 86 WRLK---------------------------------------------------------------I------------ 90 (260)
T ss_dssp HHHT---------------------------------------------------------------T------------
T ss_pred cccc---------------------------------------------------------------c------------
Confidence 1100 0
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHH
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLR 303 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~ 303 (476)
. ..+.....+|+.++++++++.... .++.++|+|+||.+++.++..+| ..+++++..++..++...
T Consensus 91 ~--~~~~~~~~~D~~~~~~~l~~~~~~--~~~~i~g~s~gg~~~~~~~~~~~-----~~~~a~i~~~~~~~~~~~----- 156 (260)
T d2hu7a2 91 I--GDPCGGELEDVSAAARWARESGLA--SELYIMGYSYGGYMTLCALTMKP-----GLFKAGVAGASVVDWEEM----- 156 (260)
T ss_dssp T--TCTTTHHHHHHHHHHHHHHHTTCE--EEEEEEEETHHHHHHHHHHHHST-----TSSSEEEEESCCCCHHHH-----
T ss_pred c--cccchhhhhhhccccccccccccc--ceeeccccccccccccchhccCC-----cccccccccccchhhhhh-----
Confidence 0 011111236899999999887543 48999999999999999999877 678898888876542210
Q ss_pred HhhcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHh
Q 011833 304 LLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQE 383 (476)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (476)
... ........+..... .+.+.+..
T Consensus 157 --------------------------~~~--~~~~~~~~~~~~~~----~~~~~~~~----------------------- 181 (260)
T d2hu7a2 157 --------------------------YEL--SDAAFRNFIEQLTG----GSREIMRS----------------------- 181 (260)
T ss_dssp --------------------------HHT--CCHHHHHHHHHHHC----SCHHHHHH-----------------------
T ss_pred --------------------------hcc--cccccccccccccc----cccccccc-----------------------
Confidence 000 00000011111110 01111111
Q ss_pred CCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccc
Q 011833 384 GGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQ 461 (476)
Q Consensus 384 ~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~ 461 (476)
......+.++++|+|++||++|.+||++.+.++++.+.+. .+++.++ |+.+|. +...+...+
T Consensus 182 ---------~~~~~~~~~~~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~-----~g~~H~--~~~~e~~~~ 245 (260)
T d2hu7a2 182 ---------RSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHII-----PDAGHA--INTMEDAVK 245 (260)
T ss_dssp ---------TCGGGCGGGCCSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEE-----TTCCSS--CCBHHHHHH
T ss_pred ---------cchhhcccccCCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEE-----CcCCCC--CCChHhHHH
Confidence 1112356788999999999999999999999999887543 3466666 899993 223455578
Q ss_pred hhHHHHHHHHhhc
Q 011833 462 VYPCIIEFLTRHD 474 (476)
Q Consensus 462 v~~~i~~fL~~~~ 474 (476)
++..+++||++|-
T Consensus 246 ~~~~~~~fl~~hl 258 (260)
T d2hu7a2 246 ILLPAVFFLATQR 258 (260)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 8899999999874
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.84 E-value=4.1e-21 Score=195.38 Aligned_cols=122 Identities=12% Similarity=0.097 Sum_probs=95.3
Q ss_pred CCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCC------CcEEEecCCCCCCcccccccC
Q 011833 74 NSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQG------FDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~G------y~V~~~D~rG~G~S~~~~~~~ 147 (476)
-||.+|++.+....+ +..+||||+||++++...| ..++..|++.| |+|+++|+||+|.|+++...
T Consensus 89 i~G~~iHf~h~~~~~---~~~~pLlLlHG~P~s~~~w-----~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~- 159 (394)
T d1qo7a_ 89 IEGLTIHFAALFSER---EDAVPIALLHGWPGSFVEF-----YPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLD- 159 (394)
T ss_dssp ETTEEEEEEEECCSC---TTCEEEEEECCSSCCGGGG-----HHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSS-
T ss_pred ECCEEEEEEEEeccC---CCCCEEEEeccccccHHHH-----HHHHHhhccccCCcccceeeecccccccCCCCCCCCC-
Confidence 499999998875443 3578999999999999999 69999999988 99999999999999875421
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
..|
T Consensus 160 -----------------------------------------------------------------------------~~y 162 (394)
T d1qo7a_ 160 -----------------------------------------------------------------------------KDF 162 (394)
T ss_dssp -----------------------------------------------------------------------------SCC
T ss_pred -----------------------------------------------------------------------------Ccc
Confidence 024
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
++.+++ .|+.++++ ..+. .+.+++|||+||.++..+++.+| ..+.+++++....
T Consensus 163 ~~~~~a-~~~~~l~~----~lg~--~~~~~vg~~~Gg~v~~~~a~~~p-----~~~~~~~l~~~~~ 216 (394)
T d1qo7a_ 163 GLMDNA-RVVDQLMK----DLGF--GSGYIIQGGDIGSFVGRLLGVGF-----DACKAVHLNLCAM 216 (394)
T ss_dssp CHHHHH-HHHHHHHH----HTTC--TTCEEEEECTHHHHHHHHHHHHC-----TTEEEEEESCCCC
T ss_pred CHHHHH-HHHHHHHh----hccC--cceEEEEecCchhHHHHHHHHhh-----ccccceeEeeecc
Confidence 444444 45555544 3343 38999999999999999999887 7788888876543
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=7.8e-22 Score=182.92 Aligned_cols=103 Identities=18% Similarity=0.247 Sum_probs=81.8
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhC--CCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccch
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQ--GFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQS 171 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~--Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 171 (476)
++||||+||+++++..| ..++..|.+. ||.|+++|+||||.|.++..
T Consensus 2 ~~PvvllHG~~~~~~~~-----~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~~-------------------------- 50 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSYSF-----RHLLEYINETHPGTVVTVLDLFDGRESLRPLW-------------------------- 50 (268)
T ss_dssp CCCEEEECCTTCCGGGG-----HHHHHHHHHHSTTCCEEECCSSCSGGGGSCHH--------------------------
T ss_pred CCCEEEECCCCCCHHHH-----HHHHHHHHhhCCCeEEEEeCCCCCCCCCCccc--------------------------
Confidence 57899999999999999 5899999875 89999999999999965331
Q ss_pred hhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCC
Q 011833 172 KSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPK 251 (476)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~ 251 (476)
+++++++ +|+.++++.+ +
T Consensus 51 -------------------------------------------------------~~~~~~~-~~l~~~l~~l----~-- 68 (268)
T d1pjaa_ 51 -------------------------------------------------------EQVQGFR-EAVVPIMAKA----P-- 68 (268)
T ss_dssp -------------------------------------------------------HHHHHHH-HHHHHHHHHC----T--
T ss_pred -------------------------------------------------------cCHHHHH-HHHHHHHhcc----C--
Confidence 2233334 5555555433 3
Q ss_pred CCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 252 DGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 252 ~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
+++++|||||||.+++.+|.++| +.+|+++|+++++..
T Consensus 69 -~~~~lvGhS~GG~ia~~~a~~~p----~~~v~~lvl~~~~~~ 106 (268)
T d1pjaa_ 69 -QGVHLICYSQGGLVCRALLSVMD----DHNVDSFISLSSPQM 106 (268)
T ss_dssp -TCEEEEEETHHHHHHHHHHHHCT----TCCEEEEEEESCCTT
T ss_pred -CeEEEEccccHHHHHHHHHHHCC----ccccceEEEECCCCc
Confidence 48999999999999999999998 347999999997543
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.84 E-value=4.9e-20 Score=179.75 Aligned_cols=259 Identities=14% Similarity=0.179 Sum_probs=154.1
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 73 ~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
+.||.+|.++.+.|... .++.|+||++||++.+...| .....++++||.|+++|+||+|.|.......
T Consensus 62 s~dG~~l~~~l~~P~~~-~~~~P~Vv~~hG~~~~~~~~------~~~~~~a~~G~~v~~~D~rG~G~s~~~~~~~----- 129 (322)
T d1vlqa_ 62 GYRGQRIKGWLLVPKLE-EEKLPCVVQYIGYNGGRGFP------HDWLFWPSMGYICFVMDTRGQGSGWLKGDTP----- 129 (322)
T ss_dssp CGGGCEEEEEEEEECCS-CSSEEEEEECCCTTCCCCCG------GGGCHHHHTTCEEEEECCTTCCCSSSCCCCC-----
T ss_pred CCCCcEEEEEEEeccCC-CCCccEEEEecCCCCCcCcH------HHHHHHHhCCCEEEEeeccccCCCCCCcccc-----
Confidence 46899999999988654 34568899999998876655 3456788999999999999999996643210
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
+...... +...+.+..+. ..+ ...+....
T Consensus 130 --------~~~~~~~---------------------------~~~~~~~~~~g-~~~--------------~~~~~~~~- 158 (322)
T d1vlqa_ 130 --------DYPEGPV---------------------------DPQYPGFMTRG-ILD--------------PRTYYYRR- 158 (322)
T ss_dssp --------BCCSSSB---------------------------CCCCSSSTTTT-TTC--------------TTTCHHHH-
T ss_pred --------ccccccc---------------------------cccccchhhhc-hhh--------------hhhhhhHH-
Confidence 0000000 00000000000 000 00011111
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchh
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPI 312 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~ 312 (476)
...|+.++++++..+...+..++.++|+|+||.+++.+++.. .++++++...+....... .
T Consensus 159 ~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~------~~~~a~v~~~~~~~~~~~------~------- 219 (322)
T d1vlqa_ 159 VFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALS------KKAKALLCDVPFLCHFRR------A------- 219 (322)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHC------SSCCEEEEESCCSCCHHH------H-------
T ss_pred HHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcC------CCccEEEEeCCccccHHH------H-------
Confidence 236888899999887766656899999999999999888774 568888876654321100 0
Q ss_pred hhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCc
Q 011833 313 QALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGT 392 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 392 (476)
....... .+ .... ..........+...+.+ . .
T Consensus 220 --------------~~~~~~~---~~-~~~~-~~~~~~~~~~~~~~~~~-----------------~------------~ 251 (322)
T d1vlqa_ 220 --------------VQLVDTH---PY-AEIT-NFLKTHRDKEEIVFRTL-----------------S------------Y 251 (322)
T ss_dssp --------------HHHCCCT---TH-HHHH-HHHHHCTTCHHHHHHHH-----------------H------------T
T ss_pred --------------Hhhcccc---ch-hhHH-hhhhcCcchhhhHHHHh-----------------h------------h
Confidence 0000000 00 0000 00000000000100000 0 0
Q ss_pred ccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 393 FFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 393 ~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
++....+.++++|+|+++|++|.++|++.+.+++++++. .++++++ |+.+|.. .........++||++
T Consensus 252 ~d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~-~~~l~~~-----p~~~H~~------~~~~~~~~~~~~l~~ 319 (322)
T d1vlqa_ 252 FDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAG-PKEIRIY-----PYNNHEG------GGSFQAVEQVKFLKK 319 (322)
T ss_dssp TCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEE-----TTCCTTT------THHHHHHHHHHHHHH
T ss_pred hhHHHHHhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCC-CeEEEEE-----CCCCCCC------ccccCHHHHHHHHHH
Confidence 111235678999999999999999999999999999975 4788887 8999921 123344567899987
Q ss_pred h
Q 011833 473 H 473 (476)
Q Consensus 473 ~ 473 (476)
+
T Consensus 320 ~ 320 (322)
T d1vlqa_ 320 L 320 (322)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.82 E-value=1e-19 Score=164.24 Aligned_cols=64 Identities=14% Similarity=0.171 Sum_probs=49.1
Q ss_pred CCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 401 KTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 401 ~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
++..|+++|+|++|.++|++..+.+++.++ . +++++ +++||+-...+.....++.+.|.+||++
T Consensus 123 ~~~~p~lvi~g~~D~~vp~~~~~~l~~~~~-~--~~~~~-----~~~gH~~~~~~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 123 ESAKHRAVIASKDDQIVPFSFSKDLAQQID-A--ALYEV-----QHGGHFLEDEGFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp HHEEEEEEEEETTCSSSCHHHHHHHHHHTT-C--EEEEE-----TTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred cCCCCEEEEecCCCCCCCHHHHHHHHHHcC-C--EEEEe-----CCCCCcCccccCcccHHHHHHHHHHHcC
Confidence 357899999999999999999999999985 2 67777 8999943221222335788888888864
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=1.3e-19 Score=172.77 Aligned_cols=239 Identities=15% Similarity=0.204 Sum_probs=145.6
Q ss_pred CCceEEEEEEEcCCCCCCCC-CCcEEEecCCCCCc---ceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcc
Q 011833 74 NSDWRLALWRYLPSPAAPQR-NHPLLLLSGIGTNA---IGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGED 149 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~-~~~VlllHG~~~~~---~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~ 149 (476)
.||..|.++.+.|.....++ .|+||++||.+... ..|. .......|+++||.|+++|+||.+.+...-.
T Consensus 10 ~dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~---~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~---- 82 (258)
T d1xfda2 10 IDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFE---VSWETVMVSSHGAVVVKCDGRGSGFQGTKLL---- 82 (258)
T ss_dssp ETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCC---CSHHHHHHHTTCCEEECCCCTTCSSSHHHHH----
T ss_pred eCCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcC---cchHHHHHhcCCcEEEEeccccccccchhHh----
Confidence 49999999999887643333 37889999963322 2231 1123567899999999999999664321000
Q ss_pred ccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCc
Q 011833 150 SMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDF 229 (476)
Q Consensus 150 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (476)
.. . ..++..
T Consensus 83 ------------------~~-----------------------------------------~------------~~~~g~ 91 (258)
T d1xfda2 83 ------------------HE-----------------------------------------V------------RRRLGL 91 (258)
T ss_dssp ------------------HT-----------------------------------------T------------TTCTTT
T ss_pred ------------------hh-----------------------------------------h------------hccchh
Confidence 00 0 001111
Q ss_pred hhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCc
Q 011833 230 DHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLS 309 (476)
Q Consensus 230 ~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~ 309 (476)
. ...|+.++++++.++...+.++|.++|||+||.+++.++...+- .....++....+++..........
T Consensus 92 ~--~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------- 160 (258)
T d1xfda2 92 L--EEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGE-NQGQTFTCGSALSPITDFKLYASA-------- 160 (258)
T ss_dssp H--HHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSS-TTCCCCSEEEEESCCCCTTSSBHH--------
T ss_pred H--HHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCc-ccceeeeeeeccccceeeeccccc--------
Confidence 1 23688899999988877666789999999999999888877651 112446666665554332211000
Q ss_pred chhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCcccc
Q 011833 310 DPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDR 389 (476)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (476)
... .+. .... .+++.+ .
T Consensus 161 ---------------~~~-------------~~~----~~~~-~~~~~~----------------------------~-- 177 (258)
T d1xfda2 161 ---------------FSE-------------RYL----GLHG-LDNRAY----------------------------E-- 177 (258)
T ss_dssp ---------------HHH-------------HHH----CCCS-SCCSST----------------------------T--
T ss_pred ---------------ccc-------------ccc----cccc-cchHHh----------------------------h--
Confidence 000 000 0000 000000 0
Q ss_pred CCcccccccCCC-CcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchhHHH
Q 011833 390 SGTFFYKDHIGK-TNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCI 466 (476)
Q Consensus 390 ~g~~~~~~~l~~-i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i 466 (476)
.......+.+ .++|+|+++|++|..+|++.+.++.+.+... ..++.++ |+.+|. +...+....+++.+
T Consensus 178 --~~s~~~~~~~~~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~-----p~~~H~--~~~~~~~~~~~~~~ 248 (258)
T d1xfda2 178 --MTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIY-----PDESHY--FTSSSLKQHLYRSI 248 (258)
T ss_dssp --TTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEE-----TTCCSS--CCCHHHHHHHHHHH
T ss_pred --ccchhhhhhhhhcccccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEE-----CCCCCC--CCCCcCHHHHHHHH
Confidence 0000112222 3789999999999999999999988876443 3467776 899992 22334456788999
Q ss_pred HHHHHhh
Q 011833 467 IEFLTRH 473 (476)
Q Consensus 467 ~~fL~~~ 473 (476)
++||+++
T Consensus 249 ~~f~~~~ 255 (258)
T d1xfda2 249 INFFVEC 255 (258)
T ss_dssp HHHHTTT
T ss_pred HHHHHHh
Confidence 9999875
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.78 E-value=1.4e-18 Score=165.16 Aligned_cols=239 Identities=12% Similarity=0.093 Sum_probs=146.3
Q ss_pred CCceEEEEEEEcCCCCCCCCC-CcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccc
Q 011833 74 NSDWRLALWRYLPSPAAPQRN-HPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMI 152 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~~-~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~ 152 (476)
.||.+|.++.+.|.+-.++++ |+||++||.+.................++++||.|+.+|+||+|.+.....
T Consensus 11 ~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~~~~------- 83 (258)
T d2bgra2 11 LNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIM------- 83 (258)
T ss_dssp ETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHH-------
T ss_pred eCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcchHHH-------
Confidence 499999999999987544444 789999994222111100001223455778999999999999875432100
Q ss_pred cccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhh
Q 011833 153 TSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232 (476)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (476)
.. ...+|. ..
T Consensus 84 ---------------~~-----------------------------------------------------~~~~~~--~~ 93 (258)
T d2bgra2 84 ---------------HA-----------------------------------------------------INRRLG--TF 93 (258)
T ss_dssp ---------------GG-----------------------------------------------------GTTCTT--SH
T ss_pred ---------------Hh-----------------------------------------------------hhhhhh--hH
Confidence 00 000111 12
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchh
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPI 312 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~ 312 (476)
...|+.++++++.++...+.+++.++|+|+||.+++.++..+| ..+...+..++.........
T Consensus 94 ~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~------------ 156 (258)
T d2bgra2 94 EVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGS-----GVFKCGIAVAPVSRWEYYDS------------ 156 (258)
T ss_dssp HHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTC-----SCCSEEEEESCCCCGGGSBH------------
T ss_pred HHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCC-----CcceEEEEeecccccccccc------------
Confidence 2357778888888776665568999999999999999998876 55556555554332211100
Q ss_pred hhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCC-CCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCC
Q 011833 313 QALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPD-MMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSG 391 (476)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 391 (476)
........... ..+.+.....
T Consensus 157 ----------------------------~~~~~~~~~~~~~~~~~~~~~~------------------------------ 178 (258)
T d2bgra2 157 ----------------------------VYTERYMGLPTPEDNLDHYRNS------------------------------ 178 (258)
T ss_dssp ----------------------------HHHHHHHCCCSTTTTHHHHHHS------------------------------
T ss_pred ----------------------------cccchhcccccchhhHHHhhcc------------------------------
Confidence 00000000000 0011111100
Q ss_pred cccccccCCCC-cccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchhHHHHH
Q 011833 392 TFFYKDHIGKT-NVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIE 468 (476)
Q Consensus 392 ~~~~~~~l~~i-~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~ 468 (476)
.....+.++ ++|+|++||++|.++|++.++++++++... .++++++ |+.+|. +...+..+.+++.+.+
T Consensus 179 --~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~-----~g~~H~--~~~~~~~~~~~~~i~~ 249 (258)
T d2bgra2 179 --TVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY-----TDEDHG--IASSTAHQHIYTHMSH 249 (258)
T ss_dssp --CSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEE-----TTCCTT--CCSHHHHHHHHHHHHH
T ss_pred --cccccccccccCChheeeecCCCcccHHHHHHHHHHHHHCCCCEEEEEE-----CCCCCC--CCCCccHHHHHHHHHH
Confidence 001123344 389999999999999999999999887543 3567777 899993 2234456788999999
Q ss_pred HHHhh
Q 011833 469 FLTRH 473 (476)
Q Consensus 469 fL~~~ 473 (476)
||+++
T Consensus 250 fl~~~ 254 (258)
T d2bgra2 250 FIKQC 254 (258)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99986
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.76 E-value=3.8e-18 Score=164.17 Aligned_cols=183 Identities=15% Similarity=0.215 Sum_probs=134.7
Q ss_pred EEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCC
Q 011833 82 WRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTG 161 (476)
Q Consensus 82 ~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g 161 (476)
..|.|...+.++-|.||++||++++...+ ..+++.|+++||.|+++|++|++.....
T Consensus 40 ~ly~P~~~~~g~~P~Vv~~HG~~g~~~~~-----~~~a~~lA~~Gy~V~~~d~~~~~~~~~~------------------ 96 (260)
T d1jfra_ 40 TIYYPTSTADGTFGAVVISPGFTAYQSSI-----AWLGPRLASQGFVVFTIDTNTTLDQPDS------------------ 96 (260)
T ss_dssp EEEEESCCTTCCEEEEEEECCTTCCGGGT-----TTHHHHHHTTTCEEEEECCSSTTCCHHH------------------
T ss_pred EEEEcCCCCCCCccEEEEECCCCCCHHHH-----HHHHHHHHhCCCEEEEEeeCCCcCCchh------------------
Confidence 34446544344558899999999998887 6899999999999999999987653110
Q ss_pred CcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHH
Q 011833 162 GTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVM 241 (476)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i 241 (476)
...|+.+++
T Consensus 97 -----------------------------------------------------------------------~~~d~~~~~ 105 (260)
T d1jfra_ 97 -----------------------------------------------------------------------RGRQLLSAL 105 (260)
T ss_dssp -----------------------------------------------------------------------HHHHHHHHH
T ss_pred -----------------------------------------------------------------------hHHHHHHHH
Confidence 125677777
Q ss_pred HHHHHHh----CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccC
Q 011833 242 EYIRTLS----KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNV 317 (476)
Q Consensus 242 ~~l~~~~----~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (476)
+++.+.. ..+.++|.++|||+||.+++.++... .+++++|.+++...
T Consensus 106 ~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~------~~~~A~v~~~~~~~----------------------- 156 (260)
T d1jfra_ 106 DYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSR------TSLKAAIPLTGWNT----------------------- 156 (260)
T ss_dssp HHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHC------TTCSEEEEESCCCS-----------------------
T ss_pred HHHHhhhhhhccccccceEEEeccccchHHHHHHhhh------ccchhheeeecccc-----------------------
Confidence 8776642 23346899999999999999999874 56778877655321
Q ss_pred CcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccc
Q 011833 318 PVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKD 397 (476)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 397 (476)
..
T Consensus 157 ------------------------------------------------------------------------------~~ 158 (260)
T d1jfra_ 157 ------------------------------------------------------------------------------DK 158 (260)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ------------------------------------------------------------------------------cc
Confidence 01
Q ss_pred cCCCCcccEEEEeeCCCCcCCHHH-HHHHHHhcCC-CceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 398 HIGKTNVPVLALAADQDLICPTEA-VYETVKLIPE-HLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 398 ~l~~i~vPvLii~G~~D~~vp~~~-~~~~~~~l~~-~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
.+.++++|+|+++|++|.++|++. .+.+++.++. ..+.+.++ ++++|... ......+.+.++.||+++
T Consensus 159 ~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i-----~ga~H~~~---~~~~~~~~~~~~~wl~~~ 228 (260)
T d1jfra_ 159 TWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLEL-----RGASHFTP---NTSDTTIAKYSISWLKRF 228 (260)
T ss_dssp CCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEE-----TTCCTTGG---GSCCHHHHHHHHHHHHHH
T ss_pred cccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEE-----CCCccCCC---CCChHHHHHHHHHHHHHH
Confidence 234578999999999999999865 6667777754 34566666 89999433 344477888999999976
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.76 E-value=2.8e-18 Score=155.87 Aligned_cols=174 Identities=17% Similarity=0.180 Sum_probs=128.0
Q ss_pred CCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchhh
Q 011833 94 NHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKS 173 (476)
Q Consensus 94 ~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (476)
++||||+||++++...| ..+++.|.++||.|+.+|.+|++.+.....
T Consensus 2 ~~PVv~vHG~~~~~~~~-----~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~---------------------------- 48 (179)
T d1ispa_ 2 HNPVVMVHGIGGASFNF-----AGIKSYLVSQGWSRDKLYAVDFWDKTGTNY---------------------------- 48 (179)
T ss_dssp CCCEEEECCTTCCGGGG-----HHHHHHHHHTTCCGGGEEECCCSCTTCCHH----------------------------
T ss_pred CCCEEEECCCCCCHHHH-----HHHHHHHHHcCCeEEEEecCCccccccccc----------------------------
Confidence 47899999999999999 689999999999999999999998744221
Q ss_pred hHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCCC
Q 011833 174 QLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDG 253 (476)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ 253 (476)
. ..+++...++.+.++.+.+
T Consensus 49 ---------------------------------------------------------~-~~~~l~~~i~~~~~~~~~~-- 68 (179)
T d1ispa_ 49 ---------------------------------------------------------N-NGPVLSRFVQKVLDETGAK-- 68 (179)
T ss_dssp ---------------------------------------------------------H-HHHHHHHHHHHHHHHHCCS--
T ss_pred ---------------------------------------------------------h-hhhhHHHHHHHHHHhcCCc--
Confidence 0 1245666777777776654
Q ss_pred cEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhhccCC
Q 011833 254 KLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFA 333 (476)
Q Consensus 254 ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (476)
++++|||||||.++..++.+++ ...+|+++|+++++......
T Consensus 69 ~v~lvGHSmGG~va~~~~~~~~---~~~~V~~~V~l~~p~~g~~~----------------------------------- 110 (179)
T d1ispa_ 69 KVDIVAHSMGGANTLYYIKNLD---GGNKVANVVTLGGANRLTTG----------------------------------- 110 (179)
T ss_dssp CEEEEEETHHHHHHHHHHHHSS---GGGTEEEEEEESCCGGGTCS-----------------------------------
T ss_pred eEEEEeecCcCHHHHHHHHHcC---CchhhCEEEEECCCCCCchh-----------------------------------
Confidence 8999999999999999998764 23679999999987421110
Q ss_pred CCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeCC
Q 011833 334 SSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQ 413 (476)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~ 413 (476)
. ..+ .......+|++.|+|+.
T Consensus 111 ~---------------------------------~l~--------------------------~~~~~~~~~~~~i~~~~ 131 (179)
T d1ispa_ 111 K---------------------------------ALP--------------------------GTDPNQKILYTSIYSSA 131 (179)
T ss_dssp B---------------------------------CCC--------------------------CSCTTCCCEEEEEEETT
T ss_pred h---------------------------------hcC--------------------------CcccccCceEEEEEecC
Confidence 0 000 01122468999999999
Q ss_pred CCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 414 DLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 414 D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
|.++|+..+ .++.. +...+ ++.+|..++ .. .++++.|.+||+..
T Consensus 132 D~~v~~~~~-----~l~~~--~~~~~-----~~~~H~~l~---~~-~~v~~~i~~~L~~~ 175 (179)
T d1ispa_ 132 DMIVMNYLS-----RLDGA--RNVQI-----HGVGHIGLL---YS-SQVNSLIKEGLNGG 175 (179)
T ss_dssp CSSSCHHHH-----CCBTS--EEEEE-----SSCCTGGGG---GC-HHHHHHHHHHHTTT
T ss_pred CcccCchhh-----cCCCc--eEEEE-----CCCCchhhc---cC-HHHHHHHHHHHhcc
Confidence 999998654 35554 33344 789997764 33 57999999999864
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.76 E-value=5.5e-18 Score=157.79 Aligned_cols=46 Identities=15% Similarity=0.141 Sum_probs=40.9
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccc
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~ 143 (476)
++|+||++||++++...| ..+++.|+++||.|+++|+||||.|...
T Consensus 23 ~~~~vl~lHG~~~~~~~~-----~~~~~~la~~G~~V~~~D~~g~g~s~~~ 68 (238)
T d1ufoa_ 23 PKALLLALHGLQGSKEHI-----LALLPGYAERGFLLLAFDAPRHGEREGP 68 (238)
T ss_dssp CCEEEEEECCTTCCHHHH-----HHTSTTTGGGTEEEEECCCTTSTTSSCC
T ss_pred CCeEEEEeCCCCCCHHHH-----HHHHHHHHHCCCEEEEecCCCCCCCccc
Confidence 478999999999999888 5788889999999999999999998653
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.72 E-value=1.7e-16 Score=148.63 Aligned_cols=200 Identities=15% Similarity=0.190 Sum_probs=142.7
Q ss_pred eEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCC---CCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccc
Q 011833 69 YVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGI---GTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVE 145 (476)
Q Consensus 69 ~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~---~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~ 145 (476)
.+. ..+| +|.++..++.. ...+++|++||. +++..+-. ...+++.|.++||.|+.+|+||.|.|.+...
T Consensus 4 ~i~-g~~G-~Le~~~~~~~~---~~~~~~l~~Hp~p~~GG~~~~~~---~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~ 75 (218)
T d2i3da1 4 IFN-GPAG-RLEGRYQPSKE---KSAPIAIILHPHPQFGGTMNNQI---VYQLFYLFQKRGFTTLRFNFRSIGRSQGEFD 75 (218)
T ss_dssp EEE-ETTE-EEEEEEECCSS---TTCCEEEEECCCGGGTCCTTSHH---HHHHHHHHHHTTCEEEEECCTTSTTCCSCCC
T ss_pred EEe-CCCc-cEEEEEeCCCC---CCCCEEEEECCCcCcCCcCCcHH---HHHHHHHHHhcCeeEEEEecCccCCCccccc
Confidence 344 4667 78887664432 246899999985 34432210 0357888999999999999999999965321
Q ss_pred cCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccccc
Q 011833 146 FGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKN 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (476)
T Consensus 76 -------------------------------------------------------------------------------- 75 (218)
T d2i3da1 76 -------------------------------------------------------------------------------- 75 (218)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHh
Q 011833 226 DWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLL 305 (476)
Q Consensus 226 ~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~ 305 (476)
......+|..++++++..+... ..++.++|+|+||.+++.++.+. ..+.++++++++.....
T Consensus 76 ---~~~~e~~d~~aa~~~~~~~~~~-~~~~~~~g~S~G~~~a~~~a~~~------~~~~~~~~~~~~~~~~~-------- 137 (218)
T d2i3da1 76 ---HGAGELSDAASALDWVQSLHPD-SKSCWVAGYSFGAWIGMQLLMRR------PEIEGFMSIAPQPNTYD-------- 137 (218)
T ss_dssp ---SSHHHHHHHHHHHHHHHHHCTT-CCCEEEEEETHHHHHHHHHHHHC------TTEEEEEEESCCTTTSC--------
T ss_pred ---cchhHHHHHHHHHhhhhccccc-ccceeEEeeehHHHHHHHHHHhh------ccccceeeccccccccc--------
Confidence 1122347889999999877543 24799999999999999998774 44667776665432110
Q ss_pred hcCcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCC
Q 011833 306 LPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGG 385 (476)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (476)
T Consensus 138 -------------------------------------------------------------------------------- 137 (218)
T d2i3da1 138 -------------------------------------------------------------------------------- 137 (218)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC---ceeEEEecCCCCCCCcccccccccCCccch
Q 011833 386 LCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH---LVSFKVFGEPRGPHYAHYDLVGSRLAAYQV 462 (476)
Q Consensus 386 ~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~---~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v 462 (476)
...+....+|+|+++|++|.++|...+.++.+.+... ..+++++ ++++|+ +. ...+++
T Consensus 138 ----------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi-----~gAdHf---F~-g~~~~l 198 (218)
T d2i3da1 138 ----------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTL-----PGANHF---FN-GKVDEL 198 (218)
T ss_dssp ----------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEE-----TTCCTT---CT-TCHHHH
T ss_pred ----------hhhccccCCCceeeecccceecChHHHHHHHHHHhhccCCCccEEEe-----CCCCCC---Cc-CCHHHH
Confidence 0123446789999999999999999999998877542 3467777 899993 22 234788
Q ss_pred hHHHHHHHHhh
Q 011833 463 YPCIIEFLTRH 473 (476)
Q Consensus 463 ~~~i~~fL~~~ 473 (476)
.+.|.+||+++
T Consensus 199 ~~~v~~~l~~~ 209 (218)
T d2i3da1 199 MGECEDYLDRR 209 (218)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999986
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.71 E-value=8.7e-17 Score=151.60 Aligned_cols=221 Identities=14% Similarity=0.109 Sum_probs=142.6
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccC
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFG 147 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~ 147 (476)
..+. ..||..+..+.+.|.. ++.|.||++|+..+..... ..+++.|+++||.|+++|+.|.+.........
T Consensus 6 v~~~-~~dg~~~~a~~~~P~~---~~~P~vl~~h~~~G~~~~~-----~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~ 76 (233)
T d1dina_ 6 ISIQ-SYDGHTFGALVGSPAK---APAPVIVIAQEIFGVNAFM-----RETVSWLVDQGYAAVCPDLYARQAPGTALDPQ 76 (233)
T ss_dssp CCEE-CTTSCEECEEEECCSS---SSEEEEEEECCTTBSCHHH-----HHHHHHHHHTTCEEEEECGGGGTSTTCBCCTT
T ss_pred EEEE-cCCCCEEEEEEECCCC---CCceEEEEeCCCCCCCHHH-----HHHHHHHHhcCCcceeeeeccCCCcCcccChH
Confidence 3454 5799999999988864 3678999999765544444 46789999999999999997765542211100
Q ss_pred ccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCC
Q 011833 148 EDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227 (476)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (476)
... ..+.+.+ . ....
T Consensus 77 -------------------~~~-----~~~~~~~---------------------------------~--------~~~~ 91 (233)
T d1dina_ 77 -------------------DER-----QREQAYK---------------------------------L--------WQAF 91 (233)
T ss_dssp -------------------SHH-----HHHHHHH---------------------------------H--------HHTC
T ss_pred -------------------HHH-----HHHHHHH---------------------------------H--------hhhh
Confidence 000 0000000 0 0112
Q ss_pred CchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhc
Q 011833 228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLP 307 (476)
Q Consensus 228 ~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~ 307 (476)
+.+... .|+.++++++.+... ..++|.++|+|+||.+++.++... .+.+.+.+.+...
T Consensus 92 ~~~~~~-~d~~aa~~~l~~~~~-~~~~i~~~G~s~Gg~~a~~~a~~~-------~~~~~~~~~~~~~------------- 149 (233)
T d1dina_ 92 DMEAGV-GDLEAAIRYARHQPY-SNGKVGLVGYCLGGALAFLVAAKG-------YVDRAVGYYGVGL------------- 149 (233)
T ss_dssp CHHHHH-HHHHHHHHHHHTSTT-EEEEEEEEEETHHHHHHHHHHHHT-------CSSEEEEESCSCG-------------
T ss_pred hhHHHH-HHHHHHHHHHHhCCC-CCCceEEEEecccccceeeccccc-------ccceecccccccc-------------
Confidence 333333 789999999976643 346899999999999999988762 2444443221100
Q ss_pred CcchhhhccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCcc
Q 011833 308 LSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLC 387 (476)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (476)
T Consensus 150 -------------------------------------------------------------------------------- 149 (233)
T d1dina_ 150 -------------------------------------------------------------------------------- 149 (233)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCC-CceeEEEecCCCCCCCcccccccc-----cCCccc
Q 011833 388 DRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPE-HLVSFKVFGEPRGPHYAHYDLVGS-----RLAAYQ 461 (476)
Q Consensus 388 ~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~-~~~~~~v~~~~~~~~~gH~~~~~~-----~~~~~~ 461 (476)
..+.+.+.++++|+|+++|++|..+|.+..+.+.+.+.. ...+++++ |+++|.-.... .++.++
T Consensus 150 -----~~~~~~~~~i~~Pvl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y-----~ga~HgF~~~~~~~y~~~aa~~ 219 (233)
T d1dina_ 150 -----EKQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWY-----EEAGHSFARTSSSGYVASAAAL 219 (233)
T ss_dssp -----GGGGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEE-----TTCCTTTTCTTSTTCCHHHHHH
T ss_pred -----ccchhhhhccCCcceeeecccccCCCHHHHHHHHHHHhcCCCEEEEEE-----CCCCcCCCCCCCccCCHHHHHH
Confidence 000123456889999999999999999999988887654 23567776 89999321111 112245
Q ss_pred hhHHHHHHHHhhc
Q 011833 462 VYPCIIEFLTRHD 474 (476)
Q Consensus 462 v~~~i~~fL~~~~ 474 (476)
.|+.+++||.+-+
T Consensus 220 a~~r~~~ffa~~~ 232 (233)
T d1dina_ 220 ANERTLDFLAPLQ 232 (233)
T ss_dssp HHHHHHHHHGGGC
T ss_pred HHHHHHHHHHcCc
Confidence 6899999998753
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.68 E-value=4.3e-16 Score=142.27 Aligned_cols=123 Identities=15% Similarity=0.135 Sum_probs=93.6
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhh
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQA 314 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~ 314 (476)
+++..+++.+.+..+.+..++.++|+|+||.+++.++..+| ..+.+++++++......
T Consensus 77 ~~~~~~i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~-----~~~~~~~~~~~~~~~~~----------------- 134 (202)
T d2h1ia1 77 KELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYE-----NALKGAVLHHPMVPRRG----------------- 134 (202)
T ss_dssp HHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCT-----TSCSEEEEESCCCSCSS-----------------
T ss_pred HHHHHHHHHHHHhccccccceeeecccccchHHHHHHHhcc-----ccccceeeecCCCCccc-----------------
Confidence 56777788888888877789999999999999999999987 77888888776431110
Q ss_pred ccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCccc
Q 011833 315 LNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFF 394 (476)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 394 (476)
T Consensus 135 -------------------------------------------------------------------------------- 134 (202)
T d2h1ia1 135 -------------------------------------------------------------------------------- 134 (202)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCc--eeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 395 YKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHL--VSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 395 ~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
.........|+++++|++|.+||++.++++.+.+.... ++++.+ | .||. . ..+..+.+.+||++
T Consensus 135 -~~~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~-----~-ggH~---~----~~~~~~~~~~wl~k 200 (202)
T d2h1ia1 135 -MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTMHWE-----N-RGHQ---L----TMGEVEKAKEWYDK 200 (202)
T ss_dssp -CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEE-----S-STTS---C----CHHHHHHHHHHHHH
T ss_pred -ccccccccchhhcccccCCCccCHHHHHHHHHHHHHCCCCEEEEEE-----C-CCCc---C----CHHHHHHHHHHHHH
Confidence 01223357899999999999999999999998887654 455655 5 4892 1 25668899999987
Q ss_pred h
Q 011833 473 H 473 (476)
Q Consensus 473 ~ 473 (476)
.
T Consensus 201 ~ 201 (202)
T d2h1ia1 201 A 201 (202)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.67 E-value=1.1e-16 Score=147.24 Aligned_cols=67 Identities=13% Similarity=0.073 Sum_probs=48.4
Q ss_pred cCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 398 HIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 398 ~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
...++++|+++|+|++|..++.+. ....+..+. .++++++ + ++|+.++ ..+..+++.+.|.+||+++
T Consensus 163 ~~~~i~~p~l~i~g~~D~~~~~~~-~~w~~~~~~-~~~~~~i-----~-g~H~~ml-~~~~~~~va~~I~~~L~~~ 229 (230)
T d1jmkc_ 163 STGQVKADIDLLTSGADFDIPEWL-ASWEEATTG-AYRMKRG-----F-GTHAEML-QGETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp CCSCBSSEEEEEECSSCCCCCTTE-ECSGGGBSS-CEEEEEC-----S-SCGGGTT-SHHHHHHHHHHHHHHHTCB
T ss_pred ccccccCcceeeeecCCcccchhH-HHHHHhccC-CcEEEEE-----c-CCChhhc-CCccHHHHHHHHHHHHhhc
Confidence 456789999999999999998653 334455544 3567665 4 6997653 2223488999999999875
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=9.8e-17 Score=149.08 Aligned_cols=96 Identities=20% Similarity=0.234 Sum_probs=67.0
Q ss_pred CCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccch
Q 011833 92 QRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQS 171 (476)
Q Consensus 92 ~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 171 (476)
+.++||||+||+++++..| ..+++.| +++|+++|+||+|.|+..
T Consensus 23 ~~~~Pl~l~Hg~~gs~~~~-----~~l~~~L---~~~v~~~d~~g~~~~~~~---------------------------- 66 (286)
T d1xkta_ 23 SSERPLFLVHPIEGSTTVF-----HSLASRL---SIPTYGLQCTRAAPLDSI---------------------------- 66 (286)
T ss_dssp CCSCCEEEECCTTCCCGGG-----HHHHHTC---SSCEEEECCCTTSCCSCH----------------------------
T ss_pred CCCCeEEEECCCCccHHHH-----HHHHHHc---CCeEEEEeCCCCCCCCCH----------------------------
Confidence 3567899999999999888 5677666 689999999999987421
Q ss_pred hhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCC
Q 011833 172 KSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPK 251 (476)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~ 251 (476)
++++ .| .++.+++..+.
T Consensus 67 ----------------------------------------------------------~~~a-~~---~~~~~~~~~~~- 83 (286)
T d1xkta_ 67 ----------------------------------------------------------HSLA-AY---YIDCIRQVQPE- 83 (286)
T ss_dssp ----------------------------------------------------------HHHH-HH---HHHHHHHHCCS-
T ss_pred ----------------------------------------------------------HHHH-HH---HHHHHHHhcCC-
Confidence 1112 22 23344444433
Q ss_pred CCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 252 DGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 252 ~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
++++++||||||.+++.+|.++| +++.+++.+...
T Consensus 84 -~~~~lvGhS~Gg~vA~~~A~~~p-----~~~~~v~~l~~~ 118 (286)
T d1xkta_ 84 -GPYRVAGYSYGACVAFEMCSQLQ-----AQQSPAPTHNSL 118 (286)
T ss_dssp -SCCEEEEETHHHHHHHHHHHHHH-----HC------CCEE
T ss_pred -CceEEeecCCccHHHHHHHHHHH-----HcCCCceeEEEe
Confidence 48999999999999999999988 777777766643
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.65 E-value=5.2e-18 Score=162.98 Aligned_cols=51 Identities=22% Similarity=0.575 Sum_probs=43.4
Q ss_pred CCCcEEEecCCCCCcceeecCC--CCCHHHHHHhCCCcEEEecCCCCCCcccc
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSP--EYSFARYMSGQGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~--~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~ 143 (476)
+++||||+||++.++..|...+ ...++.+++++||+|+++|+||||.|...
T Consensus 57 ~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~ 109 (318)
T d1qlwa_ 57 KRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATD 109 (318)
T ss_dssp CSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCC
T ss_pred CCCcEEEECCCCCCcCccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCc
Confidence 4688999999999999996422 35689999999999999999999999653
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.65 E-value=2.1e-16 Score=153.69 Aligned_cols=224 Identities=14% Similarity=0.097 Sum_probs=133.6
Q ss_pred CCCCcEEEecCCC--CCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCccccccc
Q 011833 92 QRNHPLLLLSGIG--TNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRES 169 (476)
Q Consensus 92 ~~~~~VlllHG~~--~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 169 (476)
..++++|++||+. ++...| ..+++.|.. ++.||++|++|+|.|.......
T Consensus 58 ~~~~~l~c~~~~~~~g~~~~y-----~~la~~L~~-~~~V~al~~pG~~~~~~~~~~~---------------------- 109 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGPHEF-----LRLSTSFQE-ERDFLAVPLPGYGTGTGTGTAL---------------------- 109 (283)
T ss_dssp CCCCEEEEECCCCTTCSTTTT-----HHHHHTTTT-TCCEEEECCTTCCBC---CBCC----------------------
T ss_pred CCCceEEEeCCCCCCCCHHHH-----HHHHHhcCC-CceEEEEeCCCCCCCCCCcccc----------------------
Confidence 3568999999963 455566 578888875 5999999999999886533200
Q ss_pred chhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhC
Q 011833 170 QSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSK 249 (476)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~ 249 (476)
...++++++ ...++.|+...+
T Consensus 110 -------------------------------------------------------~~~s~~~~a----~~~~~~i~~~~~ 130 (283)
T d2h7xa1 110 -------------------------------------------------------LPADLDTAL----DAQARAILRAAG 130 (283)
T ss_dssp -------------------------------------------------------EESSHHHHH----HHHHHHHHHHHT
T ss_pred -------------------------------------------------------ccCCHHHHH----HHHHHHHHHhcC
Confidence 001233333 223455555554
Q ss_pred CCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhhccCCcCChHHHHHhh
Q 011833 250 PKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQALNVPVIPLGTFLAAI 329 (476)
Q Consensus 250 ~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (476)
. ++++++||||||.+++.+|.+.+-. ....|.++|++++........ ..... ....
T Consensus 131 ~--~P~vL~GhS~GG~vA~e~A~~l~~~-~g~~v~~LvL~d~~~~~~~~~--~~~~~----------------~~~~--- 186 (283)
T d2h7xa1 131 D--APVVLLGHSGGALLAHELAFRLERA-HGAPPAGIVLVDPYPPGHQEP--IEVWS----------------RQLG--- 186 (283)
T ss_dssp T--SCEEEEEETHHHHHHHHHHHHHHHH-HSCCCSEEEEESCCCTTCCHH--HHHTH----------------HHHH---
T ss_pred C--CceEEEEeccchHHHHHHHHhhHHH-cCCCceEEEEecCCccccccc--hhhhh----------------hhhH---
Confidence 3 4899999999999999999865300 025799999998754322211 00000 0000
Q ss_pred ccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCcccccccCCCCcccEEEE
Q 011833 330 HPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLAL 409 (476)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii 409 (476)
..+ .......++.+.+... ..+..++. ......+++|+++|
T Consensus 187 -----------~~~--~~~~~~~~~~~~l~a~-------------~~~~~~~~-------------~~~~~~~~~Pvl~i 227 (283)
T d2h7xa1 187 -----------EGL--FAGELEPMSDARLLAM-------------GRYARFLA-------------GPRPGRSSAPVLLV 227 (283)
T ss_dssp -----------HHH--HHTCSSCCCHHHHHHH-------------HHHHHHHH-------------SCCCCCCCSCEEEE
T ss_pred -----------HHh--hcccccccccHHHHHH-------------HHHHHHHh-------------hccccccCCCeEEE
Confidence 000 0001111222211111 11111111 11356789999999
Q ss_pred eeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhhc
Q 011833 410 AADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHD 474 (476)
Q Consensus 410 ~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~~ 474 (476)
+|++|..++++....+.+.++.. .+++++ + .+|+.++ .+.++.+.+.|.+||++-|
T Consensus 228 ~g~~d~~~~~~~~~~w~~~~~~~-~~~~~v-----~-G~H~~ml--~e~~~~vA~~i~~~L~~ld 283 (283)
T d2h7xa1 228 RASEPLGDWQEERGDWRAHWDLP-HTVADV-----P-GDHFTMM--RDHAPAVAEAVLSWLDAIE 283 (283)
T ss_dssp EESSCSSCCCGGGCCCSCCCSSC-SEEEEE-----S-SCTTHHH--HTTHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCCCHHHHHHHHHhCCCC-cEEEEE-----c-CCCcccc--cCCHHHHHHHHHHHHHhcC
Confidence 99999999988877776666653 466666 5 4897654 3567899999999998743
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=2.2e-15 Score=141.63 Aligned_cols=128 Identities=22% Similarity=0.251 Sum_probs=89.5
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhh
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQA 314 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~ 314 (476)
+.+..+++...+ .+.+.++++++|+||||.+++.++.++| .++++++.+++.......
T Consensus 94 ~~l~~li~~~~~-~~i~~~ri~l~GfS~Gg~~a~~~~~~~~-----~~~~gvi~~sg~lp~~~~---------------- 151 (229)
T d1fj2a_ 94 ENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQ-----QKLAGVTALSCWLPLRAS---------------- 151 (229)
T ss_dssp HHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCS-----SCCSEEEEESCCCTTGGG----------------
T ss_pred HHHHHHhhhhhh-cCCCccceeeeecccchHHHHHHHHhhc-----cccCcccccccccccccc----------------
Confidence 344555555443 3556679999999999999999999887 889999988764311000
Q ss_pred ccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCccc
Q 011833 315 LNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFF 394 (476)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 394 (476)
+ .+ .
T Consensus 152 -----------------~-----------------~~-----------------~------------------------- 155 (229)
T d1fj2a_ 152 -----------------F-----------------PQ-----------------G------------------------- 155 (229)
T ss_dssp -----------------S-----------------CS-----------------S-------------------------
T ss_pred -----------------c-----------------cc-----------------c-------------------------
Confidence 0 00 0
Q ss_pred ccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcC----CCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHH
Q 011833 395 YKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIP----EHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFL 470 (476)
Q Consensus 395 ~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~----~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL 470 (476)
.....+.++|+|++||++|.++|.+.+++.++.+. ..+++++++ ++.||. . ..+..+.+.+||
T Consensus 156 -~~~~~~~~~Pvli~hG~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~-----~g~gH~---i----~~~~~~~~~~wL 222 (229)
T d1fj2a_ 156 -PIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTY-----EGMMHS---S----CQQEMMDVKQFI 222 (229)
T ss_dssp -CCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEE-----TTCCSS---C----CHHHHHHHHHHH
T ss_pred -ccccccccCceeEEEcCCCCeeCHHHHHHHHHHHHhcCCCCceEEEEe-----CCCCCc---c----CHHHHHHHHHHH
Confidence 00112346899999999999999998887776653 346788887 889992 1 245578899999
Q ss_pred Hhh
Q 011833 471 TRH 473 (476)
Q Consensus 471 ~~~ 473 (476)
+++
T Consensus 223 ~~~ 225 (229)
T d1fj2a_ 223 DKL 225 (229)
T ss_dssp HHH
T ss_pred HhH
Confidence 875
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.59 E-value=4e-14 Score=143.23 Aligned_cols=68 Identities=21% Similarity=0.269 Sum_probs=57.4
Q ss_pred cccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 396 KDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 396 ~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
.+.+++|++|+|+|.++.|.++|++..+++.+.++++ ++.+| + -..||..|+ ...+.+.+.|.+||++
T Consensus 309 ~~aL~~I~a~~LvI~~~sD~lFPp~~~~e~a~~l~~a--~~~~I---~-S~~GHDaFL---~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 309 PEALAMITQPALIICARSDGLYSFDEHVEMGRSIPNS--RLCVV---D-TNEGHDFFV---MEADKVNDAVRGFLDQ 376 (376)
T ss_dssp HHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHSTTE--EEEEC---C-CSCGGGHHH---HTHHHHHHHHHHHHTC
T ss_pred HHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHhcCCC--eEEEE---C-CCCCccccc---cCHHHHHHHHHHHHcC
Confidence 4468999999999999999999999999999999975 77777 2 268998774 2368899999999975
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.59 E-value=8.7e-15 Score=133.72 Aligned_cols=121 Identities=18% Similarity=0.243 Sum_probs=86.8
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHHHhhcCcchhhh
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQA 314 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~ 314 (476)
+++..+++......+. ++++++|||+||.+++.++..+| ..+.+++++++.......
T Consensus 80 ~~~~~~l~~~~~~~~~--~~v~l~G~S~Gg~~a~~~a~~~p-----~~~~~~~~~~~~~~~~~~---------------- 136 (203)
T d2r8ba1 80 GKMADFIKANREHYQA--GPVIGLGFSNGANILANVLIEQP-----ELFDAAVLMHPLIPFEPK---------------- 136 (203)
T ss_dssp HHHHHHHHHHHHHHTC--CSEEEEEETHHHHHHHHHHHHST-----TTCSEEEEESCCCCSCCC----------------
T ss_pred HHHHHHHHHhhhcCCC--ceEEEEEecCHHHHHHHHHHhhh-----hcccceeeeccccccccc----------------
Confidence 4445555555444444 48999999999999999999987 667888887764321100
Q ss_pred ccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCccc
Q 011833 315 LNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFF 394 (476)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 394 (476)
T Consensus 137 -------------------------------------------------------------------------------- 136 (203)
T d2r8ba1 137 -------------------------------------------------------------------------------- 136 (203)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHh
Q 011833 395 YKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 395 ~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~ 472 (476)
........|++++||++|.++|++.++++.+.+... +++++++ + .||- + +.+..+.+.+||.+
T Consensus 137 --~~~~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~-----~-ggH~-~------~~~~~~~~~~wl~~ 201 (203)
T d2r8ba1 137 --ISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWH-----P-GGHE-I------RSGEIDAVRGFLAA 201 (203)
T ss_dssp --CCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEE-----S-SCSS-C------CHHHHHHHHHHHGG
T ss_pred --cccccccchhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEEEE-----C-CCCc-C------CHHHHHHHHHHHHh
Confidence 011234679999999999999999999999988644 4567776 4 4792 1 24567889999998
Q ss_pred h
Q 011833 473 H 473 (476)
Q Consensus 473 ~ 473 (476)
|
T Consensus 202 ~ 202 (203)
T d2r8ba1 202 Y 202 (203)
T ss_dssp G
T ss_pred c
Confidence 7
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.59 E-value=9.1e-14 Score=139.65 Aligned_cols=226 Identities=12% Similarity=0.094 Sum_probs=122.7
Q ss_pred hhhhccHHHHHHHHHHHhCCCCCcE-eEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhhHH-Hhh--
Q 011833 231 HYLEEDVPAVMEYIRTLSKPKDGKL-LAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSLLR-LLL-- 306 (476)
Q Consensus 231 ~~~~~Dl~a~i~~l~~~~~~~~~ki-~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~~~-~~~-- 306 (476)
.+...|+..+...|.++.++. ++ .+||.||||++++.++..|| +.|+++|.+++............ ...
T Consensus 113 ~iti~D~v~aq~~Ll~~LGI~--~l~~viG~SmGGmqAl~wa~~~P-----d~v~~~i~i~~~a~~s~~~~~~~~~~~~a 185 (357)
T d2b61a1 113 NIVVQDIVKVQKALLEHLGIS--HLKAIIGGSFGGMQANQWAIDYP-----DFMDNIVNLCSSIYFSAEAIGFNHVMRQA 185 (357)
T ss_dssp CCCHHHHHHHHHHHHHHTTCC--CEEEEEEETHHHHHHHHHHHHST-----TSEEEEEEESCCSSCCHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhCcc--eEEEEecccHHHHHHHHHHHhhh-----HHHhhhcccccccccchhHHHHHHHHHHH
Confidence 334567777777788888886 87 77799999999999999999 89999999998654433221111 110
Q ss_pred cCcchhh---hccCCcCChHH-HHHhhccC--CCCchHHHHHHHHhhcCCC-----CCCHHHHHHHhhhc-cCCCCHHHH
Q 011833 307 PLSDPIQ---ALNVPVIPLGT-FLAAIHPF--ASSPPYVLSWLKFLISAPD-----MMHPELFEKLIFSN-FGNIPTKLI 374 (476)
Q Consensus 307 ~~~~~~~---~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~ 374 (476)
-..++.. .+.-...|... .++.+... ................... ...-+.+-.+.... .....+..+
T Consensus 186 I~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~rfDan~y 265 (357)
T d2b61a1 186 VINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSY 265 (357)
T ss_dssp HHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHhhCCHHHH
Confidence 0111111 01001111111 11111110 0111111111110000000 00011111111111 112233333
Q ss_pred HHHHHHHHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCccccc
Q 011833 375 SQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDL 452 (476)
Q Consensus 375 ~~~~~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~ 452 (476)
..+.+......... +.-...+.+++|++|+|+|..+.|.+.|++..+++.+.+++. +++++++ + -..||..+
T Consensus 266 l~l~~a~~~~D~~~--~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I---~-S~~GHdaf 339 (357)
T d2b61a1 266 LHLLRALDMYDPSL--GYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEF---P-SDYGHDAF 339 (357)
T ss_dssp HHHHHHHHHCCTTT--TSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEE---C-CTTGGGHH
T ss_pred HHHHHHhhhccccc--ccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEE---C-CCCCcccc
Confidence 33333333333221 122345579999999999999999999999999999988754 3577777 2 26799887
Q ss_pred ccccCCccchhHHHHHHHHh
Q 011833 453 VGSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 453 ~~~~~~~~~v~~~i~~fL~~ 472 (476)
+. ..+++.+.|.+||+.
T Consensus 340 L~---e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 340 LV---DYDQFEKRIRDGLAG 356 (357)
T ss_dssp HH---CHHHHHHHHHHHHHT
T ss_pred Cc---CHHHHHHHHHHHHcc
Confidence 52 357888999999975
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.57 E-value=6.2e-15 Score=141.97 Aligned_cols=198 Identities=12% Similarity=0.096 Sum_probs=129.8
Q ss_pred EEEEEEcCCCCCCCCCCcEEEecCCC---CCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCcccccccc
Q 011833 79 LALWRYLPSPAAPQRNHPLLLLSGIG---TNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSA 155 (476)
Q Consensus 79 L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~ 155 (476)
..+..|.|... +.|+||++||.+ ++...| ..++..|+++||.|+++|+|..+...
T Consensus 50 ~~lDiy~P~~~---~~P~vv~iHGG~w~~g~~~~~-----~~~a~~l~~~G~~Vv~~~YRl~p~~~-------------- 107 (261)
T d2pbla1 50 HKFDLFLPEGT---PVGLFVFVHGGYWMAFDKSSW-----SHLAVGALSKGWAVAMPSYELCPEVR-------------- 107 (261)
T ss_dssp CEEEEECCSSS---CSEEEEEECCSTTTSCCGGGC-----GGGGHHHHHTTEEEEEECCCCTTTSC--------------
T ss_pred eEEEEeccCCC---CCCeEEEECCCCCccCChhHh-----hhHHHHHhcCCceeeccccccccccc--------------
Confidence 34445666543 579999999953 333444 46789999999999999999765431
Q ss_pred ccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhc
Q 011833 156 NAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEE 235 (476)
Q Consensus 156 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (476)
+.+. .+
T Consensus 108 -------------------------------------------------------------------------~p~~-~~ 113 (261)
T d2pbla1 108 -------------------------------------------------------------------------ISEI-TQ 113 (261)
T ss_dssp -------------------------------------------------------------------------HHHH-HH
T ss_pred -------------------------------------------------------------------------Cchh-HH
Confidence 2222 37
Q ss_pred cHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCC-CCCcccccEEEEecccccccCChhhHHHhhcCcchhhh
Q 011833 236 DVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGF-EGKDSGFASVTTLASSLDYRPSNSLLRLLLPLSDPIQA 314 (476)
Q Consensus 236 Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~-~~~~~~v~~lvlla~~~~~~~~~~~~~~~~~~~~~~~~ 314 (476)
|+.+++++++++.. ++|.++|||.||.++..++..... ......+++++.+++..+.....
T Consensus 114 d~~~a~~~~~~~~~---~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 175 (261)
T d2pbla1 114 QISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLL--------------- 175 (261)
T ss_dssp HHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGG---------------
T ss_pred HHHHHHHHHHhccc---CceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhh---------------
Confidence 99999999988753 489999999999998776654321 11124578888888876543210
Q ss_pred ccCCcCChHHHHHhhccCCCCchHHHHHHHHhhcCCCCCCHHHHHHHhhhccCCCCHHHHHHHHHHHHhCCccccCCccc
Q 011833 315 LNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFF 394 (476)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 394 (476)
. .+....+ ..+++...+. ..
T Consensus 176 ---------------~----------~~~~~~~----~~~~~~~~~~----------------------SP--------- 195 (261)
T d2pbla1 176 ---------------R----------TSMNEKF----KMDADAAIAE----------------------SP--------- 195 (261)
T ss_dssp ---------------G----------STTHHHH----CCCHHHHHHT----------------------CG---------
T ss_pred ---------------h----------hhhcccc----cCCHHHHHHh----------------------Cc---------
Confidence 0 0000000 0122221111 00
Q ss_pred ccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCc
Q 011833 395 YKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAA 459 (476)
Q Consensus 395 ~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~ 459 (476)
...+.+...|+++++|++|..++.++++++.++++. ..+++ ++..|++.+.....+
T Consensus 196 -~~~~~~~~~P~li~~G~~D~~~~~~qs~~~~~~l~~---~~~~~-----~~~~HF~vi~~l~~~ 251 (261)
T d2pbla1 196 -VEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWDA---DHVIA-----FEKHHFNVIEPLADP 251 (261)
T ss_dssp -GGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHTC---EEEEE-----TTCCTTTTTGGGGCT
T ss_pred -hhhcccCCCeEEEEEecCCCchHHHHHHHHHHHhCC---CceEe-----CCCCchhHHHhhcCC
Confidence 124566789999999999999888999999999864 45555 889998876554443
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.56 E-value=1.2e-14 Score=134.35 Aligned_cols=53 Identities=11% Similarity=-0.028 Sum_probs=45.0
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
+++..+|+.+.++.+.+.++++++||||||.+++.++.++| ..+++++++++.
T Consensus 86 ~~l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p-----~~~~~~v~~~g~ 138 (209)
T d3b5ea1 86 AAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHP-----GIVRLAALLRPM 138 (209)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHST-----TSCSEEEEESCC
T ss_pred HHHHHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCC-----CcceEEEEeCCc
Confidence 45666777777777777789999999999999999999987 789999988864
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.56 E-value=8.1e-14 Score=140.26 Aligned_cols=223 Identities=14% Similarity=0.069 Sum_probs=124.2
Q ss_pred hhccHHHHHHHHHHHhCCCCCcE-eEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccCChhh-HHHhhc--C
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKL-LAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNSL-LRLLLP--L 308 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki-~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~~~~~-~~~~~~--~ 308 (476)
...|+.++-..+.++.++. ++ .+||.||||+.++.+|..|| ..|+++|.+++.......... ...... .
T Consensus 122 t~~D~v~~~~~ll~~LGI~--~l~~viG~SmGGmqAl~wA~~yP-----d~v~~~v~ia~sa~~s~~~~~~~~~~~~aI~ 194 (362)
T d2pl5a1 122 SIQDMVKAQKLLVESLGIE--KLFCVAGGSMGGMQALEWSIAYP-----NSLSNCIVMASTAEHSAMQIAFNEVGRQAIL 194 (362)
T ss_dssp CHHHHHHHHHHHHHHTTCS--SEEEEEEETHHHHHHHHHHHHST-----TSEEEEEEESCCSBCCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCcC--eeEEEeehhHHHHHHHHHHHhCc-----hHhhhhcccccccccCHHHHHHHHHHHHHHh
Confidence 3467777778888888886 77 48899999999999999999 899999999976644332211 111110 0
Q ss_pred cchhhhc--cCCcCChHHH-HHhhc--cCCCCchHHHHHHHHhhcCCCCC-CHHHHHHHhhh----ccCCCCHHHHHHHH
Q 011833 309 SDPIQAL--NVPVIPLGTF-LAAIH--PFASSPPYVLSWLKFLISAPDMM-HPELFEKLIFS----NFGNIPTKLISQLT 378 (476)
Q Consensus 309 ~~~~~~~--~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~ 378 (476)
.++...- ..+.-|...+ ++.+. ............+.......... .....+.+... ......+..+..+.
T Consensus 195 ~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~k~~~rfDan~yl~l~ 274 (362)
T d2pl5a1 195 SDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVT 274 (362)
T ss_dssp TSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHH
T ss_pred cCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 1111000 0011121111 11111 11111111111111111000000 00000011111 01122333333344
Q ss_pred HHHHhCCccccCCcccccccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCccccccccc
Q 011833 379 TVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSR 456 (476)
Q Consensus 379 ~~~~~~~~~~~~g~~~~~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~ 456 (476)
+......... ...+.+.+++|++|+|+|..+.|.++|++..+++.+.+++. ++++++|. -.+||.+++
T Consensus 275 ~a~~~~Di~~---~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~----S~~GHdaFL--- 344 (362)
T d2pl5a1 275 KALDHYSLGK---GKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQ----SGEGHDSFL--- 344 (362)
T ss_dssp HHHHHCBCCS---HHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEEC----CCBSSGGGG---
T ss_pred hhhhcccccc---cccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEEeC----CCCCcchhc---
Confidence 4444333321 12345679999999999999999999999999999999865 34666662 478998874
Q ss_pred CCccchhHHHHHHHHh
Q 011833 457 LAAYQVYPCIIEFLTR 472 (476)
Q Consensus 457 ~~~~~v~~~i~~fL~~ 472 (476)
...+++.+.|.+||++
T Consensus 345 ~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 345 LKNPKQIEILKGFLEN 360 (362)
T ss_dssp SCCHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHcC
Confidence 3457899999999974
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.55 E-value=1.2e-14 Score=143.91 Aligned_cols=104 Identities=18% Similarity=0.175 Sum_probs=85.3
Q ss_pred CCCcEEEecCCCCCcce--eecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccc
Q 011833 93 RNHPLLLLSGIGTNAIG--YDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQ 170 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~--~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 170 (476)
.++||||+||++++... | ..++++|+++||+|+.+|++|+|.++...
T Consensus 30 ~~~PVvlvHG~~~~~~~~~~-----~~~~~~L~~~Gy~v~~~d~~g~g~~d~~~-------------------------- 78 (317)
T d1tcaa_ 30 VSKPILLVPGTGTTGPQSFD-----SNWIPLSTQLGYTPCWISPPPFMLNDTQV-------------------------- 78 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHT-----TTHHHHHHTTTCEEEEECCTTTTCSCHHH--------------------------
T ss_pred CCCcEEEECCCCCCCcchhH-----HHHHHHHHhCCCeEEEecCCCCCCCchHh--------------------------
Confidence 45789999999887654 4 57999999999999999999999864311
Q ss_pred hhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCC
Q 011833 171 SKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKP 250 (476)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~ 250 (476)
..+++.+.|+++.+..+.
T Consensus 79 --------------------------------------------------------------sae~la~~i~~v~~~~g~ 96 (317)
T d1tcaa_ 79 --------------------------------------------------------------NTEYMVNAITALYAGSGN 96 (317)
T ss_dssp --------------------------------------------------------------HHHHHHHHHHHHHHHTTS
T ss_pred --------------------------------------------------------------HHHHHHHHHHHHHHhccC
Confidence 136788889999888876
Q ss_pred CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 251 KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 251 ~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
+ |+.+|||||||.++..++..+|-. ..+|..+|.++++.
T Consensus 97 ~--kV~lVGhS~GG~~a~~~l~~~p~~--~~~V~~~v~i~~~~ 135 (317)
T d1tcaa_ 97 N--KLPVLTWSQGGLVAQWGLTFFPSI--RSKVDRLMAFAPDY 135 (317)
T ss_dssp C--CEEEEEETHHHHHHHHHHHHCGGG--TTTEEEEEEESCCT
T ss_pred C--ceEEEEeCchHHHHHHHHHHCCCc--chheeEEEEeCCCC
Confidence 5 999999999999999999988711 25699999999875
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.55 E-value=8.4e-15 Score=138.08 Aligned_cols=61 Identities=8% Similarity=0.042 Sum_probs=45.0
Q ss_pred CCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCc--eeEEEecCCCCCCCcccccccccCCccchhHHHHH
Q 011833 399 IGKTNVPVLALAADQDLICPTEAVYETVKLIPEHL--VSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIE 468 (476)
Q Consensus 399 l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~ 468 (476)
+.++.+|+|+++|++|.++|.+.+.++.+.+...+ ++++++ ++.+|.... + .+++.+.|++
T Consensus 198 ~~~~~~P~lii~G~~D~~vp~~~s~~l~~~L~~~g~~~~~~~~-----~~~~H~~~~---~-~~~~~~~i~~ 260 (263)
T d1vkha_ 198 LSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLD-----DLGLHNDVY---K-NGKVAKYIFD 260 (263)
T ss_dssp HHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEE-----CCCSGGGGG---G-CHHHHHHHHH
T ss_pred ccccCCCeeeeecCCCcccCHHHHHHHHHHHHHCCCCEEEEEE-----CCCCchhhh---c-ChHHHHHHHH
Confidence 44578999999999999999999999999886543 456666 889995432 1 2445555543
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.54 E-value=2e-14 Score=142.19 Aligned_cols=134 Identities=18% Similarity=0.142 Sum_probs=100.2
Q ss_pred eeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcc-eeecCCCCCHHHHHHhCCCcEEEecCCCCCCccccccc
Q 011833 68 HYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAI-GYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEF 146 (476)
Q Consensus 68 ~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~-~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~ 146 (476)
..|. ..||.+|.+..|.|... ++-|+||+.||.+.... .+. .....++.|+++||.|+++|.||.|.|.+....
T Consensus 8 v~ip-mrDGv~L~~~vy~P~~~--~~~P~il~~~pyg~~~~~~~~--~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~~ 82 (347)
T d1ju3a2 8 VMVP-MRDGVRLAVDLYRPDAD--GPVPVLLVRNPYDKFDVFAWS--TQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVP 82 (347)
T ss_dssp EEEE-CTTSCEEEEEEEEECCS--SCEEEEEEEESSCTTCCHHHH--TTSCCTHHHHHTTCEEEEEECTTSTTCCSCCCT
T ss_pred eEEE-CCCCCEEEEEEEEcCCC--CCEEEEEEEcCCCCccccCcC--cccHHHHHHHHCCCEEEEEeeCCccccCCcccc
Confidence 3565 58999999999999753 45688899999865321 111 113457789999999999999999999763320
Q ss_pred CccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccC
Q 011833 147 GEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKND 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
T Consensus 83 -------------------------------------------------------------------------------- 82 (347)
T d1ju3a2 83 -------------------------------------------------------------------------------- 82 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
......|..++++++.++.-. +++|.++|+|+||.+++.+|+..| ..+++++...+..+.
T Consensus 83 ---~~~~~~d~~d~i~w~~~q~~~-~grVg~~G~SygG~~~~~~A~~~~-----~~l~aiv~~~~~~d~ 142 (347)
T d1ju3a2 83 ---HVDDEADAEDTLSWILEQAWC-DGNVGMFGVSYLGVTQWQAAVSGV-----GGLKAIAPSMASADL 142 (347)
T ss_dssp ---TTTHHHHHHHHHHHHHHSTTE-EEEEEECEETHHHHHHHHHHTTCC-----TTEEEBCEESCCSCT
T ss_pred ---ccchhhhHHHHHHHHHhhccC-CcceEeeeccccccchhhhhhccc-----ccceeeeeccccchh
Confidence 000125778889999877544 369999999999999999998866 778899988887654
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.50 E-value=3.3e-14 Score=140.47 Aligned_cols=107 Identities=18% Similarity=0.231 Sum_probs=83.4
Q ss_pred CCCcEEEecCCCCCcceee-cCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccch
Q 011833 93 RNHPLLLLSGIGTNAIGYD-LSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQS 171 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~-~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 171 (476)
.+.||||+||++++...|. ......+.+.|.++||+|+++|+||+|.|+....
T Consensus 7 ~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~~-------------------------- 60 (319)
T d1cvla_ 7 TRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNG-------------------------- 60 (319)
T ss_dssp CSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTTS--------------------------
T ss_pred CCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc--------------------------
Confidence 4678999999988776532 1122689999999999999999999998854221
Q ss_pred hhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCC
Q 011833 172 KSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPK 251 (476)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~ 251 (476)
..+++.+.|+.+.+..+.+
T Consensus 61 -------------------------------------------------------------~~~~l~~~i~~~~~~~~~~ 79 (319)
T d1cvla_ 61 -------------------------------------------------------------RGEQLLAYVKQVLAATGAT 79 (319)
T ss_dssp -------------------------------------------------------------HHHHHHHHHHHHHHHHCCS
T ss_pred -------------------------------------------------------------cHHHHHHHHHHHHHHhCCC
Confidence 0145555566666666654
Q ss_pred CCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 252 DGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 252 ~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
++++|||||||.++..++.++| ++|+++|+++++.
T Consensus 80 --~v~lvGhS~GG~~~~~~~~~~p-----~~v~~vv~i~~p~ 114 (319)
T d1cvla_ 80 --KVNLIGHSQGGLTSRYVAAVAP-----QLVASVTTIGTPH 114 (319)
T ss_dssp --CEEEEEETTHHHHHHHHHHHCG-----GGEEEEEEESCCT
T ss_pred --CEEEEeccccHHHHHHHHHHCc-----cccceEEEECCCC
Confidence 9999999999999999999988 8999999999864
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.50 E-value=2e-13 Score=138.04 Aligned_cols=150 Identities=15% Similarity=0.118 Sum_probs=105.1
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcce---ee---cCCCCCHHHHHHhCCCcEEEecCCCCCC
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIG---YD---LSPEYSFARYMSGQGFDTWILEVRGAGL 139 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~---~~---~~~~~~l~~~L~~~Gy~V~~~D~rG~G~ 139 (476)
..++|. ..||.+|....|.|... ++-|+||+.|+.+..... .. ........++|+++||.|+.+|.||+|.
T Consensus 25 ~~v~i~-~rDG~~L~~~v~~P~~~--~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~ 101 (381)
T d1mpxa2 25 REVMIP-MRDGVKLHTVIVLPKGA--KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYG 101 (381)
T ss_dssp EEEEEE-CTTSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTT
T ss_pred EEEEEE-CCCCCEEEEEEEEeCCC--CCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCC
Confidence 345676 68999999999999754 456788888887532111 00 0112356788999999999999999999
Q ss_pred cccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhh
Q 011833 140 SAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQL 219 (476)
Q Consensus 140 S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (476)
|.+..... .... +
T Consensus 102 S~G~~~~~-------------------~~~~----------------------~-------------------------- 114 (381)
T d1mpxa2 102 SEGDYVMT-------------------RPLR----------------------G-------------------------- 114 (381)
T ss_dssp CCSCCCTT-------------------CCCS----------------------B--------------------------
T ss_pred CCCceecc-------------------chhh----------------------h--------------------------
Confidence 97643200 0000 0
Q ss_pred hcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 220 DLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 220 ~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
....+..++ .+|+.++|+++.++.....++|.++|+|+||.+++.+|+..| ..++++|..++..+.
T Consensus 115 ---~~~~~~~~~--~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~-----~~l~a~v~~~~~~d~ 180 (381)
T d1mpxa2 115 ---PLNPSEVDH--ATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPH-----PALKVAVPESPMIDG 180 (381)
T ss_dssp ---TTBCSSCCH--HHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCC-----TTEEEEEEESCCCCT
T ss_pred ---hcccchhHH--HHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccc-----cccceeeeecccccc
Confidence 000111122 369999999998886566679999999999999999998876 789999999887764
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.47 E-value=2.2e-12 Score=131.29 Aligned_cols=71 Identities=18% Similarity=0.181 Sum_probs=52.4
Q ss_pred cccCCCCcccEEEEeeCCCCcCCHHHHHHHHHhcCCCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 396 KDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 396 ~~~l~~i~vPvLii~G~~D~~vp~~~~~~~~~~l~~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
...+.+|++|+|+|+|..|..+++..+.++++.++.......++ -.++|... ......++.+.+++|++++
T Consensus 305 ~~~~~~I~vP~L~i~Gw~D~~v~~~~~~~~y~al~~~~~~~Lil-----gpw~H~~~--~~~~~~d~~~~~~~wFD~~ 375 (405)
T d1lnsa3 305 LINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFL-----HRGAHIYM--NSWQSIDFSETINAYFVAK 375 (405)
T ss_dssp GGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEE-----ESCSSCCC--TTBSSCCHHHHHHHHHHHH
T ss_pred hhhhhcCCCCEEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEE-----eCCCCCCC--cccccchHHHHHHHHHHHH
Confidence 45788999999999999999999999999999886533223333 25788532 1223456788899999875
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.43 E-value=1.6e-13 Score=117.26 Aligned_cols=53 Identities=19% Similarity=0.413 Sum_probs=40.8
Q ss_pred eEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccc
Q 011833 69 YVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 69 ~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~ 142 (476)
++.+ +|.++++... +.+|||||+||.+ ..|. +.| .++|+|+++|+||||.|++
T Consensus 5 ~~~~--~G~~l~y~~~-------G~G~pvlllHG~~---~~w~--------~~L-~~~yrvi~~DlpG~G~S~~ 57 (122)
T d2dsta1 5 YLHL--YGLNLVFDRV-------GKGPPVLLVAEEA---SRWP--------EAL-PEGYAFYLLDLPGYGRTEG 57 (122)
T ss_dssp EEEE--TTEEEEEEEE-------CCSSEEEEESSSG---GGCC--------SCC-CTTSEEEEECCTTSTTCCC
T ss_pred EEEE--CCEEEEEEEE-------cCCCcEEEEeccc---cccc--------ccc-cCCeEEEEEeccccCCCCC
Confidence 6666 9999999886 3469999999943 3452 123 4689999999999999964
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.43 E-value=1.6e-13 Score=133.80 Aligned_cols=104 Identities=21% Similarity=0.217 Sum_probs=81.0
Q ss_pred CCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccchh
Q 011833 93 RNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSK 172 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (476)
.+.||||+||++++...|.......+.+.|.++||+|+++|++|+|.+...
T Consensus 6 ~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~~~----------------------------- 56 (285)
T d1ex9a_ 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVR----------------------------- 56 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHHHH-----------------------------
T ss_pred CCCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcHHH-----------------------------
Confidence 467899999998876653222226799999999999999999999865221
Q ss_pred hhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCCCC
Q 011833 173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKD 252 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~ 252 (476)
.+++.+.|+.+.+..+.+
T Consensus 57 -------------------------------------------------------------a~~l~~~i~~~~~~~g~~- 74 (285)
T d1ex9a_ 57 -------------------------------------------------------------GEQLLQQVEEIVALSGQP- 74 (285)
T ss_dssp -------------------------------------------------------------HHHHHHHHHHHHHHHCCS-
T ss_pred -------------------------------------------------------------HHHHHHHHHHHHHHcCCC-
Confidence 134455555566666554
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
|+++|||||||.++..++.++| ++|+++|+++++.
T Consensus 75 -~v~ligHS~GG~~~r~~~~~~p-----~~v~~lv~i~tPh 109 (285)
T d1ex9a_ 75 -KVNLIGHSHGGPTIRYVAAVRP-----DLIASATSVGAPH 109 (285)
T ss_dssp -CEEEEEETTHHHHHHHHHHHCG-----GGEEEEEEESCCT
T ss_pred -eEEEEEECccHHHHHHHHHHCC-----ccceeEEEECCCC
Confidence 8999999999999999999988 8999999999763
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.41 E-value=1.8e-12 Score=126.40 Aligned_cols=61 Identities=20% Similarity=0.088 Sum_probs=42.5
Q ss_pred CCCce-EEEEEEEcCCCCCCCCCCcEEEecCCC---CCcceeecCCCCCHHHHHH-hCCCcEEEecCCCCCC
Q 011833 73 PNSDW-RLALWRYLPSPAAPQRNHPLLLLSGIG---TNAIGYDLSPEYSFARYMS-GQGFDTWILEVRGAGL 139 (476)
Q Consensus 73 ~~dG~-~L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~~~L~-~~Gy~V~~~D~rG~G~ 139 (476)
..||. .+.++.|.|.+. .++.|+||++||.+ ++...+ ..+...++ +.||.|+.+|+|....
T Consensus 57 ~~~g~~~i~~~~~~P~~~-~~~~Pvvv~iHGGG~~~g~~~~~-----~~~~~~la~~~G~~V~~vdYrl~pe 122 (317)
T d1lzla_ 57 GLDGDPEVKIRFVTPDNT-AGPVPVLLWIHGGGFAIGTAESS-----DPFCVEVARELGFAVANVEYRLAPE 122 (317)
T ss_dssp CSTTCCCEEEEEEEESSC-CSCEEEEEEECCSTTTSCCGGGG-----HHHHHHHHHHHCCEEEEECCCCTTT
T ss_pred cCCCCceEEEEEECCCCC-CCCCcEEEEecCccccccccccc-----chHHHhHHhhcCCcccccccccccc
Confidence 45664 688888888653 34568899999963 233333 35666665 4599999999998754
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.40 E-value=6.2e-12 Score=118.15 Aligned_cols=65 Identities=14% Similarity=0.085 Sum_probs=47.6
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcC---------CCceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIP---------EHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~---------~~~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
.-|+|++||++|..||..++.++++++. +..++++++ |+.||. +.......-+.+..+++||+++
T Consensus 200 ~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~-----~~~gHg-f~~~~~~~~~~~~~~~~fl~k~ 273 (280)
T d1qfma2 200 YPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVD-----TKAGHG-AGKPTAKVIEEVSDMFAFIARC 273 (280)
T ss_dssp CCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEE-----SSCCSS-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEe-----CcCCCC-CCCcHHHHHHHHHHHHHHHHHh
Confidence 4589999999999999999999999882 334667777 999993 2211111124556789999987
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.38 E-value=2.6e-12 Score=118.87 Aligned_cols=58 Identities=17% Similarity=0.255 Sum_probs=45.8
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcCCC--ceeEEEecCCCCCCCcccccccccCCccchhHHHHHHHHhh
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIPEH--LVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
+.|++++||++|.++|.+..+++.+.+... +++++++ + .||. + ..+..+.+.+||.++
T Consensus 157 ~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~-----~-~gH~-i------~~~~~~~i~~wl~~~ 216 (218)
T d1auoa_ 157 RIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEY-----P-MGHE-V------LPQEIHDIGAWLAAR 216 (218)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEE-----S-CSSS-C------CHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEEEE-----C-CCCc-c------CHHHHHHHHHHHHHh
Confidence 679999999999999999999999988654 3566665 4 7892 1 245678999999874
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.38 E-value=2.4e-12 Score=128.67 Aligned_cols=139 Identities=14% Similarity=0.078 Sum_probs=93.7
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCC---Ccc--eeecCCCCCHHHHHHhCCCcEEEecCCCCCCcc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGT---NAI--GYDLSPEYSFARYMSGQGFDTWILEVRGAGLSA 141 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~---~~~--~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~ 141 (476)
.+.+. +.||..|.++.|.|.+. .++.|+||++||.+- +.. .+ ..+++.|+++|+.|+.+|+|..+...
T Consensus 81 ~~~i~-~~dg~~i~~~iy~P~~~-~~~~Pviv~~HGGG~~~gs~~~~~~-----~~~~~~la~~g~~VvsvdYRla~~~~ 153 (358)
T d1jkma_ 81 TETIL-GVDGNEITLHVFRPAGV-EGVLPGLVYTHGGGMTILTTDNRVH-----RRWCTDLAAAGSVVVMVDFRNAWTAE 153 (358)
T ss_dssp EEEEE-CTTSCEEEEEEEEETTC-CSCEEEEEEECCSTTTSSCSSSHHH-----HHHHHHHHHTTCEEEEEECCCSEETT
T ss_pred EEEEe-CCCCCEEEEEEEecCCC-CCCCCeEEEecCCeeeecccccccc-----chHHHHHHhhhheeeeeeeccccccc
Confidence 34454 67999999999988754 345688999999743 221 12 24678889999999999999875432
Q ss_pred cccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhc
Q 011833 142 HRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDL 221 (476)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (476)
...
T Consensus 154 pe~----------------------------------------------------------------------------- 156 (358)
T d1jkma_ 154 GHH----------------------------------------------------------------------------- 156 (358)
T ss_dssp EEC-----------------------------------------------------------------------------
T ss_pred ccC-----------------------------------------------------------------------------
Confidence 211
Q ss_pred ccccCCCchhhhhccHHHHHHHHHHHh-CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 222 IVKNDWDFDHYLEEDVPAVMEYIRTLS-KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 222 ~~~~~~~~~~~~~~Dl~a~i~~l~~~~-~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
.+.. ..+|+.+++.|++++. ..+.+++.++|+|.||.+++.++....-.+....+.+++++.|..+..
T Consensus 157 ------~~p~-~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~~ 225 (358)
T d1jkma_ 157 ------PFPS-GVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGG 225 (358)
T ss_dssp ------CTTH-HHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCC
T ss_pred ------CCch-hhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceeccc
Confidence 1111 2379999999997642 223358999999999999876654321011125678888888766543
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.32 E-value=5.7e-12 Score=119.99 Aligned_cols=105 Identities=11% Similarity=0.084 Sum_probs=74.5
Q ss_pred CCCcEEEecCC--CCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCccccccccccccCCCcccccccc
Q 011833 93 RNHPLLLLSGI--GTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQ 170 (476)
Q Consensus 93 ~~~~VlllHG~--~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 170 (476)
.+++||++||+ +++...| ..+++.|.. .+.|+++|++|+|.+....
T Consensus 41 ~~~~l~c~~~~~~gg~~~~y-----~~La~~L~~-~~~V~al~~pG~~~~e~~~-------------------------- 88 (255)
T d1mo2a_ 41 GEVTVICCAGTAAISGPHEF-----TRLAGALRG-IAPVRAVPQPGYEEGEPLP-------------------------- 88 (255)
T ss_dssp CSSEEEEECCCSSSCSGGGG-----HHHHHHHTT-TCCEEEECCTTSSTTCCEE--------------------------
T ss_pred CCCeEEEECCCCCCCCHHHH-----HHHHHhcCC-CceEEEEeCCCcCCCCCCC--------------------------
Confidence 36889999995 4566677 588898876 4899999999999875422
Q ss_pred hhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCchhhhhccHHHHHHHHHHHhCC
Q 011833 171 SKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAVMEYIRTLSKP 250 (476)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~ 250 (476)
.++++++ ++ .++.|++..+
T Consensus 89 --------------------------------------------------------~s~~~~a-~~---~~~~i~~~~~- 107 (255)
T d1mo2a_ 89 --------------------------------------------------------SSMAAVA-AV---QADAVIRTQG- 107 (255)
T ss_dssp --------------------------------------------------------SSHHHHH-HH---HHHHHHHTTS-
T ss_pred --------------------------------------------------------CCHHHHH-HH---HHHHHHHhCC-
Confidence 1233333 22 3345544443
Q ss_pred CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 251 KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 251 ~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
.++++++||||||.+++.+|.+.+ ....+|.+++++++..
T Consensus 108 -~~P~~L~GhS~Gg~vA~e~A~~l~--~~g~~v~~lvlld~~~ 147 (255)
T d1mo2a_ 108 -DKPFVVAGHSAGALMAYALATELL--DRGHPPRGVVLIDVYP 147 (255)
T ss_dssp -SSCEEEEECSTTHHHHHHHHHHHH--HHTCCCSEEEEEECSC
T ss_pred -CCCEEEEEeCCcHHHHHHHHHhhH--hcCCCccEEEEECCCC
Confidence 358999999999999999997643 1135689999998753
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.32 E-value=6.2e-12 Score=121.76 Aligned_cols=128 Identities=17% Similarity=0.154 Sum_probs=84.7
Q ss_pred CCceEEEEEEEcCCCCCCCCCCcEEEecCCC---CCcceeecCCCCCHHHHHHhCC-CcEEEecCCCCCCcccccccCcc
Q 011833 74 NSDWRLALWRYLPSPAAPQRNHPLLLLSGIG---TNAIGYDLSPEYSFARYMSGQG-FDTWILEVRGAGLSAHRVEFGED 149 (476)
Q Consensus 74 ~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~~~L~~~G-y~V~~~D~rG~G~S~~~~~~~~~ 149 (476)
.+|..+.++.|.|.+. .++.|+||++||.+ ++...+ ..+...++.+| +.|+.+|+|.......
T Consensus 53 ~~g~~i~~~~y~P~~~-~~~~Pvvv~iHGGg~~~g~~~~~-----~~~~~~~a~~~~~~v~~v~Yrl~p~~~~------- 119 (308)
T d1u4na_ 53 LPGRTLKVRMYRPEGV-EPPYPALVYYHGGGWVVGDLETH-----DPVCRVLAKDGRAVVFSVDYRLAPEHKF------- 119 (308)
T ss_dssp ETTEEEEEEEEECTTC-CSSEEEEEEECCSTTTSCCTTTT-----HHHHHHHHHHHTSEEEEECCCCTTTSCT-------
T ss_pred cCCceEEEEEEecccc-CCCCCEEEEEecCeeeeeccccc-----cchhhhhhhccccccccccccccccccc-------
Confidence 4898999999988654 34568899999974 222222 35667777665 5688899986643211
Q ss_pred ccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCCc
Q 011833 150 SMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDF 229 (476)
Q Consensus 150 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (476)
T Consensus 120 -------------------------------------------------------------------------------- 119 (308)
T d1u4na_ 120 -------------------------------------------------------------------------------- 119 (308)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 230 DHYLEEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 230 ~~~~~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
.. ..+|+..++.++.++. +.+.++|.++|+|.||.+++.++....-.. ...+.+..++.+..++.
T Consensus 120 p~-~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 187 (308)
T d1u4na_ 120 PA-AVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERG-GPALAFQLLIYPSTGYD 187 (308)
T ss_dssp TH-HHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHT-CCCCCCEEEESCCCCCC
T ss_pred cc-ccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhcc-CCCcccccccccccccc
Confidence 11 1368888999998754 333458999999999999888776543111 13456666666655433
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.31 E-value=7.6e-12 Score=122.28 Aligned_cols=131 Identities=13% Similarity=0.127 Sum_probs=86.3
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCC---CCcceeecCCCCCHHHHHH-hCCCcEEEecCCCCCCccc
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIG---TNAIGYDLSPEYSFARYMS-GQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~---~~~~~~~~~~~~~l~~~L~-~~Gy~V~~~D~rG~G~S~~ 142 (476)
...+. ..+| .+.++.|.|.+ ..|+||++||.+ ++...+ ..+...++ +.|+.|+.+|+|..-...
T Consensus 58 ~~~i~-~~~g-~i~~~iy~P~~----~~P~il~iHGGg~~~g~~~~~-----~~~~~~l~~~~g~~Vv~v~Yrlap~~~- 125 (311)
T d1jjia_ 58 DRTIK-GRNG-DIRVRVYQQKP----DSPVLVYYHGGGFVICSIESH-----DALCRRIARLSNSTVVSVDYRLAPEHK- 125 (311)
T ss_dssp EEEEE-ETTE-EEEEEEEESSS----SEEEEEEECCSTTTSCCTGGG-----HHHHHHHHHHHTSEEEEEECCCTTTSC-
T ss_pred EEEEe-CCCC-cEEEEEEcCCC----CceEEEEEcCCCCccCChhhh-----hhhhhhhhhcCCcEEEEeccccccccc-
Confidence 34554 4556 68888888864 358999999974 233333 35666665 469999999999764321
Q ss_pred ccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLI 222 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (476)
T Consensus 126 -------------------------------------------------------------------------------- 125 (311)
T d1jjia_ 126 -------------------------------------------------------------------------------- 125 (311)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCchhhhhccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC
Q 011833 223 VKNDWDFDHYLEEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 223 ~~~~~~~~~~~~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~ 297 (476)
+.. ..+|+.++++++.++. +.+.++|.++|+|.||.+++.++.... ......+.+.+++.|..+...
T Consensus 126 ------~p~-~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~-~~~~~~~~~~~l~~p~~~~~~ 195 (311)
T d1jjia_ 126 ------FPA-AVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMAR-DSGEDFIKHQILIYPVVNFVA 195 (311)
T ss_dssp ------TTH-HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHH-HTTCCCEEEEEEESCCCCSSS
T ss_pred ------cch-hhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhh-hccccccceeeeecceeeecc
Confidence 111 1367777888876653 333458999999999998876664332 111356778888888876554
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.28 E-value=6.3e-12 Score=126.72 Aligned_cols=149 Identities=14% Similarity=0.077 Sum_probs=101.4
Q ss_pred eeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCc------ceee-cCCCCCHHHHHHhCCCcEEEecCCCCCC
Q 011833 67 LHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNA------IGYD-LSPEYSFARYMSGQGFDTWILEVRGAGL 139 (476)
Q Consensus 67 ~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~------~~~~-~~~~~~l~~~L~~~Gy~V~~~D~rG~G~ 139 (476)
...|. ..||.+|.+..|.|... ++-|+||+.|+.+... ..+. ..........|+++||.|+.+|.||.|.
T Consensus 30 ~v~ip-mrDG~~L~~~v~~P~~~--~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~ 106 (385)
T d2b9va2 30 EVMVP-MRDGVKLYTVIVIPKNA--RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYG 106 (385)
T ss_dssp EEEEE-CTTSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTT
T ss_pred EEEEE-CCCCCEEEEEEEEcCCC--CceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccC
Confidence 34566 68999999999999753 4556677777663211 0000 0112356788999999999999999999
Q ss_pred cccccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhh
Q 011833 140 SAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQL 219 (476)
Q Consensus 140 S~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (476)
|.+..... ... ++
T Consensus 107 S~G~~~~~-------------------~~~----------------------~~-------------------------- 119 (385)
T d2b9va2 107 SQGDYVMT-------------------RPP----------------------HG-------------------------- 119 (385)
T ss_dssp CCSCCCTT-------------------CCC----------------------SB--------------------------
T ss_pred CCCceeec-------------------ccc----------------------cc--------------------------
Confidence 97633200 000 00
Q ss_pred hcccccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 220 DLIVKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 220 ~~~~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
....+...+ .+|..++|+++.++.....++|.++|+|+||.+++.+|...| +.+++++..++..+.
T Consensus 120 ---~~~~~~~~e--~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~-----~~l~a~~~~~~~~d~ 185 (385)
T d2b9va2 120 ---PLNPTKTDE--TTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPH-----PALKVAAPESPMVDG 185 (385)
T ss_dssp ---TTBCSSCCH--HHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCC-----TTEEEEEEEEECCCT
T ss_pred ---ccccchhhH--HHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccC-----CcceEEEEecccccc
Confidence 000111122 369999999998876555679999999999999999998865 788899888876654
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.20 E-value=1.1e-10 Score=109.53 Aligned_cols=54 Identities=17% Similarity=0.201 Sum_probs=41.3
Q ss_pred cHHHHHHHHHHHhC--CCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 236 DVPAVMEYIRTLSK--PKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 236 Dl~a~i~~l~~~~~--~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
.+.+++.++.+... .+.+++.++|+||||..++.++.++| ..+++++.+++...
T Consensus 116 ~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~P-----d~F~~v~~~sg~~~ 171 (255)
T d1jjfa_ 116 LLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNL-----DKFAYIGPISAAPN 171 (255)
T ss_dssp HHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCT-----TTCSEEEEESCCTT
T ss_pred HHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCC-----CcccEEEEEccCcC
Confidence 34445566655543 33457999999999999999999998 88999998887653
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.93 E-value=3.4e-09 Score=99.00 Aligned_cols=57 Identities=16% Similarity=0.276 Sum_probs=41.7
Q ss_pred hhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccc
Q 011833 233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 233 ~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~ 295 (476)
+.+++..+++.... ...+.+++.++|+||||..++.++.++| +.+.+++.+++..++
T Consensus 104 ~~~el~~~v~~~~~-~~~d~~~~~i~G~S~GG~~al~~~~~~P-----~~F~a~~~~sg~~~~ 160 (246)
T d3c8da2 104 VQQELLPLVKVIAP-FSDRADRTVVAGQSFGGLSALYAGLHWP-----ERFGCVLSQSGSYWW 160 (246)
T ss_dssp HHHTHHHHHHHHSC-CCCCGGGCEEEEETHHHHHHHHHHHHCT-----TTCCEEEEESCCTTT
T ss_pred HHHHhhhHHHHhcc-cccCccceEEEecCchhHHHhhhhccCC-----chhcEEEcCCccccc
Confidence 44455544443211 1233457999999999999999999998 889999999987653
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.89 E-value=9.4e-09 Score=98.07 Aligned_cols=147 Identities=13% Similarity=0.157 Sum_probs=98.2
Q ss_pred ceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCCCcc--eeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccc
Q 011833 66 ELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAI--GYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHR 143 (476)
Q Consensus 66 e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~~~~--~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~ 143 (476)
+...+.-...|..+.+..+.|. ++.|+|+++||.+++.. .|.. ...+.+.+.+.|+.|++++..+.+.....
T Consensus 10 ~~~~~~s~~~~r~~~~~v~~p~----~~~Pvl~llhG~~~~~d~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 83 (288)
T d1sfra_ 10 EYLQVPSPSMGRDIKVQFQSGG----ANSPALYLLDGLRAQDDFSGWDI--NTPAFEWYDQSGLSVVMPVGGQSSFYSDW 83 (288)
T ss_dssp EEEEEEETTTTEEEEEEEECCS----TTBCEEEEECCTTCCSSSCHHHH--HCCHHHHHTTSSCEEEEECCCTTCTTCBC
T ss_pred EEEEEECCCCCcEEEEEEeCCC----CCceEEEEcCCCCCCCcchhhhh--hccHHHHHHhCCCEEEEeccCCCCCCccc
Confidence 3444543557888887776553 34788999999876543 3321 12467788889999999998776654332
Q ss_pred cccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhccc
Q 011833 144 VEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIV 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (476)
.... .... .
T Consensus 84 ~~~~------------------~~~~-----------------------------------------------------~ 92 (288)
T d1sfra_ 84 YQPA------------------CGKA-----------------------------------------------------G 92 (288)
T ss_dssp SSCE------------------EETT-----------------------------------------------------E
T ss_pred cCcc------------------cccc-----------------------------------------------------c
Confidence 1100 0000 0
Q ss_pred ccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC
Q 011833 224 KNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 224 ~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~ 297 (476)
...+.++.++ +.+++.+|.++...+.+++.++|+||||..++.++.++| +++++++++++..+...
T Consensus 93 ~~~~~~~~~~---~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~p-----d~f~av~~~Sg~~~~~~ 158 (288)
T d1sfra_ 93 CQTYKWETFL---TSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHP-----QQFVYAGAMSGLLDPSQ 158 (288)
T ss_dssp EECCBHHHHH---HTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCT-----TTEEEEEEESCCSCTTS
T ss_pred ccchhHHHHH---HHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhcc-----ccccEEEEecCcccccc
Confidence 0112334444 344567777777777678999999999999999999998 88999999998776443
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.84 E-value=2.7e-08 Score=94.32 Aligned_cols=138 Identities=14% Similarity=0.191 Sum_probs=93.6
Q ss_pred CceeeEeeCCCceEEEEEEEcCCCCCCCCCCcEEEecCCCC--CcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCccc
Q 011833 65 DELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGT--NAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAH 142 (476)
Q Consensus 65 ~e~~~v~~~~dG~~L~~~~~~p~~~~~~~~~~VlllHG~~~--~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~ 142 (476)
.|..+|.-...|..+.+..+.+. .|+|+|+||.++ +...|.. ...+.+.+.+.++.|+++|--+.+.-..
T Consensus 4 ~e~~~v~s~~~~r~~~~~v~~~~------~pvlylLhG~~g~~~~~~w~~--~~~~~~~~~~~~~iVV~p~g~~~~~y~~ 75 (267)
T d1r88a_ 4 YENLMVPSPSMGRDIPVAFLAGG------PHAVYLLDAFNAGPDVSNWVT--AGNAMNTLAGKGISVVAPAGGAYSMYTN 75 (267)
T ss_dssp CEEEEEEETTTTEEEEEEEECCS------SSEEEEECCSSCCSSSCHHHH--TSCHHHHHTTSSSEEEEECCCTTSTTSB
T ss_pred eEEEEEecccCCceeeEEEECCC------CCEEEEcCCCCCCCCcchhhh--ccHHHHHHhhCCeEEEEECCCCCcCCcc
Confidence 45666654567888887776432 489999999754 3445631 1356777888999999998311111000
Q ss_pred ccccCccccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcc
Q 011833 143 RVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLI 222 (476)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (476)
|...
T Consensus 76 -----------------------~~~~----------------------------------------------------- 79 (267)
T d1r88a_ 76 -----------------------WEQD----------------------------------------------------- 79 (267)
T ss_dssp -----------------------CSSC-----------------------------------------------------
T ss_pred -----------------------cccc-----------------------------------------------------
Confidence 0000
Q ss_pred cccCCCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 223 VKNDWDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 223 ~~~~~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
....+++|+.+|+. .+|.+....+.+++.+.|+||||..++.++.++| +.+++++.+++.....
T Consensus 80 --~~~~~~tfl~~eL~---~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~P-----d~F~av~~~SG~~~~~ 143 (267)
T d1r88a_ 80 --GSKQWDTFLSAELP---DWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHP-----DRFGFAGSMSGFLYPS 143 (267)
T ss_dssp --TTCBHHHHHHTHHH---HHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCT-----TTEEEEEEESCCCCTT
T ss_pred --ccccHHHHHHHHHH---HHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCc-----ccccEEEEeCCccCCC
Confidence 01234566666664 5566666666678999999999999999999998 8999999999876543
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.76 E-value=5.5e-09 Score=98.01 Aligned_cols=52 Identities=19% Similarity=0.141 Sum_probs=37.0
Q ss_pred cHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 236 DVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 236 Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
...+++.++.+....+..++.++||||||.+++.++.+. ..+.+++.+++..
T Consensus 124 ~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~~------~~f~~~~a~s~~~ 175 (265)
T d2gzsa1 124 LETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLSS------SYFRSYYSASPSL 175 (265)
T ss_dssp HHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHHC------SSCSEEEEESGGG
T ss_pred HHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHHHHHcC------cccCEEEEECCcc
Confidence 334456666666555445789999999999999877653 4567777777654
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.72 E-value=8.7e-08 Score=91.25 Aligned_cols=62 Identities=16% Similarity=0.240 Sum_probs=48.8
Q ss_pred CCchhhhhccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 227 WDFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 227 ~~~~~~~~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
+.+++++.+++ +.+|.++...+.+++.+.|+||||..++.++.++| +++++++.+++..+..
T Consensus 91 ~~~~~~~~~el---~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~P-----d~F~av~s~SG~~~~~ 152 (280)
T d1dqza_ 91 YKWETFLTREM---PAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYP-----QQFPYAASLSGFLNPS 152 (280)
T ss_dssp CBHHHHHHTHH---HHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCT-----TTCSEEEEESCCCCTT
T ss_pred hhHHHHHHHHH---HHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCc-----CceeEEEEecCccCcc
Confidence 44566665655 45555666666568999999999999999999998 8999999999877544
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.71 E-value=8e-09 Score=99.52 Aligned_cols=37 Identities=22% Similarity=0.372 Sum_probs=32.7
Q ss_pred CcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 253 GKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 253 ~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
+++++|||||||.++-.++.+++ ...|..+|.+++|-
T Consensus 80 ~~v~lVGhSqGGLiaR~~i~~~~----~~~V~~lITLgsPH 116 (279)
T d1ei9a_ 80 QGYNAMGFSQGGQFLRAVAQRCP----SPPMVNLISVGGQH 116 (279)
T ss_dssp TCEEEEEETTHHHHHHHHHHHCC----SSCEEEEEEESCCT
T ss_pred cceeEEEEccccHHHHHHHHHcC----CCCcceEEEECCCC
Confidence 48999999999999999999987 46799999999763
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.57 E-value=4.9e-07 Score=87.62 Aligned_cols=160 Identities=14% Similarity=0.131 Sum_probs=89.3
Q ss_pred CceEEEEEEEcCCCCC------CCCCCcEEEecCCCCCcceeecCCCCCHHHHHHhCCCcEEEecCCCCCCcccccccCc
Q 011833 75 SDWRLALWRYLPSPAA------PQRNHPLLLLSGIGTNAIGYDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFGE 148 (476)
Q Consensus 75 dG~~L~~~~~~p~~~~------~~~~~~VlllHG~~~~~~~~~~~~~~~l~~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~ 148 (476)
-|....+..|.|..-. ..+-|+|.|+||++++...|.. ...+.+.+.+.|..|++.+..+...-......
T Consensus 24 l~~~~~~~VyLP~~y~~~~~~~~~~yPVLYlLhG~~~~~~~w~~--~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~-- 99 (299)
T d1pv1a_ 24 TKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASE--KAFWQFQADKYGFAIVFPDTSPRGDEVANDPE-- 99 (299)
T ss_dssp SSSEEEEEEEECTTTTSCCCSSCTTBCEEEEECCTTCCHHHHHH--HSCHHHHHHHHTCEEEECCSSCCSTTSCCCTT--
T ss_pred cCCceEEEEEeCCcccccCcccCCCCCEEEEcCCCCCCHHHHHH--hhhHHHHHHHcCCceecCCCcccccccCCccc--
Confidence 4677777788776421 1234788899999998877731 11345666677999999886443221110000
Q ss_pred cccccccccccCCCcccccccchhhhHHHHHHhhhhhhccccCCCCCCCCcchhhhhhhccchhhHHHhhhhcccccCCC
Q 011833 149 DSMITSANAKSTGGTTLSRESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWD 228 (476)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (476)
..-..|....|..+.. ...+ ...+.
T Consensus 100 -------~~~~~g~~~~~y~d~~----------------------------------------~~p~--------~~~~~ 124 (299)
T d1pv1a_ 100 -------GSWDFGQGAGFYLNAT----------------------------------------QEPY--------AQHYQ 124 (299)
T ss_dssp -------CCSSSSSSCCTTCBCC----------------------------------------SHHH--------HTTCB
T ss_pred -------ccccccCCCccccccc----------------------------------------cCCc--------ccccc
Confidence 0000121122111110 0000 01245
Q ss_pred chhhhhccHHHHHHHHHHHhCC----CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccccc
Q 011833 229 FDHYLEEDVPAVMEYIRTLSKP----KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYR 296 (476)
Q Consensus 229 ~~~~~~~Dl~a~i~~l~~~~~~----~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~ 296 (476)
+++|+.+++...|+..-..... +..+..+.||||||.-++.++.+++ ...++.++..+++.....
T Consensus 125 ~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~---~p~~f~~~~s~s~~~~~~ 193 (299)
T d1pv1a_ 125 MYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGY---SGKRYKSCSAFAPIVNPS 193 (299)
T ss_dssp HHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTG---GGTCCSEEEEESCCCCST
T ss_pred hHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhc---CCCceEEEeeccCcCCcc
Confidence 6777777777666644322111 1136899999999999999887642 126788888888765433
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.36 E-value=2.1e-06 Score=79.78 Aligned_cols=42 Identities=19% Similarity=0.216 Sum_probs=36.2
Q ss_pred CCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccccccC
Q 011833 251 KDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRP 297 (476)
Q Consensus 251 ~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~~~~ 297 (476)
+.+++.+.|+||||..++.++.++| +.+++++.+++......
T Consensus 142 d~~~~~i~G~S~GG~~a~~~a~~~p-----d~f~a~~~~sg~~~~~~ 183 (273)
T d1wb4a1 142 SRMHRGFGGFAMGGLTTWYVMVNCL-----DYVAYFMPLSGDYWYGN 183 (273)
T ss_dssp TGGGEEEEEETHHHHHHHHHHHHHT-----TTCCEEEEESCCCCBSS
T ss_pred CccceEEEeeCCcchhhhhhhhcCC-----CcceEEEEeCcccccCC
Confidence 4458999999999999999999988 88999999998765443
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.28 E-value=3.3e-07 Score=90.16 Aligned_cols=55 Identities=16% Similarity=0.221 Sum_probs=43.8
Q ss_pred hccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 234 EEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
-+.+..+|+++.+..+...+++++||||+||.++-.+..+ . .++.+++.+.|...
T Consensus 127 g~~ia~~i~~l~~~~g~~~~~vhlIGhSLGAhvAG~aG~~-~-----~~l~rItgLDPA~P 181 (337)
T d1rp1a2 127 GAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSR-T-----PGLGRITGLDPVEA 181 (337)
T ss_dssp HHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHT-S-----TTCCEEEEESCCCT
T ss_pred HHHHHHHHHHHHHhcCCChhheEEEeecHHHhhhHHHHHh-h-----ccccceeccCCCcc
Confidence 3677888988888877766799999999999999655544 2 46899999988654
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.17 E-value=8.9e-07 Score=86.92 Aligned_cols=55 Identities=13% Similarity=0.162 Sum_probs=44.8
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
+.+..+|+.+....+...+++++||||+|+.++-.+....+ .+|.+++.+.|...
T Consensus 128 ~~ia~~i~~l~~~~g~~~~~vhlIGhSLGAhiaG~ag~~l~-----~kigrItgLDPA~P 182 (338)
T d1bu8a2 128 AEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLE-----GHVGRITGLDPAEP 182 (338)
T ss_dssp HHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTT-----TCSSEEEEESCBCT
T ss_pred HHHHHHHHHHHHhcCCCcceeEEEeccHHHHHHHHHHHhhc-----cccccccccccCcC
Confidence 56777888887777776679999999999999988877643 57999999988653
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.15 E-value=3.3e-06 Score=84.49 Aligned_cols=48 Identities=17% Similarity=0.284 Sum_probs=33.0
Q ss_pred CCCcEEEecCCCCCcc--eeecCCCC----CHHHHHHhCCCcEEEecCCCCCCc
Q 011833 93 RNHPLLLLSGIGTNAI--GYDLSPEY----SFARYMSGQGFDTWILEVRGAGLS 140 (476)
Q Consensus 93 ~~~~VlllHG~~~~~~--~~~~~~~~----~l~~~L~~~Gy~V~~~D~rG~G~S 140 (476)
.+.||||+||+.+-.. ...+.... .+.+.|.++|+.|++......+..
T Consensus 6 ~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~~S~ 59 (388)
T d1ku0a_ 6 NDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSN 59 (388)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSSBCH
T ss_pred CCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCccCH
Confidence 4789999999865421 11011112 378889999999999998777644
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.06 E-value=0.00019 Score=71.96 Aligned_cols=63 Identities=14% Similarity=0.216 Sum_probs=49.5
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcCCC---------------------------ceeEEEecCCCCCCCcccccccc
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIPEH---------------------------LVSFKVFGEPRGPHYAHYDLVGS 455 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~~~---------------------------~~~~~v~~~~~~~~~gH~~~~~~ 455 (476)
++.||+.+|+.|.+||....+...+.+.-. +.++..+ .++|| ++.
T Consensus 361 ~~rVliy~Gd~D~~~~~~gte~~i~~l~~~~~~~~~~~~~~~~~~~~~v~G~v~~~~nltf~~V-----~~AGH---mVP 432 (452)
T d1ivya_ 361 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTI-----KGAGH---MVP 432 (452)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEE-----TTCCS---SHH
T ss_pred CCEEEEEeCCcceeCCCHHHHHHHHhcCCccccccccceecccCCCCEEEEEEEEECCeEEEEE-----CCccc---cCc
Confidence 579999999999999999999988887521 1122333 68999 566
Q ss_pred cCCccchhHHHHHHHHhh
Q 011833 456 RLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 456 ~~~~~~v~~~i~~fL~~~ 473 (476)
.+.|+..+..+-.||+..
T Consensus 433 ~dqP~~a~~m~~~fi~g~ 450 (452)
T d1ivya_ 433 TDKPLAAFTMFSRFLNKQ 450 (452)
T ss_dssp HHCHHHHHHHHHHHHTTC
T ss_pred ccCHHHHHHHHHHHHcCC
Confidence 788999999999999753
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.04 E-value=1.1e-05 Score=78.45 Aligned_cols=44 Identities=9% Similarity=0.044 Sum_probs=36.1
Q ss_pred CcccEEEEeeCCCCcCCHHHHHHHHHhcCC----CceeEEEecCCCCCCCccc
Q 011833 402 TNVPVLALAADQDLICPTEAVYETVKLIPE----HLVSFKVFGEPRGPHYAHY 450 (476)
Q Consensus 402 i~vPvLii~G~~D~~vp~~~~~~~~~~l~~----~~~~~~v~~~~~~~~~gH~ 450 (476)
.+.|++++||++|..||++.++++.+.+.+ ..+.++.. +++||.
T Consensus 89 ~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~-----~gagH~ 136 (318)
T d2d81a1 89 GQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTT-----TGAVHT 136 (318)
T ss_dssp GGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEE-----TTCCSS
T ss_pred CCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEe-----CCCCCC
Confidence 468999999999999999999999888754 34566665 899993
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.84 E-value=0.00078 Score=67.04 Aligned_cols=62 Identities=16% Similarity=0.237 Sum_probs=48.4
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcCC-----------------------------CceeEEEecCCCCCCCcccccc
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIPE-----------------------------HLVSFKVFGEPRGPHYAHYDLV 453 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~~-----------------------------~~~~~~v~~~~~~~~~gH~~~~ 453 (476)
+++||+.+|+.|.+||....+...+.++- ...++..+ .++|| +
T Consensus 327 ~irVLIysGd~D~~~p~~Gte~~i~~L~w~~~~~f~~~~~~~w~~~~~~~~aG~~~~~~nltf~~V-----~~AGH---m 398 (421)
T d1wpxa1 327 DLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRV-----FNGGH---M 398 (421)
T ss_dssp TCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEEEEETTEEEEEE-----TTCCS---S
T ss_pred CCeEEEEeCCcCccCCchhHHHHHHhCCCCcccchhcCcccceeecCCCeEEEEEEEECCeEEEEE-----CCccc---c
Confidence 57999999999999999988888877641 01233333 79999 5
Q ss_pred cccCCccchhHHHHHHHHh
Q 011833 454 GSRLAAYQVYPCIIEFLTR 472 (476)
Q Consensus 454 ~~~~~~~~v~~~i~~fL~~ 472 (476)
+..+.|+..+..+-+||+.
T Consensus 399 vP~d~P~~a~~m~~~fi~G 417 (421)
T d1wpxa1 399 VPFDVPENALSMVNEWIHG 417 (421)
T ss_dssp HHHHCHHHHHHHHHHHHTT
T ss_pred CcccCHHHHHHHHHHHhcC
Confidence 5678899999999999964
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=97.14 E-value=0.00036 Score=70.46 Aligned_cols=58 Identities=17% Similarity=0.225 Sum_probs=43.5
Q ss_pred hccHHHHHHHHHHHhC---CCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 234 EEDVPAVMEYIRTLSK---PKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~---~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
..|..++++|+++... -+.++|.++|||-||..+...+.. |.. ...+.++|+.++...
T Consensus 158 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s-p~~--~gLF~raI~~SGs~~ 218 (483)
T d1qe3a_ 158 LLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAM-PAA--KGLFQKAIMESGASR 218 (483)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTC-GGG--TTSCSEEEEESCCCC
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcc-ccc--CCcceeeccccCCcc
Confidence 4799999999988753 344689999999999987666543 311 256899999987643
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.05 E-value=0.00036 Score=71.46 Aligned_cols=57 Identities=11% Similarity=-0.001 Sum_probs=41.8
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
..|...+++|+++.. |-+.++|.++|||-||..+...+.. |.. ...+.++|+.+...
T Consensus 173 l~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~s-p~~--~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 173 LLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILS-LPS--RSLFHRAVLQSGTP 232 (542)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHS-HHH--HTTCSEEEEESCCS
T ss_pred cccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhh-hhh--hHHhhhheeecccc
Confidence 469999999998875 3344689999999999977766543 211 24688889887643
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=97.02 E-value=0.00097 Score=67.94 Aligned_cols=60 Identities=13% Similarity=0.035 Sum_probs=42.1
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
..|..++++|+++.. |-+.++|.++|||-||..+...+.. |.......+.++|+.++...
T Consensus 159 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s-~~~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 159 LLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSA-YGGKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTG-GGTCCCSSCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhc-cccccccccceeeecccccc
Confidence 469999999999875 3344689999999999876544432 21111247899999987543
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.01 E-value=0.00071 Score=68.83 Aligned_cols=56 Identities=14% Similarity=0.203 Sum_probs=41.4
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
..|...+++|+++.. |-+.++|.++|||-||..+...+.. |.. ...+.++|+.+..
T Consensus 171 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s-p~~--~~LF~raI~~SG~ 229 (532)
T d2h7ca1 171 HLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLS-PLA--KNLFHRAISESGV 229 (532)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHC-GGG--TTSCSEEEEESCC
T ss_pred cHHHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhh-hhc--cCcchhhhhhccc
Confidence 469999999998875 3344689999999999877655543 211 2568899988854
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=97.00 E-value=0.00042 Score=70.80 Aligned_cols=57 Identities=12% Similarity=0.049 Sum_probs=41.4
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
..|...+++|+++.. |-+..+|.++|||-||..+...+.. |. ....+.++|+.+...
T Consensus 167 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~s-p~--~~~lF~~aI~~Sg~~ 226 (532)
T d1ea5a_ 167 LLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILS-PG--SRDLFRRAILQSGSP 226 (532)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHC-HH--HHTTCSEEEEESCCT
T ss_pred chhHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccC-cc--chhhhhhheeecccc
Confidence 468999999999875 3344689999999999876655543 20 124688899887654
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.91 E-value=0.00082 Score=68.39 Aligned_cols=58 Identities=14% Similarity=0.087 Sum_probs=41.9
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
..|..++++|+++.. |-+..+|.++|+|-||..+...+.. |. ....+.++|+.+....
T Consensus 165 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~s-p~--~~~lf~~aI~~Sg~~~ 225 (526)
T d1p0ia_ 165 LFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLS-PG--SHSLFTRAILQSGSFN 225 (526)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHC-GG--GGGGCSEEEEESCCTT
T ss_pred ccchhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccC-Cc--chhhhhhhhccccccc
Confidence 468999999998875 3344689999999999977555443 21 1256888888876543
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=96.21 E-value=0.003 Score=64.45 Aligned_cols=59 Identities=14% Similarity=0.129 Sum_probs=40.1
Q ss_pred hccHHHHHHHHHHHhC---CCCCcEeEEEEchHHHHHH-HHHhcCC--CCCCcccccEEEEeccc
Q 011833 234 EEDVPAVMEYIRTLSK---PKDGKLLAVGHSMGGILLY-AMLSHCG--FEGKDSGFASVTTLASS 292 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~---~~~~ki~lvGhS~GG~ia~-~~a~~~p--~~~~~~~v~~lvlla~~ 292 (476)
..|...+++|+++... -+.++|.++|||-||..+. .++.... .......+.++|+.++.
T Consensus 179 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs 243 (534)
T d1llfa_ 179 LKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred hhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCc
Confidence 4689999999988753 3446899999999998554 4442211 00012358899998864
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=96.07 E-value=0.003 Score=64.64 Aligned_cols=59 Identities=17% Similarity=0.173 Sum_probs=40.6
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCC---CCcccccEEEEeccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFE---GKDSGFASVTTLASS 292 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~---~~~~~v~~lvlla~~ 292 (476)
..|..++++|+++.. |-+.++|.++|||-||..+...+.-.... .....+.++|+.++.
T Consensus 187 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~ 251 (544)
T d1thga_ 187 LHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred HHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhccccccccc
Confidence 479999999999875 33346899999999997665444321000 011468899998864
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=95.88 E-value=0.0059 Score=62.63 Aligned_cols=57 Identities=11% Similarity=0.052 Sum_probs=41.1
Q ss_pred hccHHHHHHHHHHHh---CCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEecccc
Q 011833 234 EEDVPAVMEYIRTLS---KPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSL 293 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~---~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~ 293 (476)
..|..++++|+++.. |-+.++|.|+|||-||..+...+.. |.. ...+..+++.+...
T Consensus 206 l~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~s-p~~--~~lf~~aI~~Sg~~ 265 (571)
T d1dx4a_ 206 LWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMS-PVT--RGLVKRGMMQSGTM 265 (571)
T ss_dssp HHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHC-TTT--TTSCCEEEEESCCT
T ss_pred chHHHHHHHHHHHhhhhhccCCCceEeccccCccceeeeeecc-ccc--cccccccceecccc
Confidence 469999999998875 3334689999999999977655543 311 25688888877543
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=95.75 E-value=0.014 Score=59.95 Aligned_cols=56 Identities=9% Similarity=0.105 Sum_probs=41.5
Q ss_pred hccHHHHHHHHHHHhC---CCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 234 EEDVPAVMEYIRTLSK---PKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 234 ~~Dl~a~i~~l~~~~~---~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
..|..++++|+++... -+.++|.++|||-||..+...+.. |.. ...+.++|+.+..
T Consensus 164 l~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~s-p~~--~gLF~raI~~SGs 222 (579)
T d2bcea_ 164 LWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLS-PYN--KGLIKRAISQSGV 222 (579)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHC-GGG--TTTCSEEEEESCC
T ss_pred hhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhh-hcc--cCccccceeccCC
Confidence 4689999999988753 334689999999999877655443 311 2568999999853
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=93.86 E-value=0.024 Score=52.85 Aligned_cols=37 Identities=19% Similarity=0.338 Sum_probs=26.1
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~ 273 (476)
.++...|+.+.+.. ++.++.+.|||+||.+|..++..
T Consensus 121 ~~i~~~i~~~~~~~--~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 121 DDIIKELKEVVAQN--PNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHHHHHhC--CCceEEEeccchHHHHHHHHHHH
Confidence 44555555554443 23489999999999999888765
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=93.52 E-value=0.046 Score=50.66 Aligned_cols=37 Identities=24% Similarity=0.229 Sum_probs=25.9
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~ 273 (476)
.++...++.+.+... +.+|.+.|||+||.+|..++..
T Consensus 117 ~~i~~~v~~~~~~~~--~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 117 NDYFPVVQEQLTAHP--TYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHHHHHHHCT--TCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCC--CceEEEEecccchHHHHHHHHH
Confidence 445555555544432 3489999999999999888754
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=93.50 E-value=0.041 Score=50.91 Aligned_cols=37 Identities=19% Similarity=0.273 Sum_probs=26.9
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~ 273 (476)
.++...++.+.+... +.++.+.|||+||.+|..++..
T Consensus 109 ~~i~~~i~~~~~~~~--~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 109 DQVESLVKQQASQYP--DYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCC--CcceEEeccchhHHHHHHHHHH
Confidence 455555665555543 3489999999999999888754
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=93.44 E-value=0.051 Score=50.45 Aligned_cols=53 Identities=17% Similarity=0.169 Sum_probs=33.0
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~ 292 (476)
+++...++.+.+.. ++.++.+.|||+||.+|..++...... ...+. ++..++|
T Consensus 122 ~~v~~~v~~~~~~~--~~~~i~vtGHSLGGalA~l~a~~l~~~--~~~i~-~~tFG~P 174 (269)
T d1tiba_ 122 DTLRQKVEDAVREH--PDYRVVFTGHSLGGALATVAGADLRGN--GYDID-VFSYGAP 174 (269)
T ss_dssp HHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHHTTS--SSCEE-EEEESCC
T ss_pred HHHHHHHHHHHHhC--CCcceeeeccchHHHHHHHHHHHHHhc--cCcce-EEEecCC
Confidence 45555555555543 234899999999999998888653211 23454 4444443
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=92.30 E-value=0.063 Score=49.68 Aligned_cols=37 Identities=19% Similarity=0.171 Sum_probs=25.5
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSH 273 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~ 273 (476)
.++...+..+.+... ..+|.+.|||+||.+|..++..
T Consensus 116 ~~i~~~i~~~~~~~~--~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 116 NELVATVLDQFKQYP--SYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC--CceEEEecccchHHHHHHHHHH
Confidence 344445554444433 3489999999999999887753
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=90.79 E-value=0.61 Score=46.16 Aligned_cols=63 Identities=14% Similarity=0.244 Sum_probs=49.9
Q ss_pred cccEEEEeeCCCCcCCHHHHHHHHHhcC--------CC---------------------------ceeEEEecCCCCCCC
Q 011833 403 NVPVLALAADQDLICPTEAVYETVKLIP--------EH---------------------------LVSFKVFGEPRGPHY 447 (476)
Q Consensus 403 ~vPvLii~G~~D~~vp~~~~~~~~~~l~--------~~---------------------------~~~~~v~~~~~~~~~ 447 (476)
.++|||.+|+.|.+||....+...+.++ .. +.++..+ .++
T Consensus 372 girVLIy~Gd~D~icn~~Gte~~i~~L~w~g~~~f~~~~~~~~w~~~~~~~~~~~~vaG~~~~~~nltf~~V-----~~A 446 (483)
T d1ac5a_ 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSV-----YNA 446 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEE-----TTC
T ss_pred CCEEEEEECChhhcCCCHHHHHHHHhCCCccccccccCccccccccccccccCCcEEEEEEEEeCCeEEEEE-----CCc
Confidence 5799999999999999999998888763 10 1334443 799
Q ss_pred cccccccccCCccchhHHHHHHHHhh
Q 011833 448 AHYDLVGSRLAAYQVYPCIIEFLTRH 473 (476)
Q Consensus 448 gH~~~~~~~~~~~~v~~~i~~fL~~~ 473 (476)
|| ++..+.|+..+..|..||.+.
T Consensus 447 GH---mvP~dqP~~a~~mi~~fl~~~ 469 (483)
T d1ac5a_ 447 SH---MVPFDKSLVSRGIVDIYSNDV 469 (483)
T ss_dssp CS---SHHHHCHHHHHHHHHHHTTCC
T ss_pred cc---cCcccCHHHHHHHHHHHhCCc
Confidence 99 666788999999999999864
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=86.10 E-value=0.35 Score=42.48 Aligned_cols=57 Identities=18% Similarity=0.185 Sum_probs=39.5
Q ss_pred ccHHHHHHHHHHHhCCCCCcEeEEEEchHHHHHHHHHhcCCCCCCcccccEEEEeccccc
Q 011833 235 EDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLD 294 (476)
Q Consensus 235 ~Dl~a~i~~l~~~~~~~~~ki~lvGhS~GG~ia~~~a~~~p~~~~~~~v~~lvlla~~~~ 294 (476)
.++...|....++- ++.|++|+|+|+|+.++-.++...+-. ...+|+++++++-+..
T Consensus 80 ~~~~~~i~~~a~~C--P~tkiVL~GYSQGA~V~~~~~~~l~~~-~~~~V~avvlfGDP~~ 136 (197)
T d1cexa_ 80 REMLGLFQQANTKC--PDATLIAGGYSQGAALAAASIEDLDSA-IRDKIAGTVLFGYTKN 136 (197)
T ss_dssp HHHHHHHHHHHHHC--TTCEEEEEEETHHHHHHHHHHHHSCHH-HHTTEEEEEEESCTTT
T ss_pred HHHHHHHHHHHhhC--CCCeEEEeeeccccHhhhcccccCChh-hhhhEEEEEEEeCCCC
Confidence 45555555554443 456999999999999998877654311 1257999999987653
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=82.83 E-value=0.46 Score=47.11 Aligned_cols=44 Identities=14% Similarity=0.194 Sum_probs=27.4
Q ss_pred CCcEeEEEEchHHHHHHHHHhcC------C-CCCCcccccEEEEecccccc
Q 011833 252 DGKLLAVGHSMGGILLYAMLSHC------G-FEGKDSGFASVTTLASSLDY 295 (476)
Q Consensus 252 ~~ki~lvGhS~GG~ia~~~a~~~------p-~~~~~~~v~~lvlla~~~~~ 295 (476)
..++++.|-|+||.-+-.+|... . .....-.++++.+..+..+.
T Consensus 167 ~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkGi~IGNg~~d~ 217 (483)
T d1ac5a_ 167 TRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWIDP 217 (483)
T ss_dssp GSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCCH
T ss_pred cCCeEEeecccccchHHHHHHHHHHhccccccCCCcccceeeeecCCccCh
Confidence 35899999999997655444321 0 01112358888887776543
|