Citrus Sinensis ID: 011948

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470----
MLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAASNAVKAPPKVIDNIPRMMEAAAPGLAITS
ccccEEEEEEEEccccEEEEEccccccccEEEEEccccEEEEEEccccccccccccEEEccccEEEEEcccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHccccccccccccEEEEccccccccHHHHHHHHHHHcccEEEEEEcHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccEEEEEccccHHHccccHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHccccccccccccccccHHHHHHHHHHccccccccHHHHHccccccccccHHHHHHHHHHHHHHHccHHHHHccHHHccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccc
ccccEEEEEEEcccccEEEEEEccccEEEEEEcccccccEEEHHHHHHHcccccHEEEcccccEEEcccccEEEEEcccccHcccccccccHHHHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHHHcccHHHcccccccEEEEcccccHHHHHHHHHHHHHcccccEEEEEHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHcccEEEEcccccHHHHccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHcccHHHHcccccccHHHHHHHHHHccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHccHHHHHccHHcccccccccHHHHHHHHHHHHHcccHHHHHHccccccEEcccHHHHHccHHHHcccccccHHHHHHHHHHHHHHccccccccccHHHccccccEEEEccccEEEEc
MLDGMFSFVlldtrdnsfivarDAIGITSLYIGWGLDGSIWISSElkglnddcehfeafppghlyssksgglkrwynptwyseaipstpydplVLRQAFENAVIKRLMTDVPFGVllsggldsslVASITARHLAGTKAARQWGTQLHSFCVglegspdlkYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYdvttirastpmfLMSRKIKSLGVKMVIsgegsdeifggylyfhkapnkeefHRETCHKIKALHQYDCLrankstsawglearvpfldkdfinvamaidpewkminpqegrIEKWILRKafddeerpylpkhvlyrqkeqfsdgvgyswIDGLKAHAEQHVTDKMVQnaqyifphntpltkeaYYYRMIFErffpqnsarltvpggasvACSTAKAVEWdaewannldpsgraALGVHLSAYEKQVAAsnavkappkvidniprmmeaaapglaits
MLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDvttirastpmfLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAidpewkminpqegrIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVaasnavkappkvidniPRMMEAAAPGLAITS
MLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFgvllsggldsslvasITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAASNAVKAPPKVIDNIPRMMEAAAPGLAITS
****MFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVA******************************
MLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSA*****************************PGLAI**
MLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAASNAVKAPPKVIDNIPRMMEAAAPGLAITS
*LDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAASN*VKAPPKVIDNIPRMMEAAAPGLAITS
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MLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAASNAVKAPPKVIDNIPRMMEAAAPGLAITS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query474 2.2.26 [Sep-21-2011]
P49078584 Asparagine synthetase [gl yes no 0.970 0.787 0.846 0.0
P49091586 Asparagine synthetase [gl N/A no 0.974 0.788 0.840 0.0
P31752590 Asparagine synthetase [gl N/A no 1.0 0.803 0.814 0.0
O24661586 Asparagine synthetase [gl N/A no 0.943 0.762 0.865 0.0
P49092586 Asparagine synthetase [gl N/A no 0.991 0.802 0.835 0.0
P19252583 Asparagine synthetase, ro N/A no 0.983 0.799 0.838 0.0
P49093586 Asparagine synthetase [gl N/A no 0.993 0.803 0.808 0.0
P19251586 Asparagine synthetase, no N/A no 0.968 0.783 0.826 0.0
Q43011591 Asparagine synthetase [gl yes no 0.962 0.771 0.799 0.0
Q9LFU1578 Asparagine synthetase [gl no no 0.976 0.801 0.779 0.0
>sp|P49078|ASNS1_ARATH Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Arabidopsis thaliana GN=ASN1 PE=2 SV=2 Back     alignment and function desciption
 Score =  843 bits (2177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/464 (84%), Positives = 434/464 (93%), Gaps = 4/464 (0%)

Query: 1   MLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFP 60
           MLDG+FSFVLLDTRDNSF+VARDAIG+TSLYIGWGLDGS+WISSE+KGLNDDCEHFE FP
Sbjct: 116 MLDGIFSFVLLDTRDNSFMVARDAIGVTSLYIGWGLDGSVWISSEMKGLNDDCEHFETFP 175

Query: 61  PGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGG 120
           PGH YSSK GG K+WYNP W++E++PSTPY+PL +R+AFENAVIKRLMTDVPFGVLLSGG
Sbjct: 176 PGHFYSSKLGGFKQWYNPPWFNESVPSTPYEPLAIRRAFENAVIKRLMTDVPFGVLLSGG 235

Query: 121 LDSSLVASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFT 180
           LDSSLVASITARHLAGTKAA+QWG QLHSFCVGLEGSPDLK  KEVA+YLGTVHHEFHF+
Sbjct: 236 LDSSLVASITARHLAGTKAAKQWGPQLHSFCVGLEGSPDLKAGKEVAEYLGTVHHEFHFS 295

Query: 181 VQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYF 240
           VQDGIDAIE+VIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMV+SGEG+DEIFGGYLYF
Sbjct: 296 VQDGIDAIEDVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGADEIFGGYLYF 355

Query: 241 HKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWK 300
           HKAPNK+EFH+ETC KIKALH+YDCLRANKSTSA+GLEARVPFLDKDFIN AM++DPE K
Sbjct: 356 HKAPNKKEFHQETCRKIKALHKYDCLRANKSTSAFGLEARVPFLDKDFINTAMSLDPESK 415

Query: 301 MINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTD 360
           MI P+EGRIEKW+LR+AFDDEERPYLPKH+LYRQKEQFSDGVGYSWIDGLK HA Q+V D
Sbjct: 416 MIKPEEGRIEKWVLRRAFDDEERPYLPKHILYRQKEQFSDGVGYSWIDGLKDHAAQNVND 475

Query: 361 KMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEW 420
           KM+ NA +IFPHNTP TKEAYYYRMIFERFFPQNSARLTVPGGA+VACSTAKAVEWDA W
Sbjct: 476 KMMSNAGHIFPHNTPNTKEAYYYRMIFERFFPQNSARLTVPGGATVACSTAKAVEWDASW 535

Query: 421 ANNLDPSGRAALGVHLSAYEKQVAASNAVKAPP-KVIDNIPRMM 463
           +NN+DPSGRAA+GVHLSAY+ +   + A+  PP K IDN+P MM
Sbjct: 536 SNNMDPSGRAAIGVHLSAYDGK---NVALTIPPLKAIDNMPMMM 576

Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 3EC: .EC: 5EC: .EC: 4
>sp|P49091|ASNS_BRAOL Asparagine synthetase [glutamine-hydrolyzing] OS=Brassica oleracea PE=2 SV=2 Back     alignment and function description
>sp|P31752|ASNS_ASPOF Asparagine synthetase [glutamine-hydrolyzing] OS=Asparagus officinalis PE=2 SV=2 Back     alignment and function description
>sp|O24661|ASNS_TRIVS Asparagine synthetase [glutamine-hydrolyzing] OS=Triphysaria versicolor GN=AS PE=2 SV=3 Back     alignment and function description
>sp|P49092|ASNS1_LOTJA Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Lotus japonicus GN=AS1 PE=2 SV=2 Back     alignment and function description
>sp|P19252|ASNS2_PEA Asparagine synthetase, root [glutamine-hydrolyzing] OS=Pisum sativum GN=AS2 PE=2 SV=3 Back     alignment and function description
>sp|P49093|ASNS2_LOTJA Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Lotus japonicus GN=AS2 PE=2 SV=2 Back     alignment and function description
>sp|P19251|ASNS1_PEA Asparagine synthetase, nodule [glutamine-hydrolyzing] OS=Pisum sativum GN=AS1 PE=2 SV=3 Back     alignment and function description
>sp|Q43011|ASNS2_ORYSJ Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Oryza sativa subsp. japonica GN=Os06g0265000 PE=2 SV=3 Back     alignment and function description
>sp|Q9LFU1|ASNS3_ARATH Asparagine synthetase [glutamine-hydrolyzing] 3 OS=Arabidopsis thaliana GN=ASN3 PE=2 SV=1 Back     alignment and function description

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query474
TAIR|locus:2099580584 ASN1 "glutamine-dependent aspa 0.968 0.785 0.817 3.3e-214
TAIR|locus:2177694578 ASN2 "asparagine synthetase 2" 0.970 0.795 0.763 9.1e-203
TAIR|locus:2145377578 ASN3 "asparagine synthetase 3" 0.976 0.801 0.747 1.6e-198
UNIPROTKB|P22106554 asnB [Escherichia coli K-12 (t 0.911 0.779 0.545 4.8e-126
DICTYBASE|DDB_G0286059557 asns "asparagine synthetase" [ 0.898 0.764 0.538 6.1e-126
TIGR_CMR|CPS_2794554 CPS_2794 "asparagine synthase 0.911 0.779 0.537 3.4e-125
TIGR_CMR|SO_2767554 SO_2767 "asparagine synthetase 0.909 0.777 0.533 1.9e-122
ASPGD|ASPL0000073587571 AN4401 [Emericella nidulans (t 0.586 0.486 0.615 2.8e-122
UNIPROTKB|Q9KTB2554 VC_0991 "Asparagine synthetase 0.911 0.779 0.530 3.1e-122
TIGR_CMR|VC_0991554 VC_0991 "asparagine synthetase 0.911 0.779 0.530 3.1e-122
TAIR|locus:2099580 ASN1 "glutamine-dependent asparagine synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2070 (733.7 bits), Expect = 3.3e-214, P = 3.3e-214
 Identities = 380/465 (81%), Positives = 419/465 (90%)

Query:     1 MLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFP 60
             MLDG+FSFVLLDTRDNSF+VARDAIG+TSLYIGWGLDGS+WISSE+KGLNDDCEHFE FP
Sbjct:   116 MLDGIFSFVLLDTRDNSFMVARDAIGVTSLYIGWGLDGSVWISSEMKGLNDDCEHFETFP 175

Query:    61 PGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFXXXXXXX 120
             PGH YSSK GG K+WYNP W++E++PSTPY+PL +R+AFENAVIKRLMTDVPF       
Sbjct:   176 PGHFYSSKLGGFKQWYNPPWFNESVPSTPYEPLAIRRAFENAVIKRLMTDVPFGVLLSGG 235

Query:   121 XXXXXXXXITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFT 180
                     ITARHLAGTKAA+QWG QLHSFCVGLEGSPDLK  KEVA+YLGTVHHEFHF+
Sbjct:   236 LDSSLVASITARHLAGTKAAKQWGPQLHSFCVGLEGSPDLKAGKEVAEYLGTVHHEFHFS 295

Query:   181 VQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYF 240
             VQDGIDAIE+VIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMV+SGEG+DEIFGGYLYF
Sbjct:   296 VQDGIDAIEDVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGADEIFGGYLYF 355

Query:   241 HKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWK 300
             HKAPNK+EFH+ETC KIKALH+YDCLRANKSTSA+GLEARVPFLDKDFIN AM++DPE K
Sbjct:   356 HKAPNKKEFHQETCRKIKALHKYDCLRANKSTSAFGLEARVPFLDKDFINTAMSLDPESK 415

Query:   301 MINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTD 360
             MI P+EGRIEKW+LR+AFDDEERPYLPKH+LYRQKEQFSDGVGYSWIDGLK HA Q+V D
Sbjct:   416 MIKPEEGRIEKWVLRRAFDDEERPYLPKHILYRQKEQFSDGVGYSWIDGLKDHAAQNVND 475

Query:   361 KMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEW 420
             KM+ NA +IFPHNTP TKEAYYYRMIFERFFPQNSARLTVPGGA+VACSTAKAVEWDA W
Sbjct:   476 KMMSNAGHIFPHNTPNTKEAYYYRMIFERFFPQNSARLTVPGGATVACSTAKAVEWDASW 535

Query:   421 ANNLDPSGRAALGVHLSAYE-KQVAASNAVKAPP-KVIDNIPRMM 463
             +NN+DPSGRAA+GVHLSAY+ K VA +     PP K IDN+P MM
Sbjct:   536 SNNMDPSGRAAIGVHLSAYDGKNVALT----IPPLKAIDNMPMMM 576
GO:0004066 "asparagine synthase (glutamine-hydrolyzing) activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0009063 "cellular amino acid catabolic process" evidence=TAS
GO:0006529 "asparagine biosynthetic process" evidence=IGI
GO:0043617 "cellular response to sucrose starvation" evidence=IEP
GO:0009744 "response to sucrose stimulus" evidence=IEP;RCA
GO:0009749 "response to glucose stimulus" evidence=IEP
GO:0009750 "response to fructose stimulus" evidence=IEP;RCA
GO:0009646 "response to absence of light" evidence=TAS
TAIR|locus:2177694 ASN2 "asparagine synthetase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145377 ASN3 "asparagine synthetase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P22106 asnB [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0286059 asns "asparagine synthetase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_2794 CPS_2794 "asparagine synthase (glutamine-hydrolyzing)" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|SO_2767 SO_2767 "asparagine synthetase B, glutamine-hydrolyzing" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
ASPGD|ASPL0000073587 AN4401 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KTB2 VC_0991 "Asparagine synthetase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_0991 VC_0991 "asparagine synthetase B, glutamine-hydrolyzing" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O24661ASNS_TRIVS6, ., 3, ., 5, ., 40.86570.94300.7627N/Ano
P49089ASNS1_YEAST6, ., 3, ., 5, ., 40.53240.87970.7290yesno
Q9LFU1ASNS3_ARATH6, ., 3, ., 5, ., 40.77960.97670.8010nono
P31752ASNS_ASPOF6, ., 3, ., 5, ., 40.81471.00.8033N/Ano
Q54MB4ASNS_DICDI6, ., 3, ., 5, ., 40.56730.89870.7648yesno
P49078ASNS1_ARATH6, ., 3, ., 5, ., 40.84690.97040.7876yesno
Q43011ASNS2_ORYSJ6, ., 3, ., 5, ., 40.79910.96200.7715yesno
P19251ASNS1_PEA6, ., 3, ., 5, ., 40.82600.96830.7832N/Ano
P19252ASNS2_PEA6, ., 3, ., 5, ., 40.83890.98310.7993N/Ano
P78753ASNS_SCHPO6, ., 3, ., 5, ., 40.53610.88600.7540yesno
P49092ASNS1_LOTJA6, ., 3, ., 5, ., 40.83570.99150.8020N/Ano
P49093ASNS2_LOTJA6, ., 3, ., 5, ., 40.80800.99360.8037N/Ano
P49091ASNS_BRAOL6, ., 3, ., 5, ., 40.84050.97460.7883N/Ano
P49094ASNS_MAIZE6, ., 3, ., 5, ., 40.76450.93880.7593N/Ano
O24338ASNS_SANAU6, ., 3, ., 5, ., 40.86510.82910.7485N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.3.50.976
3rd Layer6.3.5.40.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_IX3026
asparagine synthase (glutamine-hydrolyzing) (EC-6.3.5.4) (590 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_fgenesh4_pm.C_LG_XVIII0241
SubName- Full=Putative uncharacterized protein; (407 aa)
     •• 0.967
gw1.XIV.3012.1
aspartate transaminase (EC-2.6.1.1) (403 aa)
     •• 0.967
estExt_fgenesh4_pg.C_LG_VI1672
aspartate transaminase (EC-2.6.1.1) (449 aa)
     •• 0.967
grail3.0013044701
aspartate transaminase (EC-2.6.1.1) (466 aa)
     •• 0.966
estExt_fgenesh4_pm.C_LG_XVIII0158
aspartate transaminase (EC-2.6.1.1) (466 aa)
     •• 0.966
gw1.VI.2755.1
aspartate transaminase (EC-2.6.1.1) (397 aa)
     •• 0.966
estExt_fgenesh4_pg.C_LG_VI1671
aspartate transaminase (EC-2.6.1.1) (442 aa)
     •• 0.966
eugene3.00012554
aspartate carbamoyltransferase (EC-2.1.3.2) (332 aa)
     •• 0.918
estExt_fgenesh4_pg.C_LG_XVI0748
adenylosuccinate synthase (EC-6.3.4.4); Plays an important role in the de novo pathway of purin [...] (491 aa)
   • •• 0.915
gw1.X.3427.1
hypothetical protein (424 aa)
   • •• 0.913

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query474
PLN02549578 PLN02549, PLN02549, asparagine synthase (glutamine 0.0
PTZ00077586 PTZ00077, PTZ00077, asparagine synthetase-like pro 0.0
PRK09431554 PRK09431, asnB, asparagine synthetase B; Provision 0.0
TIGR01536466 TIGR01536, asn_synth_AEB, asparagine synthase (glu 1e-109
COG0367542 COG0367, AsnB, Asparagine synthase (glutamine-hydr 1e-102
cd01991269 cd01991, Asn_Synthase_B_C, The C-terminal domain o 3e-81
pfam00733195 pfam00733, Asn_synthase, Asparagine synthase 4e-74
TIGR03104589 TIGR03104, trio_amidotrans, asparagine synthase fa 2e-27
TIGR03108628 TIGR03108, eps_aminotran_1, exosortase A system-as 5e-19
cd00712220 cd00712, AsnB, Glutamine amidotransferases class-I 3e-16
cd00352220 cd00352, Gn_AT_II, Glutamine amidotransferases cla 3e-16
pfam13537120 pfam13537, GATase_7, Glutamine amidotransferase do 9e-14
cd01910224 cd01910, Wali7, This domain is present in Wali7, a 9e-10
pfam12481228 pfam12481, DUF3700, Aluminium induced protein 1e-09
TIGR03108628 TIGR03108, eps_aminotran_1, exosortase A system-as 5e-07
pfam13522130 pfam13522, GATase_6, Glutamine amidotransferase do 2e-04
cd01986103 cd01986, Alpha_ANH_like, Adenine nucleotide alpha 0.002
>gnl|CDD|178164 PLN02549, PLN02549, asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information 
 Score =  937 bits (2424), Expect = 0.0
 Identities = 386/463 (83%), Positives = 419/463 (90%)

Query: 1   MLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFP 60
           MLDGMFSFVLLDTRDNSFI ARD IGIT LYIGWGLDGS+W +SE+K L DDCE FE FP
Sbjct: 116 MLDGMFSFVLLDTRDNSFIAARDHIGITPLYIGWGLDGSVWFASEMKALCDDCERFEEFP 175

Query: 61  PGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGG 120
           PGH YSSK+GG +RWYNP W+SE+IPSTPYDPLVLR+AFE AVIKRLMTDVPFGVLLSGG
Sbjct: 176 PGHYYSSKAGGFRRWYNPPWFSESIPSTPYDPLVLREAFEKAVIKRLMTDVPFGVLLSGG 235

Query: 121 LDSSLVASITARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFT 180
           LDSSLVASI ARHLA TKAARQWG QLHSFCVGLEGSPDLK A+EVADYLGTVHHEFHFT
Sbjct: 236 LDSSLVASIAARHLAETKAARQWGQQLHSFCVGLEGSPDLKAAREVADYLGTVHHEFHFT 295

Query: 181 VQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYF 240
           VQ+GIDAIE+VIYH+ETYDVTTIRASTPMFLMSRKIKSLGVKMV+SGEGSDEIFGGYLYF
Sbjct: 296 VQEGIDAIEDVIYHLETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYF 355

Query: 241 HKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWK 300
           HKAPNKEEFH+ETC KIKALHQYDCLRANKSTSAWGLEARVPFLDK+FI+VAM+IDPEWK
Sbjct: 356 HKAPNKEEFHKETCRKIKALHQYDCLRANKSTSAWGLEARVPFLDKEFIDVAMSIDPEWK 415

Query: 301 MINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTD 360
           MI P EGRIEKW+LRKAFDDEE PYLPKH+L+RQKEQFSDGVGYSWIDGLKAHAE+HV+D
Sbjct: 416 MIRPGEGRIEKWVLRKAFDDEEDPYLPKHILWRQKEQFSDGVGYSWIDGLKAHAEKHVSD 475

Query: 361 KMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAEW 420
           +M  NA + +PHNTP TKEAYYYRMIFE+ FPQ++ARLTVPGG SVACSTAKAVEWDA W
Sbjct: 476 EMFANASFRYPHNTPTTKEAYYYRMIFEKHFPQDAARLTVPGGPSVACSTAKAVEWDAAW 535

Query: 421 ANNLDPSGRAALGVHLSAYEKQVAASNAVKAPPKVIDNIPRMM 463
           + NLDPSGRAALGVH++AYE+ VAA  A   P       P + 
Sbjct: 536 SKNLDPSGRAALGVHVAAYEEDVAADGAPAVPKAKKSKAPAIG 578

Length = 578
>gnl|CDD|185431 PTZ00077, PTZ00077, asparagine synthetase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|236513 PRK09431, asnB, asparagine synthetase B; Provisional Back     alignment and domain information
>gnl|CDD|233454 TIGR01536, asn_synth_AEB, asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>gnl|CDD|223444 COG0367, AsnB, Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|238949 cd01991, Asn_Synthase_B_C, The C-terminal domain of Asparagine Synthase B Back     alignment and domain information
>gnl|CDD|216090 pfam00733, Asn_synthase, Asparagine synthase Back     alignment and domain information
>gnl|CDD|234108 TIGR03104, trio_amidotrans, asparagine synthase family amidotransferase Back     alignment and domain information
>gnl|CDD|132152 TIGR03108, eps_aminotran_1, exosortase A system-associated amidotransferase 1 Back     alignment and domain information
>gnl|CDD|238364 cd00712, AsnB, Glutamine amidotransferases class-II (GATase) asparagine synthase_B type Back     alignment and domain information
>gnl|CDD|238212 cd00352, Gn_AT_II, Glutamine amidotransferases class-II (GATase) Back     alignment and domain information
>gnl|CDD|222208 pfam13537, GATase_7, Glutamine amidotransferase domain Back     alignment and domain information
>gnl|CDD|238891 cd01910, Wali7, This domain is present in Wali7, a protein of unknown function, expressed in wheat and induced by aluminum Back     alignment and domain information
>gnl|CDD|221596 pfam12481, DUF3700, Aluminium induced protein Back     alignment and domain information
>gnl|CDD|132152 TIGR03108, eps_aminotran_1, exosortase A system-associated amidotransferase 1 Back     alignment and domain information
>gnl|CDD|222195 pfam13522, GATase_6, Glutamine amidotransferase domain Back     alignment and domain information
>gnl|CDD|238944 cd01986, Alpha_ANH_like, Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases and ATP sulphurylases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 474
KOG0571543 consensus Asparagine synthase (glutamine-hydrolyzi 100.0
PLN02549578 asparagine synthase (glutamine-hydrolyzing) 100.0
PTZ00077586 asparagine synthetase-like protein; Provisional 100.0
PRK09431554 asnB asparagine synthetase B; Provisional 100.0
TIGR03104589 trio_amidotrans asparagine synthase family amidotr 100.0
TIGR03108628 eps_aminotran_1 exosortase 1 system-associated ami 100.0
COG0367542 AsnB Asparagine synthase (glutamine-hydrolyzing) [ 100.0
TIGR01536467 asn_synth_AEB asparagine synthase (glutamine-hydro 100.0
cd01991269 Asn_Synthase_B_C The C-terminal domain of Asparagi 100.0
PF00733255 Asn_synthase: Asparagine synthase; InterPro: IPR00 100.0
KOG0573520 consensus Asparagine synthase [Amino acid transpor 99.97
cd01910224 Wali7 This domain is present in Wali7, a protein o 99.83
cd01909199 betaLS_CarA_N Glutamine amidotransferases class-II 99.77
cd00712220 AsnB Glutamine amidotransferases class-II (GATase) 99.62
cd01996154 Alpha_ANH_like_III This is a subfamily of Adenine 99.48
TIGR03573343 WbuX N-acetyl sugar amidotransferase. This enzyme 99.44
PF13537125 GATase_7: Glutamine amidotransferase domain; PDB: 99.42
cd03766181 Gn_AT_II_novel Gn_AT_II_novel. This asparagine syn 99.2
cd00715252 GPATase_N Glutamine amidotransferases class-II (GN 99.15
PRK08341442 amidophosphoribosyltransferase; Provisional 99.14
PRK06388474 amidophosphoribosyltransferase; Provisional 99.08
PRK09123479 amidophosphoribosyltransferase; Provisional 99.07
PF12481228 DUF3700: Aluminium induced protein ; InterPro: IPR 99.06
PRK07631475 amidophosphoribosyltransferase; Provisional 99.04
TIGR00268252 conserved hypothetical protein TIGR00268. The N-te 99.04
PRK07847510 amidophosphoribosyltransferase; Provisional 99.04
PRK08525445 amidophosphoribosyltransferase; Provisional 99.03
PRK07272484 amidophosphoribosyltransferase; Provisional 99.02
cd00553248 NAD_synthase NAD+ synthase is a homodimer, which c 99.01
cd00714215 GFAT Glutamine amidotransferases class-II (Gn-AT)_ 99.0
TIGR00552250 nadE NAD+ synthetase. NAD+ synthetase is a nearly 98.98
PRK00876326 nadE NAD synthetase; Reviewed 98.98
cd00352220 Gn_AT_II Glutamine amidotransferases class-II (GAT 98.97
PLN02440479 amidophosphoribosyltransferase 98.96
cd01907249 GlxB Glutamine amidotransferases class-II (Gn-AT)_ 98.95
PRK06781471 amidophosphoribosyltransferase; Provisional 98.94
PRK14561194 hypothetical protein; Provisional 98.94
PRK13980265 NAD synthetase; Provisional 98.93
PRK07349500 amidophosphoribosyltransferase; Provisional 98.93
TIGR01134442 purF amidophosphoribosyltransferase. Alternate nam 98.88
COG1606269 ATP-utilizing enzymes of the PP-loop superfamily [ 98.87
cd01990202 Alpha_ANH_like_I This is a subfamily of Adenine nu 98.86
PRK00331604 glucosamine--fructose-6-phosphate aminotransferase 98.86
PRK05793469 amidophosphoribosyltransferase; Provisional 98.85
PRK09246501 amidophosphoribosyltransferase; Provisional 98.84
TIGR01135607 glmS glucosamine--fructose-6-phosphate aminotransf 98.79
PRK00143346 mnmA tRNA-specific 2-thiouridylase MnmA; Reviewed 98.74
cd01993185 Alpha_ANH_like_II This is a subfamily of Adenine n 98.73
cd01998349 tRNA_Me_trans tRNA methyl transferase. This family 98.71
PRK04527400 argininosuccinate synthase; Provisional 98.65
COG0482356 TrmU Predicted tRNA(5-methylaminomethyl-2-thiourid 98.64
PF06508209 QueC: Queuosine biosynthesis protein QueC; InterPr 98.63
PTZ00323294 NAD+ synthase; Provisional 98.63
PRK11106231 queuosine biosynthesis protein QueC; Provisional 98.63
PTZ00295640 glucosamine-fructose-6-phosphate aminotransferase; 98.62
PRK14665360 mnmA tRNA-specific 2-thiouridylase MnmA; Provision 98.61
PF03054356 tRNA_Me_trans: tRNA methyl transferase; InterPro: 98.56
COG0603222 Predicted PP-loop superfamily ATPase [General func 98.55
PF02540242 NAD_synthase: NAD synthase; InterPro: IPR022310 NA 98.51
PRK00509399 argininosuccinate synthase; Provisional 98.5
PRK13981540 NAD synthetase; Provisional 98.5
TIGR00420352 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-me 98.47
PRK14664362 tRNA-specific 2-thiouridylase MnmA; Provisional 98.45
TIGR00364201 exsB protein. This protein family is represented b 98.45
TIGR00884311 guaA_Cterm GMP synthase (glutamine-hydrolyzing), C 98.45
cd01712177 ThiI ThiI is required for thiazole synthesis in th 98.41
PRK08349198 hypothetical protein; Validated 98.37
PRK00919307 GMP synthase subunit B; Validated 98.36
cd01999385 Argininosuccinate_Synthase Argininosuccinate synth 98.36
PRK00768268 nadE NAD synthetase; Reviewed 98.35
PLN00200404 argininosuccinate synthase; Provisional 98.32
TIGR02432189 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-t 98.32
PRK13820394 argininosuccinate synthase; Provisional 98.31
PRK10696258 tRNA 2-thiocytidine biosynthesis protein TtcA; Pro 98.26
cd01986103 Alpha_ANH_like Adenine nucleotide alpha hydrolases 98.25
COG0037298 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle 98.2
cd00713413 GltS Glutamine amidotransferases class-II (Gn-AT), 98.19
PRK00074511 guaA GMP synthase; Reviewed 98.19
TIGR00032394 argG argininosuccinate synthase. argG in bacteria, 98.16
cd01992185 PP-ATPase N-terminal domain of predicted ATPase of 98.14
cd01997295 GMP_synthase_C The C-terminal domain of GMP synthe 98.13
PRK01565394 thiamine biosynthesis protein ThiI; Provisional 98.1
PLN02347536 GMP synthetase 98.08
cd01995169 ExsB ExsB is a transcription regulator related pro 98.06
PRK02628679 nadE NAD synthetase; Reviewed 98.02
KOG2805377 consensus tRNA (5-methylaminomethyl-2-thiouridylat 97.99
COG2117198 Predicted subunit of tRNA(5-methylaminomethyl-2-th 97.97
TIGR03679218 arCOG00187 arCOG00187 universal archaeal metal-bin 97.96
PF00764388 Arginosuc_synth: Arginosuccinate synthase; InterPr 97.96
TIGR00342371 thiazole biosynthesis/tRNA modification protein Th 97.95
PTZ00394670 glucosamine-fructose-6-phosphate aminotransferase; 97.95
PRK08384381 thiamine biosynthesis protein ThiI; Provisional 97.93
cd01994194 Alpha_ANH_like_IV This is a subfamily of Adenine n 97.93
PRK05370447 argininosuccinate synthase; Validated 97.93
PF01171182 ATP_bind_3: PP-loop family; InterPro: IPR011063 Th 97.92
cd01713173 PAPS_reductase This domain is found in phosphoaden 97.83
PLN02981680 glucosamine:fructose-6-phosphate aminotransferase 97.83
COG0171268 NadE NAD synthase [Coenzyme metabolism] 97.76
PRK05253301 sulfate adenylyltransferase subunit 2; Provisional 97.73
PRK01269482 tRNA s(4)U8 sulfurtransferase; Provisional 97.69
COG0034470 PurF Glutamine phosphoribosylpyrophosphate amidotr 97.67
COG1365255 Predicted ATPase (PP-loop superfamily) [General fu 97.63
COG0137403 ArgG Argininosuccinate synthase [Amino acid transp 97.63
PF02568197 ThiI: Thiamine biosynthesis protein (ThiI); InterP 97.62
PRK08576438 hypothetical protein; Provisional 97.61
PRK10660436 tilS tRNA(Ile)-lysidine synthetase; Provisional 97.52
COG0367542 AsnB Asparagine synthase (glutamine-hydrolyzing) [ 97.51
KOG0572474 consensus Glutamine phosphoribosylpyrophosphate am 97.47
PLN02339700 NAD+ synthase (glutamine-hydrolysing) 97.47
PRK11750 1485 gltB glutamate synthase subunit alpha; Provisional 96.97
TIGR02039294 CysD sulfate adenylyltransferase, small subunit. I 96.91
COG0519315 GuaA GMP synthase, PP-ATPase domain/subunit [Nucle 96.76
PRK02090241 phosphoadenosine phosphosulfate reductase; Provisi 96.67
cd01908257 YafJ Glutamine amidotransferases class-II (Gn-AT)_ 96.64
TIGR03442251 conserved hypothetical protein TIGR03442. Members 96.55
PF01507174 PAPS_reduct: Phosphoadenosine phosphosulfate reduc 96.42
PRK08557417 hypothetical protein; Provisional 96.39
COG0301383 ThiI Thiamine biosynthesis ATP pyrophosphatase [Co 96.22
TIGR00289222 conserved hypothetical protein TIGR00289. Homologo 96.15
KOG1706412 consensus Argininosuccinate synthase [Amino acid t 96.09
PRK12563312 sulfate adenylyltransferase subunit 2; Provisional 96.04
PRK13794479 hypothetical protein; Provisional 96.0
PRK13795636 hypothetical protein; Provisional 95.95
cd0198486 AANH_like Adenine nucleotide alpha hydrolases supe 95.79
TIGR00434212 cysH phosophoadenylyl-sulfate reductase (thioredox 94.45
KOG1622552 consensus GMP synthase [Nucleotide transport and m 94.43
TIGR03183447 DNA_S_dndC putative sulfurtransferase DndC. Member 94.21
COG0449597 GlmS Glucosamine 6-phosphate synthetase, contains 94.2
TIGR02057226 PAPS_reductase phosphoadenosine phosphosulfate red 93.95
PRK06850507 hypothetical protein; Provisional 93.86
PF09147201 DUF1933: Domain of unknown function (DUF1933); Int 93.77
COG0175261 CysH 3'-phosphoadenosine 5'-phosphosulfate sulfotr 93.17
COG3969407 Predicted phosphoadenosine phosphosulfate sulfotra 92.75
COG2102223 Predicted ATPases of PP-loop superfamily [General 92.44
PF01902218 ATP_bind_4: ATP-binding region; InterPro: IPR00276 91.42
TIGR00290223 MJ0570_dom MJ0570-related uncharacterized domain. 91.15
KOG2303706 consensus Predicted NAD synthase, contains CN hydr 89.26
>KOG0571 consensus Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=6.5e-117  Score=871.81  Aligned_cols=424  Identities=68%  Similarity=1.148  Sum_probs=402.1

Q ss_pred             CcceEEEEEEEECCCCEEEEEeccCCCceEEEEEecCceEEEecCccchhcccCcceEeCCCcEEEecCCeeEEeeCCCC
Q 011948            1 MLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTW   80 (474)
Q Consensus         1 ~L~G~FAf~i~D~~~~~l~laRD~~G~kPLyy~~~~~g~~~faSeik~L~~~~~~I~~lpPG~~l~~~~~~~~~y~~p~~   80 (474)
                      .|+|||||+++|..+++++++||++|++||||+++.++.++||||+|+|...|+.|..+||||+++.+.+++.||++|.|
T Consensus       116 ~LDG~Fafvl~d~~~~kv~~aRDpiGv~~lY~g~~~~gs~~~aSe~k~l~d~C~~i~~fpPgh~y~~~~~~~~r~f~p~w  195 (543)
T KOG0571|consen  116 MLDGVFAFVLLDTKDDKVVAARDPIGVTPLYYGWDSDGSVYFASEMKCLEDDCEKIESFPPGHYYTSKTGKLTRYFNPEW  195 (543)
T ss_pred             HhhhheEEEEecCCCCeEEeccCCcCceeeEEEecCCCcEEEeeehhhhhhhhhceeecCCcceeecccccccCCCCchh
Confidence            48999999999999999999999999999999999899999999999999999999999999999999889999999999


Q ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHhhccCCCEEEecCCcccHHHHHHHHHHhhcccccccccCcceeEEeecCCCCCcH
Q 011948           81 YSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLAGTKAARQWGTQLHSFCVGLEGSPDL  160 (474)
Q Consensus        81 ~~~~~~~~~~~~~~lr~~L~~AV~~rl~sd~pvgv~LSGGLDSS~Iaala~~~~~~~~~~~~~~~~l~tftig~~~~~D~  160 (474)
                      .....|+.+.+...+|+.|++||++|||+|+|+||+||||||||+||+++++.+++.+.  +.+.++++|+||++++||+
T Consensus       196 ~~~~~~s~p~d~~~~r~~~~~aV~KRLM~d~p~GvLLSGGLDSSLvAsia~R~lk~~~~--~~~~~lhsFaIGle~SPDL  273 (543)
T KOG0571|consen  196 FDENIPSTPLDYLALRHTLEKAVRKRLMTDVPFGVLLSGGLDSSLVASIAARELKKAQA--ARGSKLHSFAIGLEDSPDL  273 (543)
T ss_pred             hhccCCCCcccHHHHHHHHHHHHHHHhhccCceeEEeeCCchHHHHHHHHHHHHHHhhh--hcCCCceEEEecCCCChhH
Confidence            88777777777788999999999999999999999999999999999999998865321  2245899999999999999


Q ss_pred             HHHHHHHHHhCCceEEEEeChhhhHHhHHHHHHhhccCCcccccchHHHHHHHHHHHhCCCcEEEEcCchhhhccCCchh
Q 011948          161 KYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYF  240 (474)
Q Consensus       161 ~~A~~vA~~lg~~h~~i~~~~~~~~~~l~~~i~~le~~~~~~i~~~~~~y~l~~~a~~~G~~vvLsG~GgDElfgGY~~~  240 (474)
                      ..||+||+++|+.||++.|+.++.+++|+++|+|+|+||+++||+++|||+++|+++++|+||||||||+||+||||.||
T Consensus       274 ~aarkVAd~igt~Hhe~~ft~qegidal~eVI~hLETYDvttIRastpmyLlsr~Ikk~gvkmvlSGEGsDEifggYlYf  353 (543)
T KOG0571|consen  274 LAARKVADFIGTIHHEHTFTIQEGIDALDEVIYHLETYDVTTIRASTPMYLLSRKIKKLGVKMVLSGEGSDEIFGGYLYF  353 (543)
T ss_pred             HHHHHHHHHhCCcceEEEEcHHHHHHHHHHHheeeeccccceEecCCchHHHHHHHHhcceEEEEecCCchhhhcceeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCChhHHHHHHHHHHHhhcchhhhhcccccccCCceeecccCCHHHHHHHHcCCccccccCCCCCccchHHHHHhhcc
Q 011948          241 HKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDD  320 (474)
Q Consensus       241 ~~~p~~~~~~~e~~~~l~~l~~~d~lr~dr~~~a~glE~R~PfLD~~vve~a~slP~~~k~~~~~~~~~~K~lLR~a~~~  320 (474)
                      +++|+.++||+|++|+++.||.+||||+||++|+||+|+|+||||++|+++|+||||++|+.....++++||+||+||.+
T Consensus       354 h~APs~~~fh~E~~rrvk~Lh~~DcLRankST~a~GlE~RVPFLDk~F~~~~~sldPe~K~~k~~~~r~eK~vlrsafd~  433 (543)
T KOG0571|consen  354 HKAPSAEEFHEESVRRVKHLHLYDCLRANKSTMAHGLEARVPFLDKRFLELAMSLDPEEKMIKPKEGRIEKYVLRSAFDT  433 (543)
T ss_pred             ecCCCHHHHHHHHHHHHHHHHHHHHhhcCccccccceeeecccccHHHHHHHhcCChhHhcCCcchhhHHHHHHHhhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999998755578999999999999


Q ss_pred             CCCCCCChhhhhcccCCCCCcchhhhHHHHHHHHHHhhccHHHHhccccCCCCCcchhHHhHHHHHHHHhCCcccccccc
Q 011948          321 EERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTV  400 (474)
Q Consensus       321 ~~~~~LP~~i~~R~K~~f~~~~~~~w~~~l~~~~~~~l~d~~l~~~~~~~~~~~~~~ke~~~~~~~f~~~~~~~~~~~~~  400 (474)
                      .+.|+||++|+||+|++|++++|++|+++|+++++..++|.+++++...+|+|||.|||+||||+||+++||++.++.+|
T Consensus       434 ~~~pyLP~eilwrqkeqfsdgVgySwid~L~d~~e~~isd~m~a~a~~~fp~ntP~TkEayyYR~iFe~~fp~~~~a~~v  513 (543)
T KOG0571|consen  434 TEKPYLPDEILWRQKEQFSDGVGYSWIDGLKDHAEKQISDAMFANAAAEFPDNTPTTKEAYYYRQIFERFFPQKTAADTV  513 (543)
T ss_pred             cCCCcChHHHHHHHHhhhccccchHHHHHHHHHHHHhcCHHHHhChHhhCCCCCCCchhHHHHHHHHHHHCCcchhhhhH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999997665555


Q ss_pred             ccccccccccchhhhchH--hhhcCCCCCchhHHHhhHHHhh
Q 011948          401 PGGASVACSTAKAVEWDA--EWANNLDPSGRAALGVHLSAYE  440 (474)
Q Consensus       401 ~~~~~~~c~~~~~~~w~~--~~~~~~~~~~r~~~~~~~~~~~  440 (474)
                      .             +|+|  +|+++.|||||++. +|.+++.
T Consensus       514 ~-------------~wvp~a~W~~~~Dpsgr~~~-~h~~~~~  541 (543)
T KOG0571|consen  514 H-------------KWVPKAKWGCAEDPSGRAAL-VHEKAAV  541 (543)
T ss_pred             H-------------hhcchhhccCCCCccchhHH-HHHhhhc
Confidence            3             7999  89999999999765 9988874

>PLN02549 asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>PTZ00077 asparagine synthetase-like protein; Provisional Back     alignment and domain information
>PRK09431 asnB asparagine synthetase B; Provisional Back     alignment and domain information
>TIGR03104 trio_amidotrans asparagine synthase family amidotransferase Back     alignment and domain information
>TIGR03108 eps_aminotran_1 exosortase 1 system-associated amidotransferase 1 Back     alignment and domain information
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>cd01991 Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B Back     alignment and domain information
>PF00733 Asn_synthase: Asparagine synthase; InterPro: IPR001962 This domain is always found associated with (IPR000583 from INTERPRO) Back     alignment and domain information
>KOG0573 consensus Asparagine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>cd01910 Wali7 This domain is present in Wali7, a protein of unknown function, expressed in wheat and induced by aluminum Back     alignment and domain information
>cd01909 betaLS_CarA_N Glutamine amidotransferases class-II (GATase) asparagine synthase_betaLS-type Back     alignment and domain information
>cd00712 AsnB Glutamine amidotransferases class-II (GATase) asparagine synthase_B type Back     alignment and domain information
>cd01996 Alpha_ANH_like_III This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>TIGR03573 WbuX N-acetyl sugar amidotransferase Back     alignment and domain information
>PF13537 GATase_7: Glutamine amidotransferase domain; PDB: 1JGT_A 1M1Z_B 1MB9_B 1MBZ_B 1MC1_A Back     alignment and domain information
>cd03766 Gn_AT_II_novel Gn_AT_II_novel Back     alignment and domain information
>cd00715 GPATase_N Glutamine amidotransferases class-II (GN-AT)_GPAT- type Back     alignment and domain information
>PRK08341 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK06388 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK09123 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PF12481 DUF3700: Aluminium induced protein ; InterPro: IPR024286 This entry represents a domain found in plant proteins that is approximately 120 amino acids in length Back     alignment and domain information
>PRK07631 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>TIGR00268 conserved hypothetical protein TIGR00268 Back     alignment and domain information
>PRK07847 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK08525 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07272 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>cd00553 NAD_synthase NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD) Back     alignment and domain information
>cd00714 GFAT Glutamine amidotransferases class-II (Gn-AT)_GFAT-type Back     alignment and domain information
>TIGR00552 nadE NAD+ synthetase Back     alignment and domain information
>PRK00876 nadE NAD synthetase; Reviewed Back     alignment and domain information
>cd00352 Gn_AT_II Glutamine amidotransferases class-II (GATase) Back     alignment and domain information
>PLN02440 amidophosphoribosyltransferase Back     alignment and domain information
>cd01907 GlxB Glutamine amidotransferases class-II (Gn-AT)_GlxB-type Back     alignment and domain information
>PRK06781 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK14561 hypothetical protein; Provisional Back     alignment and domain information
>PRK13980 NAD synthetase; Provisional Back     alignment and domain information
>PRK07349 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>TIGR01134 purF amidophosphoribosyltransferase Back     alignment and domain information
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only] Back     alignment and domain information
>cd01990 Alpha_ANH_like_I This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>PRK00331 glucosamine--fructose-6-phosphate aminotransferase; Reviewed Back     alignment and domain information
>PRK05793 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK09246 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>TIGR01135 glmS glucosamine--fructose-6-phosphate aminotransferase (isomerizing) Back     alignment and domain information
>PRK00143 mnmA tRNA-specific 2-thiouridylase MnmA; Reviewed Back     alignment and domain information
>cd01993 Alpha_ANH_like_II This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>cd01998 tRNA_Me_trans tRNA methyl transferase Back     alignment and domain information
>PRK04527 argininosuccinate synthase; Provisional Back     alignment and domain information
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF06508 QueC: Queuosine biosynthesis protein QueC; InterPro: IPR018317 This protein family is represented by a single member in nearly every completed large (> 1000 genes) prokaryotic genome Back     alignment and domain information
>PTZ00323 NAD+ synthase; Provisional Back     alignment and domain information
>PRK11106 queuosine biosynthesis protein QueC; Provisional Back     alignment and domain information
>PTZ00295 glucosamine-fructose-6-phosphate aminotransferase; Provisional Back     alignment and domain information
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional Back     alignment and domain information
>PF03054 tRNA_Me_trans: tRNA methyl transferase; InterPro: IPR004506 tRNA-specific 2-thiouridylase catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 Back     alignment and domain information
>COG0603 Predicted PP-loop superfamily ATPase [General function prediction only] Back     alignment and domain information
>PF02540 NAD_synthase: NAD synthase; InterPro: IPR022310 NAD+ synthase (6 Back     alignment and domain information
>PRK00509 argininosuccinate synthase; Provisional Back     alignment and domain information
>PRK13981 NAD synthetase; Provisional Back     alignment and domain information
>TIGR00420 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Back     alignment and domain information
>PRK14664 tRNA-specific 2-thiouridylase MnmA; Provisional Back     alignment and domain information
>TIGR00364 exsB protein Back     alignment and domain information
>TIGR00884 guaA_Cterm GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit Back     alignment and domain information
>cd01712 ThiI ThiI is required for thiazole synthesis in the thiamine biosynthesis pathway Back     alignment and domain information
>PRK08349 hypothetical protein; Validated Back     alignment and domain information
>PRK00919 GMP synthase subunit B; Validated Back     alignment and domain information
>cd01999 Argininosuccinate_Synthase Argininosuccinate synthase Back     alignment and domain information
>PRK00768 nadE NAD synthetase; Reviewed Back     alignment and domain information
>PLN00200 argininosuccinate synthase; Provisional Back     alignment and domain information
>TIGR02432 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-terminal domain Back     alignment and domain information
>PRK13820 argininosuccinate synthase; Provisional Back     alignment and domain information
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional Back     alignment and domain information
>cd01986 Alpha_ANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases and ATP sulphurylases Back     alignment and domain information
>COG0037 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>cd00713 GltS Glutamine amidotransferases class-II (Gn-AT), glutamate synthase (GltS)-type Back     alignment and domain information
>PRK00074 guaA GMP synthase; Reviewed Back     alignment and domain information
>TIGR00032 argG argininosuccinate synthase Back     alignment and domain information
>cd01992 PP-ATPase N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning] Back     alignment and domain information
>cd01997 GMP_synthase_C The C-terminal domain of GMP synthetase Back     alignment and domain information
>PRK01565 thiamine biosynthesis protein ThiI; Provisional Back     alignment and domain information
>PLN02347 GMP synthetase Back     alignment and domain information
>cd01995 ExsB ExsB is a transcription regulator related protein Back     alignment and domain information
>PRK02628 nadE NAD synthetase; Reviewed Back     alignment and domain information
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG2117 Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein Back     alignment and domain information
>PF00764 Arginosuc_synth: Arginosuccinate synthase; InterPro: IPR001518 Argininosuccinate synthase (6 Back     alignment and domain information
>TIGR00342 thiazole biosynthesis/tRNA modification protein ThiI Back     alignment and domain information
>PTZ00394 glucosamine-fructose-6-phosphate aminotransferase; Provisional Back     alignment and domain information
>PRK08384 thiamine biosynthesis protein ThiI; Provisional Back     alignment and domain information
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>PRK05370 argininosuccinate synthase; Validated Back     alignment and domain information
>PF01171 ATP_bind_3: PP-loop family; InterPro: IPR011063 This entry represents the PP-loop motif superfamily [,] Back     alignment and domain information
>cd01713 PAPS_reductase This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase Back     alignment and domain information
>PLN02981 glucosamine:fructose-6-phosphate aminotransferase Back     alignment and domain information
>COG0171 NadE NAD synthase [Coenzyme metabolism] Back     alignment and domain information
>PRK05253 sulfate adenylyltransferase subunit 2; Provisional Back     alignment and domain information
>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional Back     alignment and domain information
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>COG1365 Predicted ATPase (PP-loop superfamily) [General function prediction only] Back     alignment and domain information
>COG0137 ArgG Argininosuccinate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PF02568 ThiI: Thiamine biosynthesis protein (ThiI); InterPro: IPR020536 Thiamine pyrophosphate (TPP) is synthesized de novo in many bacteria and is a required cofactor for many enzymes in the cell Back     alignment and domain information
>PRK08576 hypothetical protein; Provisional Back     alignment and domain information
>PRK10660 tilS tRNA(Ile)-lysidine synthetase; Provisional Back     alignment and domain information
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0572 consensus Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>PLN02339 NAD+ synthase (glutamine-hydrolysing) Back     alignment and domain information
>PRK11750 gltB glutamate synthase subunit alpha; Provisional Back     alignment and domain information
>TIGR02039 CysD sulfate adenylyltransferase, small subunit Back     alignment and domain information
>COG0519 GuaA GMP synthase, PP-ATPase domain/subunit [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK02090 phosphoadenosine phosphosulfate reductase; Provisional Back     alignment and domain information
>cd01908 YafJ Glutamine amidotransferases class-II (Gn-AT)_YafJ-type Back     alignment and domain information
>TIGR03442 conserved hypothetical protein TIGR03442 Back     alignment and domain information
>PF01507 PAPS_reduct: Phosphoadenosine phosphosulfate reductase family; InterPro: IPR002500 This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase Back     alignment and domain information
>PRK08557 hypothetical protein; Provisional Back     alignment and domain information
>COG0301 ThiI Thiamine biosynthesis ATP pyrophosphatase [Coenzyme metabolism] Back     alignment and domain information
>TIGR00289 conserved hypothetical protein TIGR00289 Back     alignment and domain information
>KOG1706 consensus Argininosuccinate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK12563 sulfate adenylyltransferase subunit 2; Provisional Back     alignment and domain information
>PRK13794 hypothetical protein; Provisional Back     alignment and domain information
>PRK13795 hypothetical protein; Provisional Back     alignment and domain information
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF) Back     alignment and domain information
>TIGR00434 cysH phosophoadenylyl-sulfate reductase (thioredoxin) Back     alignment and domain information
>KOG1622 consensus GMP synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR03183 DNA_S_dndC putative sulfurtransferase DndC Back     alignment and domain information
>COG0449 GlmS Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR02057 PAPS_reductase phosphoadenosine phosphosulfate reductase, thioredoxin dependent Back     alignment and domain information
>PRK06850 hypothetical protein; Provisional Back     alignment and domain information
>PF09147 DUF1933: Domain of unknown function (DUF1933); InterPro: IPR015230 This domain is predominantly found in carbapenam synthetase, and is composed of two antiparallel six-stranded beta-sheets that form a sandwich, flanked on each side by two alpha-helices Back     alignment and domain information
>COG0175 CysH 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase [General function prediction only] Back     alignment and domain information
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only] Back     alignment and domain information
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal Back     alignment and domain information
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain Back     alignment and domain information
>KOG2303 consensus Predicted NAD synthase, contains CN hydrolase domain [Coenzyme transport and metabolism; General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query474
1ct9_A553 Crystal Structure Of Asparagine Synthetase B From E 1e-137
1q15_A503 Carbapenam Synthetase Length = 503 2e-13
1jgt_A513 Crystal Structure Of Beta-Lactam Synthetase Length 7e-05
>pdb|1CT9|A Chain A, Crystal Structure Of Asparagine Synthetase B From Escherichia Coli Length = 553 Back     alignment and structure 
Iteration: 1

 Score =  485 bits (1249), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 242/444 (54%), Positives = 312/444 (70%), Gaps = 12/444 (2%)
Query: 2   LDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPP 61
           L GMF+F L D+  +++++ RD +GI  LY+G+   G ++++SE+K L   C   + FP 
Sbjct: 117 LQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVCRTIKEFPA 176
Query: 62  GHLYSSKSGGLKRWYNPTWYS-EAIPSTPYDPLVLRQAFENAVIKRLMTDVPFXXXXXXX 120
           G    S+ G ++ +Y+  W+  +A+     D   LRQA E++V   LM+DVP+       
Sbjct: 177 GSYLWSQDGEIRSYYHRDWFDYDAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGG 236
Query: 121 XXXXXXXXIT----ARHLAGTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHE 176
                   IT    AR +   + +  W  QLHSF VGL GSPDLK A+EVA++LGTVHHE
Sbjct: 237 LDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTVHHE 296
Query: 177 FHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGG 236
            HFTVQ+G+DAI +VIYH+ETYDVTTIRASTPM+LMSRKIK++G+KMV+SGEGSDE+FGG
Sbjct: 297 IHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGG 356
Query: 237 YLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAID 296
           YLYFHKAPN +E H ET  K+ ALH YDC RANK+ SAWG+EARVPFLDK F++VAM I+
Sbjct: 357 YLYFHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRIN 416
Query: 297 PEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQ 356
           P+ KM     G++EK ILR+ F+     YLP  V +RQKEQFSDGVGYSWID LK  A Q
Sbjct: 417 PQDKMCG--NGKMEKHILRECFE----AYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQ 470
Query: 357 HVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEW 416
            V+D+ ++ A++ FP+NTP +KEAY YR IFE  FP  SA   VPGG SVACS+AKA+EW
Sbjct: 471 QVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPLPSAAECVPGGPSVACSSAKAIEW 530
Query: 417 DAEWANNLDPSGRAALGVHLSAYE 440
           D  +    DPSGR A+GVH SAY+
Sbjct: 531 DEAFKKMDDPSGR-AVGVHQSAYK 553
>pdb|1Q15|A Chain A, Carbapenam Synthetase Length = 503 Back     alignment and structure
>pdb|1JGT|A Chain A, Crystal Structure Of Beta-Lactam Synthetase Length = 513 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query474
1ct9_A553 Asparagine synthetase B; amidotransferase, substra 0.0
1jgt_A513 Beta-lactam synthetase; asparagine synthetase, cla 1e-168
1q15_A503 CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, 1e-161
3k32_A203 Uncharacterized protein MJ0690; predicted subunit 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1 Length = 553 Back     alignment and structure
 Score =  569 bits (1467), Expect = 0.0
 Identities = 252/445 (56%), Positives = 327/445 (73%), Gaps = 12/445 (2%)

Query: 1   MLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFP 60
            L GMF+F L D+  +++++ RD +GI  LY+G+   G ++++SE+K L   C   + FP
Sbjct: 116 DLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVCRTIKEFP 175

Query: 61  PGHLYSSKSGGLKRWYNPTWYS-EAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSG 119
            G    S+ G ++ +Y+  W+  +A+     D   LRQA E++V   LM+DVP+GVLLSG
Sbjct: 176 AGSYLWSQDGEIRSYYHRDWFDYDAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSG 235

Query: 120 GLDSSLVASITARHLA----GTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHH 175
           GLDSS++++IT ++ A      + +  W  QLHSF VGL GSPDLK A+EVA++LGTVHH
Sbjct: 236 GLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTVHH 295

Query: 176 EFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFG 235
           E HFTVQ+G+DAI +VIYH+ETYDVTTIRASTPM+LMSRKIK++G+KMV+SGEGSDE+FG
Sbjct: 296 EIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFG 355

Query: 236 GYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAI 295
           GYLYFHKAPN +E H ET  K+ ALH YDC RANK+ SAWG+EARVPFLDK F++VAM I
Sbjct: 356 GYLYFHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRI 415

Query: 296 DPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAE 355
           +P+ KM     G++EK ILR+ F+     YLP  V +RQKEQFSDGVGYSWID LK  A 
Sbjct: 416 NPQDKMCG--NGKMEKHILRECFEA----YLPASVAWRQKEQFSDGVGYSWIDTLKEVAA 469

Query: 356 QHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVE 415
           Q V+D+ ++ A++ FP+NTP +KEAY YR IFE  FP  SA   VPGG SVACS+AKA+E
Sbjct: 470 QQVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPLPSAAECVPGGPSVACSSAKAIE 529

Query: 416 WDAEWANNLDPSGRAALGVHLSAYE 440
           WD  +    DPSGR A+GVH SAY+
Sbjct: 530 WDEAFKKMDDPSGR-AVGVHQSAYK 553
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A* Length = 513 Back     alignment and structure
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A* Length = 503 Back     alignment and structure
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii} Length = 203 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query474
1ct9_A553 Asparagine synthetase B; amidotransferase, substra 100.0
1jgt_A513 Beta-lactam synthetase; asparagine synthetase, cla 100.0
1q15_A503 CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, 100.0
1ao0_A459 Glutamine phosphoribosylpyrophosphate amidotransfe 99.47
1xff_A240 D-fructose-6-, glucosamine--fructose-6-phosphate a 99.19
2e18_A257 NH(3)-dependent NAD(+) synthetase; ligase, structu 99.15
1kqp_A271 NAD+ synthase, NH(3)-dependent NAD(+) synthetase, 99.14
3bl5_A219 Queuosine biosynthesis protein QUEC; PREQ1 biosynt 99.12
1xng_A268 NH(3)-dependent NAD(+) synthetase; amidotransferas 99.11
3sdb_A680 Glutamine-dependent NAD(+) synthetase; glutamine-a 99.07
3n05_A590 NH(3)-dependent NAD(+) synthetase; ligase, structu 98.99
1ecf_A504 Glutamine phosphoribosylpyrophosphate amidotransf; 98.96
3k32_A203 Uncharacterized protein MJ0690; predicted subunit 98.95
2bpl_A608 Glucosamine--fructose-6-phosphate aminotransferase 98.83
3fiu_A249 NH(3)-dependent NAD(+) synthetase; rossman fold, a 98.82
3p52_A249 NH(3)-dependent NAD(+) synthetase; structural geno 98.8
1wxi_A275 NH(3)-dependent NAD(+) synthetase; NADE, E.coli, l 98.78
2pg3_A232 Queuosine biosynthesis protein QUEC; YP_049261.1, 98.77
2nz2_A413 Argininosuccinate synthase; amino-acid biosynthesi 98.61
2dpl_A308 GMP synthetase, GMP synthase [glutamine-hydrolyzin 98.58
1kor_A400 Argininosuccinate synthetase; ligase, riken struct 98.56
1vl2_A421 Argininosuccinate synthase; TM1780, structural gen 98.54
3mdn_A274 Glutamine aminotransferase class-II domain protei; 98.53
1wy5_A317 TILS, hypothetical UPF0072 protein AQ_1887; N-type 98.5
2hma_A376 Probable tRNA (5-methylaminomethyl-2-thiouridylat 98.5
3q4g_A279 NH(3)-dependent NAD(+) synthetase; structural geno 98.34
2der_A380 TRNA-specific 2-thiouridylase MNMA; protein-RNA co 98.32
1k92_A455 Argininosuccinate synthase, argininosuccinate SY; 98.28
3tqi_A527 GMP synthase [glutamine-hydrolyzing]; ligase; 2.84 98.17
3dpi_A285 NAD+ synthetase; ssgcid, decode, structural genomi 98.17
1gpm_A525 GMP synthetase, XMP aminase; class I glutamine ami 98.13
3a2k_A464 TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, 98.07
2ywb_A503 GMP synthase [glutamine-hydrolyzing]; GMP syntheta 98.06
3ilv_A634 Glutamine-dependent NAD(+) synthetase; protein str 98.0
1sur_A215 PAPS reductase; assimilatory sulfate reduction, 3- 97.92
4f4h_A565 Glutamine dependent NAD+ synthetase; structural ge 97.89
2vxo_A697 GMP synthase [glutamine-hydrolyzing]; proto-oncoge 97.85
2c5s_A413 THII, probable thiamine biosynthesis protein THII; 97.82
3uow_A556 GMP synthetase; structural genomics consortium, SG 97.81
1ni5_A433 Putative cell cycle protein MESJ; structural genom 97.72
2o8v_A252 Phosphoadenosine phosphosulfate reductase; disulfi 97.45
3rjz_A237 N-type ATP pyrophosphatase superfamily; structural 97.45
1zun_A325 Sulfate adenylyltransferase subunit 2; beta barrel 97.45
1ea0_A 1479 Glutamate synthase [NADPH] large chain; oxidoreduc 97.25
2oq2_A261 Phosphoadenosine phosphosulfate reductase; sulfate 97.22
1vbk_A307 Hypothetical protein PH1313; structural genomics, 97.21
1ofd_A 1520 Ferredoxin-dependent glutamate synthase 2; oxidore 97.2
1te5_A257 Conserved hypothetical protein; glutamine amidotra 96.85
2wsi_A306 FAD synthetase; transferase, nucleotidyltransferas 95.69
2goy_A275 Adenosine phosphosulfate reductase; iron sulfur cl 95.35
3fwk_A308 FMN adenylyltransferase; FAD biosynthesis, alpha/b 89.93
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1 Back     alignment and structure
Probab=100.00  E-value=1.3e-95  Score=785.25  Aligned_cols=432  Identities=58%  Similarity=1.003  Sum_probs=358.5

Q ss_pred             CcceEEEEEEEECCCCEEEEEeccCCCceEEEEEecCceEEEecCccchhcccCcceEeCCCcEEEecCCeeEEeeCCCC
Q 011948            1 MLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTW   80 (474)
Q Consensus         1 ~L~G~FAf~i~D~~~~~l~laRD~~G~kPLyy~~~~~g~~~faSeik~L~~~~~~I~~lpPG~~l~~~~~~~~~y~~p~~   80 (474)
                      +|+|||||++||.++++++++||++|+|||||+...++.++||||+++|...+++|+.|||||++.+.+|+.++||++.|
T Consensus       116 ~l~G~fa~~i~d~~~~~l~~aRD~~G~~PLy~~~~~~~~~~faSe~~al~~~~~~i~~l~pG~~~~~~~g~~~~yw~~~~  195 (553)
T 1ct9_A          116 DLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVCRTIKEFPAGSYLWSQDGEIRSYYHRDW  195 (553)
T ss_dssp             GCCEEEEEEEEETTTTEEEEEECTTCCSCCEEEECTTCCEEEESSGGGTTTTCSEEEECCTTEEEETTTCSEEECCCCGG
T ss_pred             hCCccEEEEEEECCCCEEEEEECCCCCCCeEEEEecCCEEEEeechHHHHhhcCCEEEECCCeEEEEcCCcEEEeecCCc
Confidence            58999999999998999999999999999999984467899999999999999999999999999887778889999876


Q ss_pred             ccC-CCCCCCCcHHHHHHHHHHHHHHhhccCCCEEEecCCcccHHHHHHHHHHhhccccc----ccccCcceeEEeecCC
Q 011948           81 YSE-AIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLAGTKA----ARQWGTQLHSFCVGLE  155 (474)
Q Consensus        81 ~~~-~~~~~~~~~~~lr~~L~~AV~~rl~sd~pvgv~LSGGLDSS~Iaala~~~~~~~~~----~~~~~~~l~tftig~~  155 (474)
                      ... ..++.++.+++|+++|++||++|+++|+|+|++||||+|||+|++++++...+...    ..++.++++|||++++
T Consensus       196 ~~~~~~~~~~~~~~~lr~~L~~aV~~rl~sdvpvgv~LSGGlDSS~iaala~~~~~~~~~~~~~~~a~~~~l~tfsig~~  275 (553)
T 1ct9_A          196 FDYDAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLP  275 (553)
T ss_dssp             GSHHHHTTCCCCHHHHHHHHHHHHHHHTCCSSCEEEECCSSHHHHHHHHHHHHHC----------------CEEEEEEST
T ss_pred             cccccCCCHHHHHHHHHHHHHHHHHHHhcCCCceEEeCCCCccHHHHHHHHHHhhccccccccccccccCceeEEEecCC
Confidence            542 23455778999999999999999999999999999999999999999987642100    0001124899999999


Q ss_pred             CCCcHHHHHHHHHHhCCceEEEEeChhhhHHhHHHHHHhhccCCcccccchHHHHHHHHHHHhCCCcEEEEcCchhhhcc
Q 011948          156 GSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFG  235 (474)
Q Consensus       156 ~~~D~~~A~~vA~~lg~~h~~i~~~~~~~~~~l~~~i~~le~~~~~~i~~~~~~y~l~~~a~~~G~~vvLsG~GgDElfg  235 (474)
                      +++|..+|+++|+++|++||++.++.+++++.++++++++|+++++++++++++|++++.+++.|++|+|||+||||+||
T Consensus       276 ~~~E~~~A~~vA~~lg~~h~~i~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~~g~~vvLsG~GaDElfg  355 (553)
T 1ct9_A          276 GSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFG  355 (553)
T ss_dssp             TCHHHHHHHHHHHHHTCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTCCEEECCTTHHHHHT
T ss_pred             CCcHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHcCCeEEEECCCchhccc
Confidence            88999999999999999999999999999999999999999988777777889999999999999999999999999999


Q ss_pred             CCchhhcCCChhHHHHHHHHHHHhhcchhhhhcccccccCCceeecccCCHHHHHHHHcCCccccccCCCCCccchHHHH
Q 011948          236 GYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILR  315 (474)
Q Consensus       236 GY~~~~~~p~~~~~~~e~~~~l~~l~~~d~lr~dr~~~a~glE~R~PfLD~~vve~a~slP~~~k~~~~~~~~~~K~lLR  315 (474)
                      ||.+|+..|....|++|+.+++.+++.+|++|.||++|++|+|+|+||||++|||||++||+++|+.++  ++.+|+|||
T Consensus       356 GY~~~~~~~~~~~~~~e~~~~l~~l~~~~l~r~Dr~~ma~glE~R~PfLD~~lve~a~~lP~~~k~~~~--g~~~K~iLR  433 (553)
T 1ct9_A          356 GYLYFHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQDKMCGN--GKMEKHILR  433 (553)
T ss_dssp             CSGGGGGCCSHHHHHHHHHHHHHHGGGTHHHHHHHHHHTTTCEEECGGGCHHHHHHHHHSCGGGTCC-----CCTTHHHH
T ss_pred             CcHhHhhCcchhhHHHHHHHHHHHHhhhcchhhhhHHhhcCceeECCcCCHHHHHHHhcCCHHHhccCC--CCcchHHHH
Confidence            999999999888899999999999999999999999999999999999999999999999999999852  247899999


Q ss_pred             HhhccCCCCCCChhhhhcccCCCCCcchhhhHHHHHHHHHHhhccHHHHhccccCCCCCcchhHHhHHHHHHHHhCCccc
Q 011948          316 KAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNS  395 (474)
Q Consensus       316 ~a~~~~~~~~LP~~i~~R~K~~f~~~~~~~w~~~l~~~~~~~l~d~~l~~~~~~~~~~~~~~ke~~~~~~~f~~~~~~~~  395 (474)
                      +||++    +||++|+||+|+||+.|++++|++.++++++++++|+.+++++..+|.++|.|||+||||+||++|||+++
T Consensus       434 ~a~~~----~LP~~i~~R~K~~f~~p~~~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~e~~~~~~~f~~~~~~~~  509 (553)
T 1ct9_A          434 ECFEA----YLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPLPS  509 (553)
T ss_dssp             HHHGG----GSCHHHHTCCCCTTCCTTCHHHHHHHHHHHHHHSCHHHHHTHHHHCCSSCCCSHHHHHHHHHHHHHCCCHH
T ss_pred             HHHHh----hCCHHHHcCCCcCCCCCccHhHHHHHHHHHHHHhChHHHHhhhhhcCCCCCCchhHHHHHHHHHHHCCcHH
Confidence            99999    99999999999999999998899889999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccchhhhchHhhhcCCCCCchhHHHhhHHHh
Q 011948          396 ARLTVPGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAY  439 (474)
Q Consensus       396 ~~~~~~~~~~~~c~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~  439 (474)
                      +..+||.++||+|||+++++|+|+|++.+|||||++ ++|.++|
T Consensus       510 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~d~s~r~~-~~~~~~~  552 (553)
T 1ct9_A          510 AAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGRAV-GVHQSAY  552 (553)
T ss_dssp             HHHHSCC-------------------------------------
T ss_pred             HHhhCCCCCCcccccHHHhhhhhhhCcCCCCcchhh-hhhhccC
Confidence            999999999999999999999999999999999975 9998887
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A* Back     alignment and structure
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A* Back     alignment and structure
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1* Back     alignment and structure
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A* Back     alignment and structure
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii} Back     alignment and structure
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A Back     alignment and structure
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis} Back     alignment and structure
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A Back     alignment and structure
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A* Back     alignment and structure
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis} Back     alignment and structure
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A* Back     alignment and structure
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii} Back     alignment and structure
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A* Back     alignment and structure
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp} Back     alignment and structure
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0 Back     alignment and structure
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A* Back     alignment and structure
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1 Back     alignment and structure
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens} Back     alignment and structure
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A Back     alignment and structure
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A* Back     alignment and structure
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1 Back     alignment and structure
>3mdn_A Glutamine aminotransferase class-II domain protei; structural genomics, PSI-2, protein structure initiative; 2.09A {Ruegeria pomeroyi} Back     alignment and structure
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A* Back     alignment and structure
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae} Back     alignment and structure
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0 Back     alignment and structure
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A* Back     alignment and structure
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A* Back     alignment and structure
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii} Back     alignment and structure
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0 Back     alignment and structure
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1 Back     alignment and structure
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus} Back     alignment and structure
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A* Back     alignment and structure
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2 Back     alignment and structure
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis} Back     alignment and structure
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens} Back     alignment and structure
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1 Back     alignment and structure
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum} Back     alignment and structure
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1 Back     alignment and structure
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli} Back     alignment and structure
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A Back     alignment and structure
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2 Back     alignment and structure
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A* Back     alignment and structure
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae} Back     alignment and structure
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1 Back     alignment and structure
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A* Back     alignment and structure
>1te5_A Conserved hypothetical protein; glutamine amidotransferase, amidotransferase, structural genomics, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa PAO1} SCOP: d.153.1.1 Back     alignment and structure
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae} Back     alignment and structure
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa} Back     alignment and structure
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 474
d1ct9a1324 c.26.2.1 (A:193-516) Asparagine synthetase B, C-te 2e-86
d1jgta1299 c.26.2.1 (A:210-508) beta-Lactam synthetase {Strep 4e-52
d1q15a1296 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pecto 3e-51
d1ct9a2192 d.153.1.1 (A:1-192) Asparagine synthetase B, N-ter 7e-15
d1q15a2204 d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectob 3e-04
>d1ct9a1 c.26.2.1 (A:193-516) Asparagine synthetase B, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 324 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: Asparagine synthetase B, C-terminal domain
species: Escherichia coli [TaxId: 562]

 Score =  266 bits (679), Expect = 2e-86
 Identities = 201/334 (60%), Positives = 251/334 (75%), Gaps = 14/334 (4%)

Query: 73  KRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITAR 132
           + W++     +A+     D   LRQA E++V   LM+DVP+GVLLSGGLDSS++++IT +
Sbjct: 1   RDWFDY----DAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGGLDSSIISAITKK 56

Query: 133 HLA----GTKAARQWGTQLHSFCVGLEGSPDLKYAKEVADYLGTVHHEFHFTVQDGIDAI 188
           + A      + +  W  QLHSF VGL GSPDLK A+EVA++LGTVHHE HFTVQ+G+DAI
Sbjct: 57  YAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAI 116

Query: 189 EEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEE 248
            +VIYH+ETYDVTTIRASTPM+LMSRKIK++G+KMV+SGEGSDE+FGGYLYFHKAPN +E
Sbjct: 117 RDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKE 176

Query: 249 FHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGR 308
            H ET  K+ ALH YDC RANK+ SAWG+EARVPFLDK F++VAM I+P+ KM      +
Sbjct: 177 LHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQDKMCGNG--K 234

Query: 309 IEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQY 368
           +EK ILR+ F      YLP  V +RQKEQFSDGVGYSWID LK  A Q V+D+ ++ A++
Sbjct: 235 MEKHILRECF----EAYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETARF 290

Query: 369 IFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPG 402
            FP+NTP +KEAY YR IFE  FP  SA   VPG
Sbjct: 291 RFPYNTPTSKEAYLYREIFEELFPLPSAAECVPG 324
>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Length = 299 Back     information, alignment and structure
>d1q15a1 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Length = 296 Back     information, alignment and structure
>d1ct9a2 d.153.1.1 (A:1-192) Asparagine synthetase B, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 192 Back     information, alignment and structure
>d1q15a2 d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Length = 204 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query474
d1ct9a1324 Asparagine synthetase B, C-terminal domain {Escher 100.0
d1jgta1299 beta-Lactam synthetase {Streptomyces clavuligerus 100.0
d1q15a1296 beta-Lactam synthetase {Pectobacterium carotovorum 100.0
d1ct9a2192 Asparagine synthetase B, N-terminal domain {Escher 99.81
d1jgta2206 beta-Lactam synthetase {Streptomyces clavuligerus 99.68
d1q15a2204 beta-Lactam synthetase {Pectobacterium carotovorum 99.41
d1gph12234 Glutamine PRPP amidotransferase, N-terminal domain 99.16
d1ecfa2249 Glutamine PRPP amidotransferase, N-terminal domain 98.49
d1xnga1255 NH3-dependent NAD+-synthetase {Helicobacter pylori 98.48
d1xffa_238 Glucosamine 6-phosphate synthase, N-terminal domai 98.42
d2c5sa1218 Thiamine biosynthesis protein ThiI, C-terminal dom 98.3
d1kqpa_271 NH3-dependent NAD+-synthetase {Bacillus subtilis [ 98.15
d1gpma1197 GMP synthetase, central domain {Escherichia coli [ 97.99
d1wy5a1216 TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId 97.97
d1wxia1274 NH3-dependent NAD+-synthetase {Escherichia coli [T 97.93
d1ni5a1227 tRNA-Ile-lysidine synthetase, TilS, N-terminal dom 97.84
d1j20a1165 Argininosuccinate synthetase, N-terminal domain {T 97.71
d1k92a1188 Argininosuccinate synthetase, N-terminal domain {E 97.55
d1vl2a1168 Argininosuccinate synthetase, N-terminal domain {T 97.49
d2pg3a1230 Queuosine biosynthesis protein QueC {Erwinia carot 97.43
d1zuna1211 Sulfate adenylyltransferase subunit 2, CysD {Pseud 96.94
d1ofda3430 Alpha subunit of glutamate synthase, N-terminal do 96.49
d1sura_215 Phosphoadenylyl sulphate (PAPS) reductase {Escheri 95.81
d1ea0a3422 Alpha subunit of glutamate synthase, N-terminal do 95.45
d2d13a1226 Hypothetical protein PH1257 {Archaeon Pyrococcus h 94.52
d1vbka1132 Hypothetical protein PH1313, C-terminal domain {Ar 93.37
d1te5a_253 Hypothetical protein YafJ (PA1307) {Pseudomonas ae 82.1
>d1ct9a1 c.26.2.1 (A:193-516) Asparagine synthetase B, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: Asparagine synthetase B, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.7e-62  Score=492.07  Aligned_cols=309  Identities=64%  Similarity=1.045  Sum_probs=275.6

Q ss_pred             CCCCcHHHHHHHHHHHHHHhhccCCCEEEecCCcccHHHHHHHHHHhhccccc----ccccCcceeEEeecCCCCCcHHH
Q 011948           87 STPYDPLVLRQAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLAGTKA----ARQWGTQLHSFCVGLEGSPDLKY  162 (474)
Q Consensus        87 ~~~~~~~~lr~~L~~AV~~rl~sd~pvgv~LSGGLDSS~Iaala~~~~~~~~~----~~~~~~~l~tftig~~~~~D~~~  162 (474)
                      +.....++|+++|++||++||++|+|||++||||||||+|++++++.......    .......+.+|++++++++|..+
T Consensus        11 ~~~~~~eel~~~l~~sV~~rl~sDvpig~~LSGGlDSs~Iaal~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~~~   90 (324)
T d1ct9a1          11 DNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKA   90 (324)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHTCCSSCEEEECCSSHHHHHHHHHHHHHC----------------CEEEEEESTTCHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHhccCCcEEEEecchHHHHHHHHHHHHHHhhcccccccccccCCCcccceeccCCCchHHH
Confidence            44556899999999999999999999999999999999999999887543210    00122457899999999999999


Q ss_pred             HHHHHHHhCCceEEEEeChhhhHHhHHHHHHhhccCCcccccchHHHHHHHHHHHhCCCcEEEEcCchhhhccCCchhhc
Q 011948          163 AKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHK  242 (474)
Q Consensus       163 A~~vA~~lg~~h~~i~~~~~~~~~~l~~~i~~le~~~~~~i~~~~~~y~l~~~a~~~G~~vvLsG~GgDElfgGY~~~~~  242 (474)
                      |+++|+++|+.|+++.++.++..+.++++++++|.++++.....+++|.+++.+++.|++|+|||+||||+||||.+|+.
T Consensus        91 a~~~a~~~~~~~~~v~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~l~~~a~~~~~kV~LsG~GaDElfgGY~~~~~  170 (324)
T d1ct9a1          91 AQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLYFHK  170 (324)
T ss_dssp             HHHHHHHHTCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTCCEEECCTTHHHHHTCSGGGGG
T ss_pred             HHHHHhhccccceEEEEecchHHHHHHHHHHHHhhcCCcccccccHHHHHHHHHhcCCCeEeeccccchhhhhcchhhhc
Confidence            99999999999999999999999999999999998876666667888999999999999999999999999999999988


Q ss_pred             CCChhHHHHHHHHHHHhhcchhhhhcccccccCCceeecccCCHHHHHHHHcCCccccccCCCCCccchHHHHHhhccCC
Q 011948          243 APNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEE  322 (474)
Q Consensus       243 ~p~~~~~~~e~~~~l~~l~~~d~lr~dr~~~a~glE~R~PfLD~~vve~a~slP~~~k~~~~~~~~~~K~lLR~a~~~~~  322 (474)
                      ......+++........++.+.+.|.||++|++|+|.|+||||++||+|+++||+++|+..+  +..+|+|||+||++  
T Consensus       171 ~~~~~~~~~~~~~~~~~l~~~~l~~~dr~~m~~g~E~R~PfLD~~lve~~~~lp~~~k~~~~--~~~~K~iLR~a~~~--  246 (324)
T d1ct9a1         171 APNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQDKMCGN--GKMEKHILRECFEA--  246 (324)
T ss_dssp             CCSHHHHHHHHHHHHHHGGGTHHHHHHHHHHTTTCEEECGGGCHHHHHHHHHSCGGGTCC-----CCTTHHHHHHHGG--
T ss_pred             ccchHHHhhhhhhHHHHhhhhhhHHHHHHHHhcCccccHHHhhHHHHHHHHhCCHHHhcchh--hhhhHHHHHHHHHh--
Confidence            87777788777777788888899999999999999999999999999999999999998653  35789999999999  


Q ss_pred             CCCCChhhhhcccCCCCCcchhhhHHHHHHHHHHhhccHHHHhccccCCCCCcchhHHhHHHHHHHHhCCccccccccc
Q 011948          323 RPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVP  401 (474)
Q Consensus       323 ~~~LP~~i~~R~K~~f~~~~~~~w~~~l~~~~~~~l~d~~l~~~~~~~~~~~~~~ke~~~~~~~f~~~~~~~~~~~~~~  401 (474)
                        +||++|+||+|+||..|++++|.+.+++++++.++|+.+......++.+++.+||+++||+||+++||+++++.|||
T Consensus       247 --~lP~~i~~r~K~~f~~~~~~~~~~~l~~~~~~~ls~~~l~~~~~~~~~~~~~~ke~~~~r~if~~~~p~~~~~~~~~  323 (324)
T d1ct9a1         247 --YLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPLPSAAECVP  323 (324)
T ss_dssp             --GSCHHHHTCCCCTTCCTTCHHHHHHHHHHHHHHSCHHHHHTHHHHCCSSCCCSHHHHHHHHHHHHHCCCHHHHHHSC
T ss_pred             --cchhhhhcccccCCCCCcchHHHHHHHHHHHHHcCHHHHHHhHhhCCCCCCCcHHHHHHHHHHHHHCCCCcHHhcCC
Confidence              99999999999999999999898999999999999999999999999999999999999999999999999999987
>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1q15a1 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d1ct9a2 d.153.1.1 (A:1-192) Asparagine synthetase B, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jgta2 d.153.1.1 (A:4-209) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1q15a2 d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d1gph12 d.153.1.1 (1:1-234) Glutamine PRPP amidotransferase, N-terminal domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ecfa2 d.153.1.1 (A:1-249) Glutamine PRPP amidotransferase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xnga1 c.26.2.1 (A:3-257) NH3-dependent NAD+-synthetase {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1xffa_ d.153.1.1 (A:) Glucosamine 6-phosphate synthase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2c5sa1 c.26.2.6 (A:174-391) Thiamine biosynthesis protein ThiI, C-terminal domain {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d1kqpa_ c.26.2.1 (A:) NH3-dependent NAD+-synthetase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1gpma1 c.26.2.1 (A:208-404) GMP synthetase, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wy5a1 c.26.2.5 (A:1-216) TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1wxia1 c.26.2.1 (A:2-275) NH3-dependent NAD+-synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ni5a1 c.26.2.5 (A:0-226) tRNA-Ile-lysidine synthetase, TilS, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j20a1 c.26.2.1 (A:1-165) Argininosuccinate synthetase, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1k92a1 c.26.2.1 (A:1-188) Argininosuccinate synthetase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vl2a1 c.26.2.1 (A:2-169) Argininosuccinate synthetase, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2pg3a1 c.26.2.1 (A:1-230) Queuosine biosynthesis protein QueC {Erwinia carotovora [TaxId: 554]} Back     information, alignment and structure
>d1zuna1 c.26.2.2 (A:1-211) Sulfate adenylyltransferase subunit 2, CysD {Pseudomonas syringae pv. tomato [TaxId: 323]} Back     information, alignment and structure
>d1ofda3 d.153.1.1 (A:1-430) Alpha subunit of glutamate synthase, N-terminal domain {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d1sura_ c.26.2.2 (A:) Phosphoadenylyl sulphate (PAPS) reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ea0a3 d.153.1.1 (A:1-422) Alpha subunit of glutamate synthase, N-terminal domain {Azospirillum brasilense [TaxId: 192]} Back     information, alignment and structure
>d2d13a1 c.26.2.1 (A:2-227) Hypothetical protein PH1257 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1vbka1 c.26.2.6 (A:176-307) Hypothetical protein PH1313, C-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1te5a_ d.153.1.1 (A:) Hypothetical protein YafJ (PA1307) {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure