Citrus Sinensis ID: 011973

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470----
Protein Sequence
MFNIYYFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFPVA
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccccccccEEEEHHHHHHHHcccccccHHHHHHHHHccccccccccccccEEEEccccccHHHcccccHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccccccEEEEEEcccEEEcccHHHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHccccccEEEEccccccEEEEEEccccHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHHcccEEEEEEcHHHHHHHHHcccHHHcccEEEEEcccccccEEEEEcccccHHHHHccccccEEEEcccccccccccccEEEEcccccccccccccccccccccccEEEHHHHHHHHHHHccccccccccccccHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEcccHHcHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcccccEEEccHHHHHHccccEEEEEcccccccccHHcccccHcHHHHHHHHcccccccHHHHHHHHHccccHHcccccccccEEEEEEcccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEHHHHccccEEEEEEcccccEEcccHHHHHHHHHHHHHHHHHHHcccEEEEEHHHccHHHHccccEEEEEEcccccEEEEEcccHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHcccEEEEEcHHHHHHHHHHccHHHHHHEEEEccccccccEEEEEEccccHHHHHHcccccEEEEcccccHHHHHcccccccccccccccccccccHHHHHccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
mfniyyfpavihPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFmnnmghcnfefipmwlftvfpplkflmytpsyhslhhtqfrtnyslfmpiydyiygtidrssdsVYEKSLkrsgeeeeesaddvdvvhlthlttpesiYHLRIGFaslaskphrytYTLSQWYLQLLWPFTASCSVLVSWIYGrtfvsesntldklklqtwVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLlnqgeelnrngeiylerqpnklkikvVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTsyaahktkiwlvgddltgkeqarapkgtifipytqipprklrkdcfyhstpamiippslsnmhsceNWLGRRVMSAWRIAGIIHALegwdlnecgqtmcDIHQVWHAslrhgfrplfpva
Flexible Loop (DISEMBL)
MFNIYYFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRsgeeeeesaddvdvVHLTHLttpesiyhLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVsesntldklklqtwvVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLstsyaahktkiWLVGDDLTGKeqarapkgtifipytqipprkLRKDCFYHStpamiippslsNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFPVA
Low Complexity Region (SEG)
MFNIYYFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGeeeeeSADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGtvtankvanavaSSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFPVA
Disordered region (IsUnstruct)
*FNIYYFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTID************************VDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLF***
Disordered Region (DISOPRED)
**NIYYFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDS********************DVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD************AQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLF***
Disordered Region (DISEMBL)
MFNIYYFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSS*********************VDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFPVA
Disordered Region (DISPRO)
MFNIYYFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFP**
Transmembrane Helix (TMHMM)
oooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFNIYYFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFPVA
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	474	2.2.26 [Sep-21-2011]
F4HVY0	625	Protein ECERIFERUM 1 OS=A	no	no	0.943	0.715	0.619	1e-169
F4HVX7	627	Protein CER1-like 1 OS=Ar	no	no	0.943	0.712	0.565	1e-147
F4IR05	613	Protein CER1-like 2 OS=Ar	no	no	0.919	0.711	0.547	1e-140
Q8H1Z0	632	Protein ECERIFERUM 3 OS=A	no	no	0.926	0.694	0.370	5e-79

>sp|F4HVY0|CER1_ARATH Protein ECERIFERUM 1 OS=Arabidopsis thaliana GN=CER1 PE=1 SV=1

 Score =  593 bits (1530), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 288/465 (61%), Positives = 369/465 (79%), Gaps = 18/465 (3%)

Query: 9   AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
           +VIHPFAEHI YF+LFAIPL+TT++ K ASI SF GYIIY+DFMNNMGHCNFE IP  LF
Sbjct: 173 SVIHPFAEHIAYFILFAIPLLTTLLTKTASIISFAGYIIYIDFMNNMGHCNFELIPKRLF 232

Query: 69  TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEE 128
            +FPPLKFL YTPSYHSLHHTQFRTNYSLFMP+YDYIYGT+D S+D++YEK+L+R     
Sbjct: 233 HLFPPLKFLCYTPSYHSLHHTQFRTNYSLFMPLYDYIYGTMDESTDTLYEKTLERGD--- 289

Query: 129 EESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVL 188
               D VDVVHLTHLTTPESIYHLRIG AS AS P  Y     +W+++LLWPFT S S++
Sbjct: 290 ----DIVDVVHLTHLTTPESIYHLRIGLASFASYPFAY-----RWFMRLLWPFT-SLSMI 339

Query: 189 VSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKV 248
            +  Y R FV+E N+ +KL LQ+WV+PRY +QY L WR+EAIN++IE+AILEAD KGVKV
Sbjct: 340 FTLFYARLFVAERNSFNKLNLQSWVIPRYNLQYLLKWRKEAINNMIEKAILEADKKGVKV 399

Query: 249 ISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 308
           +SLGL+NQGEELNRNGE+Y+   P+ +K+++VDGS LAAAVV+NS+PK T  V++ G +T
Sbjct: 400 LSLGLMNQGEELNRNGEVYIHNHPD-MKVRLVDGSRLAAAVVINSVPKATTSVVMTGNLT 458

Query: 309 ANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGD 368
             KVA  +AS+LCQ G++V+T+  D+YEK++  +P E + +LV  TS A    K+WLVG+
Sbjct: 459 --KVAYTIASALCQRGVQVSTLRLDEYEKIRSCVPQECRDHLVYLTSEALSSNKVWLVGE 516

Query: 369 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVM 428
             T +EQ +A KGT+FIP++Q P ++LR+DC YH+TPA+I+P SL N+HSCENWL R+ M
Sbjct: 517 GTTREEQEKATKGTLFIPFSQFPLKQLRRDCIYHTTPALIVPKSLVNVHSCENWLPRKAM 576

Query: 429 SAWRIAGIIHALEGWDLNECGQT--MCDIHQVWHASLRHGFRPLF 471
           SA R+AGI+HALEGW+++ECG +  + D+ QVW A L HGF+PL 
Sbjct: 577 SATRVAGILHALEGWEMHECGTSLLLSDLDQVWEACLSHGFQPLL 621

Aldehyde decarbonylase involved in the conversion of aldehydes to alkanes. Core component of a very-long-chain alkane synthesis complex. Involved in epicuticular wax biosynthesis and pollen fertility.
Arabidopsis thaliana (taxid: 3702)

>sp|F4HVX7|CERL1_ARATH Protein CER1-like 1 OS=Arabidopsis thaliana GN=At1g02190 PE=2 SV=1

 Score =  522 bits (1344), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/469 (56%), Positives = 340/469 (72%), Gaps = 22/469 (4%)

Query: 9   AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
           +V+HPFAEHI Y LLFAIP+VT  +    SI S +GYI Y+DFMNNMGHCNFE  P  LF
Sbjct: 173 SVVHPFAEHIAYTLLFAIPMVTASLCGILSIVSIMGYITYIDFMNNMGHCNFELFPKRLF 232

Query: 69  TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEE 128
            +FPPLKFL YTPS+HSLHHTQFRTNYSLFMPIYD+IYGT D  +DS+YE+SL    E E
Sbjct: 233 HLFPPLKFLCYTPSFHSLHHTQFRTNYSLFMPIYDFIYGTTDNLTDSLYERSL----EIE 288

Query: 129 EESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQ-LLWPFTASCS- 186
           EES    DV+HLTHLTT  SIY +R+GF SL+S P    ++   WYL   +WPFT  CS 
Sbjct: 289 EESP---DVIHLTHLTTHNSIYQMRLGFPSLSSCP---LWSRPPWYLTCFMWPFTLLCSF 342

Query: 187 VLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGV 246
            L S I  RTFV E N L  L + + ++P++   Y      E+IN++IEEAILEAD KGV
Sbjct: 343 ALTSAIPLRTFVFERNRLRDLTVHSHLLPKFSFHYKSQRHHESINTIIEEAILEADEKGV 402

Query: 247 KVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGT 306
           KV+SLGL+N  EELN +GE+Y+++ P KLKI++VDGSS+AA VV+N++PK    ++ RG 
Sbjct: 403 KVMSLGLMNNREELNGSGEMYVQKYP-KLKIRLVDGSSMAATVVINNIPKEATEIVFRGN 461

Query: 307 VTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLV 366
           +T  KVA+AV  +LCQ G+KV  + ++++ KL   I      NLVLSTS + +  K+WLV
Sbjct: 462 LT--KVASAVVFALCQKGVKVVVLREEEHSKL---IKSGVDKNLVLSTSNSYYSPKVWLV 516

Query: 367 GDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR 426
           GD +  +EQ +A +GT+F+P++  PP KLRKDCFY STPAM +P S  N+ SCENWLGRR
Sbjct: 517 GDGIENEEQMKAKEGTLFVPFSHFPPNKLRKDCFYQSTPAMRVPKSAQNIDSCENWLGRR 576

Query: 427 VMSAWRIAGIIHALEGWDLNECGQTMCDI---HQVWHASLRHGFRPLFP 472
           VMSAW+I GI+HALEGW+ ++CG T C++   H +W A+LRH F+PL P
Sbjct: 577 VMSAWKIGGIVHALEGWEEHDCGNT-CNVLRLHAIWEAALRHDFQPLPP 624

Arabidopsis thaliana (taxid: 3702)

>sp|F4IR05|CERL2_ARATH Protein CER1-like 2 OS=Arabidopsis thaliana GN=At2g37700 PE=2 SV=1

 Score =  500 bits (1287), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 255/466 (54%), Positives = 324/466 (69%), Gaps = 30/466 (6%)

Query: 9   AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
           +V+HPFAEHI Y L+  +PL+TT +    S+ S   Y+ Y+DFMNNMGHCNFE IP +LF
Sbjct: 169 SVVHPFAEHIGYTLILGLPLITTFMCGTVSVVSIALYLTYIDFMNNMGHCNFELIPKFLF 228

Query: 69  TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEE 128
           ++ PPLKFL YTPS+HSLHHTQFRTNYSLFMP+YDYIYGT D  SDS+YE SL    E+E
Sbjct: 229 SLLPPLKFLCYTPSFHSLHHTQFRTNYSLFMPMYDYIYGTTDECSDSLYETSL----EKE 284

Query: 129 EESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVL 188
           EE     D +HLTHLT+ +SIYHLR+GFASL+S P       S+ YL L+ PF    S +
Sbjct: 285 EEKP---DAIHLTHLTSLDSIYHLRLGFASLSSHPLS-----SRCYLFLMKPFALILSFI 336

Query: 189 VSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKV 248
           +     +TFV E N    L L + ++P++   Y    ++E IN +IE AILEAD KGVKV
Sbjct: 337 LRSFSFQTFVVERNRFRDLTLHSHLLPKFSSHYMSHQQKECINKMIEAAILEADKKGVKV 396

Query: 249 ISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 308
           +SLGLLNQGEELN  GE+Y+ R P KLKI++VDG SLAA VV++S+P  T  VL RG +T
Sbjct: 397 MSLGLLNQGEELNGYGEMYVRRHP-KLKIRIVDGGSLAAEVVLHSIPVGTKEVLFRGQIT 455

Query: 309 ANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGD 368
             KVA A+  SLCQ  IKV  + K+++  L   +  + + NL            IWLVGD
Sbjct: 456 --KVARAIVFSLCQNAIKVMVLRKEEHSMLAEFLDDKCKENL------------IWLVGD 501

Query: 369 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVM 428
            L+ KEQ  A  GT+F+P++Q PP+ LRKDCFYH+TPAMIIP S  N+ SCENWLGRRVM
Sbjct: 502 GLSTKEQKMAKDGTLFLPFSQFPPKTLRKDCFYHTTPAMIIPHSAQNIDSCENWLGRRVM 561

Query: 429 SAWRIAGIIHALEGWDLNECG---QTMCDIHQVWHASLRHGFRPLF 471
           SAWR+ GI+HALEGW  +ECG    ++ +  +VW A+LR+GF+PL 
Sbjct: 562 SAWRVGGIVHALEGWKEHECGLDDNSIINPPRVWEAALRNGFQPLL 607

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H1Z0|CER3_ARATH Protein ECERIFERUM 3 OS=Arabidopsis thaliana GN=CER3 PE=1 SV=1

 Score =  295 bits (755), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 169/456 (37%), Positives = 256/456 (56%), Gaps = 17/456 (3%)

Query: 16  EHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLK 75
           E+I+  ++  +PL+   +    S+++  GY +  DFM  +GHCN E     LF + P L+
Sbjct: 182 ENIILCVVAGVPLIGCCLFGVGSLSAIYGYAVMFDFMRCLGHCNVEIFSHKLFEILPVLR 241

Query: 76  FLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDV 135
           +L+YTP+YHSLHH +  TN+ LFMP++D +  T + +S  + +K    +GE +       
Sbjct: 242 YLIYTPTYHSLHHQEMGTNFCLFMPLFDVLGDTQNPNSWELQKKIRLSAGERKRVP---- 297

Query: 136 DVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGR 195
           + V L H     S  H    F S AS P+      ++ +L  +WPFT  C +L  W + +
Sbjct: 298 EFVFLAHGVDVMSAMHAPFVFRSFASMPYT-----TRIFLLPMWPFTF-CVMLGMWAWSK 351

Query: 196 TFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLN 255
           TF+    TL     QTW VPR+  QY LP+  + IN  IE AIL AD  GVKVISL  LN
Sbjct: 352 TFLFSFYTLRNNLCQTWGVPRFGFQYFLPFATKGINDQIEAAILRADKIGVKVISLAALN 411

Query: 256 QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANA 315
           + E LN  G +++ + P+ L+++VV G++L AAV++  +PK    V L G  +  K+  A
Sbjct: 412 KNEALNGGGTLFVNKHPD-LRVRVVHGNTLTAAVILYEIPKDVNEVFLTGATS--KLGRA 468

Query: 316 VASSLCQMGIKV--ATICKDDYEKLKLRIPVEAQHNLVLSTSY-AAHKTKIWLVGDDLTG 372
           +A  LC+ G++V   T+  + ++K++   PVE Q+NLV  T Y AA   K W+VG  LT 
Sbjct: 469 IALYLCRRGVRVLMLTLSMERFQKIQKEAPVEFQNNLVQVTKYNAAQHCKTWIVGKWLTP 528

Query: 373 KEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWR 432
           +EQ+ AP GT F  +   P  K R++C Y    AM +P  +  + +CE  + R V+ A  
Sbjct: 529 REQSWAPAGTHFHQFVVPPILKFRRNCTYGDLAAMKLPKDVEGLGTCEYTMERGVVHACH 588

Query: 433 IAGIIHALEGWDLNECGQTMCD-IHQVWHASLRHGF 467
             G++H LEGW  +E G    D I  VW A++++G 
Sbjct: 589 AGGVVHMLEGWKHHEVGAIDVDRIDLVWEAAMKYGL 624

Involved in cuticule membrane and wax production, and in the typhine and sopropollenin biosynthesis of pollen. May act as an aldehyde-generating acyl-CoA reductase.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	474
359489252	619	PREDICTED: protein WAX2-like [Vitis vini	0.934	0.715	0.638	1e-172
224129430	622	predicted protein [Populus trichocarpa]	0.943	0.718	0.625	1e-170
297734710	631	unnamed protein product [Vitis vinifera]	0.930	0.698	0.634	1e-170
356520717	624	PREDICTED: protein WAX2-like [Glycine ma	0.934	0.709	0.636	1e-169
359489254	619	PREDICTED: protein WAX2-like [Vitis vini	0.934	0.715	0.634	1e-169
359489250	619	PREDICTED: protein WAX2-like [Vitis vini	0.934	0.715	0.625	1e-169
449432335	624	PREDICTED: protein ECERIFERUM 1-like [Cu	0.934	0.709	0.632	1e-169
356504497	627	PREDICTED: protein WAX2-like [Glycine ma	0.934	0.706	0.634	1e-169
1209703	625	maize gl1 homolog [Arabidopsis thaliana]	0.943	0.715	0.617	1e-169
145361948	461	CER1 protein [Arabidopsis thaliana] gi|1	0.947	0.973	0.618	1e-169

>gi|359489252|ref|XP_002263787.2| PREDICTED: protein WAX2-like [Vitis vinifera]

 Score =  609 bits (1571), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 295/462 (63%), Positives = 366/462 (79%), Gaps = 19/462 (4%)

Query: 9   AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
           +VIHPFAEHI YFLLF+IPL+T +     SI SFVGYI Y+DFMNNMGHCNFE +P WLF
Sbjct: 173 SVIHPFAEHIGYFLLFSIPLLTVIFTGTRSIVSFVGYISYIDFMNNMGHCNFELVPKWLF 232

Query: 69  TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEE 128
           ++FP LK+LMYTPS+HSLHHTQFRTNYSLFMP YDY+YGT+D+SSD +YEKSL R     
Sbjct: 233 SIFPFLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYMYGTMDKSSDVLYEKSLTRP---- 288

Query: 129 EESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVL 188
           EES    DVVHLTHLTTP+SIYH+R+GFAS+ASKP+     +S+WYL+L+WP T+S  +L
Sbjct: 289 EESP---DVVHLTHLTTPDSIYHIRLGFASVASKPY-----ISKWYLRLMWPLTSSYMML 340

Query: 189 VSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKV 248
           + WI  RTFV E N  +KLKLQTWV+P+Y +QY L W+ E INSLIEEAIL+A+ +GV V
Sbjct: 341 I-WICSRTFVLERNHFNKLKLQTWVIPKYRIQYFLKWQNEPINSLIEEAILDAEQRGVNV 399

Query: 249 ISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 308
           +SLGLLNQGEELN  GE+Y+ R P KLKIKVVDGSSLA AVV+NS+PK T  VL RG ++
Sbjct: 400 LSLGLLNQGEELNIYGELYIHRNP-KLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGKLS 458

Query: 309 ANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGD 368
             KVA   A +LCQ GI+VAT  +++Y K+ +++  +    L LS +YA    KIWLVGD
Sbjct: 459 --KVAYFTALALCQKGIQVATFHEEEYAKINMKLNTKLGGKLALSKNYAH---KIWLVGD 513

Query: 369 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVM 428
            LT +EQ +APKGT+FIP++Q PP+++RKDCFYH+TPAM+ P S  NM SCENWL RR M
Sbjct: 514 GLTKEEQLKAPKGTLFIPFSQFPPKRMRKDCFYHTTPAMMSPTSFENMDSCENWLPRRAM 573

Query: 429 SAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 470
           SAWR+AGI+HALEGW+++ECG  + DI ++W ASL+HGFRPL
Sbjct: 574 SAWRVAGILHALEGWNVHECGHAIFDIEKIWEASLQHGFRPL 615

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129430|ref|XP_002320584.1| predicted protein [Populus trichocarpa] gi|222861357|gb|EEE98899.1| predicted protein [Populus trichocarpa]

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 292/467 (62%), Positives = 363/467 (77%), Gaps = 20/467 (4%)

Query: 9   AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
           +VIHPFAEHI YF+LFAIPL+TT++   AS+AS  GYI Y+D MNNMGHCNFE +P WLF
Sbjct: 171 SVIHPFAEHISYFILFAIPLITTILTGTASVASLAGYITYIDVMNNMGHCNFELVPKWLF 230

Query: 69  TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEE 128
           T+F PLK+LMYTPS+HSLHHTQFRTNYSLFMPIYDYIYGT+D+SSD++YE SLKR  E  
Sbjct: 231 TIFRPLKYLMYTPSFHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDTLYEDSLKRPEEAP 290

Query: 129 EESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVL 188
                  DVVHLTHLTTP+SIYH R+G A LAS P +     S+WYL L+WP T   +++
Sbjct: 291 -------DVVHLTHLTTPDSIYHSRLGLAYLASNPQK-----SKWYLSLMWPVTL-WTMM 337

Query: 189 VSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKV 248
           ++WIYGR FV E N   KL+LQTW +P+Y +QYNL W   +IN+LIEEA+LEA+ KGVKV
Sbjct: 338 LTWIYGRAFVVERNRFHKLRLQTWTIPKYNIQYNLRWHTASINTLIEEAVLEAEEKGVKV 397

Query: 249 ISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 308
           +SLGLLNQ +ELNR GE+Y++R P +LK KVVDGSSLA A V+NS+PK T  VL RG ++
Sbjct: 398 LSLGLLNQAKELNRYGELYVQRYP-RLKTKVVDGSSLAVAAVLNSIPKGTTQVLHRGNLS 456

Query: 309 ANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEA-QHNLVLSTSYAAHKTKIWLVG 367
             KVA AV  +LC+ GI+VA   +DDY++LK      + Q+NL+LS +Y+    K WLVG
Sbjct: 457 --KVAYAVVLNLCRRGIQVAVPYEDDYKRLKKSFGSRSDQNNLILSKNYS---IKTWLVG 511

Query: 368 DDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRV 427
           D L G++Q +A +GT+FIP++Q PP+KLRKDCFYHSTPAM  P SL N+ SCENWL RRV
Sbjct: 512 DGLKGEDQKKATEGTLFIPFSQFPPKKLRKDCFYHSTPAMAAPASLENVDSCENWLPRRV 571

Query: 428 MSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFPVA 474
           MSAWR+AGI+HALEGW+ +ECG TM DI +VW AS++HGF+PL   A
Sbjct: 572 MSAWRVAGIVHALEGWNEHECGYTMSDIDKVWQASIQHGFKPLVITA 618

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734710|emb|CBI16761.3| unnamed protein product [Vitis vinifera]

 Score =  603 bits (1556), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 292/460 (63%), Positives = 364/460 (79%), Gaps = 19/460 (4%)

Query: 9   AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
           +VIHPFAEHI YFLLF+IPL+T +     SI SFVGYI Y+DFMNNMGHCNFE +P WLF
Sbjct: 173 SVIHPFAEHIGYFLLFSIPLLTVIFTGTRSIVSFVGYISYIDFMNNMGHCNFELVPKWLF 232

Query: 69  TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEE 128
           ++FP LK+LMYTPS+HSLHHTQFRTNYSLFMP YDY+YGT+D+SSD +YEKSL R     
Sbjct: 233 SIFPFLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYMYGTMDKSSDVLYEKSLTRP---- 288

Query: 129 EESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVL 188
           EES    DVVHLTHLTTP+SIYH+R+GFAS+ASKP+     +S+WYL+L+WP T+S  +L
Sbjct: 289 EESP---DVVHLTHLTTPDSIYHIRLGFASVASKPY-----ISKWYLRLMWPLTSSYMML 340

Query: 189 VSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKV 248
           + WI  RTFV E N  +KLKLQTWV+P+Y +QY L W+ E INSLIEEAIL+A+ +GV V
Sbjct: 341 I-WICSRTFVLERNHFNKLKLQTWVIPKYRIQYFLKWQNEPINSLIEEAILDAEQRGVNV 399

Query: 249 ISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 308
           +SLGLLNQGEELN  GE+Y+ R P KLKIKVVDGSSLA AVV+NS+PK T  VL RG ++
Sbjct: 400 LSLGLLNQGEELNIYGELYIHRNP-KLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGKLS 458

Query: 309 ANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGD 368
             KVA   A +LCQ GI+VAT  +++Y K+ +++  +    L LS +YA    KIWLVGD
Sbjct: 459 --KVAYFTALALCQKGIQVATFHEEEYAKINMKLNTKLGGKLALSKNYAH---KIWLVGD 513

Query: 369 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVM 428
            LT +EQ +APKGT+FIP++Q PP+++RKDCFYH+TPAM+ P S  NM SCENWL RR M
Sbjct: 514 GLTKEEQLKAPKGTLFIPFSQFPPKRMRKDCFYHTTPAMMSPTSFENMDSCENWLPRRAM 573

Query: 429 SAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFR 468
           SAWR+AGI+HALEGW+++ECG  + DI ++W ASL+HGF+
Sbjct: 574 SAWRVAGILHALEGWNVHECGHAIFDIEKIWEASLQHGFQ 613

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520717|ref|XP_003529007.1| PREDICTED: protein WAX2-like [Glycine max]

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 294/462 (63%), Positives = 358/462 (77%), Gaps = 19/462 (4%)

Query: 9   AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
           +VIHPFAEHI YF+LFAIPL TT+V + ASIAS+ GY+ Y+DFMNN+GHCNFE IP  +F
Sbjct: 173 SVIHPFAEHIAYFVLFAIPLYTTVVARTASIASYAGYLAYIDFMNNLGHCNFECIPKAIF 232

Query: 69  TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEE 128
           T FP LK+LMYTPS+HSLHHTQFRTNYSLFMPIYDYIYGT+D+++D+ YE +LKR     
Sbjct: 233 TAFPFLKYLMYTPSFHSLHHTQFRTNYSLFMPIYDYIYGTMDKTTDTTYEIALKR----- 287

Query: 129 EESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVL 188
           EES+   DVVHLTHLTTPESIYHLR+GFASLAS+P       S WYL L+WP T   S+L
Sbjct: 288 EESSP--DVVHLTHLTTPESIYHLRLGFASLASRPQS-----STWYLSLMWPLTL-WSIL 339

Query: 189 VSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKV 248
           V+W YG+TFV E N    L LQ+WV+PR+ VQY   W+ E +N LIEEAIL+A+   VKV
Sbjct: 340 VTWFYGQTFVMERNAFKMLNLQSWVIPRFHVQYLFKWQSETLNKLIEEAILQAELSKVKV 399

Query: 249 ISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 308
           +SLGL NQG+  N+ GE+Y++R P +LKIK+VDGSSL  A+VVNS+PK    VLL G   
Sbjct: 400 LSLGLSNQGDSFNKYGELYIKRYP-ELKIKIVDGSSLVVAIVVNSIPKEARQVLLCG--K 456

Query: 309 ANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGD 368
            NKV+ A+AS+LC+ G KV T+ KD+Y+KL+LRI  E++ NLV   SY A   KIWLVGD
Sbjct: 457 PNKVSYAIASALCERGTKVTTMYKDEYDKLQLRISNESKKNLVFPGSYTA---KIWLVGD 513

Query: 369 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVM 428
                EQ +APKG++FIP +Q PP+KLRKDCFYHSTPAMI PPSL N+ SCENWL RRVM
Sbjct: 514 QCDEVEQKKAPKGSLFIPISQFPPKKLRKDCFYHSTPAMIAPPSLVNVDSCENWLPRRVM 573

Query: 429 SAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 470
           SAWR+AGI+HALE W +NECG  M  + ++W ASL+HGFRPL
Sbjct: 574 SAWRVAGILHALECWKVNECGNVMFSVEKIWQASLQHGFRPL 615

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489254|ref|XP_002265189.2| PREDICTED: protein WAX2-like [Vitis vinifera] gi|297734711|emb|CBI16762.3| unnamed protein product [Vitis vinifera]

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 293/462 (63%), Positives = 365/462 (79%), Gaps = 19/462 (4%)

Query: 9   AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
           +VIHPFAEHI YFLLF+IPL+T +     SI SFVGYI Y+DFMNNMGHCNFE +P WLF
Sbjct: 173 SVIHPFAEHIGYFLLFSIPLLTVIFTGTRSIVSFVGYISYIDFMNNMGHCNFELVPKWLF 232

Query: 69  TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEE 128
           ++FP LK+LMYTPS+HSLHHTQFRTNYSLFMP YDYIYGT+D+SSD +YEKSL R     
Sbjct: 233 SIFPFLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYIYGTVDKSSDVLYEKSLTRP---- 288

Query: 129 EESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVL 188
           EES    DVVHLTHLTTP+SIYH+R+GFAS+ASKP+     +S+WYL+L+WP T+   +L
Sbjct: 289 EESP---DVVHLTHLTTPDSIYHMRLGFASVASKPY-----ISKWYLRLMWPLTSWYMML 340

Query: 189 VSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKV 248
           + WI  RTFV E N  +KLKLQTWV+P+Y +QY L  + E INSLIEEAIL+AD +GVKV
Sbjct: 341 I-WICSRTFVLERNHFNKLKLQTWVIPKYRIQYFLKGQNEPINSLIEEAILDADQRGVKV 399

Query: 249 ISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 308
           +SLG+LNQGEELN  GE+Y+ R P KLKIKVVDGSSLA AVV+NS+PK T  VL RG ++
Sbjct: 400 LSLGILNQGEELNIYGELYIHRNP-KLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGKLS 458

Query: 309 ANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGD 368
             KVA   A +LCQ GI+VAT  +++Y  + +++  +    L LS +YA    KIWLVGD
Sbjct: 459 --KVAYFTALALCQKGIQVATFHEEEYANINMKLNTKLGGKLALSKNYAH---KIWLVGD 513

Query: 369 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVM 428
            LT +EQ +APKGT+FIP++Q PP+++RKDCFYH+TPAM+ P S  +M SCENWL RR M
Sbjct: 514 GLTEEEQLKAPKGTLFIPFSQFPPKRMRKDCFYHTTPAMMSPTSFEDMDSCENWLPRRAM 573

Query: 429 SAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 470
           SAWR+AGI+HALEGW+++ECG T+ +I ++W ASL+HGFRPL
Sbjct: 574 SAWRVAGILHALEGWNVHECGHTIFNIEKIWEASLQHGFRPL 615

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489250|ref|XP_003633900.1| PREDICTED: protein WAX2-like [Vitis vinifera]

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 289/462 (62%), Positives = 365/462 (79%), Gaps = 19/462 (4%)

Query: 9   AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
           +VIHPFAEHI YFLLF+IPL+T +  + +S+ +F GYI Y+DFMNNMGHCNFE +P WLF
Sbjct: 173 SVIHPFAEHIGYFLLFSIPLLTMIFTRTSSVVAFFGYISYIDFMNNMGHCNFELVPKWLF 232

Query: 69  TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEE 128
           ++FP LK+LMYTPS+HSLHHTQFRTNYSLFMP YD++YGT+D+SSD +YEKSL R     
Sbjct: 233 SIFPFLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDFMYGTMDKSSDVLYEKSLTRP---- 288

Query: 129 EESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVL 188
           EES    DVVHLTHLTTP SIYH+R+GFAS+ASKP+     +S+WYL+L+WP T+S  +L
Sbjct: 289 EESP---DVVHLTHLTTPNSIYHIRLGFASVASKPY-----ISKWYLRLMWPLTSSYMML 340

Query: 189 VSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKV 248
           + WI  RTFV E N  +KLK QTWV+P+Y VQY L W+ E INSLIEEAIL A+ +GVKV
Sbjct: 341 I-WICSRTFVLERNHFNKLKSQTWVIPKYRVQYFLKWQNEPINSLIEEAILHAEERGVKV 399

Query: 249 ISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 308
           +SLGLLNQGEELN  G++Y+   P KLKIKVVDGSSLA AVV+NS+PK T  VL RG ++
Sbjct: 400 LSLGLLNQGEELNLYGKLYIHLNP-KLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGKLS 458

Query: 309 ANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGD 368
             KVA   A +LCQ GI+V T C+++++K+K+++  +    L LS +YA    KIWLVGD
Sbjct: 459 --KVAYFTAIALCQKGIQVTTFCEEEHKKIKMKLNTKLGDKLALSKNYAH---KIWLVGD 513

Query: 369 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVM 428
            LT +EQ +APKGT+FIP++Q PP+++RKDCFYH+TPAM+ P S  NM SCENWL RR M
Sbjct: 514 GLTEEEQLKAPKGTLFIPFSQFPPKRMRKDCFYHTTPAMMSPTSFENMDSCENWLPRRAM 573

Query: 429 SAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 470
           SAWR+AGI+HALEGW+++ECG T+ DI ++W AS +HGFR L
Sbjct: 574 SAWRVAGILHALEGWNVHECGHTIFDIEKIWEASFQHGFRSL 615

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432335|ref|XP_004133955.1| PREDICTED: protein ECERIFERUM 1-like [Cucumis sativus]

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 292/462 (63%), Positives = 364/462 (78%), Gaps = 19/462 (4%)

Query: 9   AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
           +VIHPFAEH+ YFLLFAIP++T +    +S+A ++ Y+ Y+DFMNNMGHCNFE IP  LF
Sbjct: 173 SVIHPFAEHLTYFLLFAIPMLTVLFTGISSLAVYIFYLTYIDFMNNMGHCNFEIIPNRLF 232

Query: 69  TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEE 128
           T+FPPLK+ +YTPS+HSLHHTQFRTNYSLFMP+YDYIYGT+D SSDS+YEKSLKR    E
Sbjct: 233 TLFPPLKYFLYTPSFHSLHHTQFRTNYSLFMPLYDYIYGTLDNSSDSLYEKSLKR----E 288

Query: 129 EESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVL 188
           EE A   DVVHLTHLTTPESIYHLR+GFA LAS+PH      S WY  LL P T   S+L
Sbjct: 289 EEVA---DVVHLTHLTTPESIYHLRLGFADLASRPHT-----STWYTWLLSPITMG-SML 339

Query: 189 VSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKV 248
           ++WIYGRTFV E N  +KLK+QTW +P++ VQY L W+++AINS+IE+AI+EAD KG KV
Sbjct: 340 LTWIYGRTFVVERNQFEKLKMQTWAIPKFNVQYFLQWQKQAINSMIEDAIVEADQKGCKV 399

Query: 249 ISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 308
            SLGLLNQGEELN  G +Y++R P KL+++VVDGSSLA AVV+NS+PK+   VLLRG +T
Sbjct: 400 FSLGLLNQGEELNIYGGLYVQRNP-KLRVRVVDGSSLAVAVVLNSIPKSATQVLLRGKLT 458

Query: 309 ANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGD 368
             KVA A++ SLCQ GI+VA + +++Y KL      + + N VLS  Y+ +   IWLVGD
Sbjct: 459 --KVAYALSYSLCQRGIQVAVLHEEEYRKLNKSFNTKFESNPVLSKGYSQN---IWLVGD 513

Query: 369 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVM 428
            LT +EQ +APKGT FIP++Q+PP+ +RKDCFYH TPAM  P S+ N+HSCENWL RRVM
Sbjct: 514 GLTNEEQMKAPKGTTFIPFSQLPPKIVRKDCFYHCTPAMKAPRSIENVHSCENWLPRRVM 573

Query: 429 SAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 470
           SAWRIAG++HA+EGW  +ECG TM +I QVW A+LRHGF+P+
Sbjct: 574 SAWRIAGVVHAMEGWTEHECGYTMSNIDQVWKATLRHGFQPV 615

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504497|ref|XP_003521032.1| PREDICTED: protein WAX2-like [Glycine max]

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 293/462 (63%), Positives = 361/462 (78%), Gaps = 19/462 (4%)

Query: 9   AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
           +VIHPFAEHI YF+LFAIPL TT+V + ASIAS+ GY+ Y+DFMNN+GHCNFE IP  +F
Sbjct: 173 SVIHPFAEHIAYFVLFAIPLYTTVVTRTASIASYAGYLAYIDFMNNLGHCNFECIPKAIF 232

Query: 69  TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEE 128
           + FP LK+LMYTPS+HSLHHTQFRTNYSLFMPIYDYIYGT+D+S+D+ YE +LKR     
Sbjct: 233 SAFPFLKYLMYTPSFHSLHHTQFRTNYSLFMPIYDYIYGTMDKSTDTTYEIALKR----- 287

Query: 129 EESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVL 188
           EES    DVVHLTHLTTPESIYHLR+GFASLAS+P       S WYL L+WPFT   SVL
Sbjct: 288 EESL--ADVVHLTHLTTPESIYHLRLGFASLASRPQS-----STWYLYLMWPFTL-WSVL 339

Query: 189 VSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKV 248
           V+W YG+TFV E N    L LQ+WV+PR+ VQY   W+ E +N LIEEAIL+A+   VKV
Sbjct: 340 VTWFYGQTFVMERNAFKMLNLQSWVIPRFHVQYLFKWQSETLNKLIEEAILQAELSKVKV 399

Query: 249 ISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 308
           +SLGL NQG+ LN+ GE+Y+++ P +LKIK+VDGSSL  A+V+NS+PK  + VLL G   
Sbjct: 400 LSLGLSNQGDLLNKYGELYIKKYP-ELKIKIVDGSSLVVAIVLNSIPKEASQVLLCG--K 456

Query: 309 ANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGD 368
            NKV+ A+ S+LC+ G KV T+ KD+Y+KL+LRIP E++ NLV   SY A   KIWL+GD
Sbjct: 457 PNKVSYAIVSALCERGTKVTTMYKDEYDKLQLRIPNESKDNLVFPGSYPA---KIWLLGD 513

Query: 369 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVM 428
                +Q +APKG++FIP +Q PP+KLRKDCFYHSTPAMI PPSL N+ SCENWL RRVM
Sbjct: 514 QCNEVDQRKAPKGSLFIPISQFPPKKLRKDCFYHSTPAMIAPPSLVNVDSCENWLPRRVM 573

Query: 429 SAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 470
           SAWR+AGI+HALEGW++NECG  M  + ++  ASL+HGFRPL
Sbjct: 574 SAWRVAGILHALEGWNVNECGNVMFSVEKIRQASLQHGFRPL 615

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1209703|gb|AAB87721.1| maize gl1 homolog [Arabidopsis thaliana]

 Score =  600 bits (1548), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 287/465 (61%), Positives = 366/465 (78%), Gaps = 18/465 (3%)

Query: 9   AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
           +VIHPFAEHI YF+LFAIPL+TT+V K ASI SF GYIIY+DFMNNMGHCNFE IP  LF
Sbjct: 173 SVIHPFAEHIAYFILFAIPLLTTLVTKTASIISFAGYIIYIDFMNNMGHCNFELIPKRLF 232

Query: 69  TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEE 128
            +FPPLKFL YTPSYHSLHHTQFRTNYSLFMP+YDYIYGT+D S+D++YEK+L+R     
Sbjct: 233 HLFPPLKFLCYTPSYHSLHHTQFRTNYSLFMPLYDYIYGTMDESTDTLYEKTLERGD--- 289

Query: 129 EESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVL 188
               D VDVVHLTHLTTPESIYHLRIG  S AS P  Y     +W+++LLWPFT S S++
Sbjct: 290 ----DRVDVVHLTHLTTPESIYHLRIGLPSFASYPFAY-----RWFMRLLWPFT-SLSMI 339

Query: 189 VSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKV 248
            +  Y R FV+E N+ +KL LQ+WV+PRY +QY L WR+EAIN++IE+AILEAD KGVKV
Sbjct: 340 FTLFYARLFVAERNSFNKLNLQSWVIPRYNLQYLLKWRKEAINNMIEKAILEADKKGVKV 399

Query: 249 ISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 308
           +SLGL+NQGEELNRNGE+Y+   P+ +K+++VDGS LAAAVV+NS+PK T  V++ G +T
Sbjct: 400 LSLGLMNQGEELNRNGEVYIHNHPD-MKVRLVDGSRLAAAVVINSVPKATTSVVMTGNLT 458

Query: 309 ANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGD 368
             KVA  +AS+LCQ G++V+T+  D+YEK++  +P E + +LV  TS A    K+WLVG+
Sbjct: 459 --KVAYTIASALCQRGVQVSTLRLDEYEKIRSCVPQECRDHLVYLTSEALSSNKVWLVGE 516

Query: 369 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVM 428
             T +EQ +A KGT+FIP++Q P ++LR DC YH+TPA+I+P SL N+HSCENWL R+ M
Sbjct: 517 GTTREEQEKATKGTLFIPFSQFPLKQLRSDCIYHTTPALIVPKSLVNVHSCENWLPRKAM 576

Query: 429 SAWRIAGIIHALEGWDLNECGQT--MCDIHQVWHASLRHGFRPLF 471
           SA R+AGI+HALEGW+ +ECG +  + D+ +VW A L HGF+PL 
Sbjct: 577 SATRVAGILHALEGWETHECGTSLLLSDLDKVWEACLSHGFQPLL 621

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145361948|ref|NP_850932.2| CER1 protein [Arabidopsis thaliana] gi|110742082|dbj|BAE98972.1| CER1 protein [Arabidopsis thaliana] gi|332189279|gb|AEE27400.1| CER1 protein [Arabidopsis thaliana]

 Score =  600 bits (1546), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 289/467 (61%), Positives = 370/467 (79%), Gaps = 18/467 (3%)

Query: 7   FPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMW 66
           + AVIHPFAEHI YF+LFAIPL+TT++ K ASI SF GYIIY+DFMNNMGHCNFE IP  
Sbjct: 7   YAAVIHPFAEHIAYFILFAIPLLTTLLTKTASIISFAGYIIYIDFMNNMGHCNFELIPKR 66

Query: 67  LFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGE 126
           LF +FPPLKFL YTPSYHSLHHTQFRTNYSLFMP+YDYIYGT+D S+D++YEK+L+R   
Sbjct: 67  LFHLFPPLKFLCYTPSYHSLHHTQFRTNYSLFMPLYDYIYGTMDESTDTLYEKTLERGD- 125

Query: 127 EEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCS 186
                 D VDVVHLTHLTTPESIYHLRIG AS AS P  Y     +W+++LLWPFT S S
Sbjct: 126 ------DIVDVVHLTHLTTPESIYHLRIGLASFASYPFAY-----RWFMRLLWPFT-SLS 173

Query: 187 VLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGV 246
           ++ +  Y R FV+E N+ +KL LQ+WV+PRY +QY L WR+EAIN++IE+AILEAD KGV
Sbjct: 174 MIFTLFYARLFVAERNSFNKLNLQSWVIPRYNLQYLLKWRKEAINNMIEKAILEADKKGV 233

Query: 247 KVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGT 306
           KV+SLGL+NQGEELNRNGE+Y+   P+ +K+++VDGS LAAAVV+NS+PK T  V++ G 
Sbjct: 234 KVLSLGLMNQGEELNRNGEVYIHNHPD-MKVRLVDGSRLAAAVVINSVPKATTSVVMTGN 292

Query: 307 VTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLV 366
           +T  KVA  +AS+LCQ G++V+T+  D+YEK++  +P E + +LV  TS A    K+WLV
Sbjct: 293 LT--KVAYTIASALCQRGVQVSTLRLDEYEKIRSCVPQECRDHLVYLTSEALSSNKVWLV 350

Query: 367 GDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR 426
           G+  T +EQ +A KGT+FIP++Q P ++LR+DC YH+TPA+I+P SL N+HSCENWL R+
Sbjct: 351 GEGTTREEQEKATKGTLFIPFSQFPLKQLRRDCIYHTTPALIVPKSLVNVHSCENWLPRK 410

Query: 427 VMSAWRIAGIIHALEGWDLNECGQT--MCDIHQVWHASLRHGFRPLF 471
            MSA R+AGI+HALEGW+++ECG +  + D+ QVW A L HGF+PL 
Sbjct: 411 AMSATRVAGILHALEGWEMHECGTSLLLSDLDQVWEACLSHGFQPLL 457

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	474
TAIR|locus:2204813	627	AT1G02190 "AT1G02190" [Arabido	0.943	0.712	0.541	1.8e-133
UNIPROTKB|Q109K1	595	LOC_Os10g33250 "CER1 protein,	0.953	0.759	0.514	8.9e-125
UNIPROTKB|Q7XDI3	621	Os10g0471100 "CER1 protein, pu	0.938	0.716	0.516	2.1e-123
TAIR|locus:2040666	613	AT2G37700 "AT2G37700" [Arabido	0.691	0.535	0.513	3.8e-85
TAIR|locus:2174368	632	CER3 "ECERIFERUM 3" [Arabidops	0.924	0.693	0.367	7.5e-73
UNIPROTKB|Q6ETL8	628	P0544B02.10 "Os02g0178800 prot	0.926	0.699	0.338	1.8e-62

TAIR|locus:2204813 AT1G02190 "AT1G02190" [Arabidopsis thaliana (taxid:3702)]

 Score = 1308 (465.5 bits), Expect = 1.8e-133, P = 1.8e-133
 Identities = 254/469 (54%), Positives = 329/469 (70%)

Query:     9 AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
             +V+HPFAEHI Y LLFAIP+VT  +    SI S +GYI Y+DFMNNMGHCNFE  P  LF
Sbjct:   173 SVVHPFAEHIAYTLLFAIPMVTASLCGILSIVSIMGYITYIDFMNNMGHCNFELFPKRLF 232

Query:    69 TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGXXX 128
              +FPPLKFL YTPS+HSLHHTQFRTNYSLFMPIYD+IYGT D  +DS+YE+SL+      
Sbjct:   233 HLFPPLKFLCYTPSFHSLHHTQFRTNYSLFMPIYDFIYGTTDNLTDSLYERSLE------ 286

Query:   129 XXSADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQ-LLWPFTASCS- 186
                 +  DV+HLTHLTT  SIY +R+GF SL+S P    ++   WYL   +WPFT  CS 
Sbjct:   287 -IEEESPDVIHLTHLTTHNSIYQMRLGFPSLSSCP---LWSRPPWYLTCFMWPFTLLCSF 342

Query:   187 VLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGV 246
              L S I  RTFV E N L  L + + ++P++   Y      E+IN++IEEAILEAD KGV
Sbjct:   343 ALTSAIPLRTFVFERNRLRDLTVHSHLLPKFSFHYKSQRHHESINTIIEEAILEADEKGV 402

Query:   247 KVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGX 306
             KV+SLGL+N  EELN +GE+Y+++ P KLKI++VDGSS+AA VV+N++PK    ++ RG 
Sbjct:   403 KVMSLGLMNNREELNGSGEMYVQKYP-KLKIRLVDGSSMAATVVINNIPKEATEIVFRGN 461

Query:   307 XXXXXXXXXXXSSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLV 366
                         +LCQ G+KV  + ++++ KL   I      NLVLSTS + +  K+WLV
Sbjct:   462 LTKVASAVVF--ALCQKGVKVVVLREEEHSKL---IKSGVDKNLVLSTSNSYYSPKVWLV 516

Query:   367 GDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR 426
             GD +  +EQ +A +GT+F+P++  PP KLRKDCFY STPAM +P S  N+ SCENWLGRR
Sbjct:   517 GDGIENEEQMKAKEGTLFVPFSHFPPNKLRKDCFYQSTPAMRVPKSAQNIDSCENWLGRR 576

Query:   427 VMSAWRIAGIIHALEGWDLNECGQTMCDI---HQVWHASLRHGFRPLFP 472
             VMSAW+I GI+HALEGW+ ++CG T C++   H +W A+LRH F+PL P
Sbjct:   577 VMSAWKIGGIVHALEGWEEHDCGNT-CNVLRLHAIWEAALRHDFQPLPP 624

GO:0003824 "catalytic activity" evidence=ISS

GO:0005506 "iron ion binding" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|Q109K1 LOC_Os10g33250 "CER1 protein, putative, expressed" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 1226 (436.6 bits), Expect = 8.9e-125, P = 8.9e-125
 Identities = 242/470 (51%), Positives = 316/470 (67%)

Query:     2 FNIYYFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFE 61
             F  Y+F  VIHPFAE + Y LLF+IPL+   +   ASI +F  Y+IY+DFMNNMGHCNFE
Sbjct:   140 FLYYWFHPVIHPFAELVAYELLFSIPLIACALTGTASIIAFEMYLIYIDFMNNMGHCNFE 199

Query:    62 FIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSL 121
              +P WLFT FPPLK+LMYTPS+HSLHHTQFRTNYSLFMP YDYIY T+D+SSD++YE SL
Sbjct:   200 LVPSWLFTWFPPLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYIYNTMDKSSDTLYENSL 259

Query:   122 KRSGXXXXXSADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPF 181
             K +        + VDVVHLTHLTT  SIYH+R GFA  AS+P+     +S+WY++++WP 
Sbjct:   260 KNN-----EEEEAVDVVHLTHLTTLHSIYHMRPGFAEFASRPY-----VSRWYMRMMWPL 309

Query:   182 TASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEA 241
             +   S++++W YG +F  E N + K+++Q+W +PRY   Y L W +EAIN LIE+A+ EA
Sbjct:   310 SW-LSMVLTWTYGSSFTVERNVMKKIRMQSWAIPRYSFHYGLDWEKEAINDLIEKAVCEA 368

Query:   242 DAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHV 301
             D  G KV+SLGLLNQ   LN++GE YL + P KL  ++VDG+SLAAAVVVNS+P+ T  V
Sbjct:   369 DKNGAKVVSLGLLNQAHTLNKSGEQYLLKYP-KLGARIVDGTSLAAAVVVNSIPQGTDQV 427

Query:   302 LLRGXXXXXXXXXXXXSSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKT 361
             +L G             +LC+  IKV    K DY  LK  IP     NL  S +  A K 
Sbjct:   428 ILAGNVSKVARAVA--QALCKKNIKVTMTNKQDYHLLKPEIPETVADNLSFSKTGTA-KV 484

Query:   362 KIWLVGDDLTGKEQARAPKGTI-FIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCE 420
              +   G D   + +A+     I +  +   P    +  C Y +TPAM +P +L N+HSCE
Sbjct:   485 WLIGDGLDSAEQFRAQKGTLFIPYSQFP--PKMVRKDSCSYSTTPAMAVPKTLQNVHSCE 542

Query:   421 NWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 470
             NWL RRVMSAWRIAGI+HALEGW+ +ECG  + D+ +VW A++ HGF P+
Sbjct:   543 NWLPRRVMSAWRIAGILHALEGWNEHECGDKVLDMDKVWSAAIMHGFCPV 592

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010025 "wax biosynthetic process" evidence=IDA

GO:0010143 "cutin biosynthetic process" evidence=IDA

GO:0043668 "exine" evidence=IMP

GO:0048653 "anther development" evidence=IMP

UNIPROTKB|Q7XDI3 Os10g0471100 "CER1 protein, putative, expressed" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 1213 (432.1 bits), Expect = 2.1e-123, P = 2.1e-123
 Identities = 239/463 (51%), Positives = 313/463 (67%)

Query:     9 AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
             +VIHPFAE + Y LLF+IPL+   +   ASI +F  Y+IY+DFMNNMGHCNFE +P WLF
Sbjct:   173 SVIHPFAELVAYELLFSIPLIACALTGTASIIAFEMYLIYIDFMNNMGHCNFELVPSWLF 232

Query:    69 TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGXXX 128
             T FPPLK+LMYTPS+HSLHHTQFRTNYSLFMP YDYIY T+D+SSD++YE SLK +    
Sbjct:   233 TWFPPLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYIYNTMDKSSDTLYENSLKNN---- 288

Query:   129 XXSADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVL 188
                 + VDVVHLTHLTT  SIYH+R GFA  AS+P+     +S+WY++++WP +   S++
Sbjct:   289 -EEEEAVDVVHLTHLTTLHSIYHMRPGFAEFASRPY-----VSRWYMRMMWPLSW-LSMV 341

Query:   189 VSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKV 248
             ++W YG +F  E N + K+++Q+W +PRY   Y L W +EAIN LIE+A+ EAD  G KV
Sbjct:   342 LTWTYGSSFTVERNVMKKIRMQSWAIPRYSFHYGLDWEKEAINDLIEKAVCEADKNGAKV 401

Query:   249 ISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGXXX 308
             +SLGLLNQ   LN++GE YL + P KL  ++VDG+SLAAAVVVNS+P+ T  V+L G   
Sbjct:   402 VSLGLLNQAHTLNKSGEQYLLKYP-KLGARIVDGTSLAAAVVVNSIPQGTDQVILAGNVS 460

Query:   309 XXXXXXXXXSSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGD 368
                       +LC+  IKV    K DY  LK  IP     NL  S +  A K  +   G 
Sbjct:   461 KVARAVA--QALCKKNIKVTMTNKQDYHLLKPEIPETVADNLSFSKTGTA-KVWLIGDGL 517

Query:   369 DLTGKEQARAPKGTI-FIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRV 427
             D   + +A+     I +  +   P    +  C Y +TPAM +P +L N+HSCENWL RRV
Sbjct:   518 DSAEQFRAQKGTLFIPYSQFP--PKMVRKDSCSYSTTPAMAVPKTLQNVHSCENWLPRRV 575

Query:   428 MSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 470
             MSAWRIAGI+HALEGW+ +ECG  + D+ +VW A++ HGF P+
Sbjct:   576 MSAWRIAGILHALEGWNEHECGDKVLDMDKVWSAAIMHGFCPV 618

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010025 "wax biosynthetic process" evidence=IDA

GO:0010143 "cutin biosynthetic process" evidence=IDA

GO:0043668 "exine" evidence=IMP

GO:0048653 "anther development" evidence=IMP

TAIR|locus:2040666 AT2G37700 "AT2G37700" [Arabidopsis thaliana (taxid:3702)]

 Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
 Identities = 176/343 (51%), Positives = 228/343 (66%)

Query:     9 AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
             +V+HPFAEHI Y L+  +PL+TT +    S+ S   Y+ Y+DFMNNMGHCNFE IP +LF
Sbjct:   169 SVVHPFAEHIGYTLILGLPLITTFMCGTVSVVSIALYLTYIDFMNNMGHCNFELIPKFLF 228

Query:    69 TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGXXX 128
             ++ PPLKFL YTPS+HSLHHTQFRTNYSLFMP+YDYIYGT D  SDS+YE SL++     
Sbjct:   229 SLLPPLKFLCYTPSFHSLHHTQFRTNYSLFMPMYDYIYGTTDECSDSLYETSLEKE---- 284

Query:   129 XXSADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVL 188
                 +  D +HLTHLT+ +SIYHLR+GFASL+S P       S+ YL L+ PF    S +
Sbjct:   285 ---EEKPDAIHLTHLTSLDSIYHLRLGFASLSSHP-----LSSRCYLFLMKPFALILSFI 336

Query:   189 VSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKV 248
             +     +TFV E N    L L + ++P++   Y    ++E IN +IE AILEAD KGVKV
Sbjct:   337 LRSFSFQTFVVERNRFRDLTLHSHLLPKFSSHYMSHQQKECINKMIEAAILEADKKGVKV 396

Query:   249 ISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGXXX 308
             +SLGLLNQGEELN  GE+Y+ R P KLKI++VDG SLAA VV++S+P  T  VL RG   
Sbjct:   397 MSLGLLNQGEELNGYGEMYVRRHP-KLKIRIVDGGSLAAEVVLHSIPVGTKEVLFRGQIT 455

Query:   309 XXXXXXXXXSSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLV 351
                       SLCQ  IKV  + K+++  L   +  + + NL+
Sbjct:   456 KVARAIVF--SLCQNAIKVMVLRKEEHSMLAEFLDDKCKENLI 496

GO:0003824 "catalytic activity" evidence=ISS

GO:0005506 "iron ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2174368 CER3 "ECERIFERUM 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
 Identities = 167/455 (36%), Positives = 249/455 (54%)

Query:    16 EHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLK 75
             E+I+  ++  +PL+   +    S+++  GY +  DFM  +GHCN E     LF + P L+
Sbjct:   182 ENIILCVVAGVPLIGCCLFGVGSLSAIYGYAVMFDFMRCLGHCNVEIFSHKLFEILPVLR 241

Query:    76 FLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGXXXXXSADDV 135
             +L+YTP+YHSLHH +  TN+ LFMP++D +  T + +S  + +K    +G          
Sbjct:   242 YLIYTPTYHSLHHQEMGTNFCLFMPLFDVLGDTQNPNSWELQKKIRLSAGERKRVP---- 297

Query:   136 DVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGR 195
             + V L H     S  H    F S AS P  YT   ++ +L  +WPFT  C +L  W + +
Sbjct:   298 EFVFLAHGVDVMSAMHAPFVFRSFASMP--YT---TRIFLLPMWPFTF-CVMLGMWAWSK 351

Query:   196 TFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLN 255
             TF+    TL     QTW VPR+  QY LP+  + IN  IE AIL AD  GVKVISL  LN
Sbjct:   352 TFLFSFYTLRNNLCQTWGVPRFGFQYFLPFATKGINDQIEAAILRADKIGVKVISLAALN 411

Query:   256 QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGXXXXXXXXXX 315
             + E LN  G +++ + P+ L+++VV G++L AAV++  +PK    V L G          
Sbjct:   412 KNEALNGGGTLFVNKHPD-LRVRVVHGNTLTAAVILYEIPKDVNEVFLTGATSKLGRAIA 470

Query:   316 XXSSLCQMGIKVA--TICKDDYEKLKLRIPVEAQHNLVLSTSY-AAHKTKIWLVGDDLTG 372
                 LC+ G++V   T+  + ++K++   PVE Q+NLV  T Y AA   K W+VG  LT 
Sbjct:   471 LY--LCRRGVRVLMLTLSMERFQKIQKEAPVEFQNNLVQVTKYNAAQHCKTWIVGKWLTP 528

Query:   373 KEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWR 432
             +EQ+ AP GT F  +   P  K R++C Y    AM +P  +  + +CE  + R V+ A  
Sbjct:   529 REQSWAPAGTHFHQFVVPPILKFRRNCTYGDLAAMKLPKDVEGLGTCEYTMERGVVHACH 588

Query:   433 IAGIIHALEGWDLNECGQTMCD-IHQVWHASLRHG 466
               G++H LEGW  +E G    D I  VW A++++G
Sbjct:   589 AGGVVHMLEGWKHHEVGAIDVDRIDLVWEAAMKYG 623

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=ISS

GO:0005506 "iron ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0010025 "wax biosynthetic process" evidence=IMP

GO:0016020 "membrane" evidence=ISS

GO:0042335 "cuticle development" evidence=RCA;IMP

GO:0048235 "pollen sperm cell differentiation" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0006723 "cuticle hydrocarbon biosynthetic process" evidence=IMP

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0043447 "alkane biosynthetic process" evidence=IDA

UNIPROTKB|Q6ETL8 P0544B02.10 "Os02g0178800 protein" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 155/458 (33%), Positives = 235/458 (51%)

Query:    16 EHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLK 75
             E ++  ++  +PL    ++   S+    G+++  DF+ +MG+ N E I   +F   P L+
Sbjct:   185 ESLLLTVVIGVPLAGAFLMGVGSVGLVYGHVLLFDFLRSMGYSNVEVISPRVFQAVPLLR 244

Query:    76 FLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGXXXXXSADDV 135
             +L+YTP+Y SLHH +  +N+ LFMPI+D + GT++  S   +E  L++       +    
Sbjct:   245 YLIYTPTYLSLHHREKDSNFCLFMPIFDLLGGTLNHKS---WE--LQKE-VYLGKNDQAP 298

Query:   136 DVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGR 195
             D V L H+    +  H+     S +S P    + L  +     WP  A   +L+ W   +
Sbjct:   299 DFVFLAHVVDIMASMHVPFVLRSCSSTPFANHFVLLPF-----WP-VAFGFMLLMWCCSK 352

Query:   196 TFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLN 255
             TF+  S  L     Q W VPRY  QY +P  ++ IN  IE AIL AD  GVKV+SL  LN
Sbjct:   353 TFLVSSYRLRGNLHQMWTVPRYGFQYFIPAAKKGINEQIELAILRADRMGVKVLSLAALN 412

Query:   256 QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGXXXXXXXXXX 315
             + E LN  G +++ + P +L+++VV G++L AAV++N +P     V L G          
Sbjct:   413 KNEALNGGGTLFVNKHP-ELRVRVVHGNTLTAAVILNEIPSNVKDVFLTGATSKLGRAIA 471

Query:   316 XXSSLCQMGIKVA--TICKDDYEKLKLRIPVEAQHNLVLSTSYA-AHKTKIWLVGDDLTG 372
                 LC+  I+V   T+  + + K++   P E Q  LV  T Y  A   K WLVG  L+ 
Sbjct:   472 LY--LCRKKIRVLMLTLSSERFLKIQREAPAEFQQYLVQVTKYQPAQNCKTWLVGKWLSP 529

Query:   373 KEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWR 432
             +EQ  AP GT F  +   P    R+DC Y    AM +P  +  +  CE  + R V+ A  
Sbjct:   530 REQRWAPAGTHFHQFVVPPIIGFRRDCTYGKLAAMRLPKDVQGLGYCEYTMERGVVHACH 589

Query:   433 IAGIIHALEGWDLNECGQTMCD-IHQVWHASLRHGFRP 469
               G++H LEGW+ +E G    D I  VW A+L+HG  P
Sbjct:   590 AGGVVHFLEGWEHHEVGAIDVDRIDVVWKAALKHGLTP 627


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.138   0.436    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      474       457   0.00094  118 3  11 22  0.47    33
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  631 (67 KB)
  Total size of DFA:  319 KB (2161 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  37.30u 0.39s 37.69t   Elapsed:  00:00:02
  Total cpu time:  37.30u 0.39s 37.69t   Elapsed:  00:00:02
  Start:  Tue May 21 02:18:08 2013   End:  Tue May 21 02:18:10 2013

GO:0010025 "wax biosynthetic process" evidence=IMP

GO:0043447 "alkane biosynthetic process" evidence=IMP

GO:0046184 "aldehyde biosynthetic process" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_XIV4166 fatty aldehyde decarbonylase (EC-4.1.99.5) (622 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	474
PLN02869	620	PLN02869, PLN02869, fatty aldehyde decarbonylase	0.0
pfam12076	164	pfam12076, Wax2_C, WAX2 C-terminal domain	7e-87
pfam04116	114	pfam04116, FA_hydroxylase, Fatty acid hydroxylase	1e-06
COG3000	271	COG3000, ERG3, Sterol desaturase [Lipid metabolism	8e-06

>gnl|CDD|166510 PLN02869, PLN02869, fatty aldehyde decarbonylase

 Score =  727 bits (1877), Expect = 0.0
 Identities = 314/463 (67%), Positives = 378/463 (81%), Gaps = 20/463 (4%)

Query: 9   AVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF 68
           +VIHPFAEHI YFLLFAIPL+TT+    ASIA+F GYI Y+DFMNNMGHCNFE IP WLF
Sbjct: 173 SVIHPFAEHIAYFLLFAIPLLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLF 232

Query: 69  TVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEE 128
           ++FPPLK+LMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGT+D+SSD++YEKSLKR     
Sbjct: 233 SIFPPLKYLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDTLYEKSLKR----P 288

Query: 129 EESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVL 188
           EE     DVVHLTHLTTP+SIYHLR+GFASLASKP+       +WYL+L+WP T S S++
Sbjct: 289 EEI---PDVVHLTHLTTPDSIYHLRLGFASLASKPYIS-----KWYLRLMWPVT-SWSMM 339

Query: 189 VSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKV 248
           ++WIYGRTFV E N  +KL LQTWV+P+Y +QY L W+ E+INSLIEEAILEAD +GVKV
Sbjct: 340 LTWIYGRTFVLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIEEAILEADKRGVKV 399

Query: 249 ISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 308
           +SLGLLNQGEELNR GE+Y+ R P KLKIKVVDGSSLA AVV+NS+PK T  VL RG ++
Sbjct: 400 LSLGLLNQGEELNRYGELYIHRNP-KLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNLS 458

Query: 309 ANKVANAVASSLCQMGIKVATICKDDYEKLKLRIP-VEAQHNLVLSTSYAAHKTKIWLVG 367
             KVA  +AS+LCQ GI+VAT  +D+YEKL  ++P  E    L+LS +Y+    KIWLVG
Sbjct: 459 --KVAYFIASALCQRGIQVATFREDEYEKLNKKLPNTECGSKLLLSKNYS---EKIWLVG 513

Query: 368 DDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRV 427
           D LT +EQ +A KGT+FIP++Q PP++LRKDCFYH+TPAM+ P S  N+ SCENWL RR 
Sbjct: 514 DGLTEEEQKKASKGTLFIPFSQFPPKRLRKDCFYHTTPAMMSPKSFENVDSCENWLPRRA 573

Query: 428 MSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 470
           MSAWR+AGI+HALEGW+++ECG TM DI ++W ASL+HGFRPL
Sbjct: 574 MSAWRVAGILHALEGWNVHECGYTMFDIEKIWEASLQHGFRPL 616

Length = 620

>gnl|CDD|192933 pfam12076, Wax2_C, WAX2 C-terminal domain

 Score =  262 bits (672), Expect = 7e-87
 Identities = 106/169 (62%), Positives = 131/169 (77%), Gaps = 5/169 (2%)

Query: 301 VLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHK 360
           VLLRG  +  KVA A+A +LC+ G+KV  + K++YEKLK   P E Q NLVLSTSY A  
Sbjct: 1   VLLRGNTS--KVARAIALALCKKGVKVVMLSKEEYEKLKPEAPPEVQDNLVLSTSYTA-- 56

Query: 361 TKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCE 420
            K+WLVGD L+ +EQ +APKGT+FIP++Q PP+KLRKDCFYH+TPAM +P S  N+ SCE
Sbjct: 57  -KVWLVGDGLSPEEQMKAPKGTLFIPFSQFPPKKLRKDCFYHTTPAMKLPKSFQNLDSCE 115

Query: 421 NWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRP 469
           NWL RRVMSAWR  GI+HALEGW+ +ECG T+  I +VW A+LRHGFRP
Sbjct: 116 NWLPRRVMSAWRAGGIVHALEGWNEHECGDTVLGIDKVWEAALRHGFRP 164

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with pfam04116. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases. Length = 164

>gnl|CDD|217907 pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily

 Score = 46.7 bits (111), Expect = 1e-06
 Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 7/86 (8%)

Query: 5   YYFPAVIHPFAEH-IVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFI 63
              P  +  F  H +   LL  IPL+  ++L    +   +  ++    +    H      
Sbjct: 35  DESPNPLTAFRFHPLEALLLALIPLLLLLLLFGLHLLVILLGLLLGTLLYLFIHSGLHLW 94

Query: 64  PMWLFTVFPPLKFLMYTPSYHSLHHT 89
                     L +L  TP YH LHH+
Sbjct: 95  LPP------LLSYLFVTPRYHRLHHS 114

This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins. Length = 114

>gnl|CDD|225546 COG3000, ERG3, Sterol desaturase [Lipid metabolism]

 Score = 47.1 bits (112), Expect = 8e-06
 Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 12/99 (12%)

Query: 12  HPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVF 71
           HP  E ++   L  +PL+        S  +     I++ F   + H N +          
Sbjct: 145 HPL-EILLLAFLGLLPLLLLG----LSPVAVALLFIFLLFWAVLIHSNLDL--PLPLGWL 197

Query: 72  PPLKFLMYTPSYHSLHHTQFR--TNYSLFMPIYDYIYGT 108
               ++  TP +H LHH++     NY + +  +D ++GT
Sbjct: 198 R---YVFNTPRHHRLHHSKDPYDKNYGVTLTFWDRLFGT 233

Length = 271

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	474
PLN02869	620	fatty aldehyde decarbonylase	100.0
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	100.0
COG5322	351	Predicted dehydrogenase [General function predicti	100.0
PRK14982	340	acyl-ACP reductase; Provisional	100.0
COG3000	271	ERG3 Sterol desaturase [Lipid metabolism]	99.72
KOG0873	283	consensus C-4 sterol methyl oxidase [Lipid transpo	99.44
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	99.39
KOG0874	287	consensus Sphingolipid hydroxylase [Lipid transpor	99.21
KOG0872	312	consensus Sterol C5 desaturase [Lipid transport an	99.1
PF04116	114	FA_hydroxylase: Fatty acid hydroxylase superfamily	98.16
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.46
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.31
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.29
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.14
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.08
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	97.04
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.86
PRK08618	325	ornithine cyclodeaminase; Validated	96.8
PLN00203	519	glutamyl-tRNA reductase	96.79
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.67
PRK09186	256	flagellin modification protein A; Provisional	96.62
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.5
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.48
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.4
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.36
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.32
PLN03209	576	translocon at the inner envelope of chloroplast su	96.24
PRK06407	301	ornithine cyclodeaminase; Provisional	96.17
PF02423	313	OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst	96.16
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	96.16
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.15
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.07
CHL00194	317	ycf39 Ycf39; Provisional	96.07
PRK07340	304	ornithine cyclodeaminase; Validated	96.05
PLN02434	237	fatty acid hydroxylase	96.05
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	95.95
PRK06196	315	oxidoreductase; Provisional	95.94
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.9
PRK06949	258	short chain dehydrogenase; Provisional	95.85
PRK08339	263	short chain dehydrogenase; Provisional	95.81
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.81
PLN02780	320	ketoreductase/ oxidoreductase	95.76
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	95.74
PRK07454	241	short chain dehydrogenase; Provisional	95.73
PRK06141	314	ornithine cyclodeaminase; Validated	95.72
PRK06482	276	short chain dehydrogenase; Provisional	95.69
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.69
PRK07478	254	short chain dehydrogenase; Provisional	95.65
PRK06046	326	alanine dehydrogenase; Validated	95.65
PRK05867	253	short chain dehydrogenase; Provisional	95.61
PRK06101	240	short chain dehydrogenase; Provisional	95.59
PRK06823	315	ornithine cyclodeaminase; Validated	95.58
PRK08265	261	short chain dehydrogenase; Provisional	95.57
PRK06924	251	short chain dehydrogenase; Provisional	95.57
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.52
PRK06194	287	hypothetical protein; Provisional	95.51
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	95.51
PRK08643	256	acetoin reductase; Validated	95.5
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.48
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.46
PRK08251	248	short chain dehydrogenase; Provisional	95.46
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.45
PRK07109	334	short chain dehydrogenase; Provisional	95.44
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.43
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.41
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	95.4
PRK09291	257	short chain dehydrogenase; Provisional	95.37
PRK07063	260	short chain dehydrogenase; Provisional	95.37
PRK07825	273	short chain dehydrogenase; Provisional	95.36
PRK07589	346	ornithine cyclodeaminase; Validated	95.34
PRK07024	257	short chain dehydrogenase; Provisional	95.3
PRK07890	258	short chain dehydrogenase; Provisional	95.3
PRK05854	313	short chain dehydrogenase; Provisional	95.27
PRK08267	260	short chain dehydrogenase; Provisional	95.25
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	95.25
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	95.22
TIGR02415	254	23BDH acetoin reductases. One member of this famil	95.2
PRK06500	249	short chain dehydrogenase; Provisional	95.19
PRK07774	250	short chain dehydrogenase; Provisional	95.17
PRK07067	257	sorbitol dehydrogenase; Provisional	95.16
PRK07326	237	short chain dehydrogenase; Provisional	95.16
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.14
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.14
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.13
PRK07097	265	gluconate 5-dehydrogenase; Provisional	95.12
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.11
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	95.1
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.09
PRK05993	277	short chain dehydrogenase; Provisional	95.08
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.07
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	95.06
PRK05884	223	short chain dehydrogenase; Provisional	95.06
PRK05872	296	short chain dehydrogenase; Provisional	95.06
PRK06199	379	ornithine cyclodeaminase; Validated	95.05
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	95.05
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	95.04
PRK08017	256	oxidoreductase; Provisional	95.02
PRK07831	262	short chain dehydrogenase; Provisional	94.99
PLN02896	353	cinnamyl-alcohol dehydrogenase	94.98
PRK06197	306	short chain dehydrogenase; Provisional	94.97
PRK07062	265	short chain dehydrogenase; Provisional	94.96
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.96
PRK12829	264	short chain dehydrogenase; Provisional	94.94
KOG1370	434	consensus S-adenosylhomocysteine hydrolase [Coenzy	94.93
PRK06124	256	gluconate 5-dehydrogenase; Provisional	94.93
PRK05866	293	short chain dehydrogenase; Provisional	94.92
KOG1208	314	consensus Dehydrogenases with different specificit	94.92
PRK06947	248	glucose-1-dehydrogenase; Provisional	94.91
PRK07102	243	short chain dehydrogenase; Provisional	94.91
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	94.88
PRK06139	330	short chain dehydrogenase; Provisional	94.86
PRK06180	277	short chain dehydrogenase; Provisional	94.86
PLN02253	280	xanthoxin dehydrogenase	94.83
PRK05717	255	oxidoreductase; Validated	94.81
PRK12746	254	short chain dehydrogenase; Provisional	94.79
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	94.78
PRK06057	255	short chain dehydrogenase; Provisional	94.78
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	94.77
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.77
PRK09135	249	pteridine reductase; Provisional	94.75
PRK10538	248	malonic semialdehyde reductase; Provisional	94.74
COG2910	211	Putative NADH-flavin reductase [General function p	94.73
PRK09072	263	short chain dehydrogenase; Provisional	94.72
PRK08213	259	gluconate 5-dehydrogenase; Provisional	94.71
COG2423	330	Predicted ornithine cyclodeaminase, mu-crystallin	94.68
PRK05875	276	short chain dehydrogenase; Provisional	94.68
PRK12828	239	short chain dehydrogenase; Provisional	94.67
PRK06182	273	short chain dehydrogenase; Validated	94.67
PRK08862	227	short chain dehydrogenase; Provisional	94.67
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	94.66
PRK08703	239	short chain dehydrogenase; Provisional	94.65
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	94.62
PRK05876	275	short chain dehydrogenase; Provisional	94.62
PRK12742	237	oxidoreductase; Provisional	94.6
PRK07074	257	short chain dehydrogenase; Provisional	94.59
PTZ00075	476	Adenosylhomocysteinase; Provisional	94.54
PRK07453	322	protochlorophyllide oxidoreductase; Validated	94.53
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.48
PRK07035	252	short chain dehydrogenase; Provisional	94.47
PRK12939	250	short chain dehydrogenase; Provisional	94.47
PRK06138	252	short chain dehydrogenase; Provisional	94.45
PRK08263	275	short chain dehydrogenase; Provisional	94.43
PRK06172	253	short chain dehydrogenase; Provisional	94.42
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	94.38
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	94.38
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	94.38
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	94.37
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.36
PRK08177	225	short chain dehydrogenase; Provisional	94.36
PRK07832	272	short chain dehydrogenase; Provisional	94.35
PRK07677	252	short chain dehydrogenase; Provisional	94.34
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	94.31
PRK06125	259	short chain dehydrogenase; Provisional	94.31
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	94.3
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	94.3
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.29
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.29
PRK05599	246	hypothetical protein; Provisional	94.28
PRK08277	278	D-mannonate oxidoreductase; Provisional	94.2
PRK05693	274	short chain dehydrogenase; Provisional	94.19
PRK08589	272	short chain dehydrogenase; Validated	94.18
PRK06914	280	short chain dehydrogenase; Provisional	94.16
PRK05650	270	short chain dehydrogenase; Provisional	94.13
PRK06953	222	short chain dehydrogenase; Provisional	94.13
PRK07814	263	short chain dehydrogenase; Provisional	94.11
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	94.11
PRK07806	248	short chain dehydrogenase; Provisional	94.09
PRK09242	257	tropinone reductase; Provisional	94.07
PRK07060	245	short chain dehydrogenase; Provisional	94.03
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	94.03
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	94.02
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	93.98
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	93.98
PRK07069	251	short chain dehydrogenase; Validated	93.97
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	93.97
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.96
PLN02583	297	cinnamoyl-CoA reductase	93.92
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	93.91
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	93.91
PLN02650	351	dihydroflavonol-4-reductase	93.91
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	93.89
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.88
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	93.88
PRK07775	274	short chain dehydrogenase; Provisional	93.85
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.81
PRK07904	253	short chain dehydrogenase; Provisional	93.8
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	93.72
PLN00198	338	anthocyanidin reductase; Provisional	93.72
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.71
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	93.71
PRK08303	305	short chain dehydrogenase; Provisional	93.69
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	93.67
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	93.66
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	93.64
PRK06181	263	short chain dehydrogenase; Provisional	93.64
PRK08264	238	short chain dehydrogenase; Validated	93.64
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	93.63
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.62
PRK06484	520	short chain dehydrogenase; Validated	93.6
PRK09134	258	short chain dehydrogenase; Provisional	93.55
PRK08291	330	ectoine utilization protein EutC; Validated	93.54
PRK07576	264	short chain dehydrogenase; Provisional	93.54
PRK08278	273	short chain dehydrogenase; Provisional	93.53
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.51
PRK12827	249	short chain dehydrogenase; Provisional	93.51
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	93.48
PRK06841	255	short chain dehydrogenase; Provisional	93.45
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	93.44
PRK08219	227	short chain dehydrogenase; Provisional	93.33
PF10520	178	Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme	93.33
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	93.32
PRK00676	338	hemA glutamyl-tRNA reductase; Validated	93.29
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	93.28
PRK12743	256	oxidoreductase; Provisional	93.25
PLN02427	386	UDP-apiose/xylose synthase	93.23
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	93.22
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	93.21
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	93.17
PRK08628	258	short chain dehydrogenase; Provisional	93.16
PRK06128	300	oxidoreductase; Provisional	93.11
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	93.06
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.04
PRK06179	270	short chain dehydrogenase; Provisional	93.03
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.02
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	93.01
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.0
PRK12937	245	short chain dehydrogenase; Provisional	92.93
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.92
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.92
PLN02214	342	cinnamoyl-CoA reductase	92.91
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	92.88
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	92.85
PRK12747	252	short chain dehydrogenase; Provisional	92.85
PRK07041	230	short chain dehydrogenase; Provisional	92.84
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.84
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	92.8
PRK06123	248	short chain dehydrogenase; Provisional	92.75
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	92.69
PRK08936	261	glucose-1-dehydrogenase; Provisional	92.69
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	92.55
PRK07985	294	oxidoreductase; Provisional	92.51
PRK12935	247	acetoacetyl-CoA reductase; Provisional	92.5
PRK06484	520	short chain dehydrogenase; Validated	92.49
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.47
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.44
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	92.42
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	92.38
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	92.36
PRK09496	453	trkA potassium transporter peripheral membrane com	92.34
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	92.33
PRK06483	236	dihydromonapterin reductase; Provisional	92.32
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.29
PLN02494	477	adenosylhomocysteinase	92.24
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	92.22
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	92.14
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	92.13
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	92.08
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	92.05
PRK06720	169	hypothetical protein; Provisional	92.03
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	91.97
PRK06114	254	short chain dehydrogenase; Provisional	91.96
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	91.95
PRK06198	260	short chain dehydrogenase; Provisional	91.94
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.92
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	91.92
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.9
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.89
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	91.87
PRK07577	234	short chain dehydrogenase; Provisional	91.86
PRK07856	252	short chain dehydrogenase; Provisional	91.85
PLN02686	367	cinnamoyl-CoA reductase	91.85
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	91.8
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	91.8
PRK05855	582	short chain dehydrogenase; Validated	91.72
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	91.69
PRK08226	263	short chain dehydrogenase; Provisional	91.65
KOG0725	270	consensus Reductases with broad range of substrate	91.65
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	91.65
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	91.63
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	91.58
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.55
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.51
PRK07023	243	short chain dehydrogenase; Provisional	91.5
PRK07201	657	short chain dehydrogenase; Provisional	91.5
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.42
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	91.38
PLN02778	298	3,5-epimerase/4-reductase	91.35
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	91.27
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	91.24
PRK12938	246	acetyacetyl-CoA reductase; Provisional	91.23
TIGR00658	304	orni_carb_tr ornithine carbamoyltransferase. Most	91.2
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.2
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.16
PRK06523	260	short chain dehydrogenase; Provisional	91.16
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.14
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	91.08
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	91.07
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	91.02
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	91.0
PRK07791	286	short chain dehydrogenase; Provisional	90.94
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	90.9
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	90.81
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.8
PRK12744	257	short chain dehydrogenase; Provisional	90.77
PRK06398	258	aldose dehydrogenase; Validated	90.66
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	90.55
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	90.46
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	90.4
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	90.31
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	90.26
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	90.19
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	90.18
PRK06940	275	short chain dehydrogenase; Provisional	90.17
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	90.13
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.09
PRK06701	290	short chain dehydrogenase; Provisional	90.03
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.01
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.95
PRK08309	177	short chain dehydrogenase; Provisional	89.95
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	89.85
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.82
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	89.79
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	89.75
PRK01713	334	ornithine carbamoyltransferase; Provisional	89.72
PLN02695	370	GDP-D-mannose-3',5'-epimerase	89.63
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	89.63
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	89.48
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	89.31
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	89.12
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.04
PRK08655	437	prephenate dehydrogenase; Provisional	88.97
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	88.95
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	88.91
PRK14168	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	88.9
PRK02102	331	ornithine carbamoyltransferase; Validated	88.88
PRK08324	681	short chain dehydrogenase; Validated	88.83
PLN00015	308	protochlorophyllide reductase	88.8
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	88.78
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	88.56
PRK12824	245	acetoacetyl-CoA reductase; Provisional	88.53
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	88.5
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	88.44
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	88.4
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	88.39
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	88.38
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	88.38
PRK07417	279	arogenate dehydrogenase; Reviewed	88.35
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	88.23
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	88.18
PRK14174	295	bifunctional 5,10-methylene-tetrahydrofolate dehyd	88.17
PRK13243	333	glyoxylate reductase; Reviewed	88.16
PRK12562	334	ornithine carbamoyltransferase subunit F; Provisio	88.01
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	87.97
PRK00779	304	ornithine carbamoyltransferase; Provisional	87.97
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	87.94
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	87.82
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	87.77
PLN02928	347	oxidoreductase family protein	87.74
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	87.73
PLN03139	386	formate dehydrogenase; Provisional	87.73
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	87.67
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	87.65
PRK12367	245	short chain dehydrogenase; Provisional	87.58
COG1028	251	FabG Dehydrogenases with different specificities (	87.48
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	87.45
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	87.43
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	87.24
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	86.9
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	86.76
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	86.65
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	86.59
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	86.53
TIGR01746	367	Thioester-redct thioester reductase domain. It has	86.52
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.33
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	86.3
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	86.27
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	86.24
PRK02255	338	putrescine carbamoyltransferase; Provisional	86.21
COG3268	382	Uncharacterized conserved protein [Function unknow	85.89
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	85.8
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	85.59
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	85.57
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	85.42
KOG0539	240	consensus Sphingolipid fatty acid hydroxylase [Lip	85.28
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	85.16
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	85.11
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	85.05
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	85.02
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	84.98
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	84.78
PLN02653	340	GDP-mannose 4,6-dehydratase	84.76
PRK09496	453	trkA potassium transporter peripheral membrane com	84.76
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	84.72
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	84.7
PRK07574	385	formate dehydrogenase; Provisional	84.69
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	84.64
PLN02527	306	aspartate carbamoyltransferase	84.6
PLN00016	378	RNA-binding protein; Provisional	84.54
COG0569	225	TrkA K+ transport systems, NAD-binding component [	84.42
PRK10675	338	UDP-galactose-4-epimerase; Provisional	84.39
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	84.31
PLN00112	444	malate dehydrogenase (NADP); Provisional	84.1
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	84.08
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	84.04
KOG0409	327	consensus Predicted dehydrogenase [General functio	83.93
PTZ00354	334	alcohol dehydrogenase; Provisional	83.92
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	83.61
TIGR02437	714	FadB fatty oxidation complex, alpha subunit FadB.	83.54
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	83.35
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	83.31
PRK05442	326	malate dehydrogenase; Provisional	83.28
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	83.15
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	83.11
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	83.1
COG0499	420	SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me	83.08
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	83.05
PRK12480	330	D-lactate dehydrogenase; Provisional	82.83
PLN02858	1378	fructose-bisphosphate aldolase	82.74
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	82.51
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	82.43
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	82.31
PLN02206	442	UDP-glucuronate decarboxylase	82.26
PRK04284	332	ornithine carbamoyltransferase; Provisional	82.25
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	82.23
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	82.03
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	82.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	82.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	81.99
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	81.99
PRK06223	307	malate dehydrogenase; Reviewed	81.85
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	81.79
PLN02240	352	UDP-glucose 4-epimerase	81.67
PRK11891	429	aspartate carbamoyltransferase; Provisional	81.56
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	81.55
PLN02996	491	fatty acyl-CoA reductase	81.34
PLN02572	442	UDP-sulfoquinovose synthase	81.24
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	81.21
PLN02166	436	dTDP-glucose 4,6-dehydratase	81.13
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	81.1
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	80.95
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	80.81
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	80.79
PRK09009	235	C factor cell-cell signaling protein; Provisional	80.74
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	80.69
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	80.56
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	80.52
PLN02602	350	lactate dehydrogenase	80.38
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	80.37
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	80.12
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	80.06
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	80.04

>PLN02869 fatty aldehyde decarbonylase

Probab=100.00  E-value=4e-153  Score=1217.52  Aligned_cols=451  Identities=69%  Similarity=1.201  Sum_probs=435.6

Q ss_pred             cceeeccccCChHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhhccccceecccccccCCCceeeccCcc
Q 011973            3 NIYYFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPS   82 (474)
Q Consensus         3 ~~~~~Ts~~hhplE~li~~~l~~iPLl~~~~l~g~s~~~i~~y~l~~~~~~~~gHsNve~~P~~l~~~~p~Lkyli~TP~   82 (474)
                      ++.++|+..||+.|++.+.+++++|+++.++.+..|+.++++|+++.+++++++|||+|++|+++++.+|+++|+++||+
T Consensus       167 ~~~P~Ts~~HP~~E~L~y~ll~~IPLllli~~g~~hi~t~~~yli~~~f~~~~gHSN~El~P~~~~~~~ppLkyll~TPs  246 (620)
T PLN02869        167 VTEPITSVIHPFAEHIAYFLLFAIPLLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLKYLMYTPS  246 (620)
T ss_pred             CCCchhhhcCcHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhcccccCccccccchhccCCcchheecCch
Confidence            46678888888889999999999999988778788999999999999999999999999999999998999999999999


Q ss_pred             hhhhhhhCCCCCcccchhHHHHhcCCCCCCChhHHHHHhhcCCcccccccCCccEEEeeccCCccchhccccccccccCC
Q 011973           83 YHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASK  162 (474)
Q Consensus        83 ~H~lHHs~~~~NYg~~f~lWDrLFGT~~~~~~~~~e~~~~r~~~~~~~~~~~pd~v~l~H~t~~~s~~h~~~g~~~~as~  162 (474)
                      ||++||+++++|||++|++|||+|||+++++|++|++..+  +.++     +||||||||+||++|+||+|+||+|+||.
T Consensus       247 fHdlHHs~fd~NYGlfF~~WDrLFGT~d~~s~~l~e~~~~--~~~~-----~pd~V~l~H~t~~~s~~h~~~~~~s~as~  319 (620)
T PLN02869        247 YHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDTLYEKSLK--RPEE-----IPDVVHLTHLTTPDSIYHLRLGFASLASK  319 (620)
T ss_pred             HHhHHhccCCcCcccchHHHHhccCCCCCCchhHHHHhhc--Cccc-----CCCEEEEeccCCHHHhhccchHHHHhccC
Confidence            9999999999999999999999999999999999999988  4343     89999999999999999999999999999


Q ss_pred             CCcccccccccccccchhhHHHHHHHHHHhhcceEEeeccccCceeeeEEEecccCcccccchhHHHHHHHHHHHHHHHH
Q 011973          163 PHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEAD  242 (474)
Q Consensus       163 p~~~~~~~~~w~~~p~~P~~~~~~~~~~w~~g~~f~~~~~~~~~~~~~tw~iPr~~~~y~~~~~~~~in~~Ie~Ai~~A~  242 (474)
                      ||+     ++||+|||||+++.+|+++ |++||+|++|+|+|+|+++|||+||||||||++|+++++||++||+||++||
T Consensus       320 p~~-----~~~~l~~~wp~~~~~m~~~-w~~~~~f~~~~~~~~~~~~~tw~vpr~~~qy~~~~~~~~in~~Ie~ail~ad  393 (620)
T PLN02869        320 PYI-----SKWYLRLMWPVTSWSMMLT-WIYGRTFVLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIEEAILEAD  393 (620)
T ss_pred             Ccc-----chhHHHHHHHHHHHHHHHH-HHhCCceEeeeeeccceeeeEEEeccccccccCchhhhhHHHHHHHHHHHHH
Confidence            999     8999999999999999999 6999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCcEEEeccccccccccccCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhc
Q 011973          243 AKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQ  322 (474)
Q Consensus       243 k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~  322 (474)
                      |+|+||+|||+|||+|+|||+|++||+|||+ ||||||||||||||||+|+||++++|||++|||+  |||||||.+|||
T Consensus       394 ~~Gvkv~sLg~LNk~~~LN~~G~l~v~k~p~-L~vrvv~G~tLtaAvvln~ip~~~~~vfl~G~~s--K~~raia~~lc~  470 (620)
T PLN02869        394 KRGVKVLSLGLLNQGEELNRYGELYIHRNPK-LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNLS--KVAYFIASALCQ  470 (620)
T ss_pred             hcCCEEEechhcchhhhhcCCceEeeecCCC-cceEEEeCCchHHHHHHHhcCCCCceEEEecCcc--HHHHHHHHHHHh
Confidence            9999999999999999999999999999999 9999999999999999999999999999999997  999999999999


Q ss_pred             cCcEEEecchhhHHHHHhhCcc-ccccceeeecccccCceeEEEEcCcCChhhhhcCCCCceeecccccCccCCCCCeee
Q 011973          323 MGIKVATICKDDYEKLKLRIPV-EAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFY  401 (474)
Q Consensus       323 ~~v~v~l~~~~~~~~l~~~~~~-~~~~~l~~~t~~~~~~~~vwivg~~i~~~eq~~a~~G~~f~~~~~v~p~~~R~dc~y  401 (474)
                      ||||++..++|||++||+|++. ++|++|+++|+|   +||+|||||+++++||+||||||+||||||+|+++.||||+|
T Consensus       471 r~i~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~k~w~vg~~~~~~eq~~A~~gt~f~~~~~~p~~~~R~dC~Y  547 (620)
T PLN02869        471 RGIQVATFREDEYEKLNKKLPNTECGSKLLLSKNY---SEKIWLVGDGLTEEEQKKASKGTLFIPFSQFPPKRLRKDCFY  547 (620)
T ss_pred             cCCeEeecCHHHHHHHHHhccchhhhhhEEEeecc---CceeEEecCCCCHHHHhhCCCCCeecccccCCchhhhccccc
Confidence            9999655899999999999999 899999999999   999999999999999999999999999999999999999999


Q ss_pred             ecCCccccCCCCccccccccccCcchhHHHHHhhhhhhhcCCCCCccchh-hhhHHHHHHHHHhCCCccCCCC
Q 011973          402 HSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQT-MCDIHQVWHASLRHGFRPLFPV  473 (474)
Q Consensus       402 ~~~~am~vP~~~~~~~~~e~~~prr~~~Ac~a~~~v~alEgw~~~e~G~i-v~~id~iw~aa~kHGF~p~~~~  473 (474)
                      .++|||++|+++||++|||||||||+|+||||||||||||||++|||| | |++||++|+||+||||+|+...
T Consensus       548 ~~~pam~~p~~~~~~~sce~~l~r~v~~a~~~~givh~legw~~he~g-~~v~~id~~W~aal~hgf~p~~~~  619 (620)
T PLN02869        548 HTTPAMMSPKSFENVDSCENWLPRRAMSAWRVAGILHALEGWNVHECG-YTMFDIEKIWEASLQHGFRPLLIP  619 (620)
T ss_pred             cCCccccCChhhcccchhhccccchhhhHhhhcceeeeecCccccccc-cccccHHHHHHHHHHcCCccCCCC
Confidence            999999999999999999999999999999999999999999999999 8 9999999999999999998754

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=100.00  E-value=3.8e-68  Score=486.15  Aligned_cols=164  Identities=61%  Similarity=1.106  Sum_probs=160.1

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccccCceeEEEEcCcCChhhhhcCCC
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPK  380 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~~vwivg~~i~~~eq~~a~~  380 (474)
                      |||+|+++  |||||||.+||||||||+|.++|+|++||++++.+++.||+++|+|   ++|+|||||+|+++||+||||
T Consensus         1 V~L~G~~s--KvaraiA~~LC~rgv~V~m~~~~~y~~lk~~~~~~~~~~Lv~~~~~---~~K~WlVGd~l~~~EQ~~Ap~   75 (164)
T PF12076_consen    1 VFLTGNTS--KVARAIALALCRRGVQVVMLSKERYESLKSEAPEECQSNLVQSTSY---QAKTWLVGDGLTEEEQKWAPK   75 (164)
T ss_pred             Ceeccccc--HHHHHHHHHHHhcCCEEEEecHHHHHHHHHHcCHHhhccEEeecCC---CceeEEeCCCCCHHHHhcCCC
Confidence            79999996  9999999999999999999999999999999999999999999999   779999999999999999999


Q ss_pred             CceeecccccCccCCCCCeeeecCCccccCCCCccccccccccCcchhHHHHHhhhhhhhcCCCCCccchhhhhHHHHHH
Q 011973          381 GTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWH  460 (474)
Q Consensus       381 G~~f~~~~~v~p~~~R~dc~y~~~~am~vP~~~~~~~~~e~~~prr~~~Ac~a~~~v~alEgw~~~e~G~iv~~id~iw~  460 (474)
                      ||+|||||||||+++||||+|+++|||++|++++|+||||||||||+|+||||||||||||||++||||.-|++||++|+
T Consensus        76 Gt~FipfsqfP~~~~RkDC~Y~~tPAM~~P~~~~nl~sCEnwlpRrVmsAwr~aGivHaLEgW~~HEcG~~v~~idkvW~  155 (164)
T PF12076_consen   76 GTHFIPFSQFPPKKVRKDCTYHSTPAMKVPKSMENLHSCENWLPRRVMSAWRAAGIVHALEGWNHHECGDDVDRIDKVWE  155 (164)
T ss_pred             CCEEeeccCCCcHHHhCCCcccCcccccCChhhhhhhhhhccchhhHHHHHhhhhhhhhhcCCcccccCcccccHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999933999999999


Q ss_pred             HHHhCCCcc
Q 011973          461 ASLRHGFRP  469 (474)
Q Consensus       461 aa~kHGF~p  469 (474)
                      ||++|||+|
T Consensus       156 AAl~HGF~P  164 (164)
T PF12076_consen  156 AALKHGFRP  164 (164)
T ss_pred             HHHHcCCCC
Confidence            999999998

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>COG5322 Predicted dehydrogenase [General function prediction only]

Probab=100.00  E-value=3.6e-49  Score=387.27  Aligned_cols=304  Identities=19%  Similarity=0.216  Sum_probs=254.5

Q ss_pred             CccEEEeeccCC---ccc--hhccccccccccCCCCccccccccccc-ccchhhHHHHHHHHHHhhcceEEeeccccCce
Q 011973          134 DVDVVHLTHLTT---PES--IYHLRIGFASLASKPHRYTYTLSQWYL-QLLWPFTASCSVLVSWIYGRTFVSESNTLDKL  207 (474)
Q Consensus       134 ~pd~v~l~H~t~---~~s--~~h~~~g~~~~as~p~~~~~~~~~w~~-~p~~P~~~~~~~~~~w~~g~~f~~~~~~~~~~  207 (474)
                      .-+|++|+|+|+   .|+  +...++||..+|.+.|..    .+||. .|  |+.++.|-+.| +.|+.+       ++.
T Consensus         9 ~~~fG~I~h~Ts~~l~ehv~~v~~~~~~~~~ad~g~~~----DfW~~~~~--~~~aD~~rI~s-aqG~vi-------eg~   74 (351)
T COG5322           9 KEMFGLIGHLTSARLLEHVQAVAKRLGYPEYADQGLPM----DFWCSPAP--PQMADEMRIRS-AQGKVI-------EGY   74 (351)
T ss_pred             hhhcceecccchHhHhhhhhhhhhhcCChHHHhcCCCc----cccccCCc--cccccceEEEe-ecccEE-------EEE
Confidence            558999999999   887  899999999999999942    38997 57  99999999999 999999       999


Q ss_pred             eeeEEEecccCcccccchhHHHHHHHHHHHHHHHHHcCCcEEEeccccccccccccCce-eeecCCCCcc-eeeecCChh
Q 011973          208 KLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEI-YLERQPNKLK-IKVVDGSSL  285 (474)
Q Consensus       208 ~~~tw~iPr~~~~y~~~~~~~~in~~Ie~Ai~~A~k~G~kV~~LG~ln~~e~ln~~g~l-~v~k~p~~L~-irvv~Gnsl  285 (474)
                      +++++++|+    ++..+ .+++.|.+.+|++.|+|.|++|++||+|+|   +.++-+. .+.|+|. |. +|+|||||+
T Consensus        75 l~~~pllpe----~~~s~-pkaatrrvl~a~~~a~~~Ga~V~gLGgFss---IVgn~~~n~q~~~~e-~t~~~~ttgns~  145 (351)
T COG5322          75 LVESPLLPE----MLRSR-PKAATRRVLNAMALAQKLGADVTGLGGFSS---IVGNLGQNVQVRNVE-LTFTRFTTGNSH  145 (351)
T ss_pred             EEccccCHH----HHhhC-HHHHHHHHHHHHHHHHHcCCeEEeecchhh---hhccccccccccceE-EEEEecccCCcc
Confidence            999999999    88866 888888899999999999999999999999   6664333 4568999 88 999999999


Q ss_pred             HHHHHHhcCcC---------CCcEEEEeccCCCchhHHHHHHHHh-ccCcEEEe------cchhhHHHHHhhCccccccc
Q 011973          286 AAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT------ICKDDYEKLKLRIPVEAQHN  349 (474)
Q Consensus       286 taAvvl~~ip~---------~~~~V~l~Gatg~~kig~ava~~L~-~~~v~v~l------~~~~~~~~l~~~~~~~~~~~  349 (474)
                      ||+++|.++.+         ..++|.+|||||  +||++||+||+ +-++++++      +++++++.||+++..+.   
T Consensus       146 Tayaa~r~Vl~~~~~lGidlsqatvaivGa~G--~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~---  220 (351)
T COG5322         146 TAYAACRQVLKHFAQLGIDLSQATVAIVGATG--DIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGK---  220 (351)
T ss_pred             chHHHHHHHHHHHHHhCcCHHHCeEEEecCCc--hHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCe---
Confidence            99999999977         488999999999  99999999999 78888887      67778888888877776   


Q ss_pred             eeeeccccc--CceeEEEE----cCcCChhhhhcCCCCceeecccc---cCcc-CCCCCeeeecCCccccCCC--Ccccc
Q 011973          350 LVLSTSYAA--HKTKIWLV----GDDLTGKEQARAPKGTIFIPYTQ---IPPR-KLRKDCFYHSTPAMIIPPS--LSNMH  417 (474)
Q Consensus       350 l~~~t~~~~--~~~~vwiv----g~~i~~~eq~~a~~G~~f~~~~~---v~p~-~~R~dc~y~~~~am~vP~~--~~~~~  417 (474)
                      ++ +++|+.  ++..+|++    |-.|.|+.+   +||...+|=..   +++. +-|.|+..+.++.+.-|.+  |..+.
T Consensus       221 i~-s~d~~~~~e~i~v~vAs~~~g~~I~pq~l---kpg~~ivD~g~P~dvd~~vk~~~~V~Ii~GGlV~~s~~it~gi~~  296 (351)
T COG5322         221 IM-SLDYALPQEDILVWVASMPKGVEIFPQHL---KPGCLIVDGGYPKDVDTSVKNVGGVRIIPGGLVEHSLDITWGIMK  296 (351)
T ss_pred             ee-eccccccccceEEEEeecCCCceechhhc---cCCeEEEcCCcCcccccccccCCCeEEecCccccCccccchhHHH
Confidence            33 555653  56677994    445666655   67777766652   3333 4446677777777777775  66665


Q ss_pred             ccccccCcchhHHHHHhhhhhhhcCCCCC-ccch-h-hhhHHHHHHHHHhCCCccCC
Q 011973          418 SCENWLGRRVMSAWRIAGIIHALEGWDLN-ECGQ-T-MCDIHQVWHASLRHGFRPLF  471 (474)
Q Consensus       418 ~~e~~~prr~~~Ac~a~~~v~alEgw~~~-e~G~-i-v~~id~iw~aa~kHGF~p~~  471 (474)
                      ..+|  |.|+++||.||+||+++|||++| +||| | +|||++|.++|.||||+|+.
T Consensus       297 ~~~~--p~~~l~aClAEtlil~~eg~~~~fS~Grq~~~dk~~~ig~~aekhGF~p~~  351 (351)
T COG5322         297 IVGM--PVRQLFACLAETLILEFEGEHTNFSWGRQILVDKMEFIGDAAEKHGFKPLD  351 (351)
T ss_pred             Hccc--chhhHHHHHHHHHHHHhcchhhhccccccccHHHHHHHHHHHHHcCCCCCC
Confidence            5555  99999999999999999999999 5999 8 99999999999999999964

>PRK14982 acyl-ACP reductase; Provisional

Probab=100.00  E-value=4.1e-48  Score=395.38  Aligned_cols=300  Identities=18%  Similarity=0.244  Sum_probs=250.8

Q ss_pred             cEEEeeccCCccc--hhccccccccccCCCCcccccccccccccchhhHHHHHHHHHHhhcceEEeeccccCceeeeEEE
Q 011973          136 DVVHLTHLTTPES--IYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWV  213 (474)
Q Consensus       136 d~v~l~H~t~~~s--~~h~~~g~~~~as~p~~~~~~~~~w~~~p~~P~~~~~~~~~~w~~g~~f~~~~~~~~~~~~~tw~  213 (474)
                      ||+||.|+|++++  ..+..+||+.++...+.      .||+.|  |+.+..+.++| .+|+++       +|.++.+++
T Consensus         1 ~f~fi~H~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~--p~~~~~~~v~S-~~g~~~-------eg~~i~~~~   64 (340)
T PRK14982          1 MFGLIGHLTSLEHAQRVARELGYDEYADQDLD------FWCSAP--PQLVDHIEVTS-ATGQTI-------EGKYIESCF   64 (340)
T ss_pred             CEEEEeccCCHHHhHHHHhcCCccccChHhHH------HHhhCC--CeEeeeEEEEe-CCCCEE-------EEEEEeCCC
Confidence            7999999999998  45999999999999998      799999  99999999999 999999       999999999


Q ss_pred             ecccCcccccchhHHHHHHHHHHHHHHHHHcCCcEEEeccccccccccccCceeeecCCC--Ccce---eeecCChhHHH
Q 011973          214 VPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPN--KLKI---KVVDGSSLAAA  288 (474)
Q Consensus       214 iPr~~~~y~~~~~~~~in~~Ie~Ai~~A~k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~--~L~i---rvv~GnsltaA  288 (474)
                      .|+    ++...+.+.+.++|++|+..|+|.|++|++||+|++   +.+++. .+.++.+  .++|   +|||||||||+
T Consensus        65 ~pe----~l~~~~~~~~~~~~~~a~~~a~~~G~~i~~Lg~~ts---iv~~~~-~~~~~~~~r~i~ie~~~~TtGNs~T~~  136 (340)
T PRK14982         65 LPE----MLSNRRFKTARRKVLNAMALAQKKGINITALGGFSS---IIFENF-NLLQHKQVRNTTLEWERFTTGNTHTAY  136 (340)
T ss_pred             CHH----HHhccChHHHHHHHHHHHHHHHHCCCeEEEcCChHH---HhcCCc-ccccccccccceeccccccCCchhHHH
Confidence            998    887767777767799999999999999999999999   765552 3332211  1445   89999999999


Q ss_pred             HHHhcCcC---------CCcEEEEeccCCCchhHHHHHHHHhc-cCc-EEEe--cchhhHHHHHhhCccccccceeeecc
Q 011973          289 VVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQ-MGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS  355 (474)
Q Consensus       289 vvl~~ip~---------~~~~V~l~Gatg~~kig~ava~~L~~-~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~  355 (474)
                      +.+++++.         ..++|+|+||+|  +||+.+|+.|++ .|+ ++++  |++++++.+++++..+.   +.   +
T Consensus       137 ll~~~V~la~~~lg~~l~~k~VLVtGAtG--~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~---i~---~  208 (340)
T PRK14982        137 VICRQVEQNAPRLGIDLSKATVAVVGATG--DIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGK---IL---S  208 (340)
T ss_pred             HHHHHHHHhHHHhccCcCCCEEEEEccCh--HHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcccc---HH---h
Confidence            99998865         368999999999  999999999984 454 6666  88899999998865332   22   2


Q ss_pred             cc-c-CceeE--EEEcC----cCChhhhhcCCCCceeecccccCcc----CCCCCeeeecCCccccCCCCc-cc-ccccc
Q 011973          356 YA-A-HKTKI--WLVGD----DLTGKEQARAPKGTIFIPYTQIPPR----KLRKDCFYHSTPAMIIPPSLS-NM-HSCEN  421 (474)
Q Consensus       356 ~~-~-~~~~v--wivg~----~i~~~eq~~a~~G~~f~~~~~v~p~----~~R~dc~y~~~~am~vP~~~~-~~-~~~e~  421 (474)
                      +. . +.+++  ++.+.    .+++++.   +++.++||.+ +|+.    .-|+|+++.+++.+++|.+++ ++ ...|+
T Consensus       209 l~~~l~~aDiVv~~ts~~~~~~I~~~~l---~~~~~viDiA-vPRDVd~~v~~~~V~v~~gG~V~~p~~vd~~l~~~v~~  284 (340)
T PRK14982        209 LEEALPEADIVVWVASMPKGVEIDPETL---KKPCLMIDGG-YPKNLDTKVQGPGIHVLKGGIVEHSLDIDWKIMEIAEM  284 (340)
T ss_pred             HHHHHccCCEEEECCcCCcCCcCCHHHh---CCCeEEEEec-CCCCCCcccCCCCEEEEeCCccccCCCcCccHHHHHhc
Confidence            32 2 34444  44443    4888877   7999999999 5554    445999999999999999977 33 34679


Q ss_pred             ccCcchhHHHHHhhhhhhhcCCCCC-ccch--h-hhhHHHHHHHHHhCCCccCC
Q 011973          422 WLGRRVMSAWRIAGIIHALEGWDLN-ECGQ--T-MCDIHQVWHASLRHGFRPLF  471 (474)
Q Consensus       422 ~~prr~~~Ac~a~~~v~alEgw~~~-e~G~--i-v~~id~iw~aa~kHGF~p~~  471 (474)
                      ++|+|+++||+||+||++||||++| +|||  | ++||++|.++|+||||+|+-
T Consensus       285 ~~~~r~~~Ac~AEtiiL~leg~~~~fS~Gr~~i~~~~v~~i~~~a~kHGf~~~~  338 (340)
T PRK14982        285 DNPQRQMFACFAEAMLLEFEGCHTNFSWGRNQITLEKMEFIGEASVKHGFSPLL  338 (340)
T ss_pred             cchhhHHHHHHHHHHHHHhcCCccCCCcCccccCHHHHHHHHHHHHHcCCcccc
Confidence            9999999999999999999999999 5997  8 99999999999999999964

>COG3000 ERG3 Sterol desaturase [Lipid metabolism]

Probab=99.72  E-value=9.8e-18  Score=167.03  Aligned_cols=111  Identities=23%  Similarity=0.324  Sum_probs=97.8

Q ss_pred             cceeeccccCChHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhhccccceecccccccCCCceeeccCcc
Q 011973            3 NIYYFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPS   82 (474)
Q Consensus         3 ~~~~~Ts~~hhplE~li~~~l~~iPLl~~~~l~g~s~~~i~~y~l~~~~~~~~gHsNve~~P~~l~~~~p~Lkyli~TP~   82 (474)
                      +.+++||.+.||+|.++......+|++    +.|.++.++.++.++..+.+.++|||++. | +   .++++++++.||+
T Consensus       135 ~~~~~t~~~~hp~e~ll~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~H~~~~~-~-~---~~~~~~~v~~~p~  205 (271)
T COG3000         135 VPDPLTALRFHPLEILLLAFLGLLPLL----LLGLSPVAVALLFIFLLFWAVLIHSNLDL-P-L---PLGWLRYVFNTPR  205 (271)
T ss_pred             cCCchhhhhcChHHHHHHHHHHHHHHH----HhcCCHHHHHHHHHHHHHHHHHHhcCccc-c-C---CcccceeeecCch
Confidence            678899999999999999988888877    66799999999999999999999999997 4 1   3346677789999


Q ss_pred             hhhhhhhCC--CCCcccchhHHHHhcCCCCCCChhHHHHHhh
Q 011973           83 YHSLHHTQF--RTNYSLFMPIYDYIYGTIDRSSDSVYEKSLK  122 (474)
Q Consensus        83 ~H~lHHs~~--~~NYg~~f~lWDrLFGT~~~~~~~~~e~~~~  122 (474)
                      +|++||+++  |+|||.+|++|||+|||+.++.++.+++...
T Consensus       206 ~H~lHH~~~~~~~Nyg~~~~~WDrlFGT~~~~~~~~~~~~~~  247 (271)
T COG3000         206 HHRLHHSKDPYDKNYGVTLTFWDRLFGTYHPPDEREPDKIGV  247 (271)
T ss_pred             HHHHhccCCCCCCcchhhhHHHHHHcccCCCCcccCcccccc
Confidence            999999997  4999999999999999999998887777554

>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism]

Probab=99.44  E-value=1.1e-13  Score=138.03  Aligned_cols=98  Identities=21%  Similarity=0.221  Sum_probs=85.4

Q ss_pred             ceeeccccCChHHHHHHHHH-HHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhhccccceecccccccCCCceeeccCcc
Q 011973            4 IYYFPAVIHPFAEHIVYFLL-FAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPS   82 (474)
Q Consensus         4 ~~~~Ts~~hhplE~li~~~l-~~iPLl~~~~l~g~s~~~i~~y~l~~~~~~~~gHsNve~~P~~l~~~~p~Lkyli~TP~   82 (474)
                      +++++|.++||+|+++.++. +..|+    ++++ |+.+.++++++..+..+..||||++ |+.+.+.+|+    .++..
T Consensus       161 Pf~~sa~YaHp~E~~~lg~~~~~~p~----~~~~-H~~t~wiw~~l~i~~t~~~HsGY~f-Pwsl~~~~pf----y~ga~  230 (283)
T KOG0873|consen  161 PFGLSAEYAHPLEHLFLGLGTVMGPA----LLCG-HVITLWIWIALRILETVESHSGYDF-PWSLSKLIPF----YGGAE  230 (283)
T ss_pred             chhHhhhhcCHHHHHHcCChhhhhhH----Hhhh-HHHHHHHHHHHHHHHHhhccCCCCC-CccccccCcc----cCCCc
Confidence            67899999999999998654 33343    3544 9999999999999999999999998 9988887764    36899


Q ss_pred             hhhhhhhCCCCCcccchhHHHHhcCCCCC
Q 011973           83 YHSLHHTQFRTNYSLFMPIYDYIYGTIDR  111 (474)
Q Consensus        83 ~H~lHHs~~~~NYg~~f~lWDrLFGT~~~  111 (474)
                      +||+||..+.+||+..|.+|||++||...
T Consensus       231 ~HD~HH~~f~~n~~~~f~~~D~i~GTd~~  259 (283)
T KOG0873|consen  231 HHDYHHLVFIGNFASVFGYLDRIHGTDST  259 (283)
T ss_pred             ccchhhhhccccccchhHHHHHHhccCcc
Confidence            99999999999999999999999999864

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=99.39  E-value=2.5e-12  Score=120.87  Aligned_cols=166  Identities=14%  Similarity=0.081  Sum_probs=117.4

Q ss_pred             ecCChhHHHHHHhcCcC---------CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccc
Q 011973          280 VDGSSLAAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH  348 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~---------~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~  348 (474)
                      |+||++|||++++.+.+         ..++|+++|++|  .+|+++++.|+++|.+|.+  |+.++.+.+.+++....+.
T Consensus         1 ~~G~~~ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG--~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~   78 (194)
T cd01078           1 SNGSNTTAAAAVAAAGKALELMGKDLKGKTAVVLGGTG--PVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGE   78 (194)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHhCcCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence            68999999999988875         246999999999  9999999999999999988  8889999888876533222


Q ss_pred             ceeee--ccc---cc--CceeEEE----EcCcCChhhhhcCC-CCceeecccccCcc-----CCCCCeeeecCCccccCC
Q 011973          349 NLVLS--TSY---AA--HKTKIWL----VGDDLTGKEQARAP-KGTIFIPYTQIPPR-----KLRKDCFYHSTPAMIIPP  411 (474)
Q Consensus       349 ~l~~~--t~~---~~--~~~~vwi----vg~~i~~~eq~~a~-~G~~f~~~~~v~p~-----~~R~dc~y~~~~am~vP~  411 (474)
                      .+...  .+.   .+  +.++++|    .|.. .+.+..+.+ +|.+++|+...|+.     +.|+|.++.+++...-| 
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~diVi~at~~g~~-~~~~~~~~~~~~~vv~D~~~~~~~~~~~~~~~~~~~~~~g~~~~g~-  156 (194)
T cd01078          79 GVGAVETSDDAARAAAIKGADVVFAAGAAGVE-LLEKLAWAPKPLAVAADVNAVPPVGIEGIDVPDKGVDREGKVPYGA-  156 (194)
T ss_pred             cEEEeeCCCHHHHHHHHhcCCEEEECCCCCce-echhhhcccCceeEEEEccCCCCCCcccccccCCceecCCCeEEEe-
Confidence            22211  122   12  6677776    3332 122222333 48999999954443     56899999998733212 


Q ss_pred             CCccccccccccCcchhHHHHHhhhhhhhcCCCCCccchhhhhHHHHHHHHHhC
Q 011973          412 SLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRH  465 (474)
Q Consensus       412 ~~~~~~~~e~~~prr~~~Ac~a~~~v~alEgw~~~e~G~iv~~id~iw~aa~kH  465 (474)
                            ...+++|+.+.+||++|.|.  +|++..+        .++|-+.|+||
T Consensus       157 ------~~~~g~~~~~~~~~~ae~~~--~~~~~~~--------~~~~~~~~~~~  194 (194)
T cd01078         157 ------IGVGGLKMKTHRACIAKLFE--SNPLVLD--------AEEIYDLAKEM  194 (194)
T ss_pred             ------eccchhHHHHHHHHHHHHhh--cCCeeec--------hHHHHHHHhcC
Confidence                  13478999999999999998  4765543        55666666665

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism]

Probab=99.21  E-value=1.1e-12  Score=126.58  Aligned_cols=102  Identities=22%  Similarity=0.325  Sum_probs=84.1

Q ss_pred             ceeeccccCChHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhhccccceecccccccCCCceeeccCcch
Q 011973            4 IYYFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSY   83 (474)
Q Consensus         4 ~~~~Ts~~hhplE~li~~~l~~iPLl~~~~l~g~s~~~i~~y~l~~~~~~~~gHsNve~~P~~l~~~~p~Lkyli~TP~~   83 (474)
                      +|++.|.+.||+|-++...+.+.   .++++.|.|+-...++..+.++-.+..|||+-+ |...++.+     +-+...|
T Consensus       164 PYayGALyNhP~EGllLDT~G~g---la~l~sglspr~aiifFtfaTiKTVDDHCGy~l-P~dpfqm~-----F~NNa~Y  234 (287)
T KOG0874|consen  164 PYAYGALYNHPVEGLLLDTIGGG---LAFLLSGLSPRTAIIFFTFATIKTVDDHCGYWL-PGDPFQMF-----FPNNAAY  234 (287)
T ss_pred             chhhhhhhcCcchhhhhhhhchH---HHHHHcCCCccceEEEEEeeeeeeecccccccc-CCCceeEe-----ccCCchh
Confidence            68999999999999999876332   223477899988888889999999999999987 76444432     3388999


Q ss_pred             hhhhhhC--CCCCcc-cchhHHHHhcCCCCCCCh
Q 011973           84 HSLHHTQ--FRTNYS-LFMPIYDYIYGTIDRSSD  114 (474)
Q Consensus        84 H~lHHs~--~~~NYg-~~f~lWDrLFGT~~~~~~  114 (474)
                      ||+||+.  +++||+ .||++||+++||+.+.+-
T Consensus       235 HDiHHQ~yG~k~NFsQPFFtfWD~ilgTYmp~~~  268 (287)
T KOG0874|consen  235 HDIHHQLYGTKYNFSQPFFTFWDRILGTYMPYSL  268 (287)
T ss_pred             hhhhhhhhccccccCCcHHHHHHHHHhhcCCchh
Confidence            9999998  899999 689999999999987643

>KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism]

Probab=99.10  E-value=2.4e-11  Score=120.58  Aligned_cols=101  Identities=14%  Similarity=0.237  Sum_probs=82.6

Q ss_pred             eeccccCChHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhhccccceecccccccCCCceeeccCcchhh
Q 011973            6 YFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHS   85 (474)
Q Consensus         6 ~~Ts~~hhplE~li~~~l~~iPLl~~~~l~g~s~~~i~~y~l~~~~~~~~gHsNve~~P~~l~~~~p~Lkyli~TP~~H~   85 (474)
                      .++|...||++-+...+--.|-    .++.+.|..+.++...+..+++++.|.+.-.       .   +.+.+++|.+|.
T Consensus       171 pfAslafhpidg~lqaip~~I~----~Fi~Plh~~t~L~l~~f~~iwt~~IHd~~~~-------~---l~~~ingaahHt  236 (312)
T KOG0872|consen  171 PFASLAFHPIDGFLQAIPYHIY----PFIFPLHKVTYLSLFTFVNIWTISIHDGIYG-------S---LNPPINGAAHHT  236 (312)
T ss_pred             chhhhhcCcchhHhhhchhHhe----eeeecchHHHHHHHHHHHHhHheeeeccccc-------c---ccCccccccccc
Confidence            4678888888887776543332    3367889999999999999999999998654       2   334578999999


Q ss_pred             hhhhCCCCCcccchhHHHHhcCCCCCCChhHHHHH
Q 011973           86 LHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKS  120 (474)
Q Consensus        86 lHHs~~~~NYg~~f~lWDrLFGT~~~~~~~~~e~~  120 (474)
                      .||..+|.|||.+++||||+|||++.+..++++..
T Consensus       237 vHH~~f~~NYG~~tilwDrmfgSfr~p~~~~~d~~  271 (312)
T KOG0872|consen  237 VHHTYFDYNYGQYTILWDRMFGSFRAPDHEDFDIY  271 (312)
T ss_pred             eeeeeEecCCCcEEEeHHhccCcccCccccccchh
Confidence            99999999999999999999999999888766643

>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases

Probab=98.16  E-value=2.7e-06  Score=72.45  Aligned_cols=78  Identities=23%  Similarity=0.262  Sum_probs=62.1

Q ss_pred             cceeeccccCChHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhhccccceecccccccCCCceeeccCcc
Q 011973            3 NIYYFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPS   82 (474)
Q Consensus         3 ~~~~~Ts~~hhplE~li~~~l~~iPLl~~~~l~g~s~~~i~~y~l~~~~~~~~gHsNve~~P~~l~~~~p~Lkyli~TP~   82 (474)
                      |+.++++.+.+|+|.++..++..   +.+.++++.++.++.++.++..+.+.++|||+..      ...++++++..+|+
T Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~------~~~~~~~~~~~~~~  107 (114)
T PF04116_consen   37 NPTPLSAFRFHPLEALLLALLPL---LLPLLLLPFHALAFLLGIALFYLWYIFIHSGYHH------RFPPRLRYLFVTPR  107 (114)
T ss_pred             ccCchHHHHcChHHHHHHHHHHH---HHHHHHHhHhHHHHHHHHHHHHHHHHHhhcCccC------CCCCcchhHhcCHH
Confidence            46677889999999999876644   2223467899999999999999999999999922      12245677889999


Q ss_pred             hhhhhhh
Q 011973           83 YHSLHHT   89 (474)
Q Consensus        83 ~H~lHHs   89 (474)
                      +|++||+
T Consensus       108 ~H~~HH~  114 (114)
T PF04116_consen  108 HHDLHHS  114 (114)
T ss_pred             HHHhhCc
Confidence            9999996

Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways []. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.; GO: 0005506 iron ion binding, 0016491 oxidoreductase activity, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.46  E-value=0.00028  Score=63.42  Aligned_cols=92  Identities=21%  Similarity=0.241  Sum_probs=63.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE----Ec
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VG  367 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~-v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi----vg  367 (474)
                      ..++|+++||.   ..|++++.+|.+.|.+ +++  |+.+|.++|.++++... ...+..++..+  ..++++|    +|
T Consensus        11 ~~~~vlviGaG---g~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~-~~~~~~~~~~~~~~~~DivI~aT~~~   86 (135)
T PF01488_consen   11 KGKRVLVIGAG---GAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVN-IEAIPLEDLEEALQEADIVINATPSG   86 (135)
T ss_dssp             TTSEEEEESSS---HHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCS-EEEEEGGGHCHHHHTESEEEE-SSTT
T ss_pred             CCCEEEEECCH---HHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccc-cceeeHHHHHHHHhhCCeEEEecCCC
Confidence            57899999995   7999999999988988 777  99999999999983322 11121222222  6678877    44


Q ss_pred             -CcCChhhhhcCCCCc-eeecccccCcc
Q 011973          368 -DDLTGKEQARAPKGT-IFIPYTQIPPR  393 (474)
Q Consensus       368 -~~i~~~eq~~a~~G~-~f~~~~~v~p~  393 (474)
                       ..++++....+++.. +++|.+ +|+.
T Consensus        87 ~~~i~~~~~~~~~~~~~~v~Dla-~Pr~  113 (135)
T PF01488_consen   87 MPIITEEMLKKASKKLRLVIDLA-VPRD  113 (135)
T ss_dssp             STSSTHHHHTTTCHHCSEEEES--SS-S
T ss_pred             CcccCHHHHHHHHhhhhceeccc-cCCC
Confidence             356677775444444 899998 6665

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.31  E-value=0.00033  Score=69.78  Aligned_cols=46  Identities=26%  Similarity=0.321  Sum_probs=42.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  346 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~  346 (474)
                      +-|+++||++  -||.|+|+.|++.|.+|++  |+.|||++|+.+++.+.
T Consensus         7 kv~lITGASS--GiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~   54 (246)
T COG4221           7 KVALITGASS--GIGEATARALAEAGAKVVLAARREERLEALADEIGAGA   54 (246)
T ss_pred             cEEEEecCcc--hHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCc
Confidence            6789999996  9999999999999999999  99999999999998733

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.29  E-value=0.0003  Score=70.95  Aligned_cols=50  Identities=16%  Similarity=0.240  Sum_probs=45.7

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ  347 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~  347 (474)
                      ...+.++++||++  -||+++|+.|+++|..|+|  |++|||++|++++....+
T Consensus         4 ~~~~~~lITGASs--GIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~   55 (265)
T COG0300           4 MKGKTALITGASS--GIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTG   55 (265)
T ss_pred             CCCcEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhC
Confidence            3567899999997  9999999999999999999  999999999999887663

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.14  E-value=0.0014  Score=65.70  Aligned_cols=125  Identities=16%  Similarity=0.149  Sum_probs=77.9

Q ss_pred             ecCChhHHHHHH-hcCcCCCcEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeecc
Q 011973          280 VDGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS  355 (474)
Q Consensus       280 v~GnsltaAvvl-~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~  355 (474)
                      |||-...++..- .......++|+|+|+ |  -+|++++.+|.+.| .+|++  |+.++.+++++++.......+ . .+
T Consensus       104 TD~~G~~~~l~~~~~~~~~~k~vlVlGa-G--g~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~-~~  178 (278)
T PRK00258        104 TDGIGFVRALEERLGVDLKGKRILILGA-G--GAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D-LE  178 (278)
T ss_pred             ccHHHHHHHHHhccCCCCCCCEEEEEcC-c--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c-cc
Confidence            677776666642 123345678999998 6  89999999999999 67888  999999999888653211111 0 11


Q ss_pred             c-cc-CceeEEE----EcC----cCChhhhhcCCCCceeecccccCcc-CC----C-CCeeeecCCcccc
Q 011973          356 Y-AA-HKTKIWL----VGD----DLTGKEQARAPKGTIFIPYTQIPPR-KL----R-KDCFYHSTPAMII  409 (474)
Q Consensus       356 ~-~~-~~~~vwi----vg~----~i~~~eq~~a~~G~~f~~~~~v~p~-~~----R-~dc~y~~~~am~v  409 (474)
                      . +. ..++++|    +|-    ..+|-+..+.++++.++|++--|.. .+    | +-|.+..+..|-+
T Consensus       179 ~~~~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~~~G~~~~~G~~Ml~  248 (278)
T PRK00258        179 LQEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPTPFLAWAKAQGARTIDGLGMLV  248 (278)
T ss_pred             chhccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCCHHHHHHHHCcCeecCCHHHHH
Confidence            1 22 4567777    332    1223334456778888888733322 11    2 5666666666643

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.08  E-value=0.0018  Score=64.46  Aligned_cols=124  Identities=17%  Similarity=0.194  Sum_probs=79.1

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc
Q 011973          280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA  357 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~  357 (474)
                      |||-....+.--.......+.|+++|+ |  -+|+++|..|++.|.+|.+  |+.++.+++.+++....  ... ..+..
T Consensus        99 TD~~G~~~~l~~~~~~~~~k~vliiGa-G--g~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~--~~~-~~~~~  172 (270)
T TIGR00507        99 TDGIGLVSDLERLIPLRPNQRVLIIGA-G--GAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG--EIQ-AFSMD  172 (270)
T ss_pred             CCHHHHHHHHHhcCCCccCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC--ceE-Eechh
Confidence            677777666322122334578999999 5  7999999999999999888  88889999888864321  111 11221


Q ss_pred             --c-CceeEEE----Ec--CcCC--hhhhhcCCCCceeecccccCcc-----CCC-CCeeeecCCcccc
Q 011973          358 --A-HKTKIWL----VG--DDLT--GKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  409 (474)
Q Consensus       358 --~-~~~~vwi----vg--~~i~--~~eq~~a~~G~~f~~~~~v~p~-----~~R-~dc~y~~~~am~v  409 (474)
                        . ..++++|    +|  ..++  +-+....++|.+++|.+=.|++     +.| +.|.+..+..|-+
T Consensus       173 ~~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T~ll~~A~~~G~~~vdG~~Ml~  241 (270)
T TIGR00507       173 ELPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGETPFLAEAKSLGTKTIDGLGMLV  241 (270)
T ss_pred             hhcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCCHHHHHHHHCCCeeeCCHHHHH
Confidence              2 4567777    22  1111  1112345888899999865554     223 6788888777754

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=97.04  E-value=0.00055  Score=70.23  Aligned_cols=47  Identities=17%  Similarity=0.283  Sum_probs=42.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ  347 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~  347 (474)
                      .=.+|+|||.  .||++.|+-|||||.+|.|  |+++||+.+++|+.+...
T Consensus        50 ~WAVVTGaTD--GIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~   98 (312)
T KOG1014|consen   50 SWAVVTGATD--GIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK   98 (312)
T ss_pred             CEEEEECCCC--cchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC
Confidence            5567889998  9999999999999999999  999999999999877654

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.86  E-value=0.0022  Score=68.13  Aligned_cols=151  Identities=17%  Similarity=0.258  Sum_probs=95.7

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--Ec-
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VG-  367 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg-  367 (474)
                      ...++|+++|+ |  .+|+.++++|...|. +|++  |+.++.+.++++++..    .+...+.. . +.++++|  .| 
T Consensus       180 ~~~~~vlViGa-G--~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~----~~~~~~~~~~l~~aDvVI~aT~s  252 (423)
T PRK00045        180 LSGKKVLVIGA-G--EMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE----AIPLDELPEALAEADIVISSTGA  252 (423)
T ss_pred             ccCCEEEEECc-h--HHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc----EeeHHHHHHHhccCCEEEECCCC
Confidence            35679999998 6  999999999998897 6776  8888988898886532    12122222 2 5566766  22 


Q ss_pred             --CcCChhhhhcC-----CCCceeecccccCcc---CCC--CCeeeecCCccccCCCCccccc-cccccCcchhHHHHHh
Q 011973          368 --DDLTGKEQARA-----PKGTIFIPYTQIPPR---KLR--KDCFYHSTPAMIIPPSLSNMHS-CENWLGRRVMSAWRIA  434 (474)
Q Consensus       368 --~~i~~~eq~~a-----~~G~~f~~~~~v~p~---~~R--~dc~y~~~~am~vP~~~~~~~~-~e~~~prr~~~Ac~a~  434 (474)
                        -.+++++...+     .++.+++|.+ +|+.   ++.  +++.+.         +++.+.. ++.....|.-.+-.|+
T Consensus       253 ~~~~i~~~~l~~~~~~~~~~~~vviDla-~Prdid~~v~~l~~v~l~---------~vDdl~~~~~~n~~~r~~~~~~a~  322 (423)
T PRK00045        253 PHPIIGKGMVERALKARRHRPLLLVDLA-VPRDIEPEVGELPGVYLY---------DVDDLQEIVEENLAQRQEAAEKAE  322 (423)
T ss_pred             CCcEEcHHHHHHHHhhccCCCeEEEEeC-CCCCCcccccccCCeEEE---------EHHHHHHHHHhhHHHHHHHHHHHH
Confidence              24556655443     3567899998 6654   121  233211         1222222 4456667888889999


Q ss_pred             hhhh----hhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 011973          435 GIIH----ALEGWDLN-ECGQ-T--M-CDIHQVWHASL  463 (474)
Q Consensus       435 ~~v~----alEgw~~~-e~G~-i--v-~~id~iw~aa~  463 (474)
                      .||-    .|+.|... .... |  + +++++|-+.-+
T Consensus       323 ~ii~~~~~~f~~~~~~~~~~p~I~~lr~~~~~i~~~el  360 (423)
T PRK00045        323 AIVEEEVAEFMEWLRSLEVVPTIRALREQAEEIREEEL  360 (423)
T ss_pred             HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence            9986    67788655 6666 5  4 66666655443

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.80  E-value=0.01  Score=60.97  Aligned_cols=140  Identities=15%  Similarity=0.120  Sum_probs=87.8

Q ss_pred             cCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhHH
Q 011973          244 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  314 (474)
Q Consensus       244 ~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig~  314 (474)
                      .|+|+++-=-=|....+-.--++.+.-.|+ +.-+-+.||+.+|+       |++.+-+ +++.++|.++|+-   .+|+
T Consensus        64 ~g~K~~~~~p~n~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaa~sala~~~la~~~~~~v~iiGaG---~~a~  140 (325)
T PRK08618         64 LGLKIVSVVPENKKKGKPTIPGTVILSDFETGEVLAILDGTYLTQIRTGALSGVATKYLAREDAKTLCLIGTG---GQAK  140 (325)
T ss_pred             EEEEEEeecCCCcccCCCcceEEEEEEeCCCCceEEEEccchhhhhhHHHHHHHHHHHhcCCCCcEEEEECCc---HHHH
Confidence            588887753223211222111234444444 45589999999985       3334555 5678899999998   6999


Q ss_pred             HHHHHHh-ccCc-EEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEcCcCC-hh-hhhcCCCCceeec
Q 011973          315 AVASSLC-QMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGDDLT-GK-EQARAPKGTIFIP  386 (474)
Q Consensus       315 ava~~L~-~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg~~i~-~~-eq~~a~~G~~f~~  386 (474)
                      +.+.+|+ .+++ +|.+  |++++.+++.+++..+.+..+....+++ . ++++++|....-. |. + .+.++|++++.
T Consensus       141 ~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~p~i~-~~l~~G~hV~~  219 (325)
T PRK08618        141 GQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKTPVFS-EKLKKGVHINA  219 (325)
T ss_pred             HHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCCcchH-HhcCCCcEEEe
Confidence            9999887 4454 4444  9999999998876544333322233444 3 7788877433222 21 2 57799999987


Q ss_pred             c
Q 011973          387 Y  387 (474)
Q Consensus       387 ~  387 (474)
                      +
T Consensus       220 i  220 (325)
T PRK08618        220 V  220 (325)
T ss_pred             c
Confidence            7

>PLN00203 glutamyl-tRNA reductase

Probab=96.79  E-value=0.0049  Score=67.63  Aligned_cols=209  Identities=14%  Similarity=0.200  Sum_probs=123.2

Q ss_pred             HHHHHHHHHHHHcCCcEEEec-cccc-cccccccCceeeecCCCCcceeeecCChhHHHHHHhc----CcC---CCcEEE
Q 011973          232 SLIEEAILEADAKGVKVISLG-LLNQ-GEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNS----LPK---TTAHVL  302 (474)
Q Consensus       232 ~~Ie~Ai~~A~k~G~kV~~LG-~ln~-~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~~----ip~---~~~~V~  302 (474)
                      .+|-+|...|++.|.-    | .||. ++.     .+.+.|.-. =+..+-.|..=.+.++++-    .+.   ..++|+
T Consensus       201 gQVK~A~~~A~~~g~~----g~~L~~LF~~-----Ai~~~KrVR-teT~I~~~~vSv~s~Av~la~~~~~~~~l~~kkVl  270 (519)
T PLN00203        201 AQVKQVVKVGQGVDGF----GRNLSGLFKH-----AITAGKRVR-TETNIASGAVSVSSAAVELALMKLPESSHASARVL  270 (519)
T ss_pred             HHHHHHHHHHHHcCCc----cHHHHHHHHH-----HHHHHHHHh-hccCCCCCCcCHHHHHHHHHHHhcCCCCCCCCEEE
Confidence            4578888899888752    3 2222 111     223333322 1234444443333333332    232   368999


Q ss_pred             EeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE----cC-cCCh
Q 011973          303 LRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV----GD-DLTG  372 (474)
Q Consensus       303 l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv----g~-~i~~  372 (474)
                      |+|+ |  .+|+++++.|..+|. +|++  |+.++.+.|+++++. .........+.. . ..++++|.    ++ .+++
T Consensus       271 VIGA-G--~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g-~~i~~~~~~dl~~al~~aDVVIsAT~s~~pvI~~  346 (519)
T PLN00203        271 VIGA-G--KMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPD-VEIIYKPLDEMLACAAEADVVFTSTSSETPLFLK  346 (519)
T ss_pred             EEeC-H--HHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCC-CceEeecHhhHHHHHhcCCEEEEccCCCCCeeCH
Confidence            9999 6  999999999998886 5777  999999999988752 111111111222 2 66777662    22 5777


Q ss_pred             hhhhcCCC-------CceeecccccCcc-C--CC--CCeeeecCCccccCCCCccccccccccCcchhHHHHHhhhhh--
Q 011973          373 KEQARAPK-------GTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH--  438 (474)
Q Consensus       373 ~eq~~a~~-------G~~f~~~~~v~p~-~--~R--~dc~y~~~~am~vP~~~~~~~~~e~~~prr~~~Ac~a~~~v~--  438 (474)
                      +..+.+++       ..+|+|.+ +|+. +  +.  +++.+..      -+|++.  .++-.+..|.-.+=.|+.||-  
T Consensus       347 e~l~~~~~~~~~~~~~~~~IDLA-vPRdIdp~v~~l~~v~lyd------iDdL~~--i~~~n~~~R~~~~~~Ae~II~ee  417 (519)
T PLN00203        347 EHVEALPPASDTVGGKRLFVDIS-VPRNVGACVSELESARVYN------VDDLKE--VVAANKEDRLRKAMEAQTIIREE  417 (519)
T ss_pred             HHHHHhhhcccccCCCeEEEEeC-CCCCCccccccCCCCeEEE------eccHHH--HHHHhHHHHHHHHHHHHHHHHHH
Confidence            77777654       25899999 8875 2  21  2222111      112332  245566777767777888775  


Q ss_pred             --hhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 011973          439 --ALEGWDLN-ECGQ-T--M-CDIHQVWHASL  463 (474)
Q Consensus       439 --alEgw~~~-e~G~-i--v-~~id~iw~aa~  463 (474)
                        .|+.|... +... |  + ++.+.|-+.-+
T Consensus       418 ~~~F~~w~~~~~~~p~I~~lr~~~~~i~~~El  449 (519)
T PLN00203        418 SKNFEAWRDSLETVPTIKKLRSYAERIRAAEL  449 (519)
T ss_pred             HHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence              78888766 6777 5  4 67766655443

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.67  E-value=0.0043  Score=56.61  Aligned_cols=35  Identities=26%  Similarity=0.307  Sum_probs=32.2

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHH
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  337 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~  337 (474)
                      |+|.||||  .+|+.+++.|.++|.+|..  |++++.++
T Consensus         1 I~V~GatG--~vG~~l~~~L~~~~~~V~~~~R~~~~~~~   37 (183)
T PF13460_consen    1 ILVFGATG--FVGRALAKQLLRRGHEVTALVRSPSKAED   37 (183)
T ss_dssp             EEEETTTS--HHHHHHHHHHHHTTSEEEEEESSGGGHHH
T ss_pred             eEEECCCC--hHHHHHHHHHHHCCCEEEEEecCchhccc
Confidence            78999999  9999999999999999999  88887766

...

>PRK09186 flagellin modification protein A; Provisional

Probab=96.62  E-value=0.0046  Score=59.12  Aligned_cols=44  Identities=18%  Similarity=0.249  Sum_probs=38.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         4 ~k~vlItGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~   49 (256)
T PRK09186          4 GKTILITGAGG--LIGSALVKAILEAGGIVIAADIDKEALNELLESLG   49 (256)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  88888888777654

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.50  E-value=0.011  Score=52.99  Aligned_cols=123  Identities=15%  Similarity=0.137  Sum_probs=72.4

Q ss_pred             cCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeecccc
Q 011973          281 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA  357 (474)
Q Consensus       281 ~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~  357 (474)
                      ||-.+..|.--..+....++|.++|+ |  .+|+++++.|++.| .+|.+  |+.++.+++.+++.... .. ...++.+
T Consensus         2 d~~g~~~a~~~~~~~~~~~~i~iiG~-G--~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~   76 (155)
T cd01065           2 DGLGFVRALEEAGIELKGKKVLILGA-G--GAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IA-IAYLDLE   76 (155)
T ss_pred             CHHHHHHHHHhhCCCCCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cc-eeecchh
Confidence            44444444443344455688999998 7  89999999999885 67777  88888888887754321 00 1122222


Q ss_pred             -c-CceeEEEE--cCcC---Chh--hhhcCCCCceeecccccCcc-----CCC-CCeeeecCCccc
Q 011973          358 -A-HKTKIWLV--GDDL---TGK--EQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMI  408 (474)
Q Consensus       358 -~-~~~~vwiv--g~~i---~~~--eq~~a~~G~~f~~~~~v~p~-----~~R-~dc~y~~~~am~  408 (474)
                       . .+++++|.  ....   ++.  ....+++|++++|.+-+|+.     ..| ..+.+..+..|-
T Consensus        77 ~~~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~~l~~~~~~~g~~~v~g~~~~  142 (155)
T cd01065          77 ELLAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLETPLLKEARALGAKTIDGLEML  142 (155)
T ss_pred             hccccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCCHHHHHHHHCCCceeCCHHHH
Confidence             2 56667662  1111   110  11235788888888766552     223 456565555553

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.48  E-value=0.0071  Score=61.63  Aligned_cols=171  Identities=21%  Similarity=0.246  Sum_probs=104.3

Q ss_pred             HHHHHHHHcCCcEEEecccccccccccc--CceeeecCCCCcceeeecCChhHHHHHHhcCcCC--CcEEEEeccCCCch
Q 011973          236 EAILEADAKGVKVISLGLLNQGEELNRN--GEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKT--TAHVLLRGTVTANK  311 (474)
Q Consensus       236 ~Ai~~A~k~G~kV~~LG~ln~~e~ln~~--g~l~v~k~p~~L~irvv~GnsltaAvvl~~ip~~--~~~V~l~Gatg~~k  311 (474)
                      +|+..+|+.--.--..|+-|-   +...  |. .+-=|        |||-.+.-+-.-..++..  .++|++.||-|   
T Consensus        72 ~~~~~lD~l~~~A~~iGAVNT---l~~~~~g~-l~G~N--------TD~~G~~~~L~~~~~~~~~~~~~vlilGAGG---  136 (283)
T COG0169          72 AALPLLDELSPRARLIGAVNT---LVREDDGK-LRGYN--------TDGIGFLRALKEFGLPVDVTGKRVLILGAGG---  136 (283)
T ss_pred             HHHHHHhcCCHHHHHhCCceE---EEEccCCE-EEEEc--------CCHHHHHHHHHhcCCCcccCCCEEEEECCcH---
Confidence            444445554444445566676   4333  33 23333        677777766665565554  48999999998   


Q ss_pred             hHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecc---cccC-ceeEEE----EcCcCCh----hhhh
Q 011973          312 VANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS---YAAH-KTKIWL----VGDDLTG----KEQA  376 (474)
Q Consensus       312 ig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~---~~~~-~~~vwi----vg~~i~~----~eq~  376 (474)
                      -++||+..|.+.|+ ++++  |+.+|.++|++..++... . ++...   .+.. +.+++|    +|-.-.+    -+-.
T Consensus       137 AarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-~-~~~~~~~~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~  214 (283)
T COG0169         137 AARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-A-VEAAALADLEGLEEADLLINATPVGMAGPEGDSPVPAE  214 (283)
T ss_pred             HHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-c-cccccccccccccccCEEEECCCCCCCCCCCCCCCcHH
Confidence            68999999999995 5777  999999999998765432 1 11112   2222 467777    2221111    0012


Q ss_pred             cCCCCceeecccccCcc-----CCC-CCeeeecCCccccCCCCccccccccccCcc
Q 011973          377 RAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMIIPPSLSNMHSCENWLGRR  426 (474)
Q Consensus       377 ~a~~G~~f~~~~~v~p~-----~~R-~dc~y~~~~am~vP~~~~~~~~~e~~~prr  426 (474)
                      -.++++++.|+.=.|.+     ..| +=|.+.++..|-+-   |+..+++.|.+.+
T Consensus       215 ~l~~~~~v~D~vY~P~~TplL~~A~~~G~~~idGl~Mlv~---Qaa~aF~lwtg~~  267 (283)
T COG0169         215 LLPKGAIVYDVVYNPLETPLLREARAQGAKTIDGLGMLVH---QAAEAFELWTGVE  267 (283)
T ss_pred             hcCcCCEEEEeccCCCCCHHHHHHHHcCCeEECcHHHHHH---HHHHHHHHHhCCC
Confidence            34888889888855544     223 56778888777664   4455555665443

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.40  E-value=0.0084  Score=56.53  Aligned_cols=85  Identities=15%  Similarity=0.142  Sum_probs=56.5

Q ss_pred             hhHHHHHHhcCcC--CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccC
Q 011973          284 SLAAAVVVNSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH  359 (474)
Q Consensus       284 sltaAvvl~~ip~--~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~  359 (474)
                      .+++.-.++++..  ..++|+|+|+..  -+|..+|.+|.++|.+|++  |+.+   ++++.+                +
T Consensus        28 ~~a~v~l~~~~~~~l~gk~vlViG~G~--~~G~~~a~~L~~~g~~V~v~~r~~~---~l~~~l----------------~   86 (168)
T cd01080          28 PAGILELLKRYGIDLAGKKVVVVGRSN--IVGKPLAALLLNRNATVTVCHSKTK---NLKEHT----------------K   86 (168)
T ss_pred             HHHHHHHHHHcCCCCCCCEEEEECCcH--HHHHHHHHHHhhCCCEEEEEECCch---hHHHHH----------------h
Confidence            4455555555643  689999999963  3699999999999999888  4432   222221                1


Q ss_pred             ceeEEE----EcCcCChhhhhcCCCCceeecccccCcc
Q 011973          360 KTKIWL----VGDDLTGKEQARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       360 ~~~vwi----vg~~i~~~eq~~a~~G~~f~~~~~v~p~  393 (474)
                      .++++|    ..+.+++++.   ++|++++|++ +|+.
T Consensus        87 ~aDiVIsat~~~~ii~~~~~---~~~~viIDla-~prd  120 (168)
T cd01080          87 QADIVIVAVGKPGLVKGDMV---KPGAVVIDVG-INRV  120 (168)
T ss_pred             hCCEEEEcCCCCceecHHHc---cCCeEEEEcc-CCCc
Confidence            334444    1124666654   7899999999 7774

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.36  E-value=0.011  Score=59.88  Aligned_cols=127  Identities=15%  Similarity=0.102  Sum_probs=74.3

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCcccccc-ceeeecc
Q 011973          280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQH-NLVLSTS  355 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~-~l~~~t~  355 (474)
                      |||-....+.--.......++|++.|+-|   .|+|+|..|++.|+ ++++  |+.++.+.|.+++...... .+....+
T Consensus       109 TD~~G~~~~l~~~~~~~~~k~vlIlGaGG---aaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~  185 (284)
T PRK12549        109 TDWSGFAESFRRGLPDASLERVVQLGAGG---AGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSD  185 (284)
T ss_pred             CCHHHHHHHHHhhccCccCCEEEEECCcH---HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccc
Confidence            56665555543211223457899999985   99999999999998 6777  8999999998876443211 1111112


Q ss_pred             cc-c-CceeEEE----EcCcC---ChhhhhcCCCCceeecccccCcc-----CCC-CCeeeecCCcccc
Q 011973          356 YA-A-HKTKIWL----VGDDL---TGKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  409 (474)
Q Consensus       356 ~~-~-~~~~vwi----vg~~i---~~~eq~~a~~G~~f~~~~~v~p~-----~~R-~dc~y~~~~am~v  409 (474)
                      .. . ++++++|    +|-.-   .|-+..+.+++..+.|++--|+.     .-| +-|....+..|-+
T Consensus       186 ~~~~~~~aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~~~G~~~~~G~~ML~  254 (284)
T PRK12549        186 LAAALAAADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLETELLRAARALGCRTLDGGGMAV  254 (284)
T ss_pred             hHhhhCCCCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCCCCHHHHHHHHCCCeEecCHHHHH
Confidence            22 2 5677777    33110   11122345677777777733322     112 4566666666644

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.32  E-value=0.025  Score=57.50  Aligned_cols=125  Identities=16%  Similarity=0.167  Sum_probs=77.4

Q ss_pred             HHHHcCCcEEEeccccccccccccCceeeecCCCCcceeeecCChhHHHHHHhcCc--CCCcEEEEeccCCCchhHHHHH
Q 011973          240 EADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVA  317 (474)
Q Consensus       240 ~A~k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~~ip--~~~~~V~l~Gatg~~kig~ava  317 (474)
                      .|+++|++|+.+-..+.   +.       ..|.    +.+   -..+.+.+++..+  -..++|.++|. |  .+|+++|
T Consensus       108 ~a~~~gi~v~~~~~~~~---va-------~~n~----~~~---Ae~ai~~al~~~~~~l~gk~v~IiG~-G--~iG~avA  167 (287)
T TIGR02853       108 LAADAGVKLIELFERDD---VA-------IYNS----IPT---AEGAIMMAIEHTDFTIHGSNVMVLGF-G--RTGMTIA  167 (287)
T ss_pred             HHHHCCCeEEEEEeccc---eE-------EEcc----HhH---HHHHHHHHHHhcCCCCCCCEEEEEcC-h--HHHHHHH
Confidence            67888999887766332   21       1110    111   1223344454433  24679999999 4  8999999


Q ss_pred             HHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc---CcCChhhhhcCCCCceeecccc
Q 011973          318 SSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG---DDLTGKEQARAPKGTIFIPYTQ  389 (474)
Q Consensus       318 ~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg---~~i~~~eq~~a~~G~~f~~~~~  389 (474)
                      +.|...|.+|++  |+.++.+.+++. ..    ..+...++++  ++++++|.-   ..++.+...++++|++++|.+-
T Consensus       168 ~~L~~~G~~V~v~~R~~~~~~~~~~~-g~----~~~~~~~l~~~l~~aDiVint~P~~ii~~~~l~~~k~~aliIDlas  241 (287)
T TIGR02853       168 RTFSALGARVFVGARSSADLARITEM-GL----IPFPLNKLEEKVAEIDIVINTIPALVLTADVLSKLPKHAVIIDLAS  241 (287)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHC-CC----eeecHHHHHHHhccCCEEEECCChHHhCHHHHhcCCCCeEEEEeCc
Confidence            999999999998  777766655432 11    1111112222  566776632   2356777888999999999993

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.24  E-value=0.014  Score=64.71  Aligned_cols=59  Identities=19%  Similarity=0.363  Sum_probs=49.1

Q ss_pred             CChhHHHHHHhcCcC-----CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          282 GSSLAAAVVVNSLPK-----TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       282 GnsltaAvvl~~ip~-----~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      |.+.....+.+.+|+     +.+.|+|+||+|  .||+++++.|+++|.+|.+  |+.++.+.+.+++
T Consensus        59 ~~~~~~~~~~~~~~~~~~~~~gKvVLVTGATG--gIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l  124 (576)
T PLN03209         59 GATKFSSAAIEAIPKELDTKDEDLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSV  124 (576)
T ss_pred             cchhhhhhhhhccccccccCCCCEEEEECCCC--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Confidence            566666777788875     356899999999  9999999999999999987  8989888776654

>PRK06407 ornithine cyclodeaminase; Provisional

Probab=96.17  E-value=0.036  Score=56.71  Aligned_cols=132  Identities=13%  Similarity=0.045  Sum_probs=88.8

Q ss_pred             cCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcCcCCCcEEEEeccCCCchhHHH
Q 011973          244 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSLPKTTAHVLLRGTVTANKVANA  315 (474)
Q Consensus       244 ~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~ip~~~~~V~l~Gatg~~kig~a  315 (474)
                      .|+|+++-+   .    |+-.++.+.-+|+ +.-..+.||+.+|+       |+..+-..++.+.+.++|+-   ..|+.
T Consensus        62 ~g~K~~~~~---~----~~~~g~v~L~d~~TG~p~Almd~~~lT~~RTaA~salaa~~l~~da~~l~iiGaG---~QA~~  131 (301)
T PRK06407         62 AGLKTYIAG---R----NGARFVVLLFDVNNPELVAIFEANRLGQIRTGAVTAYATSILHKNVENFTIIGSG---FQAET  131 (301)
T ss_pred             eEEEEEecC---C----CCccEEEEEEECCCCCEEEEEccchHHHHHHHHHHHHHHHHhhcCCcEEEEECCc---HHHHH
Confidence            577876642   1    1222334444444 34489999999986       45556567788999999987   89999


Q ss_pred             HHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE----EcCc-CChhhhhcCCCCcee
Q 011973          316 VASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL----VGDD-LTGKEQARAPKGTIF  384 (474)
Q Consensus       316 va~~L~--~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi----vg~~-i~~~eq~~a~~G~~f  384 (474)
                      -++++|  +.-.+|.+  |++++.+.+.+++....+..+.-+.+.+ + ++++|++    ..+. ++.+   |.+||+|+
T Consensus       132 ~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~P~~~~~---~l~pg~hV  208 (301)
T PRK06407        132 QLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDTPIFNRK---YLGDEYHV  208 (301)
T ss_pred             HHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCcEecHH---HcCCCceE
Confidence            999999  55556666  9999999999887754443423334554 3 7888877    2222 3344   44789998


Q ss_pred             eccc
Q 011973          385 IPYT  388 (474)
Q Consensus       385 ~~~~  388 (474)
                      ..+-
T Consensus       209 ~aiG  212 (301)
T PRK06407        209 NLAG  212 (301)
T ss_pred             EecC
Confidence            8873

>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []

Probab=96.16  E-value=0.031  Score=57.31  Aligned_cols=140  Identities=19%  Similarity=0.107  Sum_probs=85.0

Q ss_pred             HcCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhH
Q 011973          243 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  313 (474)
Q Consensus       243 k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig  313 (474)
                      -.|+|+++.--=|....+..--++.+.-+|. +.-+-+.||+.+|+       |++.+-+ |++...+.++|+-   ..|
T Consensus        64 ~~gvK~v~~~p~N~~~glP~~~g~i~L~D~~TG~p~ai~dg~~lT~~RTaA~sala~~~La~~~~~~l~viGaG---~QA  140 (313)
T PF02423_consen   64 VAGVKWVSVFPGNPKRGLPSIQGVILLFDPETGEPLAIMDGTWLTALRTAAVSALAARYLARPDARTLGVIGAG---VQA  140 (313)
T ss_dssp             EEEEEEEEEETTCGGGTSSSEEEEEEEEETTT--EEEEEESHHHHHHHHHHHHHHHHHHHS-TT--EEEEE--S---HHH
T ss_pred             EEEEEEEEecCCccccCCCceeEEEEEEECCCCCEEEEecccchhhhHHHHHHHHHHHHhCcCCCceEEEECCC---HHH
Confidence            4688888854444433343333444444443 34488999999984       3333333 6678899999987   899


Q ss_pred             HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE----cC---cCChhhhhcCCC
Q 011973          314 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV----GD---DLTGKEQARAPK  380 (474)
Q Consensus       314 ~ava~~L~--~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv----g~---~i~~~eq~~a~~  380 (474)
                      +.-+++|+  +.-.+|.+  |++++.+++.+++.. .+..+..+.+.+ + ++++|++.    .+   .++.+   |.++
T Consensus       141 ~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~-~~~~v~~~~~~~~av~~aDii~taT~s~~~~P~~~~~---~l~~  216 (313)
T PF02423_consen  141 RWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRD-LGVPVVAVDSAEEAVRGADIIVTATPSTTPAPVFDAE---WLKP  216 (313)
T ss_dssp             HHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHC-CCTCEEEESSHHHHHTTSSEEEE----SSEEESB-GG---GS-T
T ss_pred             HHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcc-ccccceeccchhhhcccCCEEEEccCCCCCCccccHH---HcCC
Confidence            99999998  55445555  999999999999777 455544455554 4 88888772    22   34444   5599


Q ss_pred             Cceeecccc
Q 011973          381 GTIFIPYTQ  389 (474)
Q Consensus       381 G~~f~~~~~  389 (474)
                      |+|+..+.-
T Consensus       217 g~hi~~iGs  225 (313)
T PF02423_consen  217 GTHINAIGS  225 (313)
T ss_dssp             T-EEEE-S-
T ss_pred             CcEEEEecC
Confidence            999988875

The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=96.16  E-value=0.059  Score=55.55  Aligned_cols=140  Identities=18%  Similarity=0.159  Sum_probs=90.6

Q ss_pred             HcCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhH
Q 011973          243 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  313 (474)
Q Consensus       243 k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig  313 (474)
                      -.|+|+++.--=|....|-.-.++.+.-+|. +.-+-+.||+.+|+       |++.+-+ +++.++|.++|+-   ..|
T Consensus        64 ~~g~K~v~~~p~N~~~glp~~~g~i~L~d~~tG~p~ai~d~~~lT~~RTaA~salaa~~La~~~~~~lgiiG~G---~qA  140 (325)
T TIGR02371        64 MAGVKCVNVHPGNPDRHLPTVMALIILVSPETGFPIALMDGTYITDMRTGAAGGVAAKYLARKDSSVLGIIGAG---RQA  140 (325)
T ss_pred             eEEEEEEeecCCchhcCCCcceEEEEEeeCCCCCeEEEEeCcchhhHHHHHHHHHHHHHhCCCCCCEEEEECCC---HHH
Confidence            4788988863333323333334445555555 45589999999985       2333545 5678899999986   899


Q ss_pred             HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE-c---Cc-CChhhhhcCCCCc
Q 011973          314 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV-G---DD-LTGKEQARAPKGT  382 (474)
Q Consensus       314 ~ava~~L~--~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv-g---~~-i~~~eq~~a~~G~  382 (474)
                      ++-+++|+  +...+|.+  |++++.+.+.+++.+ .+.....+++.+ + ++++|++. -   +. ++++   |.+||+
T Consensus       141 ~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~-~g~~v~~~~~~~eav~~aDiVitaT~s~~P~~~~~---~l~~g~  216 (325)
T TIGR02371       141 WTQLEALSRVFDLEEVSVYCRTPSTREKFALRASD-YEVPVRAATDPREAVEGCDILVTTTPSRKPVVKAD---WVSEGT  216 (325)
T ss_pred             HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHh-hCCcEEEeCCHHHHhccCCEEEEecCCCCcEecHH---HcCCCC
Confidence            99888877  66667777  999999999887652 222222233454 3 77877662 1   22 2333   459999


Q ss_pred             eeecccc
Q 011973          383 IFIPYTQ  389 (474)
Q Consensus       383 ~f~~~~~  389 (474)
                      +++.+..
T Consensus       217 ~v~~vGs  223 (325)
T TIGR02371       217 HINAIGA  223 (325)
T ss_pred             EEEecCC
Confidence            9998863

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.15  E-value=0.008  Score=64.15  Aligned_cols=210  Identities=12%  Similarity=0.103  Sum_probs=121.5

Q ss_pred             HHHHHHHHHHHHHHcCCcEEEeccccccccccccCceeeecCCCCcceeeecCChhHHHHHHhcCcC-----CCcEEEEe
Q 011973          230 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAHVLLR  304 (474)
Q Consensus       230 in~~Ie~Ai~~A~k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~~ip~-----~~~~V~l~  304 (474)
                      |=.+|-+|...|.+.|.-=--|..+=+ .      .+.+.|.-. =+.++-.|..=.+.++++-..+     ..++|+|+
T Consensus       116 IlgQVK~A~~~A~~~g~~g~~L~~lf~-~------A~~~aKrVr-teT~I~~~~vSv~~~Av~la~~~~~~l~~kkvlvi  187 (414)
T PRK13940        116 ILGQVKDSYTLSKKNHAIGKELDRVFQ-K------VFATAKRVR-SETRIGHCPVSVAFSAITLAKRQLDNISSKNVLII  187 (414)
T ss_pred             HHHHHHHHHHHHHHcCCchHHHHHHHH-H------HHHHHHHHH-hccCCCCCCcCHHHHHHHHHHHHhcCccCCEEEEE
Confidence            445588999999998863222211111 1      223334422 2355555655455555554433     45789999


Q ss_pred             ccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEcC-----cCChhh
Q 011973          305 GTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGD-----DLTGKE  374 (474)
Q Consensus       305 Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg~-----~i~~~e  374 (474)
                      |+ |  .+|+++|.+|+..|+ ++++  |+.++-++|.++++...   ......+. . ..++++|...     .|+.++
T Consensus       188 Ga-G--~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~---~~~~~~l~~~l~~aDiVI~aT~a~~~vi~~~~  261 (414)
T PRK13940        188 GA-G--QTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNAS---AHYLSELPQLIKKADIIIAAVNVLEYIVTCKY  261 (414)
T ss_pred             cC-c--HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCe---EecHHHHHHHhccCCEEEECcCCCCeeECHHH
Confidence            99 5  899999999999986 4666  88899999998875321   12111222 2 6677777222     245544


Q ss_pred             hhcCCCCceeecccccCcc-C--CC--CCeeeecCCccccCCCCccccccccccCcchhHHHHHhhhhh----hhcCCCC
Q 011973          375 QARAPKGTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH----ALEGWDL  445 (474)
Q Consensus       375 q~~a~~G~~f~~~~~v~p~-~--~R--~dc~y~~~~am~vP~~~~~~~~~e~~~prr~~~Ac~a~~~v~----alEgw~~  445 (474)
                      ..  .+..+++|.+ +|+. +  +.  +++.+..--      +++.  .++-.+..|...+=.|+.||-    .|+.|..
T Consensus       262 ~~--~~~~~~iDLa-vPRdidp~v~~l~~v~l~~iD------dl~~--i~~~n~~~R~~~~~~a~~iI~e~~~~f~~w~~  330 (414)
T PRK13940        262 VG--DKPRVFIDIS-IPQALDPKLGELEQNVYYCVD------DINA--VIEDNKDKRKYESSKAQKIIVKSLEEYLEKEK  330 (414)
T ss_pred             hC--CCCeEEEEeC-CCCCCCccccCcCCeEEEeHH------HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            32  3457999999 7766 2  21  233222111      1111  133345566666667777765    6777865


Q ss_pred             C-ccch-h--h-hhHHHHHHHHHh
Q 011973          446 N-ECGQ-T--M-CDIHQVWHASLR  464 (474)
Q Consensus       446 ~-e~G~-i--v-~~id~iw~aa~k  464 (474)
                      . .+.. |  + ++.++|-+..++
T Consensus       331 ~~~~~p~I~~lr~~~~~i~~~el~  354 (414)
T PRK13940        331 AIISNSAIKELFQKADGLVDLSLE  354 (414)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHH
Confidence            5 5666 5  4 777777554443

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.07  E-value=0.02  Score=58.00  Aligned_cols=62  Identities=16%  Similarity=0.190  Sum_probs=44.2

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcE-EEe--cch---hhHHHHHhhCcc
Q 011973          280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICK---DDYEKLKLRIPV  344 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~-v~l--~~~---~~~~~l~~~~~~  344 (474)
                      |||.-...+.--.......+.|+++|| |  -+|+|+|..|.+.|.+ |.+  |+.   ++.+++.+++..
T Consensus       108 TD~~G~~~~l~~~~~~~~~k~vlI~GA-G--GagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~  175 (289)
T PRK12548        108 TDGLGFVRNLREHGVDVKGKKLTVIGA-G--GAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQ  175 (289)
T ss_pred             cCHHHHHHHHHhcCCCcCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhh
Confidence            556555554432233334578999999 4  6999999999999987 877  775   678887777643

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.07  E-value=0.018  Score=58.03  Aligned_cols=61  Identities=16%  Similarity=0.102  Sum_probs=43.3

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccCceeEEEEcCcCChhhhhc
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQAR  377 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~~vwivg~~i~~~eq~~  377 (474)
                      +|+|+||||  -||+.+++.|.++|.+|..  |+.++...++..                  . ..|+.||..+++++..
T Consensus         2 kIlVtGatG--~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~------------------~-v~~v~~Dl~d~~~l~~   60 (317)
T CHL00194          2 SLLVIGATG--TLGRQIVRQALDEGYQVRCLVRNLRKASFLKEW------------------G-AELVYGDLSLPETLPP   60 (317)
T ss_pred             EEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhc------------------C-CEEEECCCCCHHHHHH
Confidence            699999999  9999999999999999887  765544333210                  1 1245667777766666


Q ss_pred             CCCC
Q 011973          378 APKG  381 (474)
Q Consensus       378 a~~G  381 (474)
                      |-+|
T Consensus        61 al~g   64 (317)
T CHL00194         61 SFKG   64 (317)
T ss_pred             HHCC
Confidence            5555

>PRK07340 ornithine cyclodeaminase; Validated

Probab=96.05  E-value=0.054  Score=55.34  Aligned_cols=138  Identities=12%  Similarity=0.087  Sum_probs=89.7

Q ss_pred             cCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhHH
Q 011973          244 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  314 (474)
Q Consensus       244 ~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig~  314 (474)
                      .|+|+++.--=|..+.|..-.++.+.-+|+ +.-.-+.||+.+|+       |++.+-+ +++.++|.++|+-   ..|+
T Consensus        62 ~g~K~~~~~p~N~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaA~sala~~~La~~~~~~v~IiGaG---~qa~  138 (304)
T PRK07340         62 AITKLVTVCPGNAARGLPTIQGEVVVADAATGERLFLLDGPTVTGRRTAAVSLLAARTLAPAPPGDLLLIGTG---VQAR  138 (304)
T ss_pred             cEEEEEEeCCCCccCCCCcceEEEEEEECCCCcEEEEEcChhHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHHH
Confidence            588887743333333333333445555554 45599999999985       3444555 5678899999994   8999


Q ss_pred             HHHHHHhc-cC-cEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE----EcCcCChhhhhcCCCCcee
Q 011973          315 AVASSLCQ-MG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL----VGDDLTGKEQARAPKGTIF  384 (474)
Q Consensus       315 ava~~L~~-~~-v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi----vg~~i~~~eq~~a~~G~~f  384 (474)
                      +.+++||. ++ .++.+  |++++.+++.+++... ... +...+.+ + ++++|+|    ..+.+=..   |.+||+|+
T Consensus       139 ~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~-~~~-~~~~~~~~av~~aDiVitaT~s~~Pl~~~---~~~~g~hi  213 (304)
T PRK07340        139 AHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARAL-GPT-AEPLDGEAIPEAVDLVVTATTSRTPVYPE---AARAGRLV  213 (304)
T ss_pred             HHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhc-CCe-eEECCHHHHhhcCCEEEEccCCCCceeCc---cCCCCCEE
Confidence            99999983 55 45666  9999999999887532 112 1233444 3 7778777    22222222   34899999


Q ss_pred             ecccc
Q 011973          385 IPYTQ  389 (474)
Q Consensus       385 ~~~~~  389 (474)
                      ..+.-
T Consensus       214 ~~iGs  218 (304)
T PRK07340        214 VAVGA  218 (304)
T ss_pred             EecCC
Confidence            98863

>PLN02434 fatty acid hydroxylase

Probab=96.05  E-value=0.011  Score=58.90  Aligned_cols=32  Identities=25%  Similarity=0.550  Sum_probs=28.2

Q ss_pred             cchhhhhhhC-CCCCcccchhHHHHhcCCCCCC
Q 011973           81 PSYHSLHHTQ-FRTNYSLFMPIYDYIYGTIDRS  112 (474)
Q Consensus        81 P~~H~lHHs~-~~~NYg~~f~lWDrLFGT~~~~  112 (474)
                      =++|..||-+ .+.|||...++|||+|||+.++
T Consensus       198 kr~H~~HHfk~~~~~fGVTs~~wD~vFGT~~~~  230 (237)
T PLN02434        198 KKYHLNHHFRDQDKGFGITSSLWDRVFGTLPPS  230 (237)
T ss_pred             HHHHHHHcCCCCCCCCCcCchHHHHhcCCCCCc
Confidence            5799999966 7999999999999999999543

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.95  E-value=0.016  Score=55.23  Aligned_cols=42  Identities=21%  Similarity=0.306  Sum_probs=36.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  342 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~  342 (474)
                      +.|+++|++|  .||+++|+.|+++|.+|++   |+.++.+++.+++
T Consensus         5 ~~vlItGa~g--~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~   49 (250)
T PRK08063          5 KVALVTGSSR--GIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI   49 (250)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            5899999998  9999999999999999765   7777777776664

>PRK06196 oxidoreductase; Provisional

Probab=95.94  E-value=0.015  Score=58.31  Aligned_cols=56  Identities=16%  Similarity=0.126  Sum_probs=45.9

Q ss_pred             HHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          286 AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       286 taAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ++..+++.++...+.|+++|++|  -||+++|+.|+++|.+|++  |+.++.+++.+++.
T Consensus        14 ~~~~~~~~~~l~~k~vlITGasg--gIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~   71 (315)
T PRK06196         14 TAEEVLAGHDLSGKTAIVTGGYS--GLGLETTRALAQAGAHVIVPARRPDVAREALAGID   71 (315)
T ss_pred             cHHHHhcCCCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh
Confidence            35555666665567899999998  9999999999999999998  88888887776653

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.90  E-value=0.013  Score=59.91  Aligned_cols=148  Identities=16%  Similarity=0.186  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHcCCcEEEeccccccccccccCceeeecCCCCcceeeecCChhHHHHHHhcCcC-----CCcEEEEe
Q 011973          230 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAHVLLR  304 (474)
Q Consensus       230 in~~Ie~Ai~~A~k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~~ip~-----~~~~V~l~  304 (474)
                      |=.++.+|...|++.|.-=-   .||.   |= ..-+.+.|.-. -+..+-.|..=++..+++...+     ..++|+++
T Consensus       113 IlgQvk~A~~~a~~~g~~~~---~L~~---lf-~~a~~~~k~vr-~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~Vi  184 (311)
T cd05213         113 ILGQVKNAYKLAKEAGTSGK---LLNR---LF-QKAIKVGKRVR-TETGISRGAVSISSAAVELAEKIFGNLKGKKVLVI  184 (311)
T ss_pred             HHHHHHHHHHHHHHcCCchH---HHHH---HH-HHHHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEE
Confidence            44458899999999886311   1222   00 00112222211 1234444432233333444433     47889999


Q ss_pred             ccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEcCcCC-h----hh
Q 011973          305 GTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGDDLT-G----KE  374 (474)
Q Consensus       305 Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg~~i~-~----~e  374 (474)
                      |+ |  .+|+.++++|++.| .+|++  |+.++.++++++++..    .+...+.. . ..++++|.-..-. +    ++
T Consensus       185 Ga-G--~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~----~~~~~~~~~~l~~aDvVi~at~~~~~~~~~~~  257 (311)
T cd05213         185 GA-G--EMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN----AVPLDELLELLNEADVVISATGAPHYAKIVER  257 (311)
T ss_pred             Cc-H--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe----EEeHHHHHHHHhcCCEEEECCCCCchHHHHHH
Confidence            98 6  99999999999766 56666  8889999999887642    12122232 2 5667766322211 1    11


Q ss_pred             hh-cC-CCCceeecccccCcc
Q 011973          375 QA-RA-PKGTIFIPYTQIPPR  393 (474)
Q Consensus       375 q~-~a-~~G~~f~~~~~v~p~  393 (474)
                      .. .. .+|.+++|.+ +|+.
T Consensus       258 ~~~~~~~~~~~viDla-vPrd  277 (311)
T cd05213         258 AMKKRSGKPRLIVDLA-VPRD  277 (311)
T ss_pred             HHhhCCCCCeEEEEeC-CCCC
Confidence            11 11 2578899998 6655

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK06949 short chain dehydrogenase; Provisional

Probab=95.85  E-value=0.016  Score=55.40  Aligned_cols=47  Identities=21%  Similarity=0.269  Sum_probs=40.9

Q ss_pred             CcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          294 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       294 ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      ++...+.|+++|++|  -||+++|+.|+++|.+|++  |++++++++++++
T Consensus         5 ~~~~~k~ilItGasg--~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l   53 (258)
T PRK06949          5 INLEGKVALVTGASS--GLGARFAQVLAQAGAKVVLASRRVERLKELRAEI   53 (258)
T ss_pred             cCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            334568999999998  9999999999999999988  8889988887765

>PRK08339 short chain dehydrogenase; Provisional

Probab=95.81  E-value=0.019  Score=56.12  Aligned_cols=45  Identities=16%  Similarity=0.193  Sum_probs=39.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.++++|+++  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         8 ~k~~lItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   54 (263)
T PRK08339          8 GKLAFTTASSK--GIGFGVARVLARAGADVILLSRNEENLKKAREKIKS   54 (263)
T ss_pred             CCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            46789999997  9999999999999999998  888898888877543

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.81  E-value=0.034  Score=56.66  Aligned_cols=87  Identities=17%  Similarity=0.213  Sum_probs=59.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE--c-Cc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--G-DD  369 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv--g-~~  369 (474)
                      ..++|+|+|+ |  .+|++++..|.+.|.+|++  |+.++.+..++ ++...    +...+..+  +.++++|.  . ..
T Consensus       151 ~g~kvlViG~-G--~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-~G~~~----~~~~~l~~~l~~aDiVI~t~p~~~  222 (296)
T PRK08306        151 HGSNVLVLGF-G--RTGMTLARTLKALGANVTVGARKSAHLARITE-MGLSP----FHLSELAEEVGKIDIIFNTIPALV  222 (296)
T ss_pred             CCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCee----ecHHHHHHHhCCCCEEEECCChhh
Confidence            4689999997 5  8999999999999999998  66666554433 22111    21112222  56677662  2 23


Q ss_pred             CChhhhhcCCCCceeecccccCc
Q 011973          370 LTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       370 i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                      ++.+...++++|++++|++ ..|
T Consensus       223 i~~~~l~~~~~g~vIIDla-~~p  244 (296)
T PRK08306        223 LTKEVLSKMPPEALIIDLA-SKP  244 (296)
T ss_pred             hhHHHHHcCCCCcEEEEEc-cCC
Confidence            6677778899999999999 444

>PLN02780 ketoreductase/ oxidoreductase

Probab=95.76  E-value=0.012  Score=59.87  Aligned_cols=45  Identities=16%  Similarity=0.248  Sum_probs=40.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.|+++||+|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus        53 g~~~lITGAs~--GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~   99 (320)
T PLN02780         53 GSWALVTGPTD--GIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQS   99 (320)
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
Confidence            46799999997  9999999999999999998  999999998887643

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.74  E-value=0.022  Score=54.29  Aligned_cols=43  Identities=16%  Similarity=0.241  Sum_probs=38.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +.|+++|++|  .||+++|+.|.++|.+|.+  |++++.+++++++.
T Consensus         5 ~~vlItG~sg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~   49 (258)
T PRK12429          5 KVALVTGAAS--GIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQ   49 (258)
T ss_pred             CEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH
Confidence            6899999998  9999999999999999988  88888888777653

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.73  E-value=0.023  Score=54.08  Aligned_cols=44  Identities=20%  Similarity=0.341  Sum_probs=37.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.++++|++|  .||+++|+.|+++|.+|.+  |+.++.+.+.+++.
T Consensus         6 ~k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (241)
T PRK07454          6 MPRALITGASS--GIGKATALAFAKAGWDLALVARSQDALEALAAELR   51 (241)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  88888777766643

>PRK06141 ornithine cyclodeaminase; Validated

Probab=95.72  E-value=0.09  Score=53.86  Aligned_cols=138  Identities=21%  Similarity=0.197  Sum_probs=85.5

Q ss_pred             cCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhHH
Q 011973          244 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  314 (474)
Q Consensus       244 ~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig~  314 (474)
                      .|+|+++.--=|....+-.--++.+.-+++ +.-+-+.||+.+|+       |++.+-+ +++.++|.++|+ |  ..|+
T Consensus        62 ~g~K~~~~~p~N~~~glp~~~g~v~l~d~~tG~p~ai~d~~~lT~~RTaa~sala~~~La~~~~~~v~iiG~-G--~~a~  138 (314)
T PRK06141         62 IGVKAVTVFPGNPARGLPGLHSTYLLFDGRTGEPLALVDGTELTARRTAAASALAASYLARKDASRLLVVGT-G--RLAS  138 (314)
T ss_pred             eEEEEEeecCCCCcCCCCceEEEEEEEECCCCCEEEEEcCcchhcchhHHHHHHHHHHhCCCCCceEEEECC-c--HHHH
Confidence            588988843323222222222345555554 35589999999974       2333333 567889999996 5  8999


Q ss_pred             HHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE----cCc-CChhhhhcCCCCce
Q 011973          315 AVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV----GDD-LTGKEQARAPKGTI  383 (474)
Q Consensus       315 ava~~L~--~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv----g~~-i~~~eq~~a~~G~~  383 (474)
                      .++++|+  +...+|.+  |++++.+++.+++... +....-..+.+ + ++++|++.    .+. ++.   .+.++|++
T Consensus       139 ~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~-g~~~~~~~~~~~av~~aDIVi~aT~s~~pvl~~---~~l~~g~~  214 (314)
T PRK06141        139 LLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQ-GFDAEVVTDLEAAVRQADIISCATLSTEPLVRG---EWLKPGTH  214 (314)
T ss_pred             HHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhc-CCceEEeCCHHHHHhcCCEEEEeeCCCCCEecH---HHcCCCCE
Confidence            9999888  44466777  9999999999886542 11212123433 3 67777662    111 222   35689997


Q ss_pred             eeccc
Q 011973          384 FIPYT  388 (474)
Q Consensus       384 f~~~~  388 (474)
                      +..+.
T Consensus       215 i~~ig  219 (314)
T PRK06141        215 LDLVG  219 (314)
T ss_pred             EEeeC
Confidence            66554

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.69  E-value=0.019  Score=55.99  Aligned_cols=44  Identities=20%  Similarity=0.243  Sum_probs=38.9

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ++|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+.++++.+.
T Consensus         3 k~vlVtGasg--~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~   48 (276)
T PRK06482          3 KTWFITGASS--GFGRGMTERLLARGDRVAATVRRPDALDDLKARYGD   48 (276)
T ss_pred             CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccC
Confidence            5799999998  9999999999999999988  888888888776543

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.69  E-value=0.03  Score=53.11  Aligned_cols=44  Identities=14%  Similarity=0.273  Sum_probs=38.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|.++|.+|++  |+.++.+.+.+++.
T Consensus         5 ~~~vlItGasg--~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~   50 (251)
T PRK07231          5 GKVAIVTGASS--GIGEGIARRFAAEGARVVVTDRNEEAAERVAAEIL   50 (251)
T ss_pred             CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence            35899999998  9999999999999999988  88888887777654

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.65  E-value=0.025  Score=54.36  Aligned_cols=44  Identities=18%  Similarity=0.289  Sum_probs=38.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         6 ~k~~lItGas~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~   51 (254)
T PRK07478          6 GKVAIITGASS--GIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIR   51 (254)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            35799999998  9999999999999999998  88888888877753

>PRK06046 alanine dehydrogenase; Validated

Probab=95.65  E-value=0.11  Score=53.59  Aligned_cols=141  Identities=16%  Similarity=0.196  Sum_probs=88.4

Q ss_pred             HcCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhH
Q 011973          243 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  313 (474)
Q Consensus       243 k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig  313 (474)
                      ..|+|+++.--=|..+.+..-.++.+.-.++ +.-..+.||+.+|+       |++.+-+ +++.+.|.++|+-   ..|
T Consensus        65 ~~g~K~~~~~p~N~~~glp~~~g~i~L~d~~tG~p~aild~~~lT~~RTaA~sala~~~La~~~~~~vgiiG~G---~qa  141 (326)
T PRK06046         65 IAGVKIVNVHPGNPDRGLPTVMAVIILNSPETGFPLAIMDGTYLTDMRTGAAGGVAAKYLARKDSKVVGIIGAG---NQA  141 (326)
T ss_pred             eEEEEEEeeCCCCcccCCCceeEEEEEEeCCCCceEEEEcCccHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHH
Confidence            4688888864434333333323345555544 35589999999985       2333555 6688899999987   799


Q ss_pred             HHHHHHHh-ccCcEEEe---cchhhHHHHHhhCccccccceeeeccccc-CceeEEEEcC-----cCChhhhhcCCCCce
Q 011973          314 NAVASSLC-QMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLVGD-----DLTGKEQARAPKGTI  383 (474)
Q Consensus       314 ~ava~~L~-~~~v~v~l---~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-~~~~vwivg~-----~i~~~eq~~a~~G~~  383 (474)
                      ++.++.|+ .++++...   |++++.+++++++.+..+..+....+.++ ..+++++.-.     .++.+   |.++|+|
T Consensus       142 ~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~aDiVv~aTps~~P~~~~~---~l~~g~h  218 (326)
T PRK06046        142 RTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACDCDILVTTTPSRKPVVKAE---WIKEGTH  218 (326)
T ss_pred             HHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhhCCEEEEecCCCCcEecHH---HcCCCCE
Confidence            99999998 44555544   89999999988875443333222334443 2277755211     12233   4589999


Q ss_pred             eecccc
Q 011973          384 FIPYTQ  389 (474)
Q Consensus       384 f~~~~~  389 (474)
                      +..+.-
T Consensus       219 V~~iGs  224 (326)
T PRK06046        219 INAIGA  224 (326)
T ss_pred             EEecCC
Confidence            988763

>PRK05867 short chain dehydrogenase; Provisional

Probab=95.61  E-value=0.017  Score=55.56  Aligned_cols=45  Identities=29%  Similarity=0.320  Sum_probs=39.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++.
T Consensus         8 ~~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   54 (253)
T PRK05867          8 HGKRALITGAST--GIGKRVALAYVEAGAQVAIAARHLDALEKLADEIG   54 (253)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence            457899999998  9999999999999999998  88888888877754

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.59  E-value=0.02  Score=54.92  Aligned_cols=41  Identities=17%  Similarity=0.313  Sum_probs=37.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+++++++++++
T Consensus         2 ~~vlItGas~--giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~   44 (240)
T PRK06101          2 TAVLITGATS--GIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ   44 (240)
T ss_pred             cEEEEEcCCc--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh
Confidence            5689999998  9999999999999999988  888888888765

>PRK06823 ornithine cyclodeaminase; Validated

Probab=95.58  E-value=0.14  Score=52.84  Aligned_cols=138  Identities=17%  Similarity=0.085  Sum_probs=88.6

Q ss_pred             cCCcEEEeccccccccccccCceeeecCCC-Ccceeee-cCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhH
Q 011973          244 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVV-DGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  313 (474)
Q Consensus       244 ~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv-~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig  313 (474)
                      .|+|+++.--=|....+-.--++.+.-+|. +.-+.+. ||+.+|+       |+..+-+ +++.+++.++|+-   ..|
T Consensus        64 ~g~K~v~~~p~N~~~glP~~~g~v~l~d~~TG~p~Ail~d~~~lT~~RTaA~sala~~~La~~d~~~l~iiG~G---~qA  140 (315)
T PRK06823         64 FVVKVSTGFYDNPAQGLPSNQGLMLAFSAKTGEPQALLLDEGWLTALRTALAGRIVARLLAPQHVSAIGIVGTG---IQA  140 (315)
T ss_pred             EEEEEEeecCCCccCCCCCeeEEEEEEECCCCceEEEEcCCChHHHHHHHHHHHHHHHHhcCCCCCEEEEECCc---HHH
Confidence            678887643333322232223344555555 3346675 9999975       3334444 6788999999987   899


Q ss_pred             HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE----cCc-CChhhhhcCCCCc
Q 011973          314 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV----GDD-LTGKEQARAPKGT  382 (474)
Q Consensus       314 ~ava~~L~--~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv----g~~-i~~~eq~~a~~G~  382 (474)
                      +.-++++|  +.-.+|.+  |++++.+.+++++.+. +..+.-+.+.+ + ++++|++-    .+. ++.+   |.+||+
T Consensus       141 ~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIV~taT~s~~P~~~~~---~l~~G~  216 (315)
T PRK06823        141 RMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQAL-GFAVNTTLDAAEVAHAANLIVTTTPSREPLLQAE---DIQPGT  216 (315)
T ss_pred             HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhc-CCcEEEECCHHHHhcCCCEEEEecCCCCceeCHH---HcCCCc
Confidence            99999999  66667777  9999999988776432 33322233444 3 78888771    122 3333   458999


Q ss_pred             eeeccc
Q 011973          383 IFIPYT  388 (474)
Q Consensus       383 ~f~~~~  388 (474)
                      ++..+.
T Consensus       217 hi~~iG  222 (315)
T PRK06823        217 HITAVG  222 (315)
T ss_pred             EEEecC
Confidence            999886

>PRK08265 short chain dehydrogenase; Provisional

Probab=95.57  E-value=0.02  Score=55.70  Aligned_cols=44  Identities=25%  Similarity=0.307  Sum_probs=39.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|++  |+.++.+++.+++.
T Consensus         6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (261)
T PRK08265          6 GKVAIVTGGAT--LIGAAVARALVAAGARVAIVDIDADNGAAVAASLG   51 (261)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence            46899999998  9999999999999999998  88888888887764

>PRK06924 short chain dehydrogenase; Provisional

Probab=95.57  E-value=0.031  Score=53.39  Aligned_cols=41  Identities=24%  Similarity=0.372  Sum_probs=34.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch-hhHHHHHhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLR  341 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~-~~~~~l~~~  341 (474)
                      +.|+++|++|  -||+++|+.|+++|.+|++  |++ ++++++.++
T Consensus         2 k~vlItGasg--giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   45 (251)
T PRK06924          2 RYVIITGTSQ--GLGEAIANQLLEKGTHVISISRTENKELTKLAEQ   45 (251)
T ss_pred             cEEEEecCCc--hHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc
Confidence            4799999998  9999999999999999988  655 556655544

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.52  E-value=0.037  Score=56.58  Aligned_cols=90  Identities=18%  Similarity=0.227  Sum_probs=61.6

Q ss_pred             HHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc
Q 011973          286 AAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  358 (474)
Q Consensus       286 taAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~  358 (474)
                      |++.|++-+.     -.-++|+|+|+.+  -+|+.+|..|.++|..|++  ++..   +|++.         +       
T Consensus       141 Tp~ai~~ll~~~~i~l~Gk~vvVIGrs~--~VG~pla~lL~~~gatVtv~~s~t~---~l~~~---------~-------  199 (286)
T PRK14175        141 TPLGIMEILKHADIDLEGKNAVVIGRSH--IVGQPVSKLLLQKNASVTILHSRSK---DMASY---------L-------  199 (286)
T ss_pred             cHHHHHHHHHHcCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCeEEEEeCCch---hHHHH---------H-------
Confidence            6666665543     3578999999996  7999999999999999999  2211   11110         0       


Q ss_pred             CceeEEE--EcCc--CChhhhhcCCCCceeecccccCcc---CCCCCee
Q 011973          359 HKTKIWL--VGDD--LTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF  400 (474)
Q Consensus       359 ~~~~vwi--vg~~--i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~  400 (474)
                      ++++++|  +|+-  ++++.   .++|++++|+. +++.   ++--||-
T Consensus       200 ~~ADIVIsAvg~p~~i~~~~---vk~gavVIDvG-i~~~~~gkl~GDvd  244 (286)
T PRK14175        200 KDADVIVSAVGKPGLVTKDV---VKEGAVIIDVG-NTPDENGKLKGDVD  244 (286)
T ss_pred             hhCCEEEECCCCCcccCHHH---cCCCcEEEEcC-CCcCCCCCeecCcc
Confidence            3555655  4443  77754   48999999999 7763   3445555

>PRK06194 hypothetical protein; Provisional

Probab=95.51  E-value=0.029  Score=54.92  Aligned_cols=43  Identities=14%  Similarity=0.251  Sum_probs=37.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +.|+|+|++|  -||+++|+.|+++|.+|++  |+.++++++.+++.
T Consensus         7 k~vlVtGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (287)
T PRK06194          7 KVAVITGAAS--GFGLAFARIGAALGMKLVLADVQQDALDRAVAELR   51 (287)
T ss_pred             CEEEEeCCcc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Confidence            5799999998  9999999999999999988  77777777776654

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=95.51  E-value=0.071  Score=58.99  Aligned_cols=123  Identities=17%  Similarity=0.188  Sum_probs=81.7

Q ss_pred             HHHHHHHcCCc--EEEeccccc------cccccccCceeeecCCCCcceeeecCChhHHHHHHhcCcC------------
Q 011973          237 AILEADAKGVK--VISLGLLNQ------GEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK------------  296 (474)
Q Consensus       237 Ai~~A~k~G~k--V~~LG~ln~------~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~~ip~------------  296 (474)
                      -...+++.+++  +++...+++      .+.+|..| +.+..-|+ +.. +++    . +.-++.|.-            
T Consensus       169 i~~~v~~~~~~~iiiAips~~~~~~~~i~~~l~~~~-~~v~~lP~-~~~-l~~----~-~~~lreI~ieDLLgR~pV~~d  240 (588)
T COG1086         169 IERVVEELGIQLILIAIPSASQEERRRILLRLARTG-IAVRILPQ-LTD-LKD----L-NGQLREIEIEDLLGRPPVALD  240 (588)
T ss_pred             HHHHHHHcCCceEEEecCCCCHHHHHHHHHHHHhcC-CcEEecCc-HHH-HHH----h-ccccccCCHHHHhCCCCCCCC
Confidence            44467788888  777777777      45677777 57777777 441 111    1 111444421            


Q ss_pred             --------CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeecccccCcee-EE
Q 011973          297 --------TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTK-IW  364 (474)
Q Consensus       297 --------~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~~-vw  364 (474)
                              ..++|+|+||+|  +||+.+|+-+++.+.+.++   +++-.+..+++++.+..+ +           .+ .-
T Consensus       241 ~~~i~~~~~gK~vLVTGagG--SiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~-----------~~~~~  306 (588)
T COG1086         241 TELIGAMLTGKTVLVTGGGG--SIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-E-----------LKLRF  306 (588)
T ss_pred             HHHHHhHcCCCEEEEeCCCC--cHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC-C-----------cceEE
Confidence                    378999999999  9999999999987877766   777777777777655442 1           12 24


Q ss_pred             EEcCcCChhhhhcCCCC
Q 011973          365 LVGDDLTGKEQARAPKG  381 (474)
Q Consensus       365 ivg~~i~~~eq~~a~~G  381 (474)
                      +.||.-|.+-...+-.|
T Consensus       307 ~igdVrD~~~~~~~~~~  323 (588)
T COG1086         307 YIGDVRDRDRVERAMEG  323 (588)
T ss_pred             EecccccHHHHHHHHhc
Confidence            56777777666555444

>PRK08643 acetoin reductase; Validated

Probab=95.50  E-value=0.03  Score=53.71  Aligned_cols=43  Identities=21%  Similarity=0.264  Sum_probs=37.8

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +.++++|++|  -||+++|++|+++|.+|.+  |+.++.+++++++.
T Consensus         3 k~~lItGas~--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~   47 (256)
T PRK08643          3 KVALVTGAGQ--GIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLS   47 (256)
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            5789999998  9999999999999999988  88888888877754

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.48  E-value=0.044  Score=55.38  Aligned_cols=127  Identities=13%  Similarity=0.054  Sum_probs=77.5

Q ss_pred             ecCChhHHHHHHhcC--cCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeee-
Q 011973          280 VDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLS-  353 (474)
Q Consensus       280 v~GnsltaAvvl~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~-  353 (474)
                      |||.-...+.--..+  +...++|+|+||-   -.|+|++.+|.+.|+ ++++  |+.+|.++|.+++........+.. 
T Consensus       105 TD~~G~~~~l~~~~~~~~~~~k~vlvlGaG---Gaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~  181 (282)
T TIGR01809       105 TDWDGIAGALANIGKFEPLAGFRGLVIGAG---GTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGD  181 (282)
T ss_pred             CCHHHHHHHHHhhCCccccCCceEEEEcCc---HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccch
Confidence            667766666543332  2245689999996   589999999999997 5777  999999999888643321110111 


Q ss_pred             ccc-cc-CceeEEE----EcCcCChhhhhc---------CCCCceeecccccCcc-----CCC-CCeeeecCCcccc
Q 011973          354 TSY-AA-HKTKIWL----VGDDLTGKEQAR---------APKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  409 (474)
Q Consensus       354 t~~-~~-~~~~vwi----vg~~i~~~eq~~---------a~~G~~f~~~~~v~p~-----~~R-~dc~y~~~~am~v  409 (474)
                      ... +. ..++++|    +|..++++++..         .+++..+.|..=-|.+     ..| +-|....+..|-+
T Consensus       182 ~~~~~~~~~~DiVInaTp~g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv  258 (282)
T TIGR01809       182 SGGLAIEKAAEVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAYDPWPTPLVAIVSAAGWRVISGLQMLL  258 (282)
T ss_pred             hhhhhcccCCCEEEECCCCCCCCCHHHhhhhhhhhccccCCCCcEEEEEeeCCCCCHHHHHHHHCCCEEECcHHHHH
Confidence            111 12 4567777    676666655421         2456677777732222     112 4466666666654

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.46  E-value=0.041  Score=51.99  Aligned_cols=88  Identities=20%  Similarity=0.296  Sum_probs=60.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--Ec--CcC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VG--DDL  370 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg--~~i  370 (474)
                      .-++|+|+|--   ++|+.||+.|...|.+|++...|....||.-. .+.+     +.+.+ + .+++++|  -|  +.|
T Consensus        22 ~Gk~vvV~GYG---~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-dGf~-----v~~~~~a~~~adi~vtaTG~~~vi   92 (162)
T PF00670_consen   22 AGKRVVVIGYG---KVGKGIARALRGLGARVTVTEIDPIRALQAAM-DGFE-----VMTLEEALRDADIFVTATGNKDVI   92 (162)
T ss_dssp             TTSEEEEE--S---HHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-TT-E-----EE-HHHHTTT-SEEEE-SSSSSSB
T ss_pred             CCCEEEEeCCC---cccHHHHHHHhhCCCEEEEEECChHHHHHhhh-cCcE-----ecCHHHHHhhCCEEEECCCCcccc
Confidence            56789999987   99999999999999999996667777776653 3331     22343 3 6667766  44  568


Q ss_pred             ChhhhhcCCCCceeecccccCcc
Q 011973          371 TGKEQARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       371 ~~~eq~~a~~G~~f~~~~~v~p~  393 (474)
                      +.++...+|.|++++....++-+
T Consensus        93 ~~e~~~~mkdgail~n~Gh~d~E  115 (162)
T PF00670_consen   93 TGEHFRQMKDGAILANAGHFDVE  115 (162)
T ss_dssp             -HHHHHHS-TTEEEEESSSSTTS
T ss_pred             CHHHHHHhcCCeEEeccCcCcee
Confidence            99999999999999998876655

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.46  E-value=0.04  Score=52.54  Aligned_cols=44  Identities=20%  Similarity=0.330  Sum_probs=38.5

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +.|+++|++|  -||+++|+.|+++|.+|++  |+.++.+++.+++..
T Consensus         3 k~vlItGas~--giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~   48 (248)
T PRK08251          3 QKILITGASS--GLGAGMAREFAAKGRDLALCARRTDRLEELKAELLA   48 (248)
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh
Confidence            5799999998  9999999999999999988  888888888776543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.45  E-value=0.023  Score=54.68  Aligned_cols=45  Identities=20%  Similarity=0.213  Sum_probs=38.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..++|+++|++|  .||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         9 ~~k~vlItGa~g--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~   55 (255)
T PRK07523          9 TGRRALVTGSSQ--GIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLK   55 (255)
T ss_pred             CCCEEEEECCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence            457899999998  9999999999999999998  88888877766654

>PRK07109 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.031  Score=57.20  Aligned_cols=45  Identities=24%  Similarity=0.313  Sum_probs=39.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         7 ~~k~vlITGas~--gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~   53 (334)
T PRK07109          7 GRQVVVITGASA--GVGRATARAFARRGAKVVLLARGEEGLEALAAEIR   53 (334)
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999988  88999988887754

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.43  E-value=0.043  Score=58.47  Aligned_cols=151  Identities=19%  Similarity=0.203  Sum_probs=91.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE-----
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV-----  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv-----  366 (474)
                      ..++|+++|+ |  .+|+.++++|.+.| .+|++  |+.++.+.+.++++...    +...+.. . ..++++|.     
T Consensus       179 ~~~~VlViGa-G--~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~----i~~~~l~~~l~~aDvVi~aT~s~  251 (417)
T TIGR01035       179 KGKKALLIGA-G--EMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA----VKFEDLEEYLAEADIVISSTGAP  251 (417)
T ss_pred             cCCEEEEECC-h--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE----eeHHHHHHHHhhCCEEEECCCCC
Confidence            4578999998 7  99999999999989 56777  88888888888765421    2112232 2 56677662     


Q ss_pred             cCcCChhhhhcCC----CCceeecccccCcc---CC--CCCeeeecCCccccCCCCccccccccccCcchhHHHHHhhhh
Q 011973          367 GDDLTGKEQARAP----KGTIFIPYTQIPPR---KL--RKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGII  437 (474)
Q Consensus       367 g~~i~~~eq~~a~----~G~~f~~~~~v~p~---~~--R~dc~y~~~~am~vP~~~~~~~~~e~~~prr~~~Ac~a~~~v  437 (474)
                      .-.+++++...+.    .+.+++|.+ +|+.   +.  -+++.+..      -++++.+  ++-.+..|.-.+=.|+.||
T Consensus       252 ~~ii~~e~l~~~~~~~~~~~~viDla-~Prdid~~v~~l~~v~l~~------vDdl~~~--~~~n~~~r~~~~~~a~~ii  322 (417)
T TIGR01035       252 HPIVSKEDVERALRERTRPLFIIDIA-VPRDVDPAVARLEGVFLYD------VDDLQPV--VEENLAERREEAEKAEEIV  322 (417)
T ss_pred             CceEcHHHHHHHHhcCCCCeEEEEeC-CCCCCChhhcCcCCeEEEE------HHHHHHH--HHHhHHHHHHHHHHHHHHH
Confidence            2235666665542    356889998 6554   11  12222111      1122211  2334555665666788887


Q ss_pred             h----hhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 011973          438 H----ALEGWDLN-ECGQ-T--M-CDIHQVWHASL  463 (474)
Q Consensus       438 ~----alEgw~~~-e~G~-i--v-~~id~iw~aa~  463 (474)
                      -    +|+.|... ..-. |  + +++++|-+.-+
T Consensus       323 ~~~~~~f~~w~~~~~~~p~I~~lr~~~~~i~~~el  357 (417)
T TIGR01035       323 EEETAEFKQWLRSLEVEPTIKALRSLAEIVREKEL  357 (417)
T ss_pred             HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence            6    77777655 5555 4  3 66666654443

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.41  E-value=0.012  Score=54.24  Aligned_cols=102  Identities=24%  Similarity=0.289  Sum_probs=66.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE--E------
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--V------  366 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--v------  366 (474)
                      ++|-++|- |  ..|+++|+.|.+.|..|..  |++++.++++++-       .....+.++  +.+++++  +      
T Consensus         2 ~~Ig~IGl-G--~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g-------~~~~~s~~e~~~~~dvvi~~v~~~~~v   71 (163)
T PF03446_consen    2 MKIGFIGL-G--NMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAG-------AEVADSPAEAAEQADVVILCVPDDDAV   71 (163)
T ss_dssp             BEEEEE---S--HHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTT-------EEEESSHHHHHHHBSEEEE-SSSHHHH
T ss_pred             CEEEEEch-H--HHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhh-------hhhhhhhhhHhhcccceEeecccchhh
Confidence            47889998 5  9999999999999999999  8899999998772       111224432  5555544  2      


Q ss_pred             cCcCChhh-hhcCCCCceeecccccCcc-------CCC-CCeeeecCCccccC
Q 011973          367 GDDLTGKE-QARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIP  410 (474)
Q Consensus       367 g~~i~~~e-q~~a~~G~~f~~~~~v~p~-------~~R-~dc~y~~~~am~vP  410 (474)
                      .+.+..++ ...+++|++|++.+-.+|+       .++ +.+.|.+.|.+--|
T Consensus        72 ~~v~~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapV~Gg~  124 (163)
T PF03446_consen   72 EAVLFGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVDAPVSGGP  124 (163)
T ss_dssp             HHHHHCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEEEEEESHH
T ss_pred             hhhhhhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccceeeeeeeeccc
Confidence            22222211 2346899999999998887       222 67889988876543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR00518 alaDH alanine dehydrogenase

Probab=95.40  E-value=0.079  Score=55.68  Aligned_cols=92  Identities=15%  Similarity=0.179  Sum_probs=65.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE-----cC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV-----GD  368 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv-----g~  368 (474)
                      .++|+|+|+ |  .+|+.+|+.|.+.|.+|.+  ++.++.+.++++..........+...+. . +.++++|-     |+
T Consensus       167 ~~~VlViGa-G--~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~  243 (370)
T TIGR00518       167 PGDVTIIGG-G--VVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA  243 (370)
T ss_pred             CceEEEEcC-C--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence            456999999 6  8999999999999999888  7888888887765432100000011222 2 56677663     32


Q ss_pred             ----cCChhhhhcCCCCceeecccccCcc
Q 011973          369 ----DLTGKEQARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       369 ----~i~~~eq~~a~~G~~f~~~~~v~p~  393 (474)
                          .++.+..+.+++|.+++|++ +++-
T Consensus       244 ~~p~lit~~~l~~mk~g~vIvDva-~d~G  271 (370)
T TIGR00518       244 KAPKLVSNSLVAQMKPGAVIVDVA-IDQG  271 (370)
T ss_pred             CCCcCcCHHHHhcCCCCCEEEEEe-cCCC
Confidence                26888999999999999999 7776

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK09291 short chain dehydrogenase; Provisional

Probab=95.37  E-value=0.048  Score=52.13  Aligned_cols=41  Identities=20%  Similarity=0.260  Sum_probs=35.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      +.|+|+|++|  -||+++++.|+++|.+|..  |+.++.+++++.
T Consensus         3 ~~vlVtGasg--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~   45 (257)
T PRK09291          3 KTILITGAGS--GFGREVALRLARKGHNVIAGVQIAPQVTALRAE   45 (257)
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            4799999999  9999999999999999988  777777666654

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.37  E-value=0.022  Score=54.94  Aligned_cols=45  Identities=20%  Similarity=0.226  Sum_probs=39.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus         7 ~k~vlVtGas~--gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~   53 (260)
T PRK07063          7 GKVALVTGAAQ--GIGAAIARAFAREGAAVALADLDAALAERAAAAIAR   53 (260)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            46799999998  9999999999999999988  888889888877643

>PRK07825 short chain dehydrogenase; Provisional

Probab=95.36  E-value=0.026  Score=54.97  Aligned_cols=44  Identities=18%  Similarity=0.215  Sum_probs=38.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         5 ~~~ilVtGasg--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~   50 (273)
T PRK07825          5 GKVVAITGGAR--GIGLATARALAALGARVAIGDLDEALAKETAAELG   50 (273)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence            35799999998  9999999999999999988  88888888877654

>PRK07589 ornithine cyclodeaminase; Validated

Probab=95.34  E-value=0.13  Score=53.90  Aligned_cols=139  Identities=15%  Similarity=0.011  Sum_probs=90.6

Q ss_pred             HcCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhH
Q 011973          243 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  313 (474)
Q Consensus       243 k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig  313 (474)
                      -.|+|+++.=-=|....+-.--++.+.-+|+ +.-+-+.||+.+|+       |+..+-+ +++.+++.++|+-   ..|
T Consensus        65 ~~gvK~v~~~p~N~~~glP~i~g~v~L~D~~TG~p~Alldg~~lT~~RTaA~sala~~~Lar~da~~l~iiGaG---~QA  141 (346)
T PRK07589         65 LYSFKYVNGHPKNTRRGLQTVMAFGVLADVDTGYPLLLSEMTLLTALRTAATSALAAKYLARPDSRTMALIGNG---AQS  141 (346)
T ss_pred             ceEEEEEeeCCCccccCCCceeEEEEEEECCCCCEEEEEcCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---HHH
Confidence            3678887643334333333333334444544 34589999999984       3344555 6788899999987   799


Q ss_pred             HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEcC-------cCChhhhhcCCC
Q 011973          314 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGD-------DLTGKEQARAPK  380 (474)
Q Consensus       314 ~ava~~L~--~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg~-------~i~~~eq~~a~~  380 (474)
                      +.-++++|  +.-.+|.+  |++++.+.+.+++... +..+.-+.+.+ + ++++|++-=.       .++.   +|.++
T Consensus       142 ~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIIvtaT~S~~~~Pvl~~---~~lkp  217 (346)
T PRK07589        142 EFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGP-GLRIVACRSVAEAVEGADIITTVTADKTNATILTD---DMVEP  217 (346)
T ss_pred             HHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhc-CCcEEEeCCHHHHHhcCCEEEEecCCCCCCceecH---HHcCC
Confidence            99988888  66666666  9999999999887642 23322233444 3 7888877311       1333   35699


Q ss_pred             Cceeeccc
Q 011973          381 GTIFIPYT  388 (474)
Q Consensus       381 G~~f~~~~  388 (474)
                      |+|+.-+-
T Consensus       218 G~hV~aIG  225 (346)
T PRK07589        218 GMHINAVG  225 (346)
T ss_pred             CcEEEecC
Confidence            99988764

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.30  E-value=0.031  Score=53.96  Aligned_cols=44  Identities=18%  Similarity=0.363  Sum_probs=39.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+.+++++++++++.
T Consensus         3 ~~vlItGas~--gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~   48 (257)
T PRK07024          3 LKVFITGASS--GIGQALAREYARQGATLGLVARRTDALQAFAARLPK   48 (257)
T ss_pred             CEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc
Confidence            5799999998  9999999999999999998  888888888887654

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.30  E-value=0.025  Score=54.16  Aligned_cols=44  Identities=14%  Similarity=0.209  Sum_probs=38.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|++  |+.++.+++.+++.
T Consensus         5 ~k~vlItGa~~--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   50 (258)
T PRK07890          5 GKVVVVSGVGP--GLGRTLAVRAARAGADVVLAARTAERLDEVAAEID   50 (258)
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence            36799999998  9999999999999999998  88888888877754

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.27  E-value=0.024  Score=57.19  Aligned_cols=44  Identities=16%  Similarity=0.150  Sum_probs=38.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.++|+|+++  -||+++|+.|+++|.+|.+  |+.++.++..+++.
T Consensus        14 gk~~lITGas~--GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~   59 (313)
T PRK05854         14 GKRAVVTGASD--GLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIR   59 (313)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46899999997  9999999999999999998  89888887776654

>PRK08267 short chain dehydrogenase; Provisional

Probab=95.25  E-value=0.03  Score=54.00  Aligned_cols=43  Identities=16%  Similarity=0.299  Sum_probs=39.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+.+++++++++++
T Consensus         2 k~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   46 (260)
T PRK08267          2 KSIFITGAAS--GIGRATALLFAAEGWRVGAYDINEAGLAALAAELG   46 (260)
T ss_pred             cEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Confidence            5799999998  9999999999999999998  88999998888765

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=95.25  E-value=0.025  Score=53.77  Aligned_cols=42  Identities=19%  Similarity=0.241  Sum_probs=37.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      +.|+++|++|  .||+++|+.|+++|.+|.+  |+.++.+++.+++
T Consensus         2 ~~vlItGa~g--~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~   45 (255)
T TIGR01963         2 KTALVTGAAS--GIGLAIALALAAAGANVVVNDLGEAGAEAAAKVA   45 (255)
T ss_pred             CEEEEcCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            4699999998  9999999999999999988  8888888777664

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=95.22  E-value=0.04  Score=55.15  Aligned_cols=38  Identities=21%  Similarity=0.136  Sum_probs=32.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  338 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l  338 (474)
                      +.|+|+|++|  -||+++++.|.++|.+|..  |+.++.+.+
T Consensus         6 ~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   45 (322)
T PLN02986          6 KLVCVTGASG--YIASWIVKLLLLRGYTVKATVRDLTDRKKT   45 (322)
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCCcchHHH
Confidence            6899999999  9999999999999999975  766554443

>TIGR02415 23BDH acetoin reductases

Probab=95.20  E-value=0.042  Score=52.43  Aligned_cols=43  Identities=19%  Similarity=0.304  Sum_probs=36.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ++|+++|++|  -||+++++.|+++|.+|++  |+.++.+++.+++.
T Consensus         1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~   45 (254)
T TIGR02415         1 KVALVTGGAQ--GIGKGIAERLAKDGFAVAVADLNEETAKETAKEIN   45 (254)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            4689999998  9999999999999999988  77777777766643

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06500 short chain dehydrogenase; Provisional

Probab=95.19  E-value=0.035  Score=52.75  Aligned_cols=44  Identities=16%  Similarity=0.190  Sum_probs=38.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.++++++++
T Consensus         6 ~k~vlItGasg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~   51 (249)
T PRK06500          6 GKTALITGGTS--GIGLETARQFLAEGARVAITGRDPASLEAARAELG   51 (249)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC
Confidence            35799999998  9999999999999999988  88888888877764

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.045  Score=52.13  Aligned_cols=44  Identities=20%  Similarity=0.317  Sum_probs=37.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |+++..+++++++.
T Consensus         6 ~k~vlItGasg--~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~   51 (250)
T PRK07774          6 DKVAIVTGAAG--GIGQAYAEALAREGASVVVADINAEGAERVAKQIV   51 (250)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  77777777766643

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.16  E-value=0.034  Score=53.54  Aligned_cols=44  Identities=25%  Similarity=0.258  Sum_probs=39.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus         6 ~~~vlItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~   51 (257)
T PRK07067          6 GKVALLTGAAS--GIGEAVAERYLAEGARVVIADIKPARARLAALEIG   51 (257)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC
Confidence            46799999998  9999999999999999988  88888888877764

>PRK07326 short chain dehydrogenase; Provisional

Probab=95.16  E-value=0.03  Score=52.83  Aligned_cols=45  Identities=22%  Similarity=0.240  Sum_probs=39.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.|+++|++|  .||+++|+.|.++|.+|.+  |+.++.+++.+++..
T Consensus         6 ~~~ilItGatg--~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~   52 (237)
T PRK07326          6 GKVALITGGSK--GIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN   52 (237)
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhc
Confidence            36799999998  9999999999999999988  888888888777543

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.14  E-value=0.029  Score=54.22  Aligned_cols=43  Identities=21%  Similarity=0.264  Sum_probs=38.1

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +|+++|+++  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus         2 ~vlItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   46 (259)
T PRK08340          2 NVLVTASSR--GIGFNVARELLKKGARVVISSRNEENLEKALKELKE   46 (259)
T ss_pred             eEEEEcCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh
Confidence            689999998  9999999999999999998  888888888777643

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.14  E-value=0.045  Score=51.80  Aligned_cols=44  Identities=25%  Similarity=0.354  Sum_probs=37.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+.+.+++.
T Consensus         6 ~~~ilItGasg--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~   51 (251)
T PRK12826          6 GRVALVTGAAR--GIGRAIAVRLAADGAEVIVVDICGDDAAATAELVE   51 (251)
T ss_pred             CCEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            35799999998  9999999999999999988  88777776666543

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.13  E-value=0.12  Score=52.70  Aligned_cols=122  Identities=11%  Similarity=0.115  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHHHHcCCcEEEeccccccccccccCceeeecCCCCcceeeecCChhHHHHHHh--cCcCCCcEEEEeccCC
Q 011973          231 NSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVN--SLPKTTAHVLLRGTVT  308 (474)
Q Consensus       231 n~~Ie~Ai~~A~k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~--~ip~~~~~V~l~Gatg  308 (474)
                      .+.+.+++..|..       .|++|.   +| +|.++..+.   +-..=|+   ....-.++  .++-.-++|+|+|+.|
T Consensus       107 ~~~~ld~I~~aKD-------Vdg~n~---~n-~G~l~~~~~---~~~p~T~---~gii~~L~~~~i~l~Gk~vvViG~gg  169 (283)
T PRK14192        107 ERACFDAISLAKD-------VDGVTC---LG-FGRMAMGEA---AYGSATP---AGIMRLLKAYNIELAGKHAVVVGRSA  169 (283)
T ss_pred             HHHHHhccCHHHh-------cCCCCc---cc-cCccccCCC---cccCCcH---HHHHHHHHHcCCCCCCCEEEEECCcH
Confidence            3446666744444       356777   55 566554332   2222233   22222222  3455677999999997


Q ss_pred             CchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccccCceeEEEEc----CcCChhhhhcCCCCcee
Q 011973          309 ANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVG----DDLTGKEQARAPKGTIF  384 (474)
Q Consensus       309 ~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~~vwivg----~~i~~~eq~~a~~G~~f  384 (474)
                        -+|+++|..|.++|..|++-+. +-++|++.+                ++++++|..    +.++++.   .++|+++
T Consensus       170 --~vGkpia~~L~~~gatVtv~~~-~t~~L~~~~----------------~~aDIvI~AtG~~~~v~~~~---lk~gavV  227 (283)
T PRK14192        170 --ILGKPMAMMLLNANATVTICHS-RTQNLPELV----------------KQADIIVGAVGKPELIKKDW---IKQGAVV  227 (283)
T ss_pred             --HHHHHHHHHHHhCCCEEEEEeC-CchhHHHHh----------------ccCCEEEEccCCCCcCCHHH---cCCCCEE
Confidence              8999999999999999998111 222333322                244555522    2455544   4999999


Q ss_pred             ecccccCc
Q 011973          385 IPYTQIPP  392 (474)
Q Consensus       385 ~~~~~v~p  392 (474)
                      +|+. +.|
T Consensus       228 iDvg-~n~  234 (283)
T PRK14192        228 VDAG-FHP  234 (283)
T ss_pred             EEEE-Eee
Confidence            9998 555

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=95.12  E-value=0.05  Score=52.80  Aligned_cols=49  Identities=14%  Similarity=0.135  Sum_probs=41.1

Q ss_pred             cCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          293 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       293 ~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+...+.++++|+++  -||+++|+.|+++|.+|.+  |+.++++++.+++.
T Consensus         5 ~~~~~~k~~lItGa~~--~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~   55 (265)
T PRK07097          5 LFSLKGKIALITGASY--GIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYR   55 (265)
T ss_pred             ccCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH
Confidence            3445567899999998  9999999999999999988  88888887776653

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.11  E-value=0.033  Score=53.48  Aligned_cols=45  Identities=16%  Similarity=0.316  Sum_probs=39.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.++|+|++|  .||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus         8 ~~k~~lItGas~--giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~   54 (254)
T PRK08085          8 AGKNILITGSAQ--GIGFLLATGLAEYGAEIIINDITAERAELAVAKLR   54 (254)
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH
Confidence            456899999998  9999999999999999999  88888887776654

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=95.10  E-value=0.046  Score=52.44  Aligned_cols=38  Identities=24%  Similarity=0.269  Sum_probs=35.8

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  339 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~  339 (474)
                      .|+|+||||  .||+++|+.|.++|.+|..  |+.++...+.
T Consensus         2 ~ilV~GatG--~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~   41 (275)
T COG0702           2 KILVTGATG--FVGGAVVRELLARGHEVRAAVRNPEAAAALA   41 (275)
T ss_pred             eEEEEeccc--chHHHHHHHHHhCCCEEEEEEeCHHHHHhhc
Confidence            689999999  9999999999999999999  9999998887

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.09  E-value=0.036  Score=58.62  Aligned_cols=138  Identities=14%  Similarity=0.098  Sum_probs=75.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhcc-CcEEEe--cchhhHHHHHhhCccccccceeeecccc-c--CceeEEE--EcC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A--HKTKIWL--VGD  368 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~--~~~~vwi--vg~  368 (474)
                      ...+|+++||||  -+|+.+.+.|.++ +.+++.  ++++.-+.+...-+.-.+..+....+.+ +  +++|+++  ++.
T Consensus        37 ~~~kVaIvGATG--~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~  114 (381)
T PLN02968         37 EKKRIFVLGASG--YTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH  114 (381)
T ss_pred             cccEEEEECCCC--hHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCH
Confidence            456999999999  9999999999955 888777  3322222222211111111111122222 2  5677766  455


Q ss_pred             cCChhhhhcCCCCceeecccccCcc-CCCCCeeeecC--CccccCCCCccccccccccC---------cc-hhHH-HHHh
Q 011973          369 DLTGKEQARAPKGTIFIPYTQIPPR-KLRKDCFYHST--PAMIIPPSLSNMHSCENWLG---------RR-VMSA-WRIA  434 (474)
Q Consensus       369 ~i~~~eq~~a~~G~~f~~~~~v~p~-~~R~dc~y~~~--~am~vP~~~~~~~~~e~~~p---------rr-~~~A-c~a~  434 (474)
                      ..+.+--..+.+|..+||.|-   . .+++|..|.+-  -....|+-.+.   +-+++|         ++ +.-+ |.+-
T Consensus       115 ~~s~~i~~~~~~g~~VIDlSs---~fRl~~~~~y~~~y~~p~~~pe~~~~---~~yglpE~~r~~i~~~~iIAnPgC~~t  188 (381)
T PLN02968        115 GTTQEIIKALPKDLKIVDLSA---DFRLRDIAEYEEWYGHPHRAPELQKE---AVYGLTELQREEIKSARLVANPGCYPT  188 (381)
T ss_pred             HHHHHHHHHHhCCCEEEEcCc---hhccCCcccchhccCCCCCCcccchh---hhcccchhCHHHhcCCCEEECCCCHHH
Confidence            444444444567988888872   2 34455665554  22233432221   124443         12 2222 9999


Q ss_pred             hhhhhhcC
Q 011973          435 GIIHALEG  442 (474)
Q Consensus       435 ~~v~alEg  442 (474)
                      +++++|--
T Consensus       189 ~~~laL~P  196 (381)
T PLN02968        189 GIQLPLVP  196 (381)
T ss_pred             HHHHHHHH
Confidence            99987743

>PRK05993 short chain dehydrogenase; Provisional

Probab=95.08  E-value=0.035  Score=54.58  Aligned_cols=41  Identities=20%  Similarity=0.271  Sum_probs=36.9

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+.++++.+++.
T Consensus         5 k~vlItGasg--giG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~   47 (277)
T PRK05993          5 RSILITGCSS--GIGAYCARALQSDGWRVFATCRKEEDVAALEAE   47 (277)
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC
Confidence            5799999998  9999999999999999998  888888888754

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.07  E-value=0.051  Score=51.00  Aligned_cols=42  Identities=24%  Similarity=0.313  Sum_probs=36.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      +.|+++|++|  .||+.+|+.|.++|.+|.+  |++++.+.+..++
T Consensus         6 ~~ilItGasg--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~   49 (246)
T PRK05653          6 KTALVTGASR--GIGRAIALRLAADGAKVVIYDSNEEAAEALAAEL   49 (246)
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Confidence            5799999998  9999999999999999888  8888777666553

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=95.06  E-value=0.027  Score=57.76  Aligned_cols=78  Identities=15%  Similarity=0.189  Sum_probs=49.1

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecccccCce-eEEEEcCcCChhhhh
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKT-KIWLVGDDLTGKEQA  376 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~-~vwivg~~i~~~eq~  376 (474)
                      |+|+||+|  +||+.+|+.|++.+. ++.+  +++..+..+++++.......-+        .. .+-++||.-+.+...
T Consensus         1 VLVTGa~G--SIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v--------~~~~~~vigDvrd~~~l~   70 (293)
T PF02719_consen    1 VLVTGAGG--SIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKV--------RFEIVPVIGDVRDKERLN   70 (293)
T ss_dssp             EEEETTTS--HHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTC--------EEEEE--CTSCCHHHHHH
T ss_pred             CEEEcccc--HHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCc--------ccccCceeecccCHHHHH
Confidence            78999999  999999999998886 4555  8888999999997543321101        11 235678887777654


Q ss_pred             cC----CCCceeeccc
Q 011973          377 RA----PKGTIFIPYT  388 (474)
Q Consensus       377 ~a----~~G~~f~~~~  388 (474)
                      .+    .+-.+||--+
T Consensus        71 ~~~~~~~pdiVfHaAA   86 (293)
T PF02719_consen   71 RIFEEYKPDIVFHAAA   86 (293)
T ss_dssp             HHTT--T-SEEEE---
T ss_pred             HHHhhcCCCEEEEChh
Confidence            44    4555555444

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.06  E-value=0.035  Score=53.08  Aligned_cols=41  Identities=27%  Similarity=0.348  Sum_probs=37.0

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      +|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++
T Consensus         2 ~vlItGas~--giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~   44 (223)
T PRK05884          2 EVLVTGGDT--DLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL   44 (223)
T ss_pred             eEEEEeCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence            589999998  9999999999999999988  8888888887765

>PRK05872 short chain dehydrogenase; Provisional

Probab=95.06  E-value=0.035  Score=55.31  Aligned_cols=46  Identities=17%  Similarity=0.244  Sum_probs=41.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.++++.
T Consensus         8 ~gk~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~   55 (296)
T PRK05872          8 AGKVVVVTGAAR--GIGAELARRLHARGAKLALVDLEEAELAALAAELGG   55 (296)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC
Confidence            356899999998  9999999999999999988  899999999888764

>PRK06199 ornithine cyclodeaminase; Validated

Probab=95.05  E-value=0.18  Score=53.40  Aligned_cols=155  Identities=13%  Similarity=0.108  Sum_probs=100.7

Q ss_pred             cCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhHH
Q 011973          244 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  314 (474)
Q Consensus       244 ~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig~  314 (474)
                      .|+|+++.=-=|....+..-.++.+.-+|+ +.-.-+.||+.+|+       |+..+-+ +++.+.+.++|+-   -.|+
T Consensus        92 ~gvK~v~~~p~N~~~glp~~~g~v~L~D~~TG~p~Ai~dg~~lTa~RTaA~salaa~~LAr~da~~l~iiG~G---~QA~  168 (379)
T PRK06199         92 AGVKWYGSNIANREKGLPRSILMFVLNDADTGAPLAIMSANLLSAYRTGAVPGVGARHLARKDSKVVGLLGPG---VMGK  168 (379)
T ss_pred             eEEEEeccCCCccccCCCceeEEEEEeeCCCCceEEEEcCcchhhhHHHHHHHHHHHHhccCCCCEEEEECCc---HHHH
Confidence            678888754334433444455556655655 34589999999985       4445656 6788999999987   7999


Q ss_pred             HHHHHHhc--c-CcEEEe--cchhhHHHHHhhCccccc-c-ceeeecccc-c-CceeEEEEcC-----------cCChhh
Q 011973          315 AVASSLCQ--M-GIKVAT--ICKDDYEKLKLRIPVEAQ-H-NLVLSTSYA-A-HKTKIWLVGD-----------DLTGKE  374 (474)
Q Consensus       315 ava~~L~~--~-~v~v~l--~~~~~~~~l~~~~~~~~~-~-~l~~~t~~~-~-~~~~vwivg~-----------~i~~~e  374 (474)
                      .-+++++.  . -.+|.+  |++++.+.+.+++..... . .+.-+.+.+ + ++++|++.=.           .++.+ 
T Consensus       169 ~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~s~~~~~s~~Pv~~~~-  247 (379)
T PRK06199        169 TILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNSGETGDPSTYPYVKRE-  247 (379)
T ss_pred             HHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccCCCCCCCCcCcEecHH-
Confidence            99999983  3 346666  999999999988765432 1 222233554 4 8888877322           23333 


Q ss_pred             hhcCCCCceeecccc--cCccCCCCC-eeeecC
Q 011973          375 QARAPKGTIFIPYTQ--IPPRKLRKD-CFYHST  404 (474)
Q Consensus       375 q~~a~~G~~f~~~~~--v~p~~~R~d-c~y~~~  404 (474)
                        |.++|+|+.-...  +|+.-++.| ..|-+.
T Consensus       248 --~lkpG~hv~~ig~~eld~~~l~~~a~vvvD~  278 (379)
T PRK06199        248 --WVKPGAFLLMPAACRIDEGMEQGDVRKVVDN  278 (379)
T ss_pred             --HcCCCcEEecCCcccCCHHHHhCCCcEEEcC
Confidence              5589999875432  555555553 444444

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=95.05  E-value=0.038  Score=53.46  Aligned_cols=45  Identities=18%  Similarity=0.251  Sum_probs=39.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.|+|+|++|  -||+++|+.|.++|.+|.+  |++++++++.++++.
T Consensus         6 ~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   52 (263)
T PRK06200          6 GQVALITGGGS--GIGRALVERFLAEGARVAVLERSAEKLASLRQRFGD   52 (263)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence            35799999997  9999999999999999988  888999988877643

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=95.04  E-value=0.039  Score=53.45  Aligned_cols=43  Identities=19%  Similarity=0.281  Sum_probs=38.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+++++++++++.
T Consensus         5 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~   49 (262)
T TIGR03325         5 GEVVLVTGGAS--GLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH   49 (262)
T ss_pred             CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc
Confidence            47899999998  9999999999999999998  8888888887654

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08017 oxidoreductase; Provisional

Probab=95.02  E-value=0.037  Score=52.86  Aligned_cols=40  Identities=23%  Similarity=0.295  Sum_probs=35.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++.+++
T Consensus         3 k~vlVtGasg--~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~   44 (256)
T PRK08017          3 KSVLITGCSS--GIGLEAALELKRRGYRVLAACRKPDDVARMNS   44 (256)
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh
Confidence            5799999998  9999999999999999988  88888777654

>PRK07831 short chain dehydrogenase; Provisional

Probab=94.99  E-value=0.057  Score=52.21  Aligned_cols=45  Identities=16%  Similarity=0.178  Sum_probs=37.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++| +-||+++|+.|+++|.+|.+  |+.++++...+++.
T Consensus        17 ~k~vlItG~sg-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~   63 (262)
T PRK07831         17 GKVVLVTAAAG-TGIGSATARRALEEGARVVISDIHERRLGETADELA   63 (262)
T ss_pred             CCEEEEECCCc-ccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence            46899999986 35999999999999999998  77777777666543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=94.98  E-value=0.078  Score=54.03  Aligned_cols=49  Identities=14%  Similarity=0.064  Sum_probs=38.2

Q ss_pred             hcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          292 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       292 ~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      ++......+|+|+|++|  -||+.+++.|.++|.+|..  |+.++.+.+.+++
T Consensus         4 ~~~~~~~~~vLVtG~~G--fIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~   54 (353)
T PLN02896          4 EGRESATGTYCVTGATG--YIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKW   54 (353)
T ss_pred             cccccCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhh
Confidence            34444567899999999  9999999999999999987  6666555554443

>PRK06197 short chain dehydrogenase; Provisional

Probab=94.97  E-value=0.053  Score=54.07  Aligned_cols=44  Identities=20%  Similarity=0.201  Sum_probs=36.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.++..+++
T Consensus        15 ~~k~vlItGas~--gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l   60 (306)
T PRK06197         15 SGRVAVVTGANT--GLGYETAAALAAKGAHVVLAVRNLDKGKAAAARI   60 (306)
T ss_pred             CCCEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            457899999998  9999999999999999877  8877766655443

>PRK07062 short chain dehydrogenase; Provisional

Probab=94.96  E-value=0.034  Score=53.72  Aligned_cols=46  Identities=15%  Similarity=0.161  Sum_probs=39.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.++++|+++  -||+++|+.|.++|.+|.+  |+.++++++.+++..
T Consensus         7 ~~k~~lItGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   54 (265)
T PRK07062          7 EGRVAVVTGGSS--GIGLATVELLLEAGASVAICGRDEERLASAEARLRE   54 (265)
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh
Confidence            356899999998  9999999999999999988  888888887776543

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.96  E-value=0.095  Score=48.16  Aligned_cols=74  Identities=15%  Similarity=0.143  Sum_probs=52.0

Q ss_pred             cCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--Ec
Q 011973          293 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VG  367 (474)
Q Consensus       293 ~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg  367 (474)
                      +++-..++|.++|.+.  .+|+.+|..|.++|..|++ .++.                    .+.+ . +.+||+|  +|
T Consensus        23 ~~~~~gk~v~VvGrs~--~vG~pla~lL~~~gatV~~~~~~t--------------------~~l~~~v~~ADIVvsAtg   80 (140)
T cd05212          23 GVRLDGKKVLVVGRSG--IVGAPLQCLLQRDGATVYSCDWKT--------------------IQLQSKVHDADVVVVGSP   80 (140)
T ss_pred             CCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeCCCC--------------------cCHHHHHhhCCEEEEecC
Confidence            4455788999999998  9999999999999999998 2111                    0112 1 4556655  33


Q ss_pred             --CcCChhhhhcCCCCceeecccccCc
Q 011973          368 --DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       368 --~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                        ..++++.   .++|++++|+. .+.
T Consensus        81 ~~~~i~~~~---ikpGa~Vidvg-~~~  103 (140)
T cd05212          81 KPEKVPTEW---IKPGATVINCS-PTK  103 (140)
T ss_pred             CCCccCHHH---cCCCCEEEEcC-CCc
Confidence              3355554   49999999987 443

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK12829 short chain dehydrogenase; Provisional

Probab=94.94  E-value=0.041  Score=52.68  Aligned_cols=45  Identities=20%  Similarity=0.420  Sum_probs=39.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..++|+++|++|  .||+++|+.|+++|.+|++  |++++.+.++++.+
T Consensus        10 ~~~~vlItGa~g--~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~   56 (264)
T PRK12829         10 DGLRVLVTGGAS--GIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP   56 (264)
T ss_pred             CCCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence            347899999998  9999999999999999988  88888888777654

>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]

Probab=94.93  E-value=0.072  Score=55.29  Aligned_cols=151  Identities=18%  Similarity=0.197  Sum_probs=106.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccc-c-CceeEEE----EcCcCC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL----VGDDLT  371 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi----vg~~i~  371 (474)
                      -+.++|+|--   ++|.-||.+|--.|-+|.+..-|..-.||... ++.     ++++.+ + +..+|.|    --|+|.
T Consensus       214 GKv~Vv~GYG---dVGKgCaqaLkg~g~~VivTEiDPI~ALQAaM-eG~-----~V~tm~ea~~e~difVTtTGc~dii~  284 (434)
T KOG1370|consen  214 GKVAVVCGYG---DVGKGCAQALKGFGARVIVTEIDPICALQAAM-EGY-----EVTTLEEAIREVDIFVTTTGCKDIIT  284 (434)
T ss_pred             ccEEEEeccC---ccchhHHHHHhhcCcEEEEeccCchHHHHHHh-hcc-----EeeeHHHhhhcCCEEEEccCCcchhh
Confidence            4456666654   99999999999999999997777888887763 222     345564 3 6777777    347889


Q ss_pred             hhhhhcCCCCceeecccccCcc----CCCCC-------------eeeecCCcccc--CCCCccccccccccCcchhHHHH
Q 011973          372 GKEQARAPKGTIFIPYTQIPPR----KLRKD-------------CFYHSTPAMII--PPSLSNMHSCENWLGRRVMSAWR  432 (474)
Q Consensus       372 ~~eq~~a~~G~~f~~~~~v~p~----~~R~d-------------c~y~~~~am~v--P~~~~~~~~~e~~~prr~~~Ac~  432 (474)
                      .+...+||.++++|-.-.|+-+    -+|.+             ...+++-.+.+  -+-+-|+. |-.+.|.=+||-.+
T Consensus       285 ~~H~~~mk~d~IvCN~Ghfd~EiDv~~L~~~~~~~~~vk~QvD~~~~~~gr~iIlLAeGRLvNL~-CatghpSFvmS~sf  363 (434)
T KOG1370|consen  285 GEHFDQMKNDAIVCNIGHFDTEIDVKWLNTPALTWENVKPQVDRYILPNGKHIILLAEGRLVNLG-CATGHPSFVMSNSF  363 (434)
T ss_pred             HHHHHhCcCCcEEeccccccceeehhhccCCcceeeecccccceeeccCCcEEEEEecCceeecc-cccCCCceEEecch
Confidence            9999999999999988775544    22211             11222222221  12366787 99999999999999


Q ss_pred             HhhhhhhhcCCCCCc----cch-h-hhhHHHH
Q 011973          433 IAGIIHALEGWDLNE----CGQ-T-MCDIHQV  458 (474)
Q Consensus       433 a~~~v~alEgw~~~e----~G~-i-v~~id~i  458 (474)
                      .--++.-+|=|++.+    .|- + ..++|+-
T Consensus       364 tnQvlAqIeLwt~p~~kY~~~V~~LPKklDE~  395 (434)
T KOG1370|consen  364 TNQVLAQIELWTAPEGKYKVGVYVLPKKLDEY  395 (434)
T ss_pred             HHHHHHHHHHhcCCCCccccceEecchhhHHH
Confidence            999999999999885    343 3 4788764

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=94.93  E-value=0.041  Score=52.82  Aligned_cols=46  Identities=15%  Similarity=0.149  Sum_probs=39.5

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ...+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++++.+.+++.
T Consensus         9 ~~~k~ilItGas~--~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~   56 (256)
T PRK06124          9 LAGQVALVTGSAR--GLGFEIARALAGAGAHVLVNGRNAATLEAAVAALR   56 (256)
T ss_pred             CCCCEEEEECCCc--hHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHH
Confidence            3567899999998  9999999999999999999  88888887776653

>PRK05866 short chain dehydrogenase; Provisional

Probab=94.92  E-value=0.035  Score=55.51  Aligned_cols=44  Identities=23%  Similarity=0.339  Sum_probs=39.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++.
T Consensus        40 ~k~vlItGasg--gIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~   85 (293)
T PRK05866         40 GKRILLTGASS--GIGEAAAEQFARRGATVVAVARREDLLDAVADRIT   85 (293)
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  88898888877753

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.92  E-value=0.034  Score=57.40  Aligned_cols=53  Identities=19%  Similarity=0.203  Sum_probs=45.0

Q ss_pred             HHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          290 VVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       290 vl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +.+.++-....++|+|+|+  -||+++|+.|+++|.+|.|  |+.++-++.++++..
T Consensus        27 ~~~~~~~~~~~~vVTGans--GIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~   81 (314)
T KOG1208|consen   27 VTHGIDLSGKVALVTGATS--GIGFETARELALRGAHVVLACRNEERGEEAKEQIQK   81 (314)
T ss_pred             eeccccCCCcEEEEECCCC--chHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            3444554557899999996  9999999999999999999  999999988888665

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=94.91  E-value=0.058  Score=51.42  Aligned_cols=42  Identities=19%  Similarity=0.133  Sum_probs=35.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  342 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~  342 (474)
                      +.|+++|++|  -||+++|+.|+++|.+|.+   |++++.+++.+++
T Consensus         3 k~ilItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~   47 (248)
T PRK06947          3 KVVLITGASR--GIGRATAVLAAARGWSVGINYARDAAAAEETADAV   47 (248)
T ss_pred             cEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            5799999998  9999999999999999876   5667777666554

>PRK07102 short chain dehydrogenase; Provisional

Probab=94.91  E-value=0.059  Score=51.43  Aligned_cols=42  Identities=19%  Similarity=0.295  Sum_probs=36.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      ++|+++|++|  -||+++|+.|+++|.+|++  |++++.+.+.+++
T Consensus         2 ~~vlItGas~--giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~   45 (243)
T PRK07102          2 KKILIIGATS--DIARACARRYAAAGARLYLAARDVERLERLADDL   45 (243)
T ss_pred             cEEEEEcCCc--HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH
Confidence            4799999998  9999999999999999988  8888777666553

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=94.88  E-value=0.061  Score=52.17  Aligned_cols=44  Identities=14%  Similarity=0.290  Sum_probs=36.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|+++  -||+++|+.|+++|.+|.+   +++++.+.+.+++.
T Consensus         8 ~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~   54 (260)
T PRK08416          8 GKTLVISGGTR--GIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLE   54 (260)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence            46899999997  9999999999999999987   46677777766543

>PRK06139 short chain dehydrogenase; Provisional

Probab=94.86  E-value=0.037  Score=56.81  Aligned_cols=44  Identities=14%  Similarity=0.243  Sum_probs=39.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         7 ~k~vlITGAs~--GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~   52 (330)
T PRK06139          7 GAVVVITGASS--GIGQATAEAFARRGARLVLAARDEEALQAVAEECR   52 (330)
T ss_pred             CCEEEEcCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            46899999997  9999999999999999999  99999998887754

>PRK06180 short chain dehydrogenase; Provisional

Probab=94.86  E-value=0.046  Score=53.62  Aligned_cols=43  Identities=14%  Similarity=0.142  Sum_probs=38.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.|+|+|++|  -||+++|+.|.++|.+|.+  |+.++.+.+++..
T Consensus         4 ~~~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~   48 (277)
T PRK06180          4 MKTWLITGVSS--GFGRALAQAALAAGHRVVGTVRSEAARADFEALH   48 (277)
T ss_pred             CCEEEEecCCC--hHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc
Confidence            35799999998  9999999999999999998  8888888887653

>PLN02253 xanthoxin dehydrogenase

Probab=94.83  E-value=0.065  Score=52.34  Aligned_cols=45  Identities=16%  Similarity=0.163  Sum_probs=38.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.+..+++.+++..
T Consensus        18 ~k~~lItGas~--gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~   64 (280)
T PLN02253         18 GKVALVTGGAT--GIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG   64 (280)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC
Confidence            46899999998  9999999999999999988  777777777777644

>PRK05717 oxidoreductase; Validated

Probab=94.81  E-value=0.058  Score=51.93  Aligned_cols=45  Identities=16%  Similarity=0.195  Sum_probs=38.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         9 ~~k~vlItG~sg--~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~   55 (255)
T PRK05717          9 NGRVALVTGAAR--GIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG   55 (255)
T ss_pred             CCCEEEEeCCcc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcC
Confidence            457899999998  9999999999999999988  77777777666553

>PRK12746 short chain dehydrogenase; Provisional

Probab=94.79  E-value=0.068  Score=51.14  Aligned_cols=43  Identities=23%  Similarity=0.223  Sum_probs=36.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~  342 (474)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+   |++++.+++.+++
T Consensus         6 ~~~ilItGasg--~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~   51 (254)
T PRK12746          6 GKVALVTGASR--GIGRAIAMRLANDGALVAIHYGRNKQAADETIREI   51 (254)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            36899999998  9999999999999999865   7777777666554

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=94.78  E-value=0.076  Score=56.92  Aligned_cols=89  Identities=21%  Similarity=0.272  Sum_probs=66.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc----
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG----  367 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg----  367 (474)
                      ..++|+++||.   ++|.-+|.+|+++|++.++   |+.+|-++|.++++.+.    +..+...+  .++||+|.+    
T Consensus       177 ~~~~vlvIGAG---em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~----~~l~el~~~l~~~DvVissTsa~  249 (414)
T COG0373         177 KDKKVLVIGAG---EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA----VALEELLEALAEADVVISSTSAP  249 (414)
T ss_pred             ccCeEEEEccc---HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee----ecHHHHHHhhhhCCEEEEecCCC
Confidence            68899999998   9999999999999966555   99999999999988222    21222222  677888844    


Q ss_pred             -CcCChhhhhcC---CCCceeecccccCcc
Q 011973          368 -DDLTGKEQARA---PKGTIFIPYTQIPPR  393 (474)
Q Consensus       368 -~~i~~~eq~~a---~~G~~f~~~~~v~p~  393 (474)
                       -+|+.++...+   ++..+++|++ +|+.
T Consensus       250 ~~ii~~~~ve~a~~~r~~~livDia-vPRd  278 (414)
T COG0373         250 HPIITREMVERALKIRKRLLIVDIA-VPRD  278 (414)
T ss_pred             ccccCHHHHHHHHhcccCeEEEEec-CCCC
Confidence             34666655544   4447899999 8887

>PRK06057 short chain dehydrogenase; Provisional

Probab=94.78  E-value=0.051  Score=52.34  Aligned_cols=44  Identities=16%  Similarity=0.122  Sum_probs=38.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus         7 ~~~vlItGasg--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~   52 (255)
T PRK06057          7 GRVAVITGGGS--GIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG   52 (255)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Confidence            36899999998  9999999999999999988  88888888777654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=94.77  E-value=0.04  Score=49.18  Aligned_cols=43  Identities=19%  Similarity=0.261  Sum_probs=35.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhcc-CcEEEe--cc--hhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT--IC--KDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l--~~--~~~~~~l~~~~~  343 (474)
                      +.|+++|+++  -||+++|+.|+++ +.+|.+  |+  .++.+++.++++
T Consensus         1 k~~lItGa~~--giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~   48 (167)
T PF00106_consen    1 KTVLITGASS--GIGRALARALARRGARVVILTSRSEDSEGAQELIQELK   48 (167)
T ss_dssp             EEEEEETTTS--HHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHH
T ss_pred             CEEEEECCCC--HHHHHHHHHHHhcCceEEEEeeeccccccccccccccc
Confidence            5789999997  9999999999988 556566  77  778888877765

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.77  E-value=0.075  Score=49.96  Aligned_cols=43  Identities=23%  Similarity=0.291  Sum_probs=33.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~-~~~~~l~~~~  342 (474)
                      .+.|+++|++|  .||+++|+.|+++|.+|.+  |+. ++.+.+.+++
T Consensus         5 ~~~vlItG~sg--~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~   50 (248)
T PRK05557          5 GKVALVTGASR--GIGRAIAERLAAQGANVVINYASSEAGAEALVAEI   50 (248)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence            46899999998  9999999999999999966  433 3455555443

>PRK09135 pteridine reductase; Provisional

Probab=94.75  E-value=0.078  Score=50.11  Aligned_cols=43  Identities=21%  Similarity=0.363  Sum_probs=35.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~~~~~~l~~~~  342 (474)
                      .+.|+++|++|  -||+.+|+.|+++|.+|.+  | ++++.+.+++++
T Consensus         6 ~~~vlItGa~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~   51 (249)
T PRK09135          6 AKVALITGGAR--RIGAAIARTLHAAGYRVAIHYHRSAAEADALAAEL   51 (249)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            46899999998  9999999999999999988  4 455566665544

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=94.74  E-value=0.052  Score=52.16  Aligned_cols=42  Identities=21%  Similarity=0.313  Sum_probs=37.5

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .|+++|++|  -||+++|+.|+++|.+|.+  |++++.+.++++++
T Consensus         2 ~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   45 (248)
T PRK10538          2 IVLVTGATA--GFGECITRRFIQQGHKVIATGRRQERLQELKDELG   45 (248)
T ss_pred             EEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence            589999998  9999999999999999998  88888888877654

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=94.73  E-value=0.066  Score=52.02  Aligned_cols=140  Identities=16%  Similarity=0.151  Sum_probs=87.8

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-Cccccccceeeeccccc--CceeEEE--EcCcCCh
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPVEAQHNLVLSTSYAA--HKTKIWL--VGDDLTG  372 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~-~~~~~~~~l~~~t~~~~--~~~~vwi--vg~~i~~  372 (474)
                      +|+++||+|  ++|+.++.-..+||.+|+-  ||..+...+|.. +.+..   +...++..+  ...+++|  .|.+...
T Consensus         2 KIaiIgAsG--~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~D---ifd~~~~a~~l~g~DaVIsA~~~~~~~   76 (211)
T COG2910           2 KIAIIGASG--KAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKD---IFDLTSLASDLAGHDAVISAFGAGASD   76 (211)
T ss_pred             eEEEEecCc--hhHHHHHHHHHhCCCeeEEEEeChHhccccccceeeccc---ccChhhhHhhhcCCceEEEeccCCCCC
Confidence            689999999  9999999999999999998  999877654322 11111   222222211  2333333  4444222


Q ss_pred             hhh-----------------------------hcCCCCceeecccccCcc-------------CCC----CCeeeecCCc
Q 011973          373 KEQ-----------------------------ARAPKGTIFIPYTQIPPR-------------KLR----KDCFYHSTPA  406 (474)
Q Consensus       373 ~eq-----------------------------~~a~~G~~f~~~~~v~p~-------------~~R----~dc~y~~~~a  406 (474)
                      .+.                             .-+-+|+..+|.-+||.+             .+|    -|-+|.+-++
T Consensus        77 ~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa  156 (211)
T COG2910          77 NDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAA  156 (211)
T ss_pred             hhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHH
Confidence            222                             123456777777777753             122    5778999999


Q ss_pred             cccCCCCccc-c------ccccccCcchhHHHHHhhhhhhhcCCC
Q 011973          407 MIIPPSLSNM-H------SCENWLGRRVMSAWRIAGIIHALEGWD  444 (474)
Q Consensus       407 m~vP~~~~~~-~------~~e~~~prr~~~Ac~a~~~v~alEgw~  444 (474)
                      +-.|+.=.|- .      -.|-.=..|..+|=-|.+||-++|.=.
T Consensus       157 ~f~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~  201 (211)
T COG2910         157 FFEPGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQ  201 (211)
T ss_pred             hcCCccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhccc
Confidence            9999742110 0      022223467888899999999999743

>PRK09072 short chain dehydrogenase; Provisional

Probab=94.72  E-value=0.067  Score=51.74  Aligned_cols=43  Identities=26%  Similarity=0.394  Sum_probs=38.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|++  |+.++.+++++++
T Consensus         5 ~~~vlItG~s~--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   49 (263)
T PRK09072          5 DKRVLLTGASG--GIGQALAEALAAAGARLLLVGRNAEKLEALAARL   49 (263)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            35799999998  9999999999999999998  8888898888776

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=94.71  E-value=0.046  Score=52.67  Aligned_cols=43  Identities=16%  Similarity=0.249  Sum_probs=37.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++++.+.+++
T Consensus        12 ~k~ilItGa~g--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i   56 (259)
T PRK08213         12 GKTALVTGGSR--GLGLQIAEALGEAGARVVLSARKAEELEEAAAHL   56 (259)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence            47899999998  9999999999999999988  8888888777664

>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]

Probab=94.68  E-value=0.19  Score=52.53  Aligned_cols=158  Identities=16%  Similarity=0.138  Sum_probs=102.6

Q ss_pred             HHcCCcEEEeccccc-cccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCch
Q 011973          242 DAKGVKVISLGLLNQ-GEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANK  311 (474)
Q Consensus       242 ~k~G~kV~~LG~ln~-~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~k  311 (474)
                      +-.|+|+++ |-... ...|..-.++.+--.|+ +..+-+.||+.+|+       |++.+-+ +++.+.+.++|+-   .
T Consensus        65 ~~~gvK~v~-~~p~N~~~glp~v~g~~~L~d~~TG~plal~d~~~lTa~RTaAasavAa~~LA~~da~~laiIGaG---~  140 (330)
T COG2423          65 DVAGVKIVG-VHPDNPARGLPTVSGVIVLFDAETGEPLALLDATRLTALRTAAASAVAAKYLARKDASTLAIIGAG---A  140 (330)
T ss_pred             CeEEEEEec-CcCCccccCCCcceEEEEEEecCCCCEEEEecCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---H
Confidence            345677766 22222 23344444445554544 35589999999985       3445544 6689999999987   8


Q ss_pred             hHHHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE-----EcCcCChhhhhcCCC
Q 011973          312 VANAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL-----VGDDLTGKEQARAPK  380 (474)
Q Consensus       312 ig~ava~~L~--~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi-----vg~~i~~~eq~~a~~  380 (474)
                      .++.-+++++  +.-.++.+  |+++.-+++.+.+.......+....+.+ + ..++|++     -.-.++.+.+   +|
T Consensus       141 qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~Pil~~~~l---~~  217 (330)
T COG2423         141 QARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEPVLKAEWL---KP  217 (330)
T ss_pred             HHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCCeecHhhc---CC
Confidence            9999999999  55555666  9999999888886666544433344544 3 6677766     2233444444   79


Q ss_pred             Cceeecccc-------cCcc-CCCCCeeeecCCc
Q 011973          381 GTIFIPYTQ-------IPPR-KLRKDCFYHSTPA  406 (474)
Q Consensus       381 G~~f~~~~~-------v~p~-~~R~dc~y~~~~a  406 (474)
                      |+|+.-+..       ++|+ -.|-||.+-+.+.
T Consensus       218 G~hI~aiGad~p~k~Eld~e~l~ra~~vvvD~~~  251 (330)
T COG2423         218 GTHINAIGADAPGKRELDPEVLARADRVVVDSLE  251 (330)
T ss_pred             CcEEEecCCCCcccccCCHHHHHhcCeEEEcCHH
Confidence            999998874       5555 3445577665554

>PRK05875 short chain dehydrogenase; Provisional

Probab=94.68  E-value=0.054  Score=52.66  Aligned_cols=44  Identities=20%  Similarity=0.222  Sum_probs=37.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+.+.+++
T Consensus         6 ~~k~vlItGasg--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l   51 (276)
T PRK05875          6 QDRTYLVTGGGS--GIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEI   51 (276)
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence            357899999998  9999999999999999998  7777777776664

>PRK12828 short chain dehydrogenase; Provisional

Probab=94.67  E-value=0.049  Score=51.01  Aligned_cols=42  Identities=19%  Similarity=0.119  Sum_probs=34.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      .+.|+++|++|  .||+++|+.|+++|.+|++  |+.++.++..++
T Consensus         7 ~k~vlItGatg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~   50 (239)
T PRK12828          7 GKVVAITGGFG--GLGRATAAWLAARGARVALIGRGAAPLSQTLPG   50 (239)
T ss_pred             CCEEEEECCCC--cHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHH
Confidence            46799999998  9999999999999999888  766665544433

>PRK06182 short chain dehydrogenase; Validated

Probab=94.67  E-value=0.056  Score=52.71  Aligned_cols=41  Identities=24%  Similarity=0.266  Sum_probs=35.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++++++.+
T Consensus         3 ~k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~l~~~~~   45 (273)
T PRK06182          3 KKVALVTGASS--GIGKATARRLAAQGYTVYGAARRVDKMEDLAS   45 (273)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence            36899999998  9999999999999999998  88888777654

>PRK08862 short chain dehydrogenase; Provisional

Probab=94.67  E-value=0.046  Score=52.76  Aligned_cols=43  Identities=5%  Similarity=0.156  Sum_probs=38.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.++++|+++  -||+++|+.|+++|.+|.+  |++++++++.+++
T Consensus         5 ~k~~lVtGas~--GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i   49 (227)
T PRK08862          5 SSIILITSAGS--VLGRTISCHFARLGATLILCDQDQSALKDTYEQC   49 (227)
T ss_pred             CeEEEEECCcc--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence            46899999997  9999999999999999999  8999988887664

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=94.66  E-value=0.06  Score=54.58  Aligned_cols=29  Identities=21%  Similarity=0.229  Sum_probs=27.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ++|+|+||+|  =||+++++.|.++|.+|..
T Consensus         1 ~~vlVTGatG--fIG~~l~~~L~~~G~~V~~   29 (343)
T TIGR01472         1 KIALITGITG--QDGSYLAEFLLEKGYEVHG   29 (343)
T ss_pred             CeEEEEcCCC--cHHHHHHHHHHHCCCEEEE
Confidence            4799999999  9999999999999999987

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK08703 short chain dehydrogenase; Provisional

Probab=94.65  E-value=0.048  Score=51.89  Aligned_cols=44  Identities=20%  Similarity=0.250  Sum_probs=38.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+.+.+++.
T Consensus         6 ~k~vlItG~sg--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~   51 (239)
T PRK08703          6 DKTILVTGASQ--GLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIV   51 (239)
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHH
Confidence            36899999998  9999999999999999998  88888888877653

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=94.62  E-value=0.065  Score=51.21  Aligned_cols=39  Identities=21%  Similarity=0.299  Sum_probs=32.2

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCcEEEe--cch--hhHHHHHhh
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLR  341 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~--~~~~~l~~~  341 (474)
                      |+|+||||  ++|+.|+++|.+.+.+|..  |+.  ++.++|+..
T Consensus         1 I~V~GatG--~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~   43 (233)
T PF05368_consen    1 ILVTGATG--NQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQAL   43 (233)
T ss_dssp             EEEETTTS--HHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHT
T ss_pred             CEEECCcc--HHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcc
Confidence            78999999  9999999999999998888  653  456666654

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK05876 short chain dehydrogenase; Provisional

Probab=94.62  E-value=0.047  Score=53.94  Aligned_cols=44  Identities=11%  Similarity=0.203  Sum_probs=38.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         6 ~k~vlVTGas~--gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~   51 (275)
T PRK05876          6 GRGAVITGGAS--GIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLR   51 (275)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            35799999998  9999999999999999998  88888887776653

>PRK12742 oxidoreductase; Provisional

Probab=94.60  E-value=0.06  Score=50.83  Aligned_cols=43  Identities=23%  Similarity=0.258  Sum_probs=36.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~  342 (474)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+   +++++.+++.+++
T Consensus         6 ~k~vlItGasg--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~   51 (237)
T PRK12742          6 GKKVLVLGGSR--GIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET   51 (237)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh
Confidence            46899999998  9999999999999999876   4667777776654

>PRK07074 short chain dehydrogenase; Provisional

Probab=94.59  E-value=0.06  Score=51.69  Aligned_cols=43  Identities=16%  Similarity=0.203  Sum_probs=38.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +.++++|++|  -||+++|+.|+++|.+|.+  |+.++.+.+.+++.
T Consensus         3 k~ilItGat~--~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~   47 (257)
T PRK07074          3 RTALVTGAAG--GIGQALARRFLAAGDRVLALDIDAAALAAFADALG   47 (257)
T ss_pred             CEEEEECCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence            5799999998  9999999999999999988  88888888877763

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=94.54  E-value=0.17  Score=55.27  Aligned_cols=143  Identities=17%  Similarity=0.192  Sum_probs=91.8

Q ss_pred             cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--Ec--C
Q 011973          295 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VG--D  368 (474)
Q Consensus       295 p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg--~  368 (474)
                      .-..++|.|+|.-   .||+++|+.|...|.+|+..+.+....++... .+.     +..+.+ . +.+|++|  .|  .
T Consensus       251 ~LaGKtVgVIG~G---~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~-~G~-----~~~~leell~~ADIVI~atGt~~  321 (476)
T PTZ00075        251 MIAGKTVVVCGYG---DVGKGCAQALRGFGARVVVTEIDPICALQAAM-EGY-----QVVTLEDVVETADIFVTATGNKD  321 (476)
T ss_pred             CcCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh-cCc-----eeccHHHHHhcCCEEEECCCccc
Confidence            3457799999966   89999999999999999883222222222111 111     112343 2 5666765  33  4


Q ss_pred             cCChhhhhcCCCCceeecccccCcc----CCC----CCeeee--cCCccccCC----------CCccccccccccCcchh
Q 011973          369 DLTGKEQARAPKGTIFIPYTQIPPR----KLR----KDCFYH--STPAMIIPP----------SLSNMHSCENWLGRRVM  428 (474)
Q Consensus       369 ~i~~~eq~~a~~G~~f~~~~~v~p~----~~R----~dc~y~--~~~am~vP~----------~~~~~~~~e~~~prr~~  428 (474)
                      .|+.+....|++|++++.+++++.+    .++    -|..-.  ......+|.          .+-|+. |-.+.|..+|
T Consensus       322 iI~~e~~~~MKpGAiLINvGr~d~Ei~i~aL~~~~~vdv~evep~v~~~~~~~g~~i~llaeGrlvNl~-~~~GhP~~vM  400 (476)
T PTZ00075        322 IITLEHMRRMKNNAIVGNIGHFDNEIQVAELEAYPGIEIVEIKPQVDRYTFPDGKGIILLAEGRLVNLG-CATGHPSFVM  400 (476)
T ss_pred             ccCHHHHhccCCCcEEEEcCCCchHHhHHHHHhcCCceeecccCCCCeEEeCCCCEEEEEeCCCccccC-CCCCCCeeEe
Confidence            6888999999999999999997633    122    111211  111122442          356677 8889999999


Q ss_pred             HHHHHhhhhhhhcCCCCCc
Q 011973          429 SAWRIAGIIHALEGWDLNE  447 (474)
Q Consensus       429 ~Ac~a~~~v~alEgw~~~e  447 (474)
                      +--++-=.+-.++=|..++
T Consensus       401 d~sfa~Q~la~~~l~~~~~  419 (476)
T PTZ00075        401 SNSFTNQVLAQIELWENRD  419 (476)
T ss_pred             eHHHHHHHHHHHHHHhccC
Confidence            9988877777777765544

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=94.53  E-value=0.055  Score=54.43  Aligned_cols=44  Identities=18%  Similarity=0.183  Sum_probs=39.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+.+.+++.
T Consensus         6 ~k~vlVTGas~--gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~   51 (322)
T PRK07453          6 KGTVIITGASS--GVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELG   51 (322)
T ss_pred             CCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh
Confidence            46799999998  9999999999999999988  88888888877763

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.48  E-value=0.11  Score=52.46  Aligned_cols=120  Identities=18%  Similarity=0.175  Sum_probs=70.3

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCccccccceeeeccc
Q 011973          280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY  356 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~-v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~  356 (474)
                      |||-....+.--..++. .++|+|.||-|   .|||++.+|.+.|++ +.+  |+.++-++|.+++.......      .
T Consensus       105 TD~~Gf~~~L~~~~~~~-~~~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~~~~------~  174 (272)
T PRK12550        105 TDYIAIAKLLASYQVPP-DLVVALRGSGG---MAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEWRPD------L  174 (272)
T ss_pred             cCHHHHHHHHHhcCCCC-CCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcchhh------c
Confidence            66766665553334433 35899999976   789999999998975 777  99999999988753221100      0


Q ss_pred             ccCceeEEE----EcCc--C----ChhhhhcCCCCceeecccccCcc-----CCC-CCeeeecCCcccc
Q 011973          357 AAHKTKIWL----VGDD--L----TGKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  409 (474)
Q Consensus       357 ~~~~~~vwi----vg~~--i----~~~eq~~a~~G~~f~~~~~v~p~-----~~R-~dc~y~~~~am~v  409 (474)
                      ....++++|    +|-.  .    .|-+....+++..++|+.--|++     +.| +-|.+..+..|-+
T Consensus       175 ~~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~~T~ll~~A~~~G~~~i~Gl~MLi  243 (272)
T PRK12550        175 GGIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPAETPLIRYARARGKTVITGAEVIA  243 (272)
T ss_pred             ccccCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecCCccCHHHHHHHHCcCeEeCCHHHHH
Confidence            001345555    2211  0    01122234677777777733332     122 5566666666644

>PRK07035 short chain dehydrogenase; Provisional

Probab=94.47  E-value=0.057  Score=51.69  Aligned_cols=44  Identities=23%  Similarity=0.228  Sum_probs=38.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |+.++.+.+.+++.
T Consensus         8 ~k~vlItGas~--gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~   53 (252)
T PRK07035          8 GKIALVTGASR--GIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIV   53 (252)
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888877754

>PRK12939 short chain dehydrogenase; Provisional

Probab=94.47  E-value=0.062  Score=50.92  Aligned_cols=43  Identities=21%  Similarity=0.265  Sum_probs=37.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+.+.+++
T Consensus         7 ~~~vlItGa~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~   51 (250)
T PRK12939          7 GKRALVTGAAR--GLGAAFAEALAEAGATVAFNDGLAAEARELAAAL   51 (250)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence            47899999998  9999999999999999888  7888777776664

>PRK06138 short chain dehydrogenase; Provisional

Probab=94.45  E-value=0.079  Score=50.37  Aligned_cols=44  Identities=16%  Similarity=0.231  Sum_probs=38.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.++++|++|  .||+++|+.|.++|.+|.+  |+.++.+.+.+++.
T Consensus         5 ~k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~   50 (252)
T PRK06138          5 GRVAIVTGAGS--GIGRATAKLFAREGARVVVADRDAEAAERVAAAIA   50 (252)
T ss_pred             CcEEEEeCCCc--hHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh
Confidence            46899999998  9999999999999999988  88888777776653

>PRK08263 short chain dehydrogenase; Provisional

Probab=94.43  E-value=0.07  Score=52.19  Aligned_cols=43  Identities=12%  Similarity=0.079  Sum_probs=38.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +.|+++|++|  -||+++|+.|.++|.+|.+  |+.++++++++++.
T Consensus         4 k~vlItGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~   48 (275)
T PRK08263          4 KVWFITGASR--GFGRAWTEAALERGDRVVATARDTATLADLAEKYG   48 (275)
T ss_pred             CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcc
Confidence            5799999998  9999999999999999888  88888888877653

>PRK06172 short chain dehydrogenase; Provisional

Probab=94.42  E-value=0.058  Score=51.67  Aligned_cols=43  Identities=21%  Similarity=0.170  Sum_probs=37.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++
T Consensus         7 ~k~ilItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~   51 (253)
T PRK06172          7 GKVALVTGGAA--GIGRATALAFAREGAKVVVADRDAAGGEETVALI   51 (253)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence            46899999998  9999999999999999988  8888877776664

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=94.38  E-value=0.074  Score=50.26  Aligned_cols=44  Identities=18%  Similarity=0.229  Sum_probs=37.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|+++|..|.+  |+.++++.+.++++
T Consensus         6 ~~~vlItGa~g--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~   51 (245)
T PRK12936          6 GRKALVTGASG--GIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELG   51 (245)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence            46899999998  9999999999999999887  77778877766553

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=94.38  E-value=0.072  Score=52.89  Aligned_cols=34  Identities=24%  Similarity=0.204  Sum_probs=30.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      ++|+|+|++|  -||+.+++.|.++|.+|..  |+.++
T Consensus         5 ~~ilVtGatG--fIG~~l~~~L~~~g~~V~~~~r~~~~   40 (322)
T PLN02662          5 KVVCVTGASG--YIASWLVKLLLQRGYTVKATVRDPND   40 (322)
T ss_pred             CEEEEECChH--HHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence            6899999999  9999999999999999876  66554

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=94.38  E-value=0.063  Score=51.62  Aligned_cols=43  Identities=16%  Similarity=0.231  Sum_probs=36.9

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+.+.+++.
T Consensus         3 k~ilItG~~~--~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~   47 (259)
T PRK12384          3 QVAVVIGGGQ--TLGAFLCHGLAEEGYRVAVADINSEKAANVAQEIN   47 (259)
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            5799999998  9999999999999999988  78777777766643

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=94.37  E-value=0.097  Score=50.64  Aligned_cols=43  Identities=19%  Similarity=0.255  Sum_probs=37.4

Q ss_pred             EEEEeccCCCchhHHHHHHHHhc----cCcEEEe--cchhhHHHHHhhCcc
Q 011973          300 HVLLRGTVTANKVANAVASSLCQ----MGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~----~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .|+++|+++  -||+++|+.|++    .|.+|.+  |++++++.+++++..
T Consensus         2 ~vlItGas~--GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~   50 (256)
T TIGR01500         2 VCLVTGASR--GFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGA   50 (256)
T ss_pred             EEEEecCCC--chHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHh
Confidence            588999997  999999999996    7999888  899999988877643

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.36  E-value=0.15  Score=51.95  Aligned_cols=125  Identities=16%  Similarity=0.182  Sum_probs=71.9

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cch---hhHHHHHhhCccccccceeee
Q 011973          280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICK---DDYEKLKLRIPVEAQHNLVLS  353 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~---~~~~~l~~~~~~~~~~~l~~~  353 (474)
                      |||--...+.--..+....++|+|.||-|  . ||||+..|++.|+ ++++  |+.   ++.++|.+++....... +..
T Consensus       106 TD~~Gf~~~l~~~~~~~~~k~vlvlGaGG--a-arAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~-~~~  181 (288)
T PRK12749        106 TDGTGHIRAIKESGFDIKGKTMVLLGAGG--A-STAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCV-VTV  181 (288)
T ss_pred             cCHHHHHHHHHhcCCCcCCCEEEEECCcH--H-HHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCce-EEE
Confidence            66666655554334444456899999987  3 8999999998887 5666  773   58888888765433221 111


Q ss_pred             ccc------c-c-CceeEEE----EcCcC--C---hhhhhcCCCCceeecccccCcc------CCC-CCeeeecCCcccc
Q 011973          354 TSY------A-A-HKTKIWL----VGDDL--T---GKEQARAPKGTIFIPYTQIPPR------KLR-KDCFYHSTPAMII  409 (474)
Q Consensus       354 t~~------~-~-~~~~vwi----vg~~i--~---~~eq~~a~~G~~f~~~~~v~p~------~~R-~dc~y~~~~am~v  409 (474)
                      .++      + + .+++++|    +|-.=  +   +.+....+++.++.|+. ..|.      ..| +-|....+..|-+
T Consensus       182 ~~~~~~~~l~~~~~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v-Y~P~~T~ll~~A~~~G~~~~~Gl~ML~  260 (288)
T PRK12749        182 TDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECV-YNPHMTKLLQQAQQAGCKTIDGYGMLL  260 (288)
T ss_pred             echhhhhhhhhhcccCCEEEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEec-CCCccCHHHHHHHHCCCeEECCHHHHH
Confidence            122      1 2 3567777    33210  0   01222346677777776 4433      112 4566666666543

>PRK08177 short chain dehydrogenase; Provisional

Probab=94.36  E-value=0.061  Score=50.93  Aligned_cols=40  Identities=15%  Similarity=0.183  Sum_probs=34.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      +.|+++|++|  .||+++|+.|+++|.+|++  |+.++.+.+++
T Consensus         2 k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~   43 (225)
T PRK08177          2 RTALIIGASR--GLGLGLVDRLLERGWQVTATVRGPQQDTALQA   43 (225)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh
Confidence            5799999998  9999999999999999998  77776666543

>PRK07832 short chain dehydrogenase; Provisional

Probab=94.35  E-value=0.061  Score=52.50  Aligned_cols=43  Identities=14%  Similarity=0.161  Sum_probs=36.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +.++++|++|  -||+++|+.|+++|.+|.+  |+.+.++++.+++.
T Consensus         1 k~vlItGas~--giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~   45 (272)
T PRK07832          1 KRCFVTGAAS--GIGRATALRLAAQGAELFLTDRDADGLAQTVADAR   45 (272)
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            3689999998  9999999999999999888  78888777766643

>PRK07677 short chain dehydrogenase; Provisional

Probab=94.34  E-value=0.062  Score=51.66  Aligned_cols=43  Identities=26%  Similarity=0.392  Sum_probs=37.9

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +.++++|++|  -||+++|+.|+++|.+|.+  |+.++.+++++++.
T Consensus         2 k~~lItG~s~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~   46 (252)
T PRK07677          2 KVVIITGGSS--GMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIE   46 (252)
T ss_pred             CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            5789999998  9999999999999999988  88888888877654

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.31  E-value=0.063  Score=51.38  Aligned_cols=43  Identities=19%  Similarity=0.317  Sum_probs=37.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.|+|+|++|  -||+++|+.|.++|.+|.+  |++++.+++.+++
T Consensus         7 ~~~vlItGasg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~   51 (262)
T PRK13394          7 GKTAVVTGAAS--GIGKEIALELARAGAAVAIADLNQDGANAVADEI   51 (262)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Confidence            46899999998  9999999999999999988  8887787777664

>PRK06125 short chain dehydrogenase; Provisional

Probab=94.31  E-value=0.07  Score=51.52  Aligned_cols=45  Identities=20%  Similarity=0.265  Sum_probs=39.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++++++..
T Consensus         7 ~k~vlItG~~~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   53 (259)
T PRK06125          7 GKRVLITGASK--GIGAAAAEAFAAEGCHLHLVARDADALEALAADLRA   53 (259)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh
Confidence            47899999998  9999999999999999988  888888887776543

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=94.30  E-value=0.057  Score=51.62  Aligned_cols=45  Identities=16%  Similarity=0.200  Sum_probs=38.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus        11 ~~k~vlItG~~g--~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~   57 (247)
T PRK08945         11 KDRIILVTGAGD--GIGREAALTYARHGATVILLGRTEEKLEAVYDEIE   57 (247)
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHH
Confidence            456899999998  9999999999999999988  88887777766654

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=94.30  E-value=0.18  Score=51.27  Aligned_cols=62  Identities=21%  Similarity=0.162  Sum_probs=46.1

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCcc
Q 011973          280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~-v~l--~~~~~~~~l~~~~~~  344 (474)
                      |||--...+.--+..+...++|+|.||-|   .|||++-.|++.|++ +.+  |+.+|-++|.+++..
T Consensus       109 TD~~Gf~~~L~~~~~~~~~k~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~  173 (283)
T PRK14027        109 TDVSGFGRGMEEGLPNAKLDSVVQVGAGG---VGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN  173 (283)
T ss_pred             CCHHHHHHHHHhcCcCcCCCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence            66766666653222233457899999986   789999999999974 555  899999999887643

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.29  E-value=0.075  Score=50.22  Aligned_cols=44  Identities=18%  Similarity=0.217  Sum_probs=37.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  .||+++|+.|+++|.+|.+  |+.++.+.+.+++.
T Consensus         5 ~~~vlItGa~g--~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   50 (238)
T PRK05786          5 GKKVAIIGVSE--GLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLS   50 (238)
T ss_pred             CcEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            35899999998  9999999999999999998  88888887765543

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.29  E-value=0.066  Score=51.66  Aligned_cols=44  Identities=14%  Similarity=0.220  Sum_probs=36.1

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      ...+.|+++|++|  -||+++|+.|+++|.+|.+  |+ ++.+++++++
T Consensus        13 l~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~   58 (258)
T PRK06935         13 LDGKVAIVTGGNT--GLGQGYAVALAKAGADIIITTHG-TNWDETRRLI   58 (258)
T ss_pred             CCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHH
Confidence            3457899999998  9999999999999999988  55 5566665554

>PRK05599 hypothetical protein; Provisional

Probab=94.28  E-value=0.059  Score=52.11  Aligned_cols=42  Identities=21%  Similarity=0.369  Sum_probs=37.0

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .|+++|+++  -||+++|+.|++ |.+|.+  |++++++++.+++.+
T Consensus         2 ~vlItGas~--GIG~aia~~l~~-g~~Vil~~r~~~~~~~~~~~l~~   45 (246)
T PRK05599          2 SILILGGTS--DIAGEIATLLCH-GEDVVLAARRPEAAQGLASDLRQ   45 (246)
T ss_pred             eEEEEeCcc--HHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHh
Confidence            589999997  999999999995 999999  999999998887643

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=94.20  E-value=0.068  Score=52.16  Aligned_cols=44  Identities=23%  Similarity=0.256  Sum_probs=38.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus        10 ~k~vlVtGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   55 (278)
T PRK08277         10 GKVAVITGGGG--VLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIK   55 (278)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888877754

>PRK05693 short chain dehydrogenase; Provisional

Probab=94.19  E-value=0.077  Score=51.74  Aligned_cols=41  Identities=24%  Similarity=0.306  Sum_probs=35.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      +.|+++|++|  -||+++|+.|+++|.+|++  |+.++.+.++.+
T Consensus         2 k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~   44 (274)
T PRK05693          2 PVVLITGCSS--GIGRALADAFKAAGYEVWATARKAEDVEALAAA   44 (274)
T ss_pred             CEEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC
Confidence            4789999998  9999999999999999988  888887777543

>PRK08589 short chain dehydrogenase; Validated

Probab=94.18  E-value=0.068  Score=52.36  Aligned_cols=43  Identities=23%  Similarity=0.278  Sum_probs=36.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|+++  -||+++|+.|+++|.+|.+  |+ ++.+++.+++.
T Consensus         6 ~k~vlItGas~--gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~   50 (272)
T PRK08589          6 NKVAVITGAST--GIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIK   50 (272)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHH
Confidence            46899999998  9999999999999999998  77 77777766653

>PRK06914 short chain dehydrogenase; Provisional

Probab=94.16  E-value=0.083  Score=51.51  Aligned_cols=42  Identities=14%  Similarity=0.135  Sum_probs=36.8

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      +.|+++|++|  -||+++|+.|.++|.+|.+  |+.++.+.+++++
T Consensus         4 k~~lItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~   47 (280)
T PRK06914          4 KIAIVTGASS--GFGLLTTLELAKKGYLVIATMRNPEKQENLLSQA   47 (280)
T ss_pred             CEEEEECCCc--hHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH
Confidence            5689999998  9999999999999999988  8888887776653

>PRK05650 short chain dehydrogenase; Provisional

Probab=94.13  E-value=0.071  Score=51.91  Aligned_cols=41  Identities=17%  Similarity=0.296  Sum_probs=36.1

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      +|+++|++|  -||+++|+.|+++|.+|++  |+.++++.+.+++
T Consensus         2 ~vlVtGasg--gIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l   44 (270)
T PRK05650          2 RVMITGAAS--GLGRAIALRWAREGWRLALADVNEEGGEETLKLL   44 (270)
T ss_pred             EEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            689999998  9999999999999999988  8888877766654

>PRK06953 short chain dehydrogenase; Provisional

Probab=94.13  E-value=0.078  Score=50.07  Aligned_cols=40  Identities=15%  Similarity=0.161  Sum_probs=35.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.++++.
T Consensus         2 ~~vlvtG~sg--~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~   43 (222)
T PRK06953          2 KTVLIVGASR--GIGREFVRQYRADGWRVIATARDAAALAALQA   43 (222)
T ss_pred             ceEEEEcCCC--chhHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            4689999998  9999999999999999988  77777777664

>PRK07814 short chain dehydrogenase; Provisional

Probab=94.11  E-value=0.08  Score=51.42  Aligned_cols=45  Identities=13%  Similarity=0.231  Sum_probs=38.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+++|++|  -||+++|++|.++|.+|.+  |+.++++++.+++.
T Consensus         9 ~~~~vlItGasg--gIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~   55 (263)
T PRK07814          9 DDQVAVVTGAGR--GLGAAIALAFAEAGADVLIAARTESQLDEVAEQIR   55 (263)
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            456899999998  9999999999999999988  88888887776653

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=94.11  E-value=0.17  Score=55.77  Aligned_cols=181  Identities=15%  Similarity=0.149  Sum_probs=106.9

Q ss_pred             HHHcCCcEEEecccc------------ccccccccCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEeccCC
Q 011973          241 ADAKGVKVISLGLLN------------QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT  308 (474)
Q Consensus       241 A~k~G~kV~~LG~ln------------~~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~~ip~~~~~V~l~Gatg  308 (474)
                      ..++|+.++++=.+.            ++-++.|+..+..+-|  .|.-++ +|.+-++.    .+|  .++|+|.|+- 
T Consensus       104 l~~k~it~ia~E~vprisraq~~d~lssma~iAGy~Avi~Aa~--~lgr~~-~g~~taag----~vp--~akVlViGaG-  173 (511)
T TIGR00561       104 LAAKNITVLAMDAVPRISRAQKLDALSSMANIAGYRAIIEAAH--EFGRFF-TGQITAAG----KVP--PAKVLVIGAG-  173 (511)
T ss_pred             HHHcCCEEEEeecccccccCCccCcchhhHHHHHHHHHHHHHH--Hhhhhc-CCceecCC----CCC--CCEEEEECCC-
Confidence            356778888876443            3445666655444433  033333 56554332    444  4899999985 


Q ss_pred             CchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc------------ccceeeec-c--------cc-c-CceeE
Q 011973          309 ANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA------------QHNLVLST-S--------YA-A-HKTKI  363 (474)
Q Consensus       309 ~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~------------~~~l~~~t-~--------~~-~-~~~~v  363 (474)
                        -+|.+.+..+...|.+|..  ++.++++..++ ++.+.            ..+-...+ .        +. . +.+||
T Consensus       174 --~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DI  250 (511)
T TIGR00561       174 --VAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDI  250 (511)
T ss_pred             --HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHHHHHHhCCCCE
Confidence              8999999999999998887  77778777665 33322            01100011 1        11 1 45677


Q ss_pred             EE--E---cC----cCChhhhhcCCCCceeecccccCcc----CCCCCeeeecCCccccCCCCccccccccccCcc---h
Q 011973          364 WL--V---GD----DLTGKEQARAPKGTIFIPYTQIPPR----KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR---V  427 (474)
Q Consensus       364 wi--v---g~----~i~~~eq~~a~~G~~f~~~~~v~p~----~~R~dc~y~~~~am~vP~~~~~~~~~e~~~prr---~  427 (474)
                      +|  +   |+    .++.++++.+++|.+++|++ .++-    -.|.+-+|.+.      +.+.  +.|--.+|.+   +
T Consensus       251 VI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA-~d~GGn~E~t~p~~~~~~~------~GV~--~~gv~nlPs~~p~~  321 (511)
T TIGR00561       251 IITTALIPGKPAPKLITEEMVDSMKAGSVIVDLA-AEQGGNCEYTKPGEVYTTE------NQVK--VIGYTDLPSRLPTQ  321 (511)
T ss_pred             EEECcccCCCCCCeeehHHHHhhCCCCCEEEEee-eCCCCCEEEecCceEEEec------CCEE--EEeeCCccccCHHH
Confidence            66  3   43    38999999999999999999 6654    22333333221      1122  3355566665   3


Q ss_pred             hHHHHHhhhhhhhcCC
Q 011973          428 MSAWRIAGIIHALEGW  443 (474)
Q Consensus       428 ~~Ac~a~~~v~alEgw  443 (474)
                      .+--.+..++.-|+.-
T Consensus       322 AS~l~s~nl~~~l~~l  337 (511)
T TIGR00561       322 SSQLYGTNLVNLLKLL  337 (511)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            3335566666555553

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK07806 short chain dehydrogenase; Provisional

Probab=94.09  E-value=0.12  Score=49.30  Aligned_cols=43  Identities=21%  Similarity=0.224  Sum_probs=34.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~-~~~~~l~~~~  342 (474)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |+. ++.+.+.+++
T Consensus         6 ~k~vlItGasg--giG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l   51 (248)
T PRK07806          6 GKTALVTGSSR--GIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEI   51 (248)
T ss_pred             CcEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHH
Confidence            36799999998  9999999999999999877  654 4566665554

>PRK09242 tropinone reductase; Provisional

Probab=94.07  E-value=0.076  Score=51.08  Aligned_cols=44  Identities=16%  Similarity=0.228  Sum_probs=38.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.++++|++|  -||+++|+.|+++|.+|++  |+.++.+++.+++.
T Consensus         9 ~k~~lItGa~~--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~   54 (257)
T PRK09242          9 GQTALITGASK--GIGLAIAREFLGLGADVLIVARDADALAQARDELA   54 (257)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999988  88888888877643

>PRK07060 short chain dehydrogenase; Provisional

Probab=94.03  E-value=0.11  Score=49.21  Aligned_cols=45  Identities=22%  Similarity=0.285  Sum_probs=38.7

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      ...+.++++|++|  -||+++|+.|.++|.+|.+  |+.++.+++.++.
T Consensus         7 ~~~~~~lItGa~g--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~   53 (245)
T PRK07060          7 FSGKSVLVTGASS--GIGRACAVALAQRGARVVAAARNAAALDRLAGET   53 (245)
T ss_pred             cCCCEEEEeCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            3456899999998  9999999999999999988  8888888777664

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=94.03  E-value=0.055  Score=55.66  Aligned_cols=68  Identities=19%  Similarity=0.315  Sum_probs=46.5

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcccc---ccceeeeccccc-CceeEEEE
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA---QHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~~---~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      |...+|.++|| |  .||+++|..|+.+++  ++.|  +++++++-...++..-.   ....+..++|++ ++++|+|+
T Consensus         4 ~~~~ki~iiGa-G--~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIi   79 (315)
T PRK00066          4 KQHNKVVLVGD-G--AVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVI   79 (315)
T ss_pred             CCCCEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEE
Confidence            34469999999 8  999999999998888  5666  67777765555533221   111233345666 88888775

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=94.02  E-value=0.16  Score=52.33  Aligned_cols=88  Identities=15%  Similarity=0.052  Sum_probs=61.2

Q ss_pred             cCCCcEEEEeccCCCchhHHHHHHHHh-ccCc-EEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEcC
Q 011973          295 PKTTAHVLLRGTVTANKVANAVASSLC-QMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGD  368 (474)
Q Consensus       295 p~~~~~V~l~Gatg~~kig~ava~~L~-~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg~  368 (474)
                      +++.++|.++|+-   ..|++.+++|+ .+++ +|.+  |+.++.+++.+++..+.+.......+.+ + ++++|++.-.
T Consensus       126 ~~~~~~v~iiGaG---~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT  202 (326)
T TIGR02992       126 REDSSVVAIFGAG---MQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTT  202 (326)
T ss_pred             CCCCcEEEEECCC---HHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEec
Confidence            5677899999996   69999999998 4664 4666  9999999999887554333322223444 3 7788877222


Q ss_pred             -----cCChhhhhcCCCCceeeccc
Q 011973          369 -----DLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       369 -----~i~~~eq~~a~~G~~f~~~~  388 (474)
                           .++++.   .++|+++..+.
T Consensus       203 ~s~~p~i~~~~---l~~g~~i~~vg  224 (326)
T TIGR02992       203 PSETPILHAEW---LEPGQHVTAMG  224 (326)
T ss_pred             CCCCcEecHHH---cCCCcEEEeeC
Confidence                 234444   48999988775

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=93.98  E-value=0.15  Score=51.79  Aligned_cols=42  Identities=14%  Similarity=0.107  Sum_probs=33.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccC--cEEEe--cchhhHHHHHhhC
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~--v~v~l--~~~~~~~~l~~~~  342 (474)
                      +.|+|+|++|  -||+++++.|+++|  .+|.+  |+..+.+.+++++
T Consensus         5 k~vLVTGatG--~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~   50 (324)
T TIGR03589         5 KSILITGGTG--SFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF   50 (324)
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh
Confidence            5799999999  99999999999876  67776  6655555665554

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=93.98  E-value=0.055  Score=55.25  Aligned_cols=44  Identities=20%  Similarity=0.301  Sum_probs=37.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      ..+-|+++||++  =||.++|..|+++|.++.+  |..+|++.+++++
T Consensus        11 ~~kvVvITGASs--GIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l   56 (282)
T KOG1205|consen   11 AGKVVLITGASS--GIGEALAYELAKRGAKLVLVARRARRLERVAEEL   56 (282)
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHH
Confidence            356789999995  9999999999999999777  8888888886663

>PRK07069 short chain dehydrogenase; Validated

Probab=93.97  E-value=0.12  Score=49.11  Aligned_cols=41  Identities=20%  Similarity=0.331  Sum_probs=35.4

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCc
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIP  343 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~-~~~~~~l~~~~~  343 (474)
                      |+++|++|  -||+++|+.|+++|.+|.+  |+ .++++.+++++.
T Consensus         2 ilVtG~~~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~   45 (251)
T PRK07069          2 AFITGAAG--GLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEIN   45 (251)
T ss_pred             EEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHH
Confidence            79999998  9999999999999999988  66 677777776654

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=93.97  E-value=0.089  Score=53.16  Aligned_cols=44  Identities=16%  Similarity=0.117  Sum_probs=38.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|+++  -||+++|+.|+++| .+|.+  |+.++.+++++++.
T Consensus         3 ~k~vlITGas~--GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~   49 (314)
T TIGR01289         3 KPTVIITGASS--GLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG   49 (314)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence            45889999997  99999999999999 99988  88888888887764

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.96  E-value=0.086  Score=53.92  Aligned_cols=91  Identities=19%  Similarity=0.240  Sum_probs=62.1

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973          285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  358 (474)
Q Consensus       285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~  358 (474)
                      -|++.|++=+     +-.-++|.++|..|  -+|+.+|..|.++|..|++ .++.+                    +.++
T Consensus       140 cTp~avi~lL~~~~i~l~Gk~v~vIG~S~--ivG~Pla~lL~~~gatVtv~~s~t~--------------------~l~~  197 (284)
T PRK14179        140 CTPAGIMEMFREYNVELEGKHAVVIGRSN--IVGKPMAQLLLDKNATVTLTHSRTR--------------------NLAE  197 (284)
T ss_pred             CCHHHHHHHHHHhCCCCCCCEEEEECCCC--cCcHHHHHHHHHCCCEEEEECCCCC--------------------CHHH
Confidence            3666666544     44678999999998  9999999999999999999 22111                    1111


Q ss_pred             --CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCeee
Q 011973          359 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY  401 (474)
Q Consensus       359 --~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~y  401 (474)
                        ++++|+|  +|  +.++++   +.++|+++||++ +.+.   ++.-|+-+
T Consensus       198 ~~~~ADIVI~avg~~~~v~~~---~ik~GavVIDvg-in~~~~gkl~GDVdf  245 (284)
T PRK14179        198 VARKADILVVAIGRGHFVTKE---FVKEGAVVIDVG-MNRDENGKLIGDVDF  245 (284)
T ss_pred             HHhhCCEEEEecCccccCCHH---HccCCcEEEEec-ceecCCCCeecCccH
Confidence              3555655  33  335544   369999999999 6662   44455553

>PLN02583 cinnamoyl-CoA reductase

Probab=93.92  E-value=0.18  Score=50.44  Aligned_cols=31  Identities=16%  Similarity=0.111  Sum_probs=28.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ..+.|+|+|++|  -||+++++.|.++|.+|..
T Consensus         5 ~~k~vlVTGatG--~IG~~lv~~Ll~~G~~V~~   35 (297)
T PLN02583          5 SSKSVCVMDASG--YVGFWLVKRLLSRGYTVHA   35 (297)
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence            356899999999  9999999999999999987

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=93.91  E-value=0.33  Score=52.28  Aligned_cols=138  Identities=15%  Similarity=0.159  Sum_probs=85.7

Q ss_pred             cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--Ec-
Q 011973          295 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VG-  367 (474)
Q Consensus       295 p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg-  367 (474)
                      ....++|+|+|. |  .||+.+|+.|...|.+|++  +++.+.......   +.  .   +.+.+ . ..++++|  .| 
T Consensus       209 ~l~Gk~VlViG~-G--~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~---G~--~---v~~l~eal~~aDVVI~aTG~  277 (425)
T PRK05476        209 LIAGKVVVVAGY-G--DVGKGCAQRLRGLGARVIVTEVDPICALQAAMD---GF--R---VMTMEEAAELGDIFVTATGN  277 (425)
T ss_pred             CCCCCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc---CC--E---ecCHHHHHhCCCEEEECCCC
Confidence            335679999997 5  9999999999999999999  454443222111   11  1   11332 2 5566766  33 


Q ss_pred             -CcCChhhhhcCCCCceeecccccCcc--------------CCCCCeeeecCCc---ccc--CCCCccccccccccCcch
Q 011973          368 -DDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCFYHSTPA---MII--PPSLSNMHSCENWLGRRV  427 (474)
Q Consensus       368 -~~i~~~eq~~a~~G~~f~~~~~v~p~--------------~~R~dc~y~~~~a---m~v--P~~~~~~~~~e~~~prr~  427 (474)
                       +.++.+....+++|++++-+..++.+              +.|+.+.-...|.   +.+  -+..-|+- |..+.|..+
T Consensus       278 ~~vI~~~~~~~mK~GailiNvG~~d~Eid~~~L~~~~~~~~~v~~~v~~y~~~~g~~i~lLa~GrlvNl~-~~~ghp~~v  356 (425)
T PRK05476        278 KDVITAEHMEAMKDGAILANIGHFDNEIDVAALEELAVKWREIKPQVDEYTLPDGKRIILLAEGRLVNLG-AATGHPSEV  356 (425)
T ss_pred             HHHHHHHHHhcCCCCCEEEEcCCCCCccChHHHhhcCcceeecCCCceEEEeCCCCEEEEEeCCcccccC-CCCCCccee
Confidence             35777888899999999998876642              2233332111111   111  12355566 888999999


Q ss_pred             hHHHHHhhhhhhhcCCC
Q 011973          428 MSAWRIAGIIHALEGWD  444 (474)
Q Consensus       428 ~~Ac~a~~~v~alEgw~  444 (474)
                      |.--+|.=.+-+++=|.
T Consensus       357 md~sfa~q~l~~~~l~~  373 (425)
T PRK05476        357 MDMSFANQALAQIELFT  373 (425)
T ss_pred             eCHHHHHHHHHHHHHHh
Confidence            97766655555555554

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=93.91  E-value=0.11  Score=49.40  Aligned_cols=43  Identities=21%  Similarity=0.326  Sum_probs=37.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.++++|++|  -||+++|+.|.++|.+|.+  |+.++.+++.+++
T Consensus         3 ~~~ilItGas~--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~   47 (250)
T TIGR03206         3 DKTAIVTGGGG--GIGGATCRRFAEEGAKVAVFDLNREAAEKVAADI   47 (250)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHH
Confidence            46799999998  9999999999999999988  7887777776654

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PLN02650 dihydroflavonol-4-reductase

Probab=93.91  E-value=0.12  Score=52.42  Aligned_cols=42  Identities=17%  Similarity=0.163  Sum_probs=34.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      ..++|+|+|++|  -||+++++.|.++|.+|..  |+.++.+.++.
T Consensus         4 ~~k~iLVTGatG--fIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~   47 (351)
T PLN02650          4 QKETVCVTGASG--FIGSWLVMRLLERGYTVRATVRDPANVKKVKH   47 (351)
T ss_pred             CCCEEEEeCCcH--HHHHHHHHHHHHCCCEEEEEEcCcchhHHHHH
Confidence            356899999999  9999999999999999976  76665555543

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=93.89  E-value=0.17  Score=46.41  Aligned_cols=39  Identities=18%  Similarity=0.224  Sum_probs=35.8

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      +|.++|+-   ..|.|+|..|+++|.+|+|  |+++..+.|++.
T Consensus         1 KI~ViGaG---~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~   41 (157)
T PF01210_consen    1 KIAVIGAG---NWGTALAALLADNGHEVTLWGRDEEQIEEINET   41 (157)
T ss_dssp             EEEEESSS---HHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHH
T ss_pred             CEEEECcC---HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence            58899987   8999999999999999999  888999999876

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.88  E-value=0.089  Score=49.94  Aligned_cols=43  Identities=19%  Similarity=0.339  Sum_probs=37.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+.+.+++
T Consensus         7 ~~~vlVtG~sg--~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~   51 (239)
T PRK07666          7 GKNALITGAGR--GIGRAVAIALAKEGVNVGLLARTEENLKAVAEEV   51 (239)
T ss_pred             CCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            36799999998  9999999999999999988  8888877776664

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.88  E-value=0.098  Score=51.12  Aligned_cols=32  Identities=19%  Similarity=0.388  Sum_probs=27.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.|+++|+++++-||+++|+.|+++|.+|.+
T Consensus         6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~   37 (261)
T PRK08690          6 GKKILITGMISERSIAYGIAKACREQGAELAF   37 (261)
T ss_pred             CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEE
Confidence            35799999853347999999999999999988

>PRK07775 short chain dehydrogenase; Provisional

Probab=93.85  E-value=0.11  Score=51.07  Aligned_cols=44  Identities=25%  Similarity=0.288  Sum_probs=37.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      +.+.|+|+|++|  -||+++|+.|.++|.+|.+  |+.++.+++.+++
T Consensus         9 ~~~~vlVtGa~g--~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~   54 (274)
T PRK07775          9 DRRPALVAGASS--GIGAATAIELAAAGFPVALGARRVEKCEELVDKI   54 (274)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            346899999998  9999999999999999877  7777777766554

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.81  E-value=0.1  Score=48.91  Aligned_cols=42  Identities=21%  Similarity=0.251  Sum_probs=33.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR  341 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~  341 (474)
                      .++|+|+|++|  .||+++|+.|+++|.+|++   ++.++.+.+.++
T Consensus         6 ~~~vlItGasg--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~   50 (249)
T PRK12825          6 GRVALVTGAAR--GLGRAIALRLARAGADVVVHYRSDEEAAEELVEA   50 (249)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence            35899999999  9999999999999999876   445555555554

>PRK07904 short chain dehydrogenase; Provisional

Probab=93.80  E-value=0.084  Score=51.43  Aligned_cols=45  Identities=13%  Similarity=0.222  Sum_probs=36.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhh-HHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDD-YEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~-~~~l~~~~~~  344 (474)
                      .+.|+++|++|  -||+++|+.|+++| .+|.+  |+.++ ++++.+++..
T Consensus         8 ~~~vlItGas~--giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~   56 (253)
T PRK07904          8 PQTILLLGGTS--EIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKA   56 (253)
T ss_pred             CcEEEEEcCCc--HHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHh
Confidence            45799999998  99999999999885 89888  87775 7777766543

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.72  E-value=0.12  Score=50.24  Aligned_cols=47  Identities=17%  Similarity=0.224  Sum_probs=35.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~---~~~~l~~~~~  343 (474)
                      ..+.|+++|+++|+-||+++|+.|+++|.+|.+  |+.+   +.++++++++
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~   60 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELD   60 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhc
Confidence            457899999983236999999999999999988  6543   3455555543

>PLN00198 anthocyanidin reductase; Provisional

Probab=93.72  E-value=0.17  Score=51.15  Aligned_cols=42  Identities=21%  Similarity=0.184  Sum_probs=34.2

Q ss_pred             CcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHH
Q 011973          294 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  337 (474)
Q Consensus       294 ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~  337 (474)
                      .|...++|+++|++|  -||+.+++.|.++|.+|..  |+.+....
T Consensus         5 ~~~~~~~vlItG~~G--fIG~~l~~~L~~~g~~V~~~~r~~~~~~~   48 (338)
T PLN00198          5 TPTGKKTACVIGGTG--FLASLLIKLLLQKGYAVNTTVRDPENQKK   48 (338)
T ss_pred             cCCCCCeEEEECCch--HHHHHHHHHHHHCCCEEEEEECCCCCHHH
Confidence            366678899999999  9999999999999999854  66554443

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.71  E-value=0.12  Score=49.17  Aligned_cols=44  Identities=23%  Similarity=0.323  Sum_probs=36.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~  343 (474)
                      .+.++++|++|  -||+++|+.|+++|.+|.+   +++++.+.+.++++
T Consensus         5 ~k~ilItGas~--gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~   51 (253)
T PRK08642          5 EQTVLVTGGSR--GLGAAIARAFAREGARVVVNYHQSEDAAEALADELG   51 (253)
T ss_pred             CCEEEEeCCCC--cHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Confidence            36799999998  9999999999999999976   45666777766553

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=93.71  E-value=0.12  Score=45.34  Aligned_cols=98  Identities=11%  Similarity=0.118  Sum_probs=53.9

Q ss_pred             EEEEeccCCCchhHHHHHHHHh-ccCcEEEe---cchhhHHHHHhhCccccccceeeeccc--cc-CceeEEE--EcCcC
Q 011973          300 HVLLRGTVTANKVANAVASSLC-QMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSY--AA-HKTKIWL--VGDDL  370 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~-~~~v~v~l---~~~~~~~~l~~~~~~~~~~~l~~~t~~--~~-~~~~vwi--vg~~i  370 (474)
                      +|+++||||  -+|+.+++.|. .....++.   ++++.-+.+....+.-.+..-+.+.+.  ++ .++++++  .++..
T Consensus         1 rV~IvGAtG--~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~   78 (121)
T PF01118_consen    1 RVAIVGATG--YVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGA   78 (121)
T ss_dssp             EEEEESTTS--HHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHH
T ss_pred             CEEEECCCC--HHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhH
Confidence            589999999  99999999999 55565554   333122333333321111111222222  23 7788876  33332


Q ss_pred             Chh-hhhcCCCCceeecccccCcc-CCCCCeeee
Q 011973          371 TGK-EQARAPKGTIFIPYTQIPPR-KLRKDCFYH  402 (474)
Q Consensus       371 ~~~-eq~~a~~G~~f~~~~~v~p~-~~R~dc~y~  402 (474)
                      ..+ ...-+++|..++|.|   .. .+.+||.|.
T Consensus        79 ~~~~~~~~~~~g~~ViD~s---~~~R~~~~~~~~  109 (121)
T PF01118_consen   79 SKELAPKLLKAGIKVIDLS---GDFRLDDDVPYG  109 (121)
T ss_dssp             HHHHHHHHHHTTSEEEESS---STTTTSTTSEEE
T ss_pred             HHHHHHHHhhCCcEEEeCC---HHHhCCCCCCEE
Confidence            222 222248999888887   22 333566664

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK08303 short chain dehydrogenase; Provisional

Probab=93.69  E-value=0.13  Score=52.10  Aligned_cols=44  Identities=16%  Similarity=0.172  Sum_probs=35.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc----------hhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC----------KDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~----------~~~~~~l~~~~~  343 (474)
                      .+.|+++|+++  -||+++|+.|+++|.+|.+  |+          +++.+++.+++.
T Consensus         8 ~k~~lITGgs~--GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~   63 (305)
T PRK08303          8 GKVALVAGATR--GAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVT   63 (305)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHH
Confidence            46899999997  8999999999999999988  65          356666666553

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.67  E-value=0.12  Score=51.12  Aligned_cols=35  Identities=20%  Similarity=0.258  Sum_probs=29.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  332 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~  332 (474)
                      .+.++|+|+++++-||+++|+.|+++|.+|.+  |++
T Consensus         7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~   43 (271)
T PRK06505          7 GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGE   43 (271)
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCch
Confidence            46799999994235999999999999999998  554

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=93.66  E-value=0.11  Score=50.07  Aligned_cols=44  Identities=16%  Similarity=0.251  Sum_probs=38.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.++.+  |+.++.+.+.+++
T Consensus        10 ~~k~vlVtG~s~--gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l   55 (255)
T PRK06113         10 DGKCAIITGAGA--GIGKEIAITFATAGASVVVSDINADAANHVVDEI   55 (255)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence            457899999998  9999999999999999988  7778777776664

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.64  E-value=0.11  Score=50.83  Aligned_cols=46  Identities=17%  Similarity=0.277  Sum_probs=35.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe-----cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT-----ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-----~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|+++++-||+|+|+.|+++|.+|.+     |++++++++.++++
T Consensus         6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~   56 (260)
T PRK06997          6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG   56 (260)
T ss_pred             CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC
Confidence            46899999753247999999999999999987     33566666666553

>PRK06181 short chain dehydrogenase; Provisional

Probab=93.64  E-value=0.096  Score=50.45  Aligned_cols=43  Identities=16%  Similarity=0.282  Sum_probs=36.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +.|+|+|++|  .||+++|+.|+++|.+|++  |+.++.+.+.+++.
T Consensus         2 ~~vlVtGasg--~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~   46 (263)
T PRK06181          2 KVVIITGASE--GIGRALAVRLARAGAQLVLAARNETRLASLAQELA   46 (263)
T ss_pred             CEEEEecCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            4689999998  9999999999999999998  77777776665543

>PRK08264 short chain dehydrogenase; Validated

Probab=93.64  E-value=0.094  Score=49.66  Aligned_cols=38  Identities=21%  Similarity=0.211  Sum_probs=32.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEK  337 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~  337 (474)
                      .+.|+++|++|  .||+++|+.|+++|. +|++  |+.++.++
T Consensus         6 ~~~vlItGgsg--~iG~~la~~l~~~G~~~V~~~~r~~~~~~~   46 (238)
T PRK08264          6 GKVVLVTGANR--GIGRAFVEQLLARGAAKVYAAARDPESVTD   46 (238)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCcccEEEEecChhhhhh
Confidence            46799999998  999999999999998 8888  76665543

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=93.63  E-value=0.1  Score=50.62  Aligned_cols=39  Identities=18%  Similarity=0.242  Sum_probs=33.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  338 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l  338 (474)
                      .++|+++||+|  .||+++++.|.++|.+|+.  |+.++.+.+
T Consensus        17 ~~~ilItGasG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~   57 (251)
T PLN00141         17 TKTVFVAGATG--RTGKRIVEQLLAKGFAVKAGVRDVDKAKTS   57 (251)
T ss_pred             CCeEEEECCCc--HHHHHHHHHHHhCCCEEEEEecCHHHHHHh
Confidence            56899999999  9999999999999999876  777766544

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.62  E-value=0.14  Score=52.35  Aligned_cols=91  Identities=21%  Similarity=0.257  Sum_probs=62.9

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973          285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  358 (474)
Q Consensus       285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~  358 (474)
                      -|+..|++=+     +-.-++|+|+|.+.  -||+-+|..|.++|-.|++ .++.  .                  ++++
T Consensus       140 cTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~atVt~chs~t--~------------------~l~~  197 (284)
T PRK14190        140 CTPHGILELLKEYNIDISGKHVVVVGRSN--IVGKPVGQLLLNENATVTYCHSKT--K------------------NLAE  197 (284)
T ss_pred             CCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEEeCCc--h------------------hHHH
Confidence            3666666533     44688999999998  9999999999999999998 2111  0                  1111


Q ss_pred             --CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCeee
Q 011973          359 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY  401 (474)
Q Consensus       359 --~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~y  401 (474)
                        +.+||+|  +|  ..++++..   ++|+++||+. +++.   ++--|+-+
T Consensus       198 ~~~~ADIvI~AvG~p~~i~~~~i---k~gavVIDvG-i~~~~~gkl~GDvd~  245 (284)
T PRK14190        198 LTKQADILIVAVGKPKLITADMV---KEGAVVIDVG-VNRLENGKLCGDVDF  245 (284)
T ss_pred             HHHhCCEEEEecCCCCcCCHHHc---CCCCEEEEee-ccccCCCCeeccCcH
Confidence              3555655  33  35777777   9999999998 6652   44455543

>PRK06484 short chain dehydrogenase; Validated

Probab=93.60  E-value=0.12  Score=55.40  Aligned_cols=46  Identities=17%  Similarity=0.184  Sum_probs=40.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.++++|+++  -||+++|+.|+++|.+|.+  |+++++++++++++.
T Consensus       268 ~~k~~lItGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~  315 (520)
T PRK06484        268 SPRVVAITGGAR--GIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGD  315 (520)
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence            356899999998  9999999999999999998  888999999887643

>PRK09134 short chain dehydrogenase; Provisional

Probab=93.55  E-value=0.19  Score=48.51  Aligned_cols=44  Identities=27%  Similarity=0.437  Sum_probs=35.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~  342 (474)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+   ++.++.+.+.+++
T Consensus         8 ~~k~vlItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~   54 (258)
T PRK09134          8 APRAALVTGAAR--RIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEI   54 (258)
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            346899999998  9999999999999999976   4556666666554

>PRK08291 ectoine utilization protein EutC; Validated

Probab=93.54  E-value=0.25  Score=50.98  Aligned_cols=88  Identities=11%  Similarity=0.033  Sum_probs=58.3

Q ss_pred             cCCCcEEEEeccCCCchhHHHHHHHHhc-cC-cEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE--
Q 011973          295 PKTTAHVLLRGTVTANKVANAVASSLCQ-MG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV--  366 (474)
Q Consensus       295 p~~~~~V~l~Gatg~~kig~ava~~L~~-~~-v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv--  366 (474)
                      +++.++|.++|+-   ..|++.+.+|+. ++ .+|.+  |++++.+.+.+++..+.+..+....+.+ + ++++++|.  
T Consensus       129 ~~~~~~v~IiGaG---~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al~~aDiVi~aT  205 (330)
T PRK08291        129 REDASRAAVIGAG---EQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHEAVAGADIIVTTT  205 (330)
T ss_pred             CCCCCEEEEECCC---HHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHHHHccCCEEEEee
Confidence            4567899999997   689999999983 55 45666  9999999999887554433322223444 3 67777662  


Q ss_pred             --cC-cCChhhhhcCCCCceeeccc
Q 011973          367 --GD-DLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       367 --g~-~i~~~eq~~a~~G~~f~~~~  388 (474)
                        .+ .++.+   +.++|+++..+.
T Consensus       206 ~s~~p~i~~~---~l~~g~~v~~vg  227 (330)
T PRK08291        206 PSEEPILKAE---WLHPGLHVTAMG  227 (330)
T ss_pred             CCCCcEecHH---HcCCCceEEeeC
Confidence              22 23332   347888877653

>PRK07576 short chain dehydrogenase; Provisional

Probab=93.54  E-value=0.11  Score=50.63  Aligned_cols=45  Identities=13%  Similarity=0.280  Sum_probs=38.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+.+.+++.
T Consensus         8 ~~k~ilItGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   54 (264)
T PRK07576          8 AGKNVVVVGGTS--GINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQ   54 (264)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            456899999998  9999999999999999988  88887777665543

>PRK08278 short chain dehydrogenase; Provisional

Probab=93.53  E-value=0.14  Score=50.25  Aligned_cols=34  Identities=12%  Similarity=0.221  Sum_probs=29.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |+.+
T Consensus         6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~   41 (273)
T PRK08278          6 GKTLFITGASR--GIGLAIALRAARDGANIVIAAKTAE   41 (273)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecccc
Confidence            36899999998  9999999999999999988  5543

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.51  E-value=0.21  Score=50.96  Aligned_cols=84  Identities=19%  Similarity=0.225  Sum_probs=57.8

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973          285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  358 (474)
Q Consensus       285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~  358 (474)
                      -|++.|++=+     +-.-++|.|+|...  -+|+.+|..|.++|-.|++ .++.  ++|++.+                
T Consensus       134 cTp~av~~ll~~~~i~l~Gk~V~ViGrs~--~vGrpla~lL~~~~atVtv~hs~t--~~L~~~~----------------  193 (279)
T PRK14178        134 CTPNGIMTLLHEYKISIAGKRAVVVGRSI--DVGRPMAALLLNADATVTICHSKT--ENLKAEL----------------  193 (279)
T ss_pred             CCHHHHHHHHHHcCCCCCCCEEEEECCCc--cccHHHHHHHHhCCCeeEEEecCh--hHHHHHH----------------
Confidence            3566665544     33578999999997  9999999999999999988 2111  1111110                


Q ss_pred             CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973          359 HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       359 ~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                      +++|++|  +|  +.++++..   ++|++++|++ ++.
T Consensus       194 ~~ADIvI~Avgk~~lv~~~~v---k~GavVIDVg-i~~  227 (279)
T PRK14178        194 RQADILVSAAGKAGFITPDMV---KPGATVIDVG-INQ  227 (279)
T ss_pred             hhCCEEEECCCcccccCHHHc---CCCcEEEEee-ccc
Confidence            3556655  44  44666665   9999999999 665

>PRK12827 short chain dehydrogenase; Provisional

Probab=93.51  E-value=0.19  Score=47.52  Aligned_cols=43  Identities=21%  Similarity=0.291  Sum_probs=34.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe------cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT------ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l------~~~~~~~~l~~~~  342 (474)
                      .+.++++|++|  -||+++|+.|+++|.+|.+      ++++..+.+.+++
T Consensus         6 ~~~ilItGasg--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~   54 (249)
T PRK12827          6 SRRVLITGGSG--GLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGI   54 (249)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHH
Confidence            36799999998  9999999999999999877      3455566665554

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=93.48  E-value=0.23  Score=46.60  Aligned_cols=86  Identities=16%  Similarity=0.130  Sum_probs=58.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------  366 (474)
                      ..++|.++|.-   .||+++|+.|..-|.+|..  |+.+.-+.....        -+...++++  +.++++++      
T Consensus        35 ~g~tvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~--------~~~~~~l~ell~~aDiv~~~~plt~  103 (178)
T PF02826_consen   35 RGKTVGIIGYG---RIGRAVARRLKAFGMRVIGYDRSPKPEEGADEF--------GVEYVSLDELLAQADIVSLHLPLTP  103 (178)
T ss_dssp             TTSEEEEESTS---HHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHT--------TEEESSHHHHHHH-SEEEE-SSSST
T ss_pred             CCCEEEEEEEc---CCcCeEeeeeecCCceeEEecccCChhhhcccc--------cceeeehhhhcchhhhhhhhhcccc
Confidence            57899999985   9999999999999999999  444322211111        011224433  55655441      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc---cCcc
Q 011973          367 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR  393 (474)
Q Consensus       367 --g~~i~~~eq~~a~~G~~f~~~~~---v~p~  393 (474)
                        -..|+.++..++|+|++|+-++|   |+.+
T Consensus       104 ~T~~li~~~~l~~mk~ga~lvN~aRG~~vde~  135 (178)
T PF02826_consen  104 ETRGLINAEFLAKMKPGAVLVNVARGELVDED  135 (178)
T ss_dssp             TTTTSBSHHHHHTSTTTEEEEESSSGGGB-HH
T ss_pred             ccceeeeeeeeeccccceEEEeccchhhhhhh
Confidence              35688899999999999999999   5554

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK06841 short chain dehydrogenase; Provisional

Probab=93.45  E-value=0.14  Score=48.98  Aligned_cols=36  Identities=19%  Similarity=0.306  Sum_probs=31.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      ..+.|+++|++|  .||+++|+.|+++|.+|.+  |+.+.
T Consensus        14 ~~k~vlItGas~--~IG~~la~~l~~~G~~Vi~~~r~~~~   51 (255)
T PRK06841         14 SGKVAVVTGGAS--GIGHAIAELFAAKGARVALLDRSEDV   51 (255)
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            356899999998  9999999999999999998  66553

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.44  E-value=0.14  Score=50.89  Aligned_cols=46  Identities=15%  Similarity=0.247  Sum_probs=35.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch---hhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~---~~~~~l~~~~~  343 (474)
                      .+.|+++|+++++-||+|+|+.|+++|.+|.+  |++   ++++++.++++
T Consensus         5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~   55 (274)
T PRK08415          5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG   55 (274)
T ss_pred             CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC
Confidence            36889999972236999999999999999998  663   45666655554

>PRK08219 short chain dehydrogenase; Provisional

Probab=93.33  E-value=0.12  Score=48.13  Aligned_cols=41  Identities=15%  Similarity=0.243  Sum_probs=35.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      +.|+|+|++|  .||+++|+.|+++ .+|..  |+.++.+.++++.
T Consensus         4 ~~vlVtG~~g--~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~   46 (227)
T PRK08219          4 PTALITGASR--GIGAAIARELAPT-HTLLLGGRPAERLDELAAEL   46 (227)
T ss_pred             CEEEEecCCc--HHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh
Confidence            5799999999  9999999999988 88877  8888877776554

>PF10520 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro: IPR019547 This entry represents part of the transcript of the fusion of two genes, the UEV1

Probab=93.33  E-value=0.057  Score=51.77  Aligned_cols=54  Identities=19%  Similarity=0.357  Sum_probs=38.6

Q ss_pred             HhhhccccceecccccccCCCceeeccCcchhhhhhhC-CCCCcccchhHHHHhcCCC
Q 011973           53 NNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTI  109 (474)
Q Consensus        53 ~~~gHsNve~~P~~l~~~~p~Lkyli~TP~~H~lHHs~-~~~NYg~~f~lWDrLFGT~  109 (474)
                      -.+.|.... .|.+.. .+.-.. ++.+|.+|..||.. +++|||....||+.+....
T Consensus       102 HkWsH~~~~-~P~~V~-~LQ~~g-illsr~~H~~HH~aPh~~~YCI~tGw~N~~Ld~~  156 (178)
T PF10520_consen  102 HKWSHTYKS-LPPWVR-FLQDAG-ILLSRKHHRIHHVAPHDTNYCITTGWLNPPLDKI  156 (178)
T ss_pred             HHHHcCCCC-CCHHHH-HHHHCC-cccCchhhhccccCcccCCeEeecccchHHHHHh
Confidence            346688666 365422 111112 34699999999999 9999999999999987765

UEV1 is an enzymatically inactive variant of the E2 ubiquitin-conjugating enzymes that regulate non-canonical elongation of ubiquitin chains, and Kua, an otherwise unknown gene. UEV1A is a nuclear protein, whereas both Kua and Kua-UEV localise to cytoplasmic structures, indicating that the addition of a Kua domain to UEV confers new biological properties. UEV1-Kua carries the B domain with its characteristic double histidine motif, and it is probably this domain which determines the cytoplasmic localisation. It is postulated that this hybrid transcript could preferentially direct the variant polyubiquitination of substrates closely associated with the cytoplasmic face of the endoplasmic reticulum, possibly, although not necessarily, in conjunction with membrane-bound ubiquitin-conjugating enzymes [].

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=93.32  E-value=0.12  Score=49.19  Aligned_cols=31  Identities=19%  Similarity=0.333  Sum_probs=28.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+
T Consensus         4 ~~k~vlItGas~--gIG~~ia~~l~~~G~~vi~   34 (248)
T TIGR01832         4 EGKVALVTGANT--GLGQGIAVGLAEAGADIVG   34 (248)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence            347899999998  9999999999999999998

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK00676 hemA glutamyl-tRNA reductase; Validated

Probab=93.29  E-value=0.14  Score=53.52  Aligned_cols=91  Identities=18%  Similarity=0.141  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHHHHcCCcEEEec-cccccccccccCceeeecCCCCcceeeecCChhHHHHHH---hcCc-CCCcEEEEe
Q 011973          230 INSLIEEAILEADAKGVKVISLG-LLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVV---NSLP-KTTAHVLLR  304 (474)
Q Consensus       230 in~~Ie~Ai~~A~k~G~kV~~LG-~ln~~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl---~~ip-~~~~~V~l~  304 (474)
                      |=-+|-+|...|.+.|.-=--|. +|++        .+.+.|.-. -+.++-.|..=.++++.   +..+ -..++|+|+
T Consensus       110 IlGQVK~Ay~~A~~~g~~g~~L~~lf~~--------A~~~aKrVR-teT~I~~~~vSv~s~av~~~~~~~~l~~k~vLvI  180 (338)
T PRK00676        110 IQGQVKRAYLKAARERKLPFALHFLFQK--------ALKEGKVFR-SKGGAPYAEVTIESVVQQELRRRQKSKKASLLFI  180 (338)
T ss_pred             HHHHHHHHHHHHHHcCCchHHHHHHHHH--------HHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHhCCccCCEEEEE
Confidence            44558899999999885311111 1122        223333322 22344334322222222   3332 257899999


Q ss_pred             ccCCCchhHHHHHHHHhccCcE-EEe--cch
Q 011973          305 GTVTANKVANAVASSLCQMGIK-VAT--ICK  332 (474)
Q Consensus       305 Gatg~~kig~ava~~L~~~~v~-v~l--~~~  332 (474)
                      |+ |  ++|+-+|++|.++|++ +++  |+.
T Consensus       181 Ga-G--em~~l~a~~L~~~g~~~i~v~nRt~  208 (338)
T PRK00676        181 GY-S--EINRKVAYYLQRQGYSRITFCSRQQ  208 (338)
T ss_pred             cc-c--HHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            99 5  9999999999999854 666  554

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=93.28  E-value=0.14  Score=49.88  Aligned_cols=43  Identities=16%  Similarity=0.296  Sum_probs=36.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~  343 (474)
                      ..|+++|+++  -||+++|+.|+++|.+|.+   +++++++.+.+++.
T Consensus         2 ~~~lITGas~--gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~   47 (267)
T TIGR02685         2 PAAVVTGAAK--RIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELN   47 (267)
T ss_pred             CEEEEeCCCC--cHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHH
Confidence            4689999998  8999999999999999988   45677877776664

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12743 oxidoreductase; Provisional

Probab=93.25  E-value=0.13  Score=49.58  Aligned_cols=43  Identities=12%  Similarity=0.168  Sum_probs=35.8

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~  343 (474)
                      +.|+++|++|  -||+++|+.|+++|.+|.+   +++++.+.+.+++.
T Consensus         3 k~vlItGas~--giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~   48 (256)
T PRK12743          3 QVAIVTASDS--GIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVR   48 (256)
T ss_pred             CEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH
Confidence            5799999998  9999999999999999977   46666777666643

>PLN02427 UDP-apiose/xylose synthase

Probab=93.23  E-value=0.24  Score=51.21  Aligned_cols=44  Identities=16%  Similarity=0.190  Sum_probs=34.1

Q ss_pred             CcCCCcEEEEeccCCCchhHHHHHHHHhcc-CcEEEe--cchhhHHHHH
Q 011973          294 LPKTTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLK  339 (474)
Q Consensus       294 ip~~~~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l--~~~~~~~~l~  339 (474)
                      -|-+..+|+|+|+||  =||+.+++.|.++ |.+|..  |+.++.+.+.
T Consensus        10 ~~~~~~~VlVTGgtG--fIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~   56 (386)
T PLN02427         10 KPIKPLTICMIGAGG--FIGSHLCEKLMTETPHKVLALDVYNDKIKHLL   56 (386)
T ss_pred             CcccCcEEEEECCcc--hHHHHHHHHHHhcCCCEEEEEecCchhhhhhh
Confidence            344566899999999  9999999999987 588876  5555555443

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.22  E-value=0.15  Score=49.88  Aligned_cols=46  Identities=17%  Similarity=0.232  Sum_probs=36.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c---chhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I---CKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~---~~~~~~~l~~~~~  343 (474)
                      .+.++++|+++++-||+++|+.|+++|.+|.+  |   ++++++++++++.
T Consensus         7 ~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~   57 (257)
T PRK08594          7 GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE   57 (257)
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC
Confidence            46889999971127999999999999999998  3   3467888877764

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=93.21  E-value=0.14  Score=52.41  Aligned_cols=47  Identities=13%  Similarity=0.199  Sum_probs=38.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~  343 (474)
                      ..+.++++|+.+++-||+|+|+.|++.|-+|.+ |+.++++.++.++.
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~~~~~~~l~~~~~~~~   55 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILVGTWVPALNIFETSLR   55 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeCcchhhHHHHhhh
Confidence            467899999931137999999999999999999 88899988876654

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=93.17  E-value=0.19  Score=50.25  Aligned_cols=39  Identities=18%  Similarity=0.129  Sum_probs=32.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  338 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l  338 (474)
                      .+.|+|+|++|  -||+++++.|.++|.+|.+  |+.++.+.+
T Consensus         5 ~k~vlVtG~~G--~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~   45 (325)
T PLN02989          5 GKVVCVTGASG--YIASWIVKLLLFRGYTINATVRDPKDRKKT   45 (325)
T ss_pred             CCEEEEECCch--HHHHHHHHHHHHCCCEEEEEEcCCcchhhH
Confidence            36899999999  9999999999999999876  666554443

>PRK08628 short chain dehydrogenase; Provisional

Probab=93.16  E-value=0.14  Score=49.23  Aligned_cols=43  Identities=14%  Similarity=0.169  Sum_probs=34.7

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      ...+.++++||+|  -||+++|+.|+++|.+|.+  |++++. ++.++
T Consensus         5 l~~~~ilItGasg--giG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~   49 (258)
T PRK08628          5 LKDKVVIVTGGAS--GIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEE   49 (258)
T ss_pred             cCCCEEEEeCCCC--hHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHH
Confidence            3456899999998  9999999999999999988  666655 44444

>PRK06128 oxidoreductase; Provisional

Probab=93.11  E-value=0.19  Score=50.21  Aligned_cols=43  Identities=19%  Similarity=0.285  Sum_probs=33.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc--hhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~--~~~~~~l~~~~  342 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  ++  .++.+++.+++
T Consensus        55 ~k~vlITGas~--gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~  101 (300)
T PRK06128         55 GRKALITGADS--GIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLI  101 (300)
T ss_pred             CCEEEEecCCC--cHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHH
Confidence            46899999998  9999999999999999988  32  23445554443

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=93.06  E-value=0.19  Score=47.50  Aligned_cols=39  Identities=18%  Similarity=0.333  Sum_probs=32.0

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      +|.|+|+ |  .+|+.||..+++.|.+|.+  ++++.+++.+++
T Consensus         1 ~V~ViGa-G--~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~   41 (180)
T PF02737_consen    1 KVAVIGA-G--TMGRGIAALFARAGYEVTLYDRSPEALERARKR   41 (180)
T ss_dssp             EEEEES--S--HHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHH
T ss_pred             CEEEEcC-C--HHHHHHHHHHHhCCCcEEEEECChHHHHhhhhH
Confidence            5899999 5  9999999999999999999  777766655544

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.04  E-value=0.1  Score=52.75  Aligned_cols=88  Identities=15%  Similarity=0.141  Sum_probs=55.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc-------------cc---ccceeeec-cccc-
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-------------EA---QHNLVLST-SYAA-  358 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~-------------~~---~~~l~~~t-~~~~-  358 (474)
                      ++|.|+|+-   .+|+.+|..|++.|.+|++  ++++.++..++++..             +.   ....+..+ ++++ 
T Consensus         6 ~~V~ViGaG---~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~   82 (286)
T PRK07819          6 QRVGVVGAG---QMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDLGDF   82 (286)
T ss_pred             cEEEEEccc---HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCHHHh
Confidence            589999995   8999999999999999999  788877763322111             10   01112233 4544 


Q ss_pred             CceeEEE--EcCcCChh-----hhhcC--CCCceeecccc
Q 011973          359 HKTKIWL--VGDDLTGK-----EQARA--PKGTIFIPYTQ  389 (474)
Q Consensus       359 ~~~~vwi--vg~~i~~~-----eq~~a--~~G~~f~~~~~  389 (474)
                      ++++++|  |-+.++-+     +..++  ++|++++.-+-
T Consensus        83 ~~~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snTS  122 (286)
T PRK07819         83 ADRQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNTS  122 (286)
T ss_pred             CCCCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence            7787766  32322222     12233  88999887665

>PRK06179 short chain dehydrogenase; Provisional

Probab=93.03  E-value=0.12  Score=50.05  Aligned_cols=35  Identities=20%  Similarity=0.242  Sum_probs=30.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhH
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  335 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~  335 (474)
                      +.|+++|++|  -||+++|+.|+++|.+|++  |+.++.
T Consensus         5 ~~vlVtGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~   41 (270)
T PRK06179          5 KVALVTGASS--GIGRATAEKLARAGYRVFGTSRNPARA   41 (270)
T ss_pred             CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCChhhc
Confidence            5799999998  9999999999999999998  665543

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.02  E-value=0.16  Score=48.87  Aligned_cols=41  Identities=22%  Similarity=0.361  Sum_probs=33.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKL  340 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~  340 (474)
                      .+.++++|++|  -||+++|+.|+++|.+|.+   ++++..+++++
T Consensus         7 ~k~~lItGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~   50 (255)
T PRK06463          7 GKVALITGGTR--GIGRAIAEAFLREGAKVAVLYNSAENEAKELRE   50 (255)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh
Confidence            46899999998  9999999999999999987   34455555654

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.01  E-value=0.16  Score=49.52  Aligned_cols=44  Identities=16%  Similarity=0.137  Sum_probs=32.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch---hhHHHHHhhC
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRI  342 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~---~~~~~l~~~~  342 (474)
                      +.++++|+++++-||+|+|+.|+++|.+|.+  |+.   +..++++++.
T Consensus         9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~   57 (260)
T PRK06603          9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEI   57 (260)
T ss_pred             cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhc
Confidence            5789999995345999999999999999988  552   2344454443

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.00  E-value=0.24  Score=51.15  Aligned_cols=80  Identities=20%  Similarity=0.202  Sum_probs=55.8

Q ss_pred             HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc
Q 011973          286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  358 (474)
Q Consensus       286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~  358 (474)
                      |++.|++=+     +-.-++|.++|..+  -+|+.+|..|.++|..|++  +...                     +.++
T Consensus       142 Tp~aii~lL~~~~i~l~Gk~V~vIG~s~--ivG~PmA~~L~~~gatVtv~~~~t~---------------------~l~e  198 (301)
T PRK14194        142 TPSGCLRLLEDTCGDLTGKHAVVIGRSN--IVGKPMAALLLQAHCSVTVVHSRST---------------------DAKA  198 (301)
T ss_pred             cHHHHHHHHHHhCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEECCCCC---------------------CHHH
Confidence            566666544     34688999999998  9999999999999999999  2111                     1111


Q ss_pred             --CceeEEE--EcC--cCChhhhhcCCCCceeecccccCc
Q 011973          359 --HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       359 --~~~~vwi--vg~--~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                        +.++|+|  +|+  .++++   ++++|+++||++ +++
T Consensus       199 ~~~~ADIVIsavg~~~~v~~~---~ik~GaiVIDvg-in~  234 (301)
T PRK14194        199 LCRQADIVVAAVGRPRLIDAD---WLKPGAVVIDVG-INR  234 (301)
T ss_pred             HHhcCCEEEEecCChhcccHh---hccCCcEEEEec-ccc
Confidence              3444544  444  34433   469999999999 554

>PRK12937 short chain dehydrogenase; Provisional

Probab=92.93  E-value=0.16  Score=48.11  Aligned_cols=43  Identities=21%  Similarity=0.297  Sum_probs=34.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~~~~~~l~~~~  342 (474)
                      .+.|+++|++|  -||+++|+.|+++|.++++  + +.++.+++.+++
T Consensus         5 ~~~vlItG~~~--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~   50 (245)
T PRK12937          5 NKVAIVTGASR--GIGAAIARRLAADGFAVAVNYAGSAAAADELVAEI   50 (245)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHH
Confidence            46899999998  9999999999999999877  3 344455555543

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.92  E-value=0.16  Score=48.12  Aligned_cols=44  Identities=20%  Similarity=0.295  Sum_probs=37.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |++++++.+.+++.
T Consensus         5 ~~~~lItG~~g--~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~   50 (253)
T PRK08217          5 DKVIVITGGAQ--GLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECG   50 (253)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            45799999998  9999999999999999888  88888777766643

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.92  E-value=0.21  Score=51.13  Aligned_cols=89  Identities=28%  Similarity=0.301  Sum_probs=59.8

Q ss_pred             HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973          286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-  358 (474)
Q Consensus       286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-  358 (474)
                      |+..|++=+     +-.-++|+|+|.++  -||+-+|..|.++|..|++ .++.  .                  ++++ 
T Consensus       141 Tp~aii~lL~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVt~~hs~t--~------------------~l~~~  198 (285)
T PRK14189        141 TPYGVMKMLESIGIPLRGAHAVVIGRSN--IVGKPMAMLLLQAGATVTICHSKT--R------------------DLAAH  198 (285)
T ss_pred             CHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEecCCC--C------------------CHHHH
Confidence            566665543     44688999999997  8899999999999999998 1110  0                  1111 


Q ss_pred             -CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCee
Q 011973          359 -HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF  400 (474)
Q Consensus       359 -~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~  400 (474)
                       +.+|++|  +|  ..++++.   .++|+++||+. +++.   ++--|+-
T Consensus       199 ~~~ADIVV~avG~~~~i~~~~---ik~gavVIDVG-in~~~~gkl~GDVd  244 (285)
T PRK14189        199 TRQADIVVAAVGKRNVLTADM---VKPGATVIDVG-MNRDDAGKLCGDVD  244 (285)
T ss_pred             hhhCCEEEEcCCCcCccCHHH---cCCCCEEEEcc-ccccCCCCeeCCcc
Confidence             3455555  33  2456544   49999999998 6652   3445554

>PLN02214 cinnamoyl-CoA reductase

Probab=92.91  E-value=0.23  Score=50.76  Aligned_cols=35  Identities=23%  Similarity=0.209  Sum_probs=30.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      .++|+|+|++|  -||+++++.|.++|.+|..  |+.++
T Consensus        10 ~~~vlVTGatG--fIG~~l~~~L~~~G~~V~~~~r~~~~   46 (342)
T PLN02214         10 GKTVCVTGAGG--YIASWIVKILLERGYTVKGTVRNPDD   46 (342)
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCcCEEEEEeCCchh
Confidence            46799999999  9999999999999999987  66554

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=92.88  E-value=0.094  Score=51.33  Aligned_cols=101  Identities=19%  Similarity=0.195  Sum_probs=64.3

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccCceeEEEEcCcCChhhhhc
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQAR  377 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~~vwivg~~i~~~eq~~  377 (474)
                      .|+|+|+||  -||++++++|.++|.+|..  |+.+....+.                    .-..|+.++..+.+....
T Consensus         2 ~ILVtG~tG--fiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------------------~~~~~~~~d~~~~~~~~~   59 (314)
T COG0451           2 RILVTGGAG--FIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------------------SGVEFVVLDLTDRDLVDE   59 (314)
T ss_pred             eEEEEcCcc--cHHHHHHHHHHhCCCeEEEEeCCCccccccc--------------------cccceeeecccchHHHHH
Confidence            399999999  9999999999999999998  3232111110                    001355555555533322


Q ss_pred             CCCCceeecccccCccCCCCCeeeecCCccccCCCCcc----ccccccccCcchhHHHHHhhh
Q 011973          378 APKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSN----MHSCENWLGRRVMSAWRIAGI  436 (474)
Q Consensus       378 a~~G~~f~~~~~v~p~~~R~dc~y~~~~am~vP~~~~~----~~~~e~~~prr~~~Ac~a~~~  436 (474)
                      +..+             .+ |+.++-......+....+    +..-|....++++.||.++++
T Consensus        60 ~~~~-------------~~-d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~  108 (314)
T COG0451          60 LAKG-------------VP-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGV  108 (314)
T ss_pred             HHhc-------------CC-CEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            2222             11 777777777766665432    445677788888888888544

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=92.85  E-value=0.19  Score=53.62  Aligned_cols=88  Identities=17%  Similarity=0.138  Sum_probs=59.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeecccc---c--CceeEEE--EcC
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA---A--HKTKIWL--VGD  368 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~---~--~~~~vwi--vg~  368 (474)
                      ..|++.|+ |  .||+++|..|++++ .+|++  |+.+...+++.....+.+-..+.....+   +  ++.+++|  +.-
T Consensus         2 ~~ilviGa-G--~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~   78 (389)
T COG1748           2 MKILVIGA-G--GVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP   78 (389)
T ss_pred             CcEEEECC-c--hhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence            47899999 7  89999999999888 88888  9999999998875443322222333222   2  5556666  222


Q ss_pred             cCChhh-hhcCCCCceeecccc
Q 011973          369 DLTGKE-QARAPKGTIFIPYTQ  389 (474)
Q Consensus       369 ~i~~~e-q~~a~~G~~f~~~~~  389 (474)
                      .++..= +.=++.|++++|.|-
T Consensus        79 ~~~~~i~ka~i~~gv~yvDts~  100 (389)
T COG1748          79 FVDLTILKACIKTGVDYVDTSY  100 (389)
T ss_pred             hhhHHHHHHHHHhCCCEEEccc
Confidence            222221 124578999999995

>PRK12747 short chain dehydrogenase; Provisional

Probab=92.85  E-value=0.16  Score=48.74  Aligned_cols=43  Identities=26%  Similarity=0.292  Sum_probs=35.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~  342 (474)
                      .+.++++|++|  -||+++|+.|++.|.+|.+   +++++.+++..++
T Consensus         4 ~k~~lItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~   49 (252)
T PRK12747          4 GKVALVTGASR--GIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEI   49 (252)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHH
Confidence            36899999998  9999999999999999987   4556666665554

>PRK07041 short chain dehydrogenase; Provisional

Probab=92.84  E-value=0.14  Score=48.21  Aligned_cols=40  Identities=18%  Similarity=0.253  Sum_probs=34.7

Q ss_pred             EEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          302 LLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       302 ~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +++|++|  -||+++|+.|+++|.+|++  |+.++.+.+.+++.
T Consensus         1 lItGas~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~   42 (230)
T PRK07041          1 LVVGGSS--GIGLALARAFAAEGARVTIASRSRDRLAAAARALG   42 (230)
T ss_pred             CeecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence            4789998  9999999999999999988  88888887776654

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.84  E-value=0.66  Score=47.77  Aligned_cols=140  Identities=15%  Similarity=0.211  Sum_probs=88.6

Q ss_pred             HHHHHHHHHHHHHHHHHcCCcE--EEecccccc-------ccccccC---ceeeec-CCCCcce----------eeecCC
Q 011973          227 REAINSLIEEAILEADAKGVKV--ISLGLLNQG-------EELNRNG---EIYLER-QPNKLKI----------KVVDGS  283 (474)
Q Consensus       227 ~~~in~~Ie~Ai~~A~k~G~kV--~~LG~ln~~-------e~ln~~g---~l~v~k-~p~~L~i----------rvv~Gn  283 (474)
                      ..+-+.-+....+.|++.|++.  +-|-.-.+.       +++|.|-   ++.++. -|.+++.          +=|||=
T Consensus        42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl  121 (293)
T PRK14185         42 DGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGF  121 (293)
T ss_pred             CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcCCC
Confidence            3445555677788999999998  556554432       3677764   333332 1333432          123333


Q ss_pred             h----------------hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhcc----CcEEEe-cchhhHHH
Q 011973          284 S----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEK  337 (474)
Q Consensus       284 s----------------ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~----~v~v~l-~~~~~~~~  337 (474)
                      +                -|++.|++=+     +-.-++|+|+|...  -||+-+|..|.++    +..|++ .++-    
T Consensus       122 ~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~T----  195 (293)
T PRK14185        122 HPINVGRMSIGLPCFVSATPNGILELLKRYHIETSGKKCVVLGRSN--IVGKPMAQLMMQKAYPGDCTVTVCHSRS----  195 (293)
T ss_pred             CHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHcCCCCCCCEEEEecCCC----
Confidence            2                1677766644     44578999999998  9999999999987    678887 2111    


Q ss_pred             HHhhCccccccceeeeccccc--CceeEEE--EcC--cCChhhhhcCCCCceeecccccCc
Q 011973          338 LKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       338 l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--vg~--~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                                      .++++  +.++|+|  +|+  .++++..   ++|+++||+. +.+
T Consensus       196 ----------------~nl~~~~~~ADIvIsAvGkp~~i~~~~v---k~gavVIDvG-in~  236 (293)
T PRK14185        196 ----------------KNLKKECLEADIIIAALGQPEFVKADMV---KEGAVVIDVG-TTR  236 (293)
T ss_pred             ----------------CCHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-Ccc
Confidence                            01121  4566666  443  4666555   9999999998 655

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=92.80  E-value=0.14  Score=49.87  Aligned_cols=32  Identities=19%  Similarity=0.317  Sum_probs=27.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.|+++|++|++-||+++|+.|+++|.+|.+
T Consensus         6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~   37 (258)
T PRK07370          6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGI   37 (258)
T ss_pred             CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEE
Confidence            46789999973247999999999999999987

>PRK06123 short chain dehydrogenase; Provisional

Probab=92.75  E-value=0.18  Score=47.97  Aligned_cols=42  Identities=19%  Similarity=0.213  Sum_probs=33.8

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  342 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~  342 (474)
                      +.++|+|++|  -||+++|+.|+++|.+|.+   +++++.+.+.+++
T Consensus         3 ~~~lVtG~~~--~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l   47 (248)
T PRK06123          3 KVMIITGASR--GIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAI   47 (248)
T ss_pred             CEEEEECCCc--hHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHH
Confidence            4789999998  9999999999999988877   4555666655554

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=92.69  E-value=0.14  Score=53.37  Aligned_cols=39  Identities=18%  Similarity=0.156  Sum_probs=34.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHH
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  337 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~  337 (474)
                      +.+.|+|+||+|  =||+.|+..|-++|..|.-  |++++-++
T Consensus         5 ~~~~VcVTGAsG--fIgswivk~LL~rGY~V~gtVR~~~~~k~   45 (327)
T KOG1502|consen    5 EGKKVCVTGASG--FIGSWIVKLLLSRGYTVRGTVRDPEDEKK   45 (327)
T ss_pred             CCcEEEEeCCch--HHHHHHHHHHHhCCCEEEEEEcCcchhhh
Confidence            578999999999  9999999999999999987  88887443

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=92.69  E-value=0.17  Score=48.82  Aligned_cols=44  Identities=18%  Similarity=0.190  Sum_probs=35.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~~~~~~l~~~~  342 (474)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  | +++..+.+.+++
T Consensus         6 ~~k~~lItGa~~--gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l   52 (261)
T PRK08936          6 EGKVVVITGGST--GLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEI   52 (261)
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            346899999998  9999999999999999987  4 445555555554

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.55  E-value=0.21  Score=49.20  Aligned_cols=32  Identities=19%  Similarity=0.357  Sum_probs=27.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.++++|+++|.-||+|+|+.|+++|.+|.+
T Consensus         6 ~k~~lITGas~~~GIG~aia~~la~~G~~vil   37 (262)
T PRK07984          6 GKRILVTGVASKLSIAYGIAQAMHREGAELAF   37 (262)
T ss_pred             CCEEEEeCCCCCccHHHHHHHHHHHCCCEEEE
Confidence            35789999984346999999999999999988

>PRK07985 oxidoreductase; Provisional

Probab=92.51  E-value=0.19  Score=50.21  Aligned_cols=43  Identities=23%  Similarity=0.320  Sum_probs=34.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc--hhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~--~~~~~~l~~~~  342 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+  .++.+++++.+
T Consensus        49 ~k~vlITGas~--gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~   95 (294)
T PRK07985         49 DRKALVTGGDS--GIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKII   95 (294)
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHH
Confidence            36899999998  9999999999999999988  32  34556665443

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=92.50  E-value=0.18  Score=47.93  Aligned_cols=44  Identities=23%  Similarity=0.307  Sum_probs=36.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~  343 (474)
                      .+.++++|++|  -||+++|+.|.++|.+|++   |++++.+++.+++.
T Consensus         6 ~~~~lItG~s~--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~   52 (247)
T PRK12935          6 GKVAIVTGGAK--GIGKAITVALAQEGAKVVINYNSSKEAAENLVNELG   52 (247)
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHH
Confidence            46899999998  9999999999999999987   45667766655543

>PRK06484 short chain dehydrogenase; Validated

Probab=92.49  E-value=0.22  Score=53.41  Aligned_cols=47  Identities=13%  Similarity=0.159  Sum_probs=41.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  345 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~  345 (474)
                      ..+.|+|+|+++  -||+++|+.|.++|.+|.+  |+.++++++.+++..+
T Consensus         4 ~~k~~lITGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~   52 (520)
T PRK06484          4 QSRVVLVTGAAG--GIGRAACQRFARAGDQVVVADRNVERARERADSLGPD   52 (520)
T ss_pred             CCeEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCc
Confidence            346899999997  9999999999999999988  8999999988887543

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.47  E-value=0.24  Score=49.66  Aligned_cols=92  Identities=17%  Similarity=0.233  Sum_probs=59.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc-----------------ccceeeecccc-c
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA-----------------QHNLVLSTSYA-A  358 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~-----------------~~~l~~~t~~~-~  358 (474)
                      ++|.++|+-   .+|+++|..|++.|.+|++  +++++++++++++....                 ..++...++++ +
T Consensus         2 ~~V~VIG~G---~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~   78 (288)
T PRK09260          2 EKLVVVGAG---VMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAA   78 (288)
T ss_pred             cEEEEECcc---HHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHh
Confidence            479999995   9999999999999999999  88888888765421100                 01111122554 3


Q ss_pred             -CceeEEE--EcCcCChh-----h-hhcCCCCcee-ecccccCcc
Q 011973          359 -HKTKIWL--VGDDLTGK-----E-QARAPKGTIF-IPYTQIPPR  393 (474)
Q Consensus       359 -~~~~vwi--vg~~i~~~-----e-q~~a~~G~~f-~~~~~v~p~  393 (474)
                       ++++++|  +.+..+-+     + ...+++|+++ ++-|-++|.
T Consensus        79 ~~~aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt~~~~  123 (288)
T PRK09260         79 VADADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTSTMSPT  123 (288)
T ss_pred             hcCCCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCCCCHH
Confidence             7777765  33322211     1 1246889866 677778877

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.44  E-value=0.23  Score=46.81  Aligned_cols=43  Identities=23%  Similarity=0.318  Sum_probs=35.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~  342 (474)
                      .+.++++|++|  .||+++|+.|+++|.+|.+   |+.++.+.+.+++
T Consensus         5 ~~~ilI~Gasg--~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~   50 (247)
T PRK05565          5 GKVAIVTGASG--GIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEI   50 (247)
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            35799999998  9999999999999999877   5566666665553

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.42  E-value=0.22  Score=48.51  Aligned_cols=47  Identities=23%  Similarity=0.345  Sum_probs=36.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch--hhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~--~~~~~l~~~~~~  344 (474)
                      .+.|+++|+++++-||+++|+.|+++|.+|.+  |++  +..++++++++.
T Consensus         7 ~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~   57 (256)
T PRK07889          7 GKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPE   57 (256)
T ss_pred             CCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCC
Confidence            35799999931148999999999999999998  443  556777777654

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=92.38  E-value=0.19  Score=48.25  Aligned_cols=42  Identities=14%  Similarity=0.192  Sum_probs=33.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++ ..+++.+++
T Consensus         8 ~k~vlVtGas~--gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~   51 (260)
T PRK12823          8 GKVVVVTGAAQ--GIGRGVALRAAAEGARVVLVDRSE-LVHEVAAEL   51 (260)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHH
Confidence            46899999998  9999999999999999988  553 344555544

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=92.36  E-value=0.93  Score=44.68  Aligned_cols=29  Identities=31%  Similarity=0.405  Sum_probs=26.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEE
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVA  328 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~  328 (474)
                      ..++|++.| .|  +||+.+|+.|.+.|.+|+
T Consensus        30 ~~~~v~I~G-~G--~VG~~~a~~L~~~g~~vv   58 (227)
T cd01076          30 AGARVAIQG-FG--NVGSHAARFLHEAGAKVV   58 (227)
T ss_pred             cCCEEEEEC-CC--HHHHHHHHHHHHCCCEEE
Confidence            468999999 46  999999999999999999

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=92.34  E-value=0.82  Score=48.16  Aligned_cols=44  Identities=20%  Similarity=0.221  Sum_probs=38.9

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      ...++|+++|. |  ++|+.+++.|.+.|.++++  +++++.+.++++.
T Consensus       229 ~~~~~iiIiG~-G--~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~  274 (453)
T PRK09496        229 KPVKRVMIVGG-G--NIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL  274 (453)
T ss_pred             CCCCEEEEECC-C--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC
Confidence            35789999999 5  9999999999999999988  8888899888864

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=92.33  E-value=0.21  Score=47.27  Aligned_cols=42  Identities=26%  Similarity=0.196  Sum_probs=34.5

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  342 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~  342 (474)
                      +.|+++|++|  -||+++++.|.++|.+|.+   |+.++.+++.+++
T Consensus         2 ~~~lItGa~g--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~   46 (247)
T PRK09730          2 AIALVTGGSR--GIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLI   46 (247)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHH
Confidence            4689999998  9999999999999999865   6666666665553

>PRK06483 dihydromonapterin reductase; Provisional

Probab=92.32  E-value=0.23  Score=47.10  Aligned_cols=35  Identities=23%  Similarity=0.226  Sum_probs=30.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|++  |++++
T Consensus         2 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~   38 (236)
T PRK06483          2 PAPILITGAGQ--RIGLALAWHLLAQGQPVIVSYRTHYP   38 (236)
T ss_pred             CceEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCCchh
Confidence            35799999998  9999999999999999988  65543

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.29  E-value=0.24  Score=50.77  Aligned_cols=103  Identities=18%  Similarity=0.186  Sum_probs=67.6

Q ss_pred             HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhc--cCcEEEe-cchhhHHHHHhhCccccccceeeecccc
Q 011973          286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQ--MGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYA  357 (474)
Q Consensus       286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~--~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~  357 (474)
                      |+..|++=+     +-.-++|+|+|.+.  -||+-+|..|.+  ++..|++ .++-                    .+++
T Consensus       141 Tp~av~~ll~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~~~atVtvchs~T--------------------~~l~  198 (284)
T PRK14193        141 TPRGIVHLLRRYDVELAGAHVVVIGRGV--TVGRPIGLLLTRRSENATVTLCHTGT--------------------RDLA  198 (284)
T ss_pred             CHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHhhccCCCEEEEeCCCC--------------------CCHH
Confidence            666666544     44678999999998  999999999997  7888888 2211                    0112


Q ss_pred             c--CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCee----eecCCccccCCCCc
Q 011973          358 A--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF----YHSTPAMIIPPSLS  414 (474)
Q Consensus       358 ~--~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~----y~~~~am~vP~~~~  414 (474)
                      +  +.+||+|  +|  +.++++..   ++|+++||+. +++.   ++--|+-    ..-...+.||+.+-
T Consensus       199 ~~~k~ADIvV~AvGkp~~i~~~~i---k~GavVIDvG-in~~~~gkl~GDvd~~v~~~a~~iTPVPGGVG  264 (284)
T PRK14193        199 AHTRRADIIVAAAGVAHLVTADMV---KPGAAVLDVG-VSRAGDGKLVGDVHPDVWEVAGAVSPNPGGVG  264 (284)
T ss_pred             HHHHhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-ccccCCCcEEeecCHhHHhhCCEEeCCCCChh
Confidence            1  3556655  34  35777777   9999999998 6662   3334444    22223355777654

>PLN02494 adenosylhomocysteinase

Probab=92.24  E-value=1.4  Score=48.29  Aligned_cols=156  Identities=15%  Similarity=0.143  Sum_probs=96.5

Q ss_pred             eeeecCChhHHHHHHhcCcC--CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee
Q 011973          277 IKVVDGSSLAAAVVVNSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL  352 (474)
Q Consensus       277 irvv~GnsltaAvvl~~ip~--~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~  352 (474)
                      -|.=||.|. .-.+++....  .-++|.|+|.-   .||+.+|+.|...|.+|+.  ++..+...-... +.+.    + 
T Consensus       232 n~yGtgqS~-~d~i~r~t~i~LaGKtVvViGyG---~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~-G~~v----v-  301 (477)
T PLN02494        232 NLYGCRHSL-PDGLMRATDVMIAGKVAVICGYG---DVGKGCAAAMKAAGARVIVTEIDPICALQALME-GYQV----L-  301 (477)
T ss_pred             ccccccccH-HHHHHHhcCCccCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhc-CCee----c-
Confidence            466667775 3334444332  56789999987   8999999999999999998  444432221111 1110    1 


Q ss_pred             ecccc-c-CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---------------CCCCCeeeecCC----cc
Q 011973          353 STSYA-A-HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---------------KLRKDCFYHSTP----AM  407 (474)
Q Consensus       353 ~t~~~-~-~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---------------~~R~dc~y~~~~----am  407 (474)
                        +.+ . +.++++|  .|  ..+..+....+++|++++-+.++.+.               +.|..+..-+.+    .+
T Consensus       302 --~leEal~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~~eID~~aL~~~~~l~~~~i~~~vd~y~~~d~g~~i  379 (477)
T PLN02494        302 --TLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGSGI  379 (477)
T ss_pred             --cHHHHHhhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCCCccCHHHHhhccccceeccCCCceEEEcCCCCCEE
Confidence              222 2 4566666  33  23578899999999999999985422               222222211111    12


Q ss_pred             c--cCCCCccccccccccCcchhHHHHHhhhhhhhcCCCC
Q 011973          408 I--IPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDL  445 (474)
Q Consensus       408 ~--vP~~~~~~~~~e~~~prr~~~Ac~a~~~v~alEgw~~  445 (474)
                      .  --+.+-|+- |-.+.|..+|.--++--.+-..|-|..
T Consensus       380 ~ll~eGrlvNl~-~~~GhP~evmd~sFa~Q~la~~~l~~~  418 (477)
T PLN02494        380 IVLAEGRLMNLG-CATGHPSFVMSCSFTNQVIAQLELWNE  418 (477)
T ss_pred             EEEeCCcccccc-CCCCCCcceeeHHHHHHHHHHHHHHhc
Confidence            1  222466677 889999999999887766666666654

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=92.22  E-value=0.22  Score=51.79  Aligned_cols=85  Identities=15%  Similarity=0.200  Sum_probs=50.4

Q ss_pred             EEEeccCCCchhHHHHHHHHhccC-c-EEEe--cchhhHHHHHhhCcccc-ccceeeecccc---c--CceeEEE--EcC
Q 011973          301 VLLRGTVTANKVANAVASSLCQMG-I-KVAT--ICKDDYEKLKLRIPVEA-QHNLVLSTSYA---A--HKTKIWL--VGD  368 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~-v-~v~l--~~~~~~~~l~~~~~~~~-~~~l~~~t~~~---~--~~~~vwi--vg~  368 (474)
                      |++.|+ |  .+|+++|+.|.++. . ++++  ||.++++++.+++.... +...+.+++.+   +  +.++++|  +|.
T Consensus         1 IlvlG~-G--~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp   77 (386)
T PF03435_consen    1 ILVLGA-G--RVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP   77 (386)
T ss_dssp             EEEE---S--HHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred             CEEEcC-c--HHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence            689999 9  99999999999776 4 7888  99999999988752222 11112333322   2  7778877  444


Q ss_pred             cCChhhhh-cCCCCceeeccc
Q 011973          369 DLTGKEQA-RAPKGTIFIPYT  388 (474)
Q Consensus       369 ~i~~~eq~-~a~~G~~f~~~~  388 (474)
                      ...+.=.+ =+..|++++|.+
T Consensus        78 ~~~~~v~~~~i~~g~~yvD~~   98 (386)
T PF03435_consen   78 FFGEPVARACIEAGVHYVDTS   98 (386)
T ss_dssp             GGHHHHHHHHHHHT-EEEESS
T ss_pred             chhHHHHHHHHHhCCCeeccc
Confidence            42221111 124588888855

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=92.14  E-value=0.2  Score=48.49  Aligned_cols=31  Identities=16%  Similarity=0.298  Sum_probs=28.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ..+.|+++|+++  -||+++|+.|+++|.+|.+
T Consensus         7 ~~k~~lItGas~--gIG~aia~~l~~~G~~vv~   37 (251)
T PRK12481          7 NGKVAIITGCNT--GLGQGMAIGLAKAGADIVG   37 (251)
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence            347899999997  9999999999999999998

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.13  E-value=0.26  Score=48.65  Aligned_cols=46  Identities=20%  Similarity=0.195  Sum_probs=35.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc---hhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC---KDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~---~~~~~~l~~~~~  343 (474)
                      .+.|+++|+++++-||+++|+.|+++|.+|.+  |+   .++++++++++.
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~   60 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG   60 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC
Confidence            36799999972137999999999999999988  54   356666766653

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=92.08  E-value=0.13  Score=50.55  Aligned_cols=33  Identities=21%  Similarity=0.258  Sum_probs=29.2

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      .|+|+||||  .||+.+++.|.++|.+|..  |+.++
T Consensus         1 ~ilVtGatG--~iG~~vv~~L~~~g~~V~~~~R~~~~   35 (285)
T TIGR03649         1 TILLTGGTG--KTASRIARLLQAASVPFLVASRSSSS   35 (285)
T ss_pred             CEEEEcCCC--hHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence            389999999  9999999999999998888  77654

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=92.05  E-value=0.35  Score=49.46  Aligned_cols=31  Identities=13%  Similarity=0.174  Sum_probs=28.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ..++|+|+|+||  =||+.+++.|.++|.+|+.
T Consensus        14 ~~~~vlVtGatG--fiG~~lv~~L~~~g~~V~~   44 (348)
T PRK15181         14 APKRWLITGVAG--FIGSGLLEELLFLNQTVIG   44 (348)
T ss_pred             cCCEEEEECCcc--HHHHHHHHHHHHCCCEEEE
Confidence            457899999999  9999999999999999876

>PRK06720 hypothetical protein; Provisional

Probab=92.03  E-value=0.27  Score=46.03  Aligned_cols=44  Identities=18%  Similarity=0.168  Sum_probs=36.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      ..+.++++|+++  -||+++|+.|+++|.+|.+  |+.+..+...+++
T Consensus        15 ~gk~~lVTGa~~--GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l   60 (169)
T PRK06720         15 AGKVAIVTGGGI--GIGRNTALLLAKQGAKVIVTDIDQESGQATVEEI   60 (169)
T ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            456889999997  8999999999999999988  6676666665554

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=91.97  E-value=0.26  Score=45.82  Aligned_cols=92  Identities=15%  Similarity=0.159  Sum_probs=59.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccc----ee-----------eeccccc--
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHN----LV-----------LSTSYAA--  358 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~----l~-----------~~t~~~~--  358 (474)
                      .++|+|+|+-   .+|...++.|.+.|.+|+.  .+.++.++++..........    ..           +..+|++  
T Consensus        20 p~~vvv~G~G---~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f   96 (168)
T PF01262_consen   20 PAKVVVTGAG---RVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNF   96 (168)
T ss_dssp             T-EEEEESTS---HHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHH
T ss_pred             CeEEEEECCC---HHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHH
Confidence            4788999965   9999999999999999999  55556666554422211110    00           0122321  


Q ss_pred             ----CceeEEE---------EcCcCChhhhhcCCCCceeecccccCcc
Q 011973          359 ----HKTKIWL---------VGDDLTGKEQARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       359 ----~~~~vwi---------vg~~i~~~eq~~a~~G~~f~~~~~v~p~  393 (474)
                          +.++++|         .-..++.++.++++||.+++|+| .+.-
T Consensus        97 ~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis-~D~g  143 (168)
T PF01262_consen   97 AEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS-CDQG  143 (168)
T ss_dssp             HHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT-GGGT
T ss_pred             HHHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE-ecCC
Confidence                5556766         33578999999999999999999 6554

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK06114 short chain dehydrogenase; Provisional

Probab=91.96  E-value=0.28  Score=47.27  Aligned_cols=44  Identities=20%  Similarity=0.279  Sum_probs=34.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~-~~~~~l~~~~  342 (474)
                      ..+.++++|++|  -||+++|+.|+++|.+|.+  |+. +.++++.+++
T Consensus         7 ~~k~~lVtG~s~--gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l   53 (254)
T PRK06114          7 DGQVAFVTGAGS--GIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHI   53 (254)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence            356899999998  9999999999999999998  543 3455555544

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=91.95  E-value=0.26  Score=47.84  Aligned_cols=44  Identities=16%  Similarity=0.218  Sum_probs=32.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.|+++|+++++-||+++|+.|+++|.+|.+  |+ ++.++..+++
T Consensus         7 ~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~   52 (252)
T PRK06079          7 GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKL   52 (252)
T ss_pred             CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhh
Confidence            46799999982127999999999999999998  65 3444433343

>PRK06198 short chain dehydrogenase; Provisional

Probab=91.94  E-value=0.23  Score=47.66  Aligned_cols=43  Identities=14%  Similarity=0.191  Sum_probs=35.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~-v~l--~~~~~~~~l~~~~  342 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+ |.+  |+.++.+.+.+++
T Consensus         6 ~k~vlItGa~g--~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l   51 (260)
T PRK06198          6 GKVALVTGGTQ--GLGAAIARAFAERGAAGLVICGRNAEKGEAQAAEL   51 (260)
T ss_pred             CcEEEEeCCCc--hHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHH
Confidence            46799999998  8999999999999999 777  7777666555544

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.92  E-value=0.33  Score=49.74  Aligned_cols=92  Identities=20%  Similarity=0.214  Sum_probs=61.0

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973          285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  358 (474)
Q Consensus       285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~  358 (474)
                      -|++.|++=+     +-.-++|+|+|...  -||+-+|..|.++|-.|++ .++.  ++|++.         +       
T Consensus       139 cTp~avi~lL~~~~i~l~Gk~vvVvGrs~--~VG~Pla~lL~~~gAtVtv~hs~t--~~l~~~---------~-------  198 (285)
T PRK14191        139 ATPMGVMRLLKHYHIEIKGKDVVIIGASN--IVGKPLAMLMLNAGASVSVCHILT--KDLSFY---------T-------  198 (285)
T ss_pred             CcHHHHHHHHHHhCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCEEEEEeCCc--HHHHHH---------H-------
Confidence            3666666544     44678999999997  9999999999999999998 2111  011100         0       


Q ss_pred             CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCee
Q 011973          359 HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF  400 (474)
Q Consensus       359 ~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~  400 (474)
                      +.++|+|  +|  +.++++..   ++|+++||+. +++.   ++--|+-
T Consensus       199 ~~ADIvV~AvG~p~~i~~~~v---k~GavVIDvG-i~~~~~gklvGDvd  243 (285)
T PRK14191        199 QNADIVCVGVGKPDLIKASMV---KKGAVVVDIG-INRLNDGRLVGDVD  243 (285)
T ss_pred             HhCCEEEEecCCCCcCCHHHc---CCCcEEEEee-cccccCCceecccc
Confidence            2455555  33  34666655   9999999998 6552   3445554

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=91.92  E-value=1  Score=43.41  Aligned_cols=84  Identities=13%  Similarity=0.151  Sum_probs=58.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccCceeEEE---EcCcCC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL---VGDDLT  371 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~~vwi---vg~~i~  371 (474)
                      ..++|.+.|.-   ++|+++|+.|.+.|.+|+.  ++.++.+.+++++...    .+.....-..+++|.+   .+..|+
T Consensus        27 ~gk~v~I~G~G---~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~----~v~~~~l~~~~~Dv~vp~A~~~~I~   99 (200)
T cd01075          27 EGKTVAVQGLG---KVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT----VVAPEEIYSVDADVFAPCALGGVIN   99 (200)
T ss_pred             CCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE----EEcchhhccccCCEEEecccccccC
Confidence            45789999994   8999999999999999999  7778888887765211    1211111114677766   567889


Q ss_pred             hhhhhcCCCCceeeccc
Q 011973          372 GKEQARAPKGTIFIPYT  388 (474)
Q Consensus       372 ~~eq~~a~~G~~f~~~~  388 (474)
                      .+...+++.. .++.-+
T Consensus       100 ~~~~~~l~~~-~v~~~A  115 (200)
T cd01075         100 DDTIPQLKAK-AIAGAA  115 (200)
T ss_pred             HHHHHHcCCC-EEEECC
Confidence            8888777644 344443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.90  E-value=0.31  Score=49.98  Aligned_cols=81  Identities=15%  Similarity=0.179  Sum_probs=58.4

Q ss_pred             HHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973          286 AAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-  358 (474)
Q Consensus       286 taAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-  358 (474)
                      |++.|++=+.     -.-++|+++|.+.  -||+-+|..|.++|..|++ .++-                    .++++ 
T Consensus       140 Tp~avi~lL~~~~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVtichs~T--------------------~~l~~~  197 (284)
T PRK14170        140 TPAGIIELIKSTGTQIEGKRAVVIGRSN--IVGKPVAQLLLNENATVTIAHSRT--------------------KDLPQV  197 (284)
T ss_pred             CHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--------------------CCHHHH
Confidence            6666665443     3688999999998  9999999999999999998 2111                    01121 


Q ss_pred             -CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973          359 -HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       359 -~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                       +++||+|  +|  ..++++..   ++|+++||+. ++.
T Consensus       198 ~~~ADIvI~AvG~~~~i~~~~v---k~GavVIDvG-in~  232 (284)
T PRK14170        198 AKEADILVVATGLAKFVKKDYI---KPGAIVIDVG-MDR  232 (284)
T ss_pred             HhhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-Ccc
Confidence             3566656  33  35777766   8999999998 665

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.89  E-value=0.27  Score=50.60  Aligned_cols=81  Identities=20%  Similarity=0.165  Sum_probs=58.9

Q ss_pred             HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973          286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-  358 (474)
Q Consensus       286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-  358 (474)
                      |++.|++=+     +-.-++|+|+|.+.  -||+-+|..|.++|-.|++ .++-                    .++++ 
T Consensus       143 Tp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVt~chs~T--------------------~~l~~~  200 (294)
T PRK14187        143 TPKGCLYLIKTITRNLSGSDAVVIGRSN--IVGKPMACLLLGENCTVTTVHSAT--------------------RDLADY  200 (294)
T ss_pred             CHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhhCCCEEEEeCCCC--------------------CCHHHH
Confidence            777766544     44688999999998  9999999999999999998 2111                    01121 


Q ss_pred             -CceeEEE--EcCc--CChhhhhcCCCCceeecccccCc
Q 011973          359 -HKTKIWL--VGDD--LTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       359 -~~~~vwi--vg~~--i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                       +.+||+|  +|+-  ++++..   ++|+++||+- +++
T Consensus       201 ~~~ADIvVsAvGkp~~i~~~~i---k~gaiVIDVG-in~  235 (294)
T PRK14187        201 CSKADILVAAVGIPNFVKYSWI---KKGAIVIDVG-INS  235 (294)
T ss_pred             HhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence             3556655  5544  777777   8999999996 554

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=91.87  E-value=0.2  Score=50.61  Aligned_cols=102  Identities=16%  Similarity=0.176  Sum_probs=68.6

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--EcCc----
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VGDD----  369 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg~~----  369 (474)
                      +|.++|.-   .+|.++|+.|.+.|.+|.+  |++++.++++++-     .  ...++.+ . ++++++|  +-+.    
T Consensus         3 ~Ig~IGlG---~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g-----~--~~~~s~~~~~~~aDvVi~~vp~~~~~~   72 (296)
T PRK15461          3 AIAFIGLG---QMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKG-----A--TPAASPAQAAAGAEFVITMLPNGDLVR   72 (296)
T ss_pred             eEEEEeeC---HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcC-----C--cccCCHHHHHhcCCEEEEecCCHHHHH
Confidence            68889866   9999999999999999988  8888888887651     0  1122332 2 5555544  2111    


Q ss_pred             --CChh-h-hhcCCCCceeecccccCccCC--------CCCeeeecCCccccCC
Q 011973          370 --LTGK-E-QARAPKGTIFIPYTQIPPRKL--------RKDCFYHSTPAMIIPP  411 (474)
Q Consensus       370 --i~~~-e-q~~a~~G~~f~~~~~v~p~~~--------R~dc~y~~~~am~vP~  411 (474)
                        +... . ...+++|+++++.|.++|...        .+.+.|.+.|.+..|.
T Consensus        73 ~vl~~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~~~ldapV~g~~~  126 (296)
T PRK15461         73 SVLFGENGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSD  126 (296)
T ss_pred             HHHcCcccHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEEccCCCCHH
Confidence              1111 1 123589999999999988722        1567788888877665

>PRK07577 short chain dehydrogenase; Provisional

Probab=91.86  E-value=0.19  Score=47.29  Aligned_cols=33  Identities=21%  Similarity=0.272  Sum_probs=29.5

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      +.|+++|++|  .||+++|+.|+++|.+|.+  |+.+
T Consensus         4 k~vlItG~s~--~iG~~ia~~l~~~G~~v~~~~r~~~   38 (234)
T PRK07577          4 RTVLVTGATK--GIGLALSLRLANLGHQVIGIARSAI   38 (234)
T ss_pred             CEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            5799999998  9999999999999999988  5544

>PRK07856 short chain dehydrogenase; Provisional

Probab=91.85  E-value=0.21  Score=48.06  Aligned_cols=36  Identities=19%  Similarity=0.263  Sum_probs=31.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      ..+.++++|++|  -||+++|+.|+++|.+|++  |+.++
T Consensus         5 ~~k~~lItGas~--gIG~~la~~l~~~g~~v~~~~r~~~~   42 (252)
T PRK07856          5 TGRVVLVTGGTR--GIGAGIARAFLAAGATVVVCGRRAPE   42 (252)
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            357899999998  9999999999999999998  65543

>PLN02686 cinnamoyl-CoA reductase

Probab=91.85  E-value=0.27  Score=51.01  Aligned_cols=42  Identities=26%  Similarity=0.321  Sum_probs=35.1

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  339 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~  339 (474)
                      ...+.|+|+|++|  -||+++++.|.++|.+|.+  |+.++.+.++
T Consensus        51 ~~~k~VLVTGatG--fIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~   94 (367)
T PLN02686         51 AEARLVCVTGGVS--FLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR   94 (367)
T ss_pred             CCCCEEEEECCch--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            4567899999999  9999999999999999875  7766665553

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=91.80  E-value=0.29  Score=46.76  Aligned_cols=41  Identities=15%  Similarity=0.229  Sum_probs=32.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLR  341 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~-~~~~~~l~~~  341 (474)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+ .+..+++.++
T Consensus         3 k~vlItG~sg--~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~   46 (256)
T PRK12745          3 PVALVTGGRR--GIGLGIARALAAAGFDLAINDRPDDEELAATQQE   46 (256)
T ss_pred             cEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Confidence            5799999998  9999999999999999888  43 3444444333

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=91.80  E-value=0.33  Score=54.86  Aligned_cols=44  Identities=16%  Similarity=0.207  Sum_probs=38.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+.+.+++.
T Consensus       414 gkvvLVTGasg--gIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~  459 (676)
T TIGR02632       414 RRVAFVTGGAG--GIGRETARRLAAEGAHVVLADLNLEAAEAVAAEIN  459 (676)
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHH
Confidence            57899999998  9999999999999999988  88888887776654

>PRK05855 short chain dehydrogenase; Validated

Probab=91.72  E-value=0.25  Score=52.77  Aligned_cols=45  Identities=18%  Similarity=0.220  Sum_probs=39.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +...++|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus       314 ~~~~~lv~G~s~--giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~  360 (582)
T PRK05855        314 SGKLVVVTGAGS--GIGRETALAFAREGAEVVASDIDEAAAERTAELIR  360 (582)
T ss_pred             CCCEEEEECCcC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999988  88888888877653

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=91.69  E-value=0.21  Score=47.29  Aligned_cols=40  Identities=25%  Similarity=0.394  Sum_probs=32.1

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  342 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~  342 (474)
                      |+++|++|  -||+++|+.|+++|.+|.+   ++.++.+.+.+++
T Consensus         1 vlItGas~--giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l   43 (239)
T TIGR01831         1 VLVTGASR--GIGRAIANRLAADGFEICVHYHSGRSDAESVVSAI   43 (239)
T ss_pred             CEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            58999998  9999999999999999877   3445566665554

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08226 short chain dehydrogenase; Provisional

Probab=91.65  E-value=0.33  Score=46.74  Aligned_cols=34  Identities=15%  Similarity=0.367  Sum_probs=30.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |+++
T Consensus         6 ~~~~lItG~s~--giG~~la~~l~~~G~~Vv~~~r~~~   41 (263)
T PRK08226          6 GKTALITGALQ--GIGEGIARVFARHGANLILLDISPE   41 (263)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCHH
Confidence            46899999998  9999999999999999998  5543

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=91.65  E-value=0.29  Score=49.35  Aligned_cols=45  Identities=20%  Similarity=0.279  Sum_probs=39.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.++++|++.  -||+|+|+.|++.|-+|.+  |+++++++.++++.
T Consensus         7 ~gkvalVTG~s~--GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~   53 (270)
T KOG0725|consen    7 AGKVALVTGGSS--GIGKAIALLLAKAGAKVVITGRSEERLEETAQELG   53 (270)
T ss_pred             CCcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            356788999996  8999999999999999999  99999888877733

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=91.65  E-value=0.31  Score=49.03  Aligned_cols=45  Identities=18%  Similarity=0.235  Sum_probs=36.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~~~~~~l~~~~~  343 (474)
                      +.+.++|+|++|  -||+++|+.|+++|.+|.+  + +.++.+++.+++.
T Consensus        11 ~~k~~lVTGas~--gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~   58 (306)
T PRK07792         11 SGKVAVVTGAAA--GLGRAEALGLARLGATVVVNDVASALDASDVLDEIR   58 (306)
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHH
Confidence            456899999998  9999999999999999998  3 3455666666543

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=91.63  E-value=0.25  Score=47.64  Aligned_cols=33  Identities=15%  Similarity=0.226  Sum_probs=29.2

Q ss_pred             cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          295 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       295 p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ....+.++++|++|  -||+++|+.|+++|.+|.+
T Consensus         7 ~l~~k~~lItG~~~--gIG~a~a~~l~~~G~~vv~   39 (253)
T PRK08993          7 SLEGKVAVVTGCDT--GLGQGMALGLAEAGCDIVG   39 (253)
T ss_pred             CCCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence            33456899999998  9999999999999999987

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=91.58  E-value=1.7  Score=42.48  Aligned_cols=87  Identities=14%  Similarity=0.132  Sum_probs=58.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccCceeEEE--EcCcCChh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL--VGDDLTGK  373 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~~vwi--vg~~i~~~  373 (474)
                      ...|++.|++|  .+|.++++.+...|.++..  +++++.+.+++ ++...  .+...........++++  +|.....+
T Consensus       133 ~~~vli~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~--~~~~~~~~~~~~~d~vl~~~g~~~~~~  207 (305)
T cd08270         133 GRRVLVTGASG--GVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LGAAE--VVVGGSELSGAPVDLVVDSVGGPQLAR  207 (305)
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcE--EEeccccccCCCceEEEECCCcHHHHH
Confidence            67999999998  9999999999999999877  77888888876 44321  11100011113456666  44434455


Q ss_pred             hhhcCCCCceeecccc
Q 011973          374 EQARAPKGTIFIPYTQ  389 (474)
Q Consensus       374 eq~~a~~G~~f~~~~~  389 (474)
                      -.+.++++-+++.+..
T Consensus       208 ~~~~l~~~G~~v~~g~  223 (305)
T cd08270         208 ALELLAPGGTVVSVGS  223 (305)
T ss_pred             HHHHhcCCCEEEEEec
Confidence            5567778888888763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.55  E-value=0.37  Score=49.43  Aligned_cols=90  Identities=18%  Similarity=0.223  Sum_probs=61.5

Q ss_pred             hHHHHHHhc-----CcCCCcEEEEeccCCCchhHHHHHHHHhc----cCcEEEe-cchhhHHHHHhhCccccccceeeec
Q 011973          285 LAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLST  354 (474)
Q Consensus       285 ltaAvvl~~-----ip~~~~~V~l~Gatg~~kig~ava~~L~~----~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t  354 (474)
                      -|++.|++=     |+-.-++|+|+|...  -||+-+|..|.+    ++-.|++ .++.                    .
T Consensus       139 cTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~AtVt~~hs~t--------------------~  196 (286)
T PRK14184        139 CTPAGVMTLLERYGLSPAGKKAVVVGRSN--IVGKPLALMLGAPGKFANATVTVCHSRT--------------------P  196 (286)
T ss_pred             CCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhCCcccCCCEEEEEeCCc--------------------h
Confidence            366666653     344678999999998  999999999998    7888888 1111                    0


Q ss_pred             cccc--CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc--CCCCCee
Q 011973          355 SYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCF  400 (474)
Q Consensus       355 ~~~~--~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~--~~R~dc~  400 (474)
                      ++++  +.+||+|  +|  +.++++..   ++|++++|+. +++.  ++--|+-
T Consensus       197 ~l~~~~~~ADIVI~AvG~p~li~~~~v---k~GavVIDVG-i~~~~~~l~GDVd  246 (286)
T PRK14184        197 DLAEECREADFLFVAIGRPRFVTADMV---KPGAVVVDVG-INRTDDGLVGDCD  246 (286)
T ss_pred             hHHHHHHhCCEEEEecCCCCcCCHHHc---CCCCEEEEee-eeccCCCccCCcc
Confidence            1121  4556655  33  34677666   9999999999 7763  4445554

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.51  E-value=0.35  Score=49.54  Aligned_cols=103  Identities=18%  Similarity=0.241  Sum_probs=67.4

Q ss_pred             HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973          286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-  358 (474)
Q Consensus       286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-  358 (474)
                      |++.|++=+     +-.-++|+++|...  -||+-+|..|.+++-.|++ .++-  .                  ++++ 
T Consensus       140 Tp~avi~ll~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~AtVtichs~T--~------------------nl~~~  197 (282)
T PRK14182        140 TPAGVMRMLDEARVDPKGKRALVVGRSN--IVGKPMAMMLLERHATVTIAHSRT--A------------------DLAGE  197 (282)
T ss_pred             CHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--C------------------CHHHH
Confidence            666666543     44688999999998  9999999999999999998 2111  0                  1111 


Q ss_pred             -CceeEEE--EcC--cCChhhhhcCCCCceeecccccCcc---CCCCCeeeec-----CCccccCCCCc
Q 011973          359 -HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAMIIPPSLS  414 (474)
Q Consensus       359 -~~~~vwi--vg~--~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~y~~-----~~am~vP~~~~  414 (474)
                       +.+||+|  +|+  .++++..   ++|+++||+. +.+.   ++.-|+-+.+     ...+.||+.+-
T Consensus       198 ~~~ADIvI~AvGk~~~i~~~~i---k~gaiVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iTPVPGGVG  262 (282)
T PRK14182        198 VGRADILVAAIGKAELVKGAWV---KEGAVVIDVG-MNRLADGKLVGDVEFAAAAARASAITPVPGGVG  262 (282)
T ss_pred             HhhCCEEEEecCCcCccCHHHc---CCCCEEEEee-ceecCCCCeeCCCCHHHHHhhccEecCCCCCCh
Confidence             3566666  342  4666655   9999999998 6662   4445654322     22244666543

>PRK07023 short chain dehydrogenase; Provisional

Probab=91.50  E-value=0.21  Score=47.56  Aligned_cols=33  Identities=24%  Similarity=0.336  Sum_probs=29.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      ..|+++|++|  -||+++|+.|+++|.+|++  |+.+
T Consensus         2 ~~vlItGasg--giG~~ia~~l~~~G~~v~~~~r~~~   36 (243)
T PRK07023          2 VRAIVTGHSR--GLGAALAEQLLQPGIAVLGVARSRH   36 (243)
T ss_pred             ceEEEecCCc--chHHHHHHHHHhCCCEEEEEecCcc
Confidence            3689999998  9999999999999999988  6544

>PRK07201 short chain dehydrogenase; Provisional

Probab=91.50  E-value=0.24  Score=54.54  Aligned_cols=43  Identities=21%  Similarity=0.278  Sum_probs=38.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++
T Consensus       371 ~k~vlItGas~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~  415 (657)
T PRK07201        371 GKVVLITGASS--GIGRATAIKVAEAGATVFLVARNGEALDELVAEI  415 (657)
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  8888888887775

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.42  E-value=0.41  Score=49.00  Aligned_cols=90  Identities=20%  Similarity=0.197  Sum_probs=62.3

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973          285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  358 (474)
Q Consensus       285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~  358 (474)
                      -|+..|++=+     +-.-++|+++|.+.  -||+-+|..|.++|..|++ .++-  .                  ++++
T Consensus       140 cTp~aii~lL~~y~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~ATVt~chs~T--~------------------dl~~  197 (282)
T PRK14180        140 CTPKGIMTMLREYGIKTEGAYAVVVGASN--VVGKPVSQLLLNAKATVTTCHRFT--T------------------DLKS  197 (282)
T ss_pred             CCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEEcCCC--C------------------CHHH
Confidence            3566655543     44688999999998  9999999999999999999 2111  0                  1111


Q ss_pred             --CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc--CCCCCee
Q 011973          359 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCF  400 (474)
Q Consensus       359 --~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~--~~R~dc~  400 (474)
                        +.+||+|  +|  +.++++..   ++|+++||+. ++..  ++.-|+-
T Consensus       198 ~~k~ADIvIsAvGkp~~i~~~~v---k~gavVIDvG-in~~~gkl~GDvd  243 (282)
T PRK14180        198 HTTKADILIVAVGKPNFITADMV---KEGAVVIDVG-INHVDGKIVGDVD  243 (282)
T ss_pred             HhhhcCEEEEccCCcCcCCHHHc---CCCcEEEEec-ccccCCceeCCcC
Confidence              3556655  34  34777666   9999999998 6652  5556665

>TIGR00936 ahcY adenosylhomocysteinase

Probab=91.38  E-value=1  Score=48.29  Aligned_cols=157  Identities=13%  Similarity=0.104  Sum_probs=92.5

Q ss_pred             ceeeecCChhHHHHHHhcC--cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccccee
Q 011973          276 KIKVVDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV  351 (474)
Q Consensus       276 ~irvv~GnsltaAvvl~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~  351 (474)
                      +-|.=+|.|.. -.+++..  ....++|+|+|.-   .||+.+|+.|...|.+|+.  +++.+......   .+.  .  
T Consensus       172 Dn~yg~g~s~~-~~i~r~t~~~l~Gk~VvViG~G---~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~---~G~--~--  240 (406)
T TIGR00936       172 DNRYGTGQSTI-DGILRATNLLIAGKTVVVAGYG---WCGKGIAMRARGMGARVIVTEVDPIRALEAAM---DGF--R--  240 (406)
T ss_pred             hcccccchhHH-HHHHHhcCCCCCcCEEEEECCC---HHHHHHHHHHhhCcCEEEEEeCChhhHHHHHh---cCC--E--
Confidence            34666777744 3344443  3456799999976   8999999999999999988  45544322211   111  1  


Q ss_pred             eecccc-c-CceeEEEE----cCcCChhhhhcCCCCceeecccccCcc--------------CCCCCee---eecCCcc-
Q 011973          352 LSTSYA-A-HKTKIWLV----GDDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCF---YHSTPAM-  407 (474)
Q Consensus       352 ~~t~~~-~-~~~~vwiv----g~~i~~~eq~~a~~G~~f~~~~~v~p~--------------~~R~dc~---y~~~~am-  407 (474)
                       +.+.+ + +.++++|.    -..++.+....+++|++++-+.+++.+              +.|.-..   .+++-.+ 
T Consensus       241 -v~~leeal~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~~eId~~aL~~~~~~~~~~~~~v~~~~~~~g~~i~  319 (406)
T TIGR00936       241 -VMTMEEAAKIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFDVEIDVKALEELAVEKRNVRPQVDEYILKDGRRIY  319 (406)
T ss_pred             -eCCHHHHHhcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCCceeCHHHHHHHHhhccccccceEEEEeCCCCEEE
Confidence             11222 2 56677662    234566677889999999998886541              2332111   1111111 


Q ss_pred             cc-CCCCccccccccccCcchhHHHHHhhhhhhhcCCCC
Q 011973          408 II-PPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDL  445 (474)
Q Consensus       408 ~v-P~~~~~~~~~e~~~prr~~~Ac~a~~~v~alEgw~~  445 (474)
                      .+ -+..-|+- |..+.|..+|.--+|-=.+-+++=|.+
T Consensus       320 ll~~GrlvNl~-~~~ghp~~vmd~sfa~q~la~~~l~~~  357 (406)
T TIGR00936       320 LLAEGRLVNLA-AAEGHPSEVMDMSFANQALAAEYLWKN  357 (406)
T ss_pred             EEeCCceeccc-CCCCCcceeeCHHHHHHHHHHHHHHhc
Confidence            11 11355566 788899999976665544444444443

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PLN02778 3,5-epimerase/4-reductase

Probab=91.35  E-value=0.37  Score=48.59  Aligned_cols=36  Identities=17%  Similarity=0.189  Sum_probs=31.2

Q ss_pred             hcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          292 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       292 ~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ++.|+ .+.+|+|+|++|  =||+.+++.|.++|.+|+.
T Consensus         2 ~~~~~~~~~kiLVtG~tG--fiG~~l~~~L~~~g~~V~~   38 (298)
T PLN02778          2 NGTAGSATLKFLIYGKTG--WIGGLLGKLCQEQGIDFHY   38 (298)
T ss_pred             CCCCCCCCCeEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence            45666 356899999999  9999999999999999975

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=91.27  E-value=0.42  Score=39.49  Aligned_cols=59  Identities=17%  Similarity=0.229  Sum_probs=43.8

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccC---cEEEe---cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMG---IKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV  366 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~---v~v~l---~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv  366 (474)
                      +|.++|+-   ++|.|+++.|.+.|   .++.+   |++++.++++++.+.+.    . ..+++ . +.++++|+
T Consensus         1 kI~iIG~G---~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~----~-~~~~~~~~~~advvil   67 (96)
T PF03807_consen    1 KIGIIGAG---NMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQA----T-ADDNEEAAQEADVVIL   67 (96)
T ss_dssp             EEEEESTS---HHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEE----E-SEEHHHHHHHTSEEEE
T ss_pred             CEEEECCC---HHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccc----c-cCChHHhhccCCEEEE
Confidence            46778665   99999999999999   88885   99999999999977332    1 11343 3 66777663

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=91.24  E-value=0.28  Score=49.13  Aligned_cols=83  Identities=17%  Similarity=0.260  Sum_probs=55.9

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--EcCc--CC-
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VGDD--LT-  371 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg~~--i~-  371 (474)
                      |.++|. |  .+|+++|+.|++.|.+|++  |++++.+.+++. +.      ...++.+ . ++++++|  +-+.  +. 
T Consensus         2 IgvIG~-G--~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~-g~------~~~~~~~~~~~~aDivi~~vp~~~~~~~   71 (291)
T TIGR01505         2 VGFIGL-G--IMGSPMSINLAKAGYQLHVTTIGPEVADELLAA-GA------VTAETARQVTEQADVIFTMVPDSPQVEE   71 (291)
T ss_pred             EEEEEe-c--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CC------cccCCHHHHHhcCCEEEEecCCHHHHHH
Confidence            778886 4  9999999999999999998  888888887754 11      1122332 2 5666644  2221  11 


Q ss_pred             ---h-hh-hhcCCCCceeecccccCcc
Q 011973          372 ---G-KE-QARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       372 ---~-~e-q~~a~~G~~f~~~~~v~p~  393 (474)
                         . +. ...+++|+++++.|.++|.
T Consensus        72 v~~~~~~~~~~~~~g~iivd~st~~~~   98 (291)
T TIGR01505        72 VAFGENGIIEGAKPGKTLVDMSSISPI   98 (291)
T ss_pred             HHcCcchHhhcCCCCCEEEECCCCCHH
Confidence               1 11 2346899999999998885

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=91.23  E-value=0.4  Score=45.59  Aligned_cols=30  Identities=17%  Similarity=0.320  Sum_probs=27.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+
T Consensus         3 ~k~~lVtG~s~--giG~~~a~~l~~~G~~vv~   32 (246)
T PRK12938          3 QRIAYVTGGMG--GIGTSICQRLHKDGFKVVA   32 (246)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHcCCEEEE
Confidence            36789999998  9999999999999999887

>TIGR00658 orni_carb_tr ornithine carbamoyltransferase

Probab=91.20  E-value=2.5  Score=43.51  Aligned_cols=158  Identities=19%  Similarity=0.256  Sum_probs=95.3

Q ss_pred             HHHcCCcEEEeccc----cccccc-------cccCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 011973          241 ADAKGVKVISLGLL----NQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  291 (474)
Q Consensus       241 A~k~G~kV~~LG~l----n~~e~l-------n~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvvl  291 (474)
                      |.++|++++.|+.=    +++|.+       ....-+.+.|+|+         ..++.|+.+.+         +=..++.
T Consensus        61 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~  140 (304)
T TIGR00658        61 AYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRYVDGIMARVYKHEDVEELAKYASVPVINGLTDLFHPCQALADLLTII  140 (304)
T ss_pred             HHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence            45699999999643    335543       5566678888887         35677777543         1134555


Q ss_pred             hcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHH---HHHhhC---ccccccceeeec-ccc-c-Cce
Q 011973          292 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRI---PVEAQHNLVLST-SYA-A-HKT  361 (474)
Q Consensus       292 ~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~---~l~~~~---~~~~~~~l~~~t-~~~-~-~~~  361 (474)
                      +.... +..+|.++|..+  .+.+..+.+|.+-|++|.+-.++.|+   .+.+++   ..+.+.. +..+ +.+ + +++
T Consensus       141 e~~g~l~g~~v~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~~a  217 (304)
T TIGR00658       141 EHFGKLKGVKVVYVGDGN--NVCNSLMLAGAKLGMDVVVATPEGYEPDADIVKKAQEIAKENGGS-VELTHDPVEAVKGA  217 (304)
T ss_pred             HHhCCCCCcEEEEEeCCC--chHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCe-EEEEcCHHHHhCCC
Confidence            54432 456899999986  89999999999999999993333332   111111   1112223 2233 334 4 888


Q ss_pred             eEEEEcCcCChh------hhhcCCCCceeecccccCcc---CCCCCee-eecCCcc
Q 011973          362 KIWLVGDDLTGK------EQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM  407 (474)
Q Consensus       362 ~vwivg~~i~~~------eq~~a~~G~~f~~~~~v~p~---~~R~dc~-y~~~~am  407 (474)
                      +|+.+..|....      +....     +-+| +++.+   ..|+|+. .|.+|+.
T Consensus       218 Dvvy~~~w~~~~~~~~~~~~~~~-----~~~y-~l~~~~l~~~~~~~ivmHplP~~  267 (304)
T TIGR00658       218 DVIYTDVWVSMGEEDKKEERLKL-----FRPY-QVNEELMELAKPEVIFMHCLPAH  267 (304)
T ss_pred             CEEEEcCcccCccccccHHHHHH-----hcCC-cCCHHHHhhcCCCCEEECCCCCC
Confidence            887775554211      11111     2234 37777   5678886 5888874

Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.20  E-value=0.37  Score=49.45  Aligned_cols=81  Identities=22%  Similarity=0.281  Sum_probs=57.1

Q ss_pred             HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973          286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-  358 (474)
Q Consensus       286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-  358 (474)
                      |+..|++=+     +-.-++|+|+|.+.  -||+-+|..|.++|-.|++ .++-+                    ++++ 
T Consensus       138 Tp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVtichs~T~--------------------~l~~~  195 (287)
T PRK14173        138 TPAGVVRLLKHYGIPLAGKEVVVVGRSN--IVGKPLAALLLREDATVTLAHSKTQ--------------------DLPAV  195 (287)
T ss_pred             CHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEeCCCCC--------------------CHHHH
Confidence            566666544     33578999999998  9999999999999999998 11110                    1111 


Q ss_pred             -CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973          359 -HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       359 -~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                       +.+||+|  +|  .-++++..   ++|+++||+. +++
T Consensus       196 ~~~ADIvIsAvGkp~~i~~~~v---k~GavVIDVG-in~  230 (287)
T PRK14173        196 TRRADVLVVAVGRPHLITPEMV---RPGAVVVDVG-INR  230 (287)
T ss_pred             HhhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-Ccc
Confidence             3555655  44  34666666   9999999998 554

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.16  E-value=0.43  Score=48.86  Aligned_cols=91  Identities=18%  Similarity=0.222  Sum_probs=62.8

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973          285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  358 (474)
Q Consensus       285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~  358 (474)
                      -|++.|++=+     +-.-++|+++|...  -||+-+|..|.++|..|++ .++-                    .++++
T Consensus       139 cTp~avi~lL~~y~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVt~chs~T--------------------~nl~~  196 (282)
T PRK14166        139 CTPLGVMKLLKAYEIDLEGKDAVIIGASN--IVGRPMATMLLNAGATVSVCHIKT--------------------KDLSL  196 (282)
T ss_pred             CCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--------------------CCHHH
Confidence            3566665544     34678999999998  9999999999999999998 2111                    01121


Q ss_pred             --CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCeee
Q 011973          359 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY  401 (474)
Q Consensus       359 --~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~y  401 (474)
                        +.+||+|  +|  +.++++..   ++|+++||+. +++.   ++--||-+
T Consensus       197 ~~~~ADIvIsAvGkp~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd~  244 (282)
T PRK14166        197 YTRQADLIIVAAGCVNLLRSDMV---KEGVIVVDVG-INRLESGKIVGDVDF  244 (282)
T ss_pred             HHhhCCEEEEcCCCcCccCHHHc---CCCCEEEEec-ccccCCCCeeCCCCH
Confidence              3566666  33  34777766   9999999998 6662   44466553

>PRK06523 short chain dehydrogenase; Provisional

Probab=91.16  E-value=0.26  Score=47.40  Aligned_cols=35  Identities=20%  Similarity=0.328  Sum_probs=30.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+++
T Consensus         8 ~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~r~~~   44 (260)
T PRK06523          8 AGKRALVTGGTK--GIGAATVARLLEAGARVVTTARSRP   44 (260)
T ss_pred             CCCEEEEECCCC--chhHHHHHHHHHCCCEEEEEeCChh
Confidence            357899999998  9999999999999999988  5543

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.14  E-value=0.39  Score=49.18  Aligned_cols=89  Identities=18%  Similarity=0.207  Sum_probs=61.9

Q ss_pred             HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973          286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-  358 (474)
Q Consensus       286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-  358 (474)
                      |+..|++=+     +-.-++|+++|...  -||+-+|..|.++|..|++ .++-              .      ++++ 
T Consensus       139 Tp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVtichs~T--------------~------~l~~~  196 (282)
T PRK14169        139 TPYGIMALLDAYDIDVAGKRVVIVGRSN--IVGRPLAGLMVNHDATVTIAHSKT--------------R------NLKQL  196 (282)
T ss_pred             CHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEECCCC--------------C------CHHHH
Confidence            566665544     44678999999998  9999999999999999998 1111              0      1111 


Q ss_pred             -CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCee
Q 011973          359 -HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF  400 (474)
Q Consensus       359 -~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~  400 (474)
                       +.+||+|  +|  ..++++..   ++|+++||+. +.+.   ++.-||-
T Consensus       197 ~~~ADIvI~AvG~p~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd  242 (282)
T PRK14169        197 TKEADILVVAVGVPHFIGADAV---KPGAVVIDVG-ISRGADGKLLGDVD  242 (282)
T ss_pred             HhhCCEEEEccCCcCccCHHHc---CCCcEEEEee-ccccCCCCeeecCc
Confidence             3556655  33  35777766   9999999998 6652   4445555

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=91.08  E-value=0.71  Score=50.93  Aligned_cols=44  Identities=14%  Similarity=0.105  Sum_probs=38.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+++|+.   -+|+|+|..|.+.|.+|.+  |+.++.++|.+++.
T Consensus       378 ~~k~vlIlGaG---GagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~  423 (529)
T PLN02520        378 AGKLFVVIGAG---GAGKALAYGAKEKGARVVIANRTYERAKELADAVG  423 (529)
T ss_pred             CCCEEEEECCc---HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence            45789999994   6999999999999999888  88899999988763

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=91.07  E-value=1.1  Score=48.35  Aligned_cols=101  Identities=18%  Similarity=0.141  Sum_probs=67.7

Q ss_pred             eeeecCChhHHHHHHhcCc--CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee
Q 011973          277 IKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL  352 (474)
Q Consensus       277 irvv~GnsltaAvvl~~ip--~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~  352 (474)
                      -|.=+|.|.. -.+++.+.  ...++|+|+|+-   .||+.+|+.|...|.+|++  +++.|.+..++ .+...    + 
T Consensus       180 n~~g~g~s~~-~~i~r~t~~~l~GktVvViG~G---~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-~G~~~----~-  249 (413)
T cd00401         180 NLYGCRESLI-DGIKRATDVMIAGKVAVVAGYG---DVGKGCAQSLRGQGARVIVTEVDPICALQAAM-EGYEV----M-  249 (413)
T ss_pred             ccchhchhhH-HHHHHhcCCCCCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-cCCEE----c-
Confidence            4555777753 44455443  357799999987   8999999999999999988  66667654433 22111    1 


Q ss_pred             ecccc-c-CceeEEE--Ec--CcCChhhhhcCCCCceeecccc
Q 011973          353 STSYA-A-HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQ  389 (474)
Q Consensus       353 ~t~~~-~-~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~  389 (474)
                        +.+ + +.++++|  .|  ..++.+....+++|.+++-+..
T Consensus       250 --~~~e~v~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~  290 (413)
T cd00401         250 --TMEEAVKEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGH  290 (413)
T ss_pred             --cHHHHHcCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCC
Confidence              222 2 4567766  33  3455566888999999987775

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=91.02  E-value=0.4  Score=45.14  Aligned_cols=41  Identities=20%  Similarity=0.247  Sum_probs=33.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-chhhHHHHHhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLR  341 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~~~~~~l~~~  341 (474)
                      +.++++|++|  -||+++|+.|+++|.+|++  | ++++.+++..+
T Consensus         1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~   44 (242)
T TIGR01829         1 RIALVTGGMG--GIGTAICQRLAKDGYRVAANCGPNEERAEAWLQE   44 (242)
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH
Confidence            4689999998  9999999999999999877  4 56666655444

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=91.00  E-value=0.51  Score=51.74  Aligned_cols=94  Identities=14%  Similarity=0.117  Sum_probs=60.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc-------------ccccc---ceeeec-ccc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEAQH---NLVLST-SYA  357 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~-------------~~~~~---~l~~~t-~~~  357 (474)
                      .-++|.|+|+ |  .+|+.||..|++.|++|++  ++++.+++..+.+.             .+...   ..+..+ +++
T Consensus         6 ~i~~V~VIGa-G--~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~   82 (507)
T PRK08268          6 SIATVAVIGA-G--AMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEALA   82 (507)
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHH
Confidence            4578999999 5  9999999999999999999  88888877432221             11111   112223 554


Q ss_pred             c-CceeEEE--EcCcCChhh-----hh-cCCCCceee-cccccCcc
Q 011973          358 A-HKTKIWL--VGDDLTGKE-----QA-RAPKGTIFI-PYTQIPPR  393 (474)
Q Consensus       358 ~-~~~~vwi--vg~~i~~~e-----q~-~a~~G~~f~-~~~~v~p~  393 (474)
                      + ++++++|  |-+.++-+.     +. -.|+++++. ..|-+|+.
T Consensus        83 ~~~~aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntStl~i~  128 (507)
T PRK08268         83 DLADCDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSLSIT  128 (507)
T ss_pred             HhCCCCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence            4 7777766  333333222     22 248999885 77777776

>PRK07791 short chain dehydrogenase; Provisional

Probab=90.94  E-value=0.36  Score=47.97  Aligned_cols=44  Identities=18%  Similarity=0.169  Sum_probs=36.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch---------hhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---------DDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~---------~~~~~l~~~~~  343 (474)
                      .+.++++|+++  -||+++|+.|+++|.+|.+  ++.         ++++++.+++.
T Consensus         6 ~k~~lITGas~--GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~   60 (286)
T PRK07791          6 GRVVIVTGAGG--GIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIV   60 (286)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHH
Confidence            46899999997  9999999999999999988  544         66777776653

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=90.90  E-value=0.87  Score=44.88  Aligned_cols=150  Identities=17%  Similarity=0.136  Sum_probs=84.1

Q ss_pred             EEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEc----CcC-C
Q 011973          302 LLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVG----DDL-T  371 (474)
Q Consensus       302 ~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg----~~i-~  371 (474)
                      ..+|.||  .||+++|+.|.+.|..|.+   |.++.++...+++...     +...+.+ + +.++|+++=    .+. .
T Consensus         4 ~~i~GtG--niG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~-----i~~~~~~dA~~~aDVVvLAVP~~a~~~v   76 (211)
T COG2085           4 IAIIGTG--NIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL-----ITGGSNEDAAALADVVVLAVPFEAIPDV   76 (211)
T ss_pred             EEEeccC--hHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc-----cccCChHHHHhcCCEEEEeccHHHHHhH
Confidence            4556677  9999999999999999999   6777788887775544     2223443 4 667776620    111 1


Q ss_pred             hhhhhcCCCCceeecccccCcc-CCCCCeeee---cCCcc-----ccCCCCccccccccccCcchhHHHHHhhhhhhhcC
Q 011973          372 GKEQARAPKGTIFIPYTQIPPR-KLRKDCFYH---STPAM-----IIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEG  442 (474)
Q Consensus       372 ~~eq~~a~~G~~f~~~~~v~p~-~~R~dc~y~---~~~am-----~vP~~~~~~~~~e~~~prr~~~Ac~a~~~v~alEg  442 (474)
                      .+|.+.+-.|.++||.. +|-. ..++-=+|.   ++.+.     .+|++ +-+..+|+ +|         ++.+..+..
T Consensus        77 ~~~l~~~~~~KIvID~t-np~~~~~~~~~~~~~~~~~saae~va~~lp~a-kVVkAFn~-i~---------a~~l~~~~~  144 (211)
T COG2085          77 LAELRDALGGKIVIDAT-NPIEVNGEPGDLYLVPSEGSAAEIVAKLLPGA-KVVKAFNT-IP---------AAVLADLAK  144 (211)
T ss_pred             HHHHHHHhCCeEEEecC-CCccccCCccccccCCCCCcHHHHHHHHCCCc-chhhhhcc-cC---------HHHhccCCC
Confidence            34444445578888887 5532 444333332   33321     24444 11111111 11         112222222


Q ss_pred             CC-CC---ccchhhhhHHHHHHHHHhCCCccC
Q 011973          443 WD-LN---ECGQTMCDIHQVWHASLRHGFRPL  470 (474)
Q Consensus       443 w~-~~---e~G~iv~~id~iw~aa~kHGF~p~  470 (474)
                      .. ..   =||+-.+...++.+++.+-||+|+
T Consensus       145 ~~~~~~v~vagDD~~Ak~~v~~L~~~iG~~~l  176 (211)
T COG2085         145 PGGRRDVLVAGDDAEAKAVVAELAEDIGFRPL  176 (211)
T ss_pred             cCCceeEEEecCcHHHHHHHHHHHHhcCccee
Confidence            11 00   133334677889999999999994

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.81  E-value=0.34  Score=46.02  Aligned_cols=30  Identities=23%  Similarity=0.320  Sum_probs=27.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.|+++|++|  .||+++|+.|+++|.++.+
T Consensus         6 ~~~vlitGasg--~iG~~l~~~l~~~g~~v~~   35 (252)
T PRK06077          6 DKVVVVTGSGR--GIGRAIAVRLAKEGSLVVV   35 (252)
T ss_pred             CcEEEEeCCCC--hHHHHHHHHHHHCCCEEEE
Confidence            36899999998  9999999999999999876

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.80  E-value=0.58  Score=48.04  Aligned_cols=81  Identities=15%  Similarity=0.197  Sum_probs=55.9

Q ss_pred             HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973          286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-  358 (474)
Q Consensus       286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-  358 (474)
                      |++.|++-+     +-.-++|+|+|...  -||+-+|..|.++|-.|++ .++-  .                  ++++ 
T Consensus       147 Tp~av~~ll~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVtv~hs~T--~------------------~l~~~  204 (287)
T PRK14176        147 TPHGVIRALEEYGVDIEGKNAVIVGHSN--VVGKPMAAMLLNRNATVSVCHVFT--D------------------DLKKY  204 (287)
T ss_pred             cHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCEEEEEeccC--C------------------CHHHH
Confidence            555555544     34678999999997  8999999999999999999 2110  0                  1111 


Q ss_pred             -CceeEEEE--cC--cCChhhhhcCCCCceeecccccCc
Q 011973          359 -HKTKIWLV--GD--DLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       359 -~~~~vwiv--g~--~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                       +.++|+|+  |+  .++++   +.++|++++|+. +..
T Consensus       205 ~~~ADIvv~AvG~p~~i~~~---~vk~gavVIDvG-in~  239 (287)
T PRK14176        205 TLDADILVVATGVKHLIKAD---MVKEGAVIFDVG-ITK  239 (287)
T ss_pred             HhhCCEEEEccCCccccCHH---HcCCCcEEEEec-ccc
Confidence             35556553  43  45555   459999999998 554

>PRK12744 short chain dehydrogenase; Provisional

Probab=90.77  E-value=0.34  Score=46.65  Aligned_cols=30  Identities=23%  Similarity=0.368  Sum_probs=26.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+
T Consensus         8 ~k~vlItGa~~--gIG~~~a~~l~~~G~~vv~   37 (257)
T PRK12744          8 GKVVLIAGGAK--NLGGLIARDLAAQGAKAVA   37 (257)
T ss_pred             CcEEEEECCCc--hHHHHHHHHHHHCCCcEEE
Confidence            36899999998  9999999999999999554

>PRK06398 aldose dehydrogenase; Validated

Probab=90.66  E-value=0.29  Score=47.56  Aligned_cols=34  Identities=21%  Similarity=0.274  Sum_probs=29.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|++  |+++
T Consensus         6 gk~vlItGas~--gIG~~ia~~l~~~G~~Vi~~~r~~~   41 (258)
T PRK06398          6 DKVAIVTGGSQ--GIGKAVVNRLKEEGSNVINFDIKEP   41 (258)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCcc
Confidence            36899999998  9999999999999999998  5543

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=90.55  E-value=0.53  Score=47.29  Aligned_cols=92  Identities=12%  Similarity=0.055  Sum_probs=56.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc-------------ccc---ccceeeec-cccc-
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEA---QHNLVLST-SYAA-  358 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~-------------~~~---~~~l~~~t-~~~~-  358 (474)
                      ++|.++|+-   .+|+++|..|++.|.+|.+  ++.+++++.++++.             .+.   ....+..+ ++++ 
T Consensus         5 ~~V~vIG~G---~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   81 (295)
T PLN02545          5 KKVGVVGAG---QMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEEL   81 (295)
T ss_pred             CEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHh
Confidence            569999986   9999999999999999999  77777764333211             100   00112223 3344 


Q ss_pred             CceeEEEE--cCcCChhh------hhcCCCCceee-cccccCcc
Q 011973          359 HKTKIWLV--GDDLTGKE------QARAPKGTIFI-PYTQIPPR  393 (474)
Q Consensus       359 ~~~~vwiv--g~~i~~~e------q~~a~~G~~f~-~~~~v~p~  393 (474)
                      ++++++|.  -+..+-+.      ...++++++++ ..|-+++.
T Consensus        82 ~~aD~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~i~~~  125 (295)
T PLN02545         82 RDADFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSSISIT  125 (295)
T ss_pred             CCCCEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence            77777663  11111111      12478898886 66667666

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.46  E-value=0.61  Score=44.92  Aligned_cols=32  Identities=25%  Similarity=0.340  Sum_probs=27.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.|+++|++|.+-||+++|+.|.++|.+|++
T Consensus         5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~   36 (256)
T PRK12748          5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFF   36 (256)
T ss_pred             CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEE
Confidence            36799999994236999999999999999988

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=90.40  E-value=0.42  Score=51.12  Aligned_cols=38  Identities=24%  Similarity=0.263  Sum_probs=32.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  337 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~  337 (474)
                      .++|+++||+|  -||+++|+.|+++|.+|.+  |++++++.
T Consensus       178 gK~VLITGASg--GIG~aLA~~La~~G~~Vi~l~r~~~~l~~  217 (406)
T PRK07424        178 GKTVAVTGASG--TLGQALLKELHQQGAKVVALTSNSDKITL  217 (406)
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            46899999998  9999999999999999987  66666543

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=90.31  E-value=1.2  Score=45.66  Aligned_cols=141  Identities=11%  Similarity=0.099  Sum_probs=77.7

Q ss_pred             HcCCcEEEeccccccccccccC-ceeeecCCCCccee----eecCChhHHHHHHhcC--cCCCcEEEEeccCCCchhHHH
Q 011973          243 AKGVKVISLGLLNQGEELNRNG-EIYLERQPNKLKIK----VVDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANA  315 (474)
Q Consensus       243 k~G~kV~~LG~ln~~e~ln~~g-~l~v~k~p~~L~ir----vv~GnsltaAvvl~~i--p~~~~~V~l~Gatg~~kig~a  315 (474)
                      +-|-+|+++|.+.+.-.+..+. .+...+-|+++...    ..--+.+||+..+...  .+....|++.|++|  -||.+
T Consensus        97 ~~Gd~V~~~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG--~vG~~  174 (348)
T PLN03154         97 KPGDLISGITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASG--AVGQL  174 (348)
T ss_pred             CCCCEEEecCCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHH
Confidence            4577777777655421111111 12222224423211    1112445555555332  23457899999998  99999


Q ss_pred             HHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec---ccc-c------CceeEEE--EcCcCChhhhhcCCCC
Q 011973          316 VASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST---SYA-A------HKTKIWL--VGDDLTGKEQARAPKG  381 (474)
Q Consensus       316 va~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t---~~~-~------~~~~vwi--vg~~i~~~eq~~a~~G  381 (474)
                      +++.+...|.+|..  ++.++.+.++++++.+.   ++..+   +.. .      ...++++  +|.....+-...+.+|
T Consensus       175 aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~---vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~  251 (348)
T PLN03154        175 VGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE---AFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIH  251 (348)
T ss_pred             HHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCE---EEECCCcccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhccC
Confidence            99988899999876  78888888876665433   33221   111 1      1345555  4433333344456666


Q ss_pred             ceeeccc
Q 011973          382 TIFIPYT  388 (474)
Q Consensus       382 ~~f~~~~  388 (474)
                      -.++-+.
T Consensus       252 G~iv~~G  258 (348)
T PLN03154        252 GRIAVCG  258 (348)
T ss_pred             CEEEEEC
Confidence            6676665

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=90.26  E-value=0.31  Score=47.10  Aligned_cols=34  Identities=18%  Similarity=0.272  Sum_probs=30.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      .+.|+++|++|  -||+++|+.|.++|.+|++  ++.+
T Consensus         9 ~k~vlItG~s~--gIG~~la~~l~~~G~~v~~~~~~~~   44 (266)
T PRK06171          9 GKIIIVTGGSS--GIGLAIVKELLANGANVVNADIHGG   44 (266)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            46799999998  9999999999999999998  5444

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=90.19  E-value=0.5  Score=44.46  Aligned_cols=79  Identities=13%  Similarity=0.211  Sum_probs=46.3

Q ss_pred             HHHHHHhc-----CcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc
Q 011973          286 AAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  358 (474)
Q Consensus       286 taAvvl~~-----ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~  358 (474)
                      |+..+++=     ++..-++|+|+|...  -||+-++..|.++|..|++  .+.+.+++.-                   
T Consensus        19 Tp~aii~lL~~~~~~l~Gk~v~VvGrs~--~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~-------------------   77 (160)
T PF02882_consen   19 TPLAIIELLEYYGIDLEGKKVVVVGRSN--IVGKPLAMLLLNKGATVTICHSKTKNLQEIT-------------------   77 (160)
T ss_dssp             HHHHHHHHHHHTT-STTT-EEEEE-TTT--TTHHHHHHHHHHTT-EEEEE-TTSSSHHHHH-------------------
T ss_pred             CHHHHHHHHHhcCCCCCCCEEEEECCcC--CCChHHHHHHHhCCCeEEeccCCCCccccee-------------------
Confidence            45555443     345678999999997  9999999999999999999  1111111110                   


Q ss_pred             CceeEEEEcCc----CChhhhhcCCCCceeeccc
Q 011973          359 HKTKIWLVGDD----LTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       359 ~~~~vwivg~~----i~~~eq~~a~~G~~f~~~~  388 (474)
                      +.+||+|+.-+    |+++   |.++|+++||+.
T Consensus        78 ~~ADIVVsa~G~~~~i~~~---~ik~gavVIDvG  108 (160)
T PF02882_consen   78 RRADIVVSAVGKPNLIKAD---WIKPGAVVIDVG  108 (160)
T ss_dssp             TTSSEEEE-SSSTT-B-GG---GS-TTEEEEE--
T ss_pred             eeccEEeeeeccccccccc---cccCCcEEEecC
Confidence            35566663322    3333   458899999887

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=90.18  E-value=0.78  Score=48.66  Aligned_cols=125  Identities=14%  Similarity=0.143  Sum_probs=78.6

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--c---------cccceeeeccc-cc-CceeEE
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--E---------AQHNLVLSTSY-AA-HKTKIW  364 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~--~---------~~~~l~~~t~~-~~-~~~~vw  364 (474)
                      +|.|+|..   -+|..+|..|++ |.+|+.  +++++.+++++....  +         ....+...++. ++ ++++++
T Consensus         2 kI~VIGlG---yvGl~~A~~lA~-G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~v   77 (388)
T PRK15057          2 KITISGTG---YVGLSNGLLIAQ-NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYV   77 (388)
T ss_pred             EEEEECCC---HHHHHHHHHHHh-CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEE
Confidence            58889876   899999987775 999998  899999999885321  0         11122112223 23 666664


Q ss_pred             E--EcCcCChh--------------hhhcCCCCceeecccccCcc---CCCCCe---eeecCCccccCCCCccccccccc
Q 011973          365 L--VGDDLTGK--------------EQARAPKGTIFIPYTQIPPR---KLRKDC---FYHSTPAMIIPPSLSNMHSCENW  422 (474)
Q Consensus       365 i--vg~~i~~~--------------eq~~a~~G~~f~~~~~v~p~---~~R~dc---~y~~~~am~vP~~~~~~~~~e~~  422 (474)
                      |  |++.++.+              +...+++|.+++.-|-+||.   ++++..   -...+|....|++.-    -++-
T Consensus        78 ii~Vpt~~~~k~~~~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgtt~~l~~~~~~~~v~~~PE~l~~G~a~----~d~~  153 (388)
T PRK15057         78 IIATPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAMHKKYRTENIIFSPEFLREGKAL----YDNL  153 (388)
T ss_pred             EEeCCCCCccCCCCcChHHHHHHHHHHHhcCCCCEEEEeeecCCchHHHHHHHhhcCcEEECcccccCCccc----cccc
Confidence            4  66554432              22345899999999999998   332221   123366666666532    2355


Q ss_pred             cCcchhHHHH
Q 011973          423 LGRRVMSAWR  432 (474)
Q Consensus       423 ~prr~~~Ac~  432 (474)
                      .|+|+|.+|-
T Consensus       154 ~p~rvv~G~~  163 (388)
T PRK15057        154 HPSRIVIGER  163 (388)
T ss_pred             CCCEEEEEcC
Confidence            6888877643

>PRK06940 short chain dehydrogenase; Provisional

Probab=90.17  E-value=0.45  Score=46.93  Aligned_cols=41  Identities=20%  Similarity=0.261  Sum_probs=33.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +.|+++|+ |  -||+++|+.|+ +|.+|.+  |+.++++++.+++.
T Consensus         3 k~~lItGa-~--gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~   45 (275)
T PRK06940          3 EVVVVIGA-G--GIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLR   45 (275)
T ss_pred             CEEEEECC-C--hHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHH
Confidence            46788887 5  79999999997 7999998  88888887776654

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=90.13  E-value=0.92  Score=46.29  Aligned_cols=92  Identities=14%  Similarity=0.106  Sum_probs=59.5

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc-----ccc--cceeeecccc-c-CceeEEE--
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-----EAQ--HNLVLSTSYA-A-HKTKIWL--  365 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~-----~~~--~~l~~~t~~~-~-~~~~vwi--  365 (474)
                      .+|.++|+-   .+|.++|..|++.|.+|++  |++++.+.+++....     +..  .++...++.+ + ++++++|  
T Consensus         5 m~I~iIG~G---~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~   81 (328)
T PRK14618          5 MRVAVLGAG---AWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVA   81 (328)
T ss_pred             CeEEEECcC---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEE
Confidence            479999986   8999999999999999999  888888888764211     110  1111122443 2 5666655  


Q ss_pred             EcCcCChhhhhcCCCCceeecccc-cCcc
Q 011973          366 VGDDLTGKEQARAPKGTIFIPYTQ-IPPR  393 (474)
Q Consensus       366 vg~~i~~~eq~~a~~G~~f~~~~~-v~p~  393 (474)
                      +-..-..+-...+++++.++.++. +.|.
T Consensus        82 v~~~~~~~v~~~l~~~~~vi~~~~Gi~~~  110 (328)
T PRK14618         82 VPSKALRETLAGLPRALGYVSCAKGLAPD  110 (328)
T ss_pred             CchHHHHHHHHhcCcCCEEEEEeeccccC
Confidence            222222233345688999999887 6654

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.09  E-value=0.55  Score=48.27  Aligned_cols=90  Identities=21%  Similarity=0.219  Sum_probs=62.5

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973          285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  358 (474)
Q Consensus       285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~  358 (474)
                      -|++.|++=+     +-.-++|+++|...  -||+-+|..|.++|-.|++ .++-              .      ++++
T Consensus       141 cTp~av~~lL~~y~i~l~GK~vvViGrS~--iVGkPla~lL~~~~ATVtichs~T--------------~------~L~~  198 (288)
T PRK14171        141 CTALGCLAVIKKYEPNLTGKNVVIIGRSN--IVGKPLSALLLKENCSVTICHSKT--------------H------NLSS  198 (288)
T ss_pred             CCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--------------C------CHHH
Confidence            4666665544     34578999999998  9999999999999999998 2111              0      1121


Q ss_pred             --CceeEEE--EcC--cCChhhhhcCCCCceeecccccCcc---CCCCCee
Q 011973          359 --HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF  400 (474)
Q Consensus       359 --~~~~vwi--vg~--~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~  400 (474)
                        +.+||+|  +|+  .++++..   ++|+++||+. +.+.   ++.-|+-
T Consensus       199 ~~~~ADIvV~AvGkp~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd  245 (288)
T PRK14171        199 ITSKADIVVAAIGSPLKLTAEYF---NPESIVIDVG-INRISGNKIIGDVD  245 (288)
T ss_pred             HHhhCCEEEEccCCCCccCHHHc---CCCCEEEEee-ccccCCCCeECCcc
Confidence              3566666  443  4676666   9999999998 7663   4446655

>PRK06701 short chain dehydrogenase; Provisional

Probab=90.03  E-value=0.44  Score=47.50  Aligned_cols=43  Identities=23%  Similarity=0.347  Sum_probs=33.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~-~~~~~l~~~~  342 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+. ++.+.+.+++
T Consensus        46 ~k~iLItGasg--gIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~   91 (290)
T PRK06701         46 GKVALITGGDS--GIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRV   91 (290)
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence            46899999998  9999999999999999988  543 3445554443

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.01  E-value=0.53  Score=48.53  Aligned_cols=81  Identities=16%  Similarity=0.202  Sum_probs=57.3

Q ss_pred             HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973          286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-  358 (474)
Q Consensus       286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-  358 (474)
                      |+..|++=+     +-.-++|+++|.+.  -||+-+|..|.++|..|++ .++-+                    ++++ 
T Consensus       141 Tp~aii~lL~~~~i~l~Gk~vvVIGrS~--iVGkPla~lL~~~~atVtv~hs~T~--------------------~l~~~  198 (297)
T PRK14186        141 TPAGVMRLLRSQQIDIAGKKAVVVGRSI--LVGKPLALMLLAANATVTIAHSRTQ--------------------DLASI  198 (297)
T ss_pred             CHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCCCC--------------------CHHHH
Confidence            566665544     34578999999998  9999999999999999998 21110                    1111 


Q ss_pred             -CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973          359 -HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       359 -~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                       +.+||+|  +|  ..++++..   ++|+++||+. +.+
T Consensus       199 ~~~ADIvIsAvGkp~~i~~~~i---k~gavVIDvG-in~  233 (297)
T PRK14186        199 TREADILVAAAGRPNLIGAEMV---KPGAVVVDVG-IHR  233 (297)
T ss_pred             HhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence             3566666  34  34666666   9999999998 554

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.95  E-value=0.85  Score=46.82  Aligned_cols=82  Identities=16%  Similarity=0.179  Sum_probs=57.1

Q ss_pred             hHHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973          285 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  358 (474)
Q Consensus       285 ltaAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~  358 (474)
                      -|++.|++-+.     -.-++|+|+|...  -||+-+|..|.++|-.|++ .++-  .                  ++++
T Consensus       141 cTp~av~~ll~~~~i~l~Gk~vvViGrs~--iVG~Pla~lL~~~~atVtv~hs~T--~------------------~l~~  198 (285)
T PRK10792        141 CTPRGIMTLLERYGIDTYGLNAVVVGASN--IVGRPMSLELLLAGCTVTVCHRFT--K------------------NLRH  198 (285)
T ss_pred             CCHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCeEEEEECCC--C------------------CHHH
Confidence            36666666553     3578999999997  8999999999999999999 2110  0                  1111


Q ss_pred             --CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973          359 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       359 --~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                        +.++|+|  +|  +.++++..   ++|++++|+. +++
T Consensus       199 ~~~~ADIvi~avG~p~~v~~~~v---k~gavVIDvG-in~  234 (285)
T PRK10792        199 HVRNADLLVVAVGKPGFIPGEWI---KPGAIVIDVG-INR  234 (285)
T ss_pred             HHhhCCEEEEcCCCcccccHHHc---CCCcEEEEcc-ccc
Confidence              3555655  32  34666544   9999999998 655

>PRK08309 short chain dehydrogenase; Provisional

Probab=89.95  E-value=0.6  Score=44.19  Aligned_cols=41  Identities=24%  Similarity=0.344  Sum_probs=33.9

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .|+++|+||   +|.++++.|+++|.+|.+  |++++.+.++.+++
T Consensus         2 ~vlVtGGtG---~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~   44 (177)
T PRK08309          2 HALVIGGTG---MLKRVSLWLCEKGFHVSVIARREVKLENVKREST   44 (177)
T ss_pred             EEEEECcCH---HHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhh
Confidence            589999986   445699999999999988  88888888877654

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=89.85  E-value=1  Score=41.01  Aligned_cols=65  Identities=23%  Similarity=0.321  Sum_probs=42.2

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccc---cccc-eeeeccccc-CceeEEEE
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVE---AQHN-LVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~---~~~~-l~~~t~~~~-~~~~vwiv  366 (474)
                      +|.++||+|  .||+++|..|+..+.  ++.|  +++++.+....++..-   ...+ .+....|++ ++++|+|+
T Consensus         2 KV~IiGa~G--~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvi   75 (141)
T PF00056_consen    2 KVAIIGAAG--NVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVI   75 (141)
T ss_dssp             EEEEESTTS--HHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEE
T ss_pred             EEEEECCCC--hHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEE
Confidence            789999998  999999999995554  3555  6666666555543331   1111 122334555 89988775

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.82  E-value=0.6  Score=47.74  Aligned_cols=90  Identities=19%  Similarity=0.240  Sum_probs=62.0

Q ss_pred             HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973          286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-  358 (474)
Q Consensus       286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-  358 (474)
                      |++.|++=+     +-.-++|+++|...  -||+-+|..|-++|..|++ .++-              .      ++++ 
T Consensus       141 Tp~av~~lL~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~AtVt~chs~T--------------~------~l~~~  198 (278)
T PRK14172        141 TPNSVITLIKSLNIDIEGKEVVVIGRSN--IVGKPVAQLLLNENATVTICHSKT--------------K------NLKEV  198 (278)
T ss_pred             CHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCCC--------------C------CHHHH
Confidence            555555533     44678999999998  9999999999999999998 2111              0      1111 


Q ss_pred             -CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc--CCCCCeee
Q 011973          359 -HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCFY  401 (474)
Q Consensus       359 -~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~--~~R~dc~y  401 (474)
                       +.++|+|  +|  +.++++..   ++|+++||+- +++.  ++--|+-+
T Consensus       199 ~~~ADIvIsAvGkp~~i~~~~i---k~gavVIDvG-in~~~gkl~GDvd~  244 (278)
T PRK14172        199 CKKADILVVAIGRPKFIDEEYV---KEGAIVIDVG-TSSVNGKITGDVNF  244 (278)
T ss_pred             HhhCCEEEEcCCCcCccCHHHc---CCCcEEEEee-ccccCCceeeeccH
Confidence             3566666  33  35777766   9999999996 5553  45556543

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=89.79  E-value=0.56  Score=46.95  Aligned_cols=85  Identities=14%  Similarity=0.197  Sum_probs=56.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE--EcC----
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD----  368 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--vg~----  368 (474)
                      .+|.++|. |  .+|+++|+.|.+.|.+|..  |++++.+.+++.   +    ....+++++  ++++++|  +-+    
T Consensus         3 ~~IgviG~-G--~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~---g----~~~~~~~~e~~~~~d~vi~~vp~~~~~   72 (296)
T PRK11559          3 MKVGFIGL-G--IMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA---G----AETASTAKAVAEQCDVIITMLPNSPHV   72 (296)
T ss_pred             ceEEEEcc-C--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC---C----CeecCCHHHHHhcCCEEEEeCCCHHHH
Confidence            36899996 5  9999999999999999988  788887777653   0    011223332  5565544  211    


Q ss_pred             --cCChhh--hhcCCCCceeecccccCcc
Q 011973          369 --DLTGKE--QARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       369 --~i~~~e--q~~a~~G~~f~~~~~v~p~  393 (474)
                        .+..++  ...+++|+++++.|.++|.
T Consensus        73 ~~v~~~~~~~~~~~~~g~iiid~st~~~~  101 (296)
T PRK11559         73 KEVALGENGIIEGAKPGTVVIDMSSIAPL  101 (296)
T ss_pred             HHHHcCcchHhhcCCCCcEEEECCCCCHH
Confidence              111111  2345899999999998885

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=89.75  E-value=1.1  Score=39.08  Aligned_cols=86  Identities=13%  Similarity=0.144  Sum_probs=48.2

Q ss_pred             EEEEeccCCCchhHHHHHHHHhc-cCcEEEe---cchhhHHHHHhhCcccccccee-eec--ccccCceeEEE--EcCcC
Q 011973          300 HVLLRGTVTANKVANAVASSLCQ-MGIKVAT---ICKDDYEKLKLRIPVEAQHNLV-LST--SYAAHKTKIWL--VGDDL  370 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~-~~v~v~l---~~~~~~~~l~~~~~~~~~~~l~-~~t--~~~~~~~~vwi--vg~~i  370 (474)
                      +|.++|++|  .+|+.++..|.+ +++++..   +++++-+.++..-+.-. ..+. ..+  .++..++++++  +++..
T Consensus         1 ki~iiG~~g--~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~DvV~~~~~~~~   77 (122)
T smart00859        1 KVAIVGATG--YVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLK-GEVVLELEPEDFEELAVDIVFLALPHGV   77 (122)
T ss_pred             CEEEECCCC--hHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccc-cccccccccCChhhcCCCEEEEcCCcHH
Confidence            478999999  999999999996 6877665   33322223332211111 0101 111  11113566654  44444


Q ss_pred             Chh----hhhcCCCCceeeccc
Q 011973          371 TGK----EQARAPKGTIFIPYT  388 (474)
Q Consensus       371 ~~~----eq~~a~~G~~f~~~~  388 (474)
                      ..+    -+..+.+|.+++|.+
T Consensus        78 ~~~~~~~~~~~~~~g~~viD~s   99 (122)
T smart00859       78 SKEIAPLLPKAAEAGVKVIDLS   99 (122)
T ss_pred             HHHHHHHHHhhhcCCCEEEECC
Confidence            444    233468999999988

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK01713 ornithine carbamoyltransferase; Provisional

Probab=89.72  E-value=2  Score=44.84  Aligned_cols=164  Identities=15%  Similarity=0.195  Sum_probs=98.4

Q ss_pred             HHHcCCcEEEeccc----ccccc-------ccccCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 011973          241 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  291 (474)
Q Consensus       241 A~k~G~kV~~LG~l----n~~e~-------ln~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvvl  291 (474)
                      +.++|.+++.|+.=    .++|.       |....-+.+.|+|+         ...++|+.+.+         +=..++.
T Consensus        68 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~  147 (334)
T PRK01713         68 AYDQGAQVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQSIVNELAEYAGVPVFNGLTDEFHPTQMLADVLTMI  147 (334)
T ss_pred             HHHcCCeEEEcCCccccCCCCcCHHHHHHHHHHhCCEEEEEcCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence            36899999999743    34555       35556677888886         35789998865         1246666


Q ss_pred             hcCc--CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHH------HHHhhCccccccceeeecccc-c-Cce
Q 011973          292 NSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE------KLKLRIPVEAQHNLVLSTSYA-A-HKT  361 (474)
Q Consensus       292 ~~ip--~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~------~l~~~~~~~~~~~l~~~t~~~-~-~~~  361 (474)
                      +...  -+..+|+++|... +.+++..+..|++-|..+.+-.++.|+      ...+++..+.+..+...++.+ + +++
T Consensus       148 e~~g~~l~gl~ia~vGD~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~a  226 (334)
T PRK01713        148 ENCDKPLSEISYVYIGDAR-NNMGNSLLLIGAKLGMDVRICAPKALLPEASLVEMCEKFAKESGARITVTDDIDKAVKGV  226 (334)
T ss_pred             HHcCCCcCCcEEEEECCCc-cCHHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCC
Confidence            6543  2456999999963 359999999999999999993333332      112222233333322223444 4 788


Q ss_pred             eEEEEcCcCChhhhhc--CCCCceeecccccCcc--C-C-CCCeee-ecCCc
Q 011973          362 KIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR--K-L-RKDCFY-HSTPA  406 (474)
Q Consensus       362 ~vwivg~~i~~~eq~~--a~~G~~f~~~~~v~p~--~-~-R~dc~y-~~~~a  406 (474)
                      +|+..+-|.+-.++..  ...-..|-+|. ++.+  + . |+||.+ |.+|+
T Consensus       227 DvVyt~~w~sm~~~~~~~~~~~~~~~~y~-v~~ell~~a~k~~aivmH~lP~  277 (334)
T PRK01713        227 DFVHTDVWVSMGEPLETWGERIKLLMPYQ-VTPELMKRTGNPKVKFMHCLPA  277 (334)
T ss_pred             CEEEEcceeecccchhhHHHHHHhccCCc-CCHHHHhccCCCCCEEECCCCC
Confidence            8877655544211100  00001344554 8887  3 3 578874 77776

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=89.63  E-value=0.4  Score=49.78  Aligned_cols=31  Identities=16%  Similarity=0.195  Sum_probs=29.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ..++|+|+|+||  -||+++|+.|.++|.+|+.
T Consensus        20 ~~~~IlVtGgtG--fIG~~l~~~L~~~G~~V~~   50 (370)
T PLN02695         20 EKLRICITGAGG--FIASHIARRLKAEGHYIIA   50 (370)
T ss_pred             CCCEEEEECCcc--HHHHHHHHHHHhCCCEEEE
Confidence            567899999999  9999999999999999987

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=89.63  E-value=0.52  Score=45.68  Aligned_cols=32  Identities=13%  Similarity=0.282  Sum_probs=27.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.|+|+|+++++-||+++|+.|+++|.+|.+
T Consensus         6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~   37 (256)
T PRK12859          6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFF   37 (256)
T ss_pred             CcEEEEECCCCCCChHHHHHHHHHHCCCeEEE
Confidence            46899999984237999999999999999987

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=89.48  E-value=0.46  Score=43.05  Aligned_cols=67  Identities=16%  Similarity=0.223  Sum_probs=42.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE---cC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV---GD  368 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv---g~  368 (474)
                      .+-+|-++|+ |  ++|.+++++|.+.|..|.-   |+.+.-++++.+++...      ..++++  ++++++++   |+
T Consensus         9 ~~l~I~iIGa-G--rVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~------~~~~~~~~~~aDlv~iavpDd   79 (127)
T PF10727_consen    9 ARLKIGIIGA-G--RVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGA------ILDLEEILRDADLVFIAVPDD   79 (127)
T ss_dssp             ---EEEEECT-S--CCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----------TTGGGCC-SEEEE-S-CC
T ss_pred             CccEEEEECC-C--HHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccc------ccccccccccCCEEEEEechH
Confidence            3458999999 4  9999999999999998876   77777888887776654      113322  67778664   55


Q ss_pred             cCCh
Q 011973          369 DLTG  372 (474)
Q Consensus       369 ~i~~  372 (474)
                      -|.+
T Consensus        80 aI~~   83 (127)
T PF10727_consen   80 AIAE   83 (127)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5544

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=89.31  E-value=0.57  Score=49.59  Aligned_cols=140  Identities=14%  Similarity=0.183  Sum_probs=88.1

Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEe--ccccc-------cccccccC---ceeeec-CCCCcce----------------
Q 011973          227 REAINSLIEEAILEADAKGVKVISL--GLLNQ-------GEELNRNG---EIYLER-QPNKLKI----------------  277 (474)
Q Consensus       227 ~~~in~~Ie~Ai~~A~k~G~kV~~L--G~ln~-------~e~ln~~g---~l~v~k-~p~~L~i----------------  277 (474)
                      ..+-+.-+...++.|++.|++..-.  -.-.+       -++||.|-   ++.++. -|++++.                
T Consensus       114 dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVDGl  193 (364)
T PLN02616        114 RKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGF  193 (364)
T ss_pred             ChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccC
Confidence            3345555667788899999986543  32221       25567764   333331 1333431                


Q ss_pred             ------eeecC--C----hhHHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHH
Q 011973          278 ------KVVDG--S----SLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLK  339 (474)
Q Consensus       278 ------rvv~G--n----sltaAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~  339 (474)
                            |+..|  +    .-|++.|++-+.     -.-++|+|+|...  -||+-+|..|.++|-.|++ .++-      
T Consensus       194 ~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~--iVGkPLa~LL~~~~ATVTicHs~T------  265 (364)
T PLN02616        194 HPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSRT------  265 (364)
T ss_pred             ChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCeEEEeCCCC------
Confidence                  23333  1    346666666543     3678999999998  9999999999999999999 2111      


Q ss_pred             hhCccccccceeeeccccc--CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973          340 LRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       340 ~~~~~~~~~~l~~~t~~~~--~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                                    .++++  +.+||+|  +|  ..++++..   ++|+++||+- +.+
T Consensus       266 --------------~nl~~~~r~ADIVIsAvGkp~~i~~d~v---K~GAvVIDVG-In~  306 (364)
T PLN02616        266 --------------KNPEEITREADIIISAVGQPNMVRGSWI---KPGAVVIDVG-INP  306 (364)
T ss_pred             --------------CCHHHHHhhCCEEEEcCCCcCcCCHHHc---CCCCEEEecc-ccc
Confidence                          01121  4566666  33  34677666   9999999998 655

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=89.12  E-value=0.48  Score=44.45  Aligned_cols=40  Identities=23%  Similarity=0.327  Sum_probs=31.6

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI  342 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~-~~~~~l~~~~  342 (474)
                      |+++|++|  -||+.+|+.|+++|.+|.+  |+. ++.+.+.+++
T Consensus         1 vlItG~~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~   43 (239)
T TIGR01830         1 ALVTGASR--GIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEEL   43 (239)
T ss_pred             CEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence            57899998  9999999999999999888  443 4555555543

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.04  E-value=0.67  Score=47.51  Aligned_cols=81  Identities=17%  Similarity=0.233  Sum_probs=57.7

Q ss_pred             HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973          286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-  358 (474)
Q Consensus       286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-  358 (474)
                      |++.|++=+     +-.-++|+++|.+.  -||+-+|..|.++|-.|++ .++-+                    ++++ 
T Consensus       142 Tp~avi~ll~~y~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVt~chs~T~--------------------~l~~~  199 (284)
T PRK14177        142 TPYGMVLLLKEYGIDVTGKNAVVVGRSP--ILGKPMAMLLTEMNATVTLCHSKTQ--------------------NLPSI  199 (284)
T ss_pred             CHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCCC--------------------CHHHH
Confidence            666666544     34678999999998  9999999999999999999 21110                    1111 


Q ss_pred             -CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973          359 -HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       359 -~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                       +.+||+|  +|  ..++++..   ++|++++|+. +..
T Consensus       200 ~~~ADIvIsAvGk~~~i~~~~i---k~gavVIDvG-in~  234 (284)
T PRK14177        200 VRQADIIVGAVGKPEFIKADWI---SEGAVLLDAG-YNP  234 (284)
T ss_pred             HhhCCEEEEeCCCcCccCHHHc---CCCCEEEEec-Ccc
Confidence             3556655  34  34677666   9999999998 554

>PRK08655 prephenate dehydrogenase; Provisional

Probab=88.97  E-value=1.1  Score=48.25  Aligned_cols=83  Identities=16%  Similarity=0.221  Sum_probs=54.0

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEcCcCCh---
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGDDLTG---  372 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg~~i~~---  372 (474)
                      +|.++|++|  .+|+++|+.|.+.|.+|.+  |++++.+++..+.+-.      ..++.+ . ++++++|+--..+.   
T Consensus         2 kI~IIGG~G--~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~------~~~~~~e~~~~aDvVIlavp~~~~~~   73 (437)
T PRK08655          2 KISIIGGTG--GLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVE------YANDNIDAAKDADIVIISVPINVTED   73 (437)
T ss_pred             EEEEEecCC--HHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCe------eccCHHHHhccCCEEEEecCHHHHHH
Confidence            589999999  9999999999999999888  7777766665554321      112332 2 56666553211111   


Q ss_pred             --hh-hhcCCCCceeeccccc
Q 011973          373 --KE-QARAPKGTIFIPYTQI  390 (474)
Q Consensus       373 --~e-q~~a~~G~~f~~~~~v  390 (474)
                        ++ ...+++|+++++++-+
T Consensus        74 vl~~l~~~l~~~~iViDvsSv   94 (437)
T PRK08655         74 VIKEVAPHVKEGSLLMDVTSV   94 (437)
T ss_pred             HHHHHHhhCCCCCEEEEcccc
Confidence              12 1235789999999853

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=88.95  E-value=0.71  Score=47.69  Aligned_cols=82  Identities=15%  Similarity=0.159  Sum_probs=57.5

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973          285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  358 (474)
Q Consensus       285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~  358 (474)
                      -|++.|++=+     +-.-++|+++|.+.  -||+-+|..|.++|-.|++ .++-                    .+.++
T Consensus       149 cTp~avi~lL~~~~i~l~Gk~vvVIGRS~--iVGkPla~lL~~~~ATVtvchs~T--------------------~nl~~  206 (299)
T PLN02516        149 CTPKGCLELLSRSGIPIKGKKAVVVGRSN--IVGLPVSLLLLKADATVTVVHSRT--------------------PDPES  206 (299)
T ss_pred             CCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCCC--------------------CCHHH
Confidence            3666666544     44678999999997  9999999999999999999 2211                    01121


Q ss_pred             --CceeEEE--EcC--cCChhhhhcCCCCceeecccccCc
Q 011973          359 --HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       359 --~~~~vwi--vg~--~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                        +++||+|  +|+  .++++..   ++|++++|+. +..
T Consensus       207 ~~~~ADIvv~AvGk~~~i~~~~v---k~gavVIDvG-in~  242 (299)
T PLN02516        207 IVREADIVIAAAGQAMMIKGDWI---KPGAAVIDVG-TNA  242 (299)
T ss_pred             HHhhCCEEEEcCCCcCccCHHHc---CCCCEEEEee-ccc
Confidence              4566666  343  4555555   9999999998 554

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=88.91  E-value=0.73  Score=44.48  Aligned_cols=40  Identities=15%  Similarity=0.179  Sum_probs=35.8

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      +|.++|++|  .+|+++|+.|++.|.+|.+  |++++.+.++++
T Consensus         2 kI~IIGG~G--~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTG--DQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCC--HHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            588999888  9999999999999999888  888888888765

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=88.90  E-value=0.68  Score=47.78  Aligned_cols=82  Identities=17%  Similarity=0.223  Sum_probs=57.6

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhcc----CcEEEe-cchhhHHHHHhhCccccccceeeec
Q 011973          285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEKLKLRIPVEAQHNLVLST  354 (474)
Q Consensus       285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~----~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t  354 (474)
                      -|++.|++=+     +-.-++|+|+|.+.  -||+-+|..|.++    +-.|++ .++-                    .
T Consensus       143 cTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~atVtv~hs~T--------------------~  200 (297)
T PRK14168        143 CTPAGIQEMLVRSGVETSGAEVVVVGRSN--IVGKPIANMMTQKGPGANATVTIVHTRS--------------------K  200 (297)
T ss_pred             CCHHHHHHHHHHhCCCCCCCEEEEECCCC--cccHHHHHHHHhcccCCCCEEEEecCCC--------------------c
Confidence            3566665544     44678999999998  9999999999987    788888 2111                    0


Q ss_pred             cccc--CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973          355 SYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       355 ~~~~--~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                      ++++  +.+||+|  +|  ..++++..   ++|+++||+. ++.
T Consensus       201 ~l~~~~~~ADIvVsAvGkp~~i~~~~i---k~gavVIDvG-in~  240 (297)
T PRK14168        201 NLARHCQRADILIVAAGVPNLVKPEWI---KPGATVIDVG-VNR  240 (297)
T ss_pred             CHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEecC-CCc
Confidence            1121  4566666  34  35777766   9999999998 554

>PRK02102 ornithine carbamoyltransferase; Validated

Probab=88.88  E-value=5.8  Score=41.52  Aligned_cols=163  Identities=18%  Similarity=0.161  Sum_probs=95.9

Q ss_pred             HHHcCCcEEEecccc----ccccc-------cccCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 011973          241 ADAKGVKVISLGLLN----QGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  291 (474)
Q Consensus       241 A~k~G~kV~~LG~ln----~~e~l-------n~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvvl  291 (474)
                      +.++|.+++-|+.=+    ++|.+       ....-+.+.|+|+         ..+++|+.+-+         +=+.++.
T Consensus        68 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~rvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~  147 (331)
T PRK02102         68 AIDLGAHVTYLGPNDSQLGKKESIEDTARVLGRMYDGIEYRGFKQEIVEELAKYSGVPVWNGLTDEWHPTQMLADFMTMK  147 (331)
T ss_pred             HHHcCCCEEEcCcccccCCCCcCHHHHHHHHhhcCCEEEEECCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence            458999999987543    36655       5666677888887         24577777543         1234555


Q ss_pred             hcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHH---HH---hhCccccccceeeec-ccc-c-Cce
Q 011973          292 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEK---LK---LRIPVEAQHNLVLST-SYA-A-HKT  361 (474)
Q Consensus       292 ~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~---l~---~~~~~~~~~~l~~~t-~~~-~-~~~  361 (474)
                      +.... +..+|+++|... +.+.+..+..|++-|.+|.+-.++.|+.   +.   +++.+..+.. +..+ +.+ + +++
T Consensus       148 e~~g~l~g~~va~vGd~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~-~~~~~d~~ea~~~a  225 (331)
T PRK02102        148 EHFGPLKGLKLAYVGDGR-NNMANSLMVGGAKLGMDVRICAPKELWPEEELVALAREIAKETGAK-ITITEDPEEAVKGA  225 (331)
T ss_pred             HHhCCCCCCEEEEECCCc-ccHHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHHHHHHHcCCe-EEEEcCHHHHhCCC
Confidence            54432 457999999973 3689999999999999998833333321   11   1122223333 3234 444 4 888


Q ss_pred             eEEEEcCcCChhhhh-cCCCCceeecccccCcc--C--CCCCee-eecCCc
Q 011973          362 KIWLVGDDLTGKEQA-RAPKGTIFIPYTQIPPR--K--LRKDCF-YHSTPA  406 (474)
Q Consensus       362 ~vwivg~~i~~~eq~-~a~~G~~f~~~~~v~p~--~--~R~dc~-y~~~~a  406 (474)
                      +|+..+-|.+-.+.. +...-..|-+| |++.+  +  .++||. .|.+|+
T Consensus       226 Dvvyt~~w~~~~~~~~~~~~~~~~~~y-~vt~ell~~~~~~d~ivmH~lP~  275 (331)
T PRK02102        226 DVIYTDVWVSMGEEDEWEERIKLLKPY-QVNMDLMKATGNPDVIFMHCLPA  275 (331)
T ss_pred             CEEEEcCcccCccccchHHHHHhccCC-cCCHHHHhhhcCCCCEEECCCCC
Confidence            887776554311100 00111233455 38887  4  368887 478886

>PRK08324 short chain dehydrogenase; Validated

Probab=88.83  E-value=0.58  Score=52.76  Aligned_cols=45  Identities=18%  Similarity=0.177  Sum_probs=39.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.|+|+|++|  -||+++|+.|.++|.+|.+  |+.++++++.+++..
T Consensus       422 gk~vLVTGasg--gIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~  468 (681)
T PRK08324        422 GKVALVTGAAG--GIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG  468 (681)
T ss_pred             CCEEEEecCCC--HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc
Confidence            47899999998  9999999999999999988  888888888777554

>PLN00015 protochlorophyllide reductase

Probab=88.80  E-value=0.49  Score=47.51  Aligned_cols=40  Identities=18%  Similarity=0.140  Sum_probs=35.2

Q ss_pred             EEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCc
Q 011973          302 LLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       302 ~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +++|+++  -||+++|+.|+++| .+|.+  |+.++.+++.+++.
T Consensus         1 lITGas~--GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~   43 (308)
T PLN00015          1 IITGASS--GLGLATAKALAETGKWHVVMACRDFLKAERAAKSAG   43 (308)
T ss_pred             CEeCCCC--hHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhc
Confidence            4789997  99999999999999 89888  88888888887764

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=88.78  E-value=0.54  Score=47.86  Aligned_cols=37  Identities=16%  Similarity=0.142  Sum_probs=31.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHH
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  337 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~  337 (474)
                      ++|+++|++|  =||+++|+.|.++|.+|+.  |+++....
T Consensus         5 k~ilItGatG--~IG~~l~~~L~~~G~~V~~~~r~~~~~~~   43 (349)
T TIGR02622         5 KKVLVTGHTG--FKGSWLSLWLLELGAEVYGYSLDPPTSPN   43 (349)
T ss_pred             CEEEEECCCC--hhHHHHHHHHHHCCCEEEEEeCCCccchh
Confidence            6799999999  9999999999999999987  55544333

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=88.56  E-value=0.87  Score=46.67  Aligned_cols=105  Identities=21%  Similarity=0.230  Sum_probs=66.8

Q ss_pred             HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeecccccC
Q 011973          286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH  359 (474)
Q Consensus       286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~  359 (474)
                      |++.|++=+     +-.-++|+++|...  -||+-+|..|.++|-.|++ .++-  ++|++.         +       +
T Consensus       140 Tp~avi~lL~~~~i~l~Gk~vvViGrS~--~VG~Pla~lL~~~~AtVti~hs~T--~~l~~~---------~-------~  199 (281)
T PRK14183        140 TPLGVMELLEEYEIDVKGKDVCVVGASN--IVGKPMAALLLNANATVDICHIFT--KDLKAH---------T-------K  199 (281)
T ss_pred             cHHHHHHHHHHcCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--cCHHHH---------H-------h
Confidence            666666544     44688999999997  9999999999999999998 2111  011100         0       3


Q ss_pred             ceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCeeeec-----CCccccCCCCc
Q 011973          360 KTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAMIIPPSLS  414 (474)
Q Consensus       360 ~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~y~~-----~~am~vP~~~~  414 (474)
                      .++|+|  +|  +.++++..   ++|+++||+. +.+.   ++--|+-+.+     ...+.||+.+.
T Consensus       200 ~ADIvV~AvGkp~~i~~~~v---k~gavvIDvG-in~~~~gkl~GDVd~~~~~~~a~~iTPVPGGVG  262 (281)
T PRK14183        200 KADIVIVGVGKPNLITEDMV---KEGAIVIDIG-INRTEDGRLVGDVDFENVAKKCSYITPVPGGVG  262 (281)
T ss_pred             hCCEEEEecCcccccCHHHc---CCCcEEEEee-ccccCCCCeECCccHHHHHhhceEecCCCCCCh
Confidence            455555  34  34666665   9999999998 6652   4445554322     11244666554

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=88.53  E-value=0.85  Score=43.02  Aligned_cols=29  Identities=24%  Similarity=0.366  Sum_probs=27.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +.|+++|++|  -||+++|+.|+++|.+|.+
T Consensus         3 k~vlItG~s~--~iG~~la~~l~~~g~~vi~   31 (245)
T PRK12824          3 KIALVTGAKR--GIGSAIARELLNDGYRVIA   31 (245)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHcCCEEEE
Confidence            5789999998  9999999999999999988

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=88.50  E-value=0.85  Score=48.25  Aligned_cols=45  Identities=18%  Similarity=0.303  Sum_probs=37.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c--chhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I--CKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~--~~~~~~~l~~~~~  343 (474)
                      ..+.|+++|++|  -||+++|++|+++|.+|++  +  +.++++++.+++.
T Consensus       209 ~g~~vlItGasg--gIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~  257 (450)
T PRK08261        209 AGKVALVTGAAR--GIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG  257 (450)
T ss_pred             CCCEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC
Confidence            457899999998  9999999999999999998  3  3566777766654

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=88.44  E-value=0.6  Score=44.73  Aligned_cols=39  Identities=21%  Similarity=0.307  Sum_probs=30.1

Q ss_pred             ccCCCchhHHHHHHHHhccCcEEEe--cchhh----HHHHHhhCc
Q 011973          305 GTVTANKVANAVASSLCQMGIKVAT--ICKDD----YEKLKLRIP  343 (474)
Q Consensus       305 Gatg~~kig~ava~~L~~~~v~v~l--~~~~~----~~~l~~~~~  343 (474)
                      |++..+-||++||+.|+++|.+|++  |++++    ++++.++.+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~   45 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG   45 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC
Confidence            4552238999999999999999999  77777    556665555

...

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=88.40  E-value=0.73  Score=48.47  Aligned_cols=82  Identities=17%  Similarity=0.159  Sum_probs=58.2

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973          285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  358 (474)
Q Consensus       285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~  358 (474)
                      -|++.|++=+     +-.-++|+|+|...  -||+-+|..|.++|-.|++ .++-                    .+.++
T Consensus       196 CTp~avi~LL~~~~i~l~GK~vvVIGRS~--iVGkPla~LL~~~~ATVTicHs~T--------------------~nl~~  253 (345)
T PLN02897        196 CTPKGCVELLIRSGVEIAGKNAVVIGRSN--IVGLPMSLLLQRHDATVSTVHAFT--------------------KDPEQ  253 (345)
T ss_pred             CCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCEEEEEcCCC--------------------CCHHH
Confidence            3666666544     44688999999997  9999999999999999998 2111                    01111


Q ss_pred             --CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973          359 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       359 --~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                        +.+||+|  +|  ..++++..   ++|+++||+. +.+
T Consensus       254 ~~~~ADIvIsAvGkp~~v~~d~v---k~GavVIDVG-in~  289 (345)
T PLN02897        254 ITRKADIVIAAAGIPNLVRGSWL---KPGAVVIDVG-TTP  289 (345)
T ss_pred             HHhhCCEEEEccCCcCccCHHHc---CCCCEEEEcc-ccc
Confidence              4666766  33  34677666   9999999998 655

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=88.39  E-value=0.91  Score=49.43  Aligned_cols=61  Identities=26%  Similarity=0.382  Sum_probs=45.9

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      |||.....+.--...+...+.|+++|+ |  .+|++++..|.+.|.++.+  |+.++.+++.++..
T Consensus       314 TD~~G~~~~l~~~~~~~~~k~vlIiGa-G--giG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~  376 (477)
T PRK09310        314 TDGEGLFSLLKQKNIPLNNQHVAIVGA-G--GAAKAIATTLARAGAELLIFNRTKAHAEALASRCQ  376 (477)
T ss_pred             cCHHHHHHHHHhcCCCcCCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence            566655555432334445678999996 5  8999999999999999888  88888888877643

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=88.38  E-value=0.39  Score=49.45  Aligned_cols=66  Identities=17%  Similarity=0.290  Sum_probs=42.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcE--EEe--cchhhHHHHHhhCcccc---ccceeee-ccccc-CceeEEEE
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIK--VAT--ICKDDYEKLKLRIPVEA---QHNLVLS-TSYAA-HKTKIWLV  366 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~--v~l--~~~~~~~~l~~~~~~~~---~~~l~~~-t~~~~-~~~~vwiv  366 (474)
                      +.+|.++|| |  .||+++|..|+.++..  +.|  .++++.+-...++..-.   ...-+.. ++|+. ++++|+|+
T Consensus         3 ~~Ki~IiGa-G--~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~~~~adivvi   77 (312)
T cd05293           3 RNKVTVVGV-G--QVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIV   77 (312)
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHHhCCCCEEEE
Confidence            468999997 8  9999999999966663  444  55665554443322211   1122444 46665 88888765

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=88.38  E-value=1.2  Score=45.69  Aligned_cols=81  Identities=15%  Similarity=0.220  Sum_probs=57.3

Q ss_pred             HHHHHHhc-----CcCCCcEEEEeccCCCchhHHHHHHHHhcc----CcEEEe-cchhhHHHHHhhCccccccceeeecc
Q 011973          286 AAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTS  355 (474)
Q Consensus       286 taAvvl~~-----ip~~~~~V~l~Gatg~~kig~ava~~L~~~----~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~  355 (474)
                      |+..|++=     |+-.-++|+++|...  -||+-+|..|.++    +-.|++ .++-                    ++
T Consensus       136 Tp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~AtVtvchs~T--------------------~~  193 (287)
T PRK14181        136 TPAGIIELLKYYEIPLHGRHVAIVGRSN--IVGKPLAALLMQKHPDTNATVTLLHSQS--------------------EN  193 (287)
T ss_pred             CHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHhCcCCCCCEEEEeCCCC--------------------CC
Confidence            66666654     445688999999998  9999999999988    788888 1111                    01


Q ss_pred             ccc--CceeEEE--EcC--cCChhhhhcCCCCceeecccccCc
Q 011973          356 YAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       356 ~~~--~~~~vwi--vg~--~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                      +++  +.+||+|  +|+  .++++..   ++|+++||+. +.+
T Consensus       194 l~~~~~~ADIvV~AvG~p~~i~~~~i---k~GavVIDvG-in~  232 (287)
T PRK14181        194 LTEILKTADIIIAAIGVPLFIKEEMI---AEKAVIVDVG-TSR  232 (287)
T ss_pred             HHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence            222  4566666  443  4676666   9999999998 554

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=88.35  E-value=1.2  Score=44.71  Aligned_cols=85  Identities=9%  Similarity=0.091  Sum_probs=53.3

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-cccc-CceeEEEEcCcCCh---
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA-HKTKIWLVGDDLTG---  372 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t-~~~~-~~~~vwivg~~i~~---  372 (474)
                      +|.++| .|  .+|.++|+.|.+.|.+|..  ++++..++++++-.      +...+ +.++ ++++++|+--..+.   
T Consensus         2 ~I~IIG-~G--~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~------~~~~~~~~~~~~~aDlVilavp~~~~~~   72 (279)
T PRK07417          2 KIGIVG-LG--LIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGL------VDEASTDLSLLKDCDLVILALPIGLLLP   72 (279)
T ss_pred             eEEEEe-ec--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC------cccccCCHhHhcCCCEEEEcCCHHHHHH
Confidence            588999 46  9999999999999999988  77788777765410      01111 2233 56767553111000   


Q ss_pred             --hhh-hcCCCCceeecccccCcc
Q 011973          373 --KEQ-ARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       373 --~eq-~~a~~G~~f~~~~~v~p~  393 (474)
                        ++. ..+++++++++++-+++.
T Consensus        73 ~~~~l~~~l~~~~ii~d~~Svk~~   96 (279)
T PRK07417         73 PSEQLIPALPPEAIVTDVGSVKAP   96 (279)
T ss_pred             HHHHHHHhCCCCcEEEeCcchHHH
Confidence              122 234678888888766654

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=88.23  E-value=0.52  Score=48.36  Aligned_cols=64  Identities=16%  Similarity=0.179  Sum_probs=42.3

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c--CceeEEE--EcCcCChh
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A--HKTKIWL--VGDDLTGK  373 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~--~~~~vwi--vg~~i~~~  373 (474)
                      |+++|+||  -||++++..|++.|-+|++  |+..+-+.....   ..+    ..+.+. .  ..+|+||  +|+.|-.+
T Consensus         1 IliTGgTG--lIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~---~v~----~~~~~~~~~~~~~DavINLAG~~I~~r   71 (297)
T COG1090           1 ILITGGTG--LIGRALTARLRKGGHQVTILTRRPPKASQNLHP---NVT----LWEGLADALTLGIDAVINLAGEPIAER   71 (297)
T ss_pred             CeEecccc--chhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc---ccc----ccchhhhcccCCCCEEEECCCCccccc
Confidence            57999999  9999999999999999999  665533322111   000    011121 1  3578877  88887766

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=88.18  E-value=0.79  Score=45.99  Aligned_cols=40  Identities=25%  Similarity=0.307  Sum_probs=34.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      .+|.|+|+.   .+|+++|..|++.|.+|++  ++++.+++.++.
T Consensus         4 ~kIaViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~   45 (287)
T PRK08293          4 KNVTVAGAG---VLGSQIAFQTAFHGFDVTIYDISDEALEKAKER   45 (287)
T ss_pred             cEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence            579999985   8999999999999999999  788877776654

>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=88.17  E-value=0.91  Score=46.77  Aligned_cols=83  Identities=17%  Similarity=0.217  Sum_probs=57.4

Q ss_pred             hHHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhc----cCcEEEe-c-chhhHHHHHhhCccccccceeee
Q 011973          285 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVAT-I-CKDDYEKLKLRIPVEAQHNLVLS  353 (474)
Q Consensus       285 ltaAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~----~~v~v~l-~-~~~~~~~l~~~~~~~~~~~l~~~  353 (474)
                      -|++.|++-+.     -.-++|+++|...  -||+-+|..|.+    ++..|++ . +...+++   .         +  
T Consensus       141 cTp~ail~ll~~y~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~---~---------~--  204 (295)
T PRK14174        141 CTPYGILELLGRYNIETKGKHCVVVGRSN--IVGKPMANLMLQKLKESNCTVTICHSATKDIPS---Y---------T--  204 (295)
T ss_pred             CCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHhccccCCCEEEEEeCCchhHHH---H---------H--
Confidence            46777766554     3578999999998  999999999986    7888888 1 1111111   0         0  


Q ss_pred             cccccCceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973          354 TSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       354 t~~~~~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                           +.+||+|  +|  +.++++..   ++|++++|++ ++.
T Consensus       205 -----~~ADIvI~Avg~~~li~~~~v---k~GavVIDVg-i~~  238 (295)
T PRK14174        205 -----RQADILIAAIGKARFITADMV---KPGAVVIDVG-INR  238 (295)
T ss_pred             -----HhCCEEEEecCccCccCHHHc---CCCCEEEEee-ccc
Confidence                 3556655  23  35676666   9999999998 654

>PRK13243 glyoxylate reductase; Reviewed

Probab=88.16  E-value=0.94  Score=46.96  Aligned_cols=97  Identities=8%  Similarity=0.083  Sum_probs=64.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------  366 (474)
                      ..++|.++|- |  .||+.+|+.|...|.+|..  |+.+..  ...+..       +...++++  +.++++++      
T Consensus       149 ~gktvgIiG~-G--~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~~-------~~~~~l~ell~~aDiV~l~lP~t~  216 (333)
T PRK13243        149 YGKTIGIIGF-G--RIGQAVARRAKGFGMRILYYSRTRKPE--AEKELG-------AEYRPLEELLRESDFVSLHVPLTK  216 (333)
T ss_pred             CCCEEEEECc-C--HHHHHHHHHHHHCCCEEEEECCCCChh--hHHHcC-------CEecCHHHHHhhCCEEEEeCCCCh
Confidence            5778999998 5  9999999999999999988  333221  111111       11124433  56666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCeeeecCC
Q 011973          367 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHSTP  405 (474)
Q Consensus       367 --g~~i~~~eq~~a~~G~~f~~~~~---v~p~---------~~R---~dc~y~~~~  405 (474)
                        -..+..+....+++|++++.++|   ++.+         +++   -|++..+-+
T Consensus       217 ~T~~~i~~~~~~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gAaLDV~~~EP~  272 (333)
T PRK13243        217 ETYHMINEERLKLMKPTAILVNTARGKVVDTKALVKALKEGWIAGAGLDVFEEEPY  272 (333)
T ss_pred             HHhhccCHHHHhcCCCCeEEEECcCchhcCHHHHHHHHHcCCeEEEEeccCCCCCC
Confidence              23456688899999999999999   4443         222   488877643

>PRK12562 ornithine carbamoyltransferase subunit F; Provisional

Probab=88.01  E-value=2.7  Score=44.07  Aligned_cols=165  Identities=17%  Similarity=0.217  Sum_probs=101.0

Q ss_pred             HHHcCCcEEEeccc----ccccc-------ccccCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 011973          241 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  291 (474)
Q Consensus       241 A~k~G~kV~~LG~l----n~~e~-------ln~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvvl  291 (474)
                      +.++|.+++.|+.=    .++|.       |.+..-+.+.|+|+         ..+|+|+.+-+         +=+.++.
T Consensus        67 ~~~LGg~~i~l~~~~s~~~kgEsl~Dtarvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~  146 (334)
T PRK12562         67 AYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGHGQEVVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQ  146 (334)
T ss_pred             HHHcCCeEEEeCCccccCCCCcCHHHHHHHHHHhCCEEEEECCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence            46799999999643    33554       35566677888876         35688888754         1245666


Q ss_pred             hcCc---CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHH---HHHh---hCccccccceeeecccc-c-Cc
Q 011973          292 NSLP---KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKL---RIPVEAQHNLVLSTSYA-A-HK  360 (474)
Q Consensus       292 ~~ip---~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~---~l~~---~~~~~~~~~l~~~t~~~-~-~~  360 (474)
                      +...   -+..+|+++|... +.+++..+..+++-|.++.+-.++.|+   .+.+   +...+.+..+...++.+ + ++
T Consensus       147 e~~g~~~l~gl~va~vGD~~-~~v~~S~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~  225 (334)
T PRK12562        147 EHLPGKAFNEMTLVYAGDAR-NNMGNSMLEAAALTGLDLRLVAPQACWPEASLVAECSALAQKHGGKITLTEDIAAGVKG  225 (334)
T ss_pred             HHhCCCCcCCcEEEEECCCC-CCHHHHHHHHHHHcCCEEEEECCcccCCcHHHHHHHHHHHHHcCCeEEEEcCHHHHhCC
Confidence            6553   2357999999863 468999999888999999983333322   1111   11222333322223444 4 88


Q ss_pred             eeEEEEcCcCChhhhhc--CCCCceeecccccCcc--CC--CCCeee-ecCCcc
Q 011973          361 TKIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR--KL--RKDCFY-HSTPAM  407 (474)
Q Consensus       361 ~~vwivg~~i~~~eq~~--a~~G~~f~~~~~v~p~--~~--R~dc~y-~~~~am  407 (474)
                      ++|+..+.|.+..+|..  ...-..|-+| |++++  +.  |+||.+ |.+|+.
T Consensus       226 aDvvyt~~w~sm~~~~~~~~~~~~~~~~y-~v~~ell~~a~~~~~i~mHcLP~~  278 (334)
T PRK12562        226 ADFIYTDVWVSMGEPKEKWAERIALLRGY-QVNSKMMALTGNPQVKFLHCLPAF  278 (334)
T ss_pred             CCEEEEcCccccccchhhHHHHHHhccCC-cCCHHHHHhhcCCCCEEECCCCCC
Confidence            88888877765443311  0111345566 48888  33  688875 888873

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=87.97  E-value=0.61  Score=49.04  Aligned_cols=43  Identities=21%  Similarity=0.222  Sum_probs=34.8

Q ss_pred             HhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhH
Q 011973          291 VNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  335 (474)
Q Consensus       291 l~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~  335 (474)
                      ..+.+....+|+|+|+||  -||+++++.|.++|.+|..  |+.++.
T Consensus        53 ~~~~~~~~~kVLVtGatG--~IG~~l~~~Ll~~G~~V~~l~R~~~~~   97 (390)
T PLN02657         53 FRSKEPKDVTVLVVGATG--YIGKFVVRELVRRGYNVVAVAREKSGI   97 (390)
T ss_pred             ccccCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEEechhhc
Confidence            334444567899999999  9999999999999999988  665543

>PRK00779 ornithine carbamoyltransferase; Provisional

Probab=87.97  E-value=3.6  Score=42.36  Aligned_cols=162  Identities=19%  Similarity=0.229  Sum_probs=94.6

Q ss_pred             HHHHcCCcEEEecc----ccccccc-------cccCceeeecCCC---------CcceeeecCCh---------hHHHHH
Q 011973          240 EADAKGVKVISLGL----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVV  290 (474)
Q Consensus       240 ~A~k~G~kV~~LG~----ln~~e~l-------n~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvv  290 (474)
                      -|.++|.+++.|+.    +.++|.+       ....-+.+.|+|+         ..+++|+.+-+         +=+.++
T Consensus        64 A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~~D~iv~R~~~~~~~~~~a~~~~vPVINag~~~~HPtQaL~Dl~Ti  143 (304)
T PRK00779         64 GMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRYVDAIMIRTFEHETLEELAEYSTVPVINGLTDLSHPCQILADLLTI  143 (304)
T ss_pred             HHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHhCCEEEEcCCChhHHHHHHHhCCCCEEeCCCCCCChHHHHHHHHHH
Confidence            35789999999964    3335554       4446677888887         34567776543         113444


Q ss_pred             HhcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHH---HHHhhCccccccceeeec-ccc-c-CceeE
Q 011973          291 VNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYA-A-HKTKI  363 (474)
Q Consensus       291 l~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~---~l~~~~~~~~~~~l~~~t-~~~-~-~~~~v  363 (474)
                      .+.... +..+|.++|..+  .+.+..+..|.+-|.+|.+-.++.++   .+.+++..+.+.. +..+ +.+ + ++++|
T Consensus       144 ~e~~g~l~gl~i~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~~aDv  220 (304)
T PRK00779        144 YEHRGSLKGLKVAWVGDGN--NVANSLLLAAALLGFDLRVATPKGYEPDPEIVEKIAKETGAS-IEVTHDPKEAVKGADV  220 (304)
T ss_pred             HHHhCCcCCcEEEEEeCCC--ccHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHcCCe-EEEEcCHHHHhCCCCE
Confidence            444332 346899999965  89999999999999999994444332   2222212223333 3334 434 4 88888


Q ss_pred             EEEcCcCChhh---hhcCCCCceeecccccCcc---CCCCCee-eecCCcc
Q 011973          364 WLVGDDLTGKE---QARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM  407 (474)
Q Consensus       364 wivg~~i~~~e---q~~a~~G~~f~~~~~v~p~---~~R~dc~-y~~~~am  407 (474)
                      +....|....+   |....  ..+-+| +++.+   ..|+|+. .|.+|+.
T Consensus       221 vy~~~w~~~~~~~~~~~~~--~~~~~y-~v~~~~l~~~~~~~ivmHplP~~  268 (304)
T PRK00779        221 VYTDVWVSMGQEAEAEERL--KAFAPY-QVNEELMALAKPDAIFMHCLPAH  268 (304)
T ss_pred             EEecCccccccchhHHHHH--HHhccc-CCCHHHHHhcCCCeEEecCCCcc
Confidence            88766554321   10000  112233 37766   4567766 4777753

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=87.94  E-value=1.5  Score=36.26  Aligned_cols=30  Identities=27%  Similarity=0.361  Sum_probs=25.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhcc-CcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l  329 (474)
                      ..+++.++|+ |  .+|+.++++|++. +.++.+
T Consensus        22 ~~~~v~i~G~-G--~~g~~~a~~l~~~~~~~v~v   52 (86)
T cd05191          22 KGKTVVVLGA-G--EVGKGIAKLLADEGGKKVVL   52 (86)
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEE
Confidence            4678999999 7  9999999999987 667777

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=87.82  E-value=0.72  Score=43.93  Aligned_cols=31  Identities=26%  Similarity=0.357  Sum_probs=28.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ..+.++++|++|  -||+++|+.|+++|.+|.+
T Consensus         7 ~~k~vlItGas~--~iG~~la~~l~~~G~~v~~   37 (252)
T PRK08220          7 SGKTVWVTGAAQ--GIGYAVALAFVEAGAKVIG   37 (252)
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence            347899999998  9999999999999999998

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=87.77  E-value=0.73  Score=46.23  Aligned_cols=39  Identities=21%  Similarity=0.185  Sum_probs=34.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      ++|.++|+-   .+|+++|..|++.|.+|++  +++++.+++++
T Consensus         5 ~kI~vIGaG---~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (292)
T PRK07530          5 KKVGVIGAG---QMGNGIAHVCALAGYDVLLNDVSADRLEAGLA   45 (292)
T ss_pred             CEEEEECCc---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            579999986   8999999999999999999  88888877554

>PLN02928 oxidoreductase family protein

Probab=87.74  E-value=1.3  Score=46.28  Aligned_cols=94  Identities=14%  Similarity=0.128  Sum_probs=59.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccce----eeeccccc--CceeEEEE--
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNL----VLSTSYAA--HKTKIWLV--  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l----~~~t~~~~--~~~~vwiv--  366 (474)
                      ..++|.++|.-   .||+++|+.|...|.+|+.  |+.++-..-...++...-..+    ....++++  +.+|++++  
T Consensus       158 ~gktvGIiG~G---~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l  234 (347)
T PLN02928        158 FGKTVFILGYG---AIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC  234 (347)
T ss_pred             CCCEEEEECCC---HHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence            46789999985   9999999999999999988  332211110000010000000    01113433  66777663  


Q ss_pred             ------cCcCChhhhhcCCCCceeecccc---cCcc
Q 011973          367 ------GDDLTGKEQARAPKGTIFIPYTQ---IPPR  393 (474)
Q Consensus       367 ------g~~i~~~eq~~a~~G~~f~~~~~---v~p~  393 (474)
                            -..|+.++..+||+|+++|.++|   |+.+
T Consensus       235 Plt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVde~  270 (347)
T PLN02928        235 TLTKETAGIVNDEFLSSMKKGALLVNIARGGLLDYD  270 (347)
T ss_pred             CCChHhhcccCHHHHhcCCCCeEEEECCCccccCHH
Confidence                  34677889999999999999999   5544

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=87.73  E-value=1.1  Score=45.71  Aligned_cols=64  Identities=20%  Similarity=0.306  Sum_probs=43.4

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcccc---ccc-eeeeccccc-CceeEEEE
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA---QHN-LVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~~---~~~-l~~~t~~~~-~~~~vwiv  366 (474)
                      +|.++|+ |  .+|+++|..|+++|.  ++.+  +++++.+.+..++....   ..+ .+....+++ ++++++|+
T Consensus         2 kI~IIGa-G--~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIi   74 (306)
T cd05291           2 KVVIIGA-G--HVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVI   74 (306)
T ss_pred             EEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEE
Confidence            7899997 5  899999999998885  5666  77887777766653221   111 123334444 78877664

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PLN03139 formate dehydrogenase; Provisional

Probab=87.73  E-value=0.86  Score=48.53  Aligned_cols=99  Identities=13%  Similarity=0.153  Sum_probs=64.5

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE-----
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-----  366 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv-----  366 (474)
                      -..++|.++|. |  .||+++|+.|...|.+|..  ++..+-+.. ++..      .....++++  +.++++++     
T Consensus       197 L~gktVGIVG~-G--~IG~~vA~~L~afG~~V~~~d~~~~~~~~~-~~~g------~~~~~~l~ell~~sDvV~l~lPlt  266 (386)
T PLN03139        197 LEGKTVGTVGA-G--RIGRLLLQRLKPFNCNLLYHDRLKMDPELE-KETG------AKFEEDLDAMLPKCDVVVINTPLT  266 (386)
T ss_pred             CCCCEEEEEee-c--HHHHHHHHHHHHCCCEEEEECCCCcchhhH-hhcC------ceecCCHHHHHhhCCEEEEeCCCC
Confidence            35678999995 6  9999999999999999988  332111111 1111      111224433  56666552     


Q ss_pred             ---cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCeeeecC
Q 011973          367 ---GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST  404 (474)
Q Consensus       367 ---g~~i~~~eq~~a~~G~~f~~~~~---v~p~---------~~R---~dc~y~~~  404 (474)
                         -..++.+...+|++|++||.++|   ++.+         +++   -|++.++-
T Consensus       267 ~~T~~li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~l~GAaLDV~~~EP  322 (386)
T PLN03139        267 EKTRGMFNKERIAKMKKGVLIVNNARGAIMDTQAVADACSSGHIGGYGGDVWYPQP  322 (386)
T ss_pred             HHHHHHhCHHHHhhCCCCeEEEECCCCchhhHHHHHHHHHcCCceEEEEcCCCCCC
Confidence               23356778899999999999999   4433         444   68887774

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=87.67  E-value=0.62  Score=43.97  Aligned_cols=30  Identities=27%  Similarity=0.346  Sum_probs=27.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.++++|++|  -||+++|+.|+++|.+|.+
T Consensus         5 ~k~~lVtGas~--~iG~~ia~~l~~~G~~v~~   34 (235)
T PRK06550          5 TKTVLITGAAS--GIGLAQARAFLAQGAQVYG   34 (235)
T ss_pred             CCEEEEcCCCc--hHHHHHHHHHHHCCCEEEE
Confidence            46799999998  9999999999999999988

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=87.65  E-value=0.78  Score=44.85  Aligned_cols=28  Identities=11%  Similarity=0.173  Sum_probs=25.1

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccC--cEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMG--IKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~--v~v~l  329 (474)
                      +|+++|+||  .||+++++.|.++|  .+|+.
T Consensus         1 ~ilItGatG--~iG~~l~~~l~~~~~~~~v~~   30 (317)
T TIGR01181         1 RILVTGGAG--FIGSNFVRYILNEHPDAEVIV   30 (317)
T ss_pred             CEEEEcCCc--hHHHHHHHHHHHhCCCCEEEE
Confidence            489999999  99999999999876  77876

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK12367 short chain dehydrogenase; Provisional

Probab=87.58  E-value=0.78  Score=44.96  Aligned_cols=33  Identities=18%  Similarity=0.244  Sum_probs=29.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  332 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~  332 (474)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |++
T Consensus        14 ~k~~lITGas~--gIG~ala~~l~~~G~~Vi~~~r~~   48 (245)
T PRK12367         14 GKRIGITGASG--ALGKALTKAFRAKGAKVIGLTHSK   48 (245)
T ss_pred             CCEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEECCc
Confidence            46899999998  9999999999999999987  554

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=87.48  E-value=1  Score=42.92  Aligned_cols=45  Identities=22%  Similarity=0.343  Sum_probs=34.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh--HHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD--YEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~--~~~l~~~~~  343 (474)
                      ..+.|+++|+++  -||+++|+.|+++|.+|++  ++.++  .+.+.+...
T Consensus         4 ~~~~ilITGas~--GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~   52 (251)
T COG1028           4 SGKVALVTGASS--GIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK   52 (251)
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH
Confidence            457899999997  8999999999999999776  54443  455555443

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=87.45  E-value=0.47  Score=46.05  Aligned_cols=32  Identities=19%  Similarity=0.279  Sum_probs=28.3

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      |+|+|++|  -||+++++.|.++|.+|..  |+.+.
T Consensus         1 vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~   34 (292)
T TIGR01777         1 ILITGGTG--FIGRALTQRLTKDGHEVTILTRSPPA   34 (292)
T ss_pred             CEEEcccc--hhhHHHHHHHHHcCCEEEEEeCCCCC
Confidence            68999999  9999999999999999987  65554

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=87.43  E-value=0.96  Score=42.31  Aligned_cols=27  Identities=22%  Similarity=0.397  Sum_probs=25.2

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      |+++||||  =||+++++.|.++|.+|+.
T Consensus         1 IlI~GatG--~iG~~l~~~l~~~g~~v~~   27 (236)
T PF01370_consen    1 ILITGATG--FIGSALVRQLLKKGHEVIV   27 (236)
T ss_dssp             EEEETTTS--HHHHHHHHHHHHTTTEEEE
T ss_pred             EEEEccCC--HHHHHHHHHHHHcCCcccc
Confidence            78999999  9999999999999999665

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=87.24  E-value=1.1  Score=44.68  Aligned_cols=44  Identities=18%  Similarity=0.288  Sum_probs=39.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+|+++|.++  -||++.|..+.+.|-+|++  |++++|++.+.+.|.
T Consensus         6 nTiLITGG~s--GIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~   51 (245)
T COG3967           6 NTILITGGAS--GIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE   51 (245)
T ss_pred             cEEEEeCCcc--hhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcc
Confidence            4688998774  8999999999999999999  999999999999776

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=86.90  E-value=1.5  Score=45.61  Aligned_cols=41  Identities=10%  Similarity=0.082  Sum_probs=33.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      +-++|.|+|+-   -+|+.+|..+++.|.+|++  ++.+..+.+++
T Consensus         6 ~i~~VaVIGaG---~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~   48 (321)
T PRK07066          6 DIKTFAAIGSG---VIGSGWVARALAHGLDVVAWDPAPGAEAALRA   48 (321)
T ss_pred             CCCEEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            34689999985   8999999999999999999  66666655443

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=86.76  E-value=0.55  Score=46.34  Aligned_cols=33  Identities=30%  Similarity=0.322  Sum_probs=29.3

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      +|+++|++|  -||+.+++.|.++|.+|..  |+.++
T Consensus         2 ~vlItG~~G--~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (328)
T TIGR03466         2 KVLVTGATG--FVGSAVVRLLLEQGEEVRVLVRPTSD   36 (328)
T ss_pred             eEEEECCcc--chhHHHHHHHHHCCCEEEEEEecCcc
Confidence            689999999  9999999999999999988  65554

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=86.65  E-value=1.6  Score=42.56  Aligned_cols=33  Identities=15%  Similarity=0.143  Sum_probs=30.3

Q ss_pred             cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          295 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       295 p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +-.-++|+++|...  -||+-+|..|.++|-.|++
T Consensus        59 ~l~GK~vvVIGrS~--iVGkPla~lL~~~~AtVti   91 (197)
T cd01079          59 RLYGKTITIINRSE--VVGRPLAALLANDGARVYS   91 (197)
T ss_pred             CCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEE
Confidence            45688999999997  9999999999999999998

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=86.59  E-value=1.7  Score=42.93  Aligned_cols=98  Identities=17%  Similarity=0.169  Sum_probs=61.7

Q ss_pred             hHHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccc-
Q 011973          285 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY-  356 (474)
Q Consensus       285 ltaAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~-  356 (474)
                      +||+..++.+.     ++...|++.|++|  .+|.++++.+...|.+|..  +++++.+.+++ ++.+.   ++...+. 
T Consensus       129 ~ta~~~l~~~~~~~~~~~~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~---v~~~~~~~  202 (326)
T cd08289         129 FTAALSIHRLEENGLTPEQGPVLVTGATG--GVGSLAVSILAKLGYEVVASTGKADAADYLKK-LGAKE---VIPREELQ  202 (326)
T ss_pred             HHHHHHHHHHHhcCCCCCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-cCCCE---EEcchhHH
Confidence            35555555432     2356899999998  9999999999999999887  78888888854 44322   2211111 


Q ss_pred             ----cc---CceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 011973          357 ----AA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       357 ----~~---~~~~vwi--vg~~i~~~eq~~a~~G~~f~~~~  388 (474)
                          +.   ..+++++  +|.....+-...++++-+|+.+.
T Consensus       203 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g  243 (326)
T cd08289         203 EESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSG  243 (326)
T ss_pred             HHHHHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEe
Confidence                11   2355665  33333334455667777788876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=86.53  E-value=3.1  Score=41.14  Aligned_cols=99  Identities=19%  Similarity=0.171  Sum_probs=60.1

Q ss_pred             hhHHHHHHhcC--cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--ccc
Q 011973          284 SLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYA  357 (474)
Q Consensus       284 sltaAvvl~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~~  357 (474)
                      -+||+-.+...  .+....|++.|++|  .+|.++++.+...|.+|..  +++++.+.+++ ++.+.   ++...  +..
T Consensus       128 ~~ta~~al~~~~~~~~g~~vlI~ga~g--~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga~~---vi~~~~~~~~  201 (329)
T cd08294         128 GLTAYFGLLEICKPKAGETVVVNGAAG--AVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGFDA---VFNYKTVSLE  201 (329)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCE---EEeCCCccHH
Confidence            35555444322  23457899999998  9999999988899999876  78888888876 44322   33222  111


Q ss_pred             -c------CceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 011973          358 -A------HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       358 -~------~~~~vwi--vg~~i~~~eq~~a~~G~~f~~~~  388 (474)
                       .      ...++++  +|.....+-...+++|-+++.+.
T Consensus       202 ~~v~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g  241 (329)
T cd08294         202 EALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCG  241 (329)
T ss_pred             HHHHHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEc
Confidence             1      2245555  33322233344556666677665

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR01746 Thioester-redct thioester reductase domain

Probab=86.52  E-value=0.87  Score=45.29  Aligned_cols=32  Identities=22%  Similarity=0.209  Sum_probs=26.9

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccC--cEEEe--cchh
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKD  333 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~--v~v~l--~~~~  333 (474)
                      +|+|+||||  -||+.+++.|.++|  .+|..  |+.+
T Consensus         1 ~vlvtGatG--~lG~~l~~~L~~~g~~~~V~~l~R~~~   36 (367)
T TIGR01746         1 TVLLTGATG--FLGAYLLEELLRRSTQAKVICLVRAAS   36 (367)
T ss_pred             CEEEeccch--HHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence            489999999  99999999999888  56665  6554

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=86.33  E-value=1.2  Score=45.96  Aligned_cols=82  Identities=22%  Similarity=0.246  Sum_probs=57.9

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhcc----CcEEEe-cchhhHHHHHhhCccccccceeeec
Q 011973          285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEKLKLRIPVEAQHNLVLST  354 (474)
Q Consensus       285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~----~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t  354 (474)
                      -|+..|++=+     +-.-++|+++|...  -||+-+|..|.++    +..|++ .++-+                    
T Consensus       139 cTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~T~--------------------  196 (297)
T PRK14167        139 CTPHGIQKLLAAAGVDTEGADVVVVGRSD--IVGKPMANLLIQKADGGNATVTVCHSRTD--------------------  196 (297)
T ss_pred             CCHHHHHHHHHHhCCCCCCCEEEEECCCc--ccHHHHHHHHhcCccCCCCEEEEeCCCCC--------------------
Confidence            3666666544     44678999999998  9999999999987    788888 21110                    


Q ss_pred             cccc--CceeEEEE--cC--cCChhhhhcCCCCceeecccccCc
Q 011973          355 SYAA--HKTKIWLV--GD--DLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       355 ~~~~--~~~~vwiv--g~--~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                      ++++  +.++|+|+  |+  .++++..   ++|+++||+. +.+
T Consensus       197 ~l~~~~~~ADIvIsAvGkp~~i~~~~i---k~gaiVIDvG-in~  236 (297)
T PRK14167        197 DLAAKTRRADIVVAAAGVPELIDGSML---SEGATVIDVG-INR  236 (297)
T ss_pred             CHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEcc-ccc
Confidence            1111  35666663  53  5777666   9999999998 655

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=86.30  E-value=2.9  Score=44.26  Aligned_cols=110  Identities=20%  Similarity=0.313  Sum_probs=70.7

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--cc-----------ccceeeecccc-c-Ccee
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--EA-----------QHNLVLSTSYA-A-HKTK  362 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~--~~-----------~~~l~~~t~~~-~-~~~~  362 (474)
                      +|.++|..   .+|.++|..|++.|.+|+.  +++++.+.|++....  +.           ..++...++++ + ++++
T Consensus         2 kI~vIGlG---~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~ad   78 (411)
T TIGR03026         2 KIAVIGLG---YVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDAD   78 (411)
T ss_pred             EEEEECCC---chhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCC
Confidence            58899975   8999999999999999999  888999888764211  00           11222233443 3 5665


Q ss_pred             EEE--EcCcCCh-------------hhh-hcCCCCceeecccccCcc---CC-------------CCCeeeecCCccccC
Q 011973          363 IWL--VGDDLTG-------------KEQ-ARAPKGTIFIPYTQIPPR---KL-------------RKDCFYHSTPAMIIP  410 (474)
Q Consensus       363 vwi--vg~~i~~-------------~eq-~~a~~G~~f~~~~~v~p~---~~-------------R~dc~y~~~~am~vP  410 (474)
                      ++|  |++...+             ++. ..+++|++++.-|-+||.   ++             ..||.+..+|..-.|
T Consensus        79 vvii~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~~~~~g~~~~~d~~v~~~Pe~~~~  158 (411)
T TIGR03026        79 VIIICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPILERASGLKLGEDFYLAYNPEFLRE  158 (411)
T ss_pred             EEEEEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHHHHHHHhhcCCCCCCCceEEECCCcCCC
Confidence            543  6654321             111 235889999998877776   11             136666777766666


Q ss_pred             CC
Q 011973          411 PS  412 (474)
Q Consensus       411 ~~  412 (474)
                      +.
T Consensus       159 G~  160 (411)
T TIGR03026       159 GN  160 (411)
T ss_pred             CC
Confidence            65

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=86.27  E-value=1.4  Score=45.72  Aligned_cols=83  Identities=20%  Similarity=0.176  Sum_probs=56.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEE--------Ec
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--------VG  367 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--------vg  367 (474)
                      .++|-++|.-   .||+++|..|..-|.+|+..++..-+.....   ..   .....++++  +.+|+++        --
T Consensus       142 gkTvGIiG~G---~IG~~va~~l~afgm~v~~~d~~~~~~~~~~---~~---~~~~~~Ld~lL~~sDiv~lh~PlT~eT~  212 (324)
T COG0111         142 GKTVGIIGLG---RIGRAVAKRLKAFGMKVIGYDPYSPRERAGV---DG---VVGVDSLDELLAEADILTLHLPLTPETR  212 (324)
T ss_pred             CCEEEEECCC---HHHHHHHHHHHhCCCeEEEECCCCchhhhcc---cc---ceecccHHHHHhhCCEEEEcCCCCcchh
Confidence            5688999976   8999999999999999999333211111100   00   112234443  5565544        23


Q ss_pred             CcCChhhhhcCCCCceeecccc
Q 011973          368 DDLTGKEQARAPKGTIFIPYTQ  389 (474)
Q Consensus       368 ~~i~~~eq~~a~~G~~f~~~~~  389 (474)
                      ..|+.++..+||+|++||-++|
T Consensus       213 g~i~~~~~a~MK~gailIN~aR  234 (324)
T COG0111         213 GLINAEELAKMKPGAILINAAR  234 (324)
T ss_pred             cccCHHHHhhCCCCeEEEECCC
Confidence            4577889999999999999999

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=86.24  E-value=1.1  Score=49.23  Aligned_cols=37  Identities=16%  Similarity=0.207  Sum_probs=32.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  338 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l  338 (474)
                      ++|.|+|+-   ..|+.||..|++.|.+|++  ++++.+++.
T Consensus         6 ~kV~VIGaG---~MG~gIA~~la~aG~~V~l~d~~~e~l~~~   44 (503)
T TIGR02279         6 VTVAVIGAG---AMGAGIAQVAASAGHQVLLYDIRAEALARA   44 (503)
T ss_pred             cEEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence            469999995   8999999999999999999  888887754

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>PRK02255 putrescine carbamoyltransferase; Provisional

Probab=86.21  E-value=9.1  Score=40.19  Aligned_cols=162  Identities=20%  Similarity=0.226  Sum_probs=94.1

Q ss_pred             HHHcCCcEEEecccc----ccccc-------cccCceeeecCCC---------CcceeeecCChh---------HHHHHH
Q 011973          241 ADAKGVKVISLGLLN----QGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSSL---------AAAVVV  291 (474)
Q Consensus       241 A~k~G~kV~~LG~ln----~~e~l-------n~~g~l~v~k~p~---------~L~irvv~Gnsl---------taAvvl  291 (474)
                      +.++|.+++.|+.=+    ++|.+       +...-+.+.|++.         ..+++|+.|-+=         =..++.
T Consensus        64 ~~~LGg~~i~l~~~~ss~~kgEsl~Dtarvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~  143 (338)
T PRK02255         64 MTQLGGHAQYLAPGQIQLGGHESLEDTARVLSRLVDIIMARVDRHQTVVELAKYATVPVINGMSDYNHPTQELGDLFTMI  143 (338)
T ss_pred             HHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHhCcEEEEecCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence            457999999986433    24443       4445556666654         345788877551         245666


Q ss_pred             hcCc----CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhH-------HHHHhhCccccccceeeec-ccc-c
Q 011973          292 NSLP----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-------EKLKLRIPVEAQHNLVLST-SYA-A  358 (474)
Q Consensus       292 ~~ip----~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~-------~~l~~~~~~~~~~~l~~~t-~~~-~  358 (474)
                      +..+    -+..+|.++|..+  .+.+..+..|++-|.+|.+-.++.|       +.+++.+. .++.. +..+ +.+ +
T Consensus       144 e~~g~g~~l~glkv~~vGD~~--~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~-~~g~~-~~~~~d~~ea  219 (338)
T PRK02255        144 EHLPEGKKLEDCKVVFVGDAT--QVCVSLMFIATKMGMDFVHFGPKGYQLPEEHLAIAEENCE-VSGGS-VLVTDDVDEA  219 (338)
T ss_pred             HHhCCCCCCCCCEEEEECCCc--hHHHHHHHHHHhCCCEEEEECCCccccCHHHHHHHHHHHH-hcCCe-EEEEcCHHHH
Confidence            6653    2356999999975  8999999999999999999333322       22222211 22233 3333 444 4


Q ss_pred             -CceeEEEEcCcCChhhhhcCC-C-Cceeec-ccccCcc---CCCCCee-eecCCcc
Q 011973          359 -HKTKIWLVGDDLTGKEQARAP-K-GTIFIP-YTQIPPR---KLRKDCF-YHSTPAM  407 (474)
Q Consensus       359 -~~~~vwivg~~i~~~eq~~a~-~-G~~f~~-~~~v~p~---~~R~dc~-y~~~~am  407 (474)
                       ++++|+..+-|.+...|...+ + =..|.| | |++++   ..++||. .|.+|+.
T Consensus       220 v~~aDvvy~~~w~~~~~~~~~~~~r~~~~~~~y-~v~~ell~~a~~~~ivmHpLP~~  275 (338)
T PRK02255        220 VKDADFVYTDVWYGLYDAELSEEERMAIFYPKY-QVTPELMAKAGPHAKFMHCLPAT  275 (338)
T ss_pred             hCCCCEEEEcccHhhccchhhHHHHHHhhCCCc-eECHHHHhccCCCCEEeCCCCCc
Confidence             788887775555211110000 0 012233 4 48877   4568887 4888863

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=85.89  E-value=0.86  Score=47.98  Aligned_cols=89  Identities=22%  Similarity=0.221  Sum_probs=61.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-cccc--CceeEEE--EcCcC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA--HKTKIWL--VGDDL  370 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t-~~~~--~~~~vwi--vg~~i  370 (474)
                      .....+.||||  =.|.-||++||++|.+-.|  ||.++++.|.++|+.+.+..=+-+. ..++  ...+|+|  ||-..
T Consensus         6 e~d~iiYGAtG--y~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt   83 (382)
T COG3268           6 EYDIIIYGATG--YAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPYT   83 (382)
T ss_pred             ceeEEEEcccc--chhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEecccccc
Confidence            45788999999  9999999999999999988  9999999999999998876533211 2233  5557777  44332


Q ss_pred             Chhh---hhcCCCCceeeccc
Q 011973          371 TGKE---QARAPKGTIFIPYT  388 (474)
Q Consensus       371 ~~~e---q~~a~~G~~f~~~~  388 (474)
                      .--+   -.=+-.||+++|.+
T Consensus        84 ~~g~plv~aC~~~GTdY~DiT  104 (382)
T COG3268          84 RYGEPLVAACAAAGTDYADIT  104 (382)
T ss_pred             ccccHHHHHHHHhCCCeeecc
Confidence            1111   11234566666654

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=85.80  E-value=1.4  Score=44.92  Aligned_cols=33  Identities=15%  Similarity=0.218  Sum_probs=27.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ..+.++++|+...+-||+|+|+.|+++|-+|.+
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv   39 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILV   39 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEE
Confidence            456789999951147999999999999999999

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=85.59  E-value=1.6  Score=45.71  Aligned_cols=103  Identities=17%  Similarity=0.168  Sum_probs=71.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccc--c-c-CceeEEE------
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY--A-A-HKTKIWL------  365 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~--~-~-~~~~vwi------  365 (474)
                      .++|.+.|.-   -+|.--|+...-.|-+|++  +|-+|+..|.......  ...+.+|..  + + ..+|++|      
T Consensus       168 ~~kv~iiGGG---vvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~r--v~~~~st~~~iee~v~~aDlvIgaVLIp  242 (371)
T COG0686         168 PAKVVVLGGG---VVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGR--VHTLYSTPSNIEEAVKKADLVIGAVLIP  242 (371)
T ss_pred             CccEEEECCc---cccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCce--eEEEEcCHHHHHHHhhhccEEEEEEEec
Confidence            4578888876   7899999999999999999  8999999987773332  223345522  3 2 4444444      


Q ss_pred             ---EcCcCChhhhhcCCCCceeecccccCcc----CCC----CCeeeecCCc
Q 011973          366 ---VGDDLTGKEQARAPKGTIFIPYTQIPPR----KLR----KDCFYHSTPA  406 (474)
Q Consensus       366 ---vg~~i~~~eq~~a~~G~~f~~~~~v~p~----~~R----~dc~y~~~~a  406 (474)
                         .=+-++.|.++.|+||++.+|++ ++.-    ..|    +|=+|.+-+.
T Consensus       243 gakaPkLvt~e~vk~MkpGsVivDVA-iDqGGc~Et~~~TTh~~PtY~~~gv  293 (371)
T COG0686         243 GAKAPKLVTREMVKQMKPGSVIVDVA-IDQGGCFETSHPTTHDDPTYEVDGV  293 (371)
T ss_pred             CCCCceehhHHHHHhcCCCcEEEEEE-EcCCCceeccccccCCCCceeecCE
Confidence               22456778899999999999999 7664    223    5555555544

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=85.57  E-value=0.97  Score=46.93  Aligned_cols=25  Identities=8%  Similarity=0.203  Sum_probs=22.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI  325 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v  325 (474)
                      -+|.++||+|  .||+++|..|+.+++
T Consensus         4 ~KV~IIGa~G--~VG~~~a~~l~~~~~   28 (323)
T TIGR01759         4 VRVAVTGAAG--QIGYSLLFRIASGEL   28 (323)
T ss_pred             eEEEEECCCc--HHHHHHHHHHHhCCc
Confidence            4799999999  999999999997776

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=85.42  E-value=1.4  Score=44.46  Aligned_cols=40  Identities=13%  Similarity=0.287  Sum_probs=35.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      ++|.++|+.   .+|+++|..|.+.|.+|++  +++++.++++++
T Consensus         5 ~~I~vIGaG---~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~   46 (311)
T PRK06130          5 QNLAIIGAG---TMGSGIAALFARKGLQVVLIDVMEGALERARGV   46 (311)
T ss_pred             cEEEEECCC---HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence            579999995   8999999999999999999  788888888764

>KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism]

Probab=85.28  E-value=1.2  Score=44.02  Aligned_cols=61  Identities=25%  Similarity=0.434  Sum_probs=39.5

Q ss_pred             HHHHHHHHHHHHHhhhccccceecccccccCCCceeeccCcchhhhhhhC-CCCCcccchhHHHHhcCCCCCC
Q 011973           41 SFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTIDRS  112 (474)
Q Consensus        41 ~i~~y~l~~~~~~~~gHsNve~~P~~l~~~~p~Lkyli~TP~~H~lHHs~-~~~NYg~~f~lWDrLFGT~~~~  112 (474)
                      .+++|+.+-...=.+.|.+-.   .     -|.++   .--.||.=||=+ .+.-||..-++||+.|||.-..
T Consensus       172 ~l~GYV~YDmtHYyLHhg~p~---~-----~~~~~---~lK~yHl~HHfk~q~~GfGItS~lWD~VFgTl~~~  233 (240)
T KOG0539|consen  172 GLLGYVCYDMTHYYLHHGSPP---K-----RPYLK---HLKKYHLNHHFKHQDLGFGITSSLWDYVFGTLGPL  233 (240)
T ss_pred             chhhhhhhhhhhhhhhcCCCC---C-----chHHH---HHHHHHhhhhhhccccCccccHHHHHHHhccCCCC
Confidence            345666665555555555321   1     01222   224577777755 8999999999999999999654

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=85.16  E-value=1.7  Score=42.70  Aligned_cols=114  Identities=13%  Similarity=0.147  Sum_probs=64.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcE---EEe--cc----hhhH---HHHHhhCccccccceeeeccc-cc-Ccee
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIK---VAT--IC----KDDY---EKLKLRIPVEAQHNLVLSTSY-AA-HKTK  362 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~---v~l--~~----~~~~---~~l~~~~~~~~~~~l~~~t~~-~~-~~~~  362 (474)
                      ...+|++.||-   ..|++||..|.+.|++   +.+  |+    ++|-   ...|+++.++....-.. .++ ++ ++++
T Consensus        24 ~~~rvlvlGAG---gAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~~~-~~l~~~l~~~d   99 (226)
T cd05311          24 EEVKIVINGAG---AAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEKTG-GTLKEALKGAD   99 (226)
T ss_pred             cCCEEEEECch---HHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCccc-CCHHHHHhcCC
Confidence            46799999995   7999999999999985   767  55    3442   22222222211100010 133 23 5567


Q ss_pred             EEEE---cCcCChhhhhcCCCCceeecccccCcc-----C-CCCCe-eeecCCccccCCCCccc
Q 011973          363 IWLV---GDDLTGKEQARAPKGTIFIPYTQIPPR-----K-LRKDC-FYHSTPAMIIPPSLSNM  416 (474)
Q Consensus       363 vwiv---g~~i~~~eq~~a~~G~~f~~~~~v~p~-----~-~R~dc-~y~~~~am~vP~~~~~~  416 (474)
                      ++|-   .-.++++..+.|.++.++.|.+ -|..     + .+..| ++.++..| +|.--+|+
T Consensus       100 vlIgaT~~G~~~~~~l~~m~~~~ivf~ls-nP~~e~~~~~A~~~ga~i~a~G~~~-~~~Q~nn~  161 (226)
T cd05311         100 VFIGVSRPGVVKKEMIKKMAKDPIVFALA-NPVPEIWPEEAKEAGADIVATGRSD-FPNQVNNV  161 (226)
T ss_pred             EEEeCCCCCCCCHHHHHhhCCCCEEEEeC-CCCCcCCHHHHHHcCCcEEEeCCCC-Ccccccee
Confidence            7661   2236677777777777666887 3322     1 12467 46666444 44444443

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>cd00704 MDH Malate dehydrogenase

Probab=85.11  E-value=0.99  Score=46.78  Aligned_cols=24  Identities=17%  Similarity=0.325  Sum_probs=21.5

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCc
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGI  325 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v  325 (474)
                      +|.++||+|  .||+.+|..|+.+++
T Consensus         2 KV~IiGAaG--~VG~~~a~~L~~~~~   25 (323)
T cd00704           2 HVLITGAAG--QIGYNLLFLIASGEL   25 (323)
T ss_pred             EEEEECCCc--HHHHHHHHHHHhCCc
Confidence            689999999  999999999997664

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=85.05  E-value=2.4  Score=43.67  Aligned_cols=100  Identities=18%  Similarity=0.146  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHHHHHHHcCCcE--EEeccccc-------cccccccC---ceeeec-CCCCcce----------eeecCCh
Q 011973          228 EAINSLIEEAILEADAKGVKV--ISLGLLNQ-------GEELNRNG---EIYLER-QPNKLKI----------KVVDGSS  284 (474)
Q Consensus       228 ~~in~~Ie~Ai~~A~k~G~kV--~~LG~ln~-------~e~ln~~g---~l~v~k-~p~~L~i----------rvv~Gns  284 (474)
                      .+-+.-+...++.|++.|+++  .-|-.-.+       -++||.|-   ++.++. -|+|++.          +=|||=+
T Consensus        44 ~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~  123 (296)
T PRK14188         44 PASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLH  123 (296)
T ss_pred             hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCC
Confidence            344555666777888888874  34432222       34566663   333331 1332331          2245543


Q ss_pred             ----------------hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          285 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       285 ----------------ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                                      -|++.|++=+     +-.-++|.++|.++  -+|+.+|+.|.++|..|++
T Consensus       124 ~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~--~mG~PmA~~L~~~g~tVtv  187 (296)
T PRK14188        124 VVNAGRLATGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSN--LVGKPMAQLLLAANATVTI  187 (296)
T ss_pred             hhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCc--chHHHHHHHHHhCCCEEEE
Confidence                            2566666433     44688999999998  9999999999999999999

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=85.02  E-value=3.9  Score=39.50  Aligned_cols=41  Identities=20%  Similarity=0.205  Sum_probs=35.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      .+.|++.|+.|  .+|.++++.+...|.++.+  +++++.+.+++
T Consensus       145 g~~vlI~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~  187 (325)
T cd08253         145 GETVLVHGGSG--AVGHAAVQLARWAGARVIATASSAEGAELVRQ  187 (325)
T ss_pred             CCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            47899999987  9999999999999999888  77777777743

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=84.98  E-value=3.1  Score=40.02  Aligned_cols=42  Identities=19%  Similarity=0.269  Sum_probs=35.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      ....|++.|++|  .+|.++++.+...|.++.+  +++++.+.+++
T Consensus       139 ~~~~vlv~g~~~--~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~  182 (323)
T cd05276         139 AGETVLIHGGAS--GVGTAAIQLAKALGARVIATAGSEEKLEACRA  182 (323)
T ss_pred             CCCEEEEEcCcC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence            356899999987  9999999999999999887  77788877743

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=84.78  E-value=2.6  Score=42.49  Aligned_cols=99  Identities=15%  Similarity=0.122  Sum_probs=62.8

Q ss_pred             hHHHHHHhcC--cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec---ccc
Q 011973          285 LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST---SYA  357 (474)
Q Consensus       285 ltaAvvl~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t---~~~  357 (474)
                      +||+..+...  .+....|++.|++|  -||.++++++..+|.+|..  ++.++.+.++++++.+.   ++..+   ++.
T Consensus       137 ~tA~~~l~~~~~~~~g~~VlI~Ga~G--~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~---vi~~~~~~~~~  211 (338)
T cd08295         137 LTAYAGFYEVCKPKKGETVFVSAASG--AVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDD---AFNYKEEPDLD  211 (338)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCce---eEEcCCcccHH
Confidence            5555555332  23457899999998  9999999988899999876  78889888887555432   23211   111


Q ss_pred             -c------CceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 011973          358 -A------HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       358 -~------~~~~vwi--vg~~i~~~eq~~a~~G~~f~~~~  388 (474)
                       .      ...++++  +|....++-.....+|-.++.+.
T Consensus       212 ~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G  251 (338)
T cd08295         212 AALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACG  251 (338)
T ss_pred             HHHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEec
Confidence             1      2345555  34333334445566777777765

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=84.76  E-value=1  Score=45.48  Aligned_cols=30  Identities=17%  Similarity=0.185  Sum_probs=27.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.|+|+|++|  -||+++++.|.++|.+|..
T Consensus         6 ~~~vlVTGatG--fiG~~l~~~L~~~G~~V~~   35 (340)
T PLN02653          6 RKVALITGITG--QDGSYLTEFLLSKGYEVHG   35 (340)
T ss_pred             CCEEEEECCCC--ccHHHHHHHHHHCCCEEEE
Confidence            35799999999  9999999999999999987

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=84.76  E-value=2.7  Score=44.36  Aligned_cols=39  Identities=18%  Similarity=0.306  Sum_probs=34.7

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      +|+++|+ |  .+|+++|+.|.++|.++.+  +++++.+.++++
T Consensus         2 ~viIiG~-G--~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~   42 (453)
T PRK09496          2 KIIIVGA-G--QVGYTLAENLSGENNDVTVIDTDEERLRRLQDR   42 (453)
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh
Confidence            6899998 6  9999999999999999998  788888888763

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=84.72  E-value=1.1  Score=39.07  Aligned_cols=33  Identities=15%  Similarity=0.186  Sum_probs=26.8

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKD  333 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~  333 (474)
                      +.++++|++|  -||+++++.|+++|. .|.+  |+++
T Consensus         1 ~~~li~Ga~~--~iG~~~~~~l~~~g~~~v~~~~r~~~   36 (180)
T smart00822        1 GTYLITGGLG--GLGLELARWLAERGARHLVLLSRSGP   36 (180)
T ss_pred             CEEEEEcCCC--hHHHHHHHHHHHhhCCeEEEEeCCCC
Confidence            3689999998  999999999998886 4555  5444

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=84.70  E-value=1.6  Score=44.18  Aligned_cols=102  Identities=13%  Similarity=0.082  Sum_probs=63.6

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--EcCc-CCh
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VGDD-LTG  372 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg~~-i~~  372 (474)
                      +|.++|. |  .+|.++|+.|.+.|.+|.+  |++++.+.++++-....    ....+.. . +.+++++  +-+. +++
T Consensus         2 ~Ig~IGl-G--~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~----~s~~~~~~~~~~~dvIi~~vp~~~~~~   74 (298)
T TIGR00872         2 QLGLIGL-G--RMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGV----ANLRELSQRLSAPRVVWVMVPHGIVDA   74 (298)
T ss_pred             EEEEEcc-h--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCccc----CCHHHHHhhcCCCCEEEEEcCchHHHH
Confidence            5889996 5  9999999999999999998  89999998887521111    0011111 1 3455543  2111 111


Q ss_pred             --hh-hhcCCCCceeecccccCccCC--------CCCeeeecCCccc
Q 011973          373 --KE-QARAPKGTIFIPYTQIPPRKL--------RKDCFYHSTPAMI  408 (474)
Q Consensus       373 --~e-q~~a~~G~~f~~~~~v~p~~~--------R~dc~y~~~~am~  408 (474)
                        ++ ....++|.++++.+-.+|...        ++.+.|.+.|++-
T Consensus        75 v~~~l~~~l~~g~ivid~st~~~~~t~~~~~~~~~~g~~~vda~vsG  121 (298)
T TIGR00872        75 VLEELAPTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGIHLLDCGTSG  121 (298)
T ss_pred             HHHHHHhhCCCCCEEEECCCCCcccHHHHHHHHHhcCCeEEecCCCC
Confidence              12 223578999999987665511        1456788877654

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK07574 formate dehydrogenase; Provisional

Probab=84.69  E-value=1.6  Score=46.41  Aligned_cols=98  Identities=13%  Similarity=0.214  Sum_probs=63.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------  366 (474)
                      ..++|.++|.-   .||+++|+.|...|.+|..  |+... ....++..      +....++++  +.++++++      
T Consensus       191 ~gktVGIvG~G---~IG~~vA~~l~~fG~~V~~~dr~~~~-~~~~~~~g------~~~~~~l~ell~~aDvV~l~lPlt~  260 (385)
T PRK07574        191 EGMTVGIVGAG---RIGLAVLRRLKPFDVKLHYTDRHRLP-EEVEQELG------LTYHVSFDSLVSVCDVVTIHCPLHP  260 (385)
T ss_pred             CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCCc-hhhHhhcC------ceecCCHHHHhhcCCEEEEcCCCCH
Confidence            45679999985   8999999999999999988  33211 11111111      111224433  66766552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCeeeecC
Q 011973          367 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST  404 (474)
Q Consensus       367 --g~~i~~~eq~~a~~G~~f~~~~~---v~p~---------~~R---~dc~y~~~  404 (474)
                        -..++.+.+..|++|+.||.++|   ++.+         .++   -|++.++-
T Consensus       261 ~T~~li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~i~GAaLDV~~~EP  315 (385)
T PRK07574        261 ETEHLFDADVLSRMKRGSYLVNTARGKIVDRDAVVRALESGHLAGYAGDVWFPQP  315 (385)
T ss_pred             HHHHHhCHHHHhcCCCCcEEEECCCCchhhHHHHHHHHHhCCccEEEEecCCCCC
Confidence              23456788899999999999999   4333         444   57777664

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=84.64  E-value=1.2  Score=46.97  Aligned_cols=38  Identities=18%  Similarity=0.217  Sum_probs=32.3

Q ss_pred             hcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEecc
Q 011973          292 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC  331 (474)
Q Consensus       292 ~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~  331 (474)
                      +.+++...+|.++|.+|  .+|..+|+.|.+.|..|.+.+
T Consensus        92 ~~~~~~~~~I~IiGG~G--lmG~slA~~l~~~G~~V~~~d  129 (374)
T PRK11199         92 KTLNPDLRPVVIVGGKG--QLGRLFAKMLTLSGYQVRILE  129 (374)
T ss_pred             cccCcccceEEEEcCCC--hhhHHHHHHHHHCCCeEEEeC
Confidence            44455668899999999  999999999999999999933

>PLN02527 aspartate carbamoyltransferase

Probab=84.60  E-value=9.5  Score=39.39  Aligned_cols=159  Identities=15%  Similarity=0.226  Sum_probs=94.9

Q ss_pred             HHHcCCcEEEecc------ccccccc-------cccCceeeecCCC---------CcceeeecCCh----------hHHH
Q 011973          241 ADAKGVKVISLGL------LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS----------LAAA  288 (474)
Q Consensus       241 A~k~G~kV~~LG~------ln~~e~l-------n~~g~l~v~k~p~---------~L~irvv~Gns----------ltaA  288 (474)
                      +.++|.+++.|+.      +.++|.+       .+..-+.+.|+|+         ...++|+.+-+          .=+.
T Consensus        61 ~~~LGg~~i~l~~~~~~s~~~kgEs~~Dta~vls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQ~LaDl~  140 (306)
T PLN02527         61 MKRLGGEVLTTENAGEFSSAAKGETLEDTIRTVEGYSDIIVLRHFESGAARRAAATAEIPVINAGDGPGQHPTQALLDVY  140 (306)
T ss_pred             HHHcCCCEEEeCCCCCccccCCCcCHHHHHHHHHHhCcEEEEECCChhHHHHHHHhCCCCEEECCCCCCCChHHHHHHHH
Confidence            4589999999965      2235655       6777788889986         35688887622          1245


Q ss_pred             HHHhcCcC-CCcEEEEeccCCCchhHHHHHHHHhcc-CcEEEecchhhHH---HHHhhCccccccceeeec-ccc-c-Cc
Q 011973          289 VVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYA-A-HK  360 (474)
Q Consensus       289 vvl~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l~~~~~~~---~l~~~~~~~~~~~l~~~t-~~~-~-~~  360 (474)
                      ++.+.... +..+|+++|...-+.+.+..+..|++. |..+.+-.++.|+   .+.+++. +.+.. +..+ +.+ + ++
T Consensus       141 Ti~e~~g~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~-~~g~~-~~~~~d~~~a~~~  218 (306)
T PLN02527        141 TIQREIGRLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDVVKMKDDIKDYLT-SKGVE-WEESSDLMEVASK  218 (306)
T ss_pred             HHHHHhCCcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCccCCCHHHHHHHH-HcCCE-EEEEcCHHHHhCC
Confidence            55555432 457999999863137889999988876 9999883333332   2222221 23333 3344 444 4 88


Q ss_pred             eeEEEEcCcCChhhhhcCCCCcee----ecccccCcc---CCCCCee-eecCC
Q 011973          361 TKIWLVGDDLTGKEQARAPKGTIF----IPYTQIPPR---KLRKDCF-YHSTP  405 (474)
Q Consensus       361 ~~vwivg~~i~~~eq~~a~~G~~f----~~~~~v~p~---~~R~dc~-y~~~~  405 (474)
                      ++|+.. ++++.|+..  .+-..+    =+| |++.+   ..|+||. .|.+|
T Consensus       219 aDvvyt-~~~q~e~~~--~~~~~~~~~~~~y-~v~~~ll~~a~~~~ivmHclP  267 (306)
T PLN02527        219 CDVLYQ-TRIQRERFG--ERIDLYEAARGKY-IVDKKVMDVLPKHAVVMHPLP  267 (306)
T ss_pred             CCEEEE-CCcchhhhc--chHHHHHHhCCCc-eECHHHHhccCCCCEEECCCC
Confidence            988887 455533210  000111    123 37776   4567874 56666

>PLN00016 RNA-binding protein; Provisional

Probab=84.54  E-value=0.98  Score=46.80  Aligned_cols=38  Identities=21%  Similarity=0.217  Sum_probs=32.3

Q ss_pred             cCCCcEEEEe----ccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          295 PKTTAHVLLR----GTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       295 p~~~~~V~l~----Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      ....++|+|+    |+||  -||+.+++.|.++|.+|+.  |+.+.
T Consensus        49 ~~~~~~VLVt~~~~GatG--~iG~~lv~~L~~~G~~V~~l~R~~~~   92 (378)
T PLN00016         49 AVEKKKVLIVNTNSGGHA--FIGFYLAKELVKAGHEVTLFTRGKEP   92 (378)
T ss_pred             ccccceEEEEeccCCCce--eEhHHHHHHHHHCCCEEEEEecCCcc
Confidence            3456789999    9999  9999999999999999988  65543

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=84.42  E-value=2.7  Score=41.20  Aligned_cols=37  Identities=22%  Similarity=0.351  Sum_probs=32.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  338 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l  338 (474)
                      .++.++|+.   .+|+.+|+-|.++|..|++  +++++.++.
T Consensus         1 m~iiIiG~G---~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~   39 (225)
T COG0569           1 MKIIIIGAG---RVGRSVARELSEEGHNVVLIDRDEERVEEF   39 (225)
T ss_pred             CEEEEECCc---HHHHHHHHHHHhCCCceEEEEcCHHHHHHH
Confidence            368899988   9999999999999999999  888887763

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=84.39  E-value=1.1  Score=44.92  Aligned_cols=28  Identities=25%  Similarity=0.300  Sum_probs=26.6

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +|+|+|+||  -||+++|+.|.++|.+|++
T Consensus         2 ~vlVtGatG--~iG~~l~~~L~~~g~~V~~   29 (338)
T PRK10675          2 RVLVTGGSG--YIGSHTCVQLLQNGHDVVI   29 (338)
T ss_pred             eEEEECCCC--hHHHHHHHHHHHCCCeEEE
Confidence            589999999  9999999999999999987

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=84.31  E-value=2.8  Score=42.41  Aligned_cols=102  Identities=15%  Similarity=0.096  Sum_probs=66.1

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--Cc---eeEEE--EcCc-
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HK---TKIWL--VGDD-  369 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~---~~vwi--vg~~-  369 (474)
                      +|-++|. |  .+|+++|+.|.+.|.+|++  |++++.+.+++. ..    . . ..+.++  +.   ++++|  +-+. 
T Consensus         2 ~Ig~IGl-G--~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-g~----~-~-~~s~~~~~~~~~~advVi~~vp~~~   71 (299)
T PRK12490          2 KLGLIGL-G--KMGGNMAERLREDGHEVVGYDVNQEAVDVAGKL-GI----T-A-RHSLEELVSKLEAPRTIWVMVPAGE   71 (299)
T ss_pred             EEEEEcc-c--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-CC----e-e-cCCHHHHHHhCCCCCEEEEEecCch
Confidence            5788885 4  9999999999999999988  888888888653 11    0 1 112322  22   44543  2221 


Q ss_pred             -CCh--hhh-hcCCCCceeecccccCcc-------CC-CCCeeeecCCccccCC
Q 011973          370 -LTG--KEQ-ARAPKGTIFIPYTQIPPR-------KL-RKDCFYHSTPAMIIPP  411 (474)
Q Consensus       370 -i~~--~eq-~~a~~G~~f~~~~~v~p~-------~~-R~dc~y~~~~am~vP~  411 (474)
                       +..  ++. ..+++|.++++.|.++|.       ++ ++.+.|.+-|.+--|.
T Consensus        72 ~~~~v~~~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~vdapV~G~~~  125 (299)
T PRK12490         72 VTESVIKDLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGIHYVDCGTSGGVW  125 (299)
T ss_pred             HHHHHHHHHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCCeEEeCCCCCCHH
Confidence             111  122 235789999999988885       11 2578899988886554

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=84.10  E-value=1.8  Score=47.13  Aligned_cols=66  Identities=15%  Similarity=0.159  Sum_probs=44.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhcc-------Cc--EEEe--cchhhHHHHHhhCcccc---cccee-eeccccc-Cce
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQM-------GI--KVAT--ICKDDYEKLKLRIPVEA---QHNLV-LSTSYAA-HKT  361 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~-------~v--~v~l--~~~~~~~~l~~~~~~~~---~~~l~-~~t~~~~-~~~  361 (474)
                      .-+|.++||+|  .||+++|..|+.+       ++  ++++  +++++.+-...++....   ..++. ...+|++ +++
T Consensus       100 ~~KV~IIGAaG--~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye~~kda  177 (444)
T PLN00112        100 LINVAVSGAAG--MISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYEVFQDA  177 (444)
T ss_pred             CeEEEEECCCc--HHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHHHhCcC
Confidence            56899999998  9999999999977       66  4555  78887776555543322   01211 2225555 888


Q ss_pred             eEEE
Q 011973          362 KIWL  365 (474)
Q Consensus       362 ~vwi  365 (474)
                      +|+|
T Consensus       178 DiVV  181 (444)
T PLN00112        178 EWAL  181 (444)
T ss_pred             CEEE
Confidence            7755

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=84.08  E-value=3.6  Score=43.83  Aligned_cols=84  Identities=15%  Similarity=0.063  Sum_probs=57.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEEEcC------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD------  368 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg~------  368 (474)
                      ..++|-++|.-   .||+++|+.|..-|.+|+..+..+-     +  .+..   ....++++  +.++|+++--      
T Consensus       115 ~gktvGIIG~G---~IG~~vA~~l~a~G~~V~~~dp~~~-----~--~~~~---~~~~~L~ell~~sDiI~lh~PLt~~g  181 (378)
T PRK15438        115 HDRTVGIVGVG---NVGRRLQARLEALGIKTLLCDPPRA-----D--RGDE---GDFRSLDELVQEADILTFHTPLFKDG  181 (378)
T ss_pred             CCCEEEEECcC---HHHHHHHHHHHHCCCEEEEECCccc-----c--cccc---cccCCHHHHHhhCCEEEEeCCCCCCc
Confidence            57899999985   8999999999999999999332211     0  0110   11124443  5666655222      


Q ss_pred             ------cCChhhhhcCCCCceeecccc---cCcc
Q 011973          369 ------DLTGKEQARAPKGTIFIPYTQ---IPPR  393 (474)
Q Consensus       369 ------~i~~~eq~~a~~G~~f~~~~~---v~p~  393 (474)
                            -++.+.+..+++|+++|..+|   |+.+
T Consensus       182 ~~~T~~li~~~~l~~mk~gailIN~aRG~vVDe~  215 (378)
T PRK15438        182 PYKTLHLADEKLIRSLKPGAILINACRGAVVDNT  215 (378)
T ss_pred             ccccccccCHHHHhcCCCCcEEEECCCchhcCHH
Confidence                  356788899999999999999   5554

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=84.04  E-value=2  Score=43.32  Aligned_cols=75  Identities=20%  Similarity=0.205  Sum_probs=48.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc---hhhHHHHHhhCcccccccee-eecc---ccc---------C
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC---KDDYEKLKLRIPVEAQHNLV-LSTS---YAA---------H  359 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~---~~~~~~l~~~~~~~~~~~l~-~~t~---~~~---------~  359 (474)
                      -+.|+++|+.|  -||++.+..|.++|++++.  .+   .+...+||+..|..+-..+- .++.   .++         -
T Consensus         5 GKna~vtggag--GIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    5 GKNALVTGGAG--GIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG   82 (261)
T ss_pred             CceEEEecCCc--hhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence            36788888887  8999999999999999998  33   34445566555554422111 2221   111         5


Q ss_pred             ceeEEEEcCcCChhh
Q 011973          360 KTKIWLVGDDLTGKE  374 (474)
Q Consensus       360 ~~~vwivg~~i~~~e  374 (474)
                      ++||.|=|++|-.+.
T Consensus        83 ~iDIlINgAGi~~dk   97 (261)
T KOG4169|consen   83 TIDILINGAGILDDK   97 (261)
T ss_pred             ceEEEEcccccccch
Confidence            668888777765543

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=83.93  E-value=1.8  Score=44.96  Aligned_cols=147  Identities=14%  Similarity=0.145  Sum_probs=91.6

Q ss_pred             cceeeecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee
Q 011973          275 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL  352 (474)
Q Consensus       275 L~irvv~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~  352 (474)
                      .+-|++.+.+.   ....+++...++|=++|=-   -.|++.|.-|-+.|.+|++  |++++.+.|++.=.+      +.
T Consensus        15 ~~~~~~~~~~~---~~s~~~~~s~~~iGFIGLG---~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~------v~   82 (327)
T KOG0409|consen   15 FSRRLVKASET---AMSSRITPSKTRIGFIGLG---NMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGAR------VA   82 (327)
T ss_pred             hcccccccccc---cccccCCcccceeeEEeec---cchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchh------hh
Confidence            34566666665   5566666677788888754   6899999999999999999  999999999876211      10


Q ss_pred             ecccc-cCceeEE--EEcCcCChhhhhc--------CCCCcee-ecccccCcc-------CCC-CCeeeecCCccc-cCC
Q 011973          353 STSYA-AHKTKIW--LVGDDLTGKEQAR--------APKGTIF-IPYTQIPPR-------KLR-KDCFYHSTPAMI-IPP  411 (474)
Q Consensus       353 ~t~~~-~~~~~vw--ivg~~i~~~eq~~--------a~~G~~f-~~~~~v~p~-------~~R-~dc~y~~~~am~-vP~  411 (474)
                      -+..+ ++++|++  +|++....++..-        .++|-.. +|-|-++|.       +.+ ++|.|.+.|+-- +++
T Consensus        83 ~sPaeVae~sDvvitmv~~~~~v~~v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~~~~vDAPVSGg~~~  162 (327)
T KOG0409|consen   83 NSPAEVAEDSDVVITMVPNPKDVKDVLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKGGRFVDAPVSGGVKG  162 (327)
T ss_pred             CCHHHHHhhcCEEEEEcCChHhhHHHhcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHhCCCeEEeccccCCchh
Confidence            11112 2445443  4666666666433        2344444 888888887       223 999999999742 333


Q ss_pred             CCccccccccccCcchhHHHHH
Q 011973          412 SLSNMHSCENWLGRRVMSAWRI  433 (474)
Q Consensus       412 ~~~~~~~~e~~~prr~~~Ac~a  433 (474)
                      .=+|.=+.=-+=++....||..
T Consensus       163 A~~G~LtimagGde~~~~~~~~  184 (327)
T KOG0409|consen  163 AEEGTLTIMAGGDEALFEAASP  184 (327)
T ss_pred             hhcCeEEEEecCcHHHHHHHHH
Confidence            2222222223334445555543

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=83.92  E-value=4.3  Score=39.95  Aligned_cols=86  Identities=15%  Similarity=0.185  Sum_probs=55.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--c-c-c------c-CceeE
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S-Y-A------A-HKTKI  363 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~-~-~------~-~~~~v  363 (474)
                      ....|++.|+.|  -+|.++++.+...|.++..  ++.++.+.+++ ++.+.   ++...  + . +      . +..++
T Consensus       140 ~~~~vlI~ga~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~---~~~~~~~~~~~~~~~~~~~~~~~d~  213 (334)
T PTZ00354        140 KGQSVLIHAGAS--GVGTAAAQLAEKYGAATIITTSSEEKVDFCKK-LAAII---LIRYPDEEGFAPKVKKLTGEKGVNL  213 (334)
T ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcE---EEecCChhHHHHHHHHHhCCCCceE
Confidence            346899999998  9999999999999998766  88888888854 33321   22111  1 1 1      1 33455


Q ss_pred             EE--EcCcCChhhhhcCCCCceeeccc
Q 011973          364 WL--VGDDLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       364 wi--vg~~i~~~eq~~a~~G~~f~~~~  388 (474)
                      ++  +|.....+-.+.+++|-.|+.+.
T Consensus       214 ~i~~~~~~~~~~~~~~l~~~g~~i~~~  240 (334)
T PTZ00354        214 VLDCVGGSYLSETAEVLAVDGKWIVYG  240 (334)
T ss_pred             EEECCchHHHHHHHHHhccCCeEEEEe
Confidence            55  23233344455667777787765

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=83.61  E-value=8.9  Score=38.95  Aligned_cols=28  Identities=14%  Similarity=0.164  Sum_probs=25.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+|.++|+-   .+|+++|+.|.+.|.+|.+
T Consensus         5 m~I~iiG~G---~~G~~lA~~l~~~G~~V~~   32 (308)
T PRK14619          5 KTIAILGAG---AWGSTLAGLASANGHRVRV   32 (308)
T ss_pred             CEEEEECcc---HHHHHHHHHHHHCCCEEEE
Confidence            469999986   9999999999999999999

>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB

Probab=83.54  E-value=1.8  Score=49.54  Aligned_cols=42  Identities=12%  Similarity=0.124  Sum_probs=35.1

Q ss_pred             cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 011973          295 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  339 (474)
Q Consensus       295 p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~  339 (474)
                      |+.-++|.|+||-   -+|+.||..+++.|++|++  ++.+.+++-+
T Consensus       310 ~~~i~~v~ViGaG---~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~  353 (714)
T TIGR02437       310 AKDVKQAAVLGAG---IMGGGIAYQSASKGTPIVMKDINQHSLDLGL  353 (714)
T ss_pred             ccccceEEEECCc---hHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence            4466789999998   7999999999999999999  7777766543

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=83.35  E-value=1.7  Score=44.66  Aligned_cols=101  Identities=20%  Similarity=0.203  Sum_probs=66.8

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh-HHHHHhhCccccccceeeeccc-cc-CceeEEE--------E
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD-YEKLKLRIPVEAQHNLVLSTSY-AA-HKTKIWL--------V  366 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~-~~~l~~~~~~~~~~~l~~~t~~-~~-~~~~vwi--------v  366 (474)
                      +|.++|--   ..|...|.-|-+.|..|.+  |++++ -+.++.+ +...      ..+. ++ +.++++|        |
T Consensus         2 kIafIGLG---~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~-Ga~~------a~s~~eaa~~aDvVitmv~~~~~V   71 (286)
T COG2084           2 KIAFIGLG---IMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAA-GATV------AASPAEAAAEADVVITMLPDDAAV   71 (286)
T ss_pred             eEEEEcCc---hhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHc-CCcc------cCCHHHHHHhCCEEEEecCCHHHH
Confidence            67888865   8999999999999999999  78777 5555443 1111      1122 22 4455544        3


Q ss_pred             cCcCCh--hhhhcCCCCceeecccccCcc---CCC-----CCeeeecCCccccC
Q 011973          367 GDDLTG--KEQARAPKGTIFIPYTQIPPR---KLR-----KDCFYHSTPAMIIP  410 (474)
Q Consensus       367 g~~i~~--~eq~~a~~G~~f~~~~~v~p~---~~R-----~dc~y~~~~am~vP  410 (474)
                      .+.+..  .=...++||++|||.|-++|.   ++.     +-+.|.+-|++--+
T Consensus        72 ~~V~~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~~lDAPVsGg~  125 (286)
T COG2084          72 RAVLFGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLDAPVSGGV  125 (286)
T ss_pred             HHHHhCccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCcEEecCccCCc
Confidence            333332  123457899999999999998   221     66778888886533

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=83.31  E-value=1.2  Score=43.76  Aligned_cols=28  Identities=18%  Similarity=0.328  Sum_probs=26.3

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +|+|+|++|  .||+++++.|.++|.+|.+
T Consensus         1 kvlV~GatG--~iG~~l~~~l~~~g~~V~~   28 (328)
T TIGR01179         1 KILVTGGAG--YIGSHTVRQLLESGHEVVV   28 (328)
T ss_pred             CEEEeCCCC--HHHHHHHHHHHhCCCeEEE
Confidence            489999999  9999999999999999987

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK05442 malate dehydrogenase; Provisional

Probab=83.28  E-value=1.1  Score=46.48  Aligned_cols=26  Identities=8%  Similarity=0.204  Sum_probs=22.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGI  325 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v  325 (474)
                      -.+|.++||+|  .||+.+|..|+.+++
T Consensus         4 ~~KV~IiGaaG--~VG~~~a~~l~~~~~   29 (326)
T PRK05442          4 PVRVAVTGAAG--QIGYSLLFRIASGDM   29 (326)
T ss_pred             CcEEEEECCCc--HHHHHHHHHHHhhhh
Confidence            35899999998  999999999997666

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=83.15  E-value=2.7  Score=43.00  Aligned_cols=63  Identities=21%  Similarity=0.274  Sum_probs=41.2

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHH----HHhhCccccccceeeeccccc-CceeEEEE
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEK----LKLRIPVEAQHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~----l~~~~~~~~~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      +|.++|+ |  .||.++|..|+++|+  ++.+  +++++.+.    |....+.... ..+..+++++ ++++++|+
T Consensus         2 kI~IIGa-G--~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~-~~i~~~d~~~l~~aDiVii   73 (308)
T cd05292           2 KVAIVGA-G--FVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKP-VRIYAGDYADCKGADVVVI   73 (308)
T ss_pred             EEEEECC-C--HHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCC-eEEeeCCHHHhCCCCEEEE
Confidence            5899999 6  999999999999994  6776  67766654    4333222211 1233345555 88877664

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=83.11  E-value=1.9  Score=44.52  Aligned_cols=95  Identities=16%  Similarity=0.261  Sum_probs=61.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc------
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------  367 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg------  367 (474)
                      .++|.++|--   .||+++|+.|...|.+|..  +++++.       + +.. ......++++  +.++++++-      
T Consensus       136 g~tvgIvG~G---~IG~~vA~~l~afG~~V~~~~~~~~~~-------~-~~~-~~~~~~~l~e~l~~aDvvv~~lPlt~~  203 (312)
T PRK15469        136 DFTIGILGAG---VLGSKVAQSLQTWGFPLRCWSRSRKSW-------P-GVQ-SFAGREELSAFLSQTRVLINLLPNTPE  203 (312)
T ss_pred             CCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCCCCC-------C-Cce-eecccccHHHHHhcCCEEEECCCCCHH
Confidence            4688999976   9999999999999999988  322211       0 100 0011113332  667776632      


Q ss_pred             --CcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCeeeecC
Q 011973          368 --DDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST  404 (474)
Q Consensus       368 --~~i~~~eq~~a~~G~~f~~~~~---v~p~---------~~R---~dc~y~~~  404 (474)
                        ..+..+.+.++++|++|+.++|   |+.+         .+|   -|++..+-
T Consensus       204 T~~li~~~~l~~mk~ga~lIN~aRG~vVde~aL~~aL~~g~i~gaalDVf~~EP  257 (312)
T PRK15469        204 TVGIINQQLLEQLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFSREP  257 (312)
T ss_pred             HHHHhHHHHHhcCCCCcEEEECCCccccCHHHHHHHHhcCCeeeEEecCCCCCC
Confidence              2345567889999999999999   5544         334   47777664

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=83.10  E-value=5.7  Score=39.01  Aligned_cols=85  Identities=15%  Similarity=0.200  Sum_probs=52.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccc-----cc---CceeEEE--
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY-----AA---HKTKIWL--  365 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~-----~~---~~~~vwi--  365 (474)
                      ...|++.|++|  .+|.++++.+...|.+|.+  +++++.+.++ +++...   ++.....     +.   ..+++++  
T Consensus       147 ~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~---~~~~~~~~~~~~~~~~~~~~d~vi~~  220 (325)
T cd05280         147 DGPVLVTGATG--GVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLGASE---VLDREDLLDESKKPLLKARWAGAIDT  220 (325)
T ss_pred             CCEEEEECCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcE---EEcchhHHHHHHHHhcCCCccEEEEC
Confidence            45899999998  9999999887799999876  7888888774 444322   2321111     10   2345555  


Q ss_pred             EcCcCChhhhhcCCCCceeeccc
Q 011973          366 VGDDLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       366 vg~~i~~~eq~~a~~G~~f~~~~  388 (474)
                      +|...-.+-.+.++++-+|+.+.
T Consensus       221 ~~~~~~~~~~~~l~~~g~~v~~g  243 (325)
T cd05280         221 VGGDVLANLLKQTKYGGVVASCG  243 (325)
T ss_pred             CchHHHHHHHHhhcCCCEEEEEe
Confidence            22222233344556666677775

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]

Probab=83.08  E-value=3.6  Score=43.89  Aligned_cols=169  Identities=16%  Similarity=0.131  Sum_probs=108.8

Q ss_pred             eeecCChhHHHHHHhcCc--CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecc
Q 011973          278 KVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTS  355 (474)
Q Consensus       278 rvv~GnsltaAvvl~~ip--~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~  355 (474)
                      |-=||.|+.-+ |.+.+-  -.-+.|+|+|=-   .+|+-||..|.-.|-+|.+..-|.-..||.. ..+.   -|  .+
T Consensus       188 rYGtgqS~~Dg-I~RaTn~liaGK~vVV~GYG---~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~-MdGf---~V--~~  257 (420)
T COG0499         188 RYGTGQSLLDG-ILRATNVLLAGKNVVVAGYG---WVGRGIAMRLRGMGARVIVTEVDPIRALEAA-MDGF---RV--MT  257 (420)
T ss_pred             ccccchhHHHH-HHhhhceeecCceEEEeccc---ccchHHHHHhhcCCCeEEEEecCchHHHHHh-hcCc---EE--EE
Confidence            44455555433 233322  145677777765   9999999999999999999666666666554 3333   22  22


Q ss_pred             c-cc-CceeEEE----EcCcCChhhhhcCCCCceeecccccCcc--------------CCCCCeeeecCC---cc--ccC
Q 011973          356 Y-AA-HKTKIWL----VGDDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCFYHSTP---AM--IIP  410 (474)
Q Consensus       356 ~-~~-~~~~vwi----vg~~i~~~eq~~a~~G~~f~~~~~v~p~--------------~~R~dc~y~~~~---am--~vP  410 (474)
                      . ++ ...+|+|    .=+.|+.|+.+.|+.|++.|-.-.|+-+              +.|+.+.-.+.|   -+  .--
T Consensus       258 m~~Aa~~gDifiT~TGnkdVi~~eh~~~MkDgaIl~N~GHFd~EI~~~~L~~~~~~~~~vr~~V~ey~l~~Gkri~llae  337 (420)
T COG0499         258 MEEAAKTGDIFVTATGNKDVIRKEHFEKMKDGAILANAGHFDVEIDVAGLEELAVEKREVRPQVDEYELPDGKRIILLAE  337 (420)
T ss_pred             hHHhhhcCCEEEEccCCcCccCHHHHHhccCCeEEecccccceeccHHHHHHhhhhHhccccCceEEEcCCCCEEEEEec
Confidence            3 23 4557777    4578999999999999999977654322              233332211111   11  112


Q ss_pred             CCCccccccccccCcchhHHHHHhhhhhhhcCCCCC---ccch--hhhhHHH
Q 011973          411 PSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLN---ECGQ--TMCDIHQ  457 (474)
Q Consensus       411 ~~~~~~~~~e~~~prr~~~Ac~a~~~v~alEgw~~~---e~G~--iv~~id~  457 (474)
                      +-+-|+. |--+.|..+|+..+|--.+.+.|=|..+   |-|=  +...+|+
T Consensus       338 GRLvNLa-~a~GHPs~VMd~SFanQaLa~~~L~~n~~~~~~~Vy~lP~~lD~  388 (420)
T COG0499         338 GRLVNLA-AATGHPSEVMDMSFANQALAQIYLVKNHGKLEPGVYRLPKELDE  388 (420)
T ss_pred             ceeeeec-cCCCCcHHHhhhhHHHHHHHHHHHHhcccccCCceeeCcHHHHH
Confidence            2366687 8899999999999999998888877766   4443  2355554

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=83.05  E-value=2.6  Score=43.53  Aligned_cols=136  Identities=18%  Similarity=0.260  Sum_probs=76.9

Q ss_pred             HcCCcEEEecccc---c-cccccccCceeeecCCCCcceeeecCChh-----HHHHHHhc---CcCCCcEEEEeccCCCc
Q 011973          243 AKGVKVISLGLLN---Q-GEELNRNGEIYLERQPNKLKIKVVDGSSL-----AAAVVVNS---LPKTTAHVLLRGTVTAN  310 (474)
Q Consensus       243 k~G~kV~~LG~ln---~-~e~ln~~g~l~v~k~p~~L~irvv~Gnsl-----taAvvl~~---ip~~~~~V~l~Gatg~~  310 (474)
                      +-|=+|+.+|...   . .|-.+-... .+.+.|+  .+-....-++     ||+..+.+   ++. ..+|++.||+|  
T Consensus        80 ~~GdrV~~~~~~~~~G~~AEy~~v~a~-~~~~~P~--~ls~~eAAal~~~~~TA~~~l~~~~~l~~-g~~VLV~gaaG--  153 (326)
T COG0604          80 KVGDRVAALGGVGRDGGYAEYVVVPAD-WLVPLPD--GLSFEEAAALPLAGLTAWLALFDRAGLKP-GETVLVHGAAG--  153 (326)
T ss_pred             CCCCEEEEccCCCCCCcceeEEEecHH-HceeCCC--CCCHHHHHHHHHHHHHHHHHHHHhcCCCC-CCEEEEecCCc--
Confidence            4566777764110   0 233333333 2334466  2333334444     88888887   333 67899999998  


Q ss_pred             hhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--ccc----c----CceeEEE--EcCcCChhhhh
Q 011973          311 KVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYA----A----HKTKIWL--VGDDLTGKEQA  376 (474)
Q Consensus       311 kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~~----~----~~~~vwi--vg~~i~~~eq~  376 (474)
                      -||++..+.+...|..+..  .+.++.+ +.++++...   .+..+  ++.    +    +..++++  ||...-.+-..
T Consensus       154 gVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~---vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~  229 (326)
T COG0604         154 GVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADH---VINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLA  229 (326)
T ss_pred             hHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCE---EEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHH
Confidence            9999999999899854333  6677777 555656554   22211  121    1    3456666  55444444444


Q ss_pred             cCCCCceeeccc
Q 011973          377 RAPKGTIFIPYT  388 (474)
Q Consensus       377 ~a~~G~~f~~~~  388 (474)
                      .+.+|-.++-+-
T Consensus       230 ~l~~~G~lv~ig  241 (326)
T COG0604         230 ALAPGGRLVSIG  241 (326)
T ss_pred             HhccCCEEEEEe
Confidence            445555555444

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=82.83  E-value=3.8  Score=42.55  Aligned_cols=94  Identities=16%  Similarity=0.197  Sum_probs=61.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEcCc---
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDD---  369 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg~~---  369 (474)
                      ..++|.++|.-   .||+++|+.|...|.+|..  ++.+.....           +-...+.++  ++++++++--.   
T Consensus       145 ~g~~VgIIG~G---~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~-----------~~~~~~l~ell~~aDiVil~lP~t~  210 (330)
T PRK12480        145 KNMTVAIIGTG---RIGAATAKIYAGFGATITAYDAYPNKDLDF-----------LTYKDSVKEAIKDADIISLHVPANK  210 (330)
T ss_pred             CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEEeCChhHhhhh-----------hhccCCHHHHHhcCCEEEEeCCCcH
Confidence            34579999975   8999999999999999999  443321100           001123432  56666553333   


Q ss_pred             -----CChhhhhcCCCCceeecccc---cCcc---------CCC---CCeeeecC
Q 011973          370 -----LTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST  404 (474)
Q Consensus       370 -----i~~~eq~~a~~G~~f~~~~~---v~p~---------~~R---~dc~y~~~  404 (474)
                           +..+....+++|++++.++|   ++..         +++   -|++..+-
T Consensus       211 ~t~~li~~~~l~~mk~gavlIN~aRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP  265 (330)
T PRK12480        211 ESYHLFDKAMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTYENEA  265 (330)
T ss_pred             HHHHHHhHHHHhcCCCCcEEEEcCCccccCHHHHHHHHHcCCeeEEEEeccCCCC
Confidence                 34467778999999999999   5544         222   47777664

>PLN02858 fructose-bisphosphate aldolase

Probab=82.74  E-value=2.2  Score=52.37  Aligned_cols=178  Identities=12%  Similarity=0.088  Sum_probs=101.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHcCCcEEEeccccc-ccc-cc-ccCceee---ecC-CCCcceeeecCChhHHHH---HHhc
Q 011973          224 PWRREAINSLIEEAILEADAKGVKVISLGLLNQ-GEE-LN-RNGEIYL---ERQ-PNKLKIKVVDGSSLAAAV---VVNS  293 (474)
Q Consensus       224 ~~~~~~in~~Ie~Ai~~A~k~G~kV~~LG~ln~-~e~-ln-~~g~l~v---~k~-p~~L~irvv~GnsltaAv---vl~~  293 (474)
                      .+..+-+.|-+.-|...|++.|+..-...+..+ .++ .+ |.|+.-.   .|. .+.-.+++.+-|+---+.   -.++
T Consensus       237 ~F~l~l~~KDl~la~~~A~~~g~~lpl~~~a~~~~~~a~~~G~g~~D~sav~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  316 (1378)
T PLN02858        237 GRFLNVLVQNLGIVLDMAKSLPFPLPLLAVAHQQLISGSSSMQGDDTATSLAKVWEKVFGVNILEAANRELYKPEDLAKQ  316 (1378)
T ss_pred             CchhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHcCCCccccccccccChHHHHHH
Confidence            345566777788899999999998765444444 111 11 1111000   000 000001222222110000   0001


Q ss_pred             C---cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE-
Q 011973          294 L---PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL-  365 (474)
Q Consensus       294 i---p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi-  365 (474)
                      +   +|..++|-++|--   .+|+++|+.|.+.|.+|..  |+.++.+.++++-.      .. ..+.. . ++++++| 
T Consensus       317 ~~~~~~~~~~IGfIGlG---~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga------~~-~~s~~e~~~~aDvVi~  386 (1378)
T PLN02858        317 ITMQAKPVKRIGFIGLG---AMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGG------LA-GNSPAEVAKDVDVLVI  386 (1378)
T ss_pred             hhccccCCCeEEEECch---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC------ee-cCCHHHHHhcCCEEEE
Confidence            0   3445789999854   9999999999999999988  88888888876510      01 12332 2 5565544 


Q ss_pred             -Ec------CcCC-hh-hhhcCCCCceeecccccCccCC----------CCCeeeecCCccccCC
Q 011973          366 -VG------DDLT-GK-EQARAPKGTIFIPYTQIPPRKL----------RKDCFYHSTPAMIIPP  411 (474)
Q Consensus       366 -vg------~~i~-~~-eq~~a~~G~~f~~~~~v~p~~~----------R~dc~y~~~~am~vP~  411 (474)
                       |.      +.+. +. -...+++|.++++.|-++|...          +++..|.+.|.+--|.
T Consensus       387 ~V~~~~~v~~Vl~g~~g~~~~l~~g~ivVd~STvsP~~~~~la~~l~~~g~g~~~lDAPVsGg~~  451 (1378)
T PLN02858        387 MVANEVQAENVLFGDLGAVSALPAGASIVLSSTVSPGFVIQLERRLENEGRDIKLVDAPVSGGVK  451 (1378)
T ss_pred             ecCChHHHHHHHhchhhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHhhCCCcEEEEccCCCChh
Confidence             32      1121 11 1234589999999999888722          1688899999876655

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=82.51  E-value=3.7  Score=40.36  Aligned_cols=42  Identities=19%  Similarity=0.168  Sum_probs=35.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      ....|++.|++|  .+|.++++.+...|.++..  ++.++.+.+++
T Consensus       162 ~~~~vlI~ga~g--~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~  205 (332)
T cd08259         162 KGDTVLVTGAGG--GVGIHAIQLAKALGARVIAVTRSPEKLKILKE  205 (332)
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence            356899999998  9999999999999999877  77777777744

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=82.43  E-value=1.7  Score=44.62  Aligned_cols=28  Identities=21%  Similarity=0.270  Sum_probs=25.1

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcE--EEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIK--VAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~--v~l  329 (474)
                      +|.++||||  .||+++|..|+..|..  |.+
T Consensus         2 kI~IiGatG--~vG~~~a~~l~~~g~~~~v~l   31 (309)
T cd05294           2 KVSIIGASG--RVGSATALLLAKEDVVKEINL   31 (309)
T ss_pred             EEEEECCCC--hHHHHHHHHHHhCCCCCEEEE
Confidence            689999999  9999999999988876  666

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=82.31  E-value=3.5  Score=43.65  Aligned_cols=29  Identities=31%  Similarity=0.286  Sum_probs=26.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.|+++|+.   ++|.++|+.|.++|.+|++
T Consensus         5 ~k~v~iiG~g---~~G~~~A~~l~~~G~~V~~   33 (450)
T PRK14106          5 GKKVLVVGAG---VSGLALAKFLKKLGAKVIL   33 (450)
T ss_pred             CCEEEEECCC---HHHHHHHHHHHHCCCEEEE
Confidence            4789999977   7999999999999999999

>PLN02206 UDP-glucuronate decarboxylase

Probab=82.26  E-value=1.6  Score=47.01  Aligned_cols=31  Identities=19%  Similarity=0.209  Sum_probs=28.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +..+|+|+|+||  -||+.+++.|.++|.+|..
T Consensus       118 ~~~kILVTGatG--fIGs~Lv~~Ll~~G~~V~~  148 (442)
T PLN02206        118 KGLRVVVTGGAG--FVGSHLVDRLMARGDSVIV  148 (442)
T ss_pred             CCCEEEEECccc--HHHHHHHHHHHHCcCEEEE
Confidence            346899999999  9999999999999999987

>PRK04284 ornithine carbamoyltransferase; Provisional

Probab=82.25  E-value=17  Score=37.97  Aligned_cols=164  Identities=19%  Similarity=0.228  Sum_probs=97.2

Q ss_pred             HHHcCCcEEEeccc----ccccc-------ccccCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 011973          241 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  291 (474)
Q Consensus       241 A~k~G~kV~~LG~l----n~~e~-------ln~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvvl  291 (474)
                      +.++|.+++.|+.=    .++|.       |....-+.+.|+|+         ..+++|+.|.+         +=+.++.
T Consensus        67 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y~D~iviR~~~~~~~~~~a~~s~vPVINa~~~~~HPtQaL~Dl~Ti~  146 (332)
T PRK04284         67 AYDQGAHVTYLGPTGSQMGKKESTKDTARVLGGMYDGIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVLADFLTAK  146 (332)
T ss_pred             HHHcCCeEEEcCCccccCCCCcCHHHHHHHHHHhCCEEEEecCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence            45699999999653    34555       35566677888877         35688888654         1245666


Q ss_pred             hcC-c-CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhH-------HHHHhhCccccccceeeecccc-c-Cc
Q 011973          292 NSL-P-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-------EKLKLRIPVEAQHNLVLSTSYA-A-HK  360 (474)
Q Consensus       292 ~~i-p-~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~-------~~l~~~~~~~~~~~l~~~t~~~-~-~~  360 (474)
                      +.+ . -+..+|+++|... +.+++..+..|++-|.++.+-.++.|       ++.+ +...+.+..+...++.+ + ++
T Consensus       147 e~~~g~l~g~kia~vGD~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~-~~~~~~g~~~~~~~d~~ea~~~  224 (332)
T PRK04284        147 EHLKKPYKDIKFTYVGDGR-NNVANALMQGAAIMGMDFHLVCPKELNPDDELLNKCK-EIAAETGGKITITDDIDEGVKG  224 (332)
T ss_pred             HHhcCCcCCcEEEEecCCC-cchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHH-HHHHHcCCeEEEEcCHHHHhCC
Confidence            653 2 2457999999862 36899999999999999999333322       2222 11223333322223444 4 88


Q ss_pred             eeEEEEcCcCChhhhhc--CCCCceeecccccCcc---CCC-CCee-eecCCcc
Q 011973          361 TKIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR---KLR-KDCF-YHSTPAM  407 (474)
Q Consensus       361 ~~vwivg~~i~~~eq~~--a~~G~~f~~~~~v~p~---~~R-~dc~-y~~~~am  407 (474)
                      ++|+..+.|.+..+...  ...-..|-+| |++++   ..+ +|+. .|.+|+.
T Consensus       225 aDvvy~~~w~~~~~~~~~~~~~~~~~~~y-~v~~e~l~~a~~~~~ivmHplP~~  277 (332)
T PRK04284        225 SDVIYTDVWVSMGEPDEVWEERIKLLKPY-QVNKEMMKKTGNPNAIFEHCLPSF  277 (332)
T ss_pred             CCEEEECCcccCccchhhHHHHHHhccCC-cCCHHHHhhcCCCCcEEECCCCCC
Confidence            88877765543221000  0000223445 38877   345 4776 5788864

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=82.23  E-value=1.3  Score=44.80  Aligned_cols=29  Identities=10%  Similarity=0.184  Sum_probs=25.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ++|+|+|+||  -||+++++.|+++|.+++.
T Consensus         2 ~~vlVtGatG--fIG~~l~~~L~~~g~~~v~   30 (355)
T PRK10217          2 RKILITGGAG--FIGSALVRYIINETSDAVV   30 (355)
T ss_pred             cEEEEEcCCc--HHHHHHHHHHHHcCCCEEE
Confidence            5799999999  9999999999999977543

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=82.03  E-value=1.2  Score=46.10  Aligned_cols=25  Identities=8%  Similarity=0.199  Sum_probs=22.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI  325 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v  325 (474)
                      .+|.++||+|  .||+.+|..|+.+|+
T Consensus         3 ~KV~IiGa~G--~VG~~~a~~l~~~~~   27 (322)
T cd01338           3 VRVAVTGAAG--QIGYSLLFRIASGEM   27 (322)
T ss_pred             eEEEEECCCc--HHHHHHHHHHHhccc
Confidence            4799999998  999999999997777

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=82.00  E-value=2  Score=43.68  Aligned_cols=36  Identities=14%  Similarity=0.194  Sum_probs=29.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhcc-CcEEEe--cchhhHH
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYE  336 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l--~~~~~~~  336 (474)
                      .+|+|+|+||  =||+.+|+.|.++ |.+|..  |+.++..
T Consensus         2 ~~ilVtGatG--fiGs~l~~~L~~~~~~~V~~~~r~~~~~~   40 (347)
T PRK11908          2 KKVLILGVNG--FIGHHLSKRILETTDWEVYGMDMQTDRLG   40 (347)
T ss_pred             cEEEEECCCc--HHHHHHHHHHHhCCCCeEEEEeCcHHHHH
Confidence            3699999999  9999999999865 688886  5555443

>cd08293 PTGR2 Prostaglandin reductase

Probab=82.00  E-value=4.2  Score=40.75  Aligned_cols=85  Identities=12%  Similarity=0.195  Sum_probs=56.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeec--ccc-c------CceeEEE-
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYA-A------HKTKIWL-  365 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~~-~------~~~~vwi-  365 (474)
                      ..|++.|++|  -||.++++.+...|. +|..  +++++.+.++++++...   ++...  +.. .      ...++++ 
T Consensus       156 ~~VlI~ga~g--~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~---vi~~~~~~~~~~i~~~~~~gvd~vid  230 (345)
T cd08293         156 QTMVVSGAAG--ACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDA---AINYKTDNVAERLRELCPEGVDVYFD  230 (345)
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcE---EEECCCCCHHHHHHHHCCCCceEEEE
Confidence            7899999998  999999998888898 6766  78888888888765533   33222  111 1      2356666 


Q ss_pred             -EcCcCChhhhhcCCCCceeeccc
Q 011973          366 -VGDDLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       366 -vg~~i~~~eq~~a~~G~~f~~~~  388 (474)
                       +|.....+-...+.+|-+++.+.
T Consensus       231 ~~g~~~~~~~~~~l~~~G~iv~~G  254 (345)
T cd08293         231 NVGGEISDTVISQMNENSHIILCG  254 (345)
T ss_pred             CCCcHHHHHHHHHhccCCEEEEEe
Confidence             33322344445567777777765

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=81.99  E-value=4.1  Score=39.68  Aligned_cols=98  Identities=16%  Similarity=0.121  Sum_probs=60.2

Q ss_pred             hHHHHHHhcCc--CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-cc-cc
Q 011973          285 LAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SY-AA  358 (474)
Q Consensus       285 ltaAvvl~~ip--~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t-~~-~~  358 (474)
                      +||+..+..+-  +....|++.|+.|  .+|.++++.+..+|.+|..  +++++.+.++ +++...   ++..+ +. +.
T Consensus       128 ~ta~~~l~~~~~~~~g~~vlV~ga~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~---~~~~~~~~~~~  201 (320)
T cd08243         128 YTAWGSLFRSLGLQPGDTLLIRGGTS--SVGLAALKLAKALGATVTATTRSPERAALLK-ELGADE---VVIDDGAIAEQ  201 (320)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcE---EEecCccHHHH
Confidence            45555555442  2357999999988  9999999999999999877  6777777774 333322   22111 11 11


Q ss_pred             -----CceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 011973          359 -----HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       359 -----~~~~vwi--vg~~i~~~eq~~a~~G~~f~~~~  388 (474)
                           +..++++  +|.....+-.+.++++-+|+.+.
T Consensus       202 i~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g  238 (320)
T cd08243         202 LRAAPGGFDKVLELVGTATLKDSLRHLRPGGIVCMTG  238 (320)
T ss_pred             HHHhCCCceEEEECCChHHHHHHHHHhccCCEEEEEc
Confidence                 2345555  33333344445666777777766

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=81.99  E-value=5.6  Score=38.40  Aligned_cols=42  Identities=17%  Similarity=0.189  Sum_probs=35.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      ....|++.|++|  .+|.++++.+...|.+|..  ++.++.+.+++
T Consensus       139 ~~~~vli~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~  182 (323)
T cd08241         139 PGETVLVLGAAG--GVGLAAVQLAKALGARVIAAASSEEKLALARA  182 (323)
T ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHH
Confidence            356899999987  9999999999999999887  67777777754

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK06223 malate dehydrogenase; Reviewed

Probab=81.85  E-value=3.4  Score=41.79  Aligned_cols=65  Identities=18%  Similarity=0.261  Sum_probs=40.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhh----Cccccccceeeec-cccc-CceeEEEE
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLR----IPVEAQHNLVLST-SYAA-HKTKIWLV  366 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~----~~~~~~~~l~~~t-~~~~-~~~~vwiv  366 (474)
                      .+|.++|+ |  .+|+++|..|++.|. .|.+  +++++.+....+    .........+..+ ++++ ++++++|+
T Consensus         3 ~KI~VIGa-G--~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~~~~~aDiVii   76 (307)
T PRK06223          3 KKISIIGA-G--NVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYEDIAGSDVVVI   76 (307)
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHHHHCCCCEEEE
Confidence            47999999 7  999999999998876 7777  666655433222    1111111123333 5555 88877663

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=81.79  E-value=3  Score=35.44  Aligned_cols=39  Identities=23%  Similarity=0.285  Sum_probs=32.7

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      |+++|..   .+|+.+++.|.+.+.+|++  +++++.++++++-
T Consensus         1 vvI~G~g---~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~   41 (116)
T PF02254_consen    1 VVIIGYG---RIGREIAEQLKEGGIDVVVIDRDPERVEELREEG   41 (116)
T ss_dssp             EEEES-S---HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT
T ss_pred             eEEEcCC---HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc
Confidence            6789987   8999999999998878888  8888888887763

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PLN02240 UDP-glucose 4-epimerase

Probab=81.67  E-value=1.7  Score=43.82  Aligned_cols=29  Identities=21%  Similarity=0.288  Sum_probs=27.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ++|+|+|+||  -||+++++.|.++|.+|+.
T Consensus         6 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~   34 (352)
T PLN02240          6 RTILVTGGAG--YIGSHTVLQLLLAGYKVVV   34 (352)
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEE
Confidence            5799999999  9999999999999999987

>PRK11891 aspartate carbamoyltransferase; Provisional

Probab=81.56  E-value=7.7  Score=42.10  Aligned_cols=162  Identities=17%  Similarity=0.237  Sum_probs=96.0

Q ss_pred             HHHcCCcEEEecc-----cccccc-------ccccCceeeecCCC---------CcceeeecCCh----------hHHHH
Q 011973          241 ADAKGVKVISLGL-----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS----------LAAAV  289 (474)
Q Consensus       241 A~k~G~kV~~LG~-----ln~~e~-------ln~~g~l~v~k~p~---------~L~irvv~Gns----------ltaAv  289 (474)
                      +.++|..++.|+.     +.++|.       |..+.-+.+.|+|.         ..+|+|+.+-+          +=..+
T Consensus       148 ~~~LGg~~i~l~~~~~ss~~kGESi~DTarvLs~y~D~IviR~~~~~~~~e~A~~s~vPVINAgdg~~~HPtQaLaDl~T  227 (429)
T PRK11891        148 FCRLGGSVCDTTGFTFSSMAKGESIYDTSRVMSGYVDALVIRHPEQGSVAEFARATNLPVINGGDGPGEHPSQALLDLYT  227 (429)
T ss_pred             HHHcCCeEEEeCCccccCCCCCCCHHHHHHHHHHhCCEEEEeCCchhHHHHHHHhCCCCEEECCCCCCCCcHHHHHHHHH
Confidence            3489999999954     334554       45667778888876         45789998643          22456


Q ss_pred             HHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhcc-CcEEEecchhhHH---HHHhhCccccccceeeec-ccc-c
Q 011973          290 VVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYA-A  358 (474)
Q Consensus       290 vl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l~~~~~~~---~l~~~~~~~~~~~l~~~t-~~~-~  358 (474)
                      +.+...     .+..+|+++|...-+.+++..+..|++. |.++.+-..+.|+   .+.+++. +.+.. +..+ +.+ +
T Consensus       228 i~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~~G~~v~l~~P~~~~~~~~~~~~~~-~~G~~-v~~~~d~~ea  305 (429)
T PRK11891        228 IQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPTLEMPAYIVEQIS-RNGHV-IEQTDDLAAG  305 (429)
T ss_pred             HHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHhcCCEEEEECCCccccCHHHHHHHH-hcCCe-EEEEcCHHHH
Confidence            666542     2357999999872128889999998975 9999883333332   2222221 12333 3233 443 4


Q ss_pred             -CceeEEEEcCcCChhhhhcCCCCceeecccccCcc---C-CCCCee-eecCCc
Q 011973          359 -HKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPR---K-LRKDCF-YHSTPA  406 (474)
Q Consensus       359 -~~~~vwivg~~i~~~eq~~a~~G~~f~~~~~v~p~---~-~R~dc~-y~~~~a  406 (474)
                       ++++|+...- +..|+......-..|-+| |++.+   . .++||. .|.+|+
T Consensus       306 v~~ADVVYt~~-~q~er~~~~~~~~~~~~y-~vt~ell~~~ak~dai~MHcLPr  357 (429)
T PRK11891        306 LRGADVVYATR-IQKERFADESFEGYTPDF-QINQALVDAVCKPDTLIMHPLPR  357 (429)
T ss_pred             hCCCCEEEEcC-chhhcccCHHHHHhccCC-cCCHHHHhCccCCCcEEECCCCC
Confidence             8888888744 332222100001123345 38887   3 467876 567885

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=81.55  E-value=5.5  Score=44.06  Aligned_cols=137  Identities=15%  Similarity=0.173  Sum_probs=83.5

Q ss_pred             HHHcCCcEEEecccc------------ccccccccCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEeccCC
Q 011973          241 ADAKGVKVISLGLLN------------QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT  308 (474)
Q Consensus       241 A~k~G~kV~~LG~ln------------~~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~~ip~~~~~V~l~Gatg  308 (474)
                      ..++|+.++++=.+.            ++-++.|+..+...-|   +--|+.+|..-++-      ....++|+|.|+- 
T Consensus       105 l~~~~it~ia~e~vpr~sraq~~d~lssma~IAGy~Av~~aa~---~~~~~~~g~~taaG------~~pg~kVlViGaG-  174 (509)
T PRK09424        105 LAARGVTVLAMDAVPRISRAQSLDALSSMANIAGYRAVIEAAH---EFGRFFTGQITAAG------KVPPAKVLVIGAG-  174 (509)
T ss_pred             HHHcCCEEEEeecccccccCCCcccccchhhhhHHHHHHHHHH---HhcccCCCceeccC------CcCCCEEEEECCc-
Confidence            456788888865544            3444444433333322   22233333322221      2237899999998 


Q ss_pred             CchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc-ccc-----------eeeec-cc--------cc--CceeE
Q 011973          309 ANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA-QHN-----------LVLST-SY--------AA--HKTKI  363 (474)
Q Consensus       309 ~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~-~~~-----------l~~~t-~~--------~~--~~~~v  363 (474)
                        -||...+..+...|-+|..  ++.+|++..++ ++.+. ..+           ....+ .+        .+  +.+|+
T Consensus       175 --~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDV  251 (509)
T PRK09424        175 --VAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDI  251 (509)
T ss_pred             --HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHHHHHHhccCCCCE
Confidence              7999999999999998877  78888886665 44331 000           00011 11        10  34788


Q ss_pred             EEEcCc---------CChhhhhcCCCCceeecccccC
Q 011973          364 WLVGDD---------LTGKEQARAPKGTIFIPYTQIP  391 (474)
Q Consensus       364 wivg~~---------i~~~eq~~a~~G~~f~~~~~v~  391 (474)
                      +|-...         ++++..+.+++|.++++++ ++
T Consensus       252 VIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg-~~  287 (509)
T PRK09424        252 IITTALIPGKPAPKLITAEMVASMKPGSVIVDLA-AE  287 (509)
T ss_pred             EEECCCCCcccCcchHHHHHHHhcCCCCEEEEEc-cC
Confidence            883333         3788999999999999999 65

>PLN02996 fatty acyl-CoA reductase

Probab=81.34  E-value=2  Score=46.90  Aligned_cols=25  Identities=12%  Similarity=0.272  Sum_probs=22.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQM  323 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~  323 (474)
                      +.+.|+|+|+||  -||++++..|.+.
T Consensus        10 ~~k~VlvTGaTG--FlG~~ll~~LL~~   34 (491)
T PLN02996         10 ENKTILVTGATG--FLAKIFVEKILRV   34 (491)
T ss_pred             CCCeEEEeCCCc--HHHHHHHHHHHhh
Confidence            456899999999  9999999998864

>PLN02572 UDP-sulfoquinovose synthase

Probab=81.24  E-value=1.6  Score=46.73  Aligned_cols=30  Identities=27%  Similarity=0.234  Sum_probs=28.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .++|+|+|++|  =||+.+|+.|.++|.+|.+
T Consensus        47 ~k~VLVTGatG--fIGs~Lv~~L~~~G~~V~~   76 (442)
T PLN02572         47 KKKVMVIGGDG--YCGWATALHLSKRGYEVAI   76 (442)
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCeEEE
Confidence            56799999999  9999999999999999987

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=81.21  E-value=2.7  Score=41.62  Aligned_cols=45  Identities=18%  Similarity=0.186  Sum_probs=36.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+-++++|+..  -||+|||..|++.|.+|.+  ++.+.-+.-...++.
T Consensus        14 sk~~~vtGg~s--GIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g   60 (256)
T KOG1200|consen   14 SKVAAVTGGSS--GIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG   60 (256)
T ss_pred             cceeEEecCCc--hHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC
Confidence            45667888875  8999999999999999999  666667777777666

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=81.13  E-value=1.9  Score=46.24  Aligned_cols=31  Identities=16%  Similarity=0.220  Sum_probs=28.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ...+|+|+|+||  -||+.+++.|.++|.+|..
T Consensus       119 ~~mkILVTGatG--FIGs~Lv~~Ll~~G~~V~~  149 (436)
T PLN02166        119 KRLRIVVTGGAG--FVGSHLVDKLIGRGDEVIV  149 (436)
T ss_pred             CCCEEEEECCcc--HHHHHHHHHHHHCCCEEEE
Confidence            456899999999  9999999999999999987

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=81.10  E-value=4.4  Score=40.05  Aligned_cols=88  Identities=15%  Similarity=0.176  Sum_probs=55.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--cc-cc------CceeEEE-
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SY-AA------HKTKIWL-  365 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~-~~------~~~~vwi-  365 (474)
                      ...|++.|++|  .+|.++++.+.+.|.+++.  ++.++.+.+++.++...   ++...  ++ +.      ...++++ 
T Consensus       146 ~~~vlI~g~~g--~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~v~~~~~~~~d~vi~  220 (329)
T cd05288         146 GETVVVSAAAG--AVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDA---AINYKTPDLAEALKEAAPDGIDVYFD  220 (329)
T ss_pred             CCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCce---EEecCChhHHHHHHHhccCCceEEEE
Confidence            47899999988  9999999999999999877  77788888776444322   22111  11 11      2345555 


Q ss_pred             -EcCcCChhhhhcCCCCceeeccccc
Q 011973          366 -VGDDLTGKEQARAPKGTIFIPYTQI  390 (474)
Q Consensus       366 -vg~~i~~~eq~~a~~G~~f~~~~~v  390 (474)
                       +|...-.+-...++++-+|+.+...
T Consensus       221 ~~g~~~~~~~~~~l~~~G~~v~~g~~  246 (329)
T cd05288         221 NVGGEILDAALTLLNKGGRIALCGAI  246 (329)
T ss_pred             cchHHHHHHHHHhcCCCceEEEEeec
Confidence             3332222334456677778877643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=80.95  E-value=5.5  Score=40.13  Aligned_cols=84  Identities=7%  Similarity=0.164  Sum_probs=52.5

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc----EEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE-----
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI----KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL-----  365 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v----~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi-----  365 (474)
                      .+|.++|. |  .+|.++++.|.+.|.    ++..  |++++++.++++.+-    . . .++.++  ++++++|     
T Consensus         3 ~~IgfIG~-G--~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~----~-~-~~~~~e~~~~aDiIiLavkP   73 (272)
T PRK12491          3 KQIGFIGC-G--NMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGI----T-I-TTNNNEVANSADILILSIKP   73 (272)
T ss_pred             CeEEEECc-c--HHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCc----E-E-eCCcHHHHhhCCEEEEEeCh
Confidence            46899995 5  999999999998774    5666  778888888765431    1 1 123322  5666655     


Q ss_pred             --EcCcCChhhhh-cCCCCceeecccc-cCcc
Q 011973          366 --VGDDLTGKEQA-RAPKGTIFIPYTQ-IPPR  393 (474)
Q Consensus       366 --vg~~i~~~eq~-~a~~G~~f~~~~~-v~p~  393 (474)
                        +.+.+  ++.. ..+++++++++.- ++-+
T Consensus        74 ~~~~~vl--~~l~~~~~~~~lvISi~AGi~i~  103 (272)
T PRK12491         74 DLYSSVI--NQIKDQIKNDVIVVTIAAGKSIK  103 (272)
T ss_pred             HHHHHHH--HHHHHhhcCCcEEEEeCCCCcHH
Confidence              22222  1221 1457788888875 5444

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=80.81  E-value=2.3  Score=42.73  Aligned_cols=39  Identities=10%  Similarity=0.175  Sum_probs=33.8

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      ++|.++|+.   .+|+++|..|++.|.+|++  ++++++++.++
T Consensus         4 ~~I~ViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~   44 (291)
T PRK06035          4 KVIGVVGSG---VMGQGIAQVFARTGYDVTIVDVSEEILKNAME   44 (291)
T ss_pred             cEEEEECcc---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence            579999996   8999999999999999999  78888776544

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=80.79  E-value=1.5  Score=43.44  Aligned_cols=27  Identities=15%  Similarity=0.306  Sum_probs=24.0

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      |+|+||+|  =||+.+|+.|.++|.++..
T Consensus         2 ilVtGa~G--fiG~~l~~~L~~~g~~~v~   28 (308)
T PRK11150          2 IIVTGGAG--FIGSNIVKALNDKGITDIL   28 (308)
T ss_pred             EEEecCCc--HHHHHHHHHHHhCCCceEE
Confidence            79999999  9999999999999985443

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=80.74  E-value=2  Score=40.64  Aligned_cols=28  Identities=18%  Similarity=0.303  Sum_probs=24.4

Q ss_pred             EEEEeccCCCchhHHHHHHHHhcc--CcEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQM--GIKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~--~v~v~l  329 (474)
                      +|+++|++|  -||+++|+.|+++  ++.+.+
T Consensus         2 ~vlItGas~--gIG~~ia~~l~~~~~~~~v~~   31 (235)
T PRK09009          2 NILIVGGSG--GIGKAMVKQLLERYPDATVHA   31 (235)
T ss_pred             EEEEECCCC--hHHHHHHHHHHHhCCCCEEEE
Confidence            689999998  9999999999987  466665

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=80.69  E-value=8.9  Score=40.98  Aligned_cols=90  Identities=14%  Similarity=0.093  Sum_probs=59.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc-------------ccceeeecccccCceeE
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA-------------QHNLVLSTSYAAHKTKI  363 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~-------------~~~l~~~t~~~~~~~~v  363 (474)
                      .+|.++|..   -+|...|..|++.|.+|+.  +++++.+.++.......             ...+...+..  +++++
T Consensus         4 ~kI~VIGlG---~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~--~~aDv   78 (415)
T PRK11064          4 ETISVIGLG---YIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTP--EPADA   78 (415)
T ss_pred             cEEEEECcc---hhhHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeeccc--ccCCE
Confidence            579999975   8999999999999999998  88999998875522110             1111111111  24444


Q ss_pred             --EEEcCcCCh-------------hh-hhcCCCCceeecccccCcc
Q 011973          364 --WLVGDDLTG-------------KE-QARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       364 --wivg~~i~~-------------~e-q~~a~~G~~f~~~~~v~p~  393 (474)
                        ..|+...++             ++ ...+++|++++.-|-+||.
T Consensus        79 vii~vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pg  124 (415)
T PRK11064         79 FLIAVPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSPVG  124 (415)
T ss_pred             EEEEcCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence              346654211             11 2236899999999988886

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=80.56  E-value=4.2  Score=41.81  Aligned_cols=84  Identities=17%  Similarity=0.151  Sum_probs=58.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEEE--------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv--------  366 (474)
                      ..++|-++|--   .||+++|+.|.--|-+|+-.++..  .  .+   +.  . +...++++  +.+|++++        
T Consensus       144 ~gktvGIiG~G---~IG~~vA~~~~~fgm~V~~~d~~~--~--~~---~~--~-~~~~~l~ell~~sDvv~lh~Plt~~T  210 (311)
T PRK08410        144 KGKKWGIIGLG---TIGKRVAKIAQAFGAKVVYYSTSG--K--NK---NE--E-YERVSLEELLKTSDIISIHAPLNEKT  210 (311)
T ss_pred             CCCEEEEECCC---HHHHHHHHHHhhcCCEEEEECCCc--c--cc---cc--C-ceeecHHHHhhcCCEEEEeCCCCchh
Confidence            46789999974   899999999999999998833210  0  00   00  0 11224543  66666552        


Q ss_pred             cCcCChhhhhcCCCCceeecccc---cCcc
Q 011973          367 GDDLTGKEQARAPKGTIFIPYTQ---IPPR  393 (474)
Q Consensus       367 g~~i~~~eq~~a~~G~~f~~~~~---v~p~  393 (474)
                      -..|+.++..+||||++||-++|   |+.+
T Consensus       211 ~~li~~~~~~~Mk~~a~lIN~aRG~vVDe~  240 (311)
T PRK08410        211 KNLIAYKELKLLKDGAILINVGRGGIVNEK  240 (311)
T ss_pred             hcccCHHHHHhCCCCeEEEECCCccccCHH
Confidence            24578889999999999999999   6665

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=80.52  E-value=1.7  Score=42.33  Aligned_cols=28  Identities=18%  Similarity=0.348  Sum_probs=26.1

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +|+|+|+||  -||+++++.|.++|.+|..
T Consensus         1 kilv~G~tG--~iG~~l~~~l~~~g~~v~~   28 (287)
T TIGR01214         1 RILITGANG--QLGRELVQQLSPEGRVVVA   28 (287)
T ss_pred             CEEEEcCCC--HHHHHHHHHHHhcCCEEEE
Confidence            489999999  9999999999999999887

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02602 lactate dehydrogenase

Probab=80.38  E-value=1.6  Score=45.97  Aligned_cols=64  Identities=22%  Similarity=0.348  Sum_probs=41.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcccc----ccceeee-ccccc-CceeEEEE
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA----QHNLVLS-TSYAA-HKTKIWLV  366 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~~----~~~l~~~-t~~~~-~~~~vwiv  366 (474)
                      .+|.++|+ |  .||+++|..|+.+++  .+.|  .++++.+-...++..-.    ... +.. ++|+. ++++|+|+
T Consensus        38 ~KI~IIGa-G--~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~~dy~~~~daDiVVi  111 (350)
T PLN02602         38 TKVSVVGV-G--NVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILASTDYAVTAGSDLCIV  111 (350)
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeCCCHHHhCCCCEEEE
Confidence            69999997 7  999999999996676  3444  56665554444432211    112 323 25555 88888775

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=80.37  E-value=2.3  Score=45.78  Aligned_cols=62  Identities=27%  Similarity=0.289  Sum_probs=46.5

Q ss_pred             eeeecCChhHHHHHH-hcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          277 IKVVDGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       277 irvv~GnsltaAvvl-~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      ++.++|.+--+++=. +.-..+...|+|+||||  ++|+=+.+.|-++|..|..  |++++-+++-.
T Consensus        57 ~~~~~~~~~e~~v~~~~~~~~~~~~VlVvGatG--~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~  121 (411)
T KOG1203|consen   57 ISPVTGTTSEAEVSPPNNNSKKPTTVLVVGATG--KVGRRIVKILLKRGFSVRALVRDEQKAEDLLG  121 (411)
T ss_pred             CCccccccceeeeccCCCCCCCCCeEEEecCCC--chhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence            566666665554432 22233677999999999  9999999999999988887  88887776655

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=80.12  E-value=4.5  Score=42.49  Aligned_cols=30  Identities=23%  Similarity=0.320  Sum_probs=28.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ...|+|+|+.|  =||+.++..|-++|..|++
T Consensus         2 ~~~VLVtGgaG--yiGsht~l~L~~~gy~v~~   31 (343)
T KOG1371|consen    2 GKHVLVTGGAG--YIGSHTVLALLKRGYGVVI   31 (343)
T ss_pred             CcEEEEecCCc--ceehHHHHHHHhCCCcEEE
Confidence            36899999999  9999999999999999999

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=80.06  E-value=8.6  Score=37.28  Aligned_cols=86  Identities=15%  Similarity=0.203  Sum_probs=55.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--cc-c---c----CceeEEE
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SY-A---A----HKTKIWL  365 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~-~---~----~~~~vwi  365 (474)
                      .+.|++.|++|  .+|.++++.+..+|.++..  ++.++.+.+++ .+..   .++...  +. +   .    ..+++++
T Consensus       145 ~~~vli~g~~~--~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~vi  218 (328)
T cd08268         145 GDSVLITAASS--SVGLAAIQIANAAGATVIATTRTSEKRDALLA-LGAA---HVIVTDEEDLVAEVLRITGGKGVDVVF  218 (328)
T ss_pred             CCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCC---EEEecCCccHHHHHHHHhCCCCceEEE
Confidence            46899999987  9999999999999999888  77778777743 3321   122111  11 0   1    2456666


Q ss_pred             --EcCcCChhhhhcCCCCceeecccc
Q 011973          366 --VGDDLTGKEQARAPKGTIFIPYTQ  389 (474)
Q Consensus       366 --vg~~i~~~eq~~a~~G~~f~~~~~  389 (474)
                        +|.....+-...++++-.|+.+++
T Consensus       219 ~~~~~~~~~~~~~~l~~~g~~v~~g~  244 (328)
T cd08268         219 DPVGGPQFAKLADALAPGGTLVVYGA  244 (328)
T ss_pred             ECCchHhHHHHHHhhccCCEEEEEEe
Confidence              344444444556777778887764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=80.04  E-value=2.1  Score=44.49  Aligned_cols=35  Identities=23%  Similarity=0.256  Sum_probs=26.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcE-EEe---cchhhHH
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIK-VAT---ICKDDYE  336 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~-v~l---~~~~~~~  336 (474)
                      .+|.|+|| |  .||+++|..|..++.. .+.   .++++.+
T Consensus         1 ~KVaviGa-G--~VG~s~a~~l~~~~~~~el~LiDi~~~~~~   39 (313)
T COG0039           1 MKVAVIGA-G--NVGSSLAFLLLLQGLGSELVLIDINEEKAE   39 (313)
T ss_pred             CeEEEECC-C--hHHHHHHHHHhcccccceEEEEEccccccc
Confidence            37999999 8  9999999999977776 333   5544444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	474
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 5e-06
 Identities = 68/445 (15%), Positives = 147/445 (33%), Gaps = 118/445 (26%)

Query: 83  YHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGE----EEEE----SADD 134
           +H  HH  F T        + Y Y  I     SV+E +   + +    ++      S ++
Sbjct: 1   HHHHHHMDFETG------EHQYQYKDI----LSVFEDAFVDNFDCKDVQDMPKSILSKEE 50

Query: 135 VDVVHLTHLTTPESIYHLRIGFASLASKPHR-------------YTYTLSQWYLQLLWPF 181
           +D +    + + +++      F +L SK                Y + +S    +   P 
Sbjct: 51  IDHI----IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP- 105

Query: 182 TASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEA 241
                   S +  R ++ + + L       +   +   +YN+  R +    L  +A+LE 
Sbjct: 106 --------SMMT-RMYIEQRDRL-------YNDNQVFAKYNVS-RLQPYLKL-RQALLEL 147

Query: 242 -DAKGVKVISLG-----------LLNQGEELNRNGEIY-----LERQPNKLKIKVVDGSS 284
             AK V +  +             L+   +   + +I+         P  +   +     
Sbjct: 148 RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML---QK 204

Query: 285 LAAAVVVN--SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD-YEK---- 337
           L   +  N  S    ++++ LR     + +   +   L     +   +   +        
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLR----IHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWN 260

Query: 338 ---LKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLT-GKEQARAPKGTIFIPYTQIPPR 393
              L  +I +  +   V     AA  T I L    +T   ++ ++    + + Y    P+
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS----LLLKYLDCRPQ 316

Query: 394 KLRKDCFYHSTPAMI--IPPSLSNMHSC-ENWLGRRVMSAWRIAGIIHA-LEGWDLNECG 449
            L ++    + P  +  I  S+ +  +  +NW   + ++  ++  II + L   +  E  
Sbjct: 317 DLPREVLTTN-PRRLSIIAESIRDGLATWDNW---KHVNCDKLTTIIESSLNVLEPAE-- 370

Query: 450 QTMCDIHQVWHASLRHGFRPL--FP 472
                         R  F  L  FP
Sbjct: 371 -------------YRKMFDRLSVFP 382

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 3e-04
 Identities = 70/549 (12%), Positives = 151/549 (27%), Gaps = 193/549 (35%)

Query: 10  VIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFT 69
           ++   A      L        T++ K   +           F+  +   N++    +L +
Sbjct: 55  IMSKDAVSGTLRLF------WTLLSKQEEM--------VQKFVEEVLRINYK----FLMS 96

Query: 70  VF------PPLKFLMYTPSYHSLH----------------HTQFRTN-YSLFMPIYDYIY 106
                   P +   MY      L+                + + R     L       I 
Sbjct: 97  PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLID 156

Query: 107 GTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESI--------YHLRIGFAS 158
           G +  S  +     +  S + + +    +  ++L +  +PE++        Y +   + S
Sbjct: 157 GVLG-SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTS 215

Query: 159 LASKPHRYTYTLSQ------------------------WYLQLLWPFTASCSVLVSWIYG 194
            +         +                             +    F  SC +L++    
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLT---- 271

Query: 195 RTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLL 254
                   T  K                     +  + L         A     ISL   
Sbjct: 272 --------TRFK---------------------QVTDFL--------SAATTTHISLDHH 294

Query: 255 NQGEELNRNGEI---YLERQPNKLKIKVVDGSSLAAAVVVNSL---PKTTAHVLLRGTVT 308
           +     +    +   YL+ +P  L  +V+  +    +++  S+     T  +      V 
Sbjct: 295 SMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK---HVN 351

Query: 309 ANKVANAVASSLCQMGIKVATICKDDYEKLKL-----RIPVEAQHNLVLSTSYAAHKTKI 363
            +K+   + SSL  +        +  +++L +      IP       +LS         I
Sbjct: 352 CDKLTTIIESSLNVLE---PAEYRKMFDRLSVFPPSAHIPTI-----LLSL--------I 395

Query: 364 W---------LVGDDLTGKE--QARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPS 412
           W         +V + L      + +  + TI IP   +   +L+               +
Sbjct: 396 WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYL---ELKVKL-----------EN 441

Query: 413 LSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCD----IHQVWH-ASLRHG- 466
              +H       R ++  + I       + +D ++      D     H   H  ++ H  
Sbjct: 442 EYALH-------RSIVDHYNI------PKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPE 488

Query: 467 ----FRPLF 471
               FR +F
Sbjct: 489 RMTLFRMVF 497

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	474
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.29
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.95
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.87
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.72
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.68
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.62
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.59
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.55
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	96.52
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.5
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.5
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.49
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.48
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.47
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.46
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.41
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.41
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.39
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.36
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.35
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.34
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.33
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.32
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.32
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.31
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.3
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.27
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.27
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	96.24
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.24
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.23
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.2
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.2
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.2
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.19
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.19
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.19
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.18
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.18
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	96.17
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.13
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.12
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.12
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.12
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.12
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	96.12
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.1
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.1
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	96.1
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.1
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.09
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.09
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.09
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.09
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.09
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.08
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	96.08
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.08
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.07
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	96.07
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	96.06
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.06
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.06
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.05
1spx_A	278	Short-chain reductase family member (5L265); paral	96.04
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.04
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.04
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.04
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.04
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.04
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.03
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	96.02
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.01
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	95.99
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	95.99
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	95.99
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	95.99
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.98
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	95.98
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	95.97
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	95.97
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	95.96
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	95.96
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.95
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.94
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	95.92
1xq1_A	266	Putative tropinone reducatse; structural genomics,	95.92
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	95.92
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	95.91
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	95.91
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	95.9
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	95.9
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	95.89
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	95.89
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	95.88
3cxt_A	291	Dehydrogenase with different specificities; rossma	95.88
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	95.87
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.86
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	95.86
1xkq_A	280	Short-chain reductase family member (5D234); parra	95.85
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.84
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	95.84
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.83
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	95.83
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	95.83
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	95.82
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	95.81
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	95.81
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	95.8
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	95.8
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	95.8
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.79
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	95.78
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	95.77
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.75
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.74
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	95.74
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.73
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	95.73
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	95.73
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	95.72
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	95.71
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	95.69
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	95.69
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	95.69
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	95.67
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	95.67
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.66
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	95.66
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	95.66
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	95.66
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	95.65
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	95.65
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	95.64
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	95.64
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	95.64
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.64
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	95.63
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.63
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	95.61
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	95.61
1x7d_A	350	Ornithine cyclodeaminase; binds NAD+, binds L-orni	95.59
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	95.57
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.57
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	95.55
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.55
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	95.52
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.52
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	95.51
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	95.51
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.48
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	95.48
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	95.47
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	95.46
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	95.45
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.44
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	95.43
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	95.42
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	95.42
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	95.42
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.42
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	95.41
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	95.4
4f6c_A	427	AUSA reductase domain protein; thioester reductase	95.39
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	95.38
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.37
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	95.34
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	95.33
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	95.33
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	95.3
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	95.24
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	95.23
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	95.22
1xhl_A	297	Short-chain dehydrogenase/reductase family member	95.19
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	95.19
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.18
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	95.15
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	95.14
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.14
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	95.14
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	95.1
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.07
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	95.07
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	95.05
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	95.04
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	95.03
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	95.03
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.02
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	94.99
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	94.98
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	94.98
1id1_A	153	Putative potassium channel protein; RCK domain, E.	94.93
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	94.93
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	94.93
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	94.9
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	94.89
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	94.87
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	94.87
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	94.85
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	94.84
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	94.84
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	94.79
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	94.78
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	94.74
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	94.72
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	94.72
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	94.69
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	94.69
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	94.68
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	94.66
3l07_A	285	Bifunctional protein fold; structural genomics, ID	94.64
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	94.59
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	94.59
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	94.56
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	94.54
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	94.54
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	94.52
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	94.46
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	94.46
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	94.45
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	94.44
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	94.44
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	94.4
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	94.4
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	94.36
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	94.35
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	94.3
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	94.26
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	94.25
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	94.24
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	94.24
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	94.23
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	94.23
1xq6_A	253	Unknown protein; structural genomics, protein stru	94.22
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	94.22
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	94.19
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	94.18
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	94.15
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	94.14
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	94.1
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	94.08
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	94.07
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	94.06
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	94.04
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	93.94
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	93.86
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	93.83
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	93.81
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	93.77
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	93.76
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	93.75
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	93.69
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	93.69
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	93.68
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	93.64
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	93.64
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	93.63
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	93.62
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	93.58
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	93.57
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	93.54
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	93.52
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	93.51
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	93.51
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	93.49
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	93.43
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	93.42
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	93.4
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	93.35
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	93.33
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	93.31
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	93.29
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	93.24
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	93.24
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	93.18
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	93.15
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	93.12
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	93.1
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	93.09
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	93.08
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	93.08
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	93.02
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	93.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	92.85
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	92.83
4f6l_B	508	AUSA reductase domain protein; thioester reductase	92.83
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	92.82
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	92.82
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	92.8
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	92.79
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	92.78
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	92.76
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	92.7
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	92.66
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	92.65
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	92.6
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	92.59
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	92.58
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	92.58
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	92.57
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	92.54
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	92.54
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	92.53
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	92.52
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	92.5
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	92.48
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	92.46
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	92.44
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	92.41
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	92.4
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	92.37
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	92.2
3qha_A	296	Putative oxidoreductase; seattle structural genomi	92.2
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	92.2
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	92.19
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	92.18
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	92.14
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	92.12
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	92.11
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	92.08
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	92.05
3tl2_A	315	Malate dehydrogenase; center for structural genomi	91.98
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	91.96
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	91.92
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	91.91
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	91.89
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	91.82
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	91.81
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	91.81
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	91.81
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	91.79
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	91.78
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	91.75
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	91.75
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	91.71
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	91.71
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	91.47
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	91.46
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	91.45
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	91.43
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	91.43
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	91.29
4ezb_A	317	Uncharacterized conserved protein; structural geno	91.22
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	91.21
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	91.18
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	91.16
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	91.15
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	91.14
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	91.14
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	91.1
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	91.06
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	90.95
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	90.93
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	90.89
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	90.83
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	90.8
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	90.77
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	90.72
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	90.71
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	90.7
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	90.62
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	90.61
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	90.61
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	90.58
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	90.5
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	90.46
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	90.39
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	90.36
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	90.34
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	90.33
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	90.25
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	90.25
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	90.22
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	90.2
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	90.17
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	90.16
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	90.14
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	90.12
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	90.09
3c85_A	183	Putative glutathione-regulated potassium-efflux S	90.05
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	90.03
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	89.96
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	89.95
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	89.92
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	89.77
4ep1_A	340	Otcase, ornithine carbamoyltransferase; structural	89.73
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	89.7
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	89.67
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	89.66
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	89.66
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	89.63
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	89.58
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	89.55
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	89.54
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	89.48
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	89.42
4f2g_A	309	Otcase 1, ornithine carbamoyltransferase 1; struct	89.41
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	89.37
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	89.34
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	89.3
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	89.29
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	89.21
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	89.18
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	89.03
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	89.02
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	89.01
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	88.97
4g65_A	461	TRK system potassium uptake protein TRKA; structur	88.95
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	88.92
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	88.87
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	88.85
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	88.83
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	88.73
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	88.71
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	88.71
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	88.66
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	88.57
4b4u_A	303	Bifunctional protein fold; oxidoreductase; HET: NA	88.55
2qrj_A	394	Saccharopine dehydrogenase, NAD+, L-lysine- formin	88.51
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	88.49
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	88.43
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	88.36
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	88.32
2i6u_A	307	Otcase, ornithine carbamoyltransferase; X-RAY crys	88.31
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	88.27
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	88.2
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	88.19
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	88.18
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	88.11
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	88.06
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	88.05
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	88.0
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	87.99
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	87.95
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	87.94
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	87.93
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	87.85
4eye_A	342	Probable oxidoreductase; structural genomics, niai	87.84
1zcj_A	463	Peroxisomal bifunctional enzyme; peroxisomal multi	87.81
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	87.75
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	87.73
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	87.72
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	87.72
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	87.68
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	87.64
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	87.63
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	87.62
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	87.58
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	87.52
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	87.51
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	87.5
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	87.44
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	87.34
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	87.3
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	87.3
4e4y_A	244	Short chain dehydrogenase family protein; structur	87.28
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	87.2
3gd5_A	323	Otcase, ornithine carbamoyltransferase; structural	87.07
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	87.06
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	87.03
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	87.02
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	86.98
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	86.93
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	86.87
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	86.87
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	86.85
1oth_A	321	Protein (ornithine transcarbamoylase); transferase	86.85
1vlv_A	325	Otcase, ornithine carbamoyltransferase; TM1097, st	86.8
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	86.78
3gms_A	340	Putative NADPH:quinone reductase; structural genom	86.74
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	86.66
3csu_A	310	Protein (aspartate carbamoyltransferase); transfer	86.64
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	86.6
1pvv_A	315	Otcase, ornithine carbamoyltransferase; dodecamer;	86.59
3k5p_A	416	D-3-phosphoglycerate dehydrogenase; niaid, ssgcid,	86.45
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	86.44
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	86.39
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	86.34
3k6j_A	460	Protein F01G10.3, confirmed by transcript evidenc;	86.29
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	86.25
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	86.07
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	85.98
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	85.87
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	85.82
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	85.81
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	85.74
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	85.6
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	85.59
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	85.57
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	85.46
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	85.4
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	85.37
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	85.35
1ml4_A	308	Aspartate transcarbamoylase; beta pleated sheet, p	85.29
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	85.28
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	85.26
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	85.21

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.29  E-value=0.0003  Score=61.23  Aligned_cols=88  Identities=18%  Similarity=0.232  Sum_probs=59.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE--cCcC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDDL  370 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv--g~~i  370 (474)
                      ..++|.++|+ |  .+|+++++.|.+.|.+|.+  |+.++.+++.++++.    .....++.++  ++++++|.  +..-
T Consensus        20 ~~~~v~iiG~-G--~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~----~~~~~~~~~~~~~~~Divi~at~~~~   92 (144)
T 3oj0_A           20 GGNKILLVGN-G--MLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEY----EYVLINDIDSLIKNNDVIITATSSKT   92 (144)
T ss_dssp             CCCEEEEECC-S--HHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTC----EEEECSCHHHHHHTCSEEEECSCCSS
T ss_pred             cCCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCC----ceEeecCHHHHhcCCCEEEEeCCCCC
Confidence            4779999997 7  9999999999999999777  899999988877542    1121223332  56777662  2211


Q ss_pred             ChhhhhcCCCCceeecccccCc
Q 011973          371 TGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       371 ~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                      ...+..+.++|.++++++ +|+
T Consensus        93 ~~~~~~~l~~g~~vid~~-~p~  113 (144)
T 3oj0_A           93 PIVEERSLMPGKLFIDLG-NPP  113 (144)
T ss_dssp             CSBCGGGCCTTCEEEECC-SSC
T ss_pred             cEeeHHHcCCCCEEEEcc-CCc
Confidence            111123457788888887 443

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.95  E-value=0.0007  Score=66.85  Aligned_cols=100  Identities=13%  Similarity=0.156  Sum_probs=66.6

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccc
Q 011973          280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY  356 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~  356 (474)
                      |||-....+.--..+.-..++|+++|+ |  -+|+++|..|++.|. +|.+  |+.++.++|.+++....  . +...++
T Consensus       108 TD~~G~~~~L~~~~~~l~~k~vlvlGa-G--g~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~--~-~~~~~~  181 (281)
T 3o8q_A          108 TDGEGLVQDLLAQQVLLKGATILLIGA-G--GAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG--E-VKAQAF  181 (281)
T ss_dssp             CHHHHHHHHHHHTTCCCTTCEEEEECC-S--HHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS--C-EEEEEG
T ss_pred             cHHHHHHHHHHHhCCCccCCEEEEECc-h--HHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC--C-eeEeeH
Confidence            666666555422234446789999998 5  699999999999996 8888  99999999998865432  1 212234


Q ss_pred             cc--CceeEEE----EcC-----cCChhhhhcCCCCceeeccc
Q 011973          357 AA--HKTKIWL----VGD-----DLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       357 ~~--~~~~vwi----vg~-----~i~~~eq~~a~~G~~f~~~~  388 (474)
                      ++  ++++++|    +|-     .++   ....++|++++|.+
T Consensus       182 ~~l~~~aDiIInaTp~gm~~~~~~l~---~~~l~~~~~V~Dlv  221 (281)
T 3o8q_A          182 EQLKQSYDVIINSTSASLDGELPAID---PVIFSSRSVCYDMM  221 (281)
T ss_dssp             GGCCSCEEEEEECSCCCC----CSCC---GGGEEEEEEEEESC
T ss_pred             HHhcCCCCEEEEcCcCCCCCCCCCCC---HHHhCcCCEEEEec
Confidence            32  5678877    231     122   12346777777776

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.87  E-value=0.0019  Score=63.78  Aligned_cols=105  Identities=13%  Similarity=0.083  Sum_probs=65.6

Q ss_pred             ecCChhHHHHHHhc-CcCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecc
Q 011973          280 VDGSSLAAAVVVNS-LPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS  355 (474)
Q Consensus       280 v~GnsltaAvvl~~-ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~  355 (474)
                      |||.....+..-.. +....++|+|+|+ |  .+|+++|..|.+.|. +|++  |+.++.++|.+++..... ..+...+
T Consensus       122 Td~~G~~~~l~~~~~~~l~~~~vlVlGa-G--g~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~-~~~~~~~  197 (297)
T 2egg_A          122 TDGLGYVQALEEEMNITLDGKRILVIGA-G--GGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS-AYFSLAE  197 (297)
T ss_dssp             CHHHHHHHHHHHHTTCCCTTCEEEEECC-S--HHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC-CEECHHH
T ss_pred             CCHHHHHHHHHHhCCCCCCCCEEEEECc-H--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC-ceeeHHH
Confidence            45555555443333 4445678999998 5  799999999999998 8888  899999999988754221 1121112


Q ss_pred             cc-c-CceeEEE--EcCcCCh------hhhhcCCCCceeeccc
Q 011973          356 YA-A-HKTKIWL--VGDDLTG------KEQARAPKGTIFIPYT  388 (474)
Q Consensus       356 ~~-~-~~~~vwi--vg~~i~~------~eq~~a~~G~~f~~~~  388 (474)
                      .. . +.++++|  ++....+      -+....++|++++|.+
T Consensus       198 ~~~~~~~aDivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~  240 (297)
T 2egg_A          198 AETRLAEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDII  240 (297)
T ss_dssp             HHHTGGGCSEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECC
T ss_pred             HHhhhccCCEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcC
Confidence            22 2 5677777  2222211      1122346677777776

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.72  E-value=0.0021  Score=67.63  Aligned_cols=138  Identities=16%  Similarity=0.185  Sum_probs=92.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE----cC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GD  368 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv----g~  368 (474)
                      ..++|.++|. |  .||+++|+.|...|.+|+.  ++..+....... +       ....+.++  +.+||++.    ..
T Consensus       210 ~GktVgIiG~-G--~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~-G-------~~~~sL~eal~~ADVVilt~gt~~  278 (436)
T 3h9u_A          210 AGKTACVCGY-G--DVGKGCAAALRGFGARVVVTEVDPINALQAAME-G-------YQVLLVEDVVEEAHIFVTTTGNDD  278 (436)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-T-------CEECCHHHHTTTCSEEEECSSCSC
T ss_pred             cCCEEEEEee-C--HHHHHHHHHHHHCCCEEEEECCChhhhHHHHHh-C-------CeecCHHHHHhhCCEEEECCCCcC
Confidence            4679999995 4  9999999999999999998  444333222211 1       11224432  66777663    24


Q ss_pred             cCChhhhhcCCCCceeecccccCcc----CC----------CCCee-e--ecCCccc-c-CCCCccccccccccCcchhH
Q 011973          369 DLTGKEQARAPKGTIFIPYTQIPPR----KL----------RKDCF-Y--HSTPAMI-I-PPSLSNMHSCENWLGRRVMS  429 (474)
Q Consensus       369 ~i~~~eq~~a~~G~~f~~~~~v~p~----~~----------R~dc~-y--~~~~am~-v-P~~~~~~~~~e~~~prr~~~  429 (474)
                      .|+.+....|++|+++|.+++.+++    .+          |..+- |  +++-.+. + -+.+-|+. |-.+.|..+|+
T Consensus       279 iI~~e~l~~MK~gAIVINvgRg~vEID~~~L~~~~~~~~~ir~~vd~y~~~dg~~I~LLaeGrLvNl~-~~~Ghp~~vm~  357 (436)
T 3h9u_A          279 IITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKANAKERVEVKPQVDRYTMANGRHIILLAEGRLVNLG-CASGHPSFVMS  357 (436)
T ss_dssp             SBCTTTGGGCCTTEEEEECSSSGGGBCHHHHHHHCSEEEEEETTEEEEECTTSCEEEEEGGGSCHHHH-HSCCSCHHHHH
T ss_pred             ccCHHHHhhcCCCcEEEEeCCCCCccCHHHHHhhcCceEeecCCceEEEcCCCCEEEEecCCCeeccc-CCCCChHHHhh
Confidence            6888999999999999999985542    22          21111 1  2222222 1 12366676 99999999999


Q ss_pred             HHHHhhhhhhhcCCCCC
Q 011973          430 AWRIAGIIHALEGWDLN  446 (474)
Q Consensus       430 Ac~a~~~v~alEgw~~~  446 (474)
                      ..++.-.+-..|=|..+
T Consensus       358 ~sf~~q~la~~~l~~~~  374 (436)
T 3h9u_A          358 NSFCNQVLAQIELWTNR  374 (436)
T ss_dssp             HHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCC
Confidence            99999888888777664

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.68  E-value=0.0021  Score=59.52  Aligned_cols=44  Identities=20%  Similarity=0.295  Sum_probs=39.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++..
T Consensus         3 k~vlITGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   48 (235)
T 3l77_A            3 KVAVITGASR--GIGEAIARALARDGYALALGARSVDRLEKIAHELMQ   48 (235)
T ss_dssp             CEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            5799999998  9999999999999999998  999999998887653

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.62  E-value=0.0079  Score=58.26  Aligned_cols=62  Identities=19%  Similarity=0.176  Sum_probs=46.3

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      |||.....+.--..+.-..++|+|+|+ |  -+|+++|+.|++.|.+|++  |+.++.+++++++..
T Consensus       101 tD~~G~~~~L~~~~~~l~~k~vlViGa-G--g~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~  164 (271)
T 1nyt_A          101 TDGVGLLSDLERLSFIRPGLRILLIGA-G--GASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH  164 (271)
T ss_dssp             CHHHHHHHHHHHHTCCCTTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG
T ss_pred             CCHHHHHHHHHhcCcCcCCCEEEEECC-c--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhc
Confidence            444444443322233434678999998 6  7999999999999999988  899999999988754

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.59  E-value=0.0035  Score=62.98  Aligned_cols=126  Identities=14%  Similarity=0.111  Sum_probs=78.9

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cc---hhhHHHHHhhCccccccceeee
Q 011973          280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC---KDDYEKLKLRIPVEAQHNLVLS  353 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~---~~~~~~l~~~~~~~~~~~l~~~  353 (474)
                      |||-....+.--..+.-..++|+|+|+ |  -+|+|+|..|++.|. +|++  |+   .++.+++.+++....+.. +..
T Consensus       136 TD~~Gf~~~L~~~~~~l~gk~~lVlGa-G--G~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~-~~~  211 (315)
T 3tnl_A          136 TDGTGYMRALKEAGHDIIGKKMTICGA-G--GAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCK-AQL  211 (315)
T ss_dssp             CHHHHHHHHHHHTTCCCTTSEEEEECC-S--HHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCE-EEE
T ss_pred             CCHHHHHHHHHHcCCCccCCEEEEECC-C--hHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCc-eEE
Confidence            566555555432344446789999998 5  799999999999998 7888  88   888888888866543322 111


Q ss_pred             ccc------cc--CceeEEE----EcCc----CChh-hhhcCCCCceeecccccCcc-----CCC-CCeeeecCCcccc
Q 011973          354 TSY------AA--HKTKIWL----VGDD----LTGK-EQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  409 (474)
Q Consensus       354 t~~------~~--~~~~vwi----vg~~----i~~~-eq~~a~~G~~f~~~~~v~p~-----~~R-~dc~y~~~~am~v  409 (474)
                      .++      ++  ++++++|    +|-.    -.|- +....+++.+++|+.=-|.+     +.| +-|.+..+..|-+
T Consensus       212 ~~~~~~~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P~~T~ll~~A~~~G~~~~~Gl~MLv  290 (315)
T 3tnl_A          212 FDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMML  290 (315)
T ss_dssp             EETTCHHHHHHHHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSSSSCHHHHHHHHTTCEEECSHHHHH
T ss_pred             eccchHHHHHhhhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCCCCCHHHHHHHHCCCeEeCcHHHHH
Confidence            122      11  4677877    3311    0111 33356788888888843332     122 5677777776654

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.55  E-value=0.0046  Score=60.30  Aligned_cols=88  Identities=13%  Similarity=0.116  Sum_probs=56.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc--ccc-eeeecccc-c-CceeEEE--Ec
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA--QHN-LVLSTSYA-A-HKTKIWL--VG  367 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~--~~~-l~~~t~~~-~-~~~~vwi--vg  367 (474)
                      ..+.|+|+|+.   -+|+++|+.|++.| +|++  |+.++.+++++++....  ... -+.+++.. . ..++++|  +|
T Consensus       127 ~~k~vlV~GaG---giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag  202 (287)
T 1nvt_A          127 KDKNIVIYGAG---GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATP  202 (287)
T ss_dssp             CSCEEEEECCS---HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSC
T ss_pred             CCCEEEEECch---HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCC
Confidence            45789999985   79999999999999 9998  88899999987764321  000 02233332 3 5677777  33


Q ss_pred             CcCCh------h-hhhcCCCCceeeccc
Q 011973          368 DDLTG------K-EQARAPKGTIFIPYT  388 (474)
Q Consensus       368 ~~i~~------~-eq~~a~~G~~f~~~~  388 (474)
                      ....+      - +..+.++|++++|++
T Consensus       203 ~~~~~~~~~~~~~~~~~l~~~~~v~Dv~  230 (287)
T 1nvt_A          203 IGMYPNIDVEPIVKAEKLREDMVVMDLI  230 (287)
T ss_dssp             TTCTTCCSSCCSSCSTTCCSSSEEEECC
T ss_pred             CCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence            22211      1 223456677777776

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=96.52  E-value=0.0094  Score=63.46  Aligned_cols=139  Identities=16%  Similarity=0.159  Sum_probs=93.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE--E--cC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--V--GD  368 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--v--g~  368 (474)
                      ..+.|+|+|+.   .||+++|+.|.+.|.+|.+  ++.++.++...+.        ..+++.++  +.+++++  .  -+
T Consensus       264 ~GKtVvVtGaG---gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g--------~dv~~lee~~~~aDvVi~atG~~~  332 (488)
T 3ond_A          264 AGKVAVVAGYG---DVGKGCAAALKQAGARVIVTEIDPICALQATMEG--------LQVLTLEDVVSEADIFVTTTGNKD  332 (488)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT--------CEECCGGGTTTTCSEEEECSSCSC
T ss_pred             cCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhC--------CccCCHHHHHHhcCEEEeCCCChh
Confidence            46789999975   8999999999999999998  6666665554431        12233432  5566655  2  36


Q ss_pred             cCChhhhhcCCCCceeecccccCcc-------CC--------CCCee---eec-CCccc--cCCCCccccccccccCcch
Q 011973          369 DLTGKEQARAPKGTIFIPYTQIPPR-------KL--------RKDCF---YHS-TPAMI--IPPSLSNMHSCENWLGRRV  427 (474)
Q Consensus       369 ~i~~~eq~~a~~G~~f~~~~~v~p~-------~~--------R~dc~---y~~-~~am~--vP~~~~~~~~~e~~~prr~  427 (474)
                      .++.+....+++|++++.....+.+       ..        |..+.   +.. ..++.  -.+.+-|+. |-.+.|..+
T Consensus       333 vl~~e~l~~mk~gaiVvNaG~~~~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lLaeGRIVNls-S~~G~p~~v  411 (488)
T 3ond_A          333 IIMLDHMKKMKNNAIVCNIGHFDNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILAEGRLMNLG-CATGHPSFV  411 (488)
T ss_dssp             SBCHHHHTTSCTTEEEEESSSTTTTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEEGGGSCHHHH-HSCCSCHHH
T ss_pred             hhhHHHHHhcCCCeEEEEcCCCCcccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHHcCCcEEEEe-cCcccCccc
Confidence            7888899999999999988864221       11        11111   111 22222  224555665 677899999


Q ss_pred             hHHHHHhhhhhhhcCCCCCc
Q 011973          428 MSAWRIAGIIHALEGWDLNE  447 (474)
Q Consensus       428 ~~Ac~a~~~v~alEgw~~~e  447 (474)
                      |+.-++.-.+-..|-|...+
T Consensus       412 m~~sfa~Q~la~~~l~~~~~  431 (488)
T 3ond_A          412 MSCSFTNQVIAQLELWNEKS  431 (488)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT
T ss_pred             ccccHHHHHHHHHHHHhCCC
Confidence            99988888777787777654

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.50  E-value=0.0038  Score=58.43  Aligned_cols=46  Identities=20%  Similarity=0.235  Sum_probs=40.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus         8 ~~k~vlITGas~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   55 (253)
T 3qiv_A            8 ENKVGIVTGSGG--GIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVA   55 (253)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh
Confidence            457899999998  9999999999999999998  999999998887643

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.50  E-value=0.0046  Score=57.39  Aligned_cols=42  Identities=17%  Similarity=0.218  Sum_probs=38.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++++++
T Consensus         3 k~vlItGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   46 (250)
T 2cfc_A            3 RVAIVTGASS--GNGLAIATRFLARGDRVAALDLSAETLEETARTH   46 (250)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            5799999998  9999999999999999988  8888888887765

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.49  E-value=0.0037  Score=59.29  Aligned_cols=46  Identities=17%  Similarity=0.197  Sum_probs=41.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         6 ~~k~vlVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   53 (252)
T 3h7a_A            6 RNATVAVIGAGD--YIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA   53 (252)
T ss_dssp             CSCEEEEECCSS--HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            356899999998  9999999999999999999  999999999888644

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.48  E-value=0.00059  Score=67.36  Aligned_cols=150  Identities=13%  Similarity=0.100  Sum_probs=85.0

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccc
Q 011973          280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY  356 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~  356 (474)
                      |||-....+.--..+....++|+++|+ |  -+|+++|..|.+.|. +|++  |+.++.++|.+++..      ....+.
T Consensus        99 TD~~G~~~~L~~~~~~l~~k~vlvlGa-G--g~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~------~~~~~~  169 (277)
T 3don_A           99 TDGIGYVNGLKQIYEGIEDAYILILGA-G--GASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINK------INLSHA  169 (277)
T ss_dssp             CHHHHHHHHHHHHSTTGGGCCEEEECC-S--HHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEE------ECHHHH
T ss_pred             ChHHHHHHHHHHhCCCcCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhccc------ccHhhH
Confidence            666666655433334445678999998 5  799999999999998 7888  888877766543211      101122


Q ss_pred             c-c-CceeEEE----EcC--cC-ChhhhhcCCCCceeecccccCcc-----CCC-CCeeeecCCccccCCCCcccccccc
Q 011973          357 A-A-HKTKIWL----VGD--DL-TGKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMIIPPSLSNMHSCEN  421 (474)
Q Consensus       357 ~-~-~~~~vwi----vg~--~i-~~~eq~~a~~G~~f~~~~~v~p~-----~~R-~dc~y~~~~am~vP~~~~~~~~~e~  421 (474)
                      + . ++++++|    +|-  .. ++-+....++|++++|++-.|..     +.| +-|.+..+..|-+=   |+..++|.
T Consensus       170 ~~~~~~aDiVInaTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv~---Qa~~~f~l  246 (277)
T 3don_A          170 ESHLDEFDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIVYNPYKTPILIEAEQRGNPIYNGLDMFVH---QGAESFKI  246 (277)
T ss_dssp             HHTGGGCSEEEECCC-------CCSSCCTTCCSSCEEEESCCSSSSCHHHHHHHHTTCCEECTHHHHHH---HHHHHHHH
T ss_pred             HHHhcCCCEEEECccCCCCCCCcCCCCHHHcCCCCEEEEecCCCCCCHHHHHHHHCcCEEeCCHHHHHH---HHHHHHHH
Confidence            2 1 4567766    321  00 01123456889999998844433     122 56777777766542   33334555


Q ss_pred             ccCcchhHHHHHhhhhhhhc
Q 011973          422 WLGRRVMSAWRIAGIIHALE  441 (474)
Q Consensus       422 ~~prr~~~Ac~a~~~v~alE  441 (474)
                      |..++.=...+-+.+..+++
T Consensus       247 wtg~~~~~~~~~~~l~~~~~  266 (277)
T 3don_A          247 WTNLEPDIKAMKNIVIQKLK  266 (277)
T ss_dssp             HHSSCCCHHHHHHHHHHHHT
T ss_pred             HcCCCCCHHHHHHHHHHHhh
Confidence            54433323334444444443

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.47  E-value=0.0042  Score=59.31  Aligned_cols=48  Identities=19%  Similarity=0.206  Sum_probs=40.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +.+.++|+||.|++=||+|+|+.|+++|.+|.+  |+++.++++++++.+
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~   54 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQ   54 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGG
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            457889999985335999999999999999999  888888888877554

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.46  E-value=0.0077  Score=59.12  Aligned_cols=101  Identities=15%  Similarity=0.128  Sum_probs=64.3

Q ss_pred             ecCChhHHHHHHhc--CcCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeec
Q 011973          280 VDGSSLAAAVVVNS--LPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLST  354 (474)
Q Consensus       280 v~GnsltaAvvl~~--ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t  354 (474)
                      |||-....+ +++.  +....++|+|+|+ |  -+|++++..|++.|+ +|++  |+.++.++|.+++.. .  . +...
T Consensus       101 TD~~G~~~~-lL~~~~~~l~~k~~lvlGa-G--g~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~--~-~~~~  172 (272)
T 3pwz_A          101 FDGIGLLRD-IEENLGEPLRNRRVLLLGA-G--GAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-S--R-LRIS  172 (272)
T ss_dssp             CHHHHHHHH-HHTTSCCCCTTSEEEEECC-S--HHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-T--T-EEEE
T ss_pred             CCHHHHHHH-HHHHcCCCccCCEEEEECc-c--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-C--C-eeEe
Confidence            566555555 1232  3345779999998 4  699999999999996 8888  999999999988665 1  1 2122


Q ss_pred             cccc---CceeEEE----EcCc--CChhhhhcCCCCceeeccc
Q 011973          355 SYAA---HKTKIWL----VGDD--LTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       355 ~~~~---~~~~vwi----vg~~--i~~~eq~~a~~G~~f~~~~  388 (474)
                      ++++   +.++++|    +|-.  ..+-+..+.++|++++|.+
T Consensus       173 ~~~~l~~~~~DivInaTp~gm~~~~~~i~~~~l~~~~~V~Dlv  215 (272)
T 3pwz_A          173 RYEALEGQSFDIVVNATSASLTADLPPLPADVLGEAALAYELA  215 (272)
T ss_dssp             CSGGGTTCCCSEEEECSSGGGGTCCCCCCGGGGTTCSEEEESS
T ss_pred             eHHHhcccCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEee
Confidence            3321   4567777    2310  0111122346777777776

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.41  E-value=0.0049  Score=59.43  Aligned_cols=51  Identities=20%  Similarity=0.245  Sum_probs=43.4

Q ss_pred             hcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          292 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       292 ~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +...-..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus        26 ~~~~l~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   78 (276)
T 3r1i_A           26 DLFDLSGKRALITGAST--GIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAG   78 (276)
T ss_dssp             GGGCCTTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            33344567899999998  9999999999999999998  999999999888643

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.41  E-value=0.0043  Score=58.67  Aligned_cols=47  Identities=11%  Similarity=0.096  Sum_probs=40.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++| +-||+++|+.|+++|.+|.+  |+.++++++++++..
T Consensus        21 ~~k~vlITGasg-~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   69 (266)
T 3o38_A           21 KGKVVLVTAAAG-TGIGSTTARRALLEGADVVISDYHERRLGETRDQLAD   69 (266)
T ss_dssp             TTCEEEESSCSS-SSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCC-CchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHh
Confidence            356899999986 35999999999999999998  899999988887643

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.39  E-value=0.0046  Score=58.62  Aligned_cols=45  Identities=22%  Similarity=0.372  Sum_probs=40.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         6 ~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   52 (257)
T 3imf_A            6 EKVVIITGGSS--GMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ   52 (257)
T ss_dssp             TCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            46799999998  9999999999999999998  999999999888643

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.36  E-value=0.0063  Score=60.01  Aligned_cols=106  Identities=15%  Similarity=0.068  Sum_probs=65.8

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCcccc-ccceeeec-
Q 011973          280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEA-QHNLVLST-  354 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~-~~~l~~~t-  354 (474)
                      |||-....+.--....-..++|+|+|+ |  -+|++++.+|++.|. +|++  |+.++.++|.+++.... +..+...+ 
T Consensus       109 TD~~G~~~~l~~~~~~l~~k~vlVlGa-G--G~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~  185 (283)
T 3jyo_A          109 TDVSGFGRGMEEGLPNAKLDSVVQVGA-G--GVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA  185 (283)
T ss_dssp             HHHHHHHHHHHHHCTTCCCSEEEEECC-S--HHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS
T ss_pred             CCHHHHHHHHHHhCcCcCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH
Confidence            666666555432333445679999999 5  799999999999998 6888  99999999988865432 11211111 


Q ss_pred             -cccc--CceeEEEEcCc--CC-----hhhhhcCCCCceeeccc
Q 011973          355 -SYAA--HKTKIWLVGDD--LT-----GKEQARAPKGTIFIPYT  388 (474)
Q Consensus       355 -~~~~--~~~~vwivg~~--i~-----~~eq~~a~~G~~f~~~~  388 (474)
                       +.++  ++++++|--..  ..     +-+....+++.+++|+.
T Consensus       186 ~~l~~~l~~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~Dlv  229 (283)
T 3jyo_A          186 RGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVV  229 (283)
T ss_dssp             TTHHHHHHHSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECC
T ss_pred             HHHHHHHhcCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEec
Confidence             2222  56778772111  11     11223446667667766

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.35  E-value=0.0046  Score=59.48  Aligned_cols=43  Identities=28%  Similarity=0.285  Sum_probs=36.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.|+|+|++|  -||+++++.|.++|.+|..  |+.++.+.+++.+
T Consensus        11 ~~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~   55 (342)
T 1y1p_A           11 GSLVLVTGANG--FVASHVVEQLLEHGYKVRGTARSASKLANLQKRW   55 (342)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH
T ss_pred             CCEEEEECCcc--HHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHh
Confidence            45899999999  9999999999999999987  8877777665543

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.34  E-value=0.0052  Score=58.64  Aligned_cols=46  Identities=15%  Similarity=0.196  Sum_probs=41.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.++++.
T Consensus        29 ~~k~vlVTGas~--GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~   76 (281)
T 3ppi_A           29 EGASAIVSGGAG--GLGEATVRRLHADGLGVVIADLAAEKGKALADELGN   76 (281)
T ss_dssp             TTEEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC
Confidence            456899999998  9999999999999999999  999999999888743

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.33  E-value=0.0047  Score=58.50  Aligned_cols=46  Identities=20%  Similarity=0.300  Sum_probs=40.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         6 ~~k~~lVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   53 (250)
T 3nyw_A            6 QKGLAIITGASQ--GIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMR   53 (250)
T ss_dssp             CCCEEEEESTTS--HHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
Confidence            456899999998  9999999999999999998  999999988887643

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.32  E-value=0.0035  Score=58.55  Aligned_cols=46  Identities=22%  Similarity=0.296  Sum_probs=41.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++..
T Consensus        13 ~~k~vlVTGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   60 (249)
T 3f9i_A           13 TGKTSLITGASS--GIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKD   60 (249)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhcc
Confidence            577899999998  9999999999999999999  999999999888654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.32  E-value=0.0054  Score=56.99  Aligned_cols=45  Identities=16%  Similarity=0.244  Sum_probs=39.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus        10 ~~~~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   56 (255)
T 1fmc_A           10 DGKCAIITGAGA--GIGKEIAITFATAGASVVVSDINADAANHVVDEIQ   56 (255)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCcc--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence            456899999998  9999999999999999988  88888888777653

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.31  E-value=0.0054  Score=58.36  Aligned_cols=46  Identities=13%  Similarity=0.203  Sum_probs=40.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|+++  -||+++|+.|+++|.+|.+  |+.++++++.+++..
T Consensus        10 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   57 (264)
T 3ucx_A           10 TDKVVVISGVGP--ALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTD   57 (264)
T ss_dssp             TTCEEEEESCCT--THHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCc--HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHh
Confidence            356899999998  9999999999999999999  999999998887643

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.30  E-value=0.0046  Score=58.63  Aligned_cols=45  Identities=16%  Similarity=0.244  Sum_probs=40.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++++++.
T Consensus        28 ~~k~vlITGas~--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   74 (262)
T 3rkr_A           28 SGQVAVVTGASR--GIGAAIARKLGSLGARVVLTARDVEKLRAVEREIV   74 (262)
T ss_dssp             TTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  99999998888754

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.27  E-value=0.0038  Score=57.87  Aligned_cols=44  Identities=7%  Similarity=0.083  Sum_probs=39.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |+++++++++++++.
T Consensus         2 k~vlVTGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   47 (230)
T 3guy_A            2 SLIVITGASS--GLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSN   47 (230)
T ss_dssp             -CEEEESTTS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSS
T ss_pred             CEEEEecCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh
Confidence            4689999998  9999999999999999999  999999999988743

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.27  E-value=0.0055  Score=57.72  Aligned_cols=44  Identities=20%  Similarity=0.244  Sum_probs=39.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++.
T Consensus         7 ~k~~lVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   52 (247)
T 2jah_A            7 GKVALITGASS--GIGEATARALAAEGAAVAIAARRVEKLRALGDELT   52 (247)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999988  88899988887754

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=96.24  E-value=0.035  Score=54.92  Aligned_cols=140  Identities=14%  Similarity=0.128  Sum_probs=86.5

Q ss_pred             cCCcEEEeccccccc-cccccCceeeecCCC-CcceeeecCChhHHH-------HHHhc-CcCCCcEEEEeccCCCchhH
Q 011973          244 KGVKVISLGLLNQGE-ELNRNGEIYLERQPN-KLKIKVVDGSSLAAA-------VVVNS-LPKTTAHVLLRGTVTANKVA  313 (474)
Q Consensus       244 ~G~kV~~LG~ln~~e-~ln~~g~l~v~k~p~-~L~irvv~GnsltaA-------vvl~~-ip~~~~~V~l~Gatg~~kig  313 (474)
                      .|+|+++.=-=|... .+-.-.+..+.-.|+ +.-..+.||+.+|+.       +..+. .+++..+|.++|+ |  .+|
T Consensus        71 ~g~K~~~~~p~N~~~~glp~~~~~~~l~d~~tG~p~a~~d~~~lt~~rT~a~~~la~~~la~~~~~~igiIG~-G--~~g  147 (312)
T 2i99_A           71 LTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTAAVSAIATKFLKPPSSEVLCILGA-G--VQA  147 (312)
T ss_dssp             EEEEEEEEECCCSSSSCSSSEEEEEEEECTTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECC-S--HHH
T ss_pred             EEEEEEEecCCCccccCCCceEEEEEEEECCCCCEEEEEcchhHHHHHHHHHHHHHHHHhCCCCCcEEEEECC-c--HHH
Confidence            588887652212111 111112233444443 355889999998752       22222 2456779999997 5  899


Q ss_pred             HHHHHHHhcc-Cc-EEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE-----cCcCChhhhhcCCCCc
Q 011973          314 NAVASSLCQM-GI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-----GDDLTGKEQARAPKGT  382 (474)
Q Consensus       314 ~ava~~L~~~-~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv-----g~~i~~~eq~~a~~G~  382 (474)
                      +++++.|++. |+ +|.+  |++++.+++.+++..    .+...++.++  +++++++.     ...++.   .++++|+
T Consensus       148 ~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~----~~~~~~~~~e~v~~aDiVi~atp~~~~v~~~---~~l~~g~  220 (312)
T 2i99_A          148 YSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQG----EVRVCSSVQEAVAGADVIITVTLATEPILFG---EWVKPGA  220 (312)
T ss_dssp             HHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSS----CCEECSSHHHHHTTCSEEEECCCCSSCCBCG---GGSCTTC
T ss_pred             HHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhC----CeEEeCCHHHHHhcCCEEEEEeCCCCcccCH---HHcCCCc
Confidence            9999999864 76 7777  899999999887653    1111234443  66777552     222332   3678999


Q ss_pred             eeecccccCcc
Q 011973          383 IFIPYTQIPPR  393 (474)
Q Consensus       383 ~f~~~~~v~p~  393 (474)
                      ++++++-..|.
T Consensus       221 ~vi~~g~~~p~  231 (312)
T 2i99_A          221 HINAVGASRPD  231 (312)
T ss_dssp             EEEECCCCSTT
T ss_pred             EEEeCCCCCCC
Confidence            99998766555

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.24  E-value=0.0057  Score=58.47  Aligned_cols=44  Identities=14%  Similarity=0.199  Sum_probs=39.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++
T Consensus        20 ~~k~~lVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l   65 (267)
T 1vl8_A           20 RGRVALVTGGSR--GLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKL   65 (267)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  8888888887765

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.23  E-value=0.0051  Score=59.18  Aligned_cols=45  Identities=18%  Similarity=0.237  Sum_probs=40.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus         4 ~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~   50 (264)
T 3tfo_A            4 DKVILITGASG--GIGEGIARELGVAGAKILLGARRQARIEAIATEIRD   50 (264)
T ss_dssp             TCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCcc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            46799999998  9999999999999999999  999999998888643

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.20  E-value=0.006  Score=56.90  Aligned_cols=44  Identities=20%  Similarity=0.264  Sum_probs=39.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         5 ~k~vlITGas~--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~   50 (247)
T 3lyl_A            5 EKVALVTGASR--GIGFEVAHALASKGATVVGTATSQASAEKFENSMK   50 (247)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  89998888887754

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.20  E-value=0.007  Score=58.53  Aligned_cols=46  Identities=20%  Similarity=0.270  Sum_probs=41.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus        27 ~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~   74 (283)
T 3v8b_A           27 PSPVALITGAGS--GIGRATALALAADGVTVGALGRTRTEVEEVADEIVG   74 (283)
T ss_dssp             CCCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            456899999998  9999999999999999998  999999999888644

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.20  E-value=0.0044  Score=59.10  Aligned_cols=46  Identities=9%  Similarity=0.207  Sum_probs=40.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++..
T Consensus        19 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   66 (266)
T 4egf_A           19 DGKRALITGATK--GIGADIARAFAAAGARLVLSGRDVSELDAARRALGE   66 (266)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH
Confidence            457899999998  9999999999999999999  999999988887644

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.19  E-value=0.0064  Score=56.25  Aligned_cols=44  Identities=18%  Similarity=0.256  Sum_probs=39.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|.++|.+|.+  |+.++.+++++++.
T Consensus         7 ~~~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (248)
T 2pnf_A            7 GKVSLVTGSTR--GIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIA   52 (248)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888877654

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.19  E-value=0.006  Score=57.68  Aligned_cols=44  Identities=11%  Similarity=0.196  Sum_probs=39.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   52 (263)
T 3ai3_A            7 GKVAVITGSSS--GIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLK   52 (263)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888877754

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.19  E-value=0.0066  Score=59.32  Aligned_cols=46  Identities=15%  Similarity=0.299  Sum_probs=41.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus        40 ~~k~vlVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~   87 (293)
T 3rih_A           40 SARSVLVTGGTK--GIGRGIATVFARAGANVAVAARSPRELSSVTAELGE   87 (293)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTT
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            456899999998  9999999999999999999  999999998888654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.18  E-value=0.0078  Score=56.97  Aligned_cols=45  Identities=20%  Similarity=0.236  Sum_probs=40.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++..
T Consensus         8 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   54 (259)
T 4e6p_A            8 GKSALITGSAR--GIGRAFAEAYVREGATVAIADIDIERARQAAAEIGP   54 (259)
T ss_dssp             TCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence            46899999998  9999999999999999998  899999988887643

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.18  E-value=0.0071  Score=56.46  Aligned_cols=44  Identities=14%  Similarity=0.197  Sum_probs=38.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus        12 ~~k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l   57 (260)
T 3awd_A           12 DNRVAIVTGGAQ--NIGLACVTALAEAGARVIIADLDEAMATKAVEDL   57 (260)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            457899999998  9999999999999999998  8888887776664

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=96.17  E-value=0.0078  Score=57.36  Aligned_cols=45  Identities=27%  Similarity=0.320  Sum_probs=39.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++++++.
T Consensus        31 ~~k~vlVTGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   77 (279)
T 1xg5_A           31 RDRLALVTGASG--GIGAAVARALVQQGLKVVGCARTVGNIEELAAECK   77 (279)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHH
Confidence            356899999998  9999999999999999988  88888888877653

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.13  E-value=0.0072  Score=58.89  Aligned_cols=46  Identities=11%  Similarity=0.166  Sum_probs=40.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus        30 ~gk~vlVTGas~--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   77 (301)
T 3tjr_A           30 DGRAAVVTGGAS--GIGLATATEFARRGARLVLSDVDQPALEQAVNGLRG   77 (301)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            456899999998  9999999999999999999  999999998887643

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.12  E-value=0.0083  Score=57.45  Aligned_cols=46  Identities=17%  Similarity=0.198  Sum_probs=40.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus        10 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   57 (281)
T 3svt_A           10 QDRTYLVTGGGS--GIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEA   57 (281)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH
Confidence            457899999998  9999999999999999998  899988888777543

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.12  E-value=0.0077  Score=57.30  Aligned_cols=46  Identities=15%  Similarity=0.127  Sum_probs=40.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|+++  -||+++|+.|+++|.+|.+  |+.++++++++++..
T Consensus         7 ~~k~~lVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   54 (265)
T 3lf2_A            7 SEAVAVVTGGSS--GIGLATVELLLEAGAAVAFCARDGERLRAAESALRQ   54 (265)
T ss_dssp             TTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH
Confidence            457899999998  9999999999999999998  999999988887654

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.12  E-value=0.0086  Score=58.11  Aligned_cols=62  Identities=19%  Similarity=0.197  Sum_probs=46.0

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      |||.....+.--..+....++|+|+|+ |  -+|+++|..|++.|.+|++  |+.++.++|++++..
T Consensus       101 TD~~G~~~~L~~~~~~~~~~~vlvlGa-G--g~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~  164 (272)
T 1p77_A          101 TDGIGLVTDLQRLNWLRPNQHVLILGA-G--GATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP  164 (272)
T ss_dssp             CHHHHHHHHHHHTTCCCTTCEEEEECC-S--HHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG
T ss_pred             CCHHHHHHHHHHhCCCcCCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccc
Confidence            444444444322223335678999998 6  7999999999999999988  899999999887643

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.12  E-value=0.0067  Score=59.79  Aligned_cols=45  Identities=22%  Similarity=0.281  Sum_probs=40.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++..
T Consensus         8 ~k~vlVTGas~--gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~   54 (319)
T 3ioy_A            8 GRTAFVTGGAN--GVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEA   54 (319)
T ss_dssp             TCEEEEETTTS--THHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCEEEEcCCch--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            46899999998  9999999999999999988  999999988877543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=96.12  E-value=0.0063  Score=56.21  Aligned_cols=43  Identities=26%  Similarity=0.241  Sum_probs=38.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      ..+.|+|+||||  -||+++|+.|.++|.+|.+  |+.++.+.+++.
T Consensus        20 ~~~~ilVtGatG--~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~   64 (236)
T 3e8x_A           20 QGMRVLVVGANG--KVARYLLSELKNKGHEPVAMVRNEEQGPELRER   64 (236)
T ss_dssp             -CCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT
T ss_pred             CCCeEEEECCCC--hHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC
Confidence            356899999999  9999999999999999998  999988887764

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.10  E-value=0.0065  Score=57.30  Aligned_cols=45  Identities=16%  Similarity=0.228  Sum_probs=39.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus        13 ~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   59 (260)
T 2zat_A           13 ENKVALVTASTD--GIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQ   59 (260)
T ss_dssp             TTCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            346899999998  9999999999999999998  88888888776653

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.10  E-value=0.0075  Score=57.37  Aligned_cols=46  Identities=15%  Similarity=0.257  Sum_probs=40.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus         9 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   56 (262)
T 3pk0_A            9 QGRSVVVTGGTK--GIGRGIATVFARAGANVAVAGRSTADIDACVADLDQ   56 (262)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            457899999998  9999999999999999998  999999888877543

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=96.10  E-value=0.008  Score=59.08  Aligned_cols=48  Identities=19%  Similarity=0.169  Sum_probs=42.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  346 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~  346 (474)
                      +-+.++|+|+++  =||+|+|+.|+++|.+|.+  |++|+++++.++++.+.
T Consensus        28 ~gKvalVTGas~--GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~   77 (273)
T 4fgs_A           28 NAKIAVITGATS--GIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGA   77 (273)
T ss_dssp             TTCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTC
T ss_pred             CCCEEEEeCcCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCe
Confidence            457889999997  8999999999999999999  99999999998876543

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.10  E-value=0.0079  Score=57.08  Aligned_cols=45  Identities=24%  Similarity=0.305  Sum_probs=39.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus        12 ~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   58 (267)
T 1iy8_A           12 TDRVVLITGGGS--GLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVL   58 (267)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999988  88888888877653

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.09  E-value=0.0073  Score=57.06  Aligned_cols=44  Identities=14%  Similarity=0.208  Sum_probs=38.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         9 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   54 (260)
T 2ae2_A            9 GCTALVTGGSR--GIGYGIVEELASLGASVYTCSRNQKELNDCLTQWR   54 (260)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999988  88888888777653

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.09  E-value=0.0071  Score=58.25  Aligned_cols=45  Identities=24%  Similarity=0.226  Sum_probs=40.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.++++
T Consensus        27 ~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~   73 (272)
T 4dyv_A           27 GKKIAIVTGAGS--GVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG   73 (272)
T ss_dssp             -CCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC
Confidence            456789999998  9999999999999999998  99999999988865

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.09  E-value=0.008  Score=62.31  Aligned_cols=126  Identities=16%  Similarity=0.246  Sum_probs=84.9

Q ss_pred             HHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cc----hhh----HHHHHhhCccccccc
Q 011973          286 AAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC----KDD----YEKLKLRIPVEAQHN  349 (474)
Q Consensus       286 taAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~----~~~----~~~l~~~~~~~~~~~  349 (474)
                      +.|.+++..+     -...+|++.||-   ..|.++|+.|...|. +|++  |+    ++|    +..+|+++.++....
T Consensus       175 ~lAal~~A~~i~g~~l~~~kVVv~GAG---aAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~  251 (388)
T 1vl6_A          175 VSAAFLNALKLTEKKIEEVKVVVNGIG---AAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE  251 (388)
T ss_dssp             HHHHHHHHHHHHTCCTTTCEEEEECCS---HHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHHhCCCCCCcEEEEECCC---HHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc
Confidence            4445555443     257799999998   899999999999998 7888  55    555    777777755554221


Q ss_pred             eeeecccc-c-CceeEEE---EcCcCChhhhhcCCCCceeecccc----cCcc---CCCCCeeeecCCccccCCCCcccc
Q 011973          350 LVLSTSYA-A-HKTKIWL---VGDDLTGKEQARAPKGTIFIPYTQ----IPPR---KLRKDCFYHSTPAMIIPPSLSNMH  417 (474)
Q Consensus       350 l~~~t~~~-~-~~~~vwi---vg~~i~~~eq~~a~~G~~f~~~~~----v~p~---~~R~dc~y~~~~am~vP~~~~~~~  417 (474)
                       ....++. + +.++|.|   ....+++|..++|.++.++.+.|.    ..|+   +. ..|++.++ -...|+..+|..
T Consensus       252 -~~~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt~E~~p~~a~~~-g~~i~atG-r~~~p~Q~NN~~  328 (388)
T 1vl6_A          252 -RLSGDLETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPVPEIDPELAREA-GAFIVATG-RSDHPNQVNNLL  328 (388)
T ss_dssp             -CCCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSSCSSCHHHHHHT-TCSEEEES-CTTSSSBCCGGG
T ss_pred             -CchhhHHHHHccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCCCCCCHHHHHHh-cCeEEEeC-CCCCCCcCCcee
Confidence             1122454 3 7778877   568899999999999999999985    2233   22 22666555 334566666654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.09  E-value=0.0078  Score=57.75  Aligned_cols=46  Identities=7%  Similarity=0.038  Sum_probs=40.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++..
T Consensus        26 ~~k~~lVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   73 (277)
T 4fc7_A           26 RDKVAFITGGGS--GIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAG   73 (277)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH
Confidence            357899999998  9999999999999999998  888888888777643

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.09  E-value=0.01  Score=57.18  Aligned_cols=45  Identities=16%  Similarity=0.237  Sum_probs=40.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.|+|+|+++  -||+++|+.|+++|.+|.+  |++++++++.++++.
T Consensus         5 gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   51 (281)
T 3zv4_A            5 GEVALITGGAS--GLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGG   51 (281)
T ss_dssp             TCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBT
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCC
Confidence            46899999998  9999999999999999999  999999998887643

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.08  E-value=0.006  Score=57.34  Aligned_cols=46  Identities=20%  Similarity=0.177  Sum_probs=41.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         8 ~~k~vlITGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   55 (261)
T 3n74_A            8 EGKVALITGAGS--GFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGD   55 (261)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCC
Confidence            457899999998  9999999999999999999  999999999887644

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=96.08  E-value=0.011  Score=62.54  Aligned_cols=165  Identities=16%  Similarity=0.092  Sum_probs=104.3

Q ss_pred             cCChhHHHHHHhc--CcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc
Q 011973          281 DGSSLAAAVVVNS--LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA  358 (474)
Q Consensus       281 ~GnsltaAvvl~~--ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~  358 (474)
                      +|.|+..++ .+.  +.-.-++|.|+|.-   .||+++|+.|...|.+|+..+.+....++.. ..+.     .+.++++
T Consensus       229 ~~eslvdgI-~Ratg~~L~GKTVgVIG~G---~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-~~G~-----~vv~LeE  298 (464)
T 3n58_A          229 CKESLVDGI-RRGTDVMMAGKVAVVCGYG---DVGKGSAQSLAGAGARVKVTEVDPICALQAA-MDGF-----EVVTLDD  298 (464)
T ss_dssp             HHHHHHHHH-HHHHCCCCTTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTC-----EECCHHH
T ss_pred             chHHHHHHH-HHhcCCcccCCEEEEECcC---HHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-hcCc-----eeccHHH
Confidence            445544433 333  24467899999964   9999999999999999999333333333322 1111     1223432


Q ss_pred             --CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc----CCCCCeee--ecCCc--cccCC----------CCc
Q 011973          359 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR----KLRKDCFY--HSTPA--MIIPP----------SLS  414 (474)
Q Consensus       359 --~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~----~~R~dc~y--~~~~a--m~vP~----------~~~  414 (474)
                        +.+|+++  .|  ..|+.+....|++|+++|-+++++.+    .+++ +..  ++--+  ..+|.          .+-
T Consensus       299 lL~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgdvEID~~aL~~-~~~~~ik~~v~~~~~~~g~~i~lLaeGrlv  377 (464)
T 3n58_A          299 AASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN-LKWTNVKPQVDLIEFPDGKRLILLSEGRLL  377 (464)
T ss_dssp             HGGGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSSTTTBTCGGGTT-SEEEEEETTEEEEECTTSCEEEEEGGGSBH
T ss_pred             HHhhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCCcccCHHHHHh-CccccccCCeeEEEeCCCCEEEEEeCCcee
Confidence              5666655  33  46789999999999999999986652    3432 210  01000  12332          366


Q ss_pred             cccccccccCcchhHHHHHhhhhhhhcCCCCCc-cch-h---hhhHHH
Q 011973          415 NMHSCENWLGRRVMSAWRIAGIIHALEGWDLNE-CGQ-T---MCDIHQ  457 (474)
Q Consensus       415 ~~~~~e~~~prr~~~Ac~a~~~v~alEgw~~~e-~G~-i---v~~id~  457 (474)
                      |+. |-.+.|..+|+..++--.+-..|=|.+++ ... +   .+++|+
T Consensus       378 NL~-~a~GhP~~vm~~sf~~Q~la~~~l~~~~~~~~~~v~~lP~~lDe  424 (464)
T 3n58_A          378 NLG-NATGHPSFVMSASFTNQVLGQIELFTRTDAYKNEVYVLPKHLDE  424 (464)
T ss_dssp             HHH-HSCCSCHHHHHHHHHHHHHHHHHHHHSGGGCCSSEECCCHHHHH
T ss_pred             ccc-CCCCChHHHHhHHHHHHHHHHHHHHhCccccCCCeeECCHHHHH
Confidence            676 99999999999999998888888887653 332 2   366665

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.08  E-value=0.0077  Score=57.75  Aligned_cols=44  Identities=14%  Similarity=0.163  Sum_probs=39.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++.
T Consensus        26 ~k~vlITGasg--giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~   71 (302)
T 1w6u_A           26 GKVAFITGGGT--GLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQIS   71 (302)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  88888888777754

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.07  E-value=0.0057  Score=59.15  Aligned_cols=45  Identities=18%  Similarity=0.193  Sum_probs=40.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus         8 gk~vlVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   54 (280)
T 3tox_A            8 GKIAIVTGASS--GIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG   54 (280)
T ss_dssp             TCEEEESSTTS--HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            46799999998  9999999999999999999  999999999888643

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=96.07  E-value=0.01  Score=58.85  Aligned_cols=44  Identities=7%  Similarity=0.149  Sum_probs=38.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhcc-Cc-EEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQM-GI-KVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~-~v-~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|+||  .||+++|+.|.++ |. +|.+  |++++.+.+++++.
T Consensus        21 ~k~vlVTGatG--~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~   68 (344)
T 2gn4_A           21 NQTILITGGTG--SFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN   68 (344)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc
Confidence            46899999999  9999999999998 97 8877  88888888877654

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=96.06  E-value=0.0099  Score=56.26  Aligned_cols=44  Identities=23%  Similarity=0.194  Sum_probs=38.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   52 (267)
T 2gdz_A            7 GKVALVTGAAQ--GIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALH   52 (267)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            35799999998  9999999999999999988  88888887766654

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.06  E-value=0.0064  Score=56.46  Aligned_cols=44  Identities=18%  Similarity=0.223  Sum_probs=38.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~-~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+ .++++++++++.
T Consensus         7 ~k~vlVTGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   53 (258)
T 3afn_B            7 GKRVLITGSSQ--GIGLATARLFARAGAKVGLHGRKAPANIDETIASMR   53 (258)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHH
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHH
Confidence            46799999998  9999999999999999988  77 788888777653

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.06  E-value=0.01  Score=57.15  Aligned_cols=48  Identities=15%  Similarity=0.192  Sum_probs=41.9

Q ss_pred             CcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          294 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       294 ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..-..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+++++++++++++
T Consensus        23 ~~l~~k~vlVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   72 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGS--GIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG   72 (277)
T ss_dssp             CTTTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC
T ss_pred             CCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence            334567899999998  9999999999999999999  89999999888754

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.05  E-value=0.0075  Score=57.20  Aligned_cols=46  Identities=17%  Similarity=0.318  Sum_probs=40.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++++++..
T Consensus        11 ~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   58 (256)
T 3gaf_A           11 NDAVAIVTGAAA--GIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ   58 (256)
T ss_dssp             TTCEEEECSCSS--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            457899999998  9999999999999999998  899999988887543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.04  E-value=0.0087  Score=56.88  Aligned_cols=43  Identities=19%  Similarity=0.295  Sum_probs=38.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++++++
T Consensus         6 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   50 (278)
T 1spx_A            6 EKVAIITGSSN--GIGRATAVLFAREGAKVTITGRHAERLEETRQQI   50 (278)
T ss_dssp             TCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  8999998887775

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.04  E-value=0.0081  Score=57.38  Aligned_cols=45  Identities=16%  Similarity=0.208  Sum_probs=39.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus        20 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   66 (273)
T 1ae1_A           20 KGTTALVTGGSK--GIGYAIVEELAGLGARVYTCSRNEKELDECLEIWR   66 (273)
T ss_dssp             TTCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            346899999998  9999999999999999998  88888888777653

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.04  E-value=0.0078  Score=58.53  Aligned_cols=45  Identities=13%  Similarity=0.217  Sum_probs=40.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.++|+|+++  =||+|+|+.|+++|.+|.+  |++++++++.+++..
T Consensus         7 gKvalVTGas~--GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~   53 (254)
T 4fn4_A            7 NKVVIVTGAGS--GIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG   53 (254)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh
Confidence            46789999997  9999999999999999999  999999999998754

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.04  E-value=0.0094  Score=57.20  Aligned_cols=44  Identities=14%  Similarity=0.142  Sum_probs=38.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus        44 ~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~   89 (285)
T 2c07_A           44 NKVALVTGAGR--GIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIK   89 (285)
T ss_dssp             SCEEEEESTTS--HHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  78888888777653

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.04  E-value=0.0079  Score=54.97  Aligned_cols=39  Identities=8%  Similarity=0.090  Sum_probs=34.9

Q ss_pred             cEEEEeccCCCchhHHHHHHHHh-ccCcEEEe--cchh-hHHHHH
Q 011973          299 AHVLLRGTVTANKVANAVASSLC-QMGIKVAT--ICKD-DYEKLK  339 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~-~~~v~v~l--~~~~-~~~~l~  339 (474)
                      +.|+|+||+|  .||+++|+.|. ++|.+|.+  |+++ ++++++
T Consensus         6 k~vlVtGasg--~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~   48 (221)
T 3r6d_A            6 XYITILGAAG--QIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI   48 (221)
T ss_dssp             SEEEEESTTS--HHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH
T ss_pred             EEEEEEeCCc--HHHHHHHHHHHhcCCceEEEEecCccccchhhc
Confidence            4699999999  99999999999 89999988  8888 777775

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.04  E-value=0.0081  Score=56.62  Aligned_cols=43  Identities=21%  Similarity=0.235  Sum_probs=38.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +.|+|+|++|  -||+++|+.|.++|.+|.+  |+.++++++.+++.
T Consensus         3 k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   47 (256)
T 1geg_A            3 KVALVTGAGQ--GIGKAIALRLVKDGFAVAIADYNDATAKAVASEIN   47 (256)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            5789999998  9999999999999999988  88888888877653

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.03  E-value=0.0086  Score=57.60  Aligned_cols=45  Identities=18%  Similarity=0.163  Sum_probs=39.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus        24 ~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~   70 (279)
T 3sju_A           24 PQTAFVTGVSS--GIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRA   70 (279)
T ss_dssp             -CEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            46799999998  9999999999999999998  899999988877543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=96.02  E-value=0.0068  Score=57.53  Aligned_cols=46  Identities=11%  Similarity=0.141  Sum_probs=41.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+++++++++++++.
T Consensus         7 ~gk~~lVTGas~--gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   54 (255)
T 4eso_A            7 QGKKAIVIGGTH--GMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGP   54 (255)
T ss_dssp             TTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence            346899999998  9999999999999999999  999999999888643

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.01  E-value=0.0067  Score=58.61  Aligned_cols=46  Identities=22%  Similarity=0.147  Sum_probs=39.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus        32 ~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   79 (281)
T 4dry_A           32 EGRIALVTGGGT--GVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGG   79 (281)
T ss_dssp             --CEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            457899999998  9999999999999999999  999999988887644

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.00  E-value=0.0063  Score=58.00  Aligned_cols=46  Identities=11%  Similarity=0.071  Sum_probs=40.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++..
T Consensus        11 ~~k~vlITGas~--GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~   58 (311)
T 3o26_A           11 KRRCAVVTGGNK--GIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKN   58 (311)
T ss_dssp             -CCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCcEEEEecCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            456899999998  9999999999999999999  999988887777544

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.00  E-value=0.0083  Score=57.50  Aligned_cols=46  Identities=17%  Similarity=0.267  Sum_probs=40.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.++++.
T Consensus        26 ~gk~vlVTGas~--gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   73 (266)
T 3grp_A           26 TGRKALVTGATG--GIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGK   73 (266)
T ss_dssp             TTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence            457899999998  9999999999999999999  889999988777543

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.00  E-value=0.0093  Score=56.83  Aligned_cols=45  Identities=20%  Similarity=0.236  Sum_probs=39.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus        30 ~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~   76 (272)
T 1yb1_A           30 TGEIVLITGAGH--GIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCK   76 (272)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHH
Confidence            357899999998  9999999999999999988  88888888877653

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=95.99  E-value=0.0073  Score=56.63  Aligned_cols=44  Identities=16%  Similarity=0.271  Sum_probs=40.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |+++++++++++++.
T Consensus         4 k~vlVTGas~--GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   49 (235)
T 3l6e_A            4 GHIIVTGAGS--GLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN   49 (235)
T ss_dssp             CEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC
Confidence            5799999998  9999999999999999998  999999999888743

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=95.99  E-value=0.006  Score=56.79  Aligned_cols=46  Identities=15%  Similarity=0.211  Sum_probs=40.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus        13 ~~k~vlITGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   60 (247)
T 3i1j_A           13 KGRVILVTGAAR--GIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKS   60 (247)
T ss_dssp             TTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHh
Confidence            356899999998  9999999999999999998  999999988887543

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=95.99  E-value=0.0095  Score=56.44  Aligned_cols=44  Identities=20%  Similarity=0.276  Sum_probs=39.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++.
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (262)
T 1zem_A            7 GKVCLVTGAGG--NIGLATALRLAEEGTAIALLDMNREALEKAEASVR   52 (262)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999988  88888888877754

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.98  E-value=0.019  Score=55.60  Aligned_cols=101  Identities=18%  Similarity=0.151  Sum_probs=62.0

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc
Q 011973          280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA  357 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~  357 (474)
                      ||+.....+.--..++...++|.++|+ |  .+|+++|+.|.+.|.+|++  |+.++.+++.++++.    . + .++.+
T Consensus       111 Td~~G~~~~l~~~~~~~~~~~v~iiGa-G--~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~----~-~-~~~~~  181 (275)
T 2hk9_A          111 TDWIGFLKSLKSLIPEVKEKSILVLGA-G--GASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPL----E-V-VNSPE  181 (275)
T ss_dssp             CHHHHHHHHHHHHCTTGGGSEEEEECC-S--HHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCE----E-E-CSCGG
T ss_pred             CCHHHHHHHHHHhCCCcCCCEEEEECc-h--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCC----e-e-ehhHH
Confidence            344444444332234445678999997 5  8999999999999998888  888888888776531    1 1 11333


Q ss_pred             -c-CceeEEEE--cCcCCh-----hhhhcCCCCceeecccc
Q 011973          358 -A-HKTKIWLV--GDDLTG-----KEQARAPKGTIFIPYTQ  389 (474)
Q Consensus       358 -~-~~~~vwiv--g~~i~~-----~eq~~a~~G~~f~~~~~  389 (474)
                       . ++++++|.  .....+     -+...+++|++++|++-
T Consensus       182 ~~~~~aDiVi~atp~~~~~~~~~~i~~~~l~~g~~viDv~~  222 (275)
T 2hk9_A          182 EVIDKVQVIVNTTSVGLKDEDPEIFNYDLIKKDHVVVDIIY  222 (275)
T ss_dssp             GTGGGCSEEEECSSTTSSTTCCCSSCGGGCCTTSEEEESSS
T ss_pred             hhhcCCCEEEEeCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence             2 56777663  111111     11234567777777763

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=95.97  E-value=0.0099  Score=57.01  Aligned_cols=44  Identities=14%  Similarity=0.230  Sum_probs=38.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus        22 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   67 (277)
T 2rhc_B           22 SEVALVTGATS--GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR   67 (277)
T ss_dssp             SCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  88888888777653

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=95.97  E-value=0.0076  Score=55.60  Aligned_cols=44  Identities=20%  Similarity=0.276  Sum_probs=39.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |+.++++++++++.
T Consensus         5 ~k~vlVtGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   50 (234)
T 2ehd_A            5 KGAVLITGASR--GIGEATARLLHAKGYRVGLMARDEKRLQALAAELE   50 (234)
T ss_dssp             CCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh
Confidence            35799999998  9999999999999999988  88889988887764

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=95.96  E-value=0.0097  Score=55.69  Aligned_cols=45  Identities=13%  Similarity=0.130  Sum_probs=39.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.++++
T Consensus        11 ~~k~vlVTGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   57 (265)
T 2o23_A           11 KGLVAVITGGAS--GLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG   57 (265)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhC
Confidence            346899999998  9999999999999999988  88888888877763

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=95.96  E-value=0.0079  Score=60.35  Aligned_cols=127  Identities=14%  Similarity=0.164  Sum_probs=76.3

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cc---hhhHHHHHhhCccccccceeee
Q 011973          280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC---KDDYEKLKLRIPVEAQHNLVLS  353 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~---~~~~~~l~~~~~~~~~~~l~~~  353 (474)
                      |||-....+.--..+....++|+|+|| |  -+|+|+|.+|++.|+ +|++  |+   .++.++|.+++.......+...
T Consensus       130 TD~~Gf~~~L~~~~~~l~gk~~lVlGA-G--Gaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~  206 (312)
T 3t4e_A          130 TDGTGHIRAIKESGFDMRGKTMVLLGA-G--GAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVT  206 (312)
T ss_dssp             HHHHHHHHHHHHTTCCCTTCEEEEECC-S--HHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEE
T ss_pred             CcHHHHHHHHHhcCCCcCCCEEEEECc-C--HHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEe
Confidence            677666666433345556789999998 5  699999999999998 7887  88   7788888877655432221111


Q ss_pred             c--cc---c-c-CceeEEE----EcCc-CC--hh--hhhcCCCCceeecccccCcc-----CCC-CCeeeecCCcccc
Q 011973          354 T--SY---A-A-HKTKIWL----VGDD-LT--GK--EQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  409 (474)
Q Consensus       354 t--~~---~-~-~~~~vwi----vg~~-i~--~~--eq~~a~~G~~f~~~~~v~p~-----~~R-~dc~y~~~~am~v  409 (474)
                      .  +.   . . ++++++|    +|-. .+  +-  +....+++.+++|+.=-|.+     +-| +-|.+..+..|-+
T Consensus       207 ~~~~l~~~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv  284 (312)
T 3t4e_A          207 DLADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLL  284 (312)
T ss_dssp             ETTCHHHHHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSSSSCHHHHHHHHTTCEEECHHHHHH
T ss_pred             chHhhhhhHhhccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCCCCCHHHHHHHHCCCeEECcHHHHH
Confidence            1  21   1 1 4567777    3310 01  10  22345677777777733322     112 4566666666543

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.95  E-value=0.016  Score=59.34  Aligned_cols=145  Identities=20%  Similarity=0.244  Sum_probs=82.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc--cCceeEEE---EcCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA--AHKTKIWL---VGDD  369 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~--~~~~~vwi---vg~~  369 (474)
                      ..++|.|.|. |  .||+.+|+.|.+.|.+|++  ++.+++++++++...+.    +  +..+  +.++||.+   .+..
T Consensus       172 ~GktV~V~G~-G--~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~----v--~~~~ll~~~~DIvip~a~~~~  242 (364)
T 1leh_A          172 EGLAVSVQGL-G--NVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADA----V--APNAIYGVTCDIFAPCALGAV  242 (364)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEE----C--CGGGTTTCCCSEEEECSCSCC
T ss_pred             CcCEEEEECc-h--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE----E--ChHHHhccCCcEeeccchHHH
Confidence            4578999998 5  9999999999999999999  77888888877643111    1  1111  14677766   3555


Q ss_pred             CChhhhhcCCCCceeecccccCccCC-CCCeeeecCCccccCCCCccccccccccCcchhHHHHHhhhhh-hhc--CCCC
Q 011973          370 LTGKEQARAPKGTIFIPYTQIPPRKL-RKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH-ALE--GWDL  445 (474)
Q Consensus       370 i~~~eq~~a~~G~~f~~~~~v~p~~~-R~dc~y~~~~am~vP~~~~~~~~~e~~~prr~~~Ac~a~~~v~-alE--gw~~  445 (474)
                      |+.++...+ +..+++--+. .|... .-+=...+.+..-+|+              .   ++-|+|++- +||  +|+.
T Consensus       243 I~~~~~~~l-g~~iV~e~An-~p~t~~ea~~~L~~~Gi~~~Pd--------------~---~~NaGGv~~s~~E~~~~~~  303 (364)
T 1leh_A          243 LNDFTIPQL-KAKVIAGSAD-NQLKDPRHGKYLHELGIVYAPD--------------Y---VINAGGVINVADELYGYNR  303 (364)
T ss_dssp             BSTTHHHHC-CCSEECCSCS-CCBSSHHHHHHHHHHTCEECCH--------------H---HHTTHHHHHHHHGGGCCCH
T ss_pred             hCHHHHHhC-CCcEEEeCCC-CCcccHHHHHHHHhCCCEEecc--------------e---eecCCceEEEEEeecCCCH
Confidence            665555444 1112222221 11000 0000011111122222              1   244455444 555  8888


Q ss_pred             Cccch-h---hhhHHHHHHHHHhCCCcc
Q 011973          446 NECGQ-T---MCDIHQVWHASLRHGFRP  469 (474)
Q Consensus       446 ~e~G~-i---v~~id~iw~aa~kHGF~p  469 (474)
                      .|+-+ +   ++..++||+.|.++|-.+
T Consensus       304 e~v~~~l~~i~~~~~~i~~~~~~~~~~~  331 (364)
T 1leh_A          304 TRAMKRVDGIYDSIEKIFAISKRDGVPS  331 (364)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCcCH
Confidence            77665 3   466679999999988543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.94  E-value=0.0074  Score=56.38  Aligned_cols=44  Identities=14%  Similarity=0.240  Sum_probs=35.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.++..+++
T Consensus        13 ~~k~vlITGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l   58 (265)
T 1h5q_A           13 VNKTIIVTGGNR--GIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKV   58 (265)
T ss_dssp             TTEEEEEETTTS--HHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHH
Confidence            356899999998  9999999999999999988  7666555444443

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=95.92  E-value=0.0088  Score=57.92  Aligned_cols=43  Identities=16%  Similarity=0.218  Sum_probs=39.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +.|+|+|+++  -||+|+|+.|+++|.+|.+  |++++.++++++.+
T Consensus         3 K~vlVTGas~--GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~   47 (247)
T 3ged_A            3 RGVIVTGGGH--GIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERP   47 (247)
T ss_dssp             CEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCT
T ss_pred             CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC
Confidence            6899999997  9999999999999999999  89999998888754

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=95.92  E-value=0.0084  Score=56.41  Aligned_cols=44  Identities=14%  Similarity=0.233  Sum_probs=38.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++
T Consensus        13 ~~k~vlITGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~   58 (266)
T 1xq1_A           13 KAKTVLVTGGTK--GIGHAIVEEFAGFGAVIHTCARNEYELNECLSKW   58 (266)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            346899999998  9999999999999999998  8888888877664

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=95.92  E-value=0.0095  Score=56.95  Aligned_cols=46  Identities=11%  Similarity=0.190  Sum_probs=40.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.++++.
T Consensus        10 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   57 (271)
T 3tzq_B           10 ENKVAIITGACG--GIGLETSRVLARAGARVVLADLPETDLAGAAASVGR   57 (271)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCT
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCC
Confidence            356899999998  9999999999999999998  899999998888743

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=95.91  E-value=0.01  Score=56.43  Aligned_cols=45  Identities=20%  Similarity=0.196  Sum_probs=39.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~  344 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+   |++++.+++.+++..
T Consensus         4 ~k~vlVTGas~--gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~   51 (258)
T 3oid_A            4 NKCALVTGSSR--GVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEK   51 (258)
T ss_dssp             CCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT
T ss_pred             CCEEEEecCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh
Confidence            46799999998  9999999999999999887   788888888877543

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=95.91  E-value=0.0089  Score=56.92  Aligned_cols=46  Identities=20%  Similarity=0.278  Sum_probs=40.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus         9 ~~k~~lVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   56 (267)
T 3t4x_A            9 KGKTALVTGSTA--GIGKAIATSLVAEGANVLINGRREENVNETIKEIRA   56 (267)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            356899999998  9999999999999999999  898888888777544

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=95.90  E-value=0.0092  Score=55.85  Aligned_cols=44  Identities=18%  Similarity=0.208  Sum_probs=38.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  | +.++.+++++++.
T Consensus         7 ~k~vlITGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~   53 (261)
T 1gee_A            7 GKVVVITGSST--GLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIK   53 (261)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHH
Confidence            46799999998  9999999999999999988  7 7788887777653

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=95.90  E-value=0.0092  Score=55.48  Aligned_cols=44  Identities=7%  Similarity=0.138  Sum_probs=39.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++++++
T Consensus        10 ~~k~vlITGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~   55 (254)
T 2wsb_A           10 DGACAAVTGAGS--GIGLEICRAFAASGARLILIDREAAALDRAAQEL   55 (254)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            456899999998  9999999999999999998  8888888887776

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=95.89  E-value=0.0091  Score=55.96  Aligned_cols=44  Identities=18%  Similarity=0.248  Sum_probs=38.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  | ++++++++.+++.
T Consensus         4 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   50 (246)
T 2uvd_A            4 GKVALVTGASR--GIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIK   50 (246)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH
Confidence            36799999998  9999999999999999988  6 8888888777653

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=95.88  E-value=0.0099  Score=55.60  Aligned_cols=44  Identities=20%  Similarity=0.241  Sum_probs=39.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         7 ~k~vlITGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (264)
T 2pd6_A            7 SALALVTGAGS--GIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLG   52 (264)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC-
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88899888887764

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=95.87  E-value=0.0092  Score=56.39  Aligned_cols=44  Identities=16%  Similarity=0.249  Sum_probs=38.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         5 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   50 (260)
T 2qq5_A            5 GQVCVVTGASR--GIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQ   50 (260)
T ss_dssp             TCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999988  88888888877753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.86  E-value=0.011  Score=54.87  Aligned_cols=43  Identities=19%  Similarity=0.247  Sum_probs=38.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc-------EEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI-------KVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v-------~v~l--~~~~~~~~l~~~~~  343 (474)
                      +.|+++|++|  -||+++|+.|+++|.       +|.+  |++++++++++++.
T Consensus         3 k~vlITGasg--giG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~   54 (244)
T 2bd0_A            3 HILLITGAGK--GIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECR   54 (244)
T ss_dssp             EEEEEETTTS--HHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHH
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHH
Confidence            5799999998  999999999999998       8888  88888888887753

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=95.86  E-value=0.0083  Score=56.65  Aligned_cols=46  Identities=13%  Similarity=0.221  Sum_probs=40.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus        11 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   58 (252)
T 3f1l_A           11 NDRIILVTGASD--GIGREAAMTYARYGATVILLGRNEEKLRQVASHINE   58 (252)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            356899999998  9999999999999999998  999999988887654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.85  E-value=0.011  Score=56.57  Aligned_cols=44  Identities=18%  Similarity=0.270  Sum_probs=39.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         6 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (280)
T 1xkq_A            6 NKTVIITGSSN--GIGRTTAILFAQEGANVTITGRSSERLEETRQIIL   51 (280)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888877754

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=95.84  E-value=0.01  Score=55.72  Aligned_cols=45  Identities=24%  Similarity=0.313  Sum_probs=38.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~  344 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+   +++++.+++++++..
T Consensus         4 ~k~~lVTGas~--gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~   51 (246)
T 3osu_A            4 TKSALVTGASR--GIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKA   51 (246)
T ss_dssp             SCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh
Confidence            46799999998  9999999999999999987   467888888777543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=95.84  E-value=0.011  Score=56.17  Aligned_cols=45  Identities=13%  Similarity=0.197  Sum_probs=40.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++++++..
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   53 (260)
T 1nff_A            7 GKVALVSGGAR--GMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD   53 (260)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc
Confidence            46799999998  9999999999999999998  888889888877654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.83  E-value=0.01  Score=56.51  Aligned_cols=44  Identities=20%  Similarity=0.278  Sum_probs=38.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+   |++++.+++++++.
T Consensus        26 ~k~vlITGas~--gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~   72 (272)
T 4e3z_A           26 TPVVLVTGGSR--GIGAAVCRLAARQGWRVGVNYAANREAADAVVAAIT   72 (272)
T ss_dssp             SCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHH
Confidence            46799999998  9999999999999999966   78888888877753

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=95.83  E-value=0.012  Score=56.84  Aligned_cols=45  Identities=16%  Similarity=0.334  Sum_probs=38.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~~~~~~l~~~~~~  344 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  | +.++.+++++++..
T Consensus        25 ~k~~lVTGas~--GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~   72 (281)
T 3v2h_A           25 TKTAVITGSTS--GIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAG   72 (281)
T ss_dssp             TCEEEEETCSS--HHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhh
Confidence            46899999998  9999999999999999998  5 67788888777543

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=95.83  E-value=0.0031  Score=62.09  Aligned_cols=100  Identities=13%  Similarity=0.122  Sum_probs=66.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc-CceeEEE----Ec---
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWL----VG---  367 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-~~~~vwi----vg---  367 (474)
                      .++|+++|+ |  -.|+|++..|.+.|.+|++  |+.++.++|. ++.-    .   ..++++ .+++++|    +|   
T Consensus       118 ~k~vlvlGa-G--Gaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~----~---~~~~~~l~~~DiVInaTp~Gm~~  186 (269)
T 3phh_A          118 YQNALILGA-G--GSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGC----D---CFMEPPKSAFDLIINATSASLHN  186 (269)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTC----E---EESSCCSSCCSEEEECCTTCCCC
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCC----e---EecHHHhccCCEEEEcccCCCCC
Confidence            789999998 5  7999999999999988888  9999999998 5431    1   113332 4566766    33   


Q ss_pred             -CcCChhhhh-cCCCCceeecccccCcc-----CCC-CCeeeecCCcccc
Q 011973          368 -DDLTGKEQA-RAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  409 (474)
Q Consensus       368 -~~i~~~eq~-~a~~G~~f~~~~~v~p~-----~~R-~dc~y~~~~am~v  409 (474)
                       ..++++.+. .+++|++++|.+--| .     +.| +-|.+..+..|-+
T Consensus       187 ~~~l~~~~l~~~l~~~~~v~D~vY~P-~T~ll~~A~~~G~~~~~Gl~MLv  235 (269)
T 3phh_A          187 ELPLNKEVLKGYFKEGKLAYDLAYGF-LTPFLSLAKELKTPFQDGKDMLI  235 (269)
T ss_dssp             SCSSCHHHHHHHHHHCSEEEESCCSS-CCHHHHHHHHTTCCEECSHHHHH
T ss_pred             CCCCChHHHHhhCCCCCEEEEeCCCC-chHHHHHHHHCcCEEECCHHHHH
Confidence             124333111 347888899988555 3     112 5666666666644

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=95.82  E-value=0.0098  Score=57.11  Aligned_cols=46  Identities=15%  Similarity=0.193  Sum_probs=40.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus        27 ~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   74 (270)
T 3ftp_A           27 DKQVAIVTGASR--GIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQ   74 (270)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            456899999998  9999999999999999998  899999888877543

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=95.81  E-value=0.011  Score=55.90  Aligned_cols=44  Identities=11%  Similarity=0.193  Sum_probs=39.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.++++
T Consensus         5 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   50 (254)
T 1hdc_A            5 GKTVIITGGAR--GLGAEAARQAVAAGARVVLADVLDEEGAATARELG   50 (254)
T ss_dssp             CSEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence            46799999998  9999999999999999988  89999999888873

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.81  E-value=0.011  Score=56.44  Aligned_cols=44  Identities=9%  Similarity=0.145  Sum_probs=40.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         6 ~k~vlITGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (263)
T 2a4k_A            6 GKTILVTGAAS--GIGRAALDLFAREGASLVAVDREERLLAEAVAALE   51 (263)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence            46799999998  9999999999999999998  99999999988875

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=95.80  E-value=0.01  Score=55.90  Aligned_cols=45  Identities=18%  Similarity=0.195  Sum_probs=32.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         6 ~~k~~lVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (257)
T 3tpc_A            6 KSRVFIVTGASS--GLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG   52 (257)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESSCC----------
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC
Confidence            346899999998  9999999999999999998  88888888877764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=95.80  E-value=0.011  Score=54.03  Aligned_cols=34  Identities=12%  Similarity=0.260  Sum_probs=30.1

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhH
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  335 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~  335 (474)
                      +|+|+||+|  -||+++|+.|.++|.+|..  |+.++.
T Consensus         2 ~ilItGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~   37 (219)
T 3dqp_A            2 KIFIVGSTG--RVGKSLLKSLSTTDYQIYAGARKVEQV   37 (219)
T ss_dssp             EEEEESTTS--HHHHHHHHHHTTSSCEEEEEESSGGGS
T ss_pred             eEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCccch
Confidence            589999999  9999999999999999998  766543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=95.80  E-value=0.0095  Score=55.06  Aligned_cols=43  Identities=26%  Similarity=0.319  Sum_probs=37.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~  343 (474)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+   |++++.+++++++.
T Consensus         2 k~vlVTGasg--giG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~   47 (244)
T 1edo_A            2 PVVVVTGASR--GIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIE   47 (244)
T ss_dssp             CEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence            5789999998  9999999999999999976   77888888776643

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.79  E-value=0.012  Score=57.11  Aligned_cols=63  Identities=14%  Similarity=0.010  Sum_probs=46.7

Q ss_pred             ecCChhHHHHHHh-cCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          280 VDGSSLAAAVVVN-SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       280 v~GnsltaAvvl~-~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      |||.....+.--. ..+...+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++..
T Consensus       100 Td~~g~~~~l~~~~~~~l~gk~vlVtGaaG--GiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~  165 (287)
T 1lu9_A          100 TTAAAGVALVVKAAGGSVKGKKAVVLAGTG--PVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK  165 (287)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHhhccCCCCCEEEEECCCc--HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHh
Confidence            4444444433211 2333457899999998  9999999999999999888  888999988877643

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=95.78  E-value=0.01  Score=57.11  Aligned_cols=46  Identities=15%  Similarity=0.140  Sum_probs=41.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++.++++.
T Consensus        15 ~gk~vlVTGas~--gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~   62 (291)
T 3rd5_A           15 AQRTVVITGANS--GLGAVTARELARRGATVIMAVRDTRKGEAAARTMAG   62 (291)
T ss_dssp             TTCEEEEECCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSS
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC
Confidence            457899999998  9999999999999999999  999999999888743

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=95.77  E-value=0.0089  Score=56.39  Aligned_cols=47  Identities=17%  Similarity=0.208  Sum_probs=41.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  345 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~  345 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..+
T Consensus         8 ~gk~~lVTGas~--gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~   56 (248)
T 3op4_A            8 EGKVALVTGASR--GIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDN   56 (248)
T ss_dssp             TTCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc
Confidence            456899999998  9999999999999999998  8999999888876543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.75  E-value=0.011  Score=55.53  Aligned_cols=45  Identities=16%  Similarity=0.164  Sum_probs=38.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  | +.++.+++.+++.
T Consensus        20 ~~k~vlItGasg--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~   67 (274)
T 1ja9_A           20 AGKVALTTGAGR--GIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELK   67 (274)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHH
Confidence            356899999998  9999999999999999988  6 7788887776653

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.74  E-value=0.028  Score=54.95  Aligned_cols=86  Identities=9%  Similarity=0.139  Sum_probs=61.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE--Ec-Cc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG-DD  369 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--vg-~~  369 (474)
                      ..++|.++|+ |  .||+++|+.|...|.+|+.  |+.++.+.+++ .+.    ..+...+.++  +.+++++  +. ..
T Consensus       156 ~g~~v~IiG~-G--~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g~----~~~~~~~l~~~l~~aDvVi~~~p~~~  227 (300)
T 2rir_A          156 HGSQVAVLGL-G--RTGMTIARTFAALGANVKVGARSSAHLARITE-MGL----VPFHTDELKEHVKDIDICINTIPSMI  227 (300)
T ss_dssp             TTSEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTC----EEEEGGGHHHHSTTCSEEEECCSSCC
T ss_pred             CCCEEEEEcc-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCC----eEEchhhHHHHhhCCCEEEECCChhh
Confidence            4678999997 6  9999999999999999998  77777666544 211    1121223332  5667766  22 34


Q ss_pred             CChhhhhcCCCCceeeccccc
Q 011973          370 LTGKEQARAPKGTIFIPYTQI  390 (474)
Q Consensus       370 i~~~eq~~a~~G~~f~~~~~v  390 (474)
                      ++.+....+++|++++++++-
T Consensus       228 i~~~~~~~mk~g~~lin~a~g  248 (300)
T 2rir_A          228 LNQTVLSSMTPKTLILDLASR  248 (300)
T ss_dssp             BCHHHHTTSCTTCEEEECSST
T ss_pred             hCHHHHHhCCCCCEEEEEeCC
Confidence            567778889999999999953

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=95.74  E-value=0.0094  Score=57.39  Aligned_cols=46  Identities=20%  Similarity=0.273  Sum_probs=40.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus        32 ~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   79 (275)
T 4imr_A           32 RGRTALVTGSSR--GIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIA   79 (275)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh
Confidence            457899999998  9999999999999999998  899999888887543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=95.73  E-value=0.013  Score=56.30  Aligned_cols=48  Identities=17%  Similarity=0.206  Sum_probs=39.7

Q ss_pred             CcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973          294 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  343 (474)
Q Consensus       294 ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~  343 (474)
                      ..-..+.|+|+|++|  -||+++|+.|+++|.+|.+   ++.++.+++.+++.
T Consensus        27 ~~l~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~   77 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSR--GIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIE   77 (271)
T ss_dssp             TCCTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH
Confidence            334567899999998  9999999999999999988   55677888777754

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=95.73  E-value=0.014  Score=55.12  Aligned_cols=43  Identities=12%  Similarity=0.234  Sum_probs=37.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh--HHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD--YEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~--~~~l~~~~~  343 (474)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++  ++++.+++.
T Consensus         3 k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~   49 (258)
T 3a28_C            3 KVAMVTGGAQ--GIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIE   49 (258)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHH
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHH
Confidence            5799999998  9999999999999999998  77777  777776653

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.73  E-value=0.012  Score=55.42  Aligned_cols=43  Identities=14%  Similarity=0.251  Sum_probs=39.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.|+|+|++|  -||+++|+.|.++|.+|.+  |++++++++.+++
T Consensus         5 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   49 (245)
T 1uls_A            5 DKAVLITGAAH--GIGRATLELFAKEGARLVACDIEEGPLREAAEAV   49 (245)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc
Confidence            46799999998  9999999999999999998  8889999888776

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=95.72  E-value=0.013  Score=54.04  Aligned_cols=44  Identities=18%  Similarity=0.226  Sum_probs=38.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++
T Consensus         6 ~~~~vlVTGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   51 (244)
T 1cyd_A            6 SGLRALVTGAGK--GIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC   51 (244)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence            346899999998  9999999999999999988  8888888887764

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=95.71  E-value=0.01  Score=53.47  Aligned_cols=38  Identities=8%  Similarity=0.115  Sum_probs=34.5

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  339 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~  339 (474)
                      +|+|+||||  -||+++++.|.++|.+|..  |+.++.+.+.
T Consensus         2 kvlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~   41 (221)
T 3ew7_A            2 KIGIIGATG--RAGSRILEEAKNRGHEVTAIVRNAGKITQTH   41 (221)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCSHHHHHHC
T ss_pred             eEEEEcCCc--hhHHHHHHHHHhCCCEEEEEEcCchhhhhcc
Confidence            599999999  9999999999999999988  8888877764

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=95.69  E-value=0.0094  Score=55.31  Aligned_cols=45  Identities=20%  Similarity=0.199  Sum_probs=39.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++++++..
T Consensus         6 ~k~vlVtGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   52 (251)
T 1zk4_A            6 GKVAIITGGTL--GIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT   52 (251)
T ss_dssp             TCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC
T ss_pred             CcEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc
Confidence            46799999998  9999999999999999988  888888888777543

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=95.69  E-value=0.017  Score=58.82  Aligned_cols=86  Identities=15%  Similarity=0.165  Sum_probs=62.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--cccc--CceeEEEE--cCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYAA--HKTKIWLV--GDD  369 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~~~--~~~~vwiv--g~~  369 (474)
                      .++|+++|+ |  .||+++|+.|...|.+|+.  ++.++++.+++.++...  .....+  +.++  +.++++|.  |-.
T Consensus       168 g~~V~ViG~-G--~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~--~~~~~~~~~l~~~l~~aDvVi~~~~~p  242 (377)
T 2vhw_A          168 PADVVVIGA-G--TAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRI--HTRYSSAYELEGAVKRADLVIGAVLVP  242 (377)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSS--EEEECCHHHHHHHHHHCSEEEECCCCT
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCee--EeccCCHHHHHHHHcCCCEEEECCCcC
Confidence            478999998 7  9999999999999999888  88888888877654332  111111  2222  56677664  432


Q ss_pred             -------CChhhhhcCCCCceeeccc
Q 011973          370 -------LTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       370 -------i~~~eq~~a~~G~~f~~~~  388 (474)
                             ++.+....+++|.++++++
T Consensus       243 ~~~t~~li~~~~l~~mk~g~~iV~va  268 (377)
T 2vhw_A          243 GAKAPKLVSNSLVAHMKPGAVLVDIA  268 (377)
T ss_dssp             TSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred             CCCCcceecHHHHhcCCCCcEEEEEe
Confidence                   2677788899999999999

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=95.69  E-value=0.01  Score=53.94  Aligned_cols=39  Identities=10%  Similarity=0.078  Sum_probs=34.6

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      +|+|+||||  -||+++++.|.++|.+|..  |+.++.+.+..
T Consensus         2 kilVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~   42 (224)
T 3h2s_A            2 KIAVLGATG--RAGSAIVAEARRRGHEVLAVVRDPQKAADRLG   42 (224)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC
T ss_pred             EEEEEcCCC--HHHHHHHHHHHHCCCEEEEEEecccccccccC
Confidence            589999999  9999999999999999988  88888776643

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=95.67  E-value=0.013  Score=55.95  Aligned_cols=44  Identities=14%  Similarity=0.242  Sum_probs=39.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus         9 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   54 (270)
T 1yde_A            9 GKVVVVTGGGR--GIGAGIVRAFVNSGARVVICDKDESGGRALEQELP   54 (270)
T ss_dssp             TCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence            46899999998  9999999999999999998  88899988888764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=95.67  E-value=0.013  Score=55.34  Aligned_cols=46  Identities=15%  Similarity=0.182  Sum_probs=40.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|.++|.+|.+  |+.++.+++.+++..
T Consensus        11 ~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   58 (263)
T 3ak4_A           11 SGRKAIVTGGSK--GIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN   58 (263)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc
Confidence            346899999998  9999999999999999998  888889888877654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.66  E-value=0.012  Score=57.17  Aligned_cols=46  Identities=22%  Similarity=0.226  Sum_probs=40.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCc---EEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGI---KVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v---~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.   +|.+  |+.++++++++++..
T Consensus        32 ~~k~~lVTGas~--GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~   82 (287)
T 3rku_A           32 AKKTVLITGASA--GIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQ   82 (287)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHh
Confidence            356899999998  999999999999887   8888  999999999888644

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=95.66  E-value=0.0058  Score=56.81  Aligned_cols=38  Identities=24%  Similarity=0.238  Sum_probs=32.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEK  337 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~  337 (474)
                      .++|+|+||+|  -||+++|+.|.++| .+|.+  |++++.+.
T Consensus        23 mk~vlVtGatG--~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~   63 (236)
T 3qvo_A           23 MKNVLILGAGG--QIARHVINQLADKQTIKQTLFARQPAKIHK   63 (236)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHTTCTTEEEEEEESSGGGSCS
T ss_pred             ccEEEEEeCCc--HHHHHHHHHHHhCCCceEEEEEcChhhhcc
Confidence            46899999999  99999999999999 88888  77776543

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=95.66  E-value=0.011  Score=56.80  Aligned_cols=45  Identities=16%  Similarity=0.217  Sum_probs=39.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++.
T Consensus        28 ~~k~vlVTGas~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~   74 (276)
T 2b4q_A           28 AGRIALVTGGSR--GIGQMIAQGLLEAGARVFICARDAEACADTATRLS   74 (276)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999988  88888888887764

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A

Probab=95.66  E-value=0.059  Score=53.72  Aligned_cols=142  Identities=11%  Similarity=0.070  Sum_probs=86.8

Q ss_pred             cCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHHH-------HHHhc-CcCCCcEEEEeccCCCchhHH
Q 011973          244 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAAA-------VVVNS-LPKTTAHVLLRGTVTANKVAN  314 (474)
Q Consensus       244 ~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~GnsltaA-------vvl~~-ip~~~~~V~l~Gatg~~kig~  314 (474)
                      .|+|+++.=-=|....+-.-.+..+--+|+ +.-..+.||+.+|+.       +.... -+++.++|.++|+ |  .+|+
T Consensus        62 ~g~K~v~~~p~N~~~glp~~~~~~~L~d~~tG~p~a~~d~~~lt~~RTaa~s~laa~~la~~~~~~v~iIGa-G--~~a~  138 (322)
T 1omo_A           62 AGLKWVNSHPGNPDKGLPTVMALMILNSPETGFPLAVMDATYTTSLRTGAAGGIAAKYLARKNSSVFGFIGC-G--TQAY  138 (322)
T ss_dssp             EEEEEEEECTTTGGGTSCSCCEEEEEECTTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECC-S--HHHH
T ss_pred             eEEEEEecCCCccccCCCceeEEEEEEECCCCCEEEEEcCchHHHHHHHHHHHHHHHhccCCCCCEEEEEcC-c--HHHH
Confidence            588887753223322233333444445544 455899999998752       12222 2567789999998 5  8999


Q ss_pred             HHHHHHhc-c-CcEEEe--cchhhHHHHHhhCccccccceeeeccccc-CceeEEEE----cC-cCChhhhhcCCCCcee
Q 011973          315 AVASSLCQ-M-GIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLV----GD-DLTGKEQARAPKGTIF  384 (474)
Q Consensus       315 ava~~L~~-~-~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-~~~~vwiv----g~-~i~~~eq~~a~~G~~f  384 (474)
                      +++++|++ + ..+|.+  |++++.+++.+++.... .... .++.++ .++++++.    ++ .++.   .+.++|+++
T Consensus       139 ~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~-~~~~-~~~~~e~v~aDvVi~aTp~~~pv~~~---~~l~~G~~V  213 (322)
T 1omo_A          139 FQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRG-ISAS-VQPAEEASRCDVLVTTTPSRKPVVKA---EWVEEGTHI  213 (322)
T ss_dssp             HHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTT-CCEE-ECCHHHHTSSSEEEECCCCSSCCBCG---GGCCTTCEE
T ss_pred             HHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcC-ceEE-ECCHHHHhCCCEEEEeeCCCCceecH---HHcCCCeEE
Confidence            99999985 3 455666  99999999988764321 1112 234432 25677662    22 1221   366899999


Q ss_pred             ecccccCcc
Q 011973          385 IPYTQIPPR  393 (474)
Q Consensus       385 ~~~~~v~p~  393 (474)
                      ++.+-..|.
T Consensus       214 ~~ig~~~p~  222 (322)
T 1omo_A          214 NAIGADGPG  222 (322)
T ss_dssp             EECSCCSTT
T ss_pred             EECCCCCCC
Confidence            998545444

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=95.65  E-value=0.0082  Score=57.82  Aligned_cols=44  Identities=11%  Similarity=0.251  Sum_probs=39.8

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus        22 k~vlVTGas~--gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~   67 (272)
T 2nwq_A           22 STLFITGATS--GFGEACARRFAEAGWSLVLTGRREERLQALAGELSA   67 (272)
T ss_dssp             CEEEESSTTT--SSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT
T ss_pred             cEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc
Confidence            6899999998  9999999999999999998  899999988887644

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=95.65  E-value=0.011  Score=55.71  Aligned_cols=44  Identities=20%  Similarity=0.272  Sum_probs=39.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.++++
T Consensus         6 gk~vlVTGas~--gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (247)
T 3rwb_A            6 GKTALVTGAAQ--GIGKAIAARLAADGATVIVSDINAEGAKAAAASIG   51 (247)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence            46899999998  9999999999999999998  89999998888764

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=95.64  E-value=0.011  Score=55.78  Aligned_cols=44  Identities=16%  Similarity=0.167  Sum_probs=39.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (260)
T 2z1n_A            7 GKLAVVTAGSS--GLGFASALELARNGARLLLFSRNREKLEAAASRIA   52 (260)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  88888888877764

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=95.64  E-value=0.0087  Score=56.58  Aligned_cols=43  Identities=21%  Similarity=0.300  Sum_probs=38.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++.
T Consensus         1 k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   45 (248)
T 3asu_A            1 MIVLVTGATA--GFGECITRRFIQQGHKVIATGRRQERLQELKDELG   45 (248)
T ss_dssp             CEEEETTTTS--TTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence            3689999998  9999999999999999998  89999998888764

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=95.64  E-value=0.014  Score=54.10  Aligned_cols=44  Identities=20%  Similarity=0.334  Sum_probs=39.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |++++++++.++++
T Consensus         7 ~k~vlITGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (244)
T 3d3w_A            7 GRRVLVTGAGK--GIGRGTVQALHATGARVVAVSRTQADLDSLVRECP   52 (244)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST
T ss_pred             CcEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC
Confidence            46799999998  9999999999999999988  88888888877654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=95.64  E-value=0.013  Score=55.62  Aligned_cols=45  Identities=18%  Similarity=0.223  Sum_probs=37.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~  344 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+   |+.++.+++.+++..
T Consensus        26 ~k~vlVTGas~--gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~   73 (267)
T 4iiu_A           26 SRSVLVTGASK--GIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVA   73 (267)
T ss_dssp             CCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh
Confidence            46899999998  9999999999999999965   777888777766533

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=95.63  E-value=0.011  Score=56.14  Aligned_cols=45  Identities=18%  Similarity=0.193  Sum_probs=40.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.++.+.
T Consensus         5 ~k~vlVTGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   51 (281)
T 3m1a_A            5 AKVWLVTGASS--GFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPD   51 (281)
T ss_dssp             CCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTT
T ss_pred             CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccC
Confidence            46899999998  9999999999999999998  999999999887654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.63  E-value=0.024  Score=55.16  Aligned_cols=31  Identities=13%  Similarity=0.189  Sum_probs=29.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ..++|+|+||||  -||+++++.|.++|.+|..
T Consensus        24 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~   54 (351)
T 3ruf_A           24 SPKTWLITGVAG--FIGSNLLEKLLKLNQVVIG   54 (351)
T ss_dssp             SCCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCCeEEEECCCc--HHHHHHHHHHHHCCCEEEE
Confidence            467999999999  9999999999999999988

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=95.61  E-value=0.016  Score=58.70  Aligned_cols=85  Identities=15%  Similarity=0.160  Sum_probs=61.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec---cccc--CceeEEE--EcC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST---SYAA--HKTKIWL--VGD  368 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t---~~~~--~~~~vwi--vg~  368 (474)
                      .++|+++|+ |  .||+++|+.|.+.|.+|++  ++.++++.++++++...  . ...+   +.++  +.++++|  +|-
T Consensus       166 ~~~V~ViGa-G--~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~--~-~~~~~~~~l~~~~~~~DvVi~~~g~  239 (369)
T 2eez_A          166 PASVVILGG-G--TVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRV--I-TLTATEANIKKSVQHADLLIGAVLV  239 (369)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSE--E-EEECCHHHHHHHHHHCSEEEECCC-
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceE--E-EecCCHHHHHHHHhCCCEEEECCCC
Confidence            378999999 8  9999999999999999988  88888888876654321  1 1111   2222  5566766  331


Q ss_pred             -------cCChhhhhcCCCCceeeccc
Q 011973          369 -------DLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       369 -------~i~~~eq~~a~~G~~f~~~~  388 (474)
                             .++.+....+++|.++++++
T Consensus       240 ~~~~~~~li~~~~l~~mk~gg~iV~v~  266 (369)
T 2eez_A          240 PGAKAPKLVTRDMLSLMKEGAVIVDVA  266 (369)
T ss_dssp             ------CCSCHHHHTTSCTTCEEEECC
T ss_pred             CccccchhHHHHHHHhhcCCCEEEEEe
Confidence                   24667788899999999998

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=95.61  E-value=0.016  Score=55.11  Aligned_cols=45  Identities=27%  Similarity=0.378  Sum_probs=37.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  | +.+..+.+++++.
T Consensus        28 ~~k~vlITGas~--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   75 (271)
T 4iin_A           28 TGKNVLITGASK--GIGAEIAKTLASMGLKVWINYRSNAEVADALKNELE   75 (271)
T ss_dssp             SCCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH
Confidence            457899999998  9999999999999999988  5 5666676666543

>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*

Probab=95.59  E-value=0.063  Score=54.39  Aligned_cols=144  Identities=10%  Similarity=-0.043  Sum_probs=85.9

Q ss_pred             cCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHHH-------HHH-hcCcCCCcEEEEeccCCCchhHH
Q 011973          244 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAAA-------VVV-NSLPKTTAHVLLRGTVTANKVAN  314 (474)
Q Consensus       244 ~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~GnsltaA-------vvl-~~ip~~~~~V~l~Gatg~~kig~  314 (474)
                      .|+|+++.=-=|....+-.-.+..+--.|+ +.-+-+.||+.+|+.       +.. .-.+++.++|.++|+ |  .+|+
T Consensus        66 ~g~K~v~~~p~N~~~glp~~~~~~~L~d~~tG~p~a~~d~~~lT~~RTaa~s~laa~~la~~~~~~v~iIGa-G--~~a~  142 (350)
T 1x7d_A           66 YAFKYVNGHPANTARNLHTVMAFGVLADVDSGYPVLLSELTIATALRTAATSLMAAQALARPNARKMALIGN-G--AQSE  142 (350)
T ss_dssp             EEEEEEEECGGGGGGTCCSEEEEEEEEETTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECC-S--TTHH
T ss_pred             EEEEEEEecCCcccCCCccEEEEEEEEECCCCCEEEEEcCCEEEeehhhHHHHHHHHHhccccCCeEEEECC-c--HHHH
Confidence            578877652222222121112223333333 355889999988642       111 223567789999997 5  8999


Q ss_pred             HHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEcC-------cCChhhhhcCCCC
Q 011973          315 AVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD-------DLTGKEQARAPKG  381 (474)
Q Consensus       315 ava~~L~--~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg~-------~i~~~eq~~a~~G  381 (474)
                      ++++.|+  +...+|.+  |++++.+++.+++....+..+...++.++  ++++++|.-.       .++.   .+.++|
T Consensus       143 ~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~~~pvl~~---~~l~~G  219 (350)
T 1x7d_A          143 FQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAYATIITP---DMLEPG  219 (350)
T ss_dssp             HHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSSEEEEECG---GGCCTT
T ss_pred             HHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCCCCceecH---HHcCCC
Confidence            9999987  33456766  99999999998864422222122234443  6777776322       2222   366899


Q ss_pred             ceeecccccCcc
Q 011973          382 TIFIPYTQIPPR  393 (474)
Q Consensus       382 ~~f~~~~~v~p~  393 (474)
                      ++++.++-..|.
T Consensus       220 ~~V~~vgs~~p~  231 (350)
T 1x7d_A          220 MHLNAVGGDCPG  231 (350)
T ss_dssp             CEEEECSCCBTT
T ss_pred             CEEEECCCCCCC
Confidence            999998854443

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=95.57  E-value=0.016  Score=55.46  Aligned_cols=47  Identities=23%  Similarity=0.282  Sum_probs=39.4

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCcc
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIPV  344 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~~~~~~l~~~~~~  344 (474)
                      -..+.|+|+|++|  -||+++|+.|+++|.+|.+  | +.++.+++.+++..
T Consensus        26 l~~k~vlVTGas~--gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~   75 (269)
T 4dmm_A           26 LTDRIALVTGASR--GIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAA   75 (269)
T ss_dssp             TTTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh
Confidence            3467899999998  9999999999999999988  4 77788888777543

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.57  E-value=0.06  Score=52.51  Aligned_cols=88  Identities=20%  Similarity=0.226  Sum_probs=61.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE--Ec-Cc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG-DD  369 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--vg-~~  369 (474)
                      ..++|.++|+ |  .||+++|+.|...|.+|+.  |+.++.+.+++ .+.+    .+...+.++  +.+++++  +. ..
T Consensus       154 ~g~~v~IiG~-G--~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~----~~~~~~l~~~l~~aDvVi~~~p~~~  225 (293)
T 3d4o_A          154 HGANVAVLGL-G--RVGMSVARKFAALGAKVKVGARESDLLARIAE-MGME----PFHISKAAQELRDVDVCINTIPALV  225 (293)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTSE----EEEGGGHHHHTTTCSEEEECCSSCC
T ss_pred             CCCEEEEEee-C--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-CCCe----ecChhhHHHHhcCCCEEEECCChHH
Confidence            5678999996 6  9999999999999999988  67666665542 2211    111123322  5666655  22 34


Q ss_pred             CChhhhhcCCCCceeecccccCc
Q 011973          370 LTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       370 i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                      ++.+....+++|++++++++-|.
T Consensus       226 i~~~~l~~mk~~~~lin~ar~~~  248 (293)
T 3d4o_A          226 VTANVLAEMPSHTFVIDLASKPG  248 (293)
T ss_dssp             BCHHHHHHSCTTCEEEECSSTTC
T ss_pred             hCHHHHHhcCCCCEEEEecCCCC
Confidence            56677888999999999996443

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=95.55  E-value=0.013  Score=56.27  Aligned_cols=44  Identities=18%  Similarity=0.284  Sum_probs=38.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~-~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+. ++++++.+++.
T Consensus        23 ~k~~lVTGas~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~   69 (288)
T 2x9g_A           23 APAAVVTGAAK--RIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELN   69 (288)
T ss_dssp             CCEEEETTCSS--HHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  777 88888877754

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.55  E-value=0.021  Score=53.63  Aligned_cols=44  Identities=18%  Similarity=0.218  Sum_probs=36.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+   ++++..+.+++++.
T Consensus         7 ~k~vlVTGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~   53 (264)
T 3i4f_A            7 VRHALITAGTK--GLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYK   53 (264)
T ss_dssp             CCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTG
T ss_pred             cCEEEEeCCCc--hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHH
Confidence            46799999998  9999999999999999988   45556666666644

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=95.52  E-value=0.018  Score=55.38  Aligned_cols=46  Identities=11%  Similarity=0.151  Sum_probs=39.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+   ++.++.+++.+++..
T Consensus        28 ~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~   76 (280)
T 4da9_A           28 ARPVAIVTGGRR--GIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSG   76 (280)
T ss_dssp             CCCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCC--HHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHh
Confidence            456899999998  9999999999999999988   578888888777543

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.52  E-value=0.017  Score=54.36  Aligned_cols=44  Identities=20%  Similarity=0.228  Sum_probs=39.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhc---cCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQ---MGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~---~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|++   +|.+|.+  |++++++++.+++.
T Consensus         6 ~k~~lVTGas~--gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~   54 (259)
T 1oaa_A            6 CAVCVLTGASR--GFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELG   54 (259)
T ss_dssp             SEEEEESSCSS--HHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCC--hHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHH
Confidence            46789999998  999999999998   8999998  89999988887764

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=95.51  E-value=0.02  Score=54.56  Aligned_cols=46  Identities=13%  Similarity=0.203  Sum_probs=38.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-----cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-----ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-----~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|+++  -||+++|+.|+++|.+|.+     ++.++++++++++..
T Consensus        10 ~~k~vlVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~   60 (262)
T 3ksu_A           10 KNKVIVIAGGIK--NLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELED   60 (262)
T ss_dssp             TTCEEEEETCSS--HHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHh
Confidence            457899999998  9999999999999999998     356678888777543

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=95.51  E-value=0.017  Score=59.61  Aligned_cols=91  Identities=12%  Similarity=0.114  Sum_probs=66.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc----------ccce--------e-eeccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA----------QHNL--------V-LSTSY  356 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~----------~~~l--------~-~~t~~  356 (474)
                      .++|+++|+ |  .+|..+|+.|...|.+|++  ++.++++.+++. +...          +.+.        . +..++
T Consensus       184 ~~kV~ViG~-G--~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l-Ga~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l  259 (381)
T 3p2y_A          184 PASALVLGV-G--VAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV-GAQWLDLGIDAAGEGGYARELSEAERAQQQQAL  259 (381)
T ss_dssp             CCEEEEESC-S--HHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT-TCEECCCC-------------CHHHHHHHHHHH
T ss_pred             CCEEEEECc-h--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence            578999999 5  9999999999999999998  888888888762 2211          0010        0 00122


Q ss_pred             cc--CceeEEEE-----c----CcCChhhhhcCCCCceeecccccCcc
Q 011973          357 AA--HKTKIWLV-----G----DDLTGKEQARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       357 ~~--~~~~vwiv-----g----~~i~~~eq~~a~~G~~f~~~~~v~p~  393 (474)
                      ++  +.+|++|.     |    ..++.+..+.|+||++++|++ +++-
T Consensus       260 ~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA-~d~G  306 (381)
T 3p2y_A          260 EDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA-GETG  306 (381)
T ss_dssp             HHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT-GGGT
T ss_pred             HHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe-CCCC
Confidence            22  77788772     2    358999999999999999999 7765

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.48  E-value=0.015  Score=53.75  Aligned_cols=43  Identities=14%  Similarity=0.230  Sum_probs=36.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~  342 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+   |++++.+++.+++
T Consensus         5 ~~~vlItGasg--giG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~   50 (247)
T 2hq1_A            5 GKTAIVTGSSR--GLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEF   50 (247)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHH
T ss_pred             CcEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHH
Confidence            36799999998  9999999999999999987   5667777776664

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=95.48  E-value=0.017  Score=55.02  Aligned_cols=46  Identities=28%  Similarity=0.320  Sum_probs=38.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|+++  -||+++|+.|+++|.+|.+   ++.++.+++++++..
T Consensus        17 ~~k~~lVTGas~--gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~   65 (270)
T 3is3_A           17 DGKVALVTGSGR--GIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA   65 (270)
T ss_dssp             TTCEEEESCTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh
Confidence            357899999998  9999999999999999988   567778888777543

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=95.47  E-value=0.012  Score=56.62  Aligned_cols=45  Identities=13%  Similarity=0.166  Sum_probs=40.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++.
T Consensus        25 ~gk~~lVTGas~--gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~   71 (271)
T 4ibo_A           25 GGRTALVTGSSR--GLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFR   71 (271)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            457899999998  9999999999999999999  89999998888764

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=95.46  E-value=0.0067  Score=55.33  Aligned_cols=36  Identities=17%  Similarity=0.247  Sum_probs=31.8

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHH
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  336 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~  336 (474)
                      ++|+|+||+|  -||+++++.|.++|.+|..  |+.++.+
T Consensus         5 ~~ilItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~   42 (227)
T 3dhn_A            5 KKIVLIGASG--FVGSALLNEALNRGFEVTAVVRHPEKIK   42 (227)
T ss_dssp             CEEEEETCCH--HHHHHHHHHHHTTTCEEEEECSCGGGCC
T ss_pred             CEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEEcCcccch
Confidence            5799999999  9999999999999999998  7766543

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=95.45  E-value=0.0099  Score=57.79  Aligned_cols=47  Identities=19%  Similarity=0.164  Sum_probs=41.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  345 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~  345 (474)
                      +-+.++|+|+++  -||+|+|+.|+++|.+|.+  |+++++++..+++...
T Consensus         8 ~gKvalVTGas~--GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~   56 (255)
T 4g81_D            8 TGKTALVTGSAR--GLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK   56 (255)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            456789999997  9999999999999999999  9999999888886543

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=95.44  E-value=0.018  Score=55.23  Aligned_cols=45  Identities=20%  Similarity=0.238  Sum_probs=38.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+   ++.++.+++++++.
T Consensus        26 ~~k~~lVTGas~--GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~   73 (267)
T 3u5t_A           26 TNKVAIVTGASR--GIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIE   73 (267)
T ss_dssp             -CCEEEEESCSS--HHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence            357899999998  9999999999999999987   67778888877653

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=95.43  E-value=0.013  Score=55.70  Aligned_cols=32  Identities=9%  Similarity=0.121  Sum_probs=28.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  332 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~  332 (474)
                      ++|+|+||||  .||+++++.|.++|.+|..  |+.
T Consensus         3 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~   36 (307)
T 2gas_A            3 NKILILGPTG--AIGRHIVWASIKAGNPTYALVRKT   36 (307)
T ss_dssp             CCEEEESTTS--TTHHHHHHHHHHHTCCEEEEECCS
T ss_pred             cEEEEECCCc--hHHHHHHHHHHhCCCcEEEEECCC
Confidence            4699999999  9999999999999988877  765

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=95.42  E-value=0.015  Score=54.85  Aligned_cols=43  Identities=26%  Similarity=0.237  Sum_probs=38.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.|+|+|++|  -||+++|+.|.++|.+|.+  |++++++++.+++
T Consensus         6 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   50 (253)
T 1hxh_A            6 GKVALVTGGAS--GVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL   50 (253)
T ss_dssp             TCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc
Confidence            46799999998  9999999999999999988  8888898888776

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=95.42  E-value=0.015  Score=55.54  Aligned_cols=31  Identities=13%  Similarity=0.186  Sum_probs=28.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC  331 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~  331 (474)
                      ++|+|+||||  .||+++++.|.++|.+|..  |+
T Consensus         5 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~R~   37 (313)
T 1qyd_A            5 SRVLIVGGTG--YIGKRIVNASISLGHPTYVLFRP   37 (313)
T ss_dssp             CCEEEESTTS--TTHHHHHHHHHHTTCCEEEECCS
T ss_pred             CEEEEEcCCc--HHHHHHHHHHHhCCCcEEEEECC
Confidence            5699999999  9999999999999998887  66

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=95.42  E-value=0.013  Score=56.56  Aligned_cols=45  Identities=22%  Similarity=0.231  Sum_probs=40.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.++++
T Consensus        28 ~gk~vlVTGas~--gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~   74 (277)
T 3gvc_A           28 AGKVAIVTGAGA--GIGLAVARRLADEGCHVLCADIDGDAADAAATKIG   74 (277)
T ss_dssp             TTCEEEETTTTS--THHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC
Confidence            456899999998  9999999999999999998  89999999888864

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.42  E-value=0.01  Score=59.95  Aligned_cols=90  Identities=10%  Similarity=0.077  Sum_probs=60.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccccee-e-e--ccccc--CceeEEE--E
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV-L-S--TSYAA--HKTKIWL--V  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~-~-~--t~~~~--~~~~vwi--v  366 (474)
                      ..++|+|+|+..  -||+.+|+.|.+.|..|++  |+..+.....+++......... . .  .++++  +.+||+|  +
T Consensus       176 ~gk~vvVIG~G~--iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAt  253 (320)
T 1edz_A          176 YGKKCIVINRSE--IVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV  253 (320)
T ss_dssp             TTCEEEEECCCT--TTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CCCEEEEECCCc--chHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECC
Confidence            578999999985  5799999999999999998  6655544444444432211111 0 1  22333  6777777  4


Q ss_pred             cCc---CChhhhhcCCCCceeecccccCc
Q 011973          367 GDD---LTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       367 g~~---i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                      |.-   ++.+..   ++|++++|++ +|+
T Consensus       254 g~p~~vI~~e~v---k~GavVIDVg-i~r  278 (320)
T 1edz_A          254 PSENYKFPTEYI---KEGAVCINFA-CTK  278 (320)
T ss_dssp             CCTTCCBCTTTS---CTTEEEEECS-SSC
T ss_pred             CCCcceeCHHHc---CCCeEEEEcC-CCc
Confidence            442   666665   8999999999 554

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=95.41  E-value=0.014  Score=56.11  Aligned_cols=44  Identities=14%  Similarity=0.212  Sum_probs=39.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++.
T Consensus        18 ~k~vlVTGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~   63 (303)
T 1yxm_A           18 GQVAIVTGGAT--GIGKAIVKELLELGSNVVIASRKLERLKSAADELQ   63 (303)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  88888888777653

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.40  E-value=0.022  Score=54.51  Aligned_cols=46  Identities=13%  Similarity=0.194  Sum_probs=39.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-------------chhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-------------CKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-------------~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |             ++++++++++++..
T Consensus        14 ~gk~~lVTGas~--gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (280)
T 3pgx_A           14 QGRVAFITGAAR--GQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVED   74 (280)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHh
Confidence            456899999998  9999999999999999998  5             67888888777543

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=95.39  E-value=0.0092  Score=60.39  Aligned_cols=113  Identities=11%  Similarity=-0.008  Sum_probs=64.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhCccccccceeeeccccc-Ccee-EEEEcCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRIPVEAQHNLVLSTSYAA-HKTK-IWLVGDD  369 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~---~~~~l~~~~~~~~~~~l~~~t~~~~-~~~~-vwivg~~  369 (474)
                      ..+.|+|+||||  -||+++|+.|.++|.+|.+  |+.+   ..+++++++......      ...+ ...+ .++.||.
T Consensus        68 ~~~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~------~~~~~~~~~v~~v~~Dl  139 (427)
T 4f6c_A           68 PLGNTLLTGATG--FLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSE------ETVEMMLSNIEVIVGDF  139 (427)
T ss_dssp             CCEEEEEECTTS--HHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCH------HHHHHHHTTEEEEEECC
T ss_pred             CCCEEEEecCCc--HHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccc------cccccccCceEEEeCCC
Confidence            346899999999  9999999999999999988  7666   455555443221100      0000 0122 3667777


Q ss_pred             CChhhhhcCCCCceeecccccCccCCCCCeeeecCCccccCCCCccccccccccCcchhHHHHH
Q 011973          370 LTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRI  433 (474)
Q Consensus       370 i~~~eq~~a~~G~~f~~~~~v~p~~~R~dc~y~~~~am~vP~~~~~~~~~e~~~prr~~~Ac~a  433 (474)
                      .+++...                ..-+-|++|+..+.+..+.+++.+..-|..-...++.||..
T Consensus       140 ~d~~~l~----------------~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~  187 (427)
T 4f6c_A          140 ECMDDVV----------------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ  187 (427)
T ss_dssp             ---CCCC----------------CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccCC----------------CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            6655552                11346788887766665555554444455555666666654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=95.38  E-value=0.015  Score=55.76  Aligned_cols=44  Identities=20%  Similarity=0.318  Sum_probs=39.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++++++.
T Consensus        28 ~k~vlITGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   73 (286)
T 1xu9_A           28 GKKVIVTGASK--GIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL   73 (286)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  99999988877653

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.37  E-value=0.035  Score=53.11  Aligned_cols=79  Identities=13%  Similarity=0.131  Sum_probs=52.9

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc-CceeEEEEcCcCC--h--
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLVGDDLT--G--  372 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-~~~~vwivg~~i~--~--  372 (474)
                      +|.++|+ |  .+|+++|+.|.+.|.+|++  |+.++.+++.++.+..       .+++++ ++++++|.-....  +  
T Consensus       118 ~v~iiG~-G--~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-------~~~~~~~~~~Divi~~tp~~~~~~~  187 (263)
T 2d5c_A          118 PALVLGA-G--GAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-------AVPLEKAREARLLVNATRVGLEDPS  187 (263)
T ss_dssp             CEEEECC-S--HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-------ECCGGGGGGCSEEEECSSTTTTCTT
T ss_pred             eEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-------hhhHhhccCCCEEEEccCCCCCCCC
Confidence            8999997 5  8999999999999988888  8888888888764432       112222 4566666311111  1  


Q ss_pred             ---hhhhcCCCCceeeccc
Q 011973          373 ---KEQARAPKGTIFIPYT  388 (474)
Q Consensus       373 ---~eq~~a~~G~~f~~~~  388 (474)
                         -+...+++|+++++++
T Consensus       188 ~~~l~~~~l~~g~~viD~~  206 (263)
T 2d5c_A          188 ASPLPAELFPEEGAAVDLV  206 (263)
T ss_dssp             CCSSCGGGSCSSSEEEESC
T ss_pred             CCCCCHHHcCCCCEEEEee
Confidence               0123467788888877

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=95.34  E-value=0.025  Score=53.66  Aligned_cols=44  Identities=18%  Similarity=0.212  Sum_probs=37.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+   ++.++.+++.+++
T Consensus         7 ~~k~vlVTGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~   53 (259)
T 3edm_A            7 TNRTIVVAGAGR--DIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEI   53 (259)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            356899999998  9999999999999999998   5667777776664

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=95.33  E-value=0.015  Score=54.10  Aligned_cols=44  Identities=14%  Similarity=0.135  Sum_probs=38.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhc-cCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~-~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|++ +|.+|.+  |+.++.+++.+++.
T Consensus         4 ~k~vlITGasg--gIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~   50 (276)
T 1wma_A            4 IHVALVTGGNK--GIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQ   50 (276)
T ss_dssp             CCEEEESSCSS--HHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHH
Confidence            46799999998  999999999999 9999998  88888888777653

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=95.33  E-value=0.018  Score=54.31  Aligned_cols=46  Identities=20%  Similarity=0.262  Sum_probs=39.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++..
T Consensus        15 ~~k~vlITGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   62 (278)
T 2bgk_A           15 QDKVAIITGGAG--GIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS   62 (278)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC
T ss_pred             cCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC
Confidence            356899999998  9999999999999999998  888888877777643

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=95.30  E-value=0.024  Score=53.42  Aligned_cols=47  Identities=15%  Similarity=0.234  Sum_probs=34.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~---~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|++-||+++|+.|+++|.+|.+  |+.+   ..+++.++.+
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~   57 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD   57 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC
Confidence            346899999997223999999999999999998  5553   3344444443

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=95.24  E-value=0.015  Score=55.27  Aligned_cols=44  Identities=16%  Similarity=0.337  Sum_probs=39.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  | ++++++++.+++.
T Consensus        11 ~k~~lVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   57 (276)
T 1mxh_A           11 CPAAVITGGAR--RIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELN   57 (276)
T ss_dssp             CCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH
Confidence            35799999998  9999999999999999998  7 8888888887764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=95.23  E-value=0.023  Score=54.01  Aligned_cols=44  Identities=16%  Similarity=0.271  Sum_probs=37.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc------------hhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC------------KDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~------------~~~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+            .++++++.+++
T Consensus        12 ~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~   69 (278)
T 3sx2_A           12 TGKVAFITGAAR--GQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLV   69 (278)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHH
Confidence            457899999998  9999999999999999998  55            66777766654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.22  E-value=0.025  Score=53.71  Aligned_cols=44  Identities=25%  Similarity=0.397  Sum_probs=37.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc------------hhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC------------KDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~------------~~~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+            .+++++++.++
T Consensus         9 ~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (287)
T 3pxx_A            9 QDKVVLVTGGAR--GQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV   66 (287)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHH
Confidence            356899999998  9999999999999999998  55            66777776664

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.19  E-value=0.015  Score=56.64  Aligned_cols=45  Identities=20%  Similarity=0.314  Sum_probs=39.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus        25 ~~k~vlVTGas~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~   71 (297)
T 1xhl_A           25 SGKSVIITGSSN--GIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQIL   71 (297)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            346799999998  9999999999999999998  89898888877754

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.19  E-value=0.017  Score=54.09  Aligned_cols=44  Identities=11%  Similarity=0.124  Sum_probs=36.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+   |+.++.+++.+++
T Consensus        12 ~~k~vlITGas~--giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~   58 (256)
T 3ezl_A           12 SQRIAYVTGGMG--GIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQ   58 (256)
T ss_dssp             -CEEEEETTTTS--HHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHH
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            578899999998  9999999999999999988   6666666655553

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.18  E-value=0.029  Score=53.79  Aligned_cols=32  Identities=13%  Similarity=0.051  Sum_probs=28.9

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  332 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~  332 (474)
                      ++|+|+||+|  -||+++++.|.++|.+|..  |+.
T Consensus         3 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~   36 (311)
T 3m2p_A            3 LKIAVTGGTG--FLGQYVVESIKNDGNTPIILTRSI   36 (311)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCC
T ss_pred             CEEEEECCCc--HHHHHHHHHHHhCCCEEEEEeCCC
Confidence            5799999999  9999999999999999988  553

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=95.15  E-value=0.016  Score=54.77  Aligned_cols=45  Identities=13%  Similarity=0.296  Sum_probs=38.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh-HHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD-YEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~-~~~l~~~~~~  344 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++ ++++.+++..
T Consensus         4 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~   51 (260)
T 1x1t_A            4 GKVAVVTGSTS--GIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAA   51 (260)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHh
Confidence            36799999998  9999999999999999998  77777 8888777643

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=95.14  E-value=0.029  Score=53.67  Aligned_cols=45  Identities=18%  Similarity=0.285  Sum_probs=37.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc----------------hhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC----------------KDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~----------------~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|+++  -||+++|+.|+++|.+|.+  |+                .++++++++++.
T Consensus        10 ~~k~~lVTGas~--gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (286)
T 3uve_A           10 EGKVAFVTGAAR--GQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK   72 (286)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHh
Confidence            357899999998  9999999999999999988  55                677777776643

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.14  E-value=0.017  Score=53.19  Aligned_cols=42  Identities=19%  Similarity=0.304  Sum_probs=36.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  342 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~  342 (474)
                      +.|+++|++|  -||+++|+.|+++|.+|.+   |++++.+++++++
T Consensus         2 k~vlITGasg--giG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~   46 (245)
T 2ph3_A            2 RKALITGASR--GIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEA   46 (245)
T ss_dssp             CEEEETTTTS--HHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            4799999998  9999999999999999887   6788888777664

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=95.14  E-value=0.006  Score=59.31  Aligned_cols=112  Identities=8%  Similarity=0.004  Sum_probs=61.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccC--cEEEecchhhHHHHHhhCccccccceeeecccccCce-eEEEEcCcCChh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMG--IKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKT-KIWLVGDDLTGK  373 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~--v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~-~vwivg~~i~~~  373 (474)
                      ...+|+|+||||  -||+++++.|.++|  ++|+.++..+...-.+.+.           ... ... ..++.||..+++
T Consensus        23 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~-----------~~~-~~~~~~~~~~Dl~d~~   88 (346)
T 4egb_A           23 NAMNILVTGGAG--FIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVK-----------SIQ-DHPNYYFVKGEIQNGE   88 (346)
T ss_dssp             -CEEEEEETTTS--HHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGT-----------TTT-TCTTEEEEECCTTCHH
T ss_pred             CCCeEEEECCcc--HHHHHHHHHHHhhCCCcEEEEEeccccccchhhhh-----------hhc-cCCCeEEEEcCCCCHH
Confidence            346899999999  99999999999999  7777732221000000000           000 112 236788988888


Q ss_pred             hhhcCCCCceeecccccCccCCCCCeeeecCCccccCC---CCccccccccccCcchhHHHHHhh
Q 011973          374 EQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPP---SLSNMHSCENWLGRRVMSAWRIAG  435 (474)
Q Consensus       374 eq~~a~~G~~f~~~~~v~p~~~R~dc~y~~~~am~vP~---~~~~~~~~e~~~prr~~~Ac~a~~  435 (474)
                      +...+-++             .+-|+.++-.+....+.   +.+.+...|..-....+.||...+
T Consensus        89 ~~~~~~~~-------------~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~  140 (346)
T 4egb_A           89 LLEHVIKE-------------RDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP  140 (346)
T ss_dssp             HHHHHHHH-------------HTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST
T ss_pred             HHHHHHhh-------------cCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC
Confidence            87655444             13466666555443332   222222233444556666666554

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=95.10  E-value=0.021  Score=54.99  Aligned_cols=32  Identities=3%  Similarity=0.000  Sum_probs=28.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  332 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~  332 (474)
                      ++|+|+||||  .||+++++.|.++|.+|..  |+.
T Consensus         5 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~   38 (321)
T 3c1o_A            5 EKIIIYGGTG--YIGKFMVRASLSFSHPTFIYARPL   38 (321)
T ss_dssp             CCEEEETTTS--TTHHHHHHHHHHTTCCEEEEECCC
T ss_pred             cEEEEEcCCc--hhHHHHHHHHHhCCCcEEEEECCc
Confidence            4699999999  9999999999999988887  664

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.07  E-value=0.028  Score=53.02  Aligned_cols=43  Identities=16%  Similarity=0.234  Sum_probs=37.5

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccC--cEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~--v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +.|+|+|+++  -||+++|+.|+++|  .+|.+  |+++++++++++++
T Consensus         3 k~~lVTGas~--GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~   49 (254)
T 3kzv_A            3 KVILVTGVSR--GIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG   49 (254)
T ss_dssp             CEEEECSTTS--HHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG
T ss_pred             CEEEEECCCc--hHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC
Confidence            5789999998  99999999999884  78877  89999999988764

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=95.07  E-value=0.018  Score=55.41  Aligned_cols=33  Identities=12%  Similarity=0.180  Sum_probs=29.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      ++|+|+||||  .||+++++.|.++|.+|..  |+.+
T Consensus        12 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~~   46 (318)
T 2r6j_A           12 SKILIFGGTG--YIGNHMVKGSLKLGHPTYVFTRPNS   46 (318)
T ss_dssp             CCEEEETTTS--TTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred             CeEEEECCCc--hHHHHHHHHHHHCCCcEEEEECCCC
Confidence            4699999999  9999999999999988877  6653

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=95.05  E-value=0.033  Score=54.40  Aligned_cols=45  Identities=11%  Similarity=0.199  Sum_probs=36.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch----hhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK----DDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~----~~~~~l~~~~~  343 (474)
                      ....|+|+|++|  -||+++++.|.++|.+|..  |+.    ++++.+++++.
T Consensus        26 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~   76 (352)
T 1sb8_A           26 QPKVWLITGVAG--FIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVS   76 (352)
T ss_dssp             SCCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSC
T ss_pred             cCCeEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcc
Confidence            346899999999  9999999999999999988  543    45667766554

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.04  E-value=0.021  Score=52.44  Aligned_cols=41  Identities=12%  Similarity=0.118  Sum_probs=36.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccC--cEEEe--cchhhHHHHHhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~--v~v~l--~~~~~~~~l~~~  341 (474)
                      +.|+|+|++|  -||+++|+.|.++|  .+|.+  |+.++.+++++.
T Consensus         4 k~vlItGasg--giG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~   48 (250)
T 1yo6_A            4 GSVVVTGANR--GIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI   48 (250)
T ss_dssp             SEEEESSCSS--HHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC
T ss_pred             CEEEEecCCc--hHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc
Confidence            5799999998  99999999999999  89988  888888888654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=95.03  E-value=0.033  Score=53.15  Aligned_cols=44  Identities=20%  Similarity=0.348  Sum_probs=36.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc------------hhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC------------KDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~------------~~~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+            .++++++.+++
T Consensus         9 ~~k~~lVTGas~--gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~   66 (281)
T 3s55_A            9 EGKTALITGGAR--GMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV   66 (281)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  65            55666665553

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=95.03  E-value=0.02  Score=54.00  Aligned_cols=40  Identities=15%  Similarity=0.096  Sum_probs=35.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+.+++
T Consensus         2 k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   43 (254)
T 1zmt_A            2 STAIVTNVKH--FGGMGSALRLSEAGHTVACHDESFKQKDELEA   43 (254)
T ss_dssp             CEEEESSTTS--TTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH
T ss_pred             eEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            4689999998  9999999999999999998  88887777654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.02  E-value=0.037  Score=57.64  Aligned_cols=90  Identities=11%  Similarity=0.095  Sum_probs=64.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc--------------ccceeeec-------
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA--------------QHNLVLST-------  354 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~--------------~~~l~~~t-------  354 (474)
                      .++|+++|+ |  .+|..+|+.|...|.+|++  ++.++++.+++. +...              +.+.-..+       
T Consensus       190 ~~kV~ViG~-G--~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~-G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~  265 (405)
T 4dio_A          190 AAKIFVMGA-G--VAGLQAIATARRLGAVVSATDVRPAAKEQVASL-GAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQ  265 (405)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHT-TCEECCCCC-----------------CHHHHHH
T ss_pred             CCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc-CCceeecccccccccccccchhhhcchhhhhhh
Confidence            579999999 5  9999999999999999998  888888888763 2211              00100011       


Q ss_pred             --ccc-c-CceeEEEEc---------CcCChhhhhcCCCCceeecccccCc
Q 011973          355 --SYA-A-HKTKIWLVG---------DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       355 --~~~-~-~~~~vwivg---------~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                        ++. . +.+||+|-.         ..++++..++|+||++++|++ +++
T Consensus       266 ~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA-~d~  315 (405)
T 4dio_A          266 AALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA-VER  315 (405)
T ss_dssp             HHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT-GGG
T ss_pred             HhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe-CCC
Confidence              222 2 677777622         348999999999999999999 554

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=94.99  E-value=0.016  Score=55.96  Aligned_cols=42  Identities=17%  Similarity=0.188  Sum_probs=33.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      .+.|+|+|++|  -||+++|+.|.++|.+|.+  |+.++.++..++
T Consensus         5 ~~~vlVTGatG--~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~   48 (341)
T 3enk_A            5 KGTILVTGGAG--YIGSHTAVELLAHGYDVVIADNLVNSKREAIAR   48 (341)
T ss_dssp             SCEEEEETTTS--HHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHH
T ss_pred             CcEEEEecCCc--HHHHHHHHHHHHCCCcEEEEecCCcchHHHHHH
Confidence            35899999999  9999999999999999988  655554444333

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=94.98  E-value=0.016  Score=54.27  Aligned_cols=42  Identities=19%  Similarity=0.344  Sum_probs=36.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+++++++++ ++
T Consensus         6 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~   49 (246)
T 2ag5_A            6 GKVIILTAAAQ--GIGQAAALAFAREGAKVIATDINESKLQELE-KY   49 (246)
T ss_dssp             TCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc
Confidence            46799999998  9999999999999999998  8888777665 44

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=94.98  E-value=0.014  Score=55.96  Aligned_cols=40  Identities=15%  Similarity=0.258  Sum_probs=35.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  339 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~  339 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.
T Consensus        16 ~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~   57 (266)
T 3p19_A           16 KKLVVITGASS--GIGEAIARRFSEEGHPLLLLARRVERLKALN   57 (266)
T ss_dssp             CCEEEEESTTS--HHHHHHHHHHHHTTCCEEEEESCHHHHHTTC
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHhh
Confidence            56899999998  9999999999999999999  8877766553

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=94.93  E-value=0.044  Score=47.74  Aligned_cols=42  Identities=26%  Similarity=0.355  Sum_probs=34.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~-~~~~~~l~~~~  342 (474)
                      ..+|+++|+ |  .+|+.+|+.|.+.|.+|++  ++ +++.+.+++..
T Consensus         3 ~~~vlI~G~-G--~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~   47 (153)
T 1id1_A            3 KDHFIVCGH-S--ILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL   47 (153)
T ss_dssp             CSCEEEECC-S--HHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH
T ss_pred             CCcEEEECC-C--HHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh
Confidence            457999997 7  9999999999999999998  65 56677776543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=94.93  E-value=0.037  Score=53.58  Aligned_cols=43  Identities=21%  Similarity=0.335  Sum_probs=34.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh-hHHHHHhh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD-DYEKLKLR  341 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~-~~~~l~~~  341 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.+ ..+.++++
T Consensus        46 ~gk~vlVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~   91 (291)
T 3ijr_A           46 KGKNVLITGGDS--GIGRAVSIAFAKEGANIAIAYLDEEGDANETKQY   91 (291)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH
Confidence            356899999998  9999999999999999988  6554 34444443

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=94.93  E-value=0.034  Score=52.77  Aligned_cols=43  Identities=16%  Similarity=0.258  Sum_probs=35.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR  341 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~  341 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+   ++.++.+++.++
T Consensus        24 ~~k~vlITGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~   69 (269)
T 3gk3_A           24 AKRVAFVTGGMG--GLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMH   69 (269)
T ss_dssp             CCCEEEETTTTS--HHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHH
T ss_pred             cCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH
Confidence            356789999998  9999999999999999988   555566655554

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=94.90  E-value=0.035  Score=52.95  Aligned_cols=45  Identities=16%  Similarity=0.206  Sum_probs=37.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-------------chhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-------------CKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-------------~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|+++  -||+++|+.|+++|.+|.+  |             +.++++++.+++.
T Consensus        10 ~~k~~lVTGas~--GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (277)
T 3tsc_A           10 EGRVAFITGAAR--GQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE   69 (277)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCcc--HHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  5             6777777766643

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=94.89  E-value=0.018  Score=54.60  Aligned_cols=37  Identities=5%  Similarity=0.029  Sum_probs=31.4

Q ss_pred             EEEEeccCCCchhHHHHHHHHhcc-CcEEEe--cchhhHHHH
Q 011973          300 HVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKL  338 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~-~v~v~l--~~~~~~~~l  338 (474)
                      +|+|+||||  .||+++++.|.++ |.+|..  |+.++.+.+
T Consensus         2 ~ilVtGatG--~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~   41 (289)
T 3e48_A            2 NIMLTGATG--HLGTHITNQAIANHIDHFHIGVRNVEKVPDD   41 (289)
T ss_dssp             CEEEETTTS--HHHHHHHHHHHHTTCTTEEEEESSGGGSCGG
T ss_pred             EEEEEcCCc--hHHHHHHHHHhhCCCCcEEEEECCHHHHHHh
Confidence            589999999  9999999999977 888887  887765544

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=94.87  E-value=0.025  Score=53.40  Aligned_cols=43  Identities=21%  Similarity=0.306  Sum_probs=36.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++ +++.+++.
T Consensus         6 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~   50 (256)
T 2d1y_A            6 GKGVLVTGGAR--GIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG   50 (256)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh
Confidence            46799999998  9999999999999999988  77777 77766654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=94.87  E-value=0.021  Score=54.30  Aligned_cols=31  Identities=19%  Similarity=0.210  Sum_probs=27.9

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC  331 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~  331 (474)
                      ++|+|+||||  .||+++++.|.++|.+|..  |+
T Consensus         5 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~   37 (308)
T 1qyc_A            5 SRILLIGATG--YIGRHVAKASLDLGHPTFLLVRE   37 (308)
T ss_dssp             CCEEEESTTS--TTHHHHHHHHHHTTCCEEEECCC
T ss_pred             CEEEEEcCCc--HHHHHHHHHHHhCCCCEEEEECC
Confidence            5699999999  9999999999999988877  65

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=94.85  E-value=0.038  Score=53.08  Aligned_cols=44  Identities=16%  Similarity=0.231  Sum_probs=35.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+ .+.++.+++.+++
T Consensus        30 ~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~   74 (273)
T 3uf0_A           30 AGRTAVVTGAGS--GIGRAIAHGYARAGAHVLAWGRTDGVKEVADEI   74 (273)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHH
Confidence            467899999998  9999999999999999998 3345566665554

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=94.84  E-value=0.031  Score=53.47  Aligned_cols=46  Identities=22%  Similarity=0.382  Sum_probs=37.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch--hhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~--~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|++-||+++|+.|+++|.+|.+  |+.  +.+++++++.+
T Consensus        26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~   75 (280)
T 3nrc_A           26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFN   75 (280)
T ss_dssp             TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGC
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcC
Confidence            57899999996235999999999999999998  666  67777776644

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=94.84  E-value=0.031  Score=45.37  Aligned_cols=39  Identities=15%  Similarity=0.129  Sum_probs=34.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHHHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLK  339 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~l~  339 (474)
                      ..+|+++|+ |  .+|+++++.|.+.| .+|.+  |++++.+.++
T Consensus         5 ~~~v~I~G~-G--~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~   46 (118)
T 3ic5_A            5 RWNICVVGA-G--KIGQMIAALLKTSSNYSVTVADHDLAALAVLN   46 (118)
T ss_dssp             CEEEEEECC-S--HHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred             cCeEEEECC-C--HHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Confidence            357999999 9  99999999999999 88877  8888888776

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=94.79  E-value=0.026  Score=50.57  Aligned_cols=41  Identities=17%  Similarity=0.176  Sum_probs=35.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +.|+++|++|  -||+++|+.|+++  +|.+  |++++++++.+++.
T Consensus         1 k~vlVtGasg--~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~   43 (207)
T 2yut_A            1 MRVLITGATG--GLGGAFARALKGH--DLLLSGRRAGALAELAREVG   43 (207)
T ss_dssp             CEEEEETTTS--HHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT
T ss_pred             CEEEEEcCCc--HHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc
Confidence            3689999998  9999999999987  7777  88889988887754

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=94.78  E-value=0.058  Score=50.59  Aligned_cols=38  Identities=16%  Similarity=0.303  Sum_probs=33.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch-hhHHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEK  337 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~-~~~~~  337 (474)
                      .+.|+|+|++|  -||+++|+.|.++|.+|.+  |++ +++++
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~   47 (249)
T 2ew8_A            7 DKLAVITGGAN--GIGRAIAERFAVEGADIAIADLVPAPEAEA   47 (249)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCCHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCCchhHHHH
Confidence            46799999998  9999999999999999988  776 66654

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=94.74  E-value=0.035  Score=55.33  Aligned_cols=82  Identities=20%  Similarity=0.245  Sum_probs=57.4

Q ss_pred             HHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc
Q 011973          286 AAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  358 (474)
Q Consensus       286 taAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~  358 (474)
                      |++.+++-+.     -.-++|+|+|+.+  -+|+.+|+.|.++|..|++  ++.+.++                    +.
T Consensus       143 Tp~gv~~lL~~~~i~l~Gk~vvVvGrs~--iVG~p~A~lL~~~gAtVtv~h~~t~~L~--------------------~~  200 (285)
T 3p2o_A          143 TPLGVMKLLKAYEIDLEGKDAVIIGASN--IVGRPMATMLLNAGATVSVCHIKTKDLS--------------------LY  200 (285)
T ss_dssp             HHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTCSCHH--------------------HH
T ss_pred             CHHHHHHHHHHhCCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCchhHH--------------------HH
Confidence            5666655543     3578999999997  7999999999999999999  2221111                    11


Q ss_pred             -CceeEEEE--c--CcCChhhhhcCCCCceeecccccCcc
Q 011973          359 -HKTKIWLV--G--DDLTGKEQARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       359 -~~~~vwiv--g--~~i~~~eq~~a~~G~~f~~~~~v~p~  393 (474)
                       +.+||+|.  |  +.++++..   ++|+++||+. +++.
T Consensus       201 ~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDVg-i~~~  236 (285)
T 3p2o_A          201 TRQADLIIVAAGCVNLLRSDMV---KEGVIVVDVG-INRL  236 (285)
T ss_dssp             HTTCSEEEECSSCTTCBCGGGS---CTTEEEEECC-CEEC
T ss_pred             hhcCCEEEECCCCCCcCCHHHc---CCCeEEEEec-cCcc
Confidence             45666663  2  24565544   9999999998 6664

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=94.72  E-value=0.034  Score=53.57  Aligned_cols=35  Identities=17%  Similarity=0.252  Sum_probs=31.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      ..+.|+|+|+++  -||+++|+.|+++|.+|.+  |+.+
T Consensus         8 ~~k~vlVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~   44 (285)
T 3sc4_A            8 RGKTMFISGGSR--GIGLAIAKRVAADGANVALVAKSAE   44 (285)
T ss_dssp             TTCEEEEESCSS--HHHHHHHHHHHTTTCEEEEEESCCS
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECChh
Confidence            456899999998  9999999999999999998  7766

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=94.72  E-value=0.015  Score=53.50  Aligned_cols=37  Identities=16%  Similarity=0.305  Sum_probs=31.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYE  336 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~  336 (474)
                      .+.|+|+|++|  -||+++|+.|.++|.  +|.+  |+.++++
T Consensus        18 ~~~vlVtGasg--~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~   58 (242)
T 2bka_A           18 NKSVFILGASG--ETGRVLLKEILEQGLFSKVTLIGRRKLTFD   58 (242)
T ss_dssp             CCEEEEECTTS--HHHHHHHHHHHHHTCCSEEEEEESSCCCCC
T ss_pred             CCeEEEECCCc--HHHHHHHHHHHcCCCCCEEEEEEcCCCCcc
Confidence            46799999999  999999999999999  8888  7766544

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=94.69  E-value=0.042  Score=53.30  Aligned_cols=45  Identities=16%  Similarity=0.330  Sum_probs=37.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc------------hhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC------------KDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~------------~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|+++  -||+++|+.|+++|.+|.+  |+            .++++++.+++.
T Consensus        27 ~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (299)
T 3t7c_A           27 EGKVAFITGAAR--GQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE   85 (299)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  54            677777766643

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=94.69  E-value=0.052  Score=54.75  Aligned_cols=88  Identities=15%  Similarity=0.211  Sum_probs=62.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--ccc-c-CceeEEE--EcC--
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYA-A-HKTKIWL--VGD--  368 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~~-~-~~~~vwi--vg~--  368 (474)
                      ++|+|+|+ |  -+|+++++.|.+.|.+|++  |+.++++.+++......  ..+..+  +.. . +.++++|  +|-  
T Consensus       168 ~~VlViGa-G--gvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~DvVI~~~~~~~  242 (361)
T 1pjc_A          168 GKVVILGG-G--VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRV--ELLYSNSAEIETAVAEADLLIGAVLVPG  242 (361)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGS--EEEECCHHHHHHHHHTCSEEEECCCCTT
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCcee--EeeeCCHHHHHHHHcCCCEEEECCCcCC
Confidence            78999999 7  8999999999999999888  88899998876532221  111111  222 2 4567777  321  


Q ss_pred             c-----CChhhhhcCCCCceeecccccCc
Q 011973          369 D-----LTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       369 ~-----i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                      .     ++.+....+++|.++++++ .++
T Consensus       243 ~~~~~li~~~~~~~~~~g~~ivdv~-~~~  270 (361)
T 1pjc_A          243 RRAPILVPASLVEQMRTGSVIVDVA-VDQ  270 (361)
T ss_dssp             SSCCCCBCHHHHTTSCTTCEEEETT-CTT
T ss_pred             CCCCeecCHHHHhhCCCCCEEEEEe-cCC
Confidence            1     3566677889999999998 444

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=94.68  E-value=0.026  Score=53.44  Aligned_cols=50  Identities=20%  Similarity=0.147  Sum_probs=40.4

Q ss_pred             HhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          291 VNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       291 l~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      .+..+-..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++++++
T Consensus        27 ~~~~~l~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~   78 (279)
T 3ctm_A           27 LDLFSLKGKVASVTGSSG--GIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQ   78 (279)
T ss_dssp             GGGGCCTTCEEEETTTTS--SHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            333344567899999998  9999999999999999998  7777777776654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=94.66  E-value=0.028  Score=52.32  Aligned_cols=44  Identities=25%  Similarity=0.284  Sum_probs=37.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~  343 (474)
                      .+.|+++|+++  -||+++|+.|+++|.+|.+   |++++.+++.+++.
T Consensus         7 ~k~vlITGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~   53 (255)
T 3icc_A            7 GKVALVTGASR--GIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQ   53 (255)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHH
Confidence            46799999998  9999999999999999977   67778887777654

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=94.64  E-value=0.037  Score=55.15  Aligned_cols=82  Identities=20%  Similarity=0.221  Sum_probs=57.5

Q ss_pred             hHHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc
Q 011973          285 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA  357 (474)
Q Consensus       285 ltaAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~  357 (474)
                      -|++.+++-+.     -.-++|+|+|+.+  -+|+.+|+.|.++|..|++  ++.+                     +++
T Consensus       143 cTp~gv~~lL~~~~i~l~Gk~vvVIG~s~--iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~L~  199 (285)
T 3l07_A          143 CTPKGIMTMLREYGIKTEGAYAVVVGASN--VVGKPVSQLLLNAKATVTTCHRFTT---------------------DLK  199 (285)
T ss_dssp             HHHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTCS---------------------SHH
T ss_pred             CCHHHHHHHHHHhCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCeEEEEeCCch---------------------hHH
Confidence            35556555443     3578999999997  7999999999999999999  2221                     112


Q ss_pred             c--CceeEEEE--c--CcCChhhhhcCCCCceeecccccCcc
Q 011973          358 A--HKTKIWLV--G--DDLTGKEQARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       358 ~--~~~~vwiv--g--~~i~~~eq~~a~~G~~f~~~~~v~p~  393 (474)
                      +  +++||+|.  |  +.++++..   ++|+++||+. +++.
T Consensus       200 ~~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDvg-i~~~  237 (285)
T 3l07_A          200 SHTTKADILIVAVGKPNFITADMV---KEGAVVIDVG-INHV  237 (285)
T ss_dssp             HHHTTCSEEEECCCCTTCBCGGGS---CTTCEEEECC-CEEE
T ss_pred             HhcccCCEEEECCCCCCCCCHHHc---CCCcEEEEec-ccCc
Confidence            1  46666662  3  34565544   9999999999 6664

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=94.59  E-value=0.089  Score=52.15  Aligned_cols=91  Identities=19%  Similarity=0.240  Sum_probs=62.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc-CceeEEE--EcCcCCh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWL--VGDDLTG  372 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-~~~~vwi--vg~~i~~  372 (474)
                      .++|.++|+-   -+|+.+|+.|+ .|.+|++  ++++..+++++.+..+.-..+.-.+++++ ++++++|  +-+..+-
T Consensus        12 ~~~V~vIG~G---~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~aDlVieavpe~~~v   87 (293)
T 1zej_A           12 HMKVFVIGAG---LMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEKVKDCDIVMEAVFEDLNT   87 (293)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTTGGGCSEEEECCCSCHHH
T ss_pred             CCeEEEEeeC---HHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHHHcCCCEEEEcCcCCHHH
Confidence            5789999985   89999999999 9999999  88999998888743322122222335554 7787776  3222211


Q ss_pred             h-----hhhcCCCCceee-cccccCcc
Q 011973          373 K-----EQARAPKGTIFI-PYTQIPPR  393 (474)
Q Consensus       373 ~-----eq~~a~~G~~f~-~~~~v~p~  393 (474)
                      +     ++..+ +|++++ ..|-+++.
T Consensus        88 k~~l~~~l~~~-~~~IlasntSti~~~  113 (293)
T 1zej_A           88 KVEVLREVERL-TNAPLCSNTSVISVD  113 (293)
T ss_dssp             HHHHHHHHHTT-CCSCEEECCSSSCHH
T ss_pred             HHHHHHHHhcC-CCCEEEEECCCcCHH
Confidence            1     23455 898885 66667777

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=94.59  E-value=0.032  Score=52.50  Aligned_cols=39  Identities=10%  Similarity=0.136  Sum_probs=33.6

Q ss_pred             EEEEeccCCCchhHHHHHHHHhcc--CcEEEe--cchhhHHHHHh
Q 011973          300 HVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~--~v~v~l--~~~~~~~~l~~  340 (474)
                      +|+|+|+||  -||+++++.|.++  |.+|..  |+.++.+.+..
T Consensus         2 ~ilVtGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~   44 (287)
T 2jl1_A            2 SIAVTGATG--QLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD   44 (287)
T ss_dssp             CEEETTTTS--HHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH
T ss_pred             eEEEEcCCc--hHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh
Confidence            589999999  9999999999988  888887  87777776653

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=94.56  E-value=0.043  Score=52.41  Aligned_cols=36  Identities=17%  Similarity=0.198  Sum_probs=31.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      ..+.|+|+|+++  -||+++|+.|+++|.+|.+  |+.++
T Consensus         5 ~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~   42 (274)
T 3e03_A            5 SGKTLFITGASR--GIGLAIALRAARDGANVAIAAKSAVA   42 (274)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCCSC
T ss_pred             CCcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeccchh
Confidence            457899999998  9999999999999999998  76654

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=94.54  E-value=0.069  Score=53.22  Aligned_cols=83  Identities=18%  Similarity=0.203  Sum_probs=56.5

Q ss_pred             HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc
Q 011973          286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  358 (474)
Q Consensus       286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~  358 (474)
                      |+..+++-+     +-.-++|+|+|+.+  -+|+.+|+.|.++|..|++  ++.+.+++.            +       
T Consensus       144 Tp~gv~~lL~~~~i~l~Gk~vvVvGrs~--iVG~plA~lL~~~gAtVtv~hs~T~~L~~~------------~-------  202 (286)
T 4a5o_A          144 TPKGIMTLLASTGADLYGMDAVVVGASN--IVGRPMALELLLGGCTVTVTHRFTRDLADH------------V-------  202 (286)
T ss_dssp             HHHHHHHHHHHTTCCCTTCEEEEECTTS--TTHHHHHHHHHHTTCEEEEECTTCSCHHHH------------H-------
T ss_pred             CHHHHHHHHHHhCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCeEEEEeCCCcCHHHH------------h-------
Confidence            555555544     33578999999997  8999999999999999999  222211110            0       


Q ss_pred             CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc
Q 011973          359 HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       359 ~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~  393 (474)
                      +.++|+|  +|  +.++++..   ++|+++||+. +++.
T Consensus       203 ~~ADIVI~Avg~p~~I~~~~v---k~GavVIDvg-i~~~  237 (286)
T 4a5o_A          203 SRADLVVVAAGKPGLVKGEWI---KEGAIVIDVG-INRQ  237 (286)
T ss_dssp             HTCSEEEECCCCTTCBCGGGS---CTTCEEEECC-SCSS
T ss_pred             ccCCEEEECCCCCCCCCHHHc---CCCeEEEEec-cccc
Confidence            3556666  23  24555544   9999999999 6664

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=94.54  E-value=0.11  Score=52.59  Aligned_cols=67  Identities=16%  Similarity=0.263  Sum_probs=46.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccc----cccceeeeccccc-CceeEEEE
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVE----AQHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~----~~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      ...+|.++|| |  .||+++|..|+.+|.  .+.|  +++++.+....++...    ....++..++|++ ++++++|+
T Consensus        18 ~~~kV~ViGa-G--~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~~~~aDiVvi   93 (331)
T 4aj2_A           18 PQNKITVVGV-G--AVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSVTANSKLVII   93 (331)
T ss_dssp             CSSEEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGGGTTEEEEEE
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHHHhCCCCEEEE
Confidence            4679999998 7  999999999998887  7777  6777777644443321    1122233346666 89998776

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=94.52  E-value=0.03  Score=54.77  Aligned_cols=33  Identities=15%  Similarity=0.071  Sum_probs=29.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  332 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~  332 (474)
                      ..+|+|+||||  .||+++++.|.++|.+|..  |+.
T Consensus        10 ~~~IlVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~   44 (346)
T 3i6i_A           10 KGRVLIAGATG--FIGQFVATASLDAHRPTYILARPG   44 (346)
T ss_dssp             -CCEEEECTTS--HHHHHHHHHHHHTTCCEEEEECSS
T ss_pred             CCeEEEECCCc--HHHHHHHHHHHHCCCCEEEEECCC
Confidence            45799999999  9999999999999988888  655

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=94.46  E-value=0.039  Score=52.00  Aligned_cols=38  Identities=24%  Similarity=0.243  Sum_probs=32.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHH
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  336 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~  336 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+++..+
T Consensus        18 ~~k~vlVTGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~   57 (249)
T 1o5i_A           18 RDKGVLVLAASR--GIGRAVADVLSQEGAEVTICARNEELLK   57 (249)
T ss_dssp             TTCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence            467899999998  9999999999999999998  7665443

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=94.46  E-value=0.036  Score=54.29  Aligned_cols=46  Identities=17%  Similarity=0.185  Sum_probs=38.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc----------hhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC----------KDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~----------~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+          .++.+++.+++..
T Consensus        26 ~gk~vlVTGas~--GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~   83 (322)
T 3qlj_A           26 DGRVVIVTGAGG--GIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA   83 (322)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHh
Confidence            356899999998  9999999999999999998  65          6778887777543

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=94.45  E-value=0.1  Score=54.89  Aligned_cols=149  Identities=15%  Similarity=0.115  Sum_probs=95.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE--c--C
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV--G--D  368 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv--g--~  368 (474)
                      ..++|.|+|.-   .||+++|+.|...|.+|+.  ++..+..  +.. ..+.     .+.+++ . +.+++++.  |  .
T Consensus       219 ~GktV~ViG~G---~IGk~vA~~Lra~Ga~Viv~D~dp~ra~--~A~-~~G~-----~v~~Leeal~~ADIVi~atgt~~  287 (435)
T 3gvp_A          219 GGKQVVVCGYG---EVGKGCCAALKAMGSIVYVTEIDPICAL--QAC-MDGF-----RLVKLNEVIRQVDIVITCTGNKN  287 (435)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHH--HHH-HTTC-----EECCHHHHTTTCSEEEECSSCSC
T ss_pred             cCCEEEEEeeC---HHHHHHHHHHHHCCCEEEEEeCChhhhH--HHH-HcCC-----EeccHHHHHhcCCEEEECCCCcc
Confidence            56799999985   9999999999999999998  4443332  221 1111     122443 2 56666552  2  4


Q ss_pred             cCChhhhhcCCCCceeecccccCcc----CCCC-Cee----------e--ecCCccc-cCC-CCccccccccccCcchhH
Q 011973          369 DLTGKEQARAPKGTIFIPYTQIPPR----KLRK-DCF----------Y--HSTPAMI-IPP-SLSNMHSCENWLGRRVMS  429 (474)
Q Consensus       369 ~i~~~eq~~a~~G~~f~~~~~v~p~----~~R~-dc~----------y--~~~~am~-vP~-~~~~~~~~e~~~prr~~~  429 (474)
                      .|+.+....|++|+++|.+++.+++    .++. ...          |  +.+-.+. +.+ -+-|+. |- +.|..+|+
T Consensus       288 lI~~e~l~~MK~gailINvgrg~~EId~~~L~~~~~~~~~ir~~v~~y~~~dg~~I~LLAeGrLvNl~-~~-~hp~~vm~  365 (435)
T 3gvp_A          288 VVTREHLDRMKNSCIVCNMGHSNTEIDVASLRTPELTWERVRSQVDHVIWPDGKRIVLLAEGRLLNLS-CS-TVPTFVLS  365 (435)
T ss_dssp             SBCHHHHHHSCTTEEEEECSSTTTTBTGGGGCSTTCEEEEEETTEEEEECTTSCEEEEEGGGSBHHHH-HC-CCCHHHHH
T ss_pred             cCCHHHHHhcCCCcEEEEecCCCccCCHHHHHhhcceeEEEEcCeeeEEcCCCcEEEEecCCCEeeec-CC-CCcHHHHh
Confidence            6888999999999999999985543    3321 111          1  1111211 222 354676 66 59999999


Q ss_pred             HHHHhhhhhhhcCCCCC--ccch-h---hhhHHHH
Q 011973          430 AWRIAGIIHALEGWDLN--ECGQ-T---MCDIHQV  458 (474)
Q Consensus       430 Ac~a~~~v~alEgw~~~--e~G~-i---v~~id~i  458 (474)
                      -.++--.+-..|=|.++  .... +   .+++|+-
T Consensus       366 ~sf~~q~la~~~l~~~~~~~~~~~v~~lp~~~d~~  400 (435)
T 3gvp_A          366 ITATTQALALIELYNAPEGRYKQDVYLLPKKMDEY  400 (435)
T ss_dssp             HHHHHHHHHHHHHHHCCTTTSCSSEEECCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCcccccCCCeeeCCHHHHHH
Confidence            99998888888877663  3333 2   3777653

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=94.44  E-value=0.046  Score=51.22  Aligned_cols=44  Identities=18%  Similarity=0.310  Sum_probs=34.8

Q ss_pred             CCcEEEEeccC--CCchhHHHHHHHHhccCcEEEe--cch---hhHHHHHhhC
Q 011973          297 TTAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gat--g~~kig~ava~~L~~~~v~v~l--~~~---~~~~~l~~~~  342 (474)
                      ..+.|+|+|++  |  -||+++|+.|+++|.+|.+  |+.   +.++++.++.
T Consensus        13 ~~k~vlITGa~~~~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~   63 (271)
T 3ek2_A           13 DGKRILLTGLLSNR--SIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF   63 (271)
T ss_dssp             TTCEEEECCCCSTT--SHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCCC--cHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc
Confidence            57899999998  6  8999999999999999998  553   3444444443

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=94.44  E-value=0.063  Score=53.86  Aligned_cols=82  Identities=17%  Similarity=0.164  Sum_probs=58.5

Q ss_pred             hHHHHHHhcCcC-----CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc
Q 011973          285 LAAAVVVNSLPK-----TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA  357 (474)
Q Consensus       285 ltaAvvl~~ip~-----~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~  357 (474)
                      -|+..+++-+..     ..++|+|+|+.+  -||+-+|+.|.++|-.|++  ++.+                     +++
T Consensus       147 cTp~gi~~ll~~~~i~l~gk~vvVIG~s~--iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~L~  203 (301)
T 1a4i_A          147 CTPKGCLELIKETGVPIAGRHAVVVGRSK--IVGAPMHDLLLWNNATVTTCHSKTA---------------------HLD  203 (301)
T ss_dssp             HHHHHHHHHHHTTTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTCS---------------------SHH
T ss_pred             chHHHHHHHHHHcCCCCCCCEEEEECCCc--hHHHHHHHHHHhCCCeEEEEECCcc---------------------cHH
Confidence            477777775543     578999999996  7999999999999999999  2111                     122


Q ss_pred             c--CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc
Q 011973          358 A--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       358 ~--~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~  393 (474)
                      +  +.++++|  +|  +.++++..   ++|+++||++ +++.
T Consensus       204 ~~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDVg-i~~~  241 (301)
T 1a4i_A          204 EEVNKGDILVVATGQPEMVKGEWI---KPGAIVIDCG-INYV  241 (301)
T ss_dssp             HHHTTCSEEEECCCCTTCBCGGGS---CTTCEEEECC-CBC-
T ss_pred             HHhccCCEEEECCCCcccCCHHHc---CCCcEEEEcc-CCCc
Confidence            1  4566666  22  24555554   8999999999 7663

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=94.40  E-value=0.032  Score=52.31  Aligned_cols=40  Identities=13%  Similarity=0.224  Sum_probs=34.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccC---cEEEe--cchhhHHHHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMG---IKVAT--ICKDDYEKLK  339 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~---v~v~l--~~~~~~~~l~  339 (474)
                      .+.|+|+|++|  -||+++|+.|.++|   .+|.+  |+.++.+.++
T Consensus        21 ~k~vlITGasg--gIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~   65 (267)
T 1sny_A           21 MNSILITGCNR--GLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE   65 (267)
T ss_dssp             CSEEEESCCSS--HHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHH
Confidence            46899999998  99999999999999   89988  7777665553

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=94.40  E-value=0.037  Score=47.23  Aligned_cols=41  Identities=20%  Similarity=0.225  Sum_probs=35.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      .++|+++|+ |  .+|+++|+.|.++|.+|++  +++++.+.++++
T Consensus         6 ~~~v~I~G~-G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~   48 (141)
T 3llv_A            6 RYEYIVIGS-E--AAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE   48 (141)
T ss_dssp             CCSEEEECC-S--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC
Confidence            357999998 6  8999999999999999999  888888888754

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=94.36  E-value=0.041  Score=52.47  Aligned_cols=36  Identities=22%  Similarity=0.199  Sum_probs=30.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDY  335 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~  335 (474)
                      .+.|+|+||||  .||+++++.|.++| .+|..  |+.++.
T Consensus         5 ~~~ilVtGatG--~iG~~l~~~L~~~g~~~V~~~~R~~~~~   43 (299)
T 2wm3_A            5 KKLVVVFGGTG--AQGGSVARTLLEDGTFKVRVVTRNPRKK   43 (299)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHHCSSEEEEEESCTTSH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHhcCCceEEEEEcCCCCH
Confidence            36899999999  99999999999988 88877  766543

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=94.35  E-value=0.032  Score=58.03  Aligned_cols=126  Identities=15%  Similarity=0.198  Sum_probs=81.9

Q ss_pred             HHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cc------h-hhHHHHHhhCccccccce
Q 011973          286 AAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC------K-DDYEKLKLRIPVEAQHNL  350 (474)
Q Consensus       286 taAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~------~-~~~~~l~~~~~~~~~~~l  350 (474)
                      +.|.++|+.+     -...+|++.||-   ..|.+||+.|...|. +|.|  ++      + +++..+|+++.+..... 
T Consensus       171 ~lAall~al~l~g~~l~d~kVVi~GAG---aAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~-  246 (398)
T 2a9f_A          171 VLAAIFNSLKLLKKSLDEVSIVVNGGG---SAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNRE-  246 (398)
T ss_dssp             HHHHHHHHHHTTTCCTTSCEEEEECCS---HHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCT-
T ss_pred             HHHHHHHHHHHhCCCCCccEEEEECCC---HHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcc-
Confidence            3445555443     257799999998   899999999999999 8888  32      1 34666666644432111 


Q ss_pred             eeecccc-c-CceeEEE---EcCcCChhhhhcCCCCceeecccc----cCcc---CCCCCeeeecCCccccCCCCcccc
Q 011973          351 VLSTSYA-A-HKTKIWL---VGDDLTGKEQARAPKGTIFIPYTQ----IPPR---KLRKDCFYHSTPAMIIPPSLSNMH  417 (474)
Q Consensus       351 ~~~t~~~-~-~~~~vwi---vg~~i~~~eq~~a~~G~~f~~~~~----v~p~---~~R~dc~y~~~~am~vP~~~~~~~  417 (474)
                      -...++. + +.++|.|   .+..+++|..++|.+|.++.|.|.    ..|+   +. ..|++.++ -...|+..+|+.
T Consensus       247 ~~~~~L~eav~~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNPt~E~~pe~a~~~-g~~i~atG-rs~~p~Q~NN~~  323 (398)
T 2a9f_A          247 FKSGTLEDALEGADIFIGVSAPGVLKAEWISKMAARPVIFAMANPIPEIYPDEALEA-GAYIVGTG-RSDFPNQINNVL  323 (398)
T ss_dssp             TCCCSCSHHHHTTCSEEECCSTTCCCHHHHHTSCSSCEEEECCSSSCSSCHHHHHTT-TCSEEEES-CTTSSSBCCGGG
T ss_pred             cchhhHHHHhccCCEEEecCCCCCCCHHHHHhhCCCCEEEECCCCCccCCHHHHHHh-CCeEEEeC-CCCCCCcCCcee
Confidence            0122454 3 6667766   568899999999999999999996    3333   33 23666555 345666666654

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=94.30  E-value=0.046  Score=51.87  Aligned_cols=45  Identities=16%  Similarity=0.279  Sum_probs=37.6

Q ss_pred             CcEEEEecc--CCCchhHHHHHHHHhccCcEEEe--cchhh-HHHHHhhCcc
Q 011973          298 TAHVLLRGT--VTANKVANAVASSLCQMGIKVAT--ICKDD-YEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Ga--tg~~kig~ava~~L~~~~v~v~l--~~~~~-~~~l~~~~~~  344 (474)
                      .+.|+|+|+  +|  -||+++|+.|+++|.+|.+  |+.++ +++++++++.
T Consensus         7 ~k~vlVTGa~~s~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~   56 (269)
T 2h7i_A            7 GKRILVSGIITDS--SIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPA   56 (269)
T ss_dssp             TCEEEECCCSSTT--SHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSS
T ss_pred             CCEEEEECCCCCC--chHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCC
Confidence            467999998  66  8999999999999999998  77665 5888877643

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=94.26  E-value=0.045  Score=51.22  Aligned_cols=42  Identities=14%  Similarity=0.100  Sum_probs=36.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe-----cchhhHHHHHhhC
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT-----ICKDDYEKLKLRI  342 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-----~~~~~~~~l~~~~  342 (474)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+     |++++++++++++
T Consensus         2 k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~   48 (244)
T 1zmo_A            2 VIALVTHARH--FAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN   48 (244)
T ss_dssp             CEEEESSTTS--TTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh
Confidence            5789999998  9999999999999999986     4567788887776

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=94.25  E-value=0.055  Score=52.48  Aligned_cols=44  Identities=16%  Similarity=0.293  Sum_probs=34.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      ..+.|+|+|++|+.-||+++|+.|+++|.+|.+  |+++..+.+++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~   74 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDP   74 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Confidence            357899999984346999999999999999998  76654444443

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=94.24  E-value=0.054  Score=51.77  Aligned_cols=44  Identities=20%  Similarity=0.210  Sum_probs=35.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh-hHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD-DYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~-~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|+.|.++|.+|.+  |+.+ ..+.+++++
T Consensus        28 ~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   74 (283)
T 1g0o_A           28 EGKVALVTGAGR--GIGREMAMELGRRGCKVIVNYANSTESAEEVVAAI   74 (283)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHH
Confidence            356899999998  9999999999999999988  6654 355555443

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=94.24  E-value=0.053  Score=53.20  Aligned_cols=44  Identities=14%  Similarity=0.288  Sum_probs=36.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc------------hhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC------------KDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~------------~~~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+            .++++++.+++
T Consensus        45 ~gk~~lVTGas~--GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (317)
T 3oec_A           45 QGKVAFITGAAR--GQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV  102 (317)
T ss_dssp             TTCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  43            56666665554

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=94.23  E-value=0.051  Score=54.50  Aligned_cols=36  Identities=14%  Similarity=0.253  Sum_probs=32.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      ..+.|+|+|+++  -||+++|+.|+++|.+|.+  |+.++
T Consensus        44 ~gk~vlVTGas~--GIG~aia~~La~~Ga~Vvl~~r~~~~   81 (346)
T 3kvo_A           44 AGCTVFITGASR--GIGKAIALKAAKDGANIVIAAKTAQP   81 (346)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHTTTCEEEEEESCCSC
T ss_pred             CCCEEEEeCCCh--HHHHHHHHHHHHCCCEEEEEECChhh
Confidence            457899999998  9999999999999999999  77664

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=94.23  E-value=0.051  Score=50.67  Aligned_cols=40  Identities=10%  Similarity=0.094  Sum_probs=34.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      .+.|+|+|++|  -||+++|+.|++ |.+|.+  |+.++++++++
T Consensus         5 ~k~vlITGas~--gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~   46 (245)
T 3e9n_A            5 KKIAVVTGATG--GMGIEIVKDLSR-DHIVYALGRNPEHLAALAE   46 (245)
T ss_dssp             -CEEEEESTTS--HHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT
T ss_pred             CCEEEEEcCCC--HHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh
Confidence            46799999998  999999999998 888887  88888888876

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=94.22  E-value=0.042  Score=50.24  Aligned_cols=39  Identities=18%  Similarity=0.167  Sum_probs=33.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhcc--CcEEEe--cchhhHHHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKL  338 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~--~v~v~l--~~~~~~~~l  338 (474)
                      .+.|+|+|++|  -||+++++.|.++  |.+|.+  |++++.+.+
T Consensus         4 ~~~ilVtGasG--~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~   46 (253)
T 1xq6_A            4 LPTVLVTGASG--RTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI   46 (253)
T ss_dssp             CCEEEEESTTS--HHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT
T ss_pred             CCEEEEEcCCc--HHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc
Confidence            46799999999  9999999999988  899988  877766554

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=94.22  E-value=0.04  Score=48.86  Aligned_cols=35  Identities=11%  Similarity=0.136  Sum_probs=31.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhH
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  335 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~  335 (474)
                      ++|+++|++|  -||+++++.|.++|.+|..  |++++.
T Consensus         4 ~~ilVtGatG--~iG~~l~~~l~~~g~~V~~~~r~~~~~   40 (206)
T 1hdo_A            4 KKIAIFGATG--QTGLTTLAQAVQAGYEVTVLVRDSSRL   40 (206)
T ss_dssp             CEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCGGGS
T ss_pred             CEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEEeChhhc
Confidence            5799999999  9999999999999999988  776654

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=94.19  E-value=0.099  Score=50.89  Aligned_cols=103  Identities=15%  Similarity=0.074  Sum_probs=67.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--EcCc-
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VGDD-  369 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg~~-  369 (474)
                      ...+|.++|. |  .+|+++|+.|.+.|.+|++  |++++.+.+++.   +.  . ...++.+ . ++++++|  +.+. 
T Consensus         6 ~~~~I~iIG~-G--~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~---g~--~-~~~~~~~e~~~~aDvvi~~vp~~~   76 (303)
T 3g0o_A            6 TDFHVGIVGL-G--SMGMGAARSCLRAGLSTWGADLNPQACANLLAE---GA--C-GAAASAREFAGVVDALVILVVNAA   76 (303)
T ss_dssp             -CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT---TC--S-EEESSSTTTTTTCSEEEECCSSHH
T ss_pred             CCCeEEEECC-C--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc---CC--c-cccCCHHHHHhcCCEEEEECCCHH
Confidence            3468999996 5  9999999999999999999  889999988775   11  1 1133554 3 6777755  2221 


Q ss_pred             -CCh-----hh-hhcCCCCceeecccccCcc---C----C-CCCeeeecCCccc
Q 011973          370 -LTG-----KE-QARAPKGTIFIPYTQIPPR---K----L-RKDCFYHSTPAMI  408 (474)
Q Consensus       370 -i~~-----~e-q~~a~~G~~f~~~~~v~p~---~----~-R~dc~y~~~~am~  408 (474)
                       ++.     ++ ...+++|+++++.|.++|.   +    + ++.+.|...|.+.
T Consensus        77 ~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g  130 (303)
T 3g0o_A           77 QVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDAPVSG  130 (303)
T ss_dssp             HHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEES
T ss_pred             HHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEeCCCCC
Confidence             111     11 1246899999999988775   1    1 1456666666543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=94.18  E-value=0.057  Score=51.43  Aligned_cols=43  Identities=16%  Similarity=0.237  Sum_probs=34.9

Q ss_pred             CcEEEEeccC--CCchhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhC
Q 011973          298 TAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gat--g~~kig~ava~~L~~~~v~v~l--~~~~---~~~~l~~~~  342 (474)
                      .+.|+|+|++  |  -||+++|+.|+++|.+|.+  |+.+   ..++++++.
T Consensus         6 ~k~vlVTGas~~~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~   55 (275)
T 2pd4_A            6 GKKGLIVGVANNK--SIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQEL   55 (275)
T ss_dssp             TCEEEEECCCSTT--SHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc
Confidence            4679999998  6  8999999999999999998  6665   555555543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=94.15  E-value=0.055  Score=51.09  Aligned_cols=43  Identities=26%  Similarity=0.324  Sum_probs=34.5

Q ss_pred             CcEEEEeccC--CCchhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhC
Q 011973          298 TAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gat--g~~kig~ava~~L~~~~v~v~l--~~~~---~~~~l~~~~  342 (474)
                      .+.|+|+|++  |  -||+++|+.|+++|.+|.+  |+.+   ..++++++.
T Consensus         8 ~k~vlVTGas~~~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~   57 (261)
T 2wyu_A            8 GKKALVMGVTNQR--SLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEAL   57 (261)
T ss_dssp             TCEEEEESCCSSS--SHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCC--cHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc
Confidence            4679999998  6  8999999999999999988  6654   455555543

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=94.14  E-value=0.14  Score=50.06  Aligned_cols=98  Identities=11%  Similarity=0.025  Sum_probs=61.6

Q ss_pred             HcCCcEEEeccccccccccccCceeeecCCCCcc-ee----eecCChhHHHHHH-hcC-cCCCcEEEEeccCCCchhHHH
Q 011973          243 AKGVKVISLGLLNQGEELNRNGEIYLERQPNKLK-IK----VVDGSSLAAAVVV-NSL-PKTTAHVLLRGTVTANKVANA  315 (474)
Q Consensus       243 k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~~L~-ir----vv~GnsltaAvvl-~~i-p~~~~~V~l~Gatg~~kig~a  315 (474)
                      |-|=+|++.|++.+.-.+  ... .+.+-|+++. ..    ...-.-.||+-.+ +.. .+..+.|+++|++|  -||.+
T Consensus        91 ~vGdrV~~~G~~aey~~v--~~~-~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g--~iG~~  165 (336)
T 4b7c_A           91 QAGDYVNGALGVQDYFIG--EPK-GFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAG--AVGSV  165 (336)
T ss_dssp             CTTCEEEEECCSBSEEEE--CCT-TCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTS--HHHHH
T ss_pred             CCCCEEeccCCceEEEEe--chH-HeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCC--HHHHH
Confidence            346677777887662111  112 2334443231 11    1111224555555 222 23567899999998  99999


Q ss_pred             HHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 011973          316 VASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  345 (474)
Q Consensus       316 va~~L~~~~v~v~l--~~~~~~~~l~~~~~~~  345 (474)
                      +++.+...|.+|..  +++++++.++++++..
T Consensus       166 ~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~  197 (336)
T 4b7c_A          166 AGQIARLKGCRVVGIAGGAEKCRFLVEELGFD  197 (336)
T ss_dssp             HHHHHHHTTCEEEEEESSHHHHHHHHHTTCCS
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCC
Confidence            99999999999988  8899999996666543

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=94.10  E-value=0.04  Score=53.23  Aligned_cols=44  Identities=16%  Similarity=0.268  Sum_probs=38.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+   |+.++++++.+++.
T Consensus         9 ~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~   55 (291)
T 1e7w_A            9 VPVALVTGAAK--RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLN   55 (291)
T ss_dssp             CCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHh
Confidence            46799999998  9999999999999999988   77888888877764

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=94.08  E-value=0.14  Score=50.96  Aligned_cols=134  Identities=13%  Similarity=0.048  Sum_probs=83.6

Q ss_pred             cCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhHH
Q 011973          244 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  314 (474)
Q Consensus       244 ~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig~  314 (474)
                      .|+|+++-.  ..    |-.|. .+.-+|+ +.-.-+.||+.+|+       |+..+-+ +++.++|.++|+-   .+|+
T Consensus        65 ~g~K~~~~~--p~----n~~~~-v~L~d~~tG~p~a~ld~~~lT~~RTaA~s~laa~~La~~~~~~v~iIGaG---~~a~  134 (313)
T 3hdj_A           65 AGAKVYTTI--KG----QFQFV-ILLFSAADGRPLATCDAGTLTRKRTAACTVLAAGALARPRSSVLGLFGAG---TQGA  134 (313)
T ss_dssp             EEEEEEEEE--TT----EEEEE-EEEEETTTCCEEEEECSHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECCS---HHHH
T ss_pred             eEEEEeecC--CC----CceEE-EEEEECCCCCEEEEEcCchhhhHHHHHHHHHHHHhhccCCCcEEEEECcc---HHHH
Confidence            578877642  11    22333 4444443 35588999999985       3333333 6688899999965   8999


Q ss_pred             HHHHHHhc-c-CcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE----cC-cCChhhhhcCCCCce
Q 011973          315 AVASSLCQ-M-GIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV----GD-DLTGKEQARAPKGTI  383 (474)
Q Consensus       315 ava~~L~~-~-~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv----g~-~i~~~eq~~a~~G~~  383 (474)
                      ..+++|++ + ..+|.+  |+  +-+++.+++..+.+.... ..+.+ + ++++|+|.    ++ .++.   .+.++|++
T Consensus       135 ~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~~~~-~~~~~eav~~aDIVi~aT~s~~pvl~~---~~l~~G~~  208 (313)
T 3hdj_A          135 EHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGVPAR-MAAPADIAAQADIVVTATRSTTPLFAG---QALRAGAF  208 (313)
T ss_dssp             HHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTSCEE-ECCHHHHHHHCSEEEECCCCSSCSSCG---GGCCTTCE
T ss_pred             HHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCCeEE-EeCHHHHHhhCCEEEEccCCCCcccCH---HHcCCCcE
Confidence            99999984 3 456666  55  777777765543333322 22554 3 67777762    22 2332   35799999


Q ss_pred             eecccccCcc
Q 011973          384 FIPYTQIPPR  393 (474)
Q Consensus       384 f~~~~~v~p~  393 (474)
                      ++++.-..|.
T Consensus       209 V~~vGs~~p~  218 (313)
T 3hdj_A          209 VGAIGSSLPH  218 (313)
T ss_dssp             EEECCCSSTT
T ss_pred             EEECCCCCCc
Confidence            9998754443

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=94.07  E-value=0.067  Score=53.66  Aligned_cols=85  Identities=16%  Similarity=0.180  Sum_probs=57.0

Q ss_pred             hHHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc
Q 011973          285 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA  357 (474)
Q Consensus       285 ltaAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~  357 (474)
                      -|+..+++-+.     -.-++|+|+|+.+  -+|+.+|+.|.++|..|++  ++...++ |++.         +      
T Consensus       147 cTp~gv~~lL~~~~i~l~Gk~vvVIG~s~--iVG~p~A~lL~~~gAtVtv~~~~T~~l~-l~~~---------~------  208 (300)
T 4a26_A          147 CTAKGVIVLLKRCGIEMAGKRAVVLGRSN--IVGAPVAALLMKENATVTIVHSGTSTED-MIDY---------L------  208 (300)
T ss_dssp             HHHHHHHHHHHHHTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTSCHHH-HHHH---------H------
T ss_pred             CCHHHHHHHHHHcCCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCCCCch-hhhh---------h------
Confidence            35566655443     3678999999997  7999999999999999999  3233222 0010         0      


Q ss_pred             cCceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973          358 AHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       358 ~~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                       +++||+|  +|  +.++++.   .++|+++||++ +++
T Consensus       209 -~~ADIVI~Avg~p~~I~~~~---vk~GavVIDvg-i~~  242 (300)
T 4a26_A          209 -RTADIVIAAMGQPGYVKGEW---IKEGAAVVDVG-TTP  242 (300)
T ss_dssp             -HTCSEEEECSCCTTCBCGGG---SCTTCEEEECC-CEE
T ss_pred             -ccCCEEEECCCCCCCCcHHh---cCCCcEEEEEe-ccC
Confidence             2455655  22  3455544   49999999999 554

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=94.06  E-value=0.04  Score=54.50  Aligned_cols=44  Identities=16%  Similarity=0.268  Sum_probs=38.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+   |+.++++++++++.
T Consensus        46 ~k~~lVTGas~--GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~   92 (328)
T 2qhx_A           46 VPVALVTGAAK--RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLN   92 (328)
T ss_dssp             CCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999987   77888888877754

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=94.04  E-value=0.064  Score=55.00  Aligned_cols=89  Identities=17%  Similarity=0.187  Sum_probs=58.8

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE--Ec-
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG-  367 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--vg-  367 (474)
                      ...++|+++|+ |  .+|+++++.|...|. +|++  |+.++.+++.++++.+.    +...+..+  +.++++|  +| 
T Consensus       165 l~g~~VlIiGa-G--~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~----~~~~~l~~~l~~aDvVi~at~~  237 (404)
T 1gpj_A          165 LHDKTVLVVGA-G--EMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA----VRFDELVDHLARSDVVVSATAA  237 (404)
T ss_dssp             CTTCEEEEESC-C--HHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE----CCGGGHHHHHHTCSEEEECCSS
T ss_pred             ccCCEEEEECh-H--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCce----ecHHhHHHHhcCCCEEEEccCC
Confidence            35678999998 7  999999999999998 8888  88888878877654321    11122322  5667766  22 


Q ss_pred             -Cc-CChhhhhc-C-----CCCceeecccccCc
Q 011973          368 -DD-LTGKEQAR-A-----PKGTIFIPYTQIPP  392 (474)
Q Consensus       368 -~~-i~~~eq~~-a-----~~G~~f~~~~~v~p  392 (474)
                       .. ++.+.... +     .++.++++.+ .|+
T Consensus       238 ~~~~~~~~~l~~~~lk~r~~~~~v~vdia-~P~  269 (404)
T 1gpj_A          238 PHPVIHVDDVREALRKRDRRSPILIIDIA-NPR  269 (404)
T ss_dssp             SSCCBCHHHHHHHHHHCSSCCCEEEEECC-SSC
T ss_pred             CCceecHHHHHHHHHhccCCCCEEEEEcc-CCC
Confidence             22 23344433 2     4678888888 344

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=93.94  E-value=0.058  Score=50.45  Aligned_cols=44  Identities=14%  Similarity=0.210  Sum_probs=35.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcE-EEe--cch--hhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICK--DDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~-v~l--~~~--~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+ |.+  |++  +..++++++.+
T Consensus         5 ~k~vlVtGas~--gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~   53 (254)
T 1sby_A            5 NKNVIFVAALG--GIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINP   53 (254)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCT
T ss_pred             CcEEEEECCCC--hHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCC
Confidence            46799999998  9999999999999996 766  654  55667766543

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=93.86  E-value=0.17  Score=51.17  Aligned_cols=67  Identities=16%  Similarity=0.228  Sum_probs=46.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccc----cccceeeeccccc-CceeEEEE
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVE----AQHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~----~~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      ...+|.++|+ |  .||+++|..|++.|.  .+.|  .++++.+....++...    ....+...++|++ ++++++|+
T Consensus        20 ~~~kV~ViGa-G--~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~~~daDiVIi   95 (330)
T 3ldh_A           20 SYNKITVVGC-D--AVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSVSAGSKLVVI   95 (330)
T ss_dssp             CCCEEEEEST-T--HHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCSCSSCSEEEE
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHHhCCCCEEEE
Confidence            3568999999 8  999999999999888  7777  6777666544332221    1123233346666 88988776

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=93.83  E-value=0.039  Score=54.12  Aligned_cols=102  Identities=18%  Similarity=0.101  Sum_probs=69.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE--Ec----
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG----  367 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--vg----  367 (474)
                      ..+|.++|. |  .+|+++|+.|.+.|.+|++  |++++.+.++++   +    +...++.++  ++++++|  +.    
T Consensus         9 ~~~IgiIG~-G--~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~---g----~~~~~~~~e~~~~aDvVi~~vp~~~~   78 (306)
T 3l6d_A            9 EFDVSVIGL-G--AMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAA---G----AHLCESVKAALSASPATIFVLLDNHA   78 (306)
T ss_dssp             SCSEEEECC-S--HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH---T----CEECSSHHHHHHHSSEEEECCSSHHH
T ss_pred             CCeEEEECC-C--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC---C----CeecCCHHHHHhcCCEEEEEeCCHHH
Confidence            457999996 5  9999999999999999999  888988888765   1    111234432  5666655  21    


Q ss_pred             --CcCChhhhhcCCCCceeecccccCcc---C----CC-CCeeeecCCcccc
Q 011973          368 --DDLTGKEQARAPKGTIFIPYTQIPPR---K----LR-KDCFYHSTPAMII  409 (474)
Q Consensus       368 --~~i~~~eq~~a~~G~~f~~~~~v~p~---~----~R-~dc~y~~~~am~v  409 (474)
                        +.+.++.+..+++|+++++.+.++|.   +    ++ +.+.|...|.+--
T Consensus        79 ~~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~  130 (306)
T 3l6d_A           79 THEVLGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAY  130 (306)
T ss_dssp             HHHHHTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESC
T ss_pred             HHHHhcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccC
Confidence              12221133445899999999998887   1    12 4667777666543

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=93.81  E-value=0.067  Score=50.54  Aligned_cols=43  Identities=16%  Similarity=0.309  Sum_probs=34.3

Q ss_pred             CcEEEEeccC--CCchhHHHHHHHHhccCcEEEe--cch---hhHHHHHhhC
Q 011973          298 TAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gat--g~~kig~ava~~L~~~~v~v~l--~~~---~~~~~l~~~~  342 (474)
                      .+.|+|+|++  |  -||+++|+.|+++|.+|.+  |+.   +..++++++.
T Consensus         9 ~k~vlVTGas~~~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~   58 (265)
T 1qsg_A            9 GKRILVTGVASKL--SIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL   58 (265)
T ss_dssp             TCEEEECCCCSTT--SHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCC--CHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhc
Confidence            3679999998  6  8999999999999999988  665   4455555443

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=93.77  E-value=0.12  Score=54.76  Aligned_cols=86  Identities=13%  Similarity=0.076  Sum_probs=61.3

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE----c
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----G  367 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv----g  367 (474)
                      -..++|.++|. |  .||+.+|+.|...|.+|+.  ++.++.....+.   +.     .+.+.++  +.+++++.    -
T Consensus       255 l~GktVgIIG~-G--~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~---g~-----~~~~l~ell~~aDiVi~~~~t~  323 (479)
T 1v8b_A          255 ISGKIVVICGY-G--DVGKGCASSMKGLGARVYITEIDPICAIQAVME---GF-----NVVTLDEIVDKGDFFITCTGNV  323 (479)
T ss_dssp             CTTSEEEEECC-S--HHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTT---TC-----EECCHHHHTTTCSEEEECCSSS
T ss_pred             cCCCEEEEEee-C--HHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHc---CC-----EecCHHHHHhcCCEEEECCChh
Confidence            35678999994 6  9999999999999999999  444432111111   11     1224432  66777663    3


Q ss_pred             CcCChhhhhcCCCCceeecccccCc
Q 011973          368 DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       368 ~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                      ..|+.+....|++|+++|++++.+.
T Consensus       324 ~lI~~~~l~~MK~gailiNvgrg~~  348 (479)
T 1v8b_A          324 DVIKLEHLLKMKNNAVVGNIGHFDD  348 (479)
T ss_dssp             SSBCHHHHTTCCTTCEEEECSSTTT
T ss_pred             hhcCHHHHhhcCCCcEEEEeCCCCc
Confidence            5578889999999999999999777

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=93.76  E-value=0.15  Score=49.91  Aligned_cols=46  Identities=22%  Similarity=0.169  Sum_probs=38.4

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +..+.|+++|++|  -||+++++.+.+.|.+|..  +++++++.+ ++++.
T Consensus       144 ~~g~~vlV~Ga~g--giG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~  191 (333)
T 1v3u_A          144 KGGETVLVSAAAG--AVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGF  191 (333)
T ss_dssp             CSSCEEEEESTTB--HHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTC
T ss_pred             CCCCEEEEecCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCC
Confidence            3457899999998  9999999999999999988  788888888 44543

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=93.75  E-value=0.066  Score=53.44  Aligned_cols=91  Identities=16%  Similarity=0.218  Sum_probs=59.8

Q ss_pred             HHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc
Q 011973          286 AAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  358 (474)
Q Consensus       286 taAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~  358 (474)
                      |+..+++-+.     -..++|+|+|+.+  -||+-+|+.|.++|-.|++  ++.+.+++.-                   
T Consensus       142 Tp~gi~~ll~~~~i~l~gk~vvVIG~s~--iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~-------------------  200 (288)
T 1b0a_A          142 TPRGIVTLLERYNIDTFGLNAVVIGASN--IVGRPMSMELLLAGCTTTVTHRFTKNLRHHV-------------------  200 (288)
T ss_dssp             HHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHHTTTCEEEEECSSCSCHHHHH-------------------
T ss_pred             cHHHHHHHHHHcCCCCCCCEEEEECCCh--HHHHHHHHHHHHCCCeEEEEeCCchhHHHHh-------------------
Confidence            5555555443     3578999999996  7899999999999999999  2221111110                   


Q ss_pred             CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCeee
Q 011973          359 HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY  401 (474)
Q Consensus       359 ~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~y  401 (474)
                      +.++++|  +|  +.++++..   ++|+++||++ +++.   ++--|+-|
T Consensus       201 ~~ADIVI~Avg~p~lI~~~~v---k~GavVIDVg-i~r~~~g~l~GDVdf  246 (288)
T 1b0a_A          201 ENADLLIVAVGKPGFIPGDWI---KEGAIVIDVG-INRLENGKVVGDVVF  246 (288)
T ss_dssp             HHCSEEEECSCCTTCBCTTTS---CTTCEEEECC-CEECTTSCEECSBCH
T ss_pred             ccCCEEEECCCCcCcCCHHHc---CCCcEEEEcc-CCccCCCCccCCcCH
Confidence            3555655  22  23555544   8999999999 7764   23255543

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=93.69  E-value=0.04  Score=53.41  Aligned_cols=41  Identities=24%  Similarity=0.320  Sum_probs=35.0

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCc
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~  343 (474)
                      +|+++|+ |  ..|+|++..|.+.|. +|.+  |+.++.++|.+++.
T Consensus       110 ~vliiGa-G--g~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~  153 (253)
T 3u62_A          110 PVVVVGA-G--GAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVK  153 (253)
T ss_dssp             SEEEECC-S--HHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCE
T ss_pred             eEEEECc-H--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcc
Confidence            8999998 4  799999999999998 7887  88888888776643

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=93.69  E-value=0.069  Score=51.77  Aligned_cols=37  Identities=16%  Similarity=0.180  Sum_probs=30.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      ..+.|+|+|++|++-||+++|+.|+++|.+|.+  |+++
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~   68 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA   68 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            457899999997223999999999999999998  6643

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=93.68  E-value=0.28  Score=48.03  Aligned_cols=58  Identities=21%  Similarity=0.179  Sum_probs=44.8

Q ss_pred             hHHHHHHhc-C-cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          285 LAAAVVVNS-L-PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       285 ltaAvvl~~-i-p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .||+-.+.. . .+..+.|+++|++|  -||.++++.+...|.+|..  +++++++.++++++.
T Consensus       141 ~ta~~al~~~~~~~~g~~vlI~Ga~g--~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~  202 (345)
T 2j3h_A          141 MTAYAGFYEVCSPKEGETVYVSAASG--AVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGF  202 (345)
T ss_dssp             HHHHHHHHTTSCCCTTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCC
T ss_pred             HHHHHHHHHHhCCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC
Confidence            355555532 2 23456899999998  9999999999999999887  888999988866654

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=93.64  E-value=0.077  Score=50.78  Aligned_cols=43  Identities=16%  Similarity=0.261  Sum_probs=34.3

Q ss_pred             CcEEEEeccC--CCchhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhC
Q 011973          298 TAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gat--g~~kig~ava~~L~~~~v~v~l--~~~~---~~~~l~~~~  342 (474)
                      .+.|+|+|++  |  -||+++|+.|+++|.+|.+  |+.+   ..++++++.
T Consensus        21 ~k~vlVTGas~~~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~   70 (285)
T 2p91_A           21 GKRALITGVANER--SIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGF   70 (285)
T ss_dssp             TCEEEECCCSSTT--SHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCC--cHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc
Confidence            4679999998  6  8999999999999999998  6654   455555443

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=93.64  E-value=0.11  Score=46.64  Aligned_cols=53  Identities=19%  Similarity=0.116  Sum_probs=40.2

Q ss_pred             HHHHHHhcC--cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          286 AAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       286 taAvvl~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      ||+-.+...  .+..+.|+++|++|  -||+++++.+.+.|.+|..  +++++.+.+++
T Consensus        25 ta~~~l~~~~~~~~g~~vlV~Ga~g--giG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~   81 (198)
T 1pqw_A           25 TAWHSLCEVGRLSPGERVLIHSATG--GVGMAAVSIAKMIGARIYTTAGSDAKREMLSR   81 (198)
T ss_dssp             HHHHHHHTTSCCCTTCEEEETTTTS--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCEEEEeeCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            444444322  23456899999998  9999999999999999887  78888877754

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=93.63  E-value=0.089  Score=43.92  Aligned_cols=40  Identities=25%  Similarity=0.339  Sum_probs=35.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      .+|+++|+ |  .+|+.+|+.|.+.|.+|++  +++++.+.++++
T Consensus         5 m~i~IiG~-G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~   46 (140)
T 1lss_A            5 MYIIIAGI-G--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE   46 (140)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh
Confidence            47999998 7  9999999999999999988  888888888764

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=93.62  E-value=0.16  Score=51.09  Aligned_cols=68  Identities=19%  Similarity=0.309  Sum_probs=45.1

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccc--cce-eeeccccc-CceeEEEE
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQ--HNL-VLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~~~--~~l-~~~t~~~~-~~~~vwiv  366 (474)
                      +...+|.++|| |  .||+++|..|++.+.  .+.|  +++++.+-...++.....  ... +....|++ ++++++|+
T Consensus         7 ~~~~kV~ViGa-G--~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi   82 (326)
T 3vku_A            7 KDHQKVILVGD-G--AVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVI   82 (326)
T ss_dssp             CCCCEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEE
T ss_pred             CCCCEEEEECC-C--HHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEE
Confidence            34568999997 7  999999999998887  7777  777777744444332211  111 22224555 88888775

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=93.58  E-value=0.12  Score=50.95  Aligned_cols=101  Identities=18%  Similarity=0.237  Sum_probs=68.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE--EcCcC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDDL  370 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--vg~~i  370 (474)
                      ...+|.++|. |  .+|+++|+.|.+.|.+|++  |++++.++++++   +    +...++.++  ++++++|  +.+.-
T Consensus        30 ~~~~I~iIG~-G--~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~---g----~~~~~~~~e~~~~aDvVi~~vp~~~   99 (320)
T 4dll_A           30 YARKITFLGT-G--SMGLPMARRLCEAGYALQVWNRTPARAASLAAL---G----ATIHEQARAAARDADIVVSMLENGA   99 (320)
T ss_dssp             CCSEEEEECC-T--TTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT---T----CEEESSHHHHHTTCSEEEECCSSHH
T ss_pred             CCCEEEEECc-c--HHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC---C----CEeeCCHHHHHhcCCEEEEECCCHH
Confidence            3458999998 4  8999999999999999999  889999988776   1    122334443  6776655  32211


Q ss_pred             Ch-------hhhhcCCCCceeecccccCccC-------CC-CCeeeecCCcc
Q 011973          371 TG-------KEQARAPKGTIFIPYTQIPPRK-------LR-KDCFYHSTPAM  407 (474)
Q Consensus       371 ~~-------~eq~~a~~G~~f~~~~~v~p~~-------~R-~dc~y~~~~am  407 (474)
                      .-       +-...+++|+++++.+.++|..       ++ +.+.|...|.+
T Consensus       100 ~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~  151 (320)
T 4dll_A          100 VVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVS  151 (320)
T ss_dssp             HHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred             HHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCc
Confidence            11       1122468999999999887761       12 45667666654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=93.57  E-value=0.061  Score=53.21  Aligned_cols=44  Identities=16%  Similarity=0.170  Sum_probs=36.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe-------cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT-------ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-------~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|..       |++++++++++++.
T Consensus         5 ~k~vlVTGas~--GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~   55 (324)
T 3u9l_A            5 KKIILITGASS--GFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFAR   55 (324)
T ss_dssp             CCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHH
Confidence            35799999998  9999999999999999984       55777888876643

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=93.54  E-value=0.071  Score=49.57  Aligned_cols=34  Identities=24%  Similarity=0.379  Sum_probs=30.9

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++
T Consensus         3 k~vlVTGas~--giG~~~a~~l~~~G~~V~~~~r~~~~   38 (239)
T 2ekp_A            3 RKALVTGGSR--GIGRAIAEALVARGYRVAIASRNPEE   38 (239)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            5799999998  9999999999999999988  77665

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=93.52  E-value=0.05  Score=51.81  Aligned_cols=38  Identities=21%  Similarity=0.262  Sum_probs=32.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHH
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  336 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~  336 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++..
T Consensus        26 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~   65 (260)
T 3gem_A           26 SSAPILITGASQ--RVGLHCALRLLEHGHRVIISYRTEHASV   65 (260)
T ss_dssp             -CCCEEESSTTS--HHHHHHHHHHHHTTCCEEEEESSCCHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCChHHHH
Confidence            356799999998  9999999999999999999  7766543

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=93.51  E-value=0.091  Score=55.00  Aligned_cols=126  Identities=16%  Similarity=0.247  Sum_probs=71.1

Q ss_pred             cCChhHHHHHHhcCcCC--CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc-----------c
Q 011973          281 DGSSLAAAVVVNSLPKT--TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-----------E  345 (474)
Q Consensus       281 ~GnsltaAvvl~~ip~~--~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~-----------~  345 (474)
                      +|+....-+=..++.+.  ..+|.++|+ |  .+|.++|..|++ |.+|++  +++++.+.+++....           +
T Consensus        17 ~~~~~~~~~~~~~~~r~~~~mkIaVIGl-G--~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~   92 (432)
T 3pid_A           17 RGSHMASMTGGQQMGRGSEFMKITISGT-G--YVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAE   92 (432)
T ss_dssp             ------------------CCCEEEEECC-S--HHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH
T ss_pred             ccchhhhccCCcccccccCCCEEEEECc-C--HHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhh
Confidence            44444443444455443  448999996 5  999999999998 999999  899999999875211           0


Q ss_pred             cccceeeecccc-c-CceeEEE--EcCcCCh--------------hhhhcCCCCceeecccccCcc---CCC-----CCe
Q 011973          346 AQHNLVLSTSYA-A-HKTKIWL--VGDDLTG--------------KEQARAPKGTIFIPYTQIPPR---KLR-----KDC  399 (474)
Q Consensus       346 ~~~~l~~~t~~~-~-~~~~vwi--vg~~i~~--------------~eq~~a~~G~~f~~~~~v~p~---~~R-----~dc  399 (474)
                      ...++...++.+ + ++++++|  |.+..++              ++...+++|++++.-|-+||.   +++     .++
T Consensus        93 ~~~~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~l~~g~iVV~~STv~pgtt~~l~~~l~~~~v  172 (432)
T 3pid_A           93 KPLNFRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTEINPNAVMIIKSTIPVGFTRDIKERLGIDNV  172 (432)
T ss_dssp             SCCCEEEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHHHCTTSEEEECSCCCTTHHHHHHHHHTCCCE
T ss_pred             ccCCeEEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHhcCCCcEEEEeCCCChHHHHHHHHHHhhccE
Confidence            012322233544 3 7777755  4333322              122236899999999989987   222     233


Q ss_pred             eeecCCccccCCC
Q 011973          400 FYHSTPAMIIPPS  412 (474)
Q Consensus       400 ~y~~~~am~vP~~  412 (474)
                      .|  .|...-|+.
T Consensus       173 ~~--sPe~~~~G~  183 (432)
T 3pid_A          173 IF--SPEFLREGR  183 (432)
T ss_dssp             EE--CCCCCCTTS
T ss_pred             ee--cCccCCcch
Confidence            33  666656654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=93.51  E-value=0.044  Score=51.60  Aligned_cols=36  Identities=8%  Similarity=0.130  Sum_probs=31.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      -.+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++
T Consensus        21 m~k~vlITGas~--gIG~~la~~l~~~G~~V~~~~r~~~~   58 (251)
T 3orf_A           21 MSKNILVLGGSG--ALGAEVVKFFKSKSWNTISIDFRENP   58 (251)
T ss_dssp             -CCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred             cCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCccc
Confidence            357899999998  9999999999999999998  66654

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=93.49  E-value=0.082  Score=52.43  Aligned_cols=89  Identities=17%  Similarity=0.191  Sum_probs=60.4

Q ss_pred             HHHHHHhcCc---CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--
Q 011973          286 AAAVVVNSLP---KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--  358 (474)
Q Consensus       286 taAvvl~~ip---~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--  358 (474)
                      |++.+++-+.   -.-++|+|+|+.+  -+|+.+|+.|.++|..|++  ++.+                     ++++  
T Consensus       135 Tp~gv~~lL~~~~l~Gk~vvVvG~s~--iVG~plA~lL~~~gAtVtv~~~~t~---------------------~L~~~~  191 (276)
T 3ngx_A          135 TPRAVIDIMDYYGYHENTVTIVNRSP--VVGRPLSMMLLNRNYTVSVCHSKTK---------------------DIGSMT  191 (276)
T ss_dssp             HHHHHHHHHHHHTCCSCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTCS---------------------CHHHHH
T ss_pred             cHHHHHHHHHHhCcCCCEEEEEcCCh--HHHHHHHHHHHHCCCeEEEEeCCcc---------------------cHHHhh
Confidence            5555555544   3578999999997  8999999999999999999  2221                     1221  


Q ss_pred             CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc--CCCCCeee
Q 011973          359 HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCFY  401 (474)
Q Consensus       359 ~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~--~~R~dc~y  401 (474)
                      +.++|+|  +|  +.++++.   .++|+++||++ +++.  ++--|+-|
T Consensus       192 ~~ADIVI~Avg~p~~I~~~~---vk~GavVIDvg-i~~~~gkl~GDVdf  236 (276)
T 3ngx_A          192 RSSKIVVVAVGRPGFLNREM---VTPGSVVIDVG-INYVNDKVVGDANF  236 (276)
T ss_dssp             HHSSEEEECSSCTTCBCGGG---CCTTCEEEECC-CEEETTEEECSBCH
T ss_pred             ccCCEEEECCCCCccccHhh---ccCCcEEEEec-cCccCCceeccccH
Confidence            4556666  33  3466654   49999999999 6663  22245543

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=93.43  E-value=0.11  Score=50.08  Aligned_cols=100  Identities=13%  Similarity=0.155  Sum_probs=67.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE--EcCc--C
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD--L  370 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--vg~~--i  370 (474)
                      .+|.++|. |  .+|+++|+.|.+.|.+|++  |++++.+.++++       .+...++.++  ++++++|  +.+.  +
T Consensus         2 ~~i~iIG~-G--~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~~~~~~~~~~~~aDvvi~~vp~~~~~   71 (287)
T 3pef_A            2 QKFGFIGL-G--IMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL-------GAERAATPCEVVESCPVTFAMLADPAAA   71 (287)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-------TCEECSSHHHHHHHCSEEEECCSSHHHH
T ss_pred             CEEEEEee-c--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-------CCeecCCHHHHHhcCCEEEEEcCCHHHH
Confidence            47899996 5  9999999999999999999  899999988775       1122234443  5666655  3211  1


Q ss_pred             Ch-----hhh-hcCCCCceeecccccCccC-------CC-CCeeeecCCccc
Q 011973          371 TG-----KEQ-ARAPKGTIFIPYTQIPPRK-------LR-KDCFYHSTPAMI  408 (474)
Q Consensus       371 ~~-----~eq-~~a~~G~~f~~~~~v~p~~-------~R-~dc~y~~~~am~  408 (474)
                      ..     ++. ..+++|+++++.+.++|..       ++ +.+.|...|.+.
T Consensus        72 ~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g  123 (287)
T 3pef_A           72 EEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSG  123 (287)
T ss_dssp             HHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEEC
T ss_pred             HHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEECCCcC
Confidence            10     111 2468999999999887761       11 456676666543

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=93.42  E-value=0.14  Score=50.57  Aligned_cols=120  Identities=11%  Similarity=0.006  Sum_probs=75.0

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccc
Q 011973          280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY  356 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~  356 (474)
                      |||-....+.--..++...++|+|+|+-   -.|+|++..|.+.|. +|++  |+.++.++|.+++..      ....+.
T Consensus       104 TD~~G~~~~L~~~~~~~~~k~vlvlGaG---Gaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~------~~~~~l  174 (282)
T 3fbt_A          104 TDYIGFGKMLSKFRVEIKNNICVVLGSG---GAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKV------ISYDEL  174 (282)
T ss_dssp             CHHHHHHHHHHHTTCCCTTSEEEEECSS---TTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEE------EEHHHH
T ss_pred             CcHHHHHHHHHHcCCCccCCEEEEECCc---HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCc------ccHHHH
Confidence            6665555554333455567899999996   489999999999998 8888  999999999877521      100011


Q ss_pred             ccCceeEEE----EcCc--C--ChhhhhcCCCCceeecccccCcc------CCC-CCeeeecCCcccc
Q 011973          357 AAHKTKIWL----VGDD--L--TGKEQARAPKGTIFIPYTQIPPR------KLR-KDCFYHSTPAMII  409 (474)
Q Consensus       357 ~~~~~~vwi----vg~~--i--~~~eq~~a~~G~~f~~~~~v~p~------~~R-~dc~y~~~~am~v  409 (474)
                      .+..++++|    +|-.  .  .|-+....+++++++|+. ..|.      ..| +-|.+..+..|-+
T Consensus       175 ~~l~~DivInaTp~Gm~~~~~~~pi~~~~l~~~~~v~Dlv-Y~P~~T~ll~~A~~~G~~~~~Gl~MLv  241 (282)
T 3fbt_A          175 SNLKGDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLI-YNPVETLFLKYARESGVKAVNGLYMLV  241 (282)
T ss_dssp             TTCCCSEEEECSSTTSTTSTTCCSSCHHHHTTCSEEEESC-CSSSSCHHHHHHHHTTCEEECSHHHHH
T ss_pred             HhccCCEEEECCccCccCCCccCCCCHHHcCCCCEEEEEe-eCCCCCHHHHHHHHCcCeEeCcHHHHH
Confidence            001345666    2210  0  011222347888899988 4443      222 5687877777755

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=93.40  E-value=0.16  Score=54.16  Aligned_cols=86  Identities=14%  Similarity=0.061  Sum_probs=61.0

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE----c
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----G  367 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv----g  367 (474)
                      -..++|.++|. |  .||+.+|+.|...|.+|+.  ++.++.  ++.. ..+.     .+.+.++  +.+|+++.    -
T Consensus       275 L~GktVgIIG~-G--~IG~~vA~~l~~~G~~V~v~d~~~~~~--~~a~-~~G~-----~~~~l~ell~~aDiVi~~~~t~  343 (494)
T 3d64_A          275 IAGKIAVVAGY-G--DVGKGCAQSLRGLGATVWVTEIDPICA--LQAA-MEGY-----RVVTMEYAADKADIFVTATGNY  343 (494)
T ss_dssp             CTTCEEEEECC-S--HHHHHHHHHHHTTTCEEEEECSCHHHH--HHHH-TTTC-----EECCHHHHTTTCSEEEECSSSS
T ss_pred             cCCCEEEEEcc-C--HHHHHHHHHHHHCCCEEEEEeCChHhH--HHHH-HcCC-----EeCCHHHHHhcCCEEEECCCcc
Confidence            35678999995 5  9999999999999999999  555442  1111 1111     1224432  56766552    3


Q ss_pred             CcCChhhhhcCCCCceeecccccCc
Q 011973          368 DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       368 ~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                      ..|+.+.+.+|++|+++|++++.+.
T Consensus       344 ~lI~~~~l~~MK~gAilINvgrg~v  368 (494)
T 3d64_A          344 HVINHDHMKAMRHNAIVCNIGHFDS  368 (494)
T ss_dssp             CSBCHHHHHHCCTTEEEEECSSSSC
T ss_pred             cccCHHHHhhCCCCcEEEEcCCCcc
Confidence            4688899999999999999999766

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=93.35  E-value=0.058  Score=49.56  Aligned_cols=34  Identities=18%  Similarity=0.298  Sum_probs=30.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      +.|+|+|++|  -||+++|+.|.++|.+|.+  |++++
T Consensus         2 k~vlVtGasg--~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (255)
T 2dkn_A            2 SVIAITGSAS--GIGAALKELLARAGHTVIGIDRGQAD   37 (255)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             cEEEEeCCCc--HHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            4699999998  9999999999999999998  66543

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=93.33  E-value=0.029  Score=52.71  Aligned_cols=38  Identities=26%  Similarity=0.252  Sum_probs=32.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHH
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  336 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~  336 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+
T Consensus        14 ~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~   53 (247)
T 1uzm_A           14 VSRSVLVTGGNR--GIGLAIAQRLAADGHKVAVTHRGSGAPK   53 (247)
T ss_dssp             CCCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSSCCCT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChHHHH
Confidence            356899999998  9999999999999999998  7766544

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=93.31  E-value=0.1  Score=47.53  Aligned_cols=88  Identities=13%  Similarity=0.102  Sum_probs=55.0

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc-cceeeecccc-c-CceeEEEEc--CcCCh
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ-HNLVLSTSYA-A-HKTKIWLVG--DDLTG  372 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~-~~l~~~t~~~-~-~~~~vwivg--~~i~~  372 (474)
                      +|.++|++|  .+|+++|+.|.+.|.+|.+  |++++.+.++++...... .. +..++++ + ++++++|.-  .....
T Consensus         2 ~i~iiGa~G--~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~Vi~~~~~~~~~   78 (212)
T 1jay_A            2 RVALLGGTG--NLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDAS-ITGMKNEDAAEACDIAVLTIPWEHAI   78 (212)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCC-EEEEEHHHHHHHCSEEEECSCHHHHH
T ss_pred             eEEEEcCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCC-CChhhHHHHHhcCCEEEEeCChhhHH
Confidence            589999999  9999999999999999988  888888887765321000 11 2123443 2 567776631  11111


Q ss_pred             h---hhh-cCCCCceeecccc-cC
Q 011973          373 K---EQA-RAPKGTIFIPYTQ-IP  391 (474)
Q Consensus       373 ~---eq~-~a~~G~~f~~~~~-v~  391 (474)
                      +   +.. .+ +|+++++.+. ++
T Consensus        79 ~~~~~l~~~~-~~~~vi~~~~g~~  101 (212)
T 1jay_A           79 DTARDLKNIL-REKIVVSPLVPVS  101 (212)
T ss_dssp             HHHHHTHHHH-TTSEEEECCCCEE
T ss_pred             HHHHHHHHHc-CCCEEEEcCCCcC
Confidence            1   111 12 4888888886 44

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=93.29  E-value=0.061  Score=50.55  Aligned_cols=34  Identities=15%  Similarity=0.304  Sum_probs=30.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+++
T Consensus         4 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~   39 (255)
T 2q2v_A            4 GKTALVTGSTS--GIGLGIAQVLARAGANIVLNGFGDP   39 (255)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCch
Confidence            36799999998  9999999999999999988  6554

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=93.24  E-value=0.1  Score=51.89  Aligned_cols=81  Identities=21%  Similarity=0.221  Sum_probs=56.2

Q ss_pred             HHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhcc--CcEEEe--cchhhHHHHHhhCccccccceeeeccc
Q 011973          286 AAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY  356 (474)
Q Consensus       286 taAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~--~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~  356 (474)
                      |+..+++-+.     -..++|+|+|+..  -||+-+|+.|.++  |-.|++  ++.+                     ++
T Consensus       141 Tp~gi~~ll~~~~i~l~gk~vvVvG~s~--iVG~p~A~lL~~~g~~atVtv~h~~t~---------------------~L  197 (281)
T 2c2x_A          141 TPRGIVHLLRRYDISIAGAHVVVIGRGV--TVGRPLGLLLTRRSENATVTLCHTGTR---------------------DL  197 (281)
T ss_dssp             HHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHTSTTTCCEEEEECTTCS---------------------CH
T ss_pred             hHHHHHHHHHHcCCCCCCCEEEEECCCc--HHHHHHHHHHhcCCCCCEEEEEECchh---------------------HH
Confidence            5666655543     3578999999985  6799999999999  899998  2221                     11


Q ss_pred             cc--CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc
Q 011973          357 AA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       357 ~~--~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~  393 (474)
                      ++  +.+||+|  +|  ..++++..   ++|+++||++ +|+.
T Consensus       198 ~~~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDVg-i~r~  236 (281)
T 2c2x_A          198 PALTRQADIVVAAVGVAHLLTADMV---RPGAAVIDVG-VSRT  236 (281)
T ss_dssp             HHHHTTCSEEEECSCCTTCBCGGGS---CTTCEEEECC-EEEE
T ss_pred             HHHHhhCCEEEECCCCCcccCHHHc---CCCcEEEEcc-CCCC
Confidence            11  4566666  22  24566554   8999999999 7763

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=93.24  E-value=0.1  Score=50.54  Aligned_cols=44  Identities=23%  Similarity=0.329  Sum_probs=35.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc--hhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~--~~~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+  +++.+++++++
T Consensus        48 ~~k~vlVTGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~   95 (294)
T 3r3s_A           48 KDRKALVTGGDS--GIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALI   95 (294)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHH
Confidence            357899999998  9999999999999999988  43  45566666553

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=93.18  E-value=0.049  Score=52.64  Aligned_cols=38  Identities=26%  Similarity=0.215  Sum_probs=30.7

Q ss_pred             cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          295 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       295 p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      |+..++|+|+|++|  -||+++++.|.++|.+|..  |+.++
T Consensus         6 ~~~~~~vlVTGatG--fIG~~l~~~Ll~~G~~V~~~~r~~~~   45 (338)
T 2rh8_A            6 PIGKKTACVVGGTG--FVASLLVKLLLQKGYAVNTTVRDPDN   45 (338)
T ss_dssp             ---CCEEEEECTTS--HHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred             CCCCCEEEEECCch--HHHHHHHHHHHHCCCEEEEEEcCcch
Confidence            44457899999999  9999999999999999875  66553

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=93.12  E-value=0.095  Score=45.17  Aligned_cols=41  Identities=22%  Similarity=0.354  Sum_probs=36.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      ..+|+++|. |  .+|+.+|+.|.+.|.+|++  +++++.+.+++.
T Consensus         7 ~~~viIiG~-G--~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~   49 (140)
T 3fwz_A            7 CNHALLVGY-G--RVGSLLGEKLLASDIPLVVIETSRTRVDELRER   49 (140)
T ss_dssp             CSCEEEECC-S--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT
T ss_pred             CCCEEEECc-C--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc
Confidence            568999998 5  9999999999999999999  889999888763

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=93.10  E-value=0.049  Score=50.48  Aligned_cols=34  Identities=18%  Similarity=0.306  Sum_probs=30.5

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+.++
T Consensus         4 k~vlITGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~   39 (236)
T 1ooe_A            4 GKVIVYGGKG--ALGSAILEFFKKNGYTVLNIDLSAND   39 (236)
T ss_dssp             EEEEEETTTS--HHHHHHHHHHHHTTEEEEEEESSCCT
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEecCccc
Confidence            5799999998  9999999999999999998  76654

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=93.09  E-value=0.12  Score=48.61  Aligned_cols=39  Identities=18%  Similarity=0.262  Sum_probs=34.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      .+|+|+|| |  -||+++++.|.++|.+|..  |+.++.+.++.
T Consensus         6 ~~ilVtGa-G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~   46 (286)
T 3ius_A            6 GTLLSFGH-G--YTARVLSRALAPQGWRIIGTSRNPDQMEAIRA   46 (286)
T ss_dssp             CEEEEETC-C--HHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH
T ss_pred             CcEEEECC-c--HHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh
Confidence            57999998 9  9999999999999999988  88888777764

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=93.08  E-value=0.058  Score=50.22  Aligned_cols=35  Identities=14%  Similarity=0.226  Sum_probs=31.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~   43 (241)
T 1dhr_A            7 ARRVLVYGGRG--ALGSRCVQAFRARNWWVASIDVVENE   43 (241)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHTTTCEEEEEESSCCT
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHhCCCEEEEEeCChhh
Confidence            45799999998  9999999999999999998  76654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=93.08  E-value=0.053  Score=51.47  Aligned_cols=36  Identities=25%  Similarity=0.284  Sum_probs=31.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  335 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~  335 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+++++
T Consensus        21 ~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~   58 (253)
T 2nm0_A           21 SRSVLVTGGNR--GIGLAIARAFADAGDKVAITYRSGEPP   58 (253)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSSCCC
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChHhh
Confidence            56899999998  9999999999999999988  666543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=93.02  E-value=0.069  Score=49.68  Aligned_cols=34  Identities=18%  Similarity=0.306  Sum_probs=30.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |++++
T Consensus         2 k~vlVTGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~   37 (257)
T 1fjh_A            2 SIIVISGCAT--GIGAATRKVLEAAGHQIVGIDIRDAE   37 (257)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            4689999998  9999999999999999988  66553

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=93.00  E-value=0.19  Score=51.08  Aligned_cols=90  Identities=16%  Similarity=0.168  Sum_probs=61.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc-cce------------e-e-e------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ-HNL------------V-L-S------  353 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~-~~l------------~-~-~------  353 (474)
                      ..++|+++|+ |  .||+++++.|...|.+|+.  ++.++++.+++ ++.... .+.            . . +      
T Consensus       171 ~g~~V~ViGa-G--~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~  246 (384)
T 1l7d_A          171 PPARVLVFGV-G--VAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKK  246 (384)
T ss_dssp             CCCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CC
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeecccccccccccccchhhcCHHHHhh
Confidence            3568999997 6  9999999999999999888  77778877765 432210 000            0 0 0      


Q ss_pred             -c-cccc--CceeEEE--E---cC----cCChhhhhcCCCCceeecccccC
Q 011973          354 -T-SYAA--HKTKIWL--V---GD----DLTGKEQARAPKGTIFIPYTQIP  391 (474)
Q Consensus       354 -t-~~~~--~~~~vwi--v---g~----~i~~~eq~~a~~G~~f~~~~~v~  391 (474)
                       . .+++  +.++++|  +   |.    .++.+....+++|.++++++ .+
T Consensus       247 ~~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva-~~  296 (384)
T 1l7d_A          247 QAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA-VE  296 (384)
T ss_dssp             HHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT-GG
T ss_pred             hHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe-cC
Confidence             0 1222  5567766  3   42    35788889999999999999 44

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=92.85  E-value=0.11  Score=50.95  Aligned_cols=30  Identities=20%  Similarity=0.227  Sum_probs=28.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhc--cCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQ--MGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~--~~v~v~l  329 (474)
                      .+.|+|+|++|  -||+++|+.|.+  +|.+|..
T Consensus        10 ~~~vlVTGatG--~IG~~l~~~L~~~~~g~~V~~   41 (362)
T 3sxp_A           10 NQTILITGGAG--FVGSNLAFHFQENHPKAKVVV   41 (362)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHHCTTSEEEE
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHhhCCCCeEEE
Confidence            46899999999  999999999998  9999998

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=92.83  E-value=0.1  Score=50.72  Aligned_cols=30  Identities=20%  Similarity=0.297  Sum_probs=28.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.|+|+|+||  -||+++++.|.++|.+|..
T Consensus        27 ~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~   56 (343)
T 2b69_A           27 RKRILITGGAG--FVGSHLTDKLMMDGHEVTV   56 (343)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEEcCcc--HHHHHHHHHHHHCCCEEEE
Confidence            56899999999  9999999999999999988

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=92.83  E-value=0.046  Score=56.79  Aligned_cols=112  Identities=11%  Similarity=-0.017  Sum_probs=61.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhCccccccceeeeccccc-Cce-eEEEEcCcC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRIPVEAQHNLVLSTSYAA-HKT-KIWLVGDDL  370 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~---~~~~l~~~~~~~~~~~l~~~t~~~~-~~~-~vwivg~~i  370 (474)
                      .+.|+|+||||  -||+++++.|.++|.+|..  |+.+   ..+++++.+..-...      ...+ ... ..++.||..
T Consensus       150 ~~~VLVTGatG--~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~------~~~~~~~~~v~~v~~Dl~  221 (508)
T 4f6l_B          150 LGNTLLTGATG--FLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSE------ETVEMMLSNIEVIVGDFE  221 (508)
T ss_dssp             CEEEEESCTTS--HHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCH------HHHHHHSTTEEEEEEBTT
T ss_pred             CCeEEEECCcc--chHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhccc------ccchhccCceEEEecCCc
Confidence            46899999999  9999999999999999988  6665   333443332211000      0000 011 236667776


Q ss_pred             ChhhhhcCCCCceeecccccCccCCCCCeeeecCCccccCCCCccccccccccCcchhHHHHH
Q 011973          371 TGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRI  433 (474)
Q Consensus       371 ~~~eq~~a~~G~~f~~~~~v~p~~~R~dc~y~~~~am~vP~~~~~~~~~e~~~prr~~~Ac~a  433 (474)
                      +++.+.                ...+-|+.|+....+....+.+.+..-|....+..+.||..
T Consensus       222 d~~~l~----------------~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~  268 (508)
T 4f6l_B          222 CMDDVV----------------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ  268 (508)
T ss_dssp             BCSSCC----------------CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT
T ss_pred             ccccCC----------------CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh
Confidence            655552                11345777776665544444443333344455555666554

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=92.82  E-value=0.082  Score=50.52  Aligned_cols=37  Identities=22%  Similarity=0.325  Sum_probs=31.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhH
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  335 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~  335 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.
T Consensus        13 ~~k~vlVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~   51 (269)
T 3vtz_A           13 TDKVAIVTGGSS--GIGLAVVDALVRYGAKVVSVSLDEKSD   51 (269)
T ss_dssp             TTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCC--C
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCchhc
Confidence            577899999998  9999999999999999998  665543

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=92.82  E-value=0.14  Score=51.41  Aligned_cols=66  Identities=17%  Similarity=0.197  Sum_probs=44.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccc-----cccceeeeccccc-CceeEEEE
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      ..+|.++|| |  .+|.++|..|++.|. .+.|  +++++.+....++...     ....+...+++++ ++++++|+
T Consensus         7 ~~kI~viGa-G--~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~~a~~~aDiVIi   81 (324)
T 3gvi_A            7 RNKIALIGS-G--MIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDYAAIEGADVVIV   81 (324)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSGGGGTTCSEEEE
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCHHHHCCCCEEEE
Confidence            358999999 7  999999999998888 8888  7777765433332221     1223222335566 88887664

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=92.80  E-value=0.13  Score=51.46  Aligned_cols=68  Identities=16%  Similarity=0.149  Sum_probs=46.7

Q ss_pred             CcCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccc-----cccceeee-cccc-c-Ccee
Q 011973          294 LPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYA-A-HKTK  362 (474)
Q Consensus       294 ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~-t~~~-~-~~~~  362 (474)
                      .++...+|.++|| |  .+|.++|..|++.|. +|.|  +++++++.....+...     ...+ +.. ++++ + ++++
T Consensus         5 ~~~~~~kI~VIGa-G--~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~-i~~t~d~~ea~~~aD   80 (331)
T 1pzg_A            5 LVQRRKKVAMIGS-G--MIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVS-VRAEYSYEAALTGAD   80 (331)
T ss_dssp             CCSCCCEEEEECC-S--HHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCC-EEEECSHHHHHTTCS
T ss_pred             cCCCCCEEEEECC-C--HHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCE-EEEeCCHHHHhCCCC
Confidence            3455568999999 7  999999999999997 8888  7777777643332211     1122 333 4665 5 8887


Q ss_pred             EEE
Q 011973          363 IWL  365 (474)
Q Consensus       363 vwi  365 (474)
                      ++|
T Consensus        81 iVi   83 (331)
T 1pzg_A           81 CVI   83 (331)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            766

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=92.79  E-value=0.065  Score=50.23  Aligned_cols=39  Identities=13%  Similarity=0.190  Sum_probs=33.1

Q ss_pred             EEEEeccCCCchhHHHHHHHHhcc--CcEEEe--cchhhHHHHHh
Q 011973          300 HVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~--~v~v~l--~~~~~~~~l~~  340 (474)
                      +|+|+||||  -||+++++.|.++  |.+|..  |+.++.+.++.
T Consensus         1 ~ilVtGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~   43 (286)
T 2zcu_A            1 MIAITGATG--QLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA   43 (286)
T ss_dssp             CEEEESTTS--HHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH
T ss_pred             CEEEEcCCc--hHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc
Confidence            489999999  9999999999988  888887  77777666654

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=92.78  E-value=0.18  Score=50.07  Aligned_cols=86  Identities=13%  Similarity=0.089  Sum_probs=54.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecc--c-cc-------CceeEE
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS--Y-AA-------HKTKIW  364 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~--~-~~-------~~~~vw  364 (474)
                      ..+.|+++|++|  -||.++++.+...|.+|..  +++++++.+++ ++.+.   .+..++  . ++       ..++++
T Consensus       162 ~g~~vlV~Ga~g--giG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~g~~~---~~~~~~~~~~~~~~~~~~~~~~d~v  235 (354)
T 2j8z_A          162 AGDYVLIHAGLS--GVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK-LGAAA---GFNYKKEDFSEATLKFTKGAGVNLI  235 (354)
T ss_dssp             TTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HTCSE---EEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             CCCEEEEECCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcE---EEecCChHHHHHHHHHhcCCCceEE
Confidence            456899999998  9999999999999999888  88888888743 33322   222221  1 11       245776


Q ss_pred             E--EcCcCChhhhhcCCCCceeeccc
Q 011973          365 L--VGDDLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       365 i--vg~~i~~~eq~~a~~G~~f~~~~  388 (474)
                      |  +|.....+-...+.+|-.++.+.
T Consensus       236 i~~~G~~~~~~~~~~l~~~G~iv~~G  261 (354)
T 2j8z_A          236 LDCIGGSYWEKNVNCLALDGRWVLYG  261 (354)
T ss_dssp             EESSCGGGHHHHHHHEEEEEEEEECC
T ss_pred             EECCCchHHHHHHHhccCCCEEEEEe
Confidence            6  44332223333445666666665

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=92.76  E-value=0.074  Score=49.98  Aligned_cols=33  Identities=21%  Similarity=0.265  Sum_probs=28.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ..+.|+++|++|++-||+++|+.|+++|.+|.+
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~   51 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAI   51 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEE
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEE
Confidence            467899999992228999999999999999988

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=92.70  E-value=0.1  Score=53.11  Aligned_cols=84  Identities=10%  Similarity=0.072  Sum_probs=58.1

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE-----
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-----  366 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv-----  366 (474)
                      -..++|.++|.-   .||+++|+.|...|.+|+.  |+....+..++. +.      ....++++  +.++++++     
T Consensus       162 l~gktvGIIG~G---~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~-g~------~~~~~l~ell~~aDvV~l~~Plt  231 (351)
T 3jtm_A          162 LEGKTIGTVGAG---RIGKLLLQRLKPFGCNLLYHDRLQMAPELEKET-GA------KFVEDLNEMLPKCDVIVINMPLT  231 (351)
T ss_dssp             STTCEEEEECCS---HHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHH-CC------EECSCHHHHGGGCSEEEECSCCC
T ss_pred             ccCCEEeEEEeC---HHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhC-CC------eEcCCHHHHHhcCCEEEECCCCC
Confidence            346789999965   9999999999999999988  443333333221 11      11224433  56766552     


Q ss_pred             ---cCcCChhhhhcCCCCceeecccc
Q 011973          367 ---GDDLTGKEQARAPKGTIFIPYTQ  389 (474)
Q Consensus       367 ---g~~i~~~eq~~a~~G~~f~~~~~  389 (474)
                         -..++.+....|++|+++|..+|
T Consensus       232 ~~t~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          232 EKTRGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             TTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             HHHHHhhcHHHHhcCCCCCEEEECcC
Confidence               12567888899999999999998

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=92.66  E-value=0.094  Score=50.68  Aligned_cols=39  Identities=15%  Similarity=0.179  Sum_probs=31.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  338 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l  338 (474)
                      .+.|+|+|++|  -||+++++.|.++|.+|..  |+.+..+++
T Consensus         5 ~~~vlVTGatG--fIG~~l~~~L~~~G~~V~~~~r~~~~~~~~   45 (337)
T 2c29_D            5 SETVCVTGASG--FIGSWLVMRLLERGYTVRATVRDPTNVKKV   45 (337)
T ss_dssp             -CEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCTTCHHHH
T ss_pred             CCEEEEECCch--HHHHHHHHHHHHCCCEEEEEECCcchhHHH
Confidence            35799999999  9999999999999999875  776644333

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=92.65  E-value=0.11  Score=50.46  Aligned_cols=41  Identities=15%  Similarity=0.133  Sum_probs=34.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  339 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~  339 (474)
                      +.+.++|+|+++  =||+|+|+.|+++|.+|.+  |++++.+.++
T Consensus         6 ~gKvalVTGas~--GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~   48 (258)
T 4gkb_A            6 QDKVVIVTGGAS--GIGGAISMRLAEERAIPVVFARHAPDGAFLD   48 (258)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCCCHHHHH
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEECCcccHHHHH
Confidence            457889999997  9999999999999999999  7766654443

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=92.60  E-value=0.15  Score=48.97  Aligned_cols=99  Identities=13%  Similarity=0.102  Sum_probs=65.9

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE--EcCc--CC
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD--LT  371 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--vg~~--i~  371 (474)
                      +|.++|. |  .+|+++|+.|.+.|.+|++  |++++.+.+++.       .+...++.++  ++++++|  +.+.  +.
T Consensus         3 ~I~iiG~-G--~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~~~~~~~~~~~~advvi~~v~~~~~~~   72 (287)
T 3pdu_A            3 TYGFLGL-G--IMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL-------GARQASSPAEVCAACDITIAMLADPAAAR   72 (287)
T ss_dssp             CEEEECC-S--TTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH-------TCEECSCHHHHHHHCSEEEECCSSHHHHH
T ss_pred             eEEEEcc-C--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-------CCeecCCHHHHHHcCCEEEEEcCCHHHHH
Confidence            6889995 5  9999999999999999999  889999988765       1111224432  5666655  3221  11


Q ss_pred             h-----hh-hhcCCCCceeecccccCccCC-------C-CCeeeecCCccc
Q 011973          372 G-----KE-QARAPKGTIFIPYTQIPPRKL-------R-KDCFYHSTPAMI  408 (474)
Q Consensus       372 ~-----~e-q~~a~~G~~f~~~~~v~p~~~-------R-~dc~y~~~~am~  408 (474)
                      .     ++ ...+++|+++++.+.++|...       + +.+.|...|.+.
T Consensus        73 ~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g  123 (287)
T 3pdu_A           73 EVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSG  123 (287)
T ss_dssp             HHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEEC
T ss_pred             HHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEECCccC
Confidence            1     11 124689999999999877611       1 456676666543

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=92.59  E-value=0.057  Score=53.13  Aligned_cols=103  Identities=13%  Similarity=0.182  Sum_probs=66.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE--Ec-----
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG-----  367 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--vg-----  367 (474)
                      ++|-++|--   .+|+.+|+.|.+.|.+|+.  |++++.+.|++.     +.  ....+..+  +.++++|  +.     
T Consensus         6 ~kIgfIGLG---~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-----G~--~~~~s~~e~~~~~dvvi~~l~~~~~~   75 (297)
T 4gbj_A            6 EKIAFLGLG---NLGTPIAEILLEAGYELVVWNRTASKAEPLTKL-----GA--TVVENAIDAITPGGIVFSVLADDAAV   75 (297)
T ss_dssp             CEEEEECCS---TTHHHHHHHHHHTTCEEEEC-------CTTTTT-----TC--EECSSGGGGCCTTCEEEECCSSHHHH
T ss_pred             CcEEEEecH---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc-----CC--eEeCCHHHHHhcCCceeeeccchhhH
Confidence            479999864   8999999999999999999  788877766543     11  11224432  5555544  22     


Q ss_pred             -CcCChhhhhcCCCCceeecccccCccCC-------C-CCeeeecCCccccCC
Q 011973          368 -DDLTGKEQARAPKGTIFIPYTQIPPRKL-------R-KDCFYHSTPAMIIPP  411 (474)
Q Consensus       368 -~~i~~~eq~~a~~G~~f~~~~~v~p~~~-------R-~dc~y~~~~am~vP~  411 (474)
                       +.+..+-...+++|.++++.|-++|...       + +.+.|.+.|.+--|.
T Consensus        76 ~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg~~  128 (297)
T 4gbj_A           76 EELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFARPE  128 (297)
T ss_dssp             HHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHH
T ss_pred             HHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCCcc
Confidence             2333334456799999999999998811       1 678899988865443

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=92.58  E-value=0.22  Score=51.25  Aligned_cols=87  Identities=16%  Similarity=0.177  Sum_probs=61.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeee---------------c------
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLS---------------T------  354 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~---------------t------  354 (474)
                      .++|+|+|+ |  .||.++++.|...|.+|++  ++.++++.+++ ++...-  .+..               .      
T Consensus       172 g~~V~ViGa-G--~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~-lGa~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~  245 (401)
T 1x13_A          172 PAKVMVIGA-G--VAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFL--ELDFKEEAGSGDGYAKVMSDAFIKAE  245 (401)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCGGGHHHHHH-TTCEEC--CC--------CCHHHHHHSHHHHHHH
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCEEE--EecccccccccccchhhccHHHHHHH
Confidence            468999997 6  8999999999999999888  77888887743 332210  0000               0      


Q ss_pred             --cccc--CceeEEEE-----c----CcCChhhhhcCCCCceeecccccC
Q 011973          355 --SYAA--HKTKIWLV-----G----DDLTGKEQARAPKGTIFIPYTQIP  391 (474)
Q Consensus       355 --~~~~--~~~~vwiv-----g----~~i~~~eq~~a~~G~~f~~~~~v~  391 (474)
                        ++++  +.+|++|.     |    ..++.+....|++|.++++++ .+
T Consensus       246 ~~~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva-~~  294 (401)
T 1x13_A          246 MELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA-AQ  294 (401)
T ss_dssp             HHHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT-GG
T ss_pred             HHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc-CC
Confidence              1222  45667662     3    336788999999999999999 44

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=92.58  E-value=0.079  Score=51.66  Aligned_cols=42  Identities=17%  Similarity=0.099  Sum_probs=34.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      ...|+|+|++|  -||+++++.|.++|.+|..  |+.++.+.+.++
T Consensus         9 ~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~   52 (357)
T 1rkx_A            9 GKRVFVTGHTG--FKGGWLSLWLQTMGATVKGYSLTAPTVPSLFET   52 (357)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHhCCCeEEEEeCCCcccchhhHh
Confidence            35799999999  9999999999999999988  766655555444

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=92.57  E-value=0.086  Score=48.25  Aligned_cols=33  Identities=21%  Similarity=0.353  Sum_probs=29.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      +.|+|+|++|  -||+++|+.|.++|.+|.+  |+.+
T Consensus         3 k~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~   37 (242)
T 1uay_A            3 RSALVTGGAS--GLGRAAALALKARGYRVVVLDLRRE   37 (242)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred             CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEccCcc
Confidence            5799999998  9999999999999999988  5543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=92.54  E-value=0.11  Score=48.78  Aligned_cols=31  Identities=19%  Similarity=0.275  Sum_probs=27.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ..+.|+|+|+++  -||+++|+.|+++|.+|.+
T Consensus         8 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~   38 (257)
T 3tl3_A            8 RDAVAVVTGGAS--GLGLATTKRLLDAGAQVVV   38 (257)
T ss_dssp             --CEEEEETTTS--HHHHHHHHHHHHHTCEEEE
T ss_pred             cCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEE
Confidence            356899999998  9999999999999999998

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=92.54  E-value=0.094  Score=51.75  Aligned_cols=45  Identities=20%  Similarity=0.170  Sum_probs=37.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-----------cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-----------ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-----------~~~~~~~~l~~~~~  343 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+           |+.++.+++.+++.
T Consensus         8 ~gk~~lVTGas~--GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~   63 (319)
T 1gz6_A            8 DGRVVLVTGAGG--GLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR   63 (319)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHH
Confidence            456899999998  9999999999999999987           35677777776654

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=92.53  E-value=0.07  Score=52.78  Aligned_cols=100  Identities=13%  Similarity=0.170  Sum_probs=68.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE--EcC----
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD----  368 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--vg~----  368 (474)
                      ++|-++|- |  ..|+++|+.|.+.|.+|+.  |++++.+.|+++=.       ....+.++  +.++++|  +-+    
T Consensus         4 ~kIgfIGl-G--~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga-------~~a~s~~e~~~~~dvv~~~l~~~~~v   73 (300)
T 3obb_A            4 KQIAFIGL-G--HMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGA-------SAARSARDAVQGADVVISMLPASQHV   73 (300)
T ss_dssp             CEEEEECC-S--TTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTC-------EECSSHHHHHTTCSEEEECCSCHHHH
T ss_pred             CEEEEeee-h--HHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCC-------EEcCCHHHHHhcCCceeecCCchHHH
Confidence            47889986 4  8999999999999999999  99999999877510       11223432  5666644  211    


Q ss_pred             --cCChh--hhhcCCCCceeecccccCcc-------CCC-CCeeeecCCccc
Q 011973          369 --DLTGK--EQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMI  408 (474)
Q Consensus       369 --~i~~~--eq~~a~~G~~f~~~~~v~p~-------~~R-~dc~y~~~~am~  408 (474)
                        .+..+  -...+++|.++||.|-++|.       .++ +.+.|.+-|+.-
T Consensus        74 ~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsG  125 (300)
T 3obb_A           74 EGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSG  125 (300)
T ss_dssp             HHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEES
T ss_pred             HHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCC
Confidence              11111  12357899999999999987       122 678898888754

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=92.52  E-value=0.16  Score=50.61  Aligned_cols=84  Identities=13%  Similarity=0.060  Sum_probs=57.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE-------
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  366 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv-------  366 (474)
                      .++|.++|. |  .||+++|+.|...|.+|+.  ++.++.+..++. .       +...++++  +.++++++       
T Consensus       155 g~~vgIIG~-G--~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~-g-------~~~~~l~e~l~~aDvVi~~vp~~~~  223 (330)
T 2gcg_A          155 QSTVGIIGL-G--RIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEF-Q-------AEFVSTPELAAQSDFIVVACSLTPA  223 (330)
T ss_dssp             TCEEEEECC-S--HHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTT-T-------CEECCHHHHHHHCSEEEECCCCCTT
T ss_pred             CCEEEEECc-C--HHHHHHHHHHHHCCCEEEEECCCCcchhHHHhc-C-------ceeCCHHHHHhhCCEEEEeCCCChH
Confidence            468999997 6  9999999999999999988  555555444321 1       11113432  56666552       


Q ss_pred             -cCcCChhhhhcCCCCceeecccccCc
Q 011973          367 -GDDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       367 -g~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                       ...++.+....+++|++++..++.++
T Consensus       224 t~~~i~~~~~~~mk~gailIn~srg~~  250 (330)
T 2gcg_A          224 TEGLCNKDFFQKMKETAVFINISRGDV  250 (330)
T ss_dssp             TTTCBSHHHHHHSCTTCEEEECSCGGG
T ss_pred             HHHhhCHHHHhcCCCCcEEEECCCCcc
Confidence             23344556678999999999998554

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=92.50  E-value=0.2  Score=48.99  Aligned_cols=86  Identities=17%  Similarity=0.167  Sum_probs=60.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE--EcCc--
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD--  369 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--vg~~--  369 (474)
                      ..+|.++|. |  .+|+++|+.|.+.|.+|++  |++++.+.+++. +      +...++.++  ++++++|  +.+.  
T Consensus        21 m~~I~iIG~-G--~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~-g------~~~~~~~~~~~~~aDvvi~~vp~~~~   90 (310)
T 3doj_A           21 MMEVGFLGL-G--IMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEH-G------ASVCESPAEVIKKCKYTIAMLSDPCA   90 (310)
T ss_dssp             SCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-T------CEECSSHHHHHHHCSEEEECCSSHHH
T ss_pred             CCEEEEECc-c--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-C------CeEcCCHHHHHHhCCEEEEEcCCHHH
Confidence            468999996 4  9999999999999999999  889999988754 1      111234432  5666655  3221  


Q ss_pred             CCh-----hh-hhcCCCCceeecccccCcc
Q 011973          370 LTG-----KE-QARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       370 i~~-----~e-q~~a~~G~~f~~~~~v~p~  393 (474)
                      +..     ++ ...+++|+++++.+.++|.
T Consensus        91 ~~~v~~~~~~l~~~l~~g~~vv~~st~~~~  120 (310)
T 3doj_A           91 ALSVVFDKGGVLEQICEGKGYIDMSTVDAE  120 (310)
T ss_dssp             HHHHHHSTTCGGGGCCTTCEEEECSCCCHH
T ss_pred             HHHHHhCchhhhhccCCCCEEEECCCCCHH
Confidence            111     11 1357899999999988776

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=92.48  E-value=0.063  Score=44.99  Aligned_cols=39  Identities=15%  Similarity=0.275  Sum_probs=32.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      ++|+++|+ |  .+|+.+|+.|.+.|.+|.+  +++++.+.+++
T Consensus         7 ~~v~I~G~-G--~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~   47 (144)
T 2hmt_A            7 KQFAVIGL-G--RFGGSIVKELHRMGHEVLAVDINEEKVNAYAS   47 (144)
T ss_dssp             CSEEEECC-S--HHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT
T ss_pred             CcEEEECC-C--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            46999998 8  9999999999999999888  67776665543

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=92.46  E-value=0.073  Score=51.26  Aligned_cols=38  Identities=11%  Similarity=0.151  Sum_probs=32.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  338 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l  338 (474)
                      .+|+|+|++|  -||+++++.|.++|.+|..  |+.++.+.+
T Consensus        14 M~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l   53 (342)
T 2x4g_A           14 VKYAVLGATG--LLGHHAARAIRAAGHDLVLIHRPSSQIQRL   53 (342)
T ss_dssp             CEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECTTSCGGGG
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEecChHhhhhh
Confidence            3799999999  9999999999999999988  766654433

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=92.44  E-value=0.35  Score=51.20  Aligned_cols=96  Identities=13%  Similarity=0.120  Sum_probs=66.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhcc-Cc-EEEe--cchh----hHHHHHhhC-cc---cc-----------ccceeeec
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQM-GI-KVAT--ICKD----DYEKLKLRI-PV---EA-----------QHNLVLST  354 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~-~v-~v~l--~~~~----~~~~l~~~~-~~---~~-----------~~~l~~~t  354 (474)
                      ..+|.|+|+-   .+|.++|..|++. |. +|++  ++++    +.+.|++.. +-   +.           ..++...+
T Consensus        18 ~mkIaVIGlG---~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~tt   94 (478)
T 3g79_A           18 IKKIGVLGMG---YVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTP   94 (478)
T ss_dssp             CCEEEEECCS---TTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEES
T ss_pred             CCEEEEECcC---HHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeC
Confidence            4589999986   8999999999999 99 9999  8888    999998742 11   11           22333233


Q ss_pred             cccc-CceeEEE--EcCcCChh---------------hh-hcCCCCceeecccccCccCCC
Q 011973          355 SYAA-HKTKIWL--VGDDLTGK---------------EQ-ARAPKGTIFIPYTQIPPRKLR  396 (474)
Q Consensus       355 ~~~~-~~~~vwi--vg~~i~~~---------------eq-~~a~~G~~f~~~~~v~p~~~R  396 (474)
                      +.++ ++++++|  |++..+++               .. ..+++|++++.-|-+||...|
T Consensus        95 d~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~  155 (478)
T 3g79_A           95 DFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTE  155 (478)
T ss_dssp             CGGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTT
T ss_pred             cHHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHH
Confidence            4344 6776655  66654321               11 247899999999989987333

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=92.41  E-value=0.096  Score=50.05  Aligned_cols=35  Identities=17%  Similarity=0.239  Sum_probs=29.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      +.+.|+|+|++|  -||+++|+.|.++|.+|..  |+.+
T Consensus        11 ~~~~vlVTGatG--~iG~~l~~~L~~~G~~V~~~~r~~~   47 (321)
T 2pk3_A           11 GSMRALITGVAG--FVGKYLANHLTEQNVEVFGTSRNNE   47 (321)
T ss_dssp             --CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred             CcceEEEECCCC--hHHHHHHHHHHHCCCEEEEEecCCc
Confidence            567899999999  9999999999999999988  5544

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=92.40  E-value=0.17  Score=47.83  Aligned_cols=83  Identities=14%  Similarity=0.249  Sum_probs=55.8

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEcCcCC--
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGDDLT--  371 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~-v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg~~i~--  371 (474)
                      .+|.++|+ |  .+|+++|+.|.+.|.+ |.+  |++++.++++++++-      ...++++ . ++++++|+--.-+  
T Consensus        11 m~i~iiG~-G--~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~Dvvi~av~~~~~   81 (266)
T 3d1l_A           11 TPIVLIGA-G--NLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEA------EYTTDLAEVNPYAKLYIVSLKDSAF   81 (266)
T ss_dssp             CCEEEECC-S--HHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTC------EEESCGGGSCSCCSEEEECCCHHHH
T ss_pred             CeEEEEcC-C--HHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCC------ceeCCHHHHhcCCCEEEEecCHHHH
Confidence            46999997 7  9999999999999988 666  888998888876431      1123443 2 6677766311000  


Q ss_pred             h---hhh-hcCCCCceeeccccc
Q 011973          372 G---KEQ-ARAPKGTIFIPYTQI  390 (474)
Q Consensus       372 ~---~eq-~~a~~G~~f~~~~~v  390 (474)
                      .   ++. ...++|+++++.+..
T Consensus        82 ~~v~~~l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           82 AELLQGIVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHHHHHHHTTCCTTCEEEECCTT
T ss_pred             HHHHHHHHhhcCCCcEEEECCCC
Confidence            0   111 235689999999873

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=92.37  E-value=0.068  Score=52.96  Aligned_cols=63  Identities=14%  Similarity=0.129  Sum_probs=42.1

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccc-----cccceeeec-cccc-CceeEEEE
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLST-SYAA-HKTKIWLV  366 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~t-~~~~-~~~~vwiv  366 (474)
                      +|.++|| |  .+|.++|..|++.|.  ++.|  +++++.+....++...     ...+ +..+ ++++ ++++++|+
T Consensus         2 kI~ViGa-G--~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~-i~~t~d~~a~~~aDiVVi   75 (294)
T 1oju_A            2 KLGFVGA-G--RVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPK-IVGGADYSLLKGSEIIVV   75 (294)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCE-EEEESCGGGGTTCSEEEE
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCE-EEEeCCHHHhCCCCEEEE
Confidence            6899999 8  999999999998888  8888  7777765322221111     1122 3333 4455 88888665

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=92.20  E-value=0.1  Score=49.79  Aligned_cols=31  Identities=23%  Similarity=0.214  Sum_probs=28.2

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cch
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  332 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~  332 (474)
                      +|+|+|+||  =||+++++.|.++|.+|+.  |+.
T Consensus         2 kILVTGatG--fIG~~L~~~L~~~G~~V~~l~R~~   34 (298)
T 4b4o_A            2 RVLVGGGTG--FIGTALTQLLNARGHEVTLVSRKP   34 (298)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             EEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCC
Confidence            599999999  9999999999999999988  543

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=92.20  E-value=0.13  Score=50.13  Aligned_cols=99  Identities=18%  Similarity=0.211  Sum_probs=66.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE--cCc--
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDD--  369 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv--g~~--  369 (474)
                      ..+|.++|. |  .+|+++|+.|.+.|.+|++  |++++.+.+++.       .+...++.++  + ++++|+  .+.  
T Consensus        15 ~~~I~vIG~-G--~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~~~~~~~~~~~-aDvvi~~vp~~~~   83 (296)
T 3qha_A           15 QLKLGYIGL-G--NMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA-------GATLADSVADVAA-ADLIHITVLDDAQ   83 (296)
T ss_dssp             CCCEEEECC-S--TTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT-------TCEECSSHHHHTT-SSEEEECCSSHHH
T ss_pred             CCeEEEECc-C--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-------CCEEcCCHHHHHh-CCEEEEECCChHH
Confidence            357999995 5  9999999999999999999  889998888765       1122234443  5 777552  211  


Q ss_pred             CC---hhhhhcCCCCceeecccccCccC-------CC-CCeeeecCCcc
Q 011973          370 LT---GKEQARAPKGTIFIPYTQIPPRK-------LR-KDCFYHSTPAM  407 (474)
Q Consensus       370 i~---~~eq~~a~~G~~f~~~~~v~p~~-------~R-~dc~y~~~~am  407 (474)
                      +.   .+-...+++|+++++.+.++|..       ++ +.+.|...|.+
T Consensus        84 ~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~  132 (296)
T 3qha_A           84 VREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVS  132 (296)
T ss_dssp             HHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEE
T ss_pred             HHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCc
Confidence            10   11123478999999999887761       11 45667666654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=92.20  E-value=0.097  Score=45.72  Aligned_cols=40  Identities=13%  Similarity=0.255  Sum_probs=34.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  339 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~  339 (474)
                      ...+|+++|+ |  .+|+.+|+.|.+.|.+|++  +++++.+.++
T Consensus        18 ~~~~v~IiG~-G--~iG~~la~~L~~~g~~V~vid~~~~~~~~~~   59 (155)
T 2g1u_A           18 KSKYIVIFGC-G--RLGSLIANLASSSGHSVVVVDKNEYAFHRLN   59 (155)
T ss_dssp             CCCEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCGGGGGGSC
T ss_pred             CCCcEEEECC-C--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            4578999997 7  9999999999999999988  7778776654

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=92.19  E-value=0.3  Score=50.35  Aligned_cols=110  Identities=15%  Similarity=0.234  Sum_probs=69.7

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC-cc-cc-----------ccceeeecccc-c-Ccee
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI-PV-EA-----------QHNLVLSTSYA-A-HKTK  362 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~-~~-~~-----------~~~l~~~t~~~-~-~~~~  362 (474)
                      +|.++|+ |  .+|.++|..|++.|.+|++  +++++.+.+++.. +- +.           ..++...++++ + ++++
T Consensus         2 kI~VIG~-G--~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD   78 (436)
T 1mv8_A            2 RISIFGL-G--YVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD   78 (436)
T ss_dssp             EEEEECC-S--TTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred             EEEEECC-C--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence            5889995 6  9999999999999999998  8899999998751 11 00           11222333554 3 6676


Q ss_pred             EEE--EcCcCCh-------------hhhh-cCCC---CceeecccccCccC----C----------C--CCeeeecCCcc
Q 011973          363 IWL--VGDDLTG-------------KEQA-RAPK---GTIFIPYTQIPPRK----L----------R--KDCFYHSTPAM  407 (474)
Q Consensus       363 vwi--vg~~i~~-------------~eq~-~a~~---G~~f~~~~~v~p~~----~----------R--~dc~y~~~~am  407 (474)
                      ++|  |++..++             ++.. .+++   |++++..|.++|..    +          +  .|+.+..+|..
T Consensus        79 vviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~~Pe~  158 (436)
T 1mv8_A           79 VSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEF  158 (436)
T ss_dssp             EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEEECCCC
T ss_pred             EEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEEEEECccc
Confidence            655  5544320             1111 2467   99999888777642    1          1  35555566666


Q ss_pred             ccCCC
Q 011973          408 IIPPS  412 (474)
Q Consensus       408 ~vP~~  412 (474)
                      .-|+.
T Consensus       159 ~~~G~  163 (436)
T 1mv8_A          159 LREST  163 (436)
T ss_dssp             CCTTS
T ss_pred             ccccc
Confidence            55554

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=92.18  E-value=0.075  Score=50.25  Aligned_cols=33  Identities=12%  Similarity=0.219  Sum_probs=29.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      +.|+|+||+|  -||+++|+.|.++|.+|.+  |+++
T Consensus         4 k~vlVTGasg--~IG~~la~~L~~~G~~V~~~~r~~~   38 (267)
T 3rft_A            4 KRLLVTGAAG--QLGRVMRERLAPMAEILRLADLSPL   38 (267)
T ss_dssp             EEEEEESTTS--HHHHHHHHHTGGGEEEEEEEESSCC
T ss_pred             CEEEEECCCC--HHHHHHHHHHHhcCCEEEEEecCCc
Confidence            5799999999  9999999999999999988  6554

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=92.14  E-value=0.095  Score=50.65  Aligned_cols=37  Identities=22%  Similarity=0.408  Sum_probs=32.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  336 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~  336 (474)
                      -+.++|+|+++  -||+|+|+.|+++|.+|.+  |++++++
T Consensus        11 GK~alVTGas~--GIG~aia~~la~~Ga~Vv~~~~~~~~~~   49 (242)
T 4b79_A           11 GQQVLVTGGSS--GIGAAIAMQFAELGAEVVALGLDADGVH   49 (242)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSTTSTT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHh
Confidence            46899999997  9999999999999999999  7766544

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=92.12  E-value=0.84  Score=44.85  Aligned_cols=94  Identities=13%  Similarity=0.144  Sum_probs=58.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC-cc---ccccceeeeccccc-CceeEEEE--cC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI-PV---EAQHNLVLSTSYAA-HKTKIWLV--GD  368 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~-~~---~~~~~l~~~t~~~~-~~~~vwiv--g~  368 (474)
                      .-+|.++|+-   .+|+++|..|.+.|.+|++  |++++.+.|+++- ..   +...++...++.++ ++++++|+  -.
T Consensus        14 ~~kI~iIG~G---~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~aDvVil~vk~   90 (335)
T 1z82_A           14 EMRFFVLGAG---SWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEEIKKEDILVIAIPV   90 (335)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGGCCTTEEEEECSCG
T ss_pred             CCcEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHHhcCCCEEEEECCH
Confidence            3578999976   8999999999999999998  8889999998762 11   11011111223333 56677653  11


Q ss_pred             cCChhhhhcC-CCCceeecccc-cCccC
Q 011973          369 DLTGKEQARA-PKGTIFIPYTQ-IPPRK  394 (474)
Q Consensus       369 ~i~~~eq~~a-~~G~~f~~~~~-v~p~~  394 (474)
                      .-.++=...+ |+|+++++.+. +++..
T Consensus        91 ~~~~~v~~~l~~~~~~vv~~~nGi~~~~  118 (335)
T 1z82_A           91 QYIREHLLRLPVKPSMVLNLSKGIEIKT  118 (335)
T ss_dssp             GGHHHHHTTCSSCCSEEEECCCCCCTTT
T ss_pred             HHHHHHHHHhCcCCCEEEEEeCCCCCCc
Confidence            1111111111 27899999985 77653

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=92.11  E-value=0.28  Score=47.37  Aligned_cols=92  Identities=25%  Similarity=0.292  Sum_probs=59.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc------------------cceeeecccc-
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ------------------HNLVLSTSYA-  357 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~------------------~~l~~~t~~~-  357 (474)
                      ++|.++|+ |  .+|+++|..|++.|.+|++  +++++.+++++++.....                  ..+...++++ 
T Consensus         5 ~kV~VIGa-G--~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~   81 (283)
T 4e12_A            5 TNVTVLGT-G--VLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQ   81 (283)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHH
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHH
Confidence            58999998 5  8999999999999999999  888888888765321100                  1112233554 


Q ss_pred             c-CceeEEE--EcCcCChh-----hh-hcCCCCceeecccc-cCcc
Q 011973          358 A-HKTKIWL--VGDDLTGK-----EQ-ARAPKGTIFIPYTQ-IPPR  393 (474)
Q Consensus       358 ~-~~~~vwi--vg~~i~~~-----eq-~~a~~G~~f~~~~~-v~p~  393 (474)
                      + ++++++|  |.+.++.+     ++ ..+++|++++..+. +|+.
T Consensus        82 ~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~  127 (283)
T 4e12_A           82 AVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPS  127 (283)
T ss_dssp             HTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH
T ss_pred             HhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence            3 7787766  33321111     11 24789999986543 5443

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=92.08  E-value=0.083  Score=51.81  Aligned_cols=40  Identities=15%  Similarity=0.203  Sum_probs=33.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhcc-CcEEEe--cchhhHHHHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLK  339 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l--~~~~~~~~l~  339 (474)
                      .++|+|+|+||  -||+++++.|.++ |.+|..  |+.++.+.+.
T Consensus        24 ~~~vlVtGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~   66 (372)
T 3slg_A           24 AKKVLILGVNG--FIGHHLSKRILETTDWEVFGMDMQTDRLGDLV   66 (372)
T ss_dssp             CCEEEEESCSS--HHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc
Confidence            46899999999  9999999999987 899888  7776655443

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=92.05  E-value=0.11  Score=50.09  Aligned_cols=36  Identities=19%  Similarity=0.221  Sum_probs=29.8

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      +-..+|+|+|++|  -||+++++.|.++|.+|..  |+.+
T Consensus        12 ~~~~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~r~~~   49 (335)
T 1rpn_A           12 SMTRSALVTGITG--QDGAYLAKLLLEKGYRVHGLVARRS   49 (335)
T ss_dssp             ---CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             ccCCeEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCCCc
Confidence            3567899999999  9999999999999999988  5544

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=91.98  E-value=0.2  Score=50.03  Aligned_cols=66  Identities=18%  Similarity=0.212  Sum_probs=44.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cc--hhhHHHHHhhCccc-----cccceeeec-cccc-CceeEE
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC--KDDYEKLKLRIPVE-----AQHNLVLST-SYAA-HKTKIW  364 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~--~~~~~~l~~~~~~~-----~~~~l~~~t-~~~~-~~~~vw  364 (474)
                      ...+|.++|+ |  .+|+++|..|++.|. .|.+  ++  +++.+-...++...     .... +..+ +|++ ++++++
T Consensus         7 ~~~kv~ViGa-G--~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~-i~~t~d~~a~~~aDvV   82 (315)
T 3tl2_A            7 KRKKVSVIGA-G--FTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDAN-IIGTSDYADTADSDVV   82 (315)
T ss_dssp             CCCEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCC-EEEESCGGGGTTCSEE
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCE-EEEcCCHHHhCCCCEE
Confidence            3468999997 7  999999999999999 8888  55  45555444333221     1122 3333 5666 888886


Q ss_pred             EE
Q 011973          365 LV  366 (474)
Q Consensus       365 iv  366 (474)
                      |+
T Consensus        83 Ii   84 (315)
T 3tl2_A           83 VI   84 (315)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=91.96  E-value=0.08  Score=50.58  Aligned_cols=37  Identities=22%  Similarity=0.276  Sum_probs=31.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhH
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  335 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~  335 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.
T Consensus        27 ~gk~vlVTGas~--gIG~aia~~la~~G~~V~~~~r~~~~~   65 (266)
T 3uxy_A           27 EGKVALVTGAAG--GIGGAVVTALRAAGARVAVADRAVAGI   65 (266)
T ss_dssp             TTCEEEESSTTS--HHHHHHHHHHHHTTCEEEECSSCCTTS
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            457899999998  9999999999999999999  665543

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=91.92  E-value=0.31  Score=48.93  Aligned_cols=67  Identities=19%  Similarity=0.209  Sum_probs=45.0

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHH----HHhhCccc-cccceeeeccccc-CceeEEE
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEK----LKLRIPVE-AQHNLVLSTSYAA-HKTKIWL  365 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~----l~~~~~~~-~~~~l~~~t~~~~-~~~~vwi  365 (474)
                      +...+|.++|+ |  .||+++|..|++.|.  ++.+  +++++.+.    |+...+.- .... +..+.+++ ++++++|
T Consensus         3 ~~~~kI~ViGa-G--~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~-i~~~~~~a~~~aDvVv   78 (326)
T 3pqe_A            3 KHVNKVALIGA-G--FVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVK-TSYGTYEDCKDADIVC   78 (326)
T ss_dssp             CSCCEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCE-EEEECGGGGTTCSEEE
T ss_pred             CCCCEEEEECC-C--HHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeE-EEeCcHHHhCCCCEEE
Confidence            34568999997 7  999999999998887  7777  77777776    44432221 1112 22234555 8888866


Q ss_pred             E
Q 011973          366 V  366 (474)
Q Consensus       366 v  366 (474)
                      +
T Consensus        79 i   79 (326)
T 3pqe_A           79 I   79 (326)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=91.91  E-value=0.11  Score=49.46  Aligned_cols=36  Identities=8%  Similarity=0.150  Sum_probs=31.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++
T Consensus        27 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~   64 (260)
T 3un1_A           27 QQKVVVITGASQ--GIGAGLVRAYRDRNYRVVATSRSIKP   64 (260)
T ss_dssp             TCCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            457899999998  9999999999999999998  65543

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=91.89  E-value=0.2  Score=47.99  Aligned_cols=84  Identities=13%  Similarity=0.197  Sum_probs=56.8

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE--cCcC--
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDDL--  370 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv--g~~i--  370 (474)
                      .+|.++| .|  .+|+++|+.|.+.|.+|.+  |++++.+.++++   +    +...+++++  ++++++|+  .+.-  
T Consensus         6 m~i~iiG-~G--~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~---g----~~~~~~~~~~~~~~D~vi~~v~~~~~~   75 (299)
T 1vpd_A            6 MKVGFIG-LG--IMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA---G----AETASTAKAIAEQCDVIITMLPNSPHV   75 (299)
T ss_dssp             CEEEEEC-CS--TTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT---T----CEECSSHHHHHHHCSEEEECCSSHHHH
T ss_pred             ceEEEEC-ch--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC---C----CeecCCHHHHHhCCCEEEEECCCHHHH
Confidence            3799999 46  9999999999999999988  888888888765   1    111224432  56666553  2111  


Q ss_pred             Ch-----hhh-hcCCCCceeecccccCc
Q 011973          371 TG-----KEQ-ARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       371 ~~-----~eq-~~a~~G~~f~~~~~v~p  392 (474)
                      +.     ++. ..+++|+++++.+..++
T Consensus        76 ~~~~~~~~~l~~~l~~~~~vv~~s~~~~  103 (299)
T 1vpd_A           76 KEVALGENGIIEGAKPGTVLIDMSSIAP  103 (299)
T ss_dssp             HHHHHSTTCHHHHCCTTCEEEECSCCCH
T ss_pred             HHHHhCcchHhhcCCCCCEEEECCCCCH
Confidence            10     111 24689999999987665

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=91.82  E-value=0.13  Score=49.16  Aligned_cols=29  Identities=21%  Similarity=0.224  Sum_probs=27.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ++|+|+|++|  -||+++++.|.++|.+|..
T Consensus         3 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~   31 (315)
T 2ydy_A            3 RRVLVTGATG--LLGRAVHKEFQQNNWHAVG   31 (315)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHTTTCEEEE
T ss_pred             CeEEEECCCc--HHHHHHHHHHHhCCCeEEE
Confidence            5799999999  9999999999999999987

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=91.81  E-value=0.12  Score=49.19  Aligned_cols=35  Identities=23%  Similarity=0.342  Sum_probs=30.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++
T Consensus         8 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~   44 (264)
T 2dtx_A            8 DKVVIVTGASM--GIGRAIAERFVDEGSKVIDLSIHDPG   44 (264)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEecCccc
Confidence            46799999998  9999999999999999988  65543

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=91.81  E-value=0.13  Score=48.29  Aligned_cols=34  Identities=21%  Similarity=0.228  Sum_probs=30.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+++
T Consensus         7 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~   42 (250)
T 2fwm_X            7 GKNVWVTGAGK--GIGYATALAFVEAGAKVTGFDQAFT   42 (250)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCCC
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCchh
Confidence            46799999998  9999999999999999988  6544

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=91.81  E-value=0.086  Score=51.07  Aligned_cols=35  Identities=23%  Similarity=0.348  Sum_probs=29.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      ..+.|+|+||+|  -||+++++.|.++|.+|..  |+.+
T Consensus        18 ~~~~vlVtGatG--~iG~~l~~~L~~~G~~V~~~~r~~~   54 (347)
T 4id9_A           18 GSHMILVTGSAG--RVGRAVVAALRTQGRTVRGFDLRPS   54 (347)
T ss_dssp             ---CEEEETTTS--HHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHhCCCEEEEEeCCCC
Confidence            467899999999  9999999999999999988  5543

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=91.79  E-value=0.16  Score=50.95  Aligned_cols=90  Identities=17%  Similarity=0.174  Sum_probs=54.4

Q ss_pred             CcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecc---ccc--CceeEEE-
Q 011973          294 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS---YAA--HKTKIWL-  365 (474)
Q Consensus       294 ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~---~~~--~~~~vwi-  365 (474)
                      ++..+-+|+|.|| |  .||+.+|++|++. .+|.+  ++.++++++++.+..-.    +.+++   +++  ++++++| 
T Consensus        12 ~~g~~mkilvlGa-G--~vG~~~~~~L~~~-~~v~~~~~~~~~~~~~~~~~~~~~----~d~~d~~~l~~~~~~~DvVi~   83 (365)
T 3abi_A           12 IEGRHMKVLILGA-G--NIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLK----VDASNFDKLVEVMKEFELVIG   83 (365)
T ss_dssp             ----CCEEEEECC-S--HHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEE----CCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccCCccEEEEECC-C--HHHHHHHHHHhcC-CCeEEEEcCHHHHHHHhccCCcEE----EecCCHHHHHHHHhCCCEEEE
Confidence            4445668999999 8  9999999999854 57777  89999998876543211    22222   222  6777777 


Q ss_pred             -EcCcCChhh-hhcCCCCceeecccccC
Q 011973          366 -VGDDLTGKE-QARAPKGTIFIPYTQIP  391 (474)
Q Consensus       366 -vg~~i~~~e-q~~a~~G~~f~~~~~v~  391 (474)
                       ++-.....= ..-+..|++++|.+-.+
T Consensus        84 ~~p~~~~~~v~~~~~~~g~~yvD~s~~~  111 (365)
T 3abi_A           84 ALPGFLGFKSIKAAIKSKVDMVDVSFMP  111 (365)
T ss_dssp             CCCGGGHHHHHHHHHHHTCEEEECCCCS
T ss_pred             ecCCcccchHHHHHHhcCcceEeeeccc
Confidence             322211110 01235688888888433

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=91.78  E-value=0.12  Score=46.23  Aligned_cols=35  Identities=17%  Similarity=0.101  Sum_probs=30.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDD  334 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~  334 (474)
                      .++|+|+|++|  -||+++++.|.++|.  +|..  |++++
T Consensus         5 ~~~vlVtGatG--~iG~~l~~~l~~~g~~~~V~~~~r~~~~   43 (215)
T 2a35_A            5 PKRVLLAGATG--LTGEHLLDRILSEPTLAKVIAPARKALA   43 (215)
T ss_dssp             CCEEEEECTTS--HHHHHHHHHHHHCTTCCEEECCBSSCCC
T ss_pred             CceEEEECCCc--HHHHHHHHHHHhCCCCCeEEEEeCCCcc
Confidence            35799999999  999999999999998  8888  66553

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=91.75  E-value=0.13  Score=48.96  Aligned_cols=32  Identities=22%  Similarity=0.182  Sum_probs=28.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-ch
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CK  332 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~  332 (474)
                      ++|+|+||+|  -||+++++.|.++|.+|..  | +.
T Consensus         2 k~vlVTGatG--~iG~~l~~~L~~~G~~V~~~~r~~~   36 (322)
T 2p4h_X            2 GRVCVTGGTG--FLGSWIIKSLLENGYSVNTTIRADP   36 (322)
T ss_dssp             CEEEEESTTS--HHHHHHHHHHHHTTCEEEEECCCC-
T ss_pred             CEEEEECChh--HHHHHHHHHHHHCCCEEEEEEeCCc
Confidence            5799999999  9999999999999999986  6 54

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=91.75  E-value=0.33  Score=48.12  Aligned_cols=87  Identities=15%  Similarity=0.158  Sum_probs=56.0

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecc--cc-c------CceeEE
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS--YA-A------HKTKIW  364 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~--~~-~------~~~~vw  364 (474)
                      +..+.|+++|++|  -||.++++.+...|.+|+.  +++++++.+++ ++...   .+..++  .. +      ...+++
T Consensus       166 ~~g~~VlV~Gg~g--~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~---~~~~~~~~~~~~~~~~~~~g~Dvv  239 (353)
T 4dup_A          166 TEGESVLIHGGTS--GIGTTAIQLARAFGAEVYATAGSTGKCEACER-LGAKR---GINYRSEDFAAVIKAETGQGVDII  239 (353)
T ss_dssp             CTTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCSE---EEETTTSCHHHHHHHHHSSCEEEE
T ss_pred             CCCCEEEEEcCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCCE---EEeCCchHHHHHHHHHhCCCceEE
Confidence            3467899999998  9999999999999999988  78999888765 33322   232221  11 1      245776


Q ss_pred             E--EcCcCChhhhhcCCCCceeeccc
Q 011973          365 L--VGDDLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       365 i--vg~~i~~~eq~~a~~G~~f~~~~  388 (474)
                      |  +|...-..-...+.+|-.++-+.
T Consensus       240 id~~g~~~~~~~~~~l~~~G~iv~~g  265 (353)
T 4dup_A          240 LDMIGAAYFERNIASLAKDGCLSIIA  265 (353)
T ss_dssp             EESCCGGGHHHHHHTEEEEEEEEECC
T ss_pred             EECCCHHHHHHHHHHhccCCEEEEEE
Confidence            6  55433333334445555566555

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=91.71  E-value=0.13  Score=47.17  Aligned_cols=30  Identities=13%  Similarity=0.118  Sum_probs=28.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+
T Consensus         6 ~k~vlVTGas~--gIG~~~a~~l~~~G~~V~~   35 (223)
T 3uce_A            6 KTVYVVLGGTS--GIGAELAKQLESEHTIVHV   35 (223)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHCSTTEEEEE
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEE
Confidence            46789999998  9999999999999999998

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=91.71  E-value=0.13  Score=49.38  Aligned_cols=34  Identities=18%  Similarity=0.168  Sum_probs=30.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      +.|+|+|++|  -||+++|+.|.++|.+|..  |+.++
T Consensus         4 ~~vlVtGatG--~iG~~l~~~L~~~G~~V~~~~r~~~~   39 (345)
T 2z1m_A            4 KRALITGIRG--QDGAYLAKLLLEKGYEVYGADRRSGE   39 (345)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEECSCCST
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            5799999999  9999999999999999988  66544

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=91.47  E-value=0.25  Score=50.49  Aligned_cols=144  Identities=17%  Similarity=0.209  Sum_probs=81.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc---CceeEEE---EcC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA---HKTKIWL---VGD  368 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~---~~~~vwi---vg~  368 (474)
                      .-++|.|.|. |  .||+.+|+.|.+.|.+|++  .+.++ ++..++.+.+.    +   +.++   .+++|.+   .+.
T Consensus       174 ~GktV~I~G~-G--nVG~~~A~~l~~~GakVvvsD~~~~~-~~~a~~~ga~~----v---~~~ell~~~~DIliP~A~~~  242 (355)
T 1c1d_A          174 DGLTVLVQGL-G--AVGGSLASLAAEAGAQLLVADTDTER-VAHAVALGHTA----V---ALEDVLSTPCDVFAPCAMGG  242 (355)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHTTCEE----C---CGGGGGGCCCSEEEECSCSC
T ss_pred             CCCEEEEECc-C--HHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHhcCCEE----e---ChHHhhcCccceecHhHHHh
Confidence            4579999997 5  9999999999999999999  44444 34444332111    1   2211   3667766   455


Q ss_pred             cCChhhhhcCCCCceeecccccCccCCCCCeeeecCCccccCCCCccccccccccCcchhHHHHHhhhhh-h-hc--CCC
Q 011973          369 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH-A-LE--GWD  444 (474)
Q Consensus       369 ~i~~~eq~~a~~G~~f~~~~~v~p~~~R~dc~y~~~~am~vP~~~~~~~~~e~~~prr~~~Ac~a~~~v~-a-lE--gw~  444 (474)
                      .|+.++...++ ..+++--++-|...-.-+=...+.+.+-+|+-                 ++-|+|++- . ||  +|+
T Consensus       243 ~I~~~~~~~lk-~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd~-----------------~aNaGGV~~s~~~E~~~w~  304 (355)
T 1c1d_A          243 VITTEVARTLD-CSVVAGAANNVIADEAASDILHARGILYAPDF-----------------VANAGGAIHLVGREVLGWS  304 (355)
T ss_dssp             CBCHHHHHHCC-CSEECCSCTTCBCSHHHHHHHHHTTCEECCHH-----------------HHTTHHHHHHHHHHTTCCC
T ss_pred             hcCHHHHhhCC-CCEEEECCCCCCCCHHHHHHHHhCCEEEECCe-----------------EEcCCCeeeeeeehhcCCC
Confidence            66777665553 33444443211100000000112222223322                 245566663 3 55  888


Q ss_pred             CCccch-h---hhhHHHHHHHHHhCCCcc
Q 011973          445 LNECGQ-T---MCDIHQVWHASLRHGFRP  469 (474)
Q Consensus       445 ~~e~G~-i---v~~id~iw~aa~kHGF~p  469 (474)
                      +.|+-+ +   ++..++||+.|.++|-.+
T Consensus       305 ~e~v~~~l~~i~~~~~~i~~~~~~~~~~~  333 (355)
T 1c1d_A          305 ESVVHERAVAIGDTLNQVFEISDNDGVTP  333 (355)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHTCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCcCH
Confidence            887665 3   456679999999998644

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=91.46  E-value=0.13  Score=48.81  Aligned_cols=34  Identities=18%  Similarity=0.248  Sum_probs=30.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      .++|+|+|+||  -||+++++.|.++|.+|..  |+.+
T Consensus         7 ~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            7 KHRILITGGAG--FIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             CCeEEEECCCC--hHHHHHHHHHHHCCCEEEEEecCCc
Confidence            46899999999  9999999999999999988  5443

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=91.45  E-value=0.14  Score=48.35  Aligned_cols=32  Identities=13%  Similarity=0.283  Sum_probs=28.5

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +-.++|+|+|+||  -||+++++.|.++|.+|..
T Consensus        10 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~   41 (292)
T 1vl0_A           10 HHHMKILITGANG--QLGREIQKQLKGKNVEVIP   41 (292)
T ss_dssp             --CEEEEEESTTS--HHHHHHHHHHTTSSEEEEE
T ss_pred             cccceEEEECCCC--hHHHHHHHHHHhCCCeEEe
Confidence            3567999999999  9999999999999999987

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=91.43  E-value=0.12  Score=49.56  Aligned_cols=36  Identities=22%  Similarity=0.256  Sum_probs=30.9

Q ss_pred             EEEEeccCCCchhHHHHHHHHhcc-CcEEEe--cchhhHHH
Q 011973          300 HVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEK  337 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~-~v~v~l--~~~~~~~~  337 (474)
                      +|+|+|++|  -||+++++.|.++ |.+|..  |+.++.+.
T Consensus         2 ~vlVtGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~   40 (345)
T 2bll_A            2 RVLILGVNG--FIGNHLTERLLREDHYEVYGLDIGSDAISR   40 (345)
T ss_dssp             EEEEETCSS--HHHHHHHHHHHHSTTCEEEEEESCCGGGGG
T ss_pred             eEEEECCCc--HHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Confidence            699999999  9999999999987 899887  77665543

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=91.43  E-value=0.15  Score=52.74  Aligned_cols=37  Identities=16%  Similarity=0.156  Sum_probs=31.7

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhcc---CcEEEe--cchhh
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQM---GIKVAT--ICKDD  334 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~---~v~v~l--~~~~~  334 (474)
                      ...+.|+|+||||  -||+++|+.|.++   |.+|.+  |+++.
T Consensus        71 ~~~~~VLVTGatG--~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~  112 (478)
T 4dqv_A           71 PELRTVLLTGATG--FLGRYLVLELLRRLDVDGRLICLVRAESD  112 (478)
T ss_dssp             SCCCEEEEECTTS--HHHHHHHHHHHHHSCTTCEEEEEECSSSH
T ss_pred             CCCCEEEEECCCc--HHHHHHHHHHHhcCCCCCEEEEEECCCCc
Confidence            3567999999999  9999999999988   889988  66543

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=91.29  E-value=0.28  Score=48.92  Aligned_cols=64  Identities=13%  Similarity=0.229  Sum_probs=44.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccc-----cccceeee-ccccc-CceeEEEE
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  366 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~-t~~~~-~~~~vwiv  366 (474)
                      .+|.|+|| |  .+|.++|..|++.|. +|.|  +++++++.....+...     ...+ +.. +++++ ++++++|.
T Consensus        15 ~kI~ViGa-G--~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~-i~~t~d~~al~~aD~VI~   88 (328)
T 2hjr_A           15 KKISIIGA-G--QIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAK-IFGENNYEYLQNSDVVII   88 (328)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCC-EEEESCGGGGTTCSEEEE
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCE-EEECCCHHHHCCCCEEEE
Confidence            58999999 7  999999999999998 8888  7887777533222211     1122 334 45655 88877663

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=91.22  E-value=0.48  Score=46.70  Aligned_cols=87  Identities=15%  Similarity=0.185  Sum_probs=54.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cch---hhHHHHHhhCccccccceeeec-ccc-c-CceeEEE--Ec
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICK---DDYEKLKLRIPVEAQHNLVLST-SYA-A-HKTKIWL--VG  367 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~---~~~~~l~~~~~~~~~~~l~~~t-~~~-~-~~~~vwi--vg  367 (474)
                      .+|.++|. |  .+|.++|+.|.+.| .+|++  |++   ++.++..+++...-   +  .+ +.+ . ++++++|  |.
T Consensus        25 m~IgvIG~-G--~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g---~--~~~s~~e~~~~aDvVi~avp   96 (317)
T 4ezb_A           25 TTIAFIGF-G--EAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELG---V--EPLDDVAGIACADVVLSLVV   96 (317)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTT---C--EEESSGGGGGGCSEEEECCC
T ss_pred             CeEEEECc-c--HHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCC---C--CCCCHHHHHhcCCEEEEecC
Confidence            57999995 5  99999999999999 99998  665   22222222211111   1  23 443 3 6676655  32


Q ss_pred             CcCChh---h-hhcCCCCceeecccccCcc
Q 011973          368 DDLTGK---E-QARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       368 ~~i~~~---e-q~~a~~G~~f~~~~~v~p~  393 (474)
                      +....+   + ...+++|+++++.+.++|.
T Consensus        97 ~~~~~~~~~~i~~~l~~~~ivv~~st~~p~  126 (317)
T 4ezb_A           97 GAATKAVAASAAPHLSDEAVFIDLNSVGPD  126 (317)
T ss_dssp             GGGHHHHHHHHGGGCCTTCEEEECCSCCHH
T ss_pred             CHHHHHHHHHHHhhcCCCCEEEECCCCCHH
Confidence            222211   1 2246899999999988776

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=91.21  E-value=0.22  Score=50.55  Aligned_cols=86  Identities=10%  Similarity=0.097  Sum_probs=58.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--Cce---eEEE--EcC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKT---KIWL--VGD  368 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~---~vwi--vg~  368 (474)
                      ..+|.++|. |  .+|+++|+.|.+.|.+|++  |++++.+.++++       .+...++.++  +.+   +++|  |.+
T Consensus        22 ~mkIgiIGl-G--~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~-------g~~~~~s~~e~~~~a~~~DvVi~~vp~   91 (358)
T 4e21_A           22 SMQIGMIGL-G--RMGADMVRRLRKGGHECVVYDLNVNAVQALERE-------GIAGARSIEEFCAKLVKPRVVWLMVPA   91 (358)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-------TCBCCSSHHHHHHHSCSSCEEEECSCG
T ss_pred             CCEEEEECc-h--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-------CCEEeCCHHHHHhcCCCCCEEEEeCCH
Confidence            468999995 6  9999999999999999999  888998888765       1111223432  333   6644  322


Q ss_pred             cCC----hhhhhcCCCCceeecccccCcc
Q 011973          369 DLT----GKEQARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       369 ~i~----~~eq~~a~~G~~f~~~~~v~p~  393 (474)
                      ...    .+-...+++|+++++.+.++|.
T Consensus        92 ~~v~~vl~~l~~~l~~g~iiId~st~~~~  120 (358)
T 4e21_A           92 AVVDSMLQRMTPLLAANDIVIDGGNSHYQ  120 (358)
T ss_dssp             GGHHHHHHHHGGGCCTTCEEEECSSCCHH
T ss_pred             HHHHHHHHHHHhhCCCCCEEEeCCCCChH
Confidence            210    1112346899999999987764

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=91.18  E-value=0.33  Score=48.68  Aligned_cols=81  Identities=14%  Similarity=0.168  Sum_probs=56.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------  366 (474)
                      ..++|.++|--   .||+++|+.|...|.+|+.  |+.++.+.    +..     .....++++  +.++++++      
T Consensus       136 ~gktvGIiGlG---~IG~~vA~~l~~~G~~V~~~dr~~~~~~~----~~~-----~~~~~~l~ell~~aDvV~l~lPlt~  203 (324)
T 3evt_A          136 TGQQLLIYGTG---QIGQSLAAKASALGMHVIGVNTTGHPADH----FHE-----TVAFTATADALATANFIVNALPLTP  203 (324)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHHTTCEEEEEESSCCCCTT----CSE-----EEEGGGCHHHHHHCSEEEECCCCCG
T ss_pred             cCCeEEEECcC---HHHHHHHHHHHhCCCEEEEECCCcchhHh----Hhh-----ccccCCHHHHHhhCCEEEEcCCCch
Confidence            45689999975   9999999999999999998  44332111    111     111224443  66666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc
Q 011973          367 --GDDLTGKEQARAPKGTIFIPYTQ  389 (474)
Q Consensus       367 --g~~i~~~eq~~a~~G~~f~~~~~  389 (474)
                        -..++.+.+..+++|++++.+++
T Consensus       204 ~t~~li~~~~l~~mk~gailIN~aR  228 (324)
T 3evt_A          204 TTHHLFSTELFQQTKQQPMLINIGR  228 (324)
T ss_dssp             GGTTCBSHHHHHTCCSCCEEEECSC
T ss_pred             HHHHhcCHHHHhcCCCCCEEEEcCC
Confidence              34567788889999999999998

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=91.16  E-value=0.12  Score=49.97  Aligned_cols=35  Identities=9%  Similarity=0.159  Sum_probs=30.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      ....|+|+|++|  -||+++|+.|.++|.+|..  |+.+
T Consensus        19 ~~~~vlVTGasG--~iG~~l~~~L~~~g~~V~~~~r~~~   55 (330)
T 2pzm_A           19 SHMRILITGGAG--CLGSNLIEHWLPQGHEILVIDNFAT   55 (330)
T ss_dssp             TCCEEEEETTTS--HHHHHHHHHHGGGTCEEEEEECCSS
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCCc
Confidence            356899999999  9999999999999999988  5443

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=91.15  E-value=0.15  Score=48.47  Aligned_cols=32  Identities=13%  Similarity=0.313  Sum_probs=28.6

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      +|+|+|++|  -||+++++.|.++|.+|..  |+.+
T Consensus         2 ~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~   35 (312)
T 3ko8_A            2 RIVVTGGAG--FIGSHLVDKLVELGYEVVVVDNLSS   35 (312)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred             EEEEECCCC--hHHHHHHHHHHhCCCEEEEEeCCCC
Confidence            699999999  9999999999999999988  5444

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=91.14  E-value=0.16  Score=54.87  Aligned_cols=46  Identities=13%  Similarity=0.133  Sum_probs=36.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c---------chhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I---------CKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~---------~~~~~~~l~~~~~~  344 (474)
                      ..+.|+|+|+++  -||+++|+.|+++|.+|.+  |         +.++.+++.+++..
T Consensus        18 ~gk~~lVTGas~--GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~   74 (613)
T 3oml_A           18 DGRVAVVTGAGA--GLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK   74 (613)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHH
Confidence            457899999997  9999999999999999999  5         66777777777544

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=91.14  E-value=0.13  Score=51.06  Aligned_cols=35  Identities=20%  Similarity=0.222  Sum_probs=30.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      -++|+|+|++|  -||+++++.|.++|.+|..  |+.++
T Consensus        29 ~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~   65 (379)
T 2c5a_A           29 NLKISITGAGG--FIASHIARRLKHEGHYVIASDWKKNE   65 (379)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCCS
T ss_pred             CCeEEEECCcc--HHHHHHHHHHHHCCCeEEEEECCCcc
Confidence            35899999999  9999999999999999988  65543

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=91.10  E-value=0.28  Score=46.18  Aligned_cols=86  Identities=14%  Similarity=0.127  Sum_probs=54.9

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEcCc--CCh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDD--LTG  372 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg~~--i~~  372 (474)
                      .+|.++| +|  .+|+++++.|.+.|.+|.+  |++++.+.++++.+-      ...+++++  ++++++|+--.  ...
T Consensus         4 m~i~iiG-~G--~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~D~Vi~~v~~~~~~   74 (259)
T 2ahr_A            4 MKIGIIG-VG--KMASAIIKGLKQTPHELIISGSSLERSKEIAEQLAL------PYAMSHQDLIDQVDLVILGIKPQLFE   74 (259)
T ss_dssp             CEEEEEC-CS--HHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTC------CBCSSHHHHHHTCSEEEECSCGGGHH
T ss_pred             cEEEEEC-CC--HHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCC------EeeCCHHHHHhcCCEEEEEeCcHhHH
Confidence            4799999 56  9999999999999988888  888888888765321      11223432  56666553211  111


Q ss_pred             hhhhcCCCCceeecccc-cCcc
Q 011973          373 KEQARAPKGTIFIPYTQ-IPPR  393 (474)
Q Consensus       373 ~eq~~a~~G~~f~~~~~-v~p~  393 (474)
                      +-...+.+|.++|+.+- +++.
T Consensus        75 ~v~~~l~~~~~vv~~~~~~~~~   96 (259)
T 2ahr_A           75 TVLKPLHFKQPIISMAAGISLQ   96 (259)
T ss_dssp             HHHTTSCCCSCEEECCTTCCHH
T ss_pred             HHHHHhccCCEEEEeCCCCCHH
Confidence            11223457888887743 5554

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=91.06  E-value=0.29  Score=46.91  Aligned_cols=99  Identities=13%  Similarity=0.191  Sum_probs=63.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE--cCcCCh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDDLTG  372 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv--g~~i~~  372 (474)
                      .+|.++|+ |  .+|+++|+.|.+.|.+|.+  |++++.+.++++   +    +...+++++  ++++++|+  .+.-.-
T Consensus         5 ~~i~iiG~-G--~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~---g----~~~~~~~~~~~~~~D~vi~~vp~~~~~   74 (301)
T 3cky_A            5 IKIGFIGL-G--AMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQ---G----AQACENNQKVAAASDIIFTSLPNAGIV   74 (301)
T ss_dssp             CEEEEECC-C--TTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTT---T----CEECSSHHHHHHHCSEEEECCSSHHHH
T ss_pred             CEEEEECc-c--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC---C----CeecCCHHHHHhCCCEEEEECCCHHHH
Confidence            57999995 6  9999999999999999988  888888888765   1    111224432  56666553  111100


Q ss_pred             h-------hh-hcCCCCceeecccccCcc---C----CC-CCeeeecCCcc
Q 011973          373 K-------EQ-ARAPKGTIFIPYTQIPPR---K----LR-KDCFYHSTPAM  407 (474)
Q Consensus       373 ~-------eq-~~a~~G~~f~~~~~v~p~---~----~R-~dc~y~~~~am  407 (474)
                      +       +. ..+++|+++++.+...|.   +    ++ +.+.|...|.+
T Consensus        75 ~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~~p~~  125 (301)
T 3cky_A           75 ETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVS  125 (301)
T ss_dssp             HHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred             HHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEccCC
Confidence            1       11 246899999999876542   1    12 34566655543

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=90.95  E-value=0.12  Score=50.88  Aligned_cols=32  Identities=16%  Similarity=0.214  Sum_probs=26.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.|+++|+.+.+-||+++|+.|+++|.+|.+
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~   33 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIF   33 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEE
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEE
Confidence            46789999873235999999999999999993

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=90.93  E-value=0.41  Score=47.70  Aligned_cols=64  Identities=19%  Similarity=0.276  Sum_probs=44.8

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccc-----cccceeee-ccccc-CceeEEEE
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  366 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~-t~~~~-~~~~vwiv  366 (474)
                      .+|.++|| |  .+|.++|..|++.|. +|.|  +++++++.....+...     .... +.. +++++ ++++++|.
T Consensus         5 ~kI~VIGa-G--~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~-i~~t~d~~al~~aD~Vi~   78 (322)
T 1t2d_A            5 AKIVLVGS-G--MIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCK-VSGSNTYDDLAGADVVIV   78 (322)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCC-EEEECCGGGGTTCSEEEE
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcE-EEECCCHHHhCCCCEEEE
Confidence            57999999 8  999999999998888 8777  7777777544443221     1122 334 46655 88877663

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=90.89  E-value=0.83  Score=45.12  Aligned_cols=87  Identities=16%  Similarity=0.121  Sum_probs=56.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccccceeeeccc-c-c-CceeEEEEcCcC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY-A-A-HKTKIWLVGDDL  370 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~-~-~-~~~~vwivg~~i  370 (474)
                      ..+|.++| .|  .+|.++|+.|.+.|.  +|..  |++++.+.+++. +...    ...++. + . ++++++|+--..
T Consensus        33 ~~kI~IIG-~G--~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~-G~~~----~~~~~~~~~~~~~aDvVilavp~  104 (314)
T 3ggo_A           33 MQNVLIVG-VG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GIID----EGTTSIAKVEDFSPDFVMLSSPV  104 (314)
T ss_dssp             CSEEEEES-CS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TSCS----EEESCTTGGGGGCCSEEEECSCG
T ss_pred             CCEEEEEe-eC--HHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC-CCcc----hhcCCHHHHhhccCCEEEEeCCH
Confidence            36899999 57  999999999999999  8888  788888877643 1100    011233 3 3 567776631111


Q ss_pred             C--h---hhh-hcCCCCceeecccccCc
Q 011973          371 T--G---KEQ-ARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       371 ~--~---~eq-~~a~~G~~f~~~~~v~p  392 (474)
                      +  .   ++. ..+++|+++++++-+.+
T Consensus       105 ~~~~~vl~~l~~~l~~~~iv~d~~Svk~  132 (314)
T 3ggo_A          105 RTFREIAKKLSYILSEDATVTDQGSVKG  132 (314)
T ss_dssp             GGHHHHHHHHHHHSCTTCEEEECCSCCT
T ss_pred             HHHHHHHHHHhhccCCCcEEEECCCCcH
Confidence            1  1   112 23688999998886654

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=90.83  E-value=0.7  Score=48.17  Aligned_cols=125  Identities=16%  Similarity=0.181  Sum_probs=81.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--cc-----------ccceeeecccc-c-Cce
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--EA-----------QHNLVLSTSYA-A-HKT  361 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~--~~-----------~~~l~~~t~~~-~-~~~  361 (474)
                      .+|.++|+ |  .+|.++|..|++.|.+|++  +++++.+.+++....  +.           ..++...++++ + +++
T Consensus         3 mkI~VIG~-G--~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a   79 (450)
T 3gg2_A            3 LDIAVVGI-G--YVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEA   79 (450)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred             CEEEEECc-C--HHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence            47899997 5  9999999999999999999  899999999875221  00           12222233554 3 667


Q ss_pred             eEEE--EcCcCCh-------------hhh-hcCCCCceeecccccCcc---CC-----------C--CCeeeecCCcccc
Q 011973          362 KIWL--VGDDLTG-------------KEQ-ARAPKGTIFIPYTQIPPR---KL-----------R--KDCFYHSTPAMII  409 (474)
Q Consensus       362 ~vwi--vg~~i~~-------------~eq-~~a~~G~~f~~~~~v~p~---~~-----------R--~dc~y~~~~am~v  409 (474)
                      +++|  |+...++             ++. ..+++|++++.-|-+||.   ++           +  .|+.+..+|..--
T Consensus        80 DvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~a~  159 (450)
T 3gg2_A           80 DIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIASNPEFLK  159 (450)
T ss_dssp             SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCCCC
T ss_pred             CEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeEEechhhhc
Confidence            6655  5554321             111 236899999999988876   11           1  4677777777666


Q ss_pred             CCCCccccccccccCcchhHH
Q 011973          410 PPSLSNMHSCENWLGRRVMSA  430 (474)
Q Consensus       410 P~~~~~~~~~e~~~prr~~~A  430 (474)
                      |+...    -++..|.++|.+
T Consensus       160 eG~~~----~~~~~p~~ivvG  176 (450)
T 3gg2_A          160 EGNAI----DDFMKPDRVVVG  176 (450)
T ss_dssp             TTSHH----HHHHSCSCEEEE
T ss_pred             ccchh----hhccCCCEEEEE
Confidence            66542    234556666644

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=90.80  E-value=0.34  Score=47.71  Aligned_cols=65  Identities=14%  Similarity=0.248  Sum_probs=43.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccc-----cccceeee-ccccc-CceeEEEE
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  366 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~-t~~~~-~~~~vwiv  366 (474)
                      ..+|.++|+ |  .+|+++|..|++.|. +|.+  +++++++.+..++...     .... +.. +++++ ++++++|.
T Consensus         4 ~~kI~VIGa-G--~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~-i~~t~d~~a~~~aDiVi~   78 (317)
T 2ewd_A            4 RRKIAVIGS-G--QIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSK-VIGTDDYADISGSDVVII   78 (317)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCC-EEEESCGGGGTTCSEEEE
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcE-EEECCCHHHhCCCCEEEE
Confidence            357999999 7  999999999999998 8888  7777777643222111     1112 333 35555 78877663

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=90.77  E-value=0.16  Score=49.18  Aligned_cols=35  Identities=17%  Similarity=0.230  Sum_probs=30.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      +-+.++|+|+++  -||+|+|+.|+++|.+|.+  |+++
T Consensus        10 ~GK~alVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~   46 (261)
T 4h15_A           10 RGKRALITAGTK--GAGAATVSLFLELGAQVLTTARARP   46 (261)
T ss_dssp             TTCEEEESCCSS--HHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             CCCEEEEeccCc--HHHHHHHHHHHHcCCEEEEEECCch
Confidence            457889999997  9999999999999999999  5543

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=90.72  E-value=0.18  Score=50.19  Aligned_cols=36  Identities=8%  Similarity=0.141  Sum_probs=31.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  335 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~  335 (474)
                      .++|+|+||||  -||+++++.|.++|.+|..  |+.++.
T Consensus         5 ~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~   42 (352)
T 1xgk_A            5 KKTIAVVGATG--RQGASLIRVAAAVGHHVRAQVHSLKGL   42 (352)
T ss_dssp             CCCEEEESTTS--HHHHHHHHHHHHTTCCEEEEESCSCSH
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHhCCCEEEEEECCCChh
Confidence            35799999999  9999999999999998887  766654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=90.71  E-value=0.22  Score=44.45  Aligned_cols=30  Identities=27%  Similarity=0.263  Sum_probs=27.3

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cch
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  332 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~  332 (474)
                      +|+|+|++|  -||+++|+.|. +|.+|.+  |+.
T Consensus         5 ~vlVtGasg--~iG~~~~~~l~-~g~~V~~~~r~~   36 (202)
T 3d7l_A            5 KILLIGASG--TLGSAVKERLE-KKAEVITAGRHS   36 (202)
T ss_dssp             EEEEETTTS--HHHHHHHHHHT-TTSEEEEEESSS
T ss_pred             EEEEEcCCc--HHHHHHHHHHH-CCCeEEEEecCc
Confidence            699999998  99999999999 9999998  554

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=90.70  E-value=0.24  Score=51.66  Aligned_cols=111  Identities=17%  Similarity=0.271  Sum_probs=70.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhcc--CcEEEe--cchhhHHHHHhh-Ccc-c----------cccceeeecccc-c-Cc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKLR-IPV-E----------AQHNLVLSTSYA-A-HK  360 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~--~v~v~l--~~~~~~~~l~~~-~~~-~----------~~~~l~~~t~~~-~-~~  360 (474)
                      .+|.++|. |  .+|.++|..|++.  |.+|++  +++++.+.+++. ++- +          ....+...++.+ + ++
T Consensus         6 mkI~VIG~-G--~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~   82 (467)
T 2q3e_A            6 KKICCIGA-G--YVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKE   82 (467)
T ss_dssp             CEEEEECC-S--TTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH
T ss_pred             cEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhc
Confidence            47999996 5  9999999999998  899988  889999988764 111 0          001222233443 3 66


Q ss_pred             eeEEE--EcCcCCh------------------hhhh-cCCCCceeecccccCccC---C--------C--CCeeeecCCc
Q 011973          361 TKIWL--VGDDLTG------------------KEQA-RAPKGTIFIPYTQIPPRK---L--------R--KDCFYHSTPA  406 (474)
Q Consensus       361 ~~vwi--vg~~i~~------------------~eq~-~a~~G~~f~~~~~v~p~~---~--------R--~dc~y~~~~a  406 (474)
                      ++++|  |++..+.                  ++.. .+++|+++++.|.++|..   +        +  .|+.+..+|.
T Consensus        83 aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~Pe  162 (467)
T 2q3e_A           83 ADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPE  162 (467)
T ss_dssp             CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECCC
T ss_pred             CCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCHH
Confidence            66654  5444432                  1222 368999999998888751   1        1  3555566666


Q ss_pred             cccCCC
Q 011973          407 MIIPPS  412 (474)
Q Consensus       407 m~vP~~  412 (474)
                      ..-|+.
T Consensus       163 ~~~~G~  168 (467)
T 2q3e_A          163 FLAEGT  168 (467)
T ss_dssp             CCCTTS
T ss_pred             Hhhccc
Confidence            555554

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=90.61  E-value=0.19  Score=46.17  Aligned_cols=40  Identities=18%  Similarity=0.193  Sum_probs=35.3

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      +|+++|+ |  .+|+.+|+.|.++|.+|++  +++++.+.++++.
T Consensus         2 ~iiIiG~-G--~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~   43 (218)
T 3l4b_C            2 KVIIIGG-E--TTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL   43 (218)
T ss_dssp             CEEEECC-H--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc
Confidence            5899997 6  9999999999999999999  8899998887653

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=90.61  E-value=0.48  Score=46.69  Aligned_cols=54  Identities=13%  Similarity=0.100  Sum_probs=41.6

Q ss_pred             hHHHHHHhcCc-CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          285 LAAAVVVNSLP-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       285 ltaAvvl~~ip-~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      .||+-.++... +..+.|+++|++|  -||+++++.+...|.+|..  +++++++.+++
T Consensus       156 ~ta~~~l~~~~~~~g~~vlV~Ga~g--giG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~  212 (347)
T 2hcy_A          156 ITVYKALKSANLMAGHWVAISGAAG--GLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS  212 (347)
T ss_dssp             HHHHHHHHTTTCCTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH
Confidence            44555555442 3456899999998  9999999999999999887  78888876654

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=90.58  E-value=0.7  Score=48.35  Aligned_cols=128  Identities=16%  Similarity=0.148  Sum_probs=86.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--cc-----------ccceeeecccc-c-C
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--EA-----------QHNLVLSTSYA-A-H  359 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~--~~-----------~~~l~~~t~~~-~-~  359 (474)
                      +.-++.++|.-   .+|.++|..|++.|.+|++  +++++.+.|++....  +.           ..++...++.+ + +
T Consensus         7 ~~~~~~vIGlG---~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~   83 (446)
T 4a7p_A            7 GSVRIAMIGTG---YVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVK   83 (446)
T ss_dssp             CCCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHT
T ss_pred             CceEEEEEcCC---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHh
Confidence            45678999976   9999999999999999999  999999999875211  11           12333334554 4 7


Q ss_pred             ceeEEE--EcCcCCh--------------hhh-hcCCCCceeecccccCccCC------------CCCeeeecCCccccC
Q 011973          360 KTKIWL--VGDDLTG--------------KEQ-ARAPKGTIFIPYTQIPPRKL------------RKDCFYHSTPAMIIP  410 (474)
Q Consensus       360 ~~~vwi--vg~~i~~--------------~eq-~~a~~G~~f~~~~~v~p~~~------------R~dc~y~~~~am~vP  410 (474)
                      +++++|  |+...++              ++. ..+++|++++.-|-+||...            +.|+.+..+|..--|
T Consensus        84 ~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~~d~~v~~~Pe~a~e  163 (446)
T 4a7p_A           84 DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPNSGAKVVSNPEFLRE  163 (446)
T ss_dssp             TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTTSCCEEEECCCCCCT
T ss_pred             cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCCCCceEEeCcccccc
Confidence            776654  5555432              111 24789999999998888611            147778888876666


Q ss_pred             CCCccccccccccCcchhHHH
Q 011973          411 PSLSNMHSCENWLGRRVMSAW  431 (474)
Q Consensus       411 ~~~~~~~~~e~~~prr~~~Ac  431 (474)
                      +...    -++..|.++|.+|
T Consensus       164 G~a~----~d~~~p~~ivvG~  180 (446)
T 4a7p_A          164 GAAI----EDFKRPDRVVVGT  180 (446)
T ss_dssp             TSHH----HHHHSCSCEEEEC
T ss_pred             cchh----hhccCCCEEEEeC
Confidence            6531    1245676776665

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=90.50  E-value=0.29  Score=47.77  Aligned_cols=54  Identities=26%  Similarity=0.313  Sum_probs=41.0

Q ss_pred             hHHHHHHhc-----CcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          285 LAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       285 ltaAvvl~~-----ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      +||+..++.     +..+..+|++.|++|  -||.++++.+...|.+|+.  +++++++.+++
T Consensus       133 ~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G--~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~  193 (330)
T 1tt7_A          133 FTAALSVHRLEQNGLSPEKGSVLVTGATG--GVGGIAVSMLNKRGYDVVASTGNREAADYLKQ  193 (330)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEEESTTS--HHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred             HHHHHHHHHHHhcCcCCCCceEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            456655543     333433699999998  9999999988889998877  77888887764

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=90.46  E-value=0.42  Score=46.73  Aligned_cols=97  Identities=11%  Similarity=0.158  Sum_probs=59.5

Q ss_pred             HHHHHHhcC--cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecc--c-cc
Q 011973          286 AAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS--Y-AA  358 (474)
Q Consensus       286 taAvvl~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~--~-~~  358 (474)
                      ||+-.+...  .+..+.|+++|++|  -||.++++.+...|.+|..  +++++++.+++ ++.+.   .+..++  . ++
T Consensus       132 ta~~~l~~~~~~~~g~~vlV~Ga~g--giG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g~~~---~~d~~~~~~~~~  205 (333)
T 1wly_A          132 TAQYLLHQTHKVKPGDYVLIHAAAG--GMGHIMVPWARHLGATVIGTVSTEEKAETARK-LGCHH---TINYSTQDFAEV  205 (333)
T ss_dssp             HHHHHHHTTSCCCTTCEEEETTTTS--TTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCSE---EEETTTSCHHHH
T ss_pred             HHHHHHHHhhCCCCCCEEEEECCcc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCCE---EEECCCHHHHHH
Confidence            444444322  23456899999998  9999999999999999888  88888888765 33221   222221  1 11


Q ss_pred             -------CceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 011973          359 -------HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       359 -------~~~~vwi--vg~~i~~~eq~~a~~G~~f~~~~  388 (474)
                             ..++++|  +|...-..-...+.+|-.++.+.
T Consensus       206 i~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~g  244 (333)
T 1wly_A          206 VREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYG  244 (333)
T ss_dssp             HHHHHTTCCEEEEEECSCTTTHHHHHHTEEEEEEEEECC
T ss_pred             HHHHhCCCCCeEEEECCcHHHHHHHHHhhccCCEEEEEe
Confidence                   2357766  55422223333455666677665

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=90.39  E-value=0.46  Score=46.74  Aligned_cols=98  Identities=15%  Similarity=0.078  Sum_probs=60.2

Q ss_pred             hHHHHHHhcC--cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecc--c-c
Q 011973          285 LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS--Y-A  357 (474)
Q Consensus       285 ltaAvvl~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~--~-~  357 (474)
                      .||+-.++..  .+..+.|+++|++|  -||.++++.+...|.+|..  +++++++.+++ ++...   .+..++  . +
T Consensus       152 ~ta~~al~~~~~~~~g~~vlV~Gasg--~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~ga~~---~~d~~~~~~~~  225 (343)
T 2eih_A          152 LTAWQMVVDKLGVRPGDDVLVMAAGS--GVSVAAIQIAKLFGARVIATAGSEDKLRRAKA-LGADE---TVNYTHPDWPK  225 (343)
T ss_dssp             HHHHHHHTTTSCCCTTCEEEECSTTS--TTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCSE---EEETTSTTHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cCCCE---EEcCCcccHHH
Confidence            3444455443  23456899999998  9999999999999999887  88888888864 33221   232221  1 1


Q ss_pred             c-------CceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 011973          358 A-------HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       358 ~-------~~~~vwi--vg~~i~~~eq~~a~~G~~f~~~~  388 (474)
                      +       ...+++|  +|...-.+-...+.+|-.++.+.
T Consensus       226 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g  265 (343)
T 2eih_A          226 EVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAG  265 (343)
T ss_dssp             HHHHHTTTTCEEEEEESSCSSSHHHHHHHEEEEEEEEESS
T ss_pred             HHHHHhCCCCceEEEECCCHHHHHHHHHhhccCCEEEEEe
Confidence            1       2457777  55222223333445555666665

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=90.36  E-value=0.32  Score=47.14  Aligned_cols=28  Identities=18%  Similarity=0.261  Sum_probs=25.9

Q ss_pred             EEEEeccCCCchhHHHHHHHHhcc-CcEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQM-GIKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~-~v~v~l  329 (474)
                      +|+|+|++|  -||+++|+.|.++ |.+|..
T Consensus         2 kvlVTGasG--~iG~~l~~~L~~~~g~~V~~   30 (361)
T 1kew_A            2 KILITGGAG--FIGSAVVRHIIKNTQDTVVN   30 (361)
T ss_dssp             EEEEESTTS--HHHHHHHHHHHHHCSCEEEE
T ss_pred             EEEEECCCc--hHhHHHHHHHHhcCCCeEEE
Confidence            589999999  9999999999987 788887

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=90.34  E-value=0.49  Score=45.95  Aligned_cols=37  Identities=24%  Similarity=0.376  Sum_probs=31.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHH
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYE  336 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~  336 (474)
                      ...+|.++|+ |  .+|.++|..|++.|.  +|++  +++++.+
T Consensus         6 ~~mkI~IiGa-G--~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~   46 (319)
T 1lld_A            6 KPTKLAVIGA-G--AVGSTLAFAAAQRGIAREIVLEDIAKERVE   46 (319)
T ss_dssp             -CCEEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCChhHHH
Confidence            3458999999 7  999999999999998  8888  7776766

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=90.33  E-value=0.19  Score=49.48  Aligned_cols=33  Identities=15%  Similarity=0.116  Sum_probs=29.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      +.|+|+|++|  -||+++|+.|.++|.+|..  |+.+
T Consensus        29 k~vlVtGatG--~IG~~l~~~L~~~g~~V~~~~r~~~   63 (381)
T 1n7h_A           29 KIALITGITG--QDGSYLTEFLLGKGYEVHGLIRRSS   63 (381)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             CeEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecCCc
Confidence            6899999999  9999999999999999988  6544

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=90.25  E-value=0.11  Score=51.35  Aligned_cols=36  Identities=17%  Similarity=0.147  Sum_probs=29.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHH
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  336 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~  336 (474)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+
T Consensus         3 k~vlVTGas~--GIG~ala~~L~~~G~~v~~v~r~~~~~~   40 (327)
T 1jtv_A            3 TVVLITGCSS--GIGLHLAVRLASDPSQSFKVYATLRDLK   40 (327)
T ss_dssp             EEEEESCCSS--HHHHHHHHHHHTCTTCCEEEEEEESCGG
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHCCCceEEEEeecCcHH
Confidence            5789999998  9999999999999988765  5544443

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=90.25  E-value=0.11  Score=48.80  Aligned_cols=33  Identities=21%  Similarity=0.295  Sum_probs=29.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      ++|+|+|++|  -||+++++.|.++|.+|.+  |+.+
T Consensus         3 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~   37 (267)
T 3ay3_A            3 NRLLVTGAAG--GVGSAIRPHLGTLAHEVRLSDIVDL   37 (267)
T ss_dssp             EEEEEESTTS--HHHHHHGGGGGGTEEEEEECCSSCC
T ss_pred             ceEEEECCCC--HHHHHHHHHHHhCCCEEEEEeCCCc
Confidence            4799999999  9999999999999999988  5544

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=90.22  E-value=0.3  Score=47.61  Aligned_cols=57  Identities=21%  Similarity=0.298  Sum_probs=42.5

Q ss_pred             hHHHHHHhc-----CcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          285 LAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       285 ltaAvvl~~-----ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +||+..++.     +..+..+|++.|++|  -||.++++.+...|.+|..  +++++++.+++ ++.
T Consensus       132 ~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G--~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-lGa  195 (328)
T 1xa0_A          132 FTAALSIHRLEEHGLTPERGPVLVTGATG--GVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LGA  195 (328)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEESSTTS--HHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TTC
T ss_pred             HHHHHHHHHHhhcCCCCCCceEEEecCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCC
Confidence            356655543     333433699999998  9999999988889998877  77888888764 444

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=90.20  E-value=0.29  Score=47.25  Aligned_cols=29  Identities=17%  Similarity=0.226  Sum_probs=27.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +.|+|+|++|  -||+++|+.|.++|.+|..
T Consensus         3 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~   31 (348)
T 1ek6_A            3 EKVLVTGGAG--YIGSHTVLELLEAGYLPVV   31 (348)
T ss_dssp             SEEEEETTTS--HHHHHHHHHHHHTTCCEEE
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHCCCEEEE
Confidence            5799999999  9999999999999999887

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=90.17  E-value=0.39  Score=48.30  Aligned_cols=81  Identities=12%  Similarity=0.175  Sum_probs=55.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------  366 (474)
                      ..++|.++|--   .||+++|+.|...|.+|+.  |+.++.+    .+  .   ......++++  +.++++++      
T Consensus       139 ~g~tvGIIGlG---~IG~~vA~~l~~~G~~V~~~dr~~~~~~----~~--~---~~~~~~~l~ell~~aDvV~l~lPlt~  206 (324)
T 3hg7_A          139 KGRTLLILGTG---SIGQHIAHTGKHFGMKVLGVSRSGRERA----GF--D---QVYQLPALNKMLAQADVIVSVLPATR  206 (324)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSCCCCT----TC--S---EEECGGGHHHHHHTCSEEEECCCCCS
T ss_pred             ccceEEEEEEC---HHHHHHHHHHHhCCCEEEEEcCChHHhh----hh--h---cccccCCHHHHHhhCCEEEEeCCCCH
Confidence            35689999976   9999999999999999998  3332110    00  0   1111224443  66767552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc
Q 011973          367 --GDDLTGKEQARAPKGTIFIPYTQ  389 (474)
Q Consensus       367 --g~~i~~~eq~~a~~G~~f~~~~~  389 (474)
                        -..++.+....+++|+++|.++|
T Consensus       207 ~T~~li~~~~l~~mk~gailIN~aR  231 (324)
T 3hg7_A          207 ETHHLFTASRFEHCKPGAILFNVGR  231 (324)
T ss_dssp             SSTTSBCTTTTTCSCTTCEEEECSC
T ss_pred             HHHHHhHHHHHhcCCCCcEEEECCC
Confidence              23467788888999999999999

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=90.16  E-value=0.35  Score=50.76  Aligned_cols=44  Identities=20%  Similarity=0.218  Sum_probs=34.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcE-EEe--cchh---hHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKD---DYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~-v~l--~~~~---~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|++|.++|.+ |.+  |+.+   +.+++.+++
T Consensus       225 ~~~~vLITGgtG--gIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l  274 (486)
T 2fr1_A          225 PTGTVLVTGGTG--GVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAEL  274 (486)
T ss_dssp             CCSEEEEETTTS--HHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHH
Confidence            457899999999  9999999999999985 666  6654   455555543

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=90.14  E-value=0.29  Score=47.42  Aligned_cols=31  Identities=26%  Similarity=0.376  Sum_probs=28.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +-+.++|+|+++  -||+|+|+.|+++|-+|.+
T Consensus         8 ~GKvalVTGas~--GIG~aiA~~la~~Ga~Vvi   38 (247)
T 4hp8_A            8 EGRKALVTGANT--GLGQAIAVGLAAAGAEVVC   38 (247)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEeCcCC--HHHHHHHHHHHHcCCEEEE
Confidence            356789999997  9999999999999999999

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=90.12  E-value=0.44  Score=47.97  Aligned_cols=86  Identities=14%  Similarity=0.077  Sum_probs=58.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHh-ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE-----
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-----  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~-~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv-----  366 (474)
                      ..++|.++|. |  .||+++|+.|. ..|.+|+.  ++.++.+..++. +      ...++++++  +.++++++     
T Consensus       162 ~g~~vgIIG~-G--~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~-g------~~~~~~l~ell~~aDvVil~vp~~  231 (348)
T 2w2k_A          162 RGHVLGAVGL-G--AIQKEIARKAVHGLGMKLVYYDVAPADAETEKAL-G------AERVDSLEELARRSDCVSVSVPYM  231 (348)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHH-T------CEECSSHHHHHHHCSEEEECCCCS
T ss_pred             CCCEEEEEEE-C--HHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhc-C------cEEeCCHHHHhccCCEEEEeCCCC
Confidence            4568999996 5  99999999999 99999988  555444433221 1      111223432  56666552     


Q ss_pred             ---cCcCChhhhhcCCCCceeecccccCc
Q 011973          367 ---GDDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       367 ---g~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                         ...++.+....+++|++++..++.++
T Consensus       232 ~~t~~li~~~~l~~mk~gailin~srg~~  260 (348)
T 2w2k_A          232 KLTHHLIDEAFFAAMKPGSRIVNTARGPV  260 (348)
T ss_dssp             GGGTTCBCHHHHHHSCTTEEEEECSCGGG
T ss_pred             hHHHHHhhHHHHhcCCCCCEEEECCCCch
Confidence               24455667778999999999998544

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=90.09  E-value=0.48  Score=46.25  Aligned_cols=98  Identities=11%  Similarity=0.106  Sum_probs=61.5

Q ss_pred             hHHHHHHhcC--cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--cc-c
Q 011973          285 LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SY-A  357 (474)
Q Consensus       285 ltaAvvl~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~-~  357 (474)
                      +||+..+...  .+..+.|++.|++|  -||.++++.+...|.+|..  +++++++.+++ ++...   .+..+  +. +
T Consensus       126 ~ta~~~l~~~~~~~~g~~VlV~Ga~g--~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~Ga~~---~~~~~~~~~~~  199 (325)
T 3jyn_A          126 LTVQYLLRQTYQVKPGEIILFHAAAG--GVGSLACQWAKALGAKLIGTVSSPEKAAHAKA-LGAWE---TIDYSHEDVAK  199 (325)
T ss_dssp             HHHHHHHHTTSCCCTTCEEEESSTTS--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCSE---EEETTTSCHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCCE---EEeCCCccHHH
Confidence            4555555443  23467899999998  9999999999999999987  78888887764 33322   23222  11 1


Q ss_pred             c-------CceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 011973          358 A-------HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       358 ~-------~~~~vwi--vg~~i~~~eq~~a~~G~~f~~~~  388 (474)
                      +       ...++++  +|...-..-...+.+|-.++.+.
T Consensus       200 ~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g  239 (325)
T 3jyn_A          200 RVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFG  239 (325)
T ss_dssp             HHHHHTTTCCEEEEEESSCGGGHHHHHTTEEEEEEEEECC
T ss_pred             HHHHHhCCCCceEEEECCChHHHHHHHHHhcCCCEEEEEe
Confidence            1       2457766  55433333344555666666665

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=90.05  E-value=0.31  Score=43.35  Aligned_cols=41  Identities=17%  Similarity=0.218  Sum_probs=35.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhcc-CcEEEe--cchhhHHHHHhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l--~~~~~~~~l~~~  341 (474)
                      ..+|+++|. |  .+|+.+|+.|.+. |.+|++  +++++.+.+++.
T Consensus        39 ~~~v~IiG~-G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~   82 (183)
T 3c85_A           39 HAQVLILGM-G--RIGTGAYDELRARYGKISLGIEIREEAAQQHRSE   82 (183)
T ss_dssp             TCSEEEECC-S--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT
T ss_pred             CCcEEEECC-C--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC
Confidence            457999995 6  9999999999998 999988  888888887654

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=90.03  E-value=0.31  Score=47.59  Aligned_cols=60  Identities=18%  Similarity=0.165  Sum_probs=46.5

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCc
Q 011973          280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~  343 (474)
                      |||-....+..-..+. ..++|+|.|+-|   .|++++.+|.+.|+ +|++  |+.++.++|.++++
T Consensus       102 TD~~G~~~~l~~~~~~-~~~~vlvlGaGg---aarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~  164 (271)
T 1npy_A          102 TDYIAIVKLIEKYHLN-KNAKVIVHGSGG---MAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG  164 (271)
T ss_dssp             HHHHHHHHHHHHTTCC-TTSCEEEECSST---THHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHhCCC-CCCEEEEECCcH---HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC
Confidence            6676666665444444 346899999874   89999999999997 6877  88899999987754

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=89.96  E-value=0.34  Score=48.41  Aligned_cols=64  Identities=14%  Similarity=0.230  Sum_probs=42.1

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcc-----ccccceeeeccccc-CceeEEEE
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPV-----EAQHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~-----~~~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      +|.++|+ |  .||+++|..|++.+.  .+.+  +++++.+-...++..     ....++...+.+++ ++++++|+
T Consensus         2 kv~ViGa-G--~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii   75 (314)
T 3nep_X            2 KVTVIGA-G--NVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCII   75 (314)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEE
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEE
Confidence            6899997 8  999999999998887  7777  677776643333222     11122221224556 88888765

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=89.95  E-value=0.59  Score=46.08  Aligned_cols=42  Identities=17%  Similarity=0.130  Sum_probs=36.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      ..+.|++.|++|  -||.++++.+...|.+|+.  +++++++.+++
T Consensus       150 ~g~~VlV~gg~G--~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~  193 (346)
T 3fbg_A          150 EGKTLLIINGAG--GVGSIATQIAKAYGLRVITTASRNETIEWTKK  193 (346)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH
T ss_pred             CCCEEEEEcCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence            456899999998  9999999999899999888  77888888776

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=89.92  E-value=0.24  Score=48.34  Aligned_cols=33  Identities=18%  Similarity=0.165  Sum_probs=27.8

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      +.|+|+|++|  -||+++|+.|.++|.+|.+  |+.+
T Consensus         2 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~   36 (372)
T 1db3_A            2 KVALITGVTG--QDGSYLAEFLLEKGYEVHGIKRRAS   36 (372)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEECC---
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEECCCc
Confidence            4799999999  9999999999999999988  5543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=89.77  E-value=0.36  Score=46.30  Aligned_cols=79  Identities=14%  Similarity=0.179  Sum_probs=55.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEc-------
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVG-------  367 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg-------  367 (474)
                      .+|.++|+||  .+|+++|+.|.+.|.+|.+  |++++.+.+++. +       +..++.. . ++++++|+-       
T Consensus        12 m~I~iIG~tG--~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-g-------~~~~~~~~~~~~aDvVi~av~~~~~~   81 (286)
T 3c24_A           12 KTVAILGAGG--KMGARITRKIHDSAHHLAAIEIAPEGRDRLQGM-G-------IPLTDGDGWIDEADVVVLALPDNIIE   81 (286)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHT-T-------CCCCCSSGGGGTCSEEEECSCHHHHH
T ss_pred             CEEEEECCCC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhc-C-------CCcCCHHHHhcCCCEEEEcCCchHHH
Confidence            4799999999  9999999999999999988  888888888762 1       1122332 3 667776621       


Q ss_pred             CcCChhhh-hcCCCCceeecccc
Q 011973          368 DDLTGKEQ-ARAPKGTIFIPYTQ  389 (474)
Q Consensus       368 ~~i~~~eq-~~a~~G~~f~~~~~  389 (474)
                      +.+  ++. ..+++|+++++.+-
T Consensus        82 ~v~--~~l~~~l~~~~ivv~~s~  102 (286)
T 3c24_A           82 KVA--EDIVPRVRPGTIVLILDA  102 (286)
T ss_dssp             HHH--HHHGGGSCTTCEEEESCS
T ss_pred             HHH--HHHHHhCCCCCEEEECCC
Confidence            111  122 23578999998776

>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}

Probab=89.73  E-value=1.8  Score=44.00  Aligned_cols=161  Identities=16%  Similarity=0.188  Sum_probs=92.0

Q ss_pred             HHHcCCcEEEecc----ccccccccc-------cCceeeecCCC---------CcceeeecCCh---h------HHHHHH
Q 011973          241 ADAKGVKVISLGL----LNQGEELNR-------NGEIYLERQPN---------KLKIKVVDGSS---L------AAAVVV  291 (474)
Q Consensus       241 A~k~G~kV~~LG~----ln~~e~ln~-------~g~l~v~k~p~---------~L~irvv~Gns---l------taAvvl  291 (474)
                      +.++|.+++.|+.    +.++|.+-.       ..-+.+.|+|.         ..+|+|+.|-+   |      =..++.
T Consensus        92 ~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~y~D~IviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~TI~  171 (340)
T 4ep1_A           92 MVQLGGHGMFLNGKEMQMGRGETVSDTAKVLSHYIDGIMIRTFSHADVEELAKESSIPVINGLTDDHHPCQALADLMTIY  171 (340)
T ss_dssp             HHHTTCEEEEEESCC------CCTTHHHHHHHHHCSEEEEECSCHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEcCcccccCCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHH
Confidence            4579999999975    444666543       44556778875         34577876543   1      144555


Q ss_pred             hcCc-CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhH-------HHHHhhCccccccceeeec-ccc-c-Cc
Q 011973          292 NSLP-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-------EKLKLRIPVEAQHNLVLST-SYA-A-HK  360 (474)
Q Consensus       292 ~~ip-~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~-------~~l~~~~~~~~~~~l~~~t-~~~-~-~~  360 (474)
                      +... -+..+|+++|..+  -+++..+.+|++-|.++.+-.++.|       +.+++ ..++.+.. +..+ +.+ + ++
T Consensus       172 E~~G~l~glkva~vGD~~--nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~-~a~~~G~~-v~~~~d~~eav~~  247 (340)
T 4ep1_A          172 EETNTFKGIKLAYVGDGN--NVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALA-IAKETGAE-IEILHNPELAVNE  247 (340)
T ss_dssp             HHHSCCTTCEEEEESCCC--HHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHH-HHHHHCCC-EEEESCHHHHHTT
T ss_pred             HHhCCCCCCEEEEECCCc--hhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHH-HHHHcCCe-EEEECCHHHHhCC
Confidence            5543 2567999999975  7999999999999999998222222       22221 11223333 3344 444 4 88


Q ss_pred             eeEEEEcCcCChhhhhcCCCCceeecccccCcc---CCCCCee-eecCCc
Q 011973          361 TKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPA  406 (474)
Q Consensus       361 ~~vwivg~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~-y~~~~a  406 (474)
                      ++|+..+-|.+..+......=..|-+| |++++   ..++|+. .|.+|+
T Consensus       248 aDVvyt~~w~smg~e~~~~~~~~~~~y-~vt~ell~~ak~dai~MHcLPa  296 (340)
T 4ep1_A          248 ADFIYTDVWMSMGQEGEEEKYTLFQPY-QINKELVKHAKQTYHFLHCLPA  296 (340)
T ss_dssp             CSEEEECCC------CHHHHHHHHGGG-CBCHHHHTTSCTTCEEEECSCC
T ss_pred             CCEEEecCccCCCCCchHHHHHHhccc-cCCHHHHHhcCCCcEEECCCCC
Confidence            888887666653211000000123344 48877   4557876 677875

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=89.70  E-value=0.47  Score=48.02  Aligned_cols=78  Identities=12%  Similarity=0.091  Sum_probs=53.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------  366 (474)
                      ..++|.++|.-   .||+++|+.|...|.+|+.  |++++      ...      .....+.++  +.++++++      
T Consensus       170 ~gktiGIIGlG---~IG~~vA~~l~~~G~~V~~~dr~~~~------~~~------~~~~~sl~ell~~aDvVil~vP~t~  234 (340)
T 4dgs_A          170 KGKRIGVLGLG---QIGRALASRAEAFGMSVRYWNRSTLS------GVD------WIAHQSPVDLARDSDVLAVCVAASA  234 (340)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHTTTCEEEEECSSCCT------TSC------CEECSSHHHHHHTCSEEEECC----
T ss_pred             cCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcCCccc------ccC------ceecCCHHHHHhcCCEEEEeCCCCH
Confidence            35789999984   9999999999999999988  44332      100      111224433  56666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc
Q 011973          367 --GDDLTGKEQARAPKGTIFIPYTQ  389 (474)
Q Consensus       367 --g~~i~~~eq~~a~~G~~f~~~~~  389 (474)
                        -..++.+.+..+++|++++.+++
T Consensus       235 ~t~~li~~~~l~~mk~gailIN~aR  259 (340)
T 4dgs_A          235 ATQNIVDASLLQALGPEGIVVNVAR  259 (340)
T ss_dssp             ------CHHHHHHTTTTCEEEECSC
T ss_pred             HHHHHhhHHHHhcCCCCCEEEECCC
Confidence              24467788888999999999998

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=89.67  E-value=0.58  Score=46.17  Aligned_cols=44  Identities=9%  Similarity=0.100  Sum_probs=38.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCcc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +.|+++|++|  -||.++++.+...|. +|..  +++++++.++++++.
T Consensus       162 ~~vlI~Gasg--giG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~  208 (357)
T 2zb4_A          162 KTMVVSGAAG--ACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF  208 (357)
T ss_dssp             CEEEESSTTB--HHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC
T ss_pred             cEEEEECCCc--HHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC
Confidence            7899999998  999999999999999 8887  788899988876654

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=89.66  E-value=0.27  Score=47.72  Aligned_cols=98  Identities=18%  Similarity=0.207  Sum_probs=59.0

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccc-
Q 011973          285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY-  356 (474)
Q Consensus       285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~-  356 (474)
                      +||+..++.+     ..+..+|++.|++|  -||.+.++.+...|.+|..  +++++++.+++ ++.+.   ++..++. 
T Consensus       129 ~ta~~al~~~~~~~~~~~~g~VlV~Ga~G--~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~---vi~~~~~~  202 (324)
T 3nx4_A          129 FTAMLCVMALEDAGIRPQDGEVVVTGASG--GVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-LGANR---ILSRDEFA  202 (324)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEESSTTS--HHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-HTCSE---EEEGGGSS
T ss_pred             HHHHHHHHHhhhcccCCCCCeEEEECCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCCE---EEecCCHH
Confidence            4556555543     22332499999998  9999999998899999888  78888888865 34332   2322221 


Q ss_pred             --cc---CceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 011973          357 --AA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       357 --~~---~~~~vwi--vg~~i~~~eq~~a~~G~~f~~~~  388 (474)
                        ++   ...++++  +|...-.+-...+.+|-.++.+.
T Consensus       203 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G  241 (324)
T 3nx4_A          203 ESRPLEKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAACG  241 (324)
T ss_dssp             CCCSSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECC
T ss_pred             HHHhhcCCCccEEEECCCcHHHHHHHHHHhcCCEEEEEe
Confidence              11   2345555  33322233333445555566655

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=89.66  E-value=0.57  Score=47.53  Aligned_cols=83  Identities=16%  Similarity=0.172  Sum_probs=55.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhh-HHHHHhhCccccccceeeeccccc--CceeEEEE-------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD-YEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~-~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv-------  366 (474)
                      ..++|.++|- |  .||+++|+.|...|.+|+..+... -+.. .+.+.      -.+.++++  +.++++++       
T Consensus       159 ~g~tvGIIGl-G--~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-~~~g~------~~~~~l~ell~~aDiV~l~~Plt~~  228 (352)
T 3gg9_A          159 KGQTLGIFGY-G--KIGQLVAGYGRAFGMNVLVWGRENSKERA-RADGF------AVAESKDALFEQSDVLSVHLRLNDE  228 (352)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSHHHHHHH-HHTTC------EECSSHHHHHHHCSEEEECCCCSTT
T ss_pred             CCCEEEEEeE-C--HHHHHHHHHHHhCCCEEEEECCCCCHHHH-HhcCc------eEeCCHHHHHhhCCEEEEeccCcHH
Confidence            3568999996 5  999999999999999999832221 1111 11111      11224433  56666552       


Q ss_pred             -cCcCChhhhhcCCCCceeecccc
Q 011973          367 -GDDLTGKEQARAPKGTIFIPYTQ  389 (474)
Q Consensus       367 -g~~i~~~eq~~a~~G~~f~~~~~  389 (474)
                       -..++.+....+++|+++|.+++
T Consensus       229 t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          229 TRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             TTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             HHHhhCHHHHhhCCCCcEEEECCC
Confidence             23466788889999999999998

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=89.63  E-value=0.27  Score=48.69  Aligned_cols=79  Identities=18%  Similarity=0.142  Sum_probs=55.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE-------
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  366 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv-------  366 (474)
                      .++|.++|--   .||+++|+.|...|.+|+.  |+.++.+.            ....+++++  ++++++++       
T Consensus       122 g~tvGIIGlG---~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------------~~~~~~l~ell~~aDiV~l~~P~t~~  186 (290)
T 3gvx_A          122 GKALGILGYG---GIGRRVAHLAKAFGMRVIAYTRSSVDQNV------------DVISESPADLFRQSDFVLIAIPLTDK  186 (290)
T ss_dssp             TCEEEEECCS---HHHHHHHHHHHHHTCEEEEECSSCCCTTC------------SEECSSHHHHHHHCSEEEECCCCCTT
T ss_pred             cchheeeccC---chhHHHHHHHHhhCcEEEEEecccccccc------------ccccCChHHHhhccCeEEEEeecccc
Confidence            4689999975   9999999999999999998  44332110            011224433  56666552       


Q ss_pred             -cCcCChhhhhcCCCCceeecccccC
Q 011973          367 -GDDLTGKEQARAPKGTIFIPYTQIP  391 (474)
Q Consensus       367 -g~~i~~~eq~~a~~G~~f~~~~~v~  391 (474)
                       -..++.+....+++|++++++++-+
T Consensus       187 t~~li~~~~l~~mk~gailIN~aRG~  212 (290)
T 3gvx_A          187 TRGMVNSRLLANARKNLTIVNVARAD  212 (290)
T ss_dssp             TTTCBSHHHHTTCCTTCEEEECSCGG
T ss_pred             chhhhhHHHHhhhhcCceEEEeehhc
Confidence             2335677888999999999999844

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=89.58  E-value=0.55  Score=45.88  Aligned_cols=87  Identities=17%  Similarity=0.154  Sum_probs=56.8

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--cc-cc-------CceeE
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SY-AA-------HKTKI  363 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~-~~-------~~~~v  363 (474)
                      +..+.|+++|++|  -||.++++.+...|.+|+.  +++++++.+++ ++...   .+..+  +. ++       ...++
T Consensus       147 ~~g~~vlV~Ga~g--~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~~---~~~~~~~~~~~~~~~~~~~~g~D~  220 (334)
T 3qwb_A          147 KKGDYVLLFAAAG--GVGLILNQLLKMKGAHTIAVASTDEKLKIAKE-YGAEY---LINASKEDILRQVLKFTNGKGVDA  220 (334)
T ss_dssp             CTTCEEEESSTTB--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSE---EEETTTSCHHHHHHHHTTTSCEEE
T ss_pred             CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCcE---EEeCCCchHHHHHHHHhCCCCceE
Confidence            3457899999998  9999999999999999988  88888886654 44332   23222  11 11       23567


Q ss_pred             EE--EcCcCChhhhhcCCCCceeeccc
Q 011973          364 WL--VGDDLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       364 wi--vg~~i~~~eq~~a~~G~~f~~~~  388 (474)
                      ++  +|...-..-...+.+|-.++.+.
T Consensus       221 vid~~g~~~~~~~~~~l~~~G~iv~~G  247 (334)
T 3qwb_A          221 SFDSVGKDTFEISLAALKRKGVFVSFG  247 (334)
T ss_dssp             EEECCGGGGHHHHHHHEEEEEEEEECC
T ss_pred             EEECCChHHHHHHHHHhccCCEEEEEc
Confidence            66  55433333344556666666665

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=89.55  E-value=0.64  Score=49.44  Aligned_cols=86  Identities=16%  Similarity=0.137  Sum_probs=60.6

Q ss_pred             cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--Ec-
Q 011973          295 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VG-  367 (474)
Q Consensus       295 p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg-  367 (474)
                      ....++|.++|. |  .||+.+|+.|...|.+|+.  ++.++.+..++. +.+.    +   +++ . +.++++|  +| 
T Consensus       271 ~l~GktV~IiG~-G--~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~-Ga~~----~---~l~e~l~~aDvVi~atgt  339 (494)
T 3ce6_A          271 LIGGKKVLICGY-G--DVGKGCAEAMKGQGARVSVTEIDPINALQAMME-GFDV----V---TVEEAIGDADIVVTATGN  339 (494)
T ss_dssp             CCTTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCEE----C---CHHHHGGGCSEEEECSSS
T ss_pred             CCCcCEEEEEcc-C--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCEE----e---cHHHHHhCCCEEEECCCC
Confidence            345678999997 7  9999999999999999988  666666554332 2111    1   222 2 4566655  33 


Q ss_pred             -CcCChhhhhcCCCCceeecccccC
Q 011973          368 -DDLTGKEQARAPKGTIFIPYTQIP  391 (474)
Q Consensus       368 -~~i~~~eq~~a~~G~~f~~~~~v~  391 (474)
                       ..++.+....+++|++++.+++++
T Consensus       340 ~~~i~~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          340 KDIIMLEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             SCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred             HHHHHHHHHHhcCCCcEEEEeCCCC
Confidence             446667888899999999998744

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=89.54  E-value=0.53  Score=45.82  Aligned_cols=42  Identities=10%  Similarity=0.021  Sum_probs=36.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      ..+.|+++|++|  -||.++++.+...|.+|..  +++++++.+++
T Consensus       140 ~g~~vlV~Ga~g--giG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~  183 (327)
T 1qor_A          140 PDEQFLFHAAAG--GVGLIACQWAKALGAKLIGTVGTAQKAQSALK  183 (327)
T ss_dssp             TTCEEEESSTTB--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            457899999998  9999999999999999888  78888888765

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=89.48  E-value=0.4  Score=50.42  Aligned_cols=90  Identities=16%  Similarity=0.128  Sum_probs=60.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--Cc---eeEEE--EcC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HK---TKIWL--VGD  368 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~---~~vwi--vg~  368 (474)
                      +++|.++|+-   .+|+++|+.|.+.|.+|.+  |++++.+.++++.+.   ..+...++.++  ++   ++++|  |-.
T Consensus        15 ~~~IgvIGlG---~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~---~gi~~~~s~~e~v~~l~~aDvVil~Vp~   88 (480)
T 2zyd_A           15 KQQIGVVGMA---VMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPG---KKLVPYYTVKEFVESLETPRRILLMVKA   88 (480)
T ss_dssp             CBSEEEECCS---HHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTT---SCEEECSSHHHHHHTBCSSCEEEECSCS
T ss_pred             CCeEEEEccH---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCC---CCeEEeCCHHHHHhCCCCCCEEEEECCC
Confidence            5679999976   9999999999999999998  889999999887541   12222224432  33   76655  211


Q ss_pred             --cCCh--hhh-hcCCCCceeecccccCcc
Q 011973          369 --DLTG--KEQ-ARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       369 --~i~~--~eq-~~a~~G~~f~~~~~v~p~  393 (474)
                        .++.  +++ ..+++|+++++.+...+.
T Consensus        89 ~~~v~~vl~~l~~~l~~g~iIId~s~g~~~  118 (480)
T 2zyd_A           89 GAGTDAAIDSLKPYLDKGDIIIDGGNTFFQ  118 (480)
T ss_dssp             SSHHHHHHHHHGGGCCTTCEEEECSCCCHH
T ss_pred             HHHHHHHHHHHHhhcCCCCEEEECCCCCHH
Confidence              1111  122 245789999999875543

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=89.42  E-value=0.25  Score=48.53  Aligned_cols=33  Identities=18%  Similarity=0.165  Sum_probs=29.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      +.|+|+|++|  -||+++|+.|.++|.+|..  |+.+
T Consensus        25 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~   59 (375)
T 1t2a_A           25 NVALITGITG--QDGSYLAEFLLEKGYEVHGIVRRSS   59 (375)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             cEEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCcc
Confidence            5799999999  9999999999999999988  5543

>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=89.41  E-value=1.6  Score=43.85  Aligned_cols=159  Identities=13%  Similarity=0.130  Sum_probs=96.2

Q ss_pred             HHHcCCcEEEecc----cccccccc-------ccCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 011973          241 ADAKGVKVISLGL----LNQGEELN-------RNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  291 (474)
Q Consensus       241 A~k~G~kV~~LG~----ln~~e~ln-------~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvvl  291 (474)
                      +.++|.+++.|+.    +.++|.+-       ...-+.+.|+|.         ..+|+|+.|-+         +=..++.
T Consensus        67 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~  146 (309)
T 4f2g_A           67 IFQLGGHAVFMSTRDTQLGRGEPVEDSAQVISRMVDIIMIRTFEQDIIQRFAENSRVPVINGLTNEYHPCQVLADIFTYY  146 (309)
T ss_dssp             HHHTTCEEEEECCSSCEETBEECHHHHHHHHHHHCSEEEEECSCHHHHHHHHHTCSSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEcCcccccCCCCCCHHHHHHHHHHhCCEEEEecCCHHHHHHHHHhCCCCEEECCCCccCcHHHHHHHHHHH
Confidence            4579999999986    44566553       344567778876         35678887643         1145566


Q ss_pred             hcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhh-Cccccccceeeec-ccc-c-CceeEEEE
Q 011973          292 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLR-IPVEAQHNLVLST-SYA-A-HKTKIWLV  366 (474)
Q Consensus       292 ~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~-~~~~~~~~l~~~t-~~~-~-~~~~vwiv  366 (474)
                      +.... +..+|+++|..+  -+++..+.+|++-|.++.+-.++.|+- .++ +.++.+.. +..+ +.+ + ++++|+..
T Consensus       147 e~~g~l~glkva~vGD~~--~va~Sl~~~~~~~G~~v~~~~P~~~~~-~~~~~~~~~g~~-v~~~~d~~eav~~aDvvyt  222 (309)
T 4f2g_A          147 EHRGPIRGKTVAWVGDAN--NMLYTWIQAARILDFKLQLSTPPGYAL-DAKLVDAESAPF-YQVFDDPNEACKGADLVTT  222 (309)
T ss_dssp             HHHSCCTTCEEEEESCCC--HHHHHHHHHHHHHTCEEEEECCGGGCC-CGGGSCGGGGGG-EEECSSHHHHTTTCSEEEE
T ss_pred             HHhCCCCCCEEEEECCCc--chHHHHHHHHHHcCCEEEEECCcccCC-CHHHHHHHcCCe-EEEEcCHHHHhcCCCEEEe
Confidence            55432 456899999975  899999999999999999955555532 111 12223333 3344 444 4 88888776


Q ss_pred             cCcCCh---hhhhcCCCCceeecccccCcc---CCCCCee-eecCCc
Q 011973          367 GDDLTG---KEQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPA  406 (474)
Q Consensus       367 g~~i~~---~eq~~a~~G~~f~~~~~v~p~---~~R~dc~-y~~~~a  406 (474)
                      +-|.+-   +||..  .=..|-+| |+.++   ..++|+. .|.+|+
T Consensus       223 ~~w~smg~e~~~~~--r~~~~~~y-~v~~~~l~~a~~~ai~mH~lP~  266 (309)
T 4f2g_A          223 DVWTSMGFEAENEA--RKRAFADW-CVDEEMMSHANSDALFMHCLPA  266 (309)
T ss_dssp             CCC--------------CCSGGGG-CBCHHHHTTSCTTCEEEECSSC
T ss_pred             cccccCcchhhHHH--HHHHhcCc-eeCHHHHHhcCCCeEEECCCCC
Confidence            554332   22211  11234455 38887   4567876 678885

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=89.37  E-value=0.27  Score=47.61  Aligned_cols=33  Identities=21%  Similarity=0.286  Sum_probs=29.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  332 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~  332 (474)
                      -.+|+|+||+|  -||+++++.|.++|.+|..  |+.
T Consensus        21 ~~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~r~~   55 (333)
T 2q1w_A           21 MKKVFITGICG--QIGSHIAELLLERGDKVVGIDNFA   55 (333)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCS
T ss_pred             CCEEEEeCCcc--HHHHHHHHHHHHCCCEEEEEECCC
Confidence            35799999999  9999999999999999988  543

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=89.34  E-value=0.74  Score=42.60  Aligned_cols=38  Identities=13%  Similarity=0.085  Sum_probs=32.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  339 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~  339 (474)
                      ..+|+++|+ |  .+|+.+|+.|.+.|. |++  +++++.+.++
T Consensus         9 ~~~viI~G~-G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~   48 (234)
T 2aef_A            9 SRHVVICGW-S--ESTLECLRELRGSEV-FVLAEDENVRKKVLR   48 (234)
T ss_dssp             -CEEEEESC-C--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH
T ss_pred             CCEEEEECC-C--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh
Confidence            568999998 6  999999999999898 777  8888888776

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=89.30  E-value=0.39  Score=48.76  Aligned_cols=26  Identities=12%  Similarity=0.286  Sum_probs=22.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGI  325 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v  325 (474)
                      .-+|.|+||.|  .||+.++..|++...
T Consensus        24 ~vKVaViGAaG--~IG~~la~~la~~~l   49 (345)
T 4h7p_A           24 AVKVAVTGAAG--QIGYALVPLIARGAL   49 (345)
T ss_dssp             CEEEEEESTTS--HHHHHHHHHHHHTTT
T ss_pred             CCEEEEECcCc--HHHHHHHHHHHhccc
Confidence            34899999999  999999999986543

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=89.29  E-value=0.71  Score=45.35  Aligned_cols=63  Identities=17%  Similarity=0.117  Sum_probs=43.0

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcccc----ccceeeeccccc-CceeEEEE
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA----QHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~~----~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      +|.++|+ |  .+|.++|..|++.|.  .|.+  +++++.+....++....    ... +..+++++ ++++++|+
T Consensus         2 kI~VIGa-G--~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~-i~~~~~~a~~~aDvVIi   73 (304)
T 2v6b_A            2 KVGVVGT-G--FVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTR-VWHGGHSELADAQVVIL   73 (304)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCE-EEEECGGGGTTCSEEEE
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeE-EEECCHHHhCCCCEEEE
Confidence            6899999 7  999999999999998  8888  77777765444433221    111 22234455 78877664

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=89.21  E-value=0.52  Score=46.61  Aligned_cols=62  Identities=18%  Similarity=0.252  Sum_probs=43.2

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcccc----ccceeeeccccc-CceeEEE
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA----QHNLVLSTSYAA-HKTKIWL  365 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~~----~~~l~~~t~~~~-~~~~vwi  365 (474)
                      +|.++|+ |  .+|.++|..|++.|.  +|.+  +++++.+.++.++....    ... +..+++++ ++++++|
T Consensus         2 kI~VIGa-G--~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~-i~~~d~~~~~~aDvVi   72 (319)
T 1a5z_A            2 KIGIVGL-G--RVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRAN-IYAGDYADLKGSDVVI   72 (319)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCE-EEECCGGGGTTCSEEE
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcE-EEeCCHHHhCCCCEEE
Confidence            6899999 7  999999999999998  8988  78888887765432211    111 22234444 7777766

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=89.18  E-value=0.27  Score=47.05  Aligned_cols=29  Identities=17%  Similarity=0.342  Sum_probs=27.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ++|+|+|++|  -||+++++.|.++|.+|..
T Consensus         2 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~   30 (330)
T 2c20_A            2 NSILICGGAG--YIGSHAVKKLVDEGLSVVV   30 (330)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEECCCc--HHHHHHHHHHHhCCCEEEE
Confidence            4699999999  9999999999999999988

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=89.03  E-value=0.24  Score=46.51  Aligned_cols=28  Identities=11%  Similarity=0.236  Sum_probs=26.9

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +|+|+|+||  -||+++++.|.++|.+|..
T Consensus         7 ~ilVtGatG--~iG~~l~~~L~~~g~~V~~   34 (287)
T 3sc6_A            7 RVIITGANG--QLGKQLQEELNPEEYDIYP   34 (287)
T ss_dssp             EEEEESTTS--HHHHHHHHHSCTTTEEEEE
T ss_pred             EEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence            799999999  9999999999999999988

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=89.02  E-value=0.28  Score=45.60  Aligned_cols=42  Identities=12%  Similarity=0.120  Sum_probs=36.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~  342 (474)
                      ..+|.++| +|  .+|+++|+.|.+.|.+|++   |++++.++++++.
T Consensus        23 mmkI~IIG-~G--~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~   67 (220)
T 4huj_A           23 MTTYAIIG-AG--AIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF   67 (220)
T ss_dssp             SCCEEEEE-CH--HHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH
T ss_pred             CCEEEEEC-CC--HHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh
Confidence            35799999 56  9999999999999998887   8889999988764

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=89.01  E-value=0.32  Score=45.89  Aligned_cols=28  Identities=11%  Similarity=0.312  Sum_probs=25.7

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccC-cEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMG-IKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~-v~v~l  329 (474)
                      +|+|+|++|  -||+++++.|.++| .+|..
T Consensus         1 ~vlVtGatG--~iG~~l~~~L~~~g~~~V~~   29 (310)
T 1eq2_A            1 MIIVTGGAG--FIGSNIVKALNDKGITDILV   29 (310)
T ss_dssp             CEEEETTTS--HHHHHHHHHHHTTTCCCEEE
T ss_pred             CEEEEcCcc--HHHHHHHHHHHHCCCcEEEE
Confidence            489999999  99999999999999 78877

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=88.97  E-value=0.3  Score=46.85  Aligned_cols=29  Identities=24%  Similarity=0.319  Sum_probs=27.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +.|+|+||+|  -||+++++.|.++|.+|..
T Consensus         2 ~~vlVTGatG--~iG~~l~~~L~~~g~~V~~   30 (347)
T 1orr_A            2 AKLLITGGCG--FLGSNLASFALSQGIDLIV   30 (347)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             cEEEEeCCCc--hhHHHHHHHHHhCCCEEEE
Confidence            4699999999  9999999999999999988

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=88.95  E-value=0.47  Score=49.62  Aligned_cols=63  Identities=11%  Similarity=0.197  Sum_probs=47.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccccee-eec---ccc-c--CceeEEEE
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV-LST---SYA-A--HKTKIWLV  366 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~-~~t---~~~-~--~~~~vwiv  366 (474)
                      +-+|.++|+.   ++|+.+|+.|.++|..|++  +++++++++++++.-..   +. ..+   .++ +  .++++.|+
T Consensus         3 ~M~iiI~G~G---~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~---i~Gd~~~~~~L~~Agi~~ad~~ia   74 (461)
T 4g65_A            3 AMKIIILGAG---QVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRV---VNGHASHPDVLHEAGAQDADMLVA   74 (461)
T ss_dssp             CEEEEEECCS---HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEE---EESCTTCHHHHHHHTTTTCSEEEE
T ss_pred             cCEEEEECCC---HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEE---EEEcCCCHHHHHhcCCCcCCEEEE
Confidence            4479999996   9999999999999999999  89999999988764322   12 222   233 3  77787775

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=88.92  E-value=0.66  Score=45.64  Aligned_cols=63  Identities=14%  Similarity=0.191  Sum_probs=43.5

Q ss_pred             EEEEeccCCCchhHHHHHHHHhcc--CcEEEe--cchhhHHHHHhhCccc-----cccceeee-ccccc-CceeEEEE
Q 011973          300 HVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  366 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~--~v~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~-t~~~~-~~~~vwiv  366 (474)
                      +|.++|+ |  .+|.++|..|++.  |.+|.+  +++++.+.++.++...     ...+ +.. +++++ ++++++|+
T Consensus         2 kI~VIGa-G--~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~-i~~t~d~~~l~~aDvVii   75 (310)
T 1guz_A            2 KITVIGA-G--NVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTK-VTGSNDYADTANSDIVII   75 (310)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCE-EEEESCGGGGTTCSEEEE
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcE-EEECCCHHHHCCCCEEEE
Confidence            6899999 8  9999999999974  788988  7888888765433221     1122 333 35555 77877663

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}

Probab=88.87  E-value=0.55  Score=51.97  Aligned_cols=40  Identities=15%  Similarity=0.044  Sum_probs=34.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      -++|.|+|+-   .+|+.+|..|++.|.+|++  ++++..++.++
T Consensus       312 ~~kV~VIGaG---~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~  353 (725)
T 2wtb_A          312 IKKVAIIGGG---LMGSGIATALILSNYPVILKEVNEKFLEAGIG  353 (725)
T ss_dssp             CCCEEEECCS---HHHHHHHHHHHTTTCCEEEECSSHHHHHHHHH
T ss_pred             CcEEEEEcCC---HhhHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence            4579999985   9999999999999999999  88887776543

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=88.85  E-value=0.58  Score=46.88  Aligned_cols=84  Identities=13%  Similarity=0.058  Sum_probs=56.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------  366 (474)
                      ..++|.++|- |  .||+++|+.|...|.+|+.  ++.++.+..++. +       +...++++  +.++++++      
T Consensus       144 ~g~tvGIIG~-G--~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~-g-------~~~~~l~ell~~aDvV~l~~P~t~  212 (330)
T 4e5n_A          144 DNATVGFLGM-G--AIGLAMADRLQGWGATLQYHEAKALDTQTEQRL-G-------LRQVACSELFASSDFILLALPLNA  212 (330)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHH-T-------EEECCHHHHHHHCSEEEECCCCST
T ss_pred             CCCEEEEEee-C--HHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhc-C-------ceeCCHHHHHhhCCEEEEcCCCCH
Confidence            3568999996 5  9999999999999999988  443222222111 1       11113432  55666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccccC
Q 011973          367 --GDDLTGKEQARAPKGTIFIPYTQIP  391 (474)
Q Consensus       367 --g~~i~~~eq~~a~~G~~f~~~~~v~  391 (474)
                        -..++.+....+++|++++.+++-+
T Consensus       213 ~t~~li~~~~l~~mk~gailIN~arg~  239 (330)
T 4e5n_A          213 DTLHLVNAELLALVRPGALLVNPCRGS  239 (330)
T ss_dssp             TTTTCBCHHHHTTSCTTEEEEECSCGG
T ss_pred             HHHHHhCHHHHhhCCCCcEEEECCCCc
Confidence              2356678888999999999999833

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=88.83  E-value=0.64  Score=49.21  Aligned_cols=44  Identities=16%  Similarity=0.249  Sum_probs=34.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchh---hHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKD---DYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~---~~~~l~~~~  342 (474)
                      ..+.|+|+|++|  -||+++|++|+++|. +|.+  |+.+   +.+++.+++
T Consensus       258 ~~~~vLITGgtG--gIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l  307 (511)
T 2z5l_A          258 PSGTVLITGGMG--AIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEEL  307 (511)
T ss_dssp             CCSEEEEETTTS--HHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHH
Confidence            457899999999  999999999999998 4666  6553   455555554

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=88.73  E-value=0.64  Score=46.42  Aligned_cols=83  Identities=8%  Similarity=0.081  Sum_probs=55.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc------
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------  367 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg------  367 (474)
                      .++|.++|. |  .||+++|+.|...|.+|+.  |+.++ +..++. +       +..+++++  ++++++++-      
T Consensus       150 g~~vgIIG~-G--~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~-g-------~~~~~l~~~l~~aDvVil~vp~~~~  217 (334)
T 2dbq_A          150 GKTIGIIGL-G--RIGQAIAKRAKGFNMRILYYSRTRKE-EVEREL-N-------AEFKPLEDLLRESDFVVLAVPLTRE  217 (334)
T ss_dssp             TCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHH-C-------CEECCHHHHHHHCSEEEECCCCCTT
T ss_pred             CCEEEEEcc-C--HHHHHHHHHHHhCCCEEEEECCCcch-hhHhhc-C-------cccCCHHHHHhhCCEEEECCCCChH
Confidence            457999996 6  9999999999999999998  55554 333221 1       11224432  566665521      


Q ss_pred             --CcCChhhhhcCCCCceeecccccCc
Q 011973          368 --DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       368 --~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                        ..++.+....+++|++++..++.++
T Consensus       218 t~~~i~~~~~~~mk~~ailIn~srg~~  244 (334)
T 2dbq_A          218 TYHLINEERLKLMKKTAILINIARGKV  244 (334)
T ss_dssp             TTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred             HHHhhCHHHHhcCCCCcEEEECCCCcc
Confidence              2344455667999999999998443

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=88.71  E-value=0.47  Score=45.63  Aligned_cols=28  Identities=25%  Similarity=0.290  Sum_probs=26.5

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +|+|+|++|  -||+++|+.|.++|.+|..
T Consensus         2 ~vlVTGatG--~iG~~l~~~L~~~G~~V~~   29 (338)
T 1udb_A            2 RVLVTGGSG--YIGSHTCVQLLQNGHDVII   29 (338)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             EEEEECCCC--HHHHHHHHHHHHCCCEEEE
Confidence            589999999  9999999999999999987

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=88.71  E-value=0.44  Score=46.96  Aligned_cols=28  Identities=18%  Similarity=0.226  Sum_probs=26.8

Q ss_pred             EEEEeccCCCchhHHHHHHHHh-ccCcEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLC-QMGIKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~-~~~v~v~l  329 (474)
                      .|+|+|++|  -||+++|+.|. ++|.+|.+
T Consensus         4 ~vlVTGatG--~iG~~l~~~L~~~~g~~V~~   32 (397)
T 1gy8_A            4 RVLVCGGAG--YIGSHFVRALLRDTNHSVVI   32 (397)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHHCCCEEEE
T ss_pred             EEEEECCCC--HHHHHHHHHHHHhCCCEEEE
Confidence            799999999  99999999999 99999988

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=88.66  E-value=0.44  Score=48.23  Aligned_cols=86  Identities=10%  Similarity=0.074  Sum_probs=56.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------  366 (474)
                      ..++|.++|. |  .||+++|+.|...|.+|+.  ++.++  ...++.+.+      ...+.++  +.++++++      
T Consensus       167 ~g~tvGIIG~-G--~IG~~vA~~l~~~G~~V~~~d~~~~~--~~~~~~g~~------~~~~l~ell~~aDvV~l~~P~t~  235 (347)
T 1mx3_A          167 RGETLGIIGL-G--RVGQAVALRAKAFGFNVLFYDPYLSD--GVERALGLQ------RVSTLQDLLFHSDCVTLHCGLNE  235 (347)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHTTTCEEEEECTTSCT--THHHHHTCE------ECSSHHHHHHHCSEEEECCCCCT
T ss_pred             CCCEEEEEeE-C--HHHHHHHHHHHHCCCEEEEECCCcch--hhHhhcCCe------ecCCHHHHHhcCCEEEEcCCCCH
Confidence            4568999996 4  9999999999999999988  33332  111111111      1113332  55666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccccCcc
Q 011973          367 --GDDLTGKEQARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       367 --g~~i~~~eq~~a~~G~~f~~~~~v~p~  393 (474)
                        ...++.+.+..+++|+++|.+++-++.
T Consensus       236 ~t~~li~~~~l~~mk~gailIN~arg~~v  264 (347)
T 1mx3_A          236 HNHHLINDFTVKQMRQGAFLVNTARGGLV  264 (347)
T ss_dssp             TCTTSBSHHHHTTSCTTEEEEECSCTTSB
T ss_pred             HHHHHhHHHHHhcCCCCCEEEECCCChHH
Confidence              234667788899999999999995544

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=88.57  E-value=0.45  Score=46.73  Aligned_cols=39  Identities=13%  Similarity=0.194  Sum_probs=31.4

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCc-EEEe--c--chhhHHHHHh
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGI-KVAT--I--CKDDYEKLKL  340 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~--~~~~~~~l~~  340 (474)
                      +|+|+||||  -||+++++.|.++|. +|..  |  +.+.++++-+
T Consensus         2 ~VlVtGatG--~iG~~l~~~L~~~g~~~v~~~d~~~d~~~l~~~~~   45 (369)
T 3st7_A            2 NIVITGAKG--FVGKNLKADLTSTTDHHIFEVHRQTKEEELESALL   45 (369)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHHCCCEEEECCTTCCHHHHHHHHH
T ss_pred             EEEEECCCC--HHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHhc
Confidence            699999999  999999999999998 8887  4  4455554433

>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*

Probab=88.55  E-value=0.63  Score=46.73  Aligned_cols=84  Identities=17%  Similarity=0.237  Sum_probs=58.5

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc
Q 011973          285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA  357 (474)
Q Consensus       285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~  357 (474)
                      -|.+.|++-+     +-.-++|+|+|...  -||+-+|..|.++|-.|++  .....+++.               +   
T Consensus       161 cTp~gv~~lL~~~~i~l~Gk~vvViGRS~--iVGkPla~LL~~~~ATVTi~Hs~T~dl~~~---------------~---  220 (303)
T 4b4u_A          161 ATPAGIMTILKENNIEIAGKHAVVVGRSA--ILGKPMAMMLLQANATVTICHSRTQNLPEL---------------V---  220 (303)
T ss_dssp             HHHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTCSSHHHH---------------H---
T ss_pred             ccHHHHHHHHHHHCCCCCCCEEEEEeccc--cccchHHHHHHhcCCEEEEecCCCCCHHHH---------------h---
Confidence            4666666555     33678999999997  9999999999999999999  111111111               0   


Q ss_pred             cCceeEEEE--c--CcCChhhhhcCCCCceeecccccCcc
Q 011973          358 AHKTKIWLV--G--DDLTGKEQARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       358 ~~~~~vwiv--g--~~i~~~eq~~a~~G~~f~~~~~v~p~  393 (474)
                       +.+||+|+  |  .-++++.   .++|+++||+. +.+.
T Consensus       221 -~~ADIvV~A~G~p~~i~~d~---vk~GavVIDVG-in~~  255 (303)
T 4b4u_A          221 -KQADIIVGAVGKAELIQKDW---IKQGAVVVDAG-FHPR  255 (303)
T ss_dssp             -HTCSEEEECSCSTTCBCGGG---SCTTCEEEECC-CBCC
T ss_pred             -hcCCeEEeccCCCCcccccc---ccCCCEEEEec-eecC
Confidence             35666663  2  2355554   59999999998 7665

>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*

Probab=88.51  E-value=0.89  Score=47.13  Aligned_cols=96  Identities=10%  Similarity=0.204  Sum_probs=65.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCc---EEEecchhhHHHHHhhCccccccceeeeccccc-CceeEEE----Ec--
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGI---KVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWL----VG--  367 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v---~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-~~~~vwi----vg--  367 (474)
                      .++|+|.|++|  -+|...++.+.+.|.   .|+..+...    ..+ +..          +++ +++||+|    +|  
T Consensus       214 ~~kV~ViG~~G--~vG~~A~~~a~~lGa~~~~V~v~D~~~----~~~-g~~----------~~~i~~aDivIn~vlig~~  276 (394)
T 2qrj_A          214 KPTVLIIGALG--RCGSGAIDLLHKVGIPDANILKWDIKE----TSR-GGP----------FDEIPQADIFINCIYLSKP  276 (394)
T ss_dssp             CCCEEEETTTS--HHHHHHHHHHHHTTCCGGGEEEECHHH----HTT-CSC----------CTHHHHSSEEEECCCCCSS
T ss_pred             CCeEEEEcCCC--HHHHHHHHHHHhCCCCcCceEEeeccc----ccc-CCc----------hhhHhhCCEEEECcCcCCC
Confidence            67999999999  999999999999997   788722211    000 110          111 2445555    22  


Q ss_pred             --CcCChhhhhcC-CCCceeecccccCcc------CCCCCeeeecCCccccCC
Q 011973          368 --DDLTGKEQARA-PKGTIFIPYTQIPPR------KLRKDCFYHSTPAMIIPP  411 (474)
Q Consensus       368 --~~i~~~eq~~a-~~G~~f~~~~~v~p~------~~R~dc~y~~~~am~vP~  411 (474)
                        ..++.|+++++ +||+++||+| .++-      +....|+-++.|.....+
T Consensus       277 aP~Lvt~e~v~~m~k~gsVIVDVA-~D~GG~~et~~f~~~~Tt~~~P~~~~~g  328 (394)
T 2qrj_A          277 IAPFTNMEKLNNPNRRLRTVVDVS-ADTTNPHNPIPIYTVATVFNKPTVLVPT  328 (394)
T ss_dssp             CCCSCCHHHHCCTTCCCCEEEETT-CCTTCTTCSSCSCCCCCBTTBCCEEECC
T ss_pred             CCcccCHHHHhcCcCCCeEEEEEe-cCCCCCcCcccccccCCccCCCEEEECC
Confidence              44899999999 9999999999 7764      333347777777765554

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=88.49  E-value=0.73  Score=45.43  Aligned_cols=64  Identities=16%  Similarity=0.179  Sum_probs=44.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccc-----cccceeee-ccccc-CceeEEEE
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  366 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~-t~~~~-~~~~vwiv  366 (474)
                      .+|.++|| |  .+|+.+|..|++.|. +|.|  +++++++....++...     .... +.. +++++ ++++++|.
T Consensus         3 ~kI~VIGa-G--~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~-i~~t~d~~a~~~aD~Vi~   76 (309)
T 1ur5_A            3 KKISIIGA-G--FVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVR-VTGTNNYADTANSDVIVV   76 (309)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCC-EEEESCGGGGTTCSEEEE
T ss_pred             CEEEEECC-C--HHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeE-EEECCCHHHHCCCCEEEE
Confidence            47999999 8  999999999998886 8777  6777776554443332     1222 333 46655 88887663

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=88.43  E-value=0.67  Score=46.78  Aligned_cols=105  Identities=13%  Similarity=0.059  Sum_probs=66.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC-cc----cc--ccceeeec-ccc-c-CceeEE
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI-PV----EA--QHNLVLST-SYA-A-HKTKIW  364 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~-~~----~~--~~~l~~~t-~~~-~-~~~~vw  364 (474)
                      ...+|.++|+ |  .+|.++|..|++.|.+|++  |++++.+.++++- ..    +.  ..+ +..+ +.+ + ++++++
T Consensus        28 ~~mkI~VIGa-G--~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~-i~~t~d~~ea~~~aDvV  103 (356)
T 3k96_A           28 FKHPIAILGA-G--SWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPET-LKAYCDLKASLEGVTDI  103 (356)
T ss_dssp             CCSCEEEECC-S--HHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTT-EEEESCHHHHHTTCCEE
T ss_pred             cCCeEEEECc-c--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCC-eEEECCHHHHHhcCCEE
Confidence            4468999998 4  9999999999999999999  8889999998762 11    11  012 2233 444 3 777776


Q ss_pred             EEc-------CcCChhhhhcCCCCceeecccc-cCccC------C-----CCCeeeecCCc
Q 011973          365 LVG-------DDLTGKEQARAPKGTIFIPYTQ-IPPRK------L-----RKDCFYHSTPA  406 (474)
Q Consensus       365 ivg-------~~i~~~eq~~a~~G~~f~~~~~-v~p~~------~-----R~dc~y~~~~a  406 (474)
                      |+-       +.++. =....++|++++..+. +++..      +     ..+|.+..+|.
T Consensus       104 ilaVp~~~~~~vl~~-i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~~~~~vlsgP~  163 (356)
T 3k96_A          104 LIVVPSFAFHEVITR-MKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVPMAVISGPS  163 (356)
T ss_dssp             EECCCHHHHHHHHHH-HGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCSCCEEEEESSC
T ss_pred             EECCCHHHHHHHHHH-HHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCCCCEEEEECcc
Confidence            631       11110 0123678998888766 55431      1     13566667765

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=88.36  E-value=0.68  Score=46.91  Aligned_cols=81  Identities=16%  Similarity=0.260  Sum_probs=55.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------  366 (474)
                      ..++|-++|- |  .||+++|+.|...|.+|+.  |+..+-+...     +.    ....++++  +.++++++      
T Consensus       172 ~gktvGIIGl-G--~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-----g~----~~~~~l~ell~~sDvV~l~~Plt~  239 (345)
T 4g2n_A          172 TGRRLGIFGM-G--RIGRAIATRARGFGLAIHYHNRTRLSHALEE-----GA----IYHDTLDSLLGASDIFLIAAPGRP  239 (345)
T ss_dssp             TTCEEEEESC-S--HHHHHHHHHHHTTTCEEEEECSSCCCHHHHT-----TC----EECSSHHHHHHTCSEEEECSCCCG
T ss_pred             CCCEEEEEEe-C--hhHHHHHHHHHHCCCEEEEECCCCcchhhhc-----CC----eEeCCHHHHHhhCCEEEEecCCCH
Confidence            3578999996 5  9999999999999999998  4332222111     11    11224433  56666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc
Q 011973          367 --GDDLTGKEQARAPKGTIFIPYTQ  389 (474)
Q Consensus       367 --g~~i~~~eq~~a~~G~~f~~~~~  389 (474)
                        -..++.+.+..+|+|+++|.++|
T Consensus       240 ~T~~li~~~~l~~mk~gailIN~aR  264 (345)
T 4g2n_A          240 ELKGFLDHDRIAKIPEGAVVINISR  264 (345)
T ss_dssp             GGTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             HHHHHhCHHHHhhCCCCcEEEECCC
Confidence              24467888899999999999998

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=88.32  E-value=0.4  Score=49.02  Aligned_cols=43  Identities=19%  Similarity=0.228  Sum_probs=37.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccC-c--EEEe--cchhhHHHHHhhCcc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMG-I--KVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~-v--~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ++|+++|| |  .||+++|+.|++.| +  +|.+  |+.++.+++.++++.
T Consensus         2 ~kVlIiGa-G--giG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~   49 (405)
T 4ina_A            2 AKVLQIGA-G--GVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKA   49 (405)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhh
Confidence            47999999 7  89999999999887 3  7877  999999999888654

>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A

Probab=88.31  E-value=1.9  Score=43.11  Aligned_cols=163  Identities=16%  Similarity=0.161  Sum_probs=100.3

Q ss_pred             HHHcCCcEEEeccc----cccccc-------cccCceeeecCCC---------CcceeeecCChh---------HHHHHH
Q 011973          241 ADAKGVKVISLGLL----NQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSSL---------AAAVVV  291 (474)
Q Consensus       241 A~k~G~kV~~LG~l----n~~e~l-------n~~g~l~v~k~p~---------~L~irvv~Gnsl---------taAvvl  291 (474)
                      +.++|.+++.|+.=    +++|.+       ....-+.+.|+|.         ..+++|+.|-+-         =..++.
T Consensus        61 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~  140 (307)
T 2i6u_A           61 IAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIA  140 (307)
T ss_dssp             HHHTTCEEEEEEGGGSGGGGTCCHHHHHHHHHHHEEEEEEECSSHHHHHHHHHHCSSCEEESCCSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEECCccccCCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHhhCCCCEEcCCCCCcCccHHHHHHHHHH
Confidence            45799999999753    335543       3445667888876         345788877541         134555


Q ss_pred             hcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhH------HHHHhhCccccccceeeec-ccc-c-Cce
Q 011973          292 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY------EKLKLRIPVEAQHNLVLST-SYA-A-HKT  361 (474)
Q Consensus       292 ~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~------~~l~~~~~~~~~~~l~~~t-~~~-~-~~~  361 (474)
                      +.... +..+|+++|.. -|-+++..+.+|++-|.+|.+-.++.|      .+..++...+.+.. +..+ +.+ + +++
T Consensus       141 e~~g~l~gl~va~vGD~-~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~-~~~~~d~~eav~~a  218 (307)
T 2i6u_A          141 ERKGALRGLRLSYFGDG-ANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGAS-VTVTADAHAAAAGA  218 (307)
T ss_dssp             HHHSCCTTCEEEEESCT-TSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCC-EEEESCHHHHHTTC
T ss_pred             HHhCCcCCeEEEEECCC-CcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCe-EEEEECHHHHhcCC
Confidence            55432 45689999997 138999999999999999999333322      11112222223333 3334 444 4 899


Q ss_pred             eEEEEcCcCChhhhhcCCCC-ceeecccccCcc---CCCCCee-eecCCc
Q 011973          362 KIWLVGDDLTGKEQARAPKG-TIFIPYTQIPPR---KLRKDCF-YHSTPA  406 (474)
Q Consensus       362 ~vwivg~~i~~~eq~~a~~G-~~f~~~~~v~p~---~~R~dc~-y~~~~a  406 (474)
                      +|+..+-|.+..++...+.- -.|-+| |++++   ..++|+. .|.+|+
T Consensus       219 Dvvy~~~w~smg~~~~~~~~~~~~~~y-~v~~~~l~~a~~~ai~mH~lP~  267 (307)
T 2i6u_A          219 DVLVTDTWTSMGQENDGLDRVKPFRPF-QLNSRLLALADSDAIVLHCLPA  267 (307)
T ss_dssp             SEEEECCSSCTTCTTSCCCSSGGGGGG-CBCHHHHHHSCTTCEEEECSCC
T ss_pred             CEEEecceecCCcccchHHHHHHHhhc-CCCHHHHhhcCCCcEEECCCCC
Confidence            99998888765433222211 234455 38877   4567886 788886

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=88.27  E-value=0.92  Score=44.99  Aligned_cols=42  Identities=17%  Similarity=0.157  Sum_probs=36.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      ..+.|+++|++|  -||.++++.+...|.+|..  +++++++.+++
T Consensus       170 ~g~~vlV~Gasg--giG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~  213 (351)
T 1yb5_A          170 AGESVLVHGASG--GVGLAACQIARAYGLKILGTAGTEEGQKIVLQ  213 (351)
T ss_dssp             TTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred             CcCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Confidence            456899999998  9999999999999999887  78888886543

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=88.20  E-value=0.74  Score=44.29  Aligned_cols=47  Identities=13%  Similarity=0.182  Sum_probs=38.7

Q ss_pred             cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          295 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       295 p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+..++|++.|++|  .||.++++.+...|.+|..  +++++++.+++ ++.
T Consensus       123 ~~~g~~vlV~Ga~G--~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga  171 (302)
T 1iz0_A          123 ARPGEKVLVQAAAG--ALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LGA  171 (302)
T ss_dssp             CCTTCEEEESSTTB--HHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TTC
T ss_pred             CCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cCC
Confidence            45567899999998  9999999988889999887  78888888754 443

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=88.19  E-value=0.93  Score=45.06  Aligned_cols=66  Identities=20%  Similarity=0.295  Sum_probs=43.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcccc--ccce-eeeccccc-CceeEEEE
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA--QHNL-VLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~~--~~~l-~~~t~~~~-~~~~vwiv  366 (474)
                      ..+|.++|| |  .||.+++..|...+.  .+.|  +++++++....++....  ..++ +....+++ ++++++|+
T Consensus         5 ~~KI~IiGa-G--~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii   78 (318)
T 1ez4_A            5 HQKVVLVGD-G--AVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVI   78 (318)
T ss_dssp             BCEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEE
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEE
Confidence            468999999 8  999999999997775  6766  77777775554443321  0111 22223455 88888775

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=88.18  E-value=0.57  Score=45.35  Aligned_cols=84  Identities=11%  Similarity=0.166  Sum_probs=55.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc---EEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEcCcCC
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI---KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGDDLT  371 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v---~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg~~i~  371 (474)
                      .+|.++|+ |  .+|+++|+.|.+.|.   +|.+  |++++.++++++.+-      ...++.. . ++++++|+--  .
T Consensus         4 ~~I~iIG~-G--~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi------~~~~~~~~~~~~aDvVilav--~   72 (280)
T 3tri_A            4 SNITFIGG-G--NMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGV------HTTQDNRQGALNADVVVLAV--K   72 (280)
T ss_dssp             SCEEEESC-S--HHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCC------EEESCHHHHHSSCSEEEECS--C
T ss_pred             CEEEEEcc-c--HHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCC------EEeCChHHHHhcCCeEEEEe--C
Confidence            46899999 5  999999999999998   8888  899999999886421      1122443 3 6777766311  1


Q ss_pred             hh-------hhhc--CCCCceeecccc-cCcc
Q 011973          372 GK-------EQAR--APKGTIFIPYTQ-IPPR  393 (474)
Q Consensus       372 ~~-------eq~~--a~~G~~f~~~~~-v~p~  393 (474)
                      |.       +...  .+++++++..+- ++..
T Consensus        73 p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~  104 (280)
T 3tri_A           73 PHQIKMVCEELKDILSETKILVISLAVGVTTP  104 (280)
T ss_dssp             GGGHHHHHHHHHHHHHTTTCEEEECCTTCCHH
T ss_pred             HHHHHHHHHHHHhhccCCCeEEEEecCCCCHH
Confidence            21       1111  477777776543 5544

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=88.11  E-value=0.36  Score=47.66  Aligned_cols=34  Identities=18%  Similarity=0.245  Sum_probs=29.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKD  333 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~  333 (474)
                      ..+|+|+||+|  -||+++++.|.++| .+|..  |+.+
T Consensus        32 ~~~ilVtGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~   68 (377)
T 2q1s_A           32 NTNVMVVGGAG--FVGSNLVKRLLELGVNQVHVVDNLLS   68 (377)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCSEEEEECCCTT
T ss_pred             CCEEEEECCcc--HHHHHHHHHHHHcCCceEEEEECCCC
Confidence            45899999999  99999999999999 88887  5443

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=88.06  E-value=0.62  Score=47.14  Aligned_cols=78  Identities=19%  Similarity=0.231  Sum_probs=55.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE-------
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  366 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv-------  366 (474)
                      .++|.++|--   .||+++|+.|...|.+|+.  ++.++      +....     +...++++  +.++++++       
T Consensus       148 gktvgIiGlG---~IG~~vA~~l~~~G~~V~~~d~~~~~------~~~~~-----~~~~~l~ell~~aDvV~l~~Plt~~  213 (343)
T 2yq5_A          148 NLTVGLIGVG---HIGSAVAEIFSAMGAKVIAYDVAYNP------EFEPF-----LTYTDFDTVLKEADIVSLHTPLFPS  213 (343)
T ss_dssp             GSEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSCCG------GGTTT-----CEECCHHHHHHHCSEEEECCCCCTT
T ss_pred             CCeEEEEecC---HHHHHHHHHHhhCCCEEEEECCChhh------hhhcc-----ccccCHHHHHhcCCEEEEcCCCCHH
Confidence            5689999974   9999999999999999998  44432      11110     21224443  56666552       


Q ss_pred             -cCcCChhhhhcCCCCceeecccc
Q 011973          367 -GDDLTGKEQARAPKGTIFIPYTQ  389 (474)
Q Consensus       367 -g~~i~~~eq~~a~~G~~f~~~~~  389 (474)
                       -..++.+.+..+++|+++|.++|
T Consensus       214 t~~li~~~~l~~mk~gailIN~aR  237 (343)
T 2yq5_A          214 TENMIGEKQLKEMKKSAYLINCAR  237 (343)
T ss_dssp             TTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             HHHHhhHHHHhhCCCCcEEEECCC
Confidence             23567788889999999999998

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=88.05  E-value=0.58  Score=46.61  Aligned_cols=55  Identities=13%  Similarity=0.049  Sum_probs=41.8

Q ss_pred             hhHHHHHHhcC--cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          284 SLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       284 sltaAvvl~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      -+||+-.+...  .+..+.|++.||+|  -||.++++.+...|.+|..  +++++++.+++
T Consensus       148 ~~ta~~al~~~~~~~~g~~VlV~Ga~G--~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~  206 (362)
T 2c0c_A          148 GTTAYISLKELGGLSEGKKVLVTAAAG--GTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS  206 (362)
T ss_dssp             HHHHHHHHHHHTCCCTTCEEEETTTTB--TTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEeCCCc--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence            34555555332  23456899999998  9999999999889999887  78888888765

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=88.00  E-value=0.34  Score=51.29  Aligned_cols=43  Identities=21%  Similarity=0.167  Sum_probs=36.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      .+.|+|+|| |  -+|+|+|..|++.|.+|.+  |+.++.+++.++++
T Consensus       364 ~k~vlV~Ga-G--Gig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~  408 (523)
T 2o7s_A          364 SKTVVVIGA-G--GAGKALAYGAKEKGAKVVIANRTYERALELAEAIG  408 (523)
T ss_dssp             --CEEEECC-S--HHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT
T ss_pred             CCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC
Confidence            457999999 4  7999999999999999888  89999999988874

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=87.95  E-value=0.89  Score=44.72  Aligned_cols=42  Identities=14%  Similarity=0.167  Sum_probs=36.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhcc-CcEEEe--cchhhHHHHHh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l--~~~~~~~~l~~  340 (474)
                      ..+.|+++|+.|  -||.++++.+.+. |.+|..  +++++++.+++
T Consensus       170 ~g~~vlV~Gagg--~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~  214 (347)
T 1jvb_A          170 PTKTLLVVGAGG--GLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR  214 (347)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred             CCCEEEEECCCc--cHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence            456899999986  9999999999988 999887  78888887754

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=87.94  E-value=0.21  Score=47.71  Aligned_cols=29  Identities=14%  Similarity=0.204  Sum_probs=25.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ++|+|+|++|  -||+++|+.|.++|..+.+
T Consensus         2 ~~vlVTGatG--~iG~~l~~~L~~~g~~v~~   30 (313)
T 3ehe_A            2 SLIVVTGGAG--FIGSHVVDKLSESNEIVVI   30 (313)
T ss_dssp             -CEEEETTTS--HHHHHHHHHHTTTSCEEEE
T ss_pred             CEEEEECCCc--hHHHHHHHHHHhCCCEEEE
Confidence            3699999999  9999999999999966666

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=87.93  E-value=0.34  Score=50.67  Aligned_cols=37  Identities=16%  Similarity=0.118  Sum_probs=32.1

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhc-cCcEEEe--cchhh
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT--ICKDD  334 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~-~~v~v~l--~~~~~  334 (474)
                      ++.+.|+|+|+++  =||+|+|+.|++ .|.+|.+  |++++
T Consensus        59 ~~gKvaLVTGASs--GIG~AiA~~LA~~~GA~Vv~~~r~~~~   98 (422)
T 3s8m_A           59 DGPKKVLVIGASS--GYGLASRITAAFGFGADTLGVFFEKPG   98 (422)
T ss_dssp             SSCSEEEEESCSS--HHHHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred             cCCCEEEEECCCh--HHHHHHHHHHHHhCCCEEEEEeCCchh
Confidence            4678899999996  999999999999 9999988  66554

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=87.85  E-value=0.39  Score=47.37  Aligned_cols=31  Identities=19%  Similarity=0.143  Sum_probs=27.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ....|+|+|++|  -||+++|+.|.++|.+|..
T Consensus        10 ~~~~vlVTG~tG--fIG~~l~~~L~~~G~~V~~   40 (404)
T 1i24_A           10 HGSRVMVIGGDG--YCGWATALHLSKKNYEVCI   40 (404)
T ss_dssp             --CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCCeEEEeCCCc--HHHHHHHHHHHhCCCeEEE
Confidence            356899999999  9999999999999999988

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=87.84  E-value=0.93  Score=44.64  Aligned_cols=87  Identities=15%  Similarity=0.126  Sum_probs=56.0

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-ccc-c-------CceeEE
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYA-A-------HKTKIW  364 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t-~~~-~-------~~~~vw  364 (474)
                      +..+.|++.|++|  -||.++++.+...|.+|+.  +++++++.+++. +.+.   ++..+ +.. +       ...+++
T Consensus       158 ~~g~~VlV~Gasg--~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-ga~~---v~~~~~~~~~~v~~~~~~~g~Dvv  231 (342)
T 4eye_A          158 RAGETVLVLGAAG--GIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV-GADI---VLPLEEGWAKAVREATGGAGVDMV  231 (342)
T ss_dssp             CTTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH-TCSE---EEESSTTHHHHHHHHTTTSCEEEE
T ss_pred             CCCCEEEEECCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-CCcE---EecCchhHHHHHHHHhCCCCceEE
Confidence            3467899999998  9999999999999999987  788888877653 3322   22222 111 1       246777


Q ss_pred             E--EcCcCChhhhhcCCCCceeeccc
Q 011973          365 L--VGDDLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       365 i--vg~~i~~~eq~~a~~G~~f~~~~  388 (474)
                      +  +|...-..-...+.+|-.++.+.
T Consensus       232 id~~g~~~~~~~~~~l~~~G~iv~~G  257 (342)
T 4eye_A          232 VDPIGGPAFDDAVRTLASEGRLLVVG  257 (342)
T ss_dssp             EESCC--CHHHHHHTEEEEEEEEEC-
T ss_pred             EECCchhHHHHHHHhhcCCCEEEEEE
Confidence            6  55443344444556666676665

>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}

Probab=87.81  E-value=2.2  Score=44.47  Aligned_cols=86  Identities=17%  Similarity=0.179  Sum_probs=55.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--------c------cccceeeec-cccc-C
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--------E------AQHNLVLST-SYAA-H  359 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~--------~------~~~~l~~~t-~~~~-~  359 (474)
                      -.+|.|+|+-   .+|+++|..|++.|.+|++  +++++++..++.+..        +      ....+...+ ++++ +
T Consensus        37 ~~kV~VIGaG---~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~  113 (463)
T 1zcj_A           37 VSSVGVLGLG---TMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELS  113 (463)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGGGT
T ss_pred             CCEEEEECcC---HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHHHC
Confidence            4679999984   9999999999999999999  788888776553211        0      001112223 5554 7


Q ss_pred             ceeEEE--EcCcCChhh-----h-hcCCCCceeec
Q 011973          360 KTKIWL--VGDDLTGKE-----Q-ARAPKGTIFIP  386 (474)
Q Consensus       360 ~~~vwi--vg~~i~~~e-----q-~~a~~G~~f~~  386 (474)
                      +++++|  |.+.++-++     . ..+++|++++.
T Consensus       114 ~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~s  148 (463)
T 1zcj_A          114 TVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCT  148 (463)
T ss_dssp             TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence            787766  433221111     1 24688999886

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=87.75  E-value=0.39  Score=48.28  Aligned_cols=80  Identities=14%  Similarity=0.084  Sum_probs=55.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc------
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------  367 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg------  367 (474)
                      .++|.++|. |  .||+++|+.|...|.+|+.  |+.++.+        +.    ...+++++  ++++++++-      
T Consensus       164 g~~vgIIG~-G--~iG~~vA~~l~~~G~~V~~~dr~~~~~~--------g~----~~~~~l~ell~~aDvVil~vP~~~~  228 (333)
T 3ba1_A          164 GKRVGIIGL-G--RIGLAVAERAEAFDCPISYFSRSKKPNT--------NY----TYYGSVVELASNSDILVVACPLTPE  228 (333)
T ss_dssp             TCCEEEECC-S--HHHHHHHHHHHTTTCCEEEECSSCCTTC--------CS----EEESCHHHHHHTCSEEEECSCCCGG
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHHCCCEEEEECCCchhcc--------Cc----eecCCHHHHHhcCCEEEEecCCChH
Confidence            457999997 5  9999999999999999988  4443211        11    11224432  667776532      


Q ss_pred             --CcCChhhhhcCCCCceeecccccCc
Q 011973          368 --DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       368 --~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                        ..++.+....+++|++++.+++.++
T Consensus       229 t~~li~~~~l~~mk~gailIn~srG~~  255 (333)
T 3ba1_A          229 TTHIINREVIDALGPKGVLINIGRGPH  255 (333)
T ss_dssp             GTTCBCHHHHHHHCTTCEEEECSCGGG
T ss_pred             HHHHhhHHHHhcCCCCCEEEECCCCch
Confidence              3455567778899999999998443

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=87.73  E-value=0.3  Score=52.72  Aligned_cols=30  Identities=17%  Similarity=0.248  Sum_probs=28.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.|+|+||+|  -||+++|+.|.++|.+|.+
T Consensus        11 ~~~ilVTGatG--~IG~~l~~~L~~~G~~V~~   40 (699)
T 1z45_A           11 SKIVLVTGGAG--YIGSHTVVELIENGYDCVV   40 (699)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCcCEEEE
Confidence            46899999999  9999999999999999988

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=87.72  E-value=0.48  Score=47.28  Aligned_cols=81  Identities=15%  Similarity=0.195  Sum_probs=55.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------  366 (474)
                      ..++|.++|.-   .||+++|+.|...|.+|+.  |+.+..+.    +..     .....++++  +.++++++      
T Consensus       138 ~g~tvGIiG~G---~IG~~vA~~l~~~G~~V~~~dr~~~~~~~----~~~-----~~~~~~l~ell~~aDiV~l~~Plt~  205 (315)
T 3pp8_A          138 EEFSVGIMGAG---VLGAKVAESLQAWGFPLRCWSRSRKSWPG----VES-----YVGREELRAFLNQTRVLINLLPNTA  205 (315)
T ss_dssp             TTCCEEEECCS---HHHHHHHHHHHTTTCCEEEEESSCCCCTT----CEE-----EESHHHHHHHHHTCSEEEECCCCCG
T ss_pred             CCCEEEEEeeC---HHHHHHHHHHHHCCCEEEEEcCCchhhhh----hhh-----hcccCCHHHHHhhCCEEEEecCCch
Confidence            35689999975   9999999999999999998  44432110    000     000123433  56666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc
Q 011973          367 --GDDLTGKEQARAPKGTIFIPYTQ  389 (474)
Q Consensus       367 --g~~i~~~eq~~a~~G~~f~~~~~  389 (474)
                        -..++.+....+++|++++.++|
T Consensus       206 ~t~~li~~~~l~~mk~gailIN~aR  230 (315)
T 3pp8_A          206 QTVGIINSELLDQLPDGAYVLNLAR  230 (315)
T ss_dssp             GGTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             hhhhhccHHHHhhCCCCCEEEECCC
Confidence              23466788889999999999998

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=87.72  E-value=0.56  Score=48.79  Aligned_cols=44  Identities=11%  Similarity=0.302  Sum_probs=34.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc--hhhHHHHHhhC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLRI  342 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~--~~~~~~l~~~~  342 (474)
                      ..+.++|+|++|  -||+++|++|+++|.+|++  |+  .++++++.+++
T Consensus       212 ~gk~~LVTGgsg--GIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~  259 (454)
T 3u0b_A          212 DGKVAVVTGAAR--GIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV  259 (454)
T ss_dssp             TTCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred             CCCEEEEeCCch--HHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc
Confidence            457899999998  9999999999999999998  43  34444444443

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=87.68  E-value=1.1  Score=45.60  Aligned_cols=108  Identities=14%  Similarity=0.184  Sum_probs=68.2

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--c---------cccceeeecccc-c-CceeEE
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--E---------AQHNLVLSTSYA-A-HKTKIW  364 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~--~---------~~~~l~~~t~~~-~-~~~~vw  364 (474)
                      +|.++|+ |  .+|.++|..|++ |.+|+.  +++++.+.+++....  +         ...++...++.+ + ++++++
T Consensus         2 kI~VIG~-G--~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvv   77 (402)
T 1dlj_A            2 KIAVAGS-G--YVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELV   77 (402)
T ss_dssp             EEEEECC-S--HHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEE
T ss_pred             EEEEECC-C--HHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEE
Confidence            5889998 5  999999999999 999988  889999999876321  0         011222223443 3 566665


Q ss_pred             E--EcCcCCh--------------hhhhcCCCCceeecccccCcc---C----CCCCeeeecCCccccCCC
Q 011973          365 L--VGDDLTG--------------KEQARAPKGTIFIPYTQIPPR---K----LRKDCFYHSTPAMIIPPS  412 (474)
Q Consensus       365 i--vg~~i~~--------------~eq~~a~~G~~f~~~~~v~p~---~----~R~dc~y~~~~am~vP~~  412 (474)
                      |  |....++              ++...+.+|++++.-|+++|.   +    +.++ .+..+|...-|+.
T Consensus        78 iiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~~~~~-~v~~~Pe~~~~G~  147 (402)
T 1dlj_A           78 IIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQKFQTD-RIIFSPEFLRESK  147 (402)
T ss_dssp             EECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHHTTCS-CEEECCCCCCTTS
T ss_pred             EEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHHhCCC-eEEECCccccCcc
Confidence            5  4443210              112225789999987888886   2    2233 4445566656665

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=87.64  E-value=1.2  Score=42.15  Aligned_cols=82  Identities=10%  Similarity=0.071  Sum_probs=53.6

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE--cCc--CC
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV--GDD--LT  371 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv--g~~--i~  371 (474)
                      +|.++|+ |  .+|+++|..|.+ |.+|.+  |++++.+.++++   +  .. . .+ .+ . ++++++|+  ...  +.
T Consensus         3 ~i~iiG~-G--~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~---g--~~-~-~~-~~~~~~~~D~vi~~v~~~~~~~   70 (289)
T 2cvz_A            3 KVAFIGL-G--AMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE---F--GS-E-AV-PLERVAEARVIFTCLPTTREVY   70 (289)
T ss_dssp             CEEEECC-S--TTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH---H--CC-E-EC-CGGGGGGCSEEEECCSSHHHHH
T ss_pred             eEEEEcc-c--HHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC---C--Cc-c-cC-HHHHHhCCCEEEEeCCChHHHH
Confidence            5889997 5  899999999999 999988  888888888765   1  11 1 11 32 2 56666553  111  11


Q ss_pred             h--hhh-hcCCCCceeecccccCcc
Q 011973          372 G--KEQ-ARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       372 ~--~eq-~~a~~G~~f~~~~~v~p~  393 (474)
                      .  ++. ..+++|+++++.+..++.
T Consensus        71 ~v~~~l~~~l~~~~~vv~~s~~~~~   95 (289)
T 2cvz_A           71 EVAEALYPYLREGTYWVDATSGEPE   95 (289)
T ss_dssp             HHHHHHTTTCCTTEEEEECSCCCHH
T ss_pred             HHHHHHHhhCCCCCEEEECCCCCHH
Confidence            0  111 246789999988765543

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=87.63  E-value=0.42  Score=45.49  Aligned_cols=28  Identities=25%  Similarity=0.423  Sum_probs=26.6

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +|+|+|++|  -||+++|+.|.++|.+|..
T Consensus         2 ~vlVTGatG--~iG~~l~~~L~~~G~~V~~   29 (311)
T 2p5y_A            2 RVLVTGGAG--FIGSHIVEDLLARGLEVAV   29 (311)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHTTTCEEEE
T ss_pred             EEEEEeCCc--HHHHHHHHHHHHCCCEEEE
Confidence            589999999  9999999999999999987

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=87.62  E-value=0.61  Score=44.38  Aligned_cols=40  Identities=15%  Similarity=0.193  Sum_probs=35.8

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      .+|.++|+ |  .+|+++|..|.+.|.+|++  |++++.+.++++
T Consensus         4 m~i~iiG~-G--~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~   45 (316)
T 2ew2_A            4 MKIAIAGA-G--AMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN   45 (316)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CeEEEECc-C--HHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC
Confidence            36999997 6  9999999999999999998  888999998876

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=87.58  E-value=0.79  Score=45.30  Aligned_cols=82  Identities=10%  Similarity=0.126  Sum_probs=55.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc-----
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG-----  367 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg-----  367 (474)
                      ..++|.++|. |  .||+++|+.|...|.+|..  ++.++ +.. .+.+.+       ..+.++  +.++++++-     
T Consensus       141 ~g~~vgIiG~-G--~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~-~~~g~~-------~~~l~ell~~aDvV~l~~p~~~  208 (307)
T 1wwk_A          141 EGKTIGIIGF-G--RIGYQVAKIANALGMNILLYDPYPNE-ERA-KEVNGK-------FVDLETLLKESDVVTIHVPLVE  208 (307)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSCCH-HHH-HHTTCE-------ECCHHHHHHHCSEEEECCCCST
T ss_pred             CCceEEEEcc-C--HHHHHHHHHHHHCCCEEEEECCCCCh-hhH-hhcCcc-------ccCHHHHHhhCCEEEEecCCCh
Confidence            3457999996 5  9999999999999999988  55544 222 222211       113332  556665532     


Q ss_pred             ---CcCChhhhhcCCCCceeeccccc
Q 011973          368 ---DDLTGKEQARAPKGTIFIPYTQI  390 (474)
Q Consensus       368 ---~~i~~~eq~~a~~G~~f~~~~~v  390 (474)
                         ..++.+.+..+++|++++.+++-
T Consensus       209 ~t~~li~~~~l~~mk~ga~lin~arg  234 (307)
T 1wwk_A          209 STYHLINEERLKLMKKTAILINTSRG  234 (307)
T ss_dssp             TTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred             HHhhhcCHHHHhcCCCCeEEEECCCC
Confidence               33556677889999999999983

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=87.52  E-value=0.33  Score=47.29  Aligned_cols=29  Identities=10%  Similarity=0.295  Sum_probs=26.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccC-cEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMG-IKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l  329 (474)
                      +.|+|+|++|  -||+++++.|.++| .+|..
T Consensus        47 ~~vlVtGatG--~iG~~l~~~L~~~g~~~V~~   76 (357)
T 2x6t_A           47 RMIIVTGGAG--FIGSNIVKALNDKGITDILV   76 (357)
T ss_dssp             -CEEEETTTS--HHHHHHHHHHHHTTCCCEEE
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCcEEEE
Confidence            5799999999  99999999999999 78877

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=87.51  E-value=0.43  Score=44.19  Aligned_cols=42  Identities=21%  Similarity=0.206  Sum_probs=34.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      ...+|.++| +|  .+|+++|+.|.+.|.+|.+  |++++.+.++++
T Consensus        27 ~~~~I~iiG-~G--~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~   70 (215)
T 2vns_A           27 EAPKVGILG-SG--DFARSLATRLVGSGFKVVVGSRNPKRTARLFPS   70 (215)
T ss_dssp             --CCEEEEC-CS--HHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBT
T ss_pred             CCCEEEEEc-cC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc
Confidence            345799999 67  9999999999999999888  888888777553

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=87.50  E-value=0.44  Score=47.27  Aligned_cols=78  Identities=14%  Similarity=0.130  Sum_probs=53.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc-----
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG-----  367 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg-----  367 (474)
                      ..++|.++|. |  .||+++|+.|...|.+|..  |+.++.+              +...+.++  +.++++++-     
T Consensus       143 ~g~~vgIIG~-G--~IG~~~A~~l~~~G~~V~~~d~~~~~~~--------------~~~~~l~ell~~aDvV~l~~p~~~  205 (311)
T 2cuk_A          143 QGLTLGLVGM-G--RIGQAVAKRALAFGMRVVYHARTPKPLP--------------YPFLSLEELLKEADVVSLHTPLTP  205 (311)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSCCSSS--------------SCBCCHHHHHHHCSEEEECCCCCT
T ss_pred             CCCEEEEEEE-C--HHHHHHHHHHHHCCCEEEEECCCCcccc--------------cccCCHHHHHhhCCEEEEeCCCCh
Confidence            3467999996 5  9999999999999999988  4433211              11113322  456665522     


Q ss_pred             ---CcCChhhhhcCCCCceeecccccC
Q 011973          368 ---DDLTGKEQARAPKGTIFIPYTQIP  391 (474)
Q Consensus       368 ---~~i~~~eq~~a~~G~~f~~~~~v~  391 (474)
                         ..++.+....+++|++++++++-+
T Consensus       206 ~t~~li~~~~l~~mk~ga~lin~srg~  232 (311)
T 2cuk_A          206 ETHRLLNRERLFAMKRGAILLNTARGA  232 (311)
T ss_dssp             TTTTCBCHHHHTTSCTTCEEEECSCGG
T ss_pred             HHHhhcCHHHHhhCCCCcEEEECCCCC
Confidence               335567788899999999999843

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=87.44  E-value=0.79  Score=45.44  Aligned_cols=64  Identities=16%  Similarity=0.133  Sum_probs=38.5

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcc-----ccccceeeeccccc-CceeEEEE
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPV-----EAQHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~-----~~~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      +|.++|| |  .||+++|..|..++.  .+.|  .++++.+-....+..     .....+...++|++ ++++|+|+
T Consensus         2 KV~IiGa-G--~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvi   75 (294)
T 2x0j_A            2 KLGFVGA-G--RVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVV   75 (294)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEE
T ss_pred             EEEEECc-C--HHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEE
Confidence            5899996 8  999999999885543  3555  555544433222221     11122223335666 88888776

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=87.34  E-value=0.54  Score=49.41  Aligned_cols=41  Identities=27%  Similarity=0.259  Sum_probs=35.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhcc-CcEEEe--cchhhHHHHHhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l--~~~~~~~~l~~~  341 (474)
                      .++|+|+|| |  .+|+++|..|++. |.+|++  |+.++.++++++
T Consensus        23 ~k~VlIiGA-G--giG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~   66 (467)
T 2axq_A           23 GKNVLLLGS-G--FVAQPVIDTLAANDDINVTVACRTLANAQALAKP   66 (467)
T ss_dssp             CEEEEEECC-S--TTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG
T ss_pred             CCEEEEECC-h--HHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh
Confidence            457999998 7  8999999999987 788888  888999888765

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=87.30  E-value=0.47  Score=45.79  Aligned_cols=30  Identities=13%  Similarity=0.306  Sum_probs=27.6

Q ss_pred             CcEEEEecc----------------CCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGT----------------VTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Ga----------------tg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.|+|+|+                +|  ++|+|+|++|+++|.+|++
T Consensus         3 gk~vlVTgG~T~E~IDpVR~ItN~SSG--~mG~aiA~~~~~~Ga~V~l   48 (232)
T 2gk4_A            3 AMKILVTSGGTSEAIDSVRSITNHSTG--HLGKIITETLLSAGYEVCL   48 (232)
T ss_dssp             CCEEEEECSBCEEESSSSEEEEECCCC--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEeCCCcccccCceeeccCCCCC--HHHHHHHHHHHHCCCEEEE
Confidence            357899988                88  9999999999999999999

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=87.30  E-value=0.87  Score=46.53  Aligned_cols=81  Identities=15%  Similarity=0.140  Sum_probs=55.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------  366 (474)
                      ..++|-++|--   .||+++|+.|...|.+|+.  ++.. -+..++ .+.       ...++++  +.++++++      
T Consensus       175 ~gktvGIIGlG---~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~~-~g~-------~~~~l~ell~~aDvV~l~~Plt~  242 (365)
T 4hy3_A          175 AGSEIGIVGFG---DLGKALRRVLSGFRARIRVFDPWLP-RSMLEE-NGV-------EPASLEDVLTKSDFIFVVAAVTS  242 (365)
T ss_dssp             SSSEEEEECCS---HHHHHHHHHHTTSCCEEEEECSSSC-HHHHHH-TTC-------EECCHHHHHHSCSEEEECSCSSC
T ss_pred             CCCEEEEecCC---cccHHHHHhhhhCCCEEEEECCCCC-HHHHhh-cCe-------eeCCHHHHHhcCCEEEEcCcCCH
Confidence            35689999964   9999999999999999998  3321 111111 111       1124433  56666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc
Q 011973          367 --GDDLTGKEQARAPKGTIFIPYTQ  389 (474)
Q Consensus       367 --g~~i~~~eq~~a~~G~~f~~~~~  389 (474)
                        -..++.+....+++|++++.++|
T Consensus       243 ~T~~li~~~~l~~mk~gailIN~aR  267 (365)
T 4hy3_A          243 ENKRFLGAEAFSSMRRGAAFILLSR  267 (365)
T ss_dssp             C---CCCHHHHHTSCTTCEEEECSC
T ss_pred             HHHhhcCHHHHhcCCCCcEEEECcC
Confidence              23577888999999999999998

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=87.28  E-value=0.41  Score=44.46  Aligned_cols=30  Identities=27%  Similarity=0.275  Sum_probs=27.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhc-cCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~-~~v~v~l  329 (474)
                      .+.|+++|++|  -||+++|+.|++ .|.+|.+
T Consensus         4 ~k~vlITGas~--gIG~~~a~~l~~~~g~~v~~   34 (244)
T 4e4y_A            4 MANYLVTGGSK--GIGKAVVELLLQNKNHTVIN   34 (244)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHTTSTTEEEEE
T ss_pred             CCeEEEeCCCC--hHHHHHHHHHHhcCCcEEEE
Confidence            35799999998  999999999998 8888888

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=87.20  E-value=0.99  Score=45.07  Aligned_cols=64  Identities=14%  Similarity=0.195  Sum_probs=43.5

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccc-----cccceeee-ccccc-CceeEEEE
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  366 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~-t~~~~-~~~~vwiv  366 (474)
                      .+|.++|+ |  .+|+++|..|++.+. .+.|  +++++.+....++...     .... +.. +++++ ++++++|+
T Consensus         6 ~kI~iiGa-G--~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~-v~~t~d~~a~~~aDvVIi   79 (321)
T 3p7m_A            6 KKITLVGA-G--NIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFK-VRGTNDYKDLENSDVVIV   79 (321)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCC-EEEESCGGGGTTCSEEEE
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcE-EEEcCCHHHHCCCCEEEE
Confidence            57999996 7  999999999998888 7777  7777766444333221     2223 332 35556 88877664

>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}

Probab=87.07  E-value=3.1  Score=41.93  Aligned_cols=162  Identities=17%  Similarity=0.175  Sum_probs=91.9

Q ss_pred             HHHcCCcEEEecc----ccccccc-------cccCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 011973          241 ADAKGVKVISLGL----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  291 (474)
Q Consensus       241 A~k~G~kV~~LG~----ln~~e~l-------n~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvvl  291 (474)
                      +.++|.+++.|+.    +.++|.+       ....-+.+.|+|.         ..+|+|+.|-+         +=..++.
T Consensus        70 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~iviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~  149 (323)
T 3gd5_A           70 MYQLGGQVIDLSPSNTQVGRGEPVRDTARVLGRYVDGLAIRTFAQTELEEYAHYAGIPVINALTDHEHPCQVVADLLTIR  149 (323)
T ss_dssp             HHHTTCEEEEC----------CCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHCSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEeCcccccCCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHH
Confidence            4579999999974    3446654       4445567778876         23466775544         1134555


Q ss_pred             hcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhH-------HHHHhhCccccccceeeec-ccc-c-Cc
Q 011973          292 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-------EKLKLRIPVEAQHNLVLST-SYA-A-HK  360 (474)
Q Consensus       292 ~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~-------~~l~~~~~~~~~~~l~~~t-~~~-~-~~  360 (474)
                      +.... +..+|+++|..+  -+++..+.+|++.|.++.+-.++.|       +..++ ...+.+.. +..+ +.+ + ++
T Consensus       150 e~~g~l~glkva~vGD~~--rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~-~a~~~g~~-v~~~~d~~eav~~  225 (323)
T 3gd5_A          150 ENFGRLAGLKLAYVGDGN--NVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASE-IAGRTGAE-VQILRDPFEAARG  225 (323)
T ss_dssp             HHHSCCTTCEEEEESCCC--HHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHH-HHHHHTCC-EEEESCHHHHHTT
T ss_pred             HHhCCCCCCEEEEECCCC--cHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHH-HHHHcCCe-EEEECCHHHHhcC
Confidence            54432 467999999985  9999999999999999998333222       22222 11222333 3344 444 4 88


Q ss_pred             eeEEEEcCcCChhhhh-cCCCCceeecccccCcc---CCCCCee-eecCCcc
Q 011973          361 TKIWLVGDDLTGKEQA-RAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM  407 (474)
Q Consensus       361 ~~vwivg~~i~~~eq~-~a~~G~~f~~~~~v~p~---~~R~dc~-y~~~~am  407 (474)
                      ++|+..+-|.+..+.. ....-..|-+| |+..+   ..++|+. .|.+|+-
T Consensus       226 aDvvyt~~wqs~g~~~~~~~~~~~~~~y-~vt~ell~~ak~dai~mHclPa~  276 (323)
T 3gd5_A          226 AHILYTDVWTSMGQEAETQHRLQLFEQY-QINAALLNCAAAEAIVLHCLPAH  276 (323)
T ss_dssp             CSEEEECCCC---------CCHHHHTTC-CBCHHHHHTSCTTCEEEECSCCC
T ss_pred             CCEEEEeceecCCCcccchHHHHHhhcc-CCCHHHHhhcCCCcEEECCCCCC
Confidence            9998887776543221 11111233444 38877   4567876 6778853

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=87.06  E-value=1.4  Score=46.07  Aligned_cols=115  Identities=15%  Similarity=0.217  Sum_probs=73.8

Q ss_pred             cCCCcEEEEeccCCCchhHHHHHHHHhcc--CcEEEe--cchhhHHHHHhh-Ccc-cc----------ccceeeecccc-
Q 011973          295 PKTTAHVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKLR-IPV-EA----------QHNLVLSTSYA-  357 (474)
Q Consensus       295 p~~~~~V~l~Gatg~~kig~ava~~L~~~--~v~v~l--~~~~~~~~l~~~-~~~-~~----------~~~l~~~t~~~-  357 (474)
                      |....+|.++|+-   .+|.++|..|++.  |.+|++  +++++.+.|++. .+- +.          ...+...++++ 
T Consensus         6 ~~~~mkI~VIG~G---~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~   82 (481)
T 2o3j_A            6 FGKVSKVVCVGAG---YVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPK   82 (481)
T ss_dssp             SCCCCEEEEECCS---TTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHH
T ss_pred             CCCCCEEEEECCC---HHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHH
Confidence            3334589999975   8999999999988  789998  899999999864 211 01          01222333543 


Q ss_pred             c-CceeEEE--EcCcCCh------------------hh-hhcCCCCceeecccccCcc--C---------CC----CCee
Q 011973          358 A-HKTKIWL--VGDDLTG------------------KE-QARAPKGTIFIPYTQIPPR--K---------LR----KDCF  400 (474)
Q Consensus       358 ~-~~~~vwi--vg~~i~~------------------~e-q~~a~~G~~f~~~~~v~p~--~---------~R----~dc~  400 (474)
                      + ++++++|  |+...+.                  ++ ...+++|+++++-|.+||.  +         .+    .|+.
T Consensus        83 ~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~d~~  162 (481)
T 2o3j_A           83 AIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENLKFQ  162 (481)
T ss_dssp             HHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----CCEE
T ss_pred             HhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCCceE
Confidence            3 6666644  5554321                  11 1246889999998888775  1         22    3455


Q ss_pred             eecCCccccCCC
Q 011973          401 YHSTPAMIIPPS  412 (474)
Q Consensus       401 y~~~~am~vP~~  412 (474)
                      +..+|...-|+.
T Consensus       163 v~~~Pe~~~~G~  174 (481)
T 2o3j_A          163 VLSNPEFLAEGT  174 (481)
T ss_dssp             EEECCCCCCTTC
T ss_pred             EEeCcccccccc
Confidence            667776666665

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=87.03  E-value=0.47  Score=45.56  Aligned_cols=30  Identities=17%  Similarity=0.293  Sum_probs=27.4

Q ss_pred             CcEEEEecc----------------CCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGT----------------VTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Ga----------------tg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.|+|+|+                +|  ++|+|+|+.|+++|.+|++
T Consensus         8 gk~vlVTgG~T~E~iDpVR~itN~SSg--~iG~aiA~~~~~~Ga~V~l   53 (226)
T 1u7z_A            8 HLNIMITAGPTREPLDPVRYISDHSSG--KMGFAIAAAAARRGANVTL   53 (226)
T ss_dssp             TCEEEEEESBCEEESSSSEEEEECCCS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEECCCCCcccCceeeccCCCcc--HHHHHHHHHHHHCCCEEEE
Confidence            467999998                57  9999999999999999998

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=87.02  E-value=0.93  Score=44.27  Aligned_cols=65  Identities=14%  Similarity=0.158  Sum_probs=44.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccC--cEEEe--cchhhHHHHHhhCcccc---ccce-eeeccccc-CceeEEEE
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLRIPVEA---QHNL-VLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~--v~v~l--~~~~~~~~l~~~~~~~~---~~~l-~~~t~~~~-~~~~vwiv  366 (474)
                      .+|.++| .|  .+|.++|..|++.|  .+|.+  +++++.+.++.++....   ...+ +..+++++ ++++++|+
T Consensus         2 ~kI~VIG-aG--~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~aDvVii   75 (309)
T 1hyh_A            2 RKIGIIG-LG--NVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVIS   75 (309)
T ss_dssp             CEEEEEC-CS--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEE
T ss_pred             CEEEEEC-CC--HHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCHHHhCCCCEEEE
Confidence            3689999 56  99999999999988  57888  88888888776543211   0111 11235544 77877663

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=86.98  E-value=0.53  Score=45.68  Aligned_cols=30  Identities=23%  Similarity=0.296  Sum_probs=27.1

Q ss_pred             CcEEEEecc--CCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGT--VTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Ga--tg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.|+|+|+  ++  -||+++|+.|+++|.+|.+
T Consensus         9 gk~~lVTGa~~s~--GIG~aia~~la~~G~~Vv~   40 (315)
T 2o2s_A            9 GQTAFVAGVADSH--GYGWAIAKHLASAGARVAL   40 (315)
T ss_dssp             TCEEEEECCSSSS--SHHHHHHHHHHTTTCEEEE
T ss_pred             CCEEEEeCCCCCC--ChHHHHHHHHHHCCCEEEE
Confidence            467999998  65  8999999999999999988

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=86.93  E-value=0.37  Score=46.72  Aligned_cols=33  Identities=21%  Similarity=0.142  Sum_probs=28.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccC-----cEEEe--cchh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMG-----IKVAT--ICKD  333 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~-----v~v~l--~~~~  333 (474)
                      ++|+|+||||  -||+++++.|.++|     .+|..  |+.+
T Consensus         2 ~~vlVtGatG--~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~   41 (364)
T 2v6g_A            2 SVALIVGVTG--IIGNSLAEILPLADTPGGPWKVYGVARRTR   41 (364)
T ss_dssp             EEEEEETTTS--HHHHHHHHHTTSTTCTTCSEEEEEEESSCC
T ss_pred             CEEEEECCCc--HHHHHHHHHHHhCCCCCCceEEEEEeCCCC
Confidence            4799999999  99999999999999     88877  5543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=86.87  E-value=0.6  Score=49.42  Aligned_cols=43  Identities=19%  Similarity=0.276  Sum_probs=33.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cc---hhhHHHHHhhC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC---KDDYEKLKLRI  342 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~---~~~~~~l~~~~  342 (474)
                      .+.|+|+|++|  -||+++|++|+++|. +|++  |+   .+..+++.+++
T Consensus       239 ~~~vLITGgsg--GIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l  287 (496)
T 3mje_A          239 HGSVLVTGGTG--GIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAEL  287 (496)
T ss_dssp             CSEEEEETCSS--HHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHH
T ss_pred             CCEEEEECCCC--chHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHH
Confidence            37899999998  999999999999998 6666  54   34455665554

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=86.87  E-value=0.82  Score=43.10  Aligned_cols=83  Identities=16%  Similarity=0.210  Sum_probs=52.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh--------------HHHHHhhCccccccceeeecccc-c-
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD--------------YEKLKLRIPVEAQHNLVLSTSYA-A-  358 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~--------------~~~l~~~~~~~~~~~l~~~t~~~-~-  358 (474)
                      ...+|.++|+ |  .+|+++|+.|.+.|.+|++  |++++              ++++.++.+.      ...++.+ . 
T Consensus        18 ~~~kIgiIG~-G--~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~e~~   88 (245)
T 3dtt_A           18 QGMKIAVLGT-G--TVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPH------VHLAAFADVA   88 (245)
T ss_dssp             -CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTT------CEEEEHHHHH
T ss_pred             CCCeEEEECC-C--HHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCc------eeccCHHHHH
Confidence            4678999995 4  9999999999999999999  77776              5555554321      1123443 3 


Q ss_pred             CceeEEEE--cCcCChh---hh-hcCCCCceeeccc
Q 011973          359 HKTKIWLV--GDDLTGK---EQ-ARAPKGTIFIPYT  388 (474)
Q Consensus       359 ~~~~vwiv--g~~i~~~---eq-~~a~~G~~f~~~~  388 (474)
                      ++++++|+  -..-..+   +. ....+|+++++.+
T Consensus        89 ~~aDvVilavp~~~~~~~~~~i~~~~l~g~ivi~~s  124 (245)
T 3dtt_A           89 AGAELVVNATEGASSIAALTAAGAENLAGKILVDIA  124 (245)
T ss_dssp             HHCSEEEECSCGGGHHHHHHHHCHHHHTTSEEEECC
T ss_pred             hcCCEEEEccCcHHHHHHHHHhhhhhcCCCEEEECC
Confidence            56767552  1110011   11 1123789999998

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=86.85  E-value=0.47  Score=45.17  Aligned_cols=29  Identities=24%  Similarity=0.226  Sum_probs=27.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+|+|+|++|  -||+++++.|.++|.+|..
T Consensus         4 ~~ilVtGatG--~iG~~l~~~L~~~g~~v~~   32 (321)
T 1e6u_A            4 QRVFIAGHRG--MVGSAIRRQLEQRGDVELV   32 (321)
T ss_dssp             EEEEEETTTS--HHHHHHHHHHTTCTTEEEE
T ss_pred             CEEEEECCCc--HHHHHHHHHHHhCCCeEEE
Confidence            5799999999  9999999999999998876

>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A

Probab=86.85  E-value=1.2  Score=44.99  Aligned_cols=162  Identities=17%  Similarity=0.198  Sum_probs=97.9

Q ss_pred             HHHcCCcEEEecccc----ccccc-------cccCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 011973          241 ADAKGVKVISLGLLN----QGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  291 (474)
Q Consensus       241 A~k~G~kV~~LG~ln----~~e~l-------n~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvvl  291 (474)
                      +.++|.+++.|+.=+    ++|.+       ....-+.+.|+|.         ..+++|+.|-+         +=..++.
T Consensus        68 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~  147 (321)
T 1oth_A           68 FALLGGHPCFLTTQDIHLGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEASIPIINGLSDLYHPIQILADYLTLQ  147 (321)
T ss_dssp             HHHTTCEEEEEETTTSCBTTTBCHHHHHHHHHHHCSEEEEECSCHHHHHHHHHHCSSCEEESCCSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEECCCcCcCCCCCCHHHHHHHHHHhCCEEEEeCCChhHHHHHHHhCCCCEEcCCCCCCCcHHHHHHHHHHH
Confidence            457999999997533    35543       4456677888876         34678887754         1134555


Q ss_pred             hcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhH------HHHHhhCccccccceeeec-ccc-c-Cce
Q 011973          292 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY------EKLKLRIPVEAQHNLVLST-SYA-A-HKT  361 (474)
Q Consensus       292 ~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~------~~l~~~~~~~~~~~l~~~t-~~~-~-~~~  361 (474)
                      +.... +..+|+++|...  -+++..+.+|++-|.+|.+-.++.|      .+..++...+.+.. +..+ +.+ + +++
T Consensus       148 e~~g~l~gl~va~vGD~~--~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~-~~~~~d~~eav~~a  224 (321)
T 1oth_A          148 EHYSSLKGLTLSWIGDGN--NILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTK-LLLTNDPLEAAHGG  224 (321)
T ss_dssp             HHHSCCTTCEEEEESCSS--HHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCC-EEEESCHHHHHTTC
T ss_pred             HHhCCcCCcEEEEECCch--hhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCe-EEEEECHHHHhccC
Confidence            54432 456899999974  7999999999999999999333322      22222222223333 3334 444 4 889


Q ss_pred             eEEEEcCcCChh-hhhcCCCCceeecccccCcc---CCCCCee-eecCCc
Q 011973          362 KIWLVGDDLTGK-EQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPA  406 (474)
Q Consensus       362 ~vwivg~~i~~~-eq~~a~~G~~f~~~~~v~p~---~~R~dc~-y~~~~a  406 (474)
                      +|+..+-|++-+ |..+.++=..|-+| |++.+   ..++|+. .|.+|+
T Consensus       225 Dvvy~d~w~s~g~e~~~~~~~~~~~~y-~v~~~~l~~a~~dai~mH~lP~  273 (321)
T 1oth_A          225 NVLITDTWISMGREEEKKKRLQAFQGY-QVTMKTAKVAASDWTFLHCLPR  273 (321)
T ss_dssp             SEEEECCSSCTTCGGGHHHHHHHTTTC-CBCHHHHHTSCTTCEEEECSCC
T ss_pred             CEEEEeccccccchhhhHHHHHhccCc-eECHHHHhhcCCCCEEECCCCC
Confidence            998887777621 11111110113344 47777   5568886 788886

>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1

Probab=86.80  E-value=3.5  Score=41.61  Aligned_cols=163  Identities=18%  Similarity=0.229  Sum_probs=96.1

Q ss_pred             HHHcCCcEEEecccc----ccccc-------cccCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 011973          241 ADAKGVKVISLGLLN----QGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  291 (474)
Q Consensus       241 A~k~G~kV~~LG~ln----~~e~l-------n~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvvl  291 (474)
                      +.++|.+++.|+.=+    ++|.+       ....-+.+.|+|.         ..+++|+.|-+         +=..++.
T Consensus        80 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~  159 (325)
T 1vlv_A           80 FAEEGGHPIFLSPNDIHLGAKESLEDTARVLGRMVDAIMFRGYKQETVEKLAEYSGVPVYNGLTDEFHPTQALADLMTIE  159 (325)
T ss_dssp             HHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHCSCEEESCCSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEECCccccCCCCcCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHH
Confidence            457999999997533    35543       4556777888876         24577776644         1134444


Q ss_pred             hcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHH---HH---HhhCccccccceeeec-ccc-c-Cce
Q 011973          292 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KL---KLRIPVEAQHNLVLST-SYA-A-HKT  361 (474)
Q Consensus       292 ~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~---~l---~~~~~~~~~~~l~~~t-~~~-~-~~~  361 (474)
                      +.... +..+|+++|.. .|-+++..+.+|++-|.+|.+-.++.|+   .+   .++...+.+.. +..+ +.+ + +++
T Consensus       160 e~~g~l~gl~va~vGD~-~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~-v~~~~d~~eav~~a  237 (325)
T 1vlv_A          160 ENFGRLKGVKVVFMGDT-RNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGS-VSFTSNLEEALAGA  237 (325)
T ss_dssp             HHHSCSTTCEEEEESCT-TSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCE-EEEESCHHHHHTTC
T ss_pred             HHhCCcCCcEEEEECCC-CcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCe-EEEEcCHHHHHccC
Confidence            44332 35689999995 1489999999999999999993333331   12   11222223333 3334 444 4 889


Q ss_pred             eEEEEcCcCChhhhhcCCCC-ceeecccccCcc---CC-CCCee-eecCCc
Q 011973          362 KIWLVGDDLTGKEQARAPKG-TIFIPYTQIPPR---KL-RKDCF-YHSTPA  406 (474)
Q Consensus       362 ~vwivg~~i~~~eq~~a~~G-~~f~~~~~v~p~---~~-R~dc~-y~~~~a  406 (474)
                      +|+..+-|.+..++...+.- -.|-+| |++++   .. ++|+. .|.+|+
T Consensus       238 Dvvyt~~w~smg~~~~~~~~~~~~~~y-~v~~ell~~a~k~dai~mH~LP~  287 (325)
T 1vlv_A          238 DVVYTDVWASMGEEDKEKERMALLKPY-QVNERVMEMTGKSETIFMHCLPA  287 (325)
T ss_dssp             SEEEECCCC----------CHHHHGGG-CBCHHHHHTTCCTTCEEEECSCC
T ss_pred             CEEEeccccccccccchHhHHHHHhhc-CCCHHHHHhccCCCeEEECCCCC
Confidence            99888777654433211211 223445 38887   55 77876 788886

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=86.78  E-value=0.43  Score=49.90  Aligned_cols=34  Identities=21%  Similarity=0.184  Sum_probs=30.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      .+|+|+||||  -||+++++.|.++|.+|..  |+.++
T Consensus       148 m~VLVTGatG--~IG~~l~~~L~~~G~~V~~l~R~~~~  183 (516)
T 3oh8_A          148 LTVAITGSRG--LVGRALTAQLQTGGHEVIQLVRKEPK  183 (516)
T ss_dssp             CEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCCCC
Confidence            5799999999  9999999999999999988  66553

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=86.74  E-value=0.97  Score=44.33  Aligned_cols=99  Identities=10%  Similarity=0.083  Sum_probs=61.3

Q ss_pred             hhHHHHHHhc-C-cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--cc-
Q 011973          284 SLAAAVVVNS-L-PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SY-  356 (474)
Q Consensus       284 sltaAvvl~~-i-p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~-  356 (474)
                      -+||+..+.. . .+..+.|++.|+.|  -||.++++.+...|.+|..  +++++++.+++ ++.+.   .+..+  +. 
T Consensus       129 ~~ta~~~~~~~~~~~~g~~VlV~Ga~g--~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lga~~---~~~~~~~~~~  202 (340)
T 3gms_A          129 PLTAWVTCTETLNLQRNDVLLVNACGS--AIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LGAAY---VIDTSTAPLY  202 (340)
T ss_dssp             HHHHHHHHHTTSCCCTTCEEEESSTTS--HHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCSE---EEETTTSCHH
T ss_pred             HHHHHHHHHHhcccCCCCEEEEeCCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-CCCcE---EEeCCcccHH
Confidence            3455555532 2 23457899999997  9999999998889999888  78888888776 33322   23222  11 


Q ss_pred             cc-------CceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 011973          357 AA-------HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       357 ~~-------~~~~vwi--vg~~i~~~eq~~a~~G~~f~~~~  388 (474)
                      ++       ...+++|  +|.....+-...+.+|-.++.+.
T Consensus       203 ~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G  243 (340)
T 3gms_A          203 ETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIG  243 (340)
T ss_dssp             HHHHHHTTTSCEEEEEESSCHHHHHHHHHTEEEEEEEEECC
T ss_pred             HHHHHHhCCCCCcEEEECCCChhHHHHHHHhcCCCEEEEEe
Confidence            11       2457766  44333333334455666666665

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=86.66  E-value=0.29  Score=46.35  Aligned_cols=34  Identities=18%  Similarity=0.318  Sum_probs=28.9

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhcc--CcEEEe--cchhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDD  334 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~--~v~v~l--~~~~~  334 (474)
                      ++|+|+|++|  -||+++++.|.++  |.+|..  |+.++
T Consensus         3 ~~vlVtGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~   40 (312)
T 2yy7_A            3 PKILIIGACG--QIGTELTQKLRKLYGTENVIASDIRKLN   40 (312)
T ss_dssp             CCEEEETTTS--HHHHHHHHHHHHHHCGGGEEEEESCCCS
T ss_pred             ceEEEECCcc--HHHHHHHHHHHHhCCCCEEEEEcCCCcc
Confidence            4699999999  9999999999988  888887  55443

>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...

Probab=86.64  E-value=5.2  Score=40.06  Aligned_cols=156  Identities=14%  Similarity=0.211  Sum_probs=90.3

Q ss_pred             HHHcCCcEEEeccc------cccc-------cccccCceeeecCCC---------Cc-ceeeecCCh----------hHH
Q 011973          241 ADAKGVKVISLGLL------NQGE-------ELNRNGEIYLERQPN---------KL-KIKVVDGSS----------LAA  287 (474)
Q Consensus       241 A~k~G~kV~~LG~l------n~~e-------~ln~~g~l~v~k~p~---------~L-~irvv~Gns----------lta  287 (474)
                      +.++|.+++.|+.=      .++|       -|....-+.+.|+|.         .. +++|+.|-+          +=.
T Consensus        63 ~~~LGg~~i~l~~~~~~S~~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~~vPVINag~G~~~HPtQaLaDl  142 (310)
T 3csu_A           63 MHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDL  142 (310)
T ss_dssp             HHTTTCEEEEESCC-----CCSHHHHHHHHHHHTTTCSEEEEEESSTTHHHHHHHHCTTCCEEEEEETTSCCHHHHHHHH
T ss_pred             HHHhCCeEEEeCCCccchhhccCCcHHHHHHHHHHhCCEEEEECCChhHHHHHHHhcCCCCEEcCccCCCCCchHHHHHH
Confidence            46799999999633      2333       456677778888885         24 678877432          123


Q ss_pred             HHHHhcCcC-CCcEEEEeccCCCchhHHHHHHHHhcc-CcEEEecchhhH---HHHHhhCccccccceeeec-ccc-c-C
Q 011973          288 AVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDY---EKLKLRIPVEAQHNLVLST-SYA-A-H  359 (474)
Q Consensus       288 Avvl~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l~~~~~~---~~l~~~~~~~~~~~l~~~t-~~~-~-~  359 (474)
                      .++.+.... +..+|+++|...-|-+++..+.+|++- |.+|.+-.++.|   +.+.+.+. +.+.. +..+ +.+ + +
T Consensus       143 ~Ti~e~~g~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~-~~g~~-~~~~~d~~eav~  220 (310)
T 3csu_A          143 FTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLD-EKGIA-WSLHSSIEEVMA  220 (310)
T ss_dssp             HHHHHHHSCSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHH-HTTCC-EEECSCGGGTTT
T ss_pred             HHHHHHhCCcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHH-HcCCe-EEEEcCHHHHhc
Confidence            455554432 456899999862127999999999999 999999444333   12222211 22333 3344 444 4 8


Q ss_pred             ceeEEEEcCcCChh-----hhhcCCCCceeecccccCcc---CCCCCee-eecCC
Q 011973          360 KTKIWLVGDDLTGK-----EQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTP  405 (474)
Q Consensus       360 ~~~vwivg~~i~~~-----eq~~a~~G~~f~~~~~v~p~---~~R~dc~-y~~~~  405 (474)
                      +++|+..+-| ..|     |..+     .+-+| |++.+   ..++|+. .|.+|
T Consensus       221 ~aDvvyt~~~-q~er~~~~~~~~-----~~~~y-~v~~~ll~~a~~~ai~mH~lP  268 (310)
T 3csu_A          221 EVDILYMTRV-QKERLDPSEYAN-----VKAQF-VLRASDLHNAKANMKVLHPLP  268 (310)
T ss_dssp             TCSEEEECC-----------------------C-CBCGGGGTTCCTTCEEECCSC
T ss_pred             CCCEEEECCc-cccccCHHHHHH-----Hhhcc-CCCHHHHhhcCCCCEEECCCC
Confidence            8888887655 322     2211     12234 47777   3457875 66666

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=86.60  E-value=0.61  Score=50.20  Aligned_cols=37  Identities=22%  Similarity=0.229  Sum_probs=31.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhcc-CcEEEe--cchhhHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYE  336 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l--~~~~~~~  336 (474)
                      .++|+|+||+|  -||+++|+.|.++ |.+|..  |+.++.+
T Consensus       315 ~~~VLVTGatG--~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~  354 (660)
T 1z7e_A          315 RTRVLILGVNG--FIGNHLTERLLREDHYEVYGLDIGSDAIS  354 (660)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHHHSSSEEEEEEESCCTTTG
T ss_pred             CceEEEEcCCc--HHHHHHHHHHHhcCCCEEEEEEcCchhhh
Confidence            35799999999  9999999999987 888887  6665543

>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A

Probab=86.59  E-value=2.3  Score=42.63  Aligned_cols=162  Identities=18%  Similarity=0.220  Sum_probs=98.3

Q ss_pred             HHHcCCcEEEeccc----cccccc-------cccCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 011973          241 ADAKGVKVISLGLL----NQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  291 (474)
Q Consensus       241 A~k~G~kV~~LG~l----n~~e~l-------n~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvvl  291 (474)
                      +.++|.+++.|+.=    .++|.+       ....-+.+.|+|.         ..+++|+.|-+         +=..++.
T Consensus        68 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~  147 (315)
T 1pvv_A           68 MAHLGGHALYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYDHKDVEDLAKYATVPVINGLSDFSHPCQALADYMTIW  147 (315)
T ss_dssp             HHHTTSEEEEEEGGGSTTTTTCCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEECCccccCCCCcCHHHHHHHHHHhCcEEEEecCchHHHHHHHHhCCCCEEcCCCCCCCcHHHHHHHHHHH
Confidence            45799999999753    335543       4556778888886         34577776543         1134454


Q ss_pred             hcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhH------HHHHhhCccccccceeeec-ccc-c-Cce
Q 011973          292 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY------EKLKLRIPVEAQHNLVLST-SYA-A-HKT  361 (474)
Q Consensus       292 ~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~------~~l~~~~~~~~~~~l~~~t-~~~-~-~~~  361 (474)
                      +.... +..+|+++|..+  -+++..+.+|++-|.++.+-.++.|      .+..++...+.+.. +..+ +.+ + +++
T Consensus       148 e~~g~l~gl~va~vGD~~--rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~-~~~~~d~~eav~~a  224 (315)
T 1pvv_A          148 EKKGTIKGVKVVYVGDGN--NVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGS-FELLHDPVKAVKDA  224 (315)
T ss_dssp             HHHSCCTTCEEEEESCCC--HHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCE-EEEESCHHHHTTTC
T ss_pred             HHhCCcCCcEEEEECCCc--chHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCe-EEEEeCHHHHhCCC
Confidence            44332 456899999975  8999999999999999999333322      11112222223333 3334 444 4 889


Q ss_pred             eEEEEcCcCChhhhhcCCCC-ceeecccccCcc---CCCCCee-eecCCc
Q 011973          362 KIWLVGDDLTGKEQARAPKG-TIFIPYTQIPPR---KLRKDCF-YHSTPA  406 (474)
Q Consensus       362 ~vwivg~~i~~~eq~~a~~G-~~f~~~~~v~p~---~~R~dc~-y~~~~a  406 (474)
                      +|+..+-|.+..++...+.- -.|-+| |++++   ..++|+. .|.+|+
T Consensus       225 Dvvy~~~w~smg~~~~~~~~~~~~~~y-~v~~ell~~a~~~ai~mH~lP~  273 (315)
T 1pvv_A          225 DVIYTDVWASMGQEAEAEERRKIFRPF-QVNKDLVKHAKPDYMFMHCLPA  273 (315)
T ss_dssp             SEEEECCCCCSSTTSSSSHHHHHHGGG-CBCHHHHHTSCTTCEEEECSCC
T ss_pred             CEEEEcceeccCcccchHHHHHHHHhc-CCCHHHHhhcCCCcEEECCCCC
Confidence            99888777654432111110 123344 48877   5567876 788886

>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}

Probab=86.45  E-value=1.1  Score=46.78  Aligned_cols=82  Identities=12%  Similarity=0.136  Sum_probs=56.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEE--------E
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--------V  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--------v  366 (474)
                      ..++|-++|- |  .||+++|+.|...|.+|+..+..      .+...+   ......++++  +.+++++        .
T Consensus       155 ~gktvGIIGl-G--~IG~~vA~~l~~~G~~V~~yd~~------~~~~~~---~~~~~~sl~ell~~aDvV~lhvPlt~~T  222 (416)
T 3k5p_A          155 RGKTLGIVGY-G--NIGSQVGNLAESLGMTVRYYDTS------DKLQYG---NVKPAASLDELLKTSDVVSLHVPSSKST  222 (416)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECTT------CCCCBT---TBEECSSHHHHHHHCSEEEECCCC----
T ss_pred             CCCEEEEEee-C--HHHHHHHHHHHHCCCEEEEECCc------chhccc---CcEecCCHHHHHhhCCEEEEeCCCCHHH
Confidence            3568999995 5  99999999999999999983322      111111   1122335543  5666655        2


Q ss_pred             cCcCChhhhhcCCCCceeeccccc
Q 011973          367 GDDLTGKEQARAPKGTIFIPYTQI  390 (474)
Q Consensus       367 g~~i~~~eq~~a~~G~~f~~~~~v  390 (474)
                      -..++.+.+..|++|++++.++|-
T Consensus       223 ~~li~~~~l~~mk~gailIN~aRG  246 (416)
T 3k5p_A          223 SKLITEAKLRKMKKGAFLINNARG  246 (416)
T ss_dssp             -CCBCHHHHHHSCTTEEEEECSCT
T ss_pred             hhhcCHHHHhhCCCCcEEEECCCC
Confidence            245778888999999999999993

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=86.44  E-value=0.51  Score=45.49  Aligned_cols=29  Identities=7%  Similarity=0.225  Sum_probs=26.9

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhcc--CcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQM--GIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~--~v~v~l  329 (474)
                      ++|+|+|++|  -||+++++.|.++  |.+|..
T Consensus         5 ~~vlVTGatG--~iG~~l~~~L~~~~~g~~V~~   35 (348)
T 1oc2_A            5 KNIIVTGGAG--FIGSNFVHYVYNNHPDVHVTV   35 (348)
T ss_dssp             SEEEEETTTS--HHHHHHHHHHHHHCTTCEEEE
T ss_pred             cEEEEeCCcc--HHHHHHHHHHHHhCCCCEEEE
Confidence            5799999999  9999999999988  888887

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=86.39  E-value=0.71  Score=48.82  Aligned_cols=90  Identities=14%  Similarity=0.135  Sum_probs=59.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh-hCccccccceeeeccccc--Cc---eeEEE--Ec
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL-RIPVEAQHNLVLSTSYAA--HK---TKIWL--VG  367 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~-~~~~~~~~~l~~~t~~~~--~~---~~vwi--vg  367 (474)
                      .++|.++|.-   .+|+++|+.|++.|.+|.+  |++++.+++++ +.+ +  ..+...++.++  +.   ++++|  |-
T Consensus        10 ~~~IgvIGlG---~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~-~--~gi~~~~s~~e~v~~l~~aDvVil~Vp   83 (497)
T 2p4q_A           10 SADFGLIGLA---VMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAK-G--KSIIGATSIEDFISKLKRPRKVMLLVK   83 (497)
T ss_dssp             CCSEEEECCS---HHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTT-T--SSEECCSSHHHHHHTSCSSCEEEECCC
T ss_pred             CCCEEEEeeH---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHccccc-C--CCeEEeCCHHHHHhcCCCCCEEEEEcC
Confidence            4578999976   9999999999999999999  89999999987 433 1  12222224432  33   76655  21


Q ss_pred             C--cCCh--hhh-hcCCCCceeecccccCcc
Q 011973          368 D--DLTG--KEQ-ARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       368 ~--~i~~--~eq-~~a~~G~~f~~~~~v~p~  393 (474)
                      +  .++.  +++ ..+++|.++++.+-..+.
T Consensus        84 ~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~  114 (497)
T 2p4q_A           84 AGAPVDALINQIVPLLEKGDIIIDGGNSHFP  114 (497)
T ss_dssp             SSHHHHHHHHHHGGGCCTTCEEEECSCCCHH
T ss_pred             ChHHHHHHHHHHHHhCCCCCEEEECCCCChh
Confidence            1  1111  112 246789999999886664

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=86.34  E-value=0.59  Score=48.68  Aligned_cols=42  Identities=26%  Similarity=0.299  Sum_probs=36.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ++|+|+| +|  -||+++|+.|++.|.+|.+  |+.++.+++.++++
T Consensus         4 k~VlViG-aG--~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~   47 (450)
T 1ff9_A            4 KSVLMLG-SG--FVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ   47 (450)
T ss_dssp             CEEEEEC-CS--TTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCT
T ss_pred             CEEEEEC-CC--HHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcC
Confidence            5799999 57  8999999999999999888  88888888876654

>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}

Probab=86.29  E-value=1.8  Score=45.50  Aligned_cols=96  Identities=16%  Similarity=0.144  Sum_probs=57.3

Q ss_pred             cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhH--------HHHHhh--Cccc----cccceeeeccccc
Q 011973          295 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY--------EKLKLR--IPVE----AQHNLVLSTSYAA  358 (474)
Q Consensus       295 p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~--------~~l~~~--~~~~----~~~~l~~~t~~~~  358 (474)
                      |..-++|.|+|+-   .+|+.+|..|++.|.+|++  +++++-        +++.++  +..+    .-.++...+++++
T Consensus        51 ~~~i~kVaVIGaG---~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~a  127 (460)
T 3k6j_A           51 AYDVNSVAIIGGG---TMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFHK  127 (460)
T ss_dssp             CCCCCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGGG
T ss_pred             cccCCEEEEECCC---HHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHHH
Confidence            3455789999995   9999999999999999999  666632        222222  1111    0012222335555


Q ss_pred             -CceeEEE--EcCcCChh-----hh-hcCCCCceeeccc-ccCcc
Q 011973          359 -HKTKIWL--VGDDLTGK-----EQ-ARAPKGTIFIPYT-QIPPR  393 (474)
Q Consensus       359 -~~~~vwi--vg~~i~~~-----eq-~~a~~G~~f~~~~-~v~p~  393 (474)
                       ++++++|  |-+.++-+     ++ ..+++|++++.-+ -+|+.
T Consensus       128 l~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~  172 (460)
T 3k6j_A          128 LSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLN  172 (460)
T ss_dssp             CTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH
T ss_pred             HccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHH
Confidence             7887766  32222111     11 2478999997643 36654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=86.25  E-value=0.52  Score=50.91  Aligned_cols=45  Identities=13%  Similarity=0.179  Sum_probs=36.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch---------hhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---------DDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~---------~~~~~l~~~~~  343 (474)
                      ..+.|+|+|+++  =||+++|+.|+++|.+|.+  ++.         ++.+++.+++.
T Consensus         7 ~gkvalVTGas~--GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~   62 (604)
T 2et6_A            7 KDKVVIITGAGG--GLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIV   62 (604)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHH
Confidence            346789999997  9999999999999999998  443         66777776654

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=86.07  E-value=1.2  Score=44.00  Aligned_cols=82  Identities=13%  Similarity=0.118  Sum_probs=55.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc------
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------  367 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg------  367 (474)
                      .++|.++|. |  .||+++|+.|...|.+|+.  ++.++- .. .+.+..       ..+.++  +.++++++-      
T Consensus       142 g~~vgIIG~-G--~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~-~~~g~~-------~~~l~ell~~aDvVvl~~P~~~~  209 (313)
T 2ekl_A          142 GKTIGIVGF-G--RIGTKVGIIANAMGMKVLAYDILDIRE-KA-EKINAK-------AVSLEELLKNSDVISLHVTVSKD  209 (313)
T ss_dssp             TCEEEEESC-S--HHHHHHHHHHHHTTCEEEEECSSCCHH-HH-HHTTCE-------ECCHHHHHHHCSEEEECCCCCTT
T ss_pred             CCEEEEEee-C--HHHHHHHHHHHHCCCEEEEECCCcchh-HH-HhcCce-------ecCHHHHHhhCCEEEEeccCChH
Confidence            467999996 5  9999999999999999988  554432 11 222211       113332  556665522      


Q ss_pred             --CcCChhhhhcCCCCceeecccccC
Q 011973          368 --DDLTGKEQARAPKGTIFIPYTQIP  391 (474)
Q Consensus       368 --~~i~~~eq~~a~~G~~f~~~~~v~  391 (474)
                        ..++.+....+++|++++++++-+
T Consensus       210 t~~li~~~~l~~mk~ga~lIn~arg~  235 (313)
T 2ekl_A          210 AKPIIDYPQFELMKDNVIIVNTSRAV  235 (313)
T ss_dssp             SCCSBCHHHHHHSCTTEEEEESSCGG
T ss_pred             HHHhhCHHHHhcCCCCCEEEECCCCc
Confidence              234566778899999999999833

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=85.98  E-value=0.64  Score=45.80  Aligned_cols=99  Identities=14%  Similarity=0.224  Sum_probs=62.6

Q ss_pred             hhHHHHHHhcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--ccc-
Q 011973          284 SLAAAVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYA-  357 (474)
Q Consensus       284 sltaAvvl~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~~-  357 (474)
                      -+||+.+++...+ +.+.|++.|++|  -||.++++.+...|.+|..  +++++++.+++ ++...   .+..+  ++. 
T Consensus       150 ~~ta~~~~~~~~~~g~~~vli~gg~g--~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-~Ga~~---~~~~~~~~~~~  223 (349)
T 3pi7_A          150 PLTAIAMFDIVKQEGEKAFVMTAGAS--QLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD-IGAAH---VLNEKAPDFEA  223 (349)
T ss_dssp             HHHHHHHHHHHHHHCCSEEEESSTTS--HHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH-HTCSE---EEETTSTTHHH
T ss_pred             HHHHHHHHHHHhhCCCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCCE---EEECCcHHHHH
Confidence            3455555554443 446888889998  9999999999999999988  78888888764 33322   23222  111 


Q ss_pred             c-------CceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 011973          358 A-------HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  388 (474)
Q Consensus       358 ~-------~~~~vwi--vg~~i~~~eq~~a~~G~~f~~~~  388 (474)
                      +       ...++++  +|......-...+.+|-.++.+.
T Consensus       224 ~v~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G  263 (349)
T 3pi7_A          224 TLREVMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYG  263 (349)
T ss_dssp             HHHHHHHHHCCCEEEESSCHHHHHHHHHHSCTTCEEEECC
T ss_pred             HHHHHhcCCCCcEEEECCCChhHHHHHhhhcCCCEEEEEe
Confidence            1       2457766  44333333444566666677665

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=85.87  E-value=2.2  Score=44.75  Aligned_cols=114  Identities=16%  Similarity=0.181  Sum_probs=76.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC-cc-ccc-----------cceeeecccc-c-C
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI-PV-EAQ-----------HNLVLSTSYA-A-H  359 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~-~~-~~~-----------~~l~~~t~~~-~-~  359 (474)
                      +.-+|.++|+-   -+|.++|..|++.|.+|++  +++++.+.|++.. +- +.+           .++...++.+ + +
T Consensus         7 ~~~~I~VIG~G---~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~   83 (478)
T 2y0c_A            7 GSMNLTIIGSG---SVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVA   83 (478)
T ss_dssp             CCCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHH
T ss_pred             CCceEEEECcC---HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhh
Confidence            56689999986   8999999999999999999  8999999998862 11 111           1222333553 3 6


Q ss_pred             ceeEEE--EcCcCC--------h-----hhh-hcCCCCceeecccccCcc----------C-C---C--CCeeeecCCcc
Q 011973          360 KTKIWL--VGDDLT--------G-----KEQ-ARAPKGTIFIPYTQIPPR----------K-L---R--KDCFYHSTPAM  407 (474)
Q Consensus       360 ~~~vwi--vg~~i~--------~-----~eq-~~a~~G~~f~~~~~v~p~----------~-~---R--~dc~y~~~~am  407 (474)
                      +++++|  |+...+        .     ++. ..+++|++++.-|-+||.          + +   +  .|+.+..+|..
T Consensus        84 ~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~~g~~~~~~~v~~~Pe~  163 (478)
T 2y0c_A           84 HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKRGGDQMFSVVSNPEF  163 (478)
T ss_dssp             HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCC
T ss_pred             cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHHhcCCCCCccEEEEEChhh
Confidence            666655  544221        1     111 246889999988878773          1 1   2  46777777776


Q ss_pred             ccCCCC
Q 011973          408 IIPPSL  413 (474)
Q Consensus       408 ~vP~~~  413 (474)
                      .-|+..
T Consensus       164 ~~eG~~  169 (478)
T 2y0c_A          164 LKEGAA  169 (478)
T ss_dssp             CCTTCH
T ss_pred             hcccce
Confidence            667664

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=85.82  E-value=0.58  Score=44.76  Aligned_cols=30  Identities=23%  Similarity=0.309  Sum_probs=27.4

Q ss_pred             CcEEEEeccC--CCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTV--TANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gat--g~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+.|+|+|++  +  -||+++|+.|+++|.+|.+
T Consensus         8 ~k~~lVTGas~~~--GIG~aia~~la~~G~~V~~   39 (297)
T 1d7o_A            8 GKRAFIAGIADDN--GYGWAVAKSLAAAGAEILV   39 (297)
T ss_dssp             TCEEEEECCSSSS--SHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEECCCCCC--ChHHHHHHHHHHCCCeEEE
Confidence            4679999998  5  8999999999999999988

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=85.81  E-value=1.3  Score=45.65  Aligned_cols=84  Identities=8%  Similarity=0.045  Sum_probs=55.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc-----
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG-----  367 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg-----  367 (474)
                      ..++|-++|.-   .||+++|+.|...|.+|+.  ++.++.+..+ +.+..      ...+.++  +.++++++-     
T Consensus       190 ~gktvGIIGlG---~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~-~~G~~------~~~~l~ell~~aDvV~l~~Plt~  259 (393)
T 2nac_A          190 EAMHVGTVAAG---RIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLT------WHATREDMYPVCDVVTLNCPLHP  259 (393)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCE------ECSSHHHHGGGCSEEEECSCCCT
T ss_pred             CCCEEEEEeEC---HHHHHHHHHHHhCCCEEEEEcCCccchhhHh-hcCce------ecCCHHHHHhcCCEEEEecCCch
Confidence            45689999976   9999999999999999988  4433322221 11111      0113332  566665532     


Q ss_pred             ---CcCChhhhhcCCCCceeeccccc
Q 011973          368 ---DDLTGKEQARAPKGTIFIPYTQI  390 (474)
Q Consensus       368 ---~~i~~~eq~~a~~G~~f~~~~~v  390 (474)
                         ..++.+.+..+++|+++|.+++-
T Consensus       260 ~t~~li~~~~l~~mk~gailIN~aRG  285 (393)
T 2nac_A          260 ETEHMINDETLKLFKRGAYIVNTARG  285 (393)
T ss_dssp             TTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             HHHHHhhHHHHhhCCCCCEEEECCCc
Confidence               34556777899999999999993

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=85.74  E-value=0.59  Score=44.49  Aligned_cols=84  Identities=13%  Similarity=0.121  Sum_probs=53.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE--cCcCChh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDDLTGK  373 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv--g~~i~~~  373 (474)
                      .+|.++|+ |  .+|+++|+.|.+.|.+|.+ .++++.+.++++   +    +...++.++  ++++++|+  .+...-+
T Consensus         4 m~i~iiG~-G--~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~---g----~~~~~~~~~~~~~~D~vi~~vp~~~~~~   73 (295)
T 1yb4_A            4 MKLGFIGL-G--IMGSPMAINLARAGHQLHVTTIGPVADELLSL---G----AVNVETARQVTEFADIIFIMVPDTPQVE   73 (295)
T ss_dssp             CEEEECCC-S--TTHHHHHHHHHHTTCEEEECCSSCCCHHHHTT---T----CBCCSSHHHHHHTCSEEEECCSSHHHHH
T ss_pred             CEEEEEcc-C--HHHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---C----CcccCCHHHHHhcCCEEEEECCCHHHHH
Confidence            37999995 5  9999999999999999988 445566777654   1    111223432  56667653  2211111


Q ss_pred             -------hh-hcCCCCceeecccccCc
Q 011973          374 -------EQ-ARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       374 -------eq-~~a~~G~~f~~~~~v~p  392 (474)
                             +. ..+++|+++++.+..+|
T Consensus        74 ~v~~~~~~l~~~l~~~~~vv~~s~~~~  100 (295)
T 1yb4_A           74 DVLFGEHGCAKTSLQGKTIVDMSSISP  100 (295)
T ss_dssp             HHHHSTTSSTTSCCTTEEEEECSCCCH
T ss_pred             HHHhCchhHhhcCCCCCEEEECCCCCH
Confidence                   11 13678999999887654

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=85.60  E-value=0.83  Score=45.19  Aligned_cols=78  Identities=13%  Similarity=0.162  Sum_probs=54.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc------
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------  367 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg------  367 (474)
                      .++|.++|. |  .||+++|+.|...|.+|..  |+.+  +    +   +.    ....++++  +.++++++-      
T Consensus       124 g~~vgIIG~-G--~IG~~~A~~l~~~G~~V~~~dr~~~--~----~---~~----~~~~~l~ell~~aDvV~l~~P~~~~  187 (303)
T 1qp8_A          124 GEKVAVLGL-G--EIGTRVGKILAALGAQVRGFSRTPK--E----G---PW----RFTNSLEEALREARAAVCALPLNKH  187 (303)
T ss_dssp             TCEEEEESC-S--THHHHHHHHHHHTTCEEEEECSSCC--C----S---SS----CCBSCSHHHHTTCSEEEECCCCSTT
T ss_pred             CCEEEEEcc-C--HHHHHHHHHHHHCCCEEEEECCCcc--c----c---Cc----ccCCCHHHHHhhCCEEEEeCcCchH
Confidence            457999996 5  9999999999999999988  3332  1    1   11    11224433  667775522      


Q ss_pred             --CcCChhhhhcCCCCceeecccccC
Q 011973          368 --DDLTGKEQARAPKGTIFIPYTQIP  391 (474)
Q Consensus       368 --~~i~~~eq~~a~~G~~f~~~~~v~  391 (474)
                        ..++.+....+++|++++++++-+
T Consensus       188 t~~~i~~~~l~~mk~gailin~srg~  213 (303)
T 1qp8_A          188 TRGLVKYQHLALMAEDAVFVNVGRAE  213 (303)
T ss_dssp             TTTCBCHHHHTTSCTTCEEEECSCGG
T ss_pred             HHHHhCHHHHhhCCCCCEEEECCCCc
Confidence              245567888999999999999843

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=85.59  E-value=1.1  Score=44.65  Aligned_cols=82  Identities=12%  Similarity=0.108  Sum_probs=54.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------  366 (474)
                      ..++|.++|. |  .||+++|+.|...|.+|+.  ++.++ +..+ +..       +...++++  ++++++++      
T Consensus       145 ~g~~vgIIG~-G--~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g-------~~~~~l~e~l~~aDiVil~vp~~~  212 (333)
T 2d0i_A          145 YGKKVGILGM-G--AIGKAIARRLIPFGVKLYYWSRHRKV-NVEK-ELK-------ARYMDIDELLEKSDIVILALPLTR  212 (333)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHGGGTCEEEEECSSCCH-HHHH-HHT-------EEECCHHHHHHHCSEEEECCCCCT
T ss_pred             CcCEEEEEcc-C--HHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcC-------ceecCHHHHHhhCCEEEEcCCCCh
Confidence            3467999996 5  9999999999999999988  55554 2221 111       11123432  56666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccccC
Q 011973          367 --GDDLTGKEQARAPKGTIFIPYTQIP  391 (474)
Q Consensus       367 --g~~i~~~eq~~a~~G~~f~~~~~v~  391 (474)
                        ...++.+....+++| +++..++-+
T Consensus       213 ~t~~~i~~~~~~~mk~g-ilin~srg~  238 (333)
T 2d0i_A          213 DTYHIINEERVKKLEGK-YLVNIGRGA  238 (333)
T ss_dssp             TTTTSBCHHHHHHTBTC-EEEECSCGG
T ss_pred             HHHHHhCHHHHhhCCCC-EEEECCCCc
Confidence              224555567788999 999999843

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=85.57  E-value=0.91  Score=47.42  Aligned_cols=87  Identities=17%  Similarity=0.140  Sum_probs=58.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--C---ceeEEEE--cC-
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--H---KTKIWLV--GD-  368 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~---~~~vwiv--g~-  368 (474)
                      .+|.++|+ |  .+|+++|+.|++.|.+|.+  |++++.+.++++.+.   ..+...++.++  +   +++++|+  -. 
T Consensus         6 ~~IgvIG~-G--~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~---~gi~~~~s~~e~v~~l~~aDvVilavp~~   79 (474)
T 2iz1_A            6 ANFGVVGM-A--VMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQD---KNLVFTKTLEEFVGSLEKPRRIMLMVQAG   79 (474)
T ss_dssp             BSEEEECC-S--HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTT---SCEEECSSHHHHHHTBCSSCEEEECCCTT
T ss_pred             CcEEEEee-H--HHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcC---CCeEEeCCHHHHHhhccCCCEEEEEccCc
Confidence            46999996 4  9999999999999999988  889999999887541   12222224432  3   3777553  11 


Q ss_pred             -cCCh--hhh-hcCCCCceeecccccC
Q 011973          369 -DLTG--KEQ-ARAPKGTIFIPYTQIP  391 (474)
Q Consensus       369 -~i~~--~eq-~~a~~G~~f~~~~~v~  391 (474)
                       .++.  +++ ..+++|+++++.+...
T Consensus        80 ~~v~~vl~~l~~~l~~g~iiId~s~~~  106 (474)
T 2iz1_A           80 AATDATIKSLLPLLDIGDILIDGGNTH  106 (474)
T ss_dssp             HHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred             hHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence             1111  111 2467899999988644

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=85.46  E-value=1.3  Score=43.47  Aligned_cols=86  Identities=17%  Similarity=0.213  Sum_probs=56.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cc--hhhHHHHHhhCccccccceeeecccc-c-CceeEEE--EcC
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC--KDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VGD  368 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~--~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg~  368 (474)
                      ..+|.++|. |  .+|+++|+.|.+.|. +|++  |+  +++.+.+++.       .+...++.+ . ++++++|  |.+
T Consensus        24 ~~~I~iIG~-G--~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~-------g~~~~~~~~e~~~~aDvVi~~vp~   93 (312)
T 3qsg_A           24 AMKLGFIGF-G--EAASAIASGLRQAGAIDMAAYDAASAESWRPRAEEL-------GVSCKASVAEVAGECDVIFSLVTA   93 (312)
T ss_dssp             -CEEEEECC-S--HHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHT-------TCEECSCHHHHHHHCSEEEECSCT
T ss_pred             CCEEEEECc-c--HHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHC-------CCEEeCCHHHHHhcCCEEEEecCc
Confidence            458999997 5  999999999999999 8988  54  4666666543       111123443 2 5666655  322


Q ss_pred             cCChh---h-hhcCCCCceeecccccCcc
Q 011973          369 DLTGK---E-QARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       369 ~i~~~---e-q~~a~~G~~f~~~~~v~p~  393 (474)
                      ....+   + ...+++|+++++.+.++|.
T Consensus        94 ~~~~~~~~~l~~~l~~~~ivvd~st~~~~  122 (312)
T 3qsg_A           94 QAALEVAQQAGPHLCEGALYADFTSCSPA  122 (312)
T ss_dssp             TTHHHHHHHHGGGCCTTCEEEECCCCCHH
T ss_pred             hhHHHHHHhhHhhcCCCCEEEEcCCCCHH
Confidence            22111   1 2346799999999988876

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=85.40  E-value=1.1  Score=44.56  Aligned_cols=39  Identities=10%  Similarity=0.168  Sum_probs=30.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCc-------EEEe--cc----hhhHHH
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGI-------KVAT--IC----KDDYEK  337 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v-------~v~l--~~----~~~~~~  337 (474)
                      ...+|+++||+|  .||+.++..|..+|.       .+.+  ++    +++.+.
T Consensus         4 ~~~KI~ViGaaG--~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g   55 (329)
T 1b8p_A            4 TPMRVAVTGAAG--QICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQG   55 (329)
T ss_dssp             CCEEEEESSTTS--HHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHH
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchh
Confidence            345899999999  999999999998885       6666  55    444554

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=85.37  E-value=0.82  Score=44.23  Aligned_cols=40  Identities=23%  Similarity=0.198  Sum_probs=34.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      -++|.++|+ |  .+|+++|..|++.|.+|++  +++++.++.++
T Consensus        15 ~~~I~VIG~-G--~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~   56 (302)
T 1f0y_A           15 VKHVTVIGG-G--LMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   56 (302)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            367999999 5  9999999999999999999  88888776543

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=85.35  E-value=0.62  Score=43.84  Aligned_cols=27  Identities=22%  Similarity=0.209  Sum_probs=25.4

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +|+|+|++|  -||+++++.|. +|.+|..
T Consensus         2 ~ilVtGatG--~iG~~l~~~L~-~g~~V~~   28 (299)
T 1n2s_A            2 NILLFGKTG--QVGWELQRSLA-PVGNLIA   28 (299)
T ss_dssp             EEEEECTTS--HHHHHHHHHTT-TTSEEEE
T ss_pred             eEEEECCCC--HHHHHHHHHhh-cCCeEEE
Confidence            699999999  99999999999 8999987

>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1

Probab=85.29  E-value=12  Score=37.48  Aligned_cols=157  Identities=16%  Similarity=0.259  Sum_probs=95.7

Q ss_pred             HHHcCCcEEEeccc-----ccccc-------ccccCceeeecCCC---------CcceeeecCCh----------hHHHH
Q 011973          241 ADAKGVKVISLGLL-----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS----------LAAAV  289 (474)
Q Consensus       241 A~k~G~kV~~LG~l-----n~~e~-------ln~~g~l~v~k~p~---------~L~irvv~Gns----------ltaAv  289 (474)
                      +.++|.+++.|+.=     .++|.       |....-+.+.|+|.         ..+++|+.|-+          +=..+
T Consensus        66 ~~~LGg~~i~l~~~~~s~~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~vPVINag~g~~~HPtQ~LaDl~T  145 (308)
T 1ml4_A           66 MHRLGGAVIGFAEASTSSVKKGESLRDTIKTVEQYCDVIVIRHPKEGAARLAAEVAEVPVINAGDGSNQHPTQTLLDLYT  145 (308)
T ss_dssp             HHHTTCEEEEESCGGGSGGGGTCCHHHHHHHHTTTCSEEEEEESSTTHHHHHHHTCSSCEEEEEETTSCCHHHHHHHHHH
T ss_pred             HHHhCCeEEEeCCCccccccCCCCHHHHHHHHHHhCcEEEEecCChhHHHHHHHhCCCCEEeCccCCccCcHHHHHHHHH
Confidence            45799999999643     33444       46667778888876         35688887432          22456


Q ss_pred             HHhcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHH---HHHhhCccccccceeeec-ccc-c-Ccee
Q 011973          290 VVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYA-A-HKTK  362 (474)
Q Consensus       290 vl~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~---~l~~~~~~~~~~~l~~~t-~~~-~-~~~~  362 (474)
                      +.+.... +..+|+++|...-|-+++..+.+|++-|.+|.+-.++.|+   .+.+.+. +.+.. +..+ +.+ + ++++
T Consensus       146 i~e~~g~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~-~~g~~-~~~~~d~~eav~~aD  223 (308)
T 1ml4_A          146 IKKEFGRIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELR-EKGMK-VVETTTLEDVIGKLD  223 (308)
T ss_dssp             HHHHSSCSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHH-HTTCC-EEEESCTHHHHTTCS
T ss_pred             HHHHhCCCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHH-HcCCe-EEEEcCHHHHhcCCC
Confidence            6665433 4468999998621279999999999999999994444331   1222211 22333 3233 444 4 8888


Q ss_pred             EEEEcCcCCh-----hhhhcCCCCceeecccccCcc---CCCCCee-eecCC
Q 011973          363 IWLVGDDLTG-----KEQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTP  405 (474)
Q Consensus       363 vwivg~~i~~-----~eq~~a~~G~~f~~~~~v~p~---~~R~dc~-y~~~~  405 (474)
                      |+..+-|-++     +|..+...+     | |++++   ..++|+. .|.+|
T Consensus       224 vvyt~~~q~er~~~~~~~~~~~~~-----y-~v~~~ll~~a~~~ai~mH~lP  269 (308)
T 1ml4_A          224 VLYVTRIQKERFPDEQEYLKVKGS-----Y-QVNLKVLEKAKDELRIMHPLP  269 (308)
T ss_dssp             EEEECCCCGGGSSSHHHHHTTTTC-----C-CBCTTGGGGSCTTCEEECCSC
T ss_pred             EEEECCccccccCCHHHHHHHhcC-----c-ccCHHHHhhcCCCCEEECCCC
Confidence            8887655332     333332222     3 47777   3457885 66666

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=85.28  E-value=0.5  Score=45.52  Aligned_cols=34  Identities=18%  Similarity=0.292  Sum_probs=28.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccC-------cEEEe--cchh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMG-------IKVAT--ICKD  333 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~-------v~v~l--~~~~  333 (474)
                      ...|+|+|++|  -||+++|+.|.++|       .+|.+  |+.+
T Consensus        14 ~~~vlVtGa~G--~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~   56 (342)
T 2hrz_A           14 GMHIAIIGAAG--MVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQP   56 (342)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHHHHCEETTEEEEEEEEEESSCC
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHhcCCcccCCCceEEEEEccCC
Confidence            35799999999  99999999999999       67776  5443

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=85.26  E-value=1.9  Score=43.32  Aligned_cols=84  Identities=14%  Similarity=0.103  Sum_probs=56.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc-----
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG-----  367 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg-----  367 (474)
                      ..++|.++|- |  .||+++|+.|...|.+|+.  ++.++ +.. .+.+.+       ..+.++  +.++++++-     
T Consensus       164 ~g~tvgIIGl-G--~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~-~~~g~~-------~~~l~ell~~aDvV~l~~P~t~  231 (335)
T 2g76_A          164 NGKTLGILGL-G--RIGREVATRMQSFGMKTIGYDPIISP-EVS-ASFGVQ-------QLPLEEIWPLCDFITVHTPLLP  231 (335)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHTTTCEEEEECSSSCH-HHH-HHTTCE-------ECCHHHHGGGCSEEEECCCCCT
T ss_pred             CcCEEEEEeE-C--HHHHHHHHHHHHCCCEEEEECCCcch-hhh-hhcCce-------eCCHHHHHhcCCEEEEecCCCH
Confidence            4568999996 5  9999999999999999988  44433 221 122211       113332  566665532     


Q ss_pred             ---CcCChhhhhcCCCCceeecccccCc
Q 011973          368 ---DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       368 ---~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                         ..++.+.+..+++|++++++++-+.
T Consensus       232 ~t~~li~~~~l~~mk~gailIN~arg~v  259 (335)
T 2g76_A          232 STTGLLNDNTFAQCKKGVRVVNCARGGI  259 (335)
T ss_dssp             TTTTSBCHHHHTTSCTTEEEEECSCTTS
T ss_pred             HHHHhhCHHHHhhCCCCcEEEECCCccc
Confidence               2455678889999999999999443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	474
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.82
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.67
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.06
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.03
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.95
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.92
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	96.85
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.79
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.77
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.71
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	96.68
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.63
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.6
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.59
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.58
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.57
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.56
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.56
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.56
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.52
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.51
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.51
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.49
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.47
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	96.47
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.46
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.45
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.45
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.42
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	96.4
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.4
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	96.39
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.39
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.35
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.32
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.32
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.31
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.29
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.27
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.24
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	96.23
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.22
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	96.2
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.15
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.13
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.12
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	95.97
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	95.86
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	95.8
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	95.76
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.69
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	95.65
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	95.63
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	95.5
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	95.47
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.46
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	95.43
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.42
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.41
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.36
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	95.34
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	95.26
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	95.24
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	95.22
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.16
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	95.09
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	95.08
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.07
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	94.97
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	94.96
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	94.95
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	94.88
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	94.8
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	94.8
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	94.75
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	94.74
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	94.66
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	94.55
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	94.55
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	94.43
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	94.32
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	94.2
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.14
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	94.08
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	94.06
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	93.89
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	93.88
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	93.84
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	93.69
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	93.64
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	93.62
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	93.62
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	93.62
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	93.47
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	93.42
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	93.38
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	93.29
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	93.24
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	93.21
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	93.07
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	92.96
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	92.95
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	92.93
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	92.92
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	92.9
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	92.8
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	92.77
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	92.74
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	92.73
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	92.71
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	92.64
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	92.63
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	92.52
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	92.5
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	92.44
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	92.3
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	92.15
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	92.14
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	92.01
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	91.92
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	91.88
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	91.75
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.67
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	91.53
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	91.46
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	91.45
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	91.4
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	91.14
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	90.98
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	90.93
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	90.92
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	90.56
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	90.56
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	90.35
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	90.19
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	90.18
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	90.1
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	90.08
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	90.07
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	89.97
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	89.95
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	89.9
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	89.8
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	89.75
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	89.72
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	89.22
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	88.97
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	88.82
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	88.75
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	88.6
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	88.39
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	88.37
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	88.33
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	88.05
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	87.86
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	87.63
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	87.37
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	87.32
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	87.24
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	87.22
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	87.02
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	86.97
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	86.9
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	86.85
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	86.58
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	86.21
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	86.19
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	84.97
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	84.59
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	84.16
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	83.68
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	83.63
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	83.28
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	83.19
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	82.92
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	82.81
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	82.72
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	81.6
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	81.11
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	81.04
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	80.83
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	80.29

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.82  E-value=1.6e-05  Score=71.21  Aligned_cols=94  Identities=14%  Similarity=0.080  Sum_probs=69.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccccee--eecccc---c--CceeEEE--
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV--LSTSYA---A--HKTKIWL--  365 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~--~~t~~~---~--~~~~vwi--  365 (474)
                      ..+.|+++|++|  -||+++|+.|.++|-+|.+  |+.++++++.+++.........  .+++.+   +  .+++++|  
T Consensus        22 ~gK~vlItGasg--GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~   99 (191)
T d1luaa1          22 KGKKAVVLAGTG--PVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA   99 (191)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCEEEEECCCH--HHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeec
Confidence            578999999998  9999999999999999999  9999999999997765554433  233222   2  6778887  


Q ss_pred             Ec---CcCChhhhhcCCCCceeecccccCc
Q 011973          366 VG---DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       366 vg---~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                      +|   ..+++++.+....--++.++.-+++
T Consensus       100 Ag~g~~~~~~e~~~~~~~~nv~~~~~~~~~  129 (191)
T d1luaa1         100 GAIGLELLPQAAWQNESSIEIVADYNAQPP  129 (191)
T ss_dssp             CCTTCCCBCHHHHHTCTTCCEEEECCCSSS
T ss_pred             CccccccCCHHHHHhhhcceeehhHhhHHH
Confidence            23   3456677666666655666654444

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.67  E-value=2.7e-05  Score=68.63  Aligned_cols=89  Identities=18%  Similarity=0.192  Sum_probs=65.1

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEcC---
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGD---  368 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg~---  368 (474)
                      ..++|+++|+ |  .+|+.+|++|..+|. ++++  |+.++-++|.++++...    ....++. . ..+|++|...   
T Consensus        23 ~~~~ilviGa-G--~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~----~~~~~~~~~l~~~Divi~atss~   95 (159)
T d1gpja2          23 HDKTVLVVGA-G--EMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA----VRFDELVDHLARSDVVVSATAAP   95 (159)
T ss_dssp             TTCEEEEESC-C--HHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE----CCGGGHHHHHHTCSEEEECCSSS
T ss_pred             ccCeEEEECC-C--HHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc----ccchhHHHHhccCCEEEEecCCC
Confidence            6889999999 7  999999999999998 5777  88899999998865332    2112222 2 5778877332   


Q ss_pred             --cCChhhhhcC------CCCceeecccccCcc
Q 011973          369 --DLTGKEQARA------PKGTIFIPYTQIPPR  393 (474)
Q Consensus       369 --~i~~~eq~~a------~~G~~f~~~~~v~p~  393 (474)
                        .++.++.+.+      .++.+|+|.+ +|+.
T Consensus        96 ~~ii~~~~i~~~~~~r~~~~~~~iiDla-vPr~  127 (159)
T d1gpja2          96 HPVIHVDDVREALRKRDRRSPILIIDIA-NPRD  127 (159)
T ss_dssp             SCCBCHHHHHHHHHHCSSCCCEEEEECC-SSCS
T ss_pred             CccccHhhhHHHHHhcccCCCeEEEeec-CCCC
Confidence              4777776533      3567999998 7765

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.06  E-value=0.00041  Score=62.09  Aligned_cols=90  Identities=13%  Similarity=0.179  Sum_probs=72.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--ccc-c-CceeEEE------
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYA-A-HKTKIWL------  365 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~~-~-~~~~vwi------  365 (474)
                      -++|++.|+-   -.|..-++...+.|-+|..  .+.++++++++..+....  .+.++  .++ + +++|++|      
T Consensus        32 pa~V~ViGaG---vaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~--~~~~~~~~l~~~~~~aDivI~aalip  106 (168)
T d1pjca1          32 PGKVVILGGG---VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVE--LLYSNSAEIETAVAEADLLIGAVLVP  106 (168)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSE--EEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             CcEEEEECCC---hHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccce--eehhhhhhHHHhhccCcEEEEeeecC
Confidence            6899999998   8999999999999999999  888999999888554331  12222  222 2 7888877      


Q ss_pred             ---EcCcCChhhhhcCCCCceeecccccCcc
Q 011973          366 ---VGDDLTGKEQARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       366 ---vg~~i~~~eq~~a~~G~~f~~~~~v~p~  393 (474)
                         .-+.|+.+..++|+||++.+|++ ++.-
T Consensus       107 G~~aP~lIt~~mv~~Mk~GSVIVDva-idqG  136 (168)
T d1pjca1         107 GRRAPILVPASLVEQMRTGSVIVDVA-VDQG  136 (168)
T ss_dssp             TSSCCCCBCHHHHTTSCTTCEEEETT-CTTC
T ss_pred             CcccCeeecHHHHhhcCCCcEEEEee-cCCC
Confidence               56789999999999999999999 6654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.03  E-value=0.00024  Score=59.78  Aligned_cols=48  Identities=17%  Similarity=0.169  Sum_probs=41.7

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccc
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHN  349 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~  349 (474)
                      +|.++|.+|  .+|+++|+.|++.|.+|++  |++++++++.+++.......
T Consensus         2 ki~vigGaG--~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~   51 (212)
T d1jaya_           2 RVALLGGTG--NLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDA   51 (212)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSC
T ss_pred             EEEEEeCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCc
Confidence            588998888  8999999999999999999  99999999999976554333

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.95  E-value=0.00044  Score=58.53  Aligned_cols=46  Identities=26%  Similarity=0.301  Sum_probs=41.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  346 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~  346 (474)
                      +++|+++|| |  .+|+.+|+.|+++|.+|++  |++++.++++++++...
T Consensus         2 ~K~IliiGa-G--~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~   49 (182)
T d1e5qa1           2 TKSVLMLGS-G--FVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHST   49 (182)
T ss_dssp             CCEEEEECC-S--TTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEE
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccc
Confidence            578999998 7  9999999999999999999  99999999999866533

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.00061  Score=63.42  Aligned_cols=47  Identities=26%  Similarity=0.299  Sum_probs=42.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  345 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~  345 (474)
                      +.+.|+++|+++  -||+++|+.|+++|.+|.+  |++++++++++++...
T Consensus         9 k~Kv~lITGas~--GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~   57 (257)
T d1xg5a_           9 RDRLALVTGASG--GIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA   57 (257)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            357899999997  9999999999999999999  9999999999886654

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=96.85  E-value=0.00061  Score=63.51  Aligned_cols=46  Identities=15%  Similarity=0.198  Sum_probs=41.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  345 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~  345 (474)
                      -+.|+++|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++...
T Consensus         6 gK~alITGas~--GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~   53 (258)
T d1ae1a_           6 GTTALVTGGSK--GIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK   53 (258)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            57899999997  9999999999999999999  9999999998886543

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.79  E-value=0.00083  Score=62.81  Aligned_cols=46  Identities=17%  Similarity=0.257  Sum_probs=41.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.++|+|+++  -||+|+|+.|+++|.+|.+  |++++++++++++.+
T Consensus         4 ~gK~alVTGas~--GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~   51 (272)
T d1xkqa_           4 SNKTVIITGSSN--GIGRTTAILFAQEGANVTITGRSSERLEETRQIILK   51 (272)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCcCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            456889999997  9999999999999999999  999999999988644

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.77  E-value=0.0009  Score=62.00  Aligned_cols=46  Identities=13%  Similarity=0.128  Sum_probs=41.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +.+.++++|+++  -||+++|+.|++.|.+|.+  |++++++++.+++..
T Consensus         9 enKvalITGas~--GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~   56 (251)
T d2c07a1           9 ENKVALVTGAGR--GIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS   56 (251)
T ss_dssp             SSCEEEEESTTS--HHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh
Confidence            457788899997  9999999999999999999  999999999988754

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.71  E-value=0.0029  Score=55.08  Aligned_cols=67  Identities=16%  Similarity=0.171  Sum_probs=50.3

Q ss_pred             cCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc--c-CceeEEE
Q 011973          293 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA--A-HKTKIWL  365 (474)
Q Consensus       293 ~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~--~-~~~~vwi  365 (474)
                      .+....++|++.||-|   .|+|++.+|.+.|.++.+  |+.++.++|.+.+.....   +...++.  . ..++++|
T Consensus        13 ~~~~~~k~vlIlGaGG---aarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~---~~~~~~~~~~~~~~dliI   84 (170)
T d1nyta1          13 SFIRPGLRILLIGAGG---ASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGS---IQALSMDELEGHEFDLII   84 (170)
T ss_dssp             TCCCTTCEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSS---EEECCSGGGTTCCCSEEE
T ss_pred             CCCCCCCEEEEECCcH---HHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccc---ccccccccccccccceee
Confidence            3444567999999986   799999999999999888  999999999988765442   2222332  2 5667777

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.00088  Score=61.83  Aligned_cols=46  Identities=20%  Similarity=0.300  Sum_probs=41.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .-+.|+++|+++  -||+|+|+.|+++|.+|.+  |+++++++++++++.
T Consensus         6 ~GK~~lITGas~--GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~   53 (244)
T d1pr9a_           6 AGRRVLVTGAGK--GIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG   53 (244)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCC
Confidence            347899999997  9999999999999999999  999999999998764

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.63  E-value=0.0015  Score=60.83  Aligned_cols=47  Identities=13%  Similarity=0.177  Sum_probs=42.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  346 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~  346 (474)
                      -+.++|+|+++  -||+|+|+.|+++|.+|.+  |++++++++.++++...
T Consensus         5 gK~alVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~   53 (254)
T d1hdca_           5 GKTVIITGGAR--GLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAA   53 (254)
T ss_dssp             CSEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGE
T ss_pred             CCEEEEeCcCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCce
Confidence            46789999997  9999999999999999999  99999999999986543

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.60  E-value=0.0011  Score=61.38  Aligned_cols=47  Identities=13%  Similarity=0.168  Sum_probs=41.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  346 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~  346 (474)
                      .+.++|+|+++  -||+++|+.|+++|.+|.+  |++++++++.+++.++.
T Consensus         5 gK~~lITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~   53 (251)
T d1vl8a_           5 GRVALVTGGSR--GLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY   53 (251)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh
Confidence            46789999997  9999999999999999999  99999998888865543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.59  E-value=0.0012  Score=61.39  Aligned_cols=46  Identities=13%  Similarity=0.200  Sum_probs=41.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  345 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~  345 (474)
                      -+.++|+|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++...
T Consensus         8 GK~alITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~   55 (259)
T d2ae2a_           8 GCTALVTGGSR--GIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK   55 (259)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            46789999997  9999999999999999999  9999999998886543

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.58  E-value=0.0012  Score=61.89  Aligned_cols=45  Identities=20%  Similarity=0.290  Sum_probs=40.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         4 gK~alITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~   50 (274)
T d1xhla_           4 GKSVIITGSSN--GIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILK   50 (274)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
Confidence            46789999997  9999999999999999999  999999999988654

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.57  E-value=0.0012  Score=61.31  Aligned_cols=47  Identities=15%  Similarity=0.205  Sum_probs=42.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  346 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~  346 (474)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++....
T Consensus         6 gK~alITGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~   54 (244)
T d1nffa_           6 GKVALVSGGAR--GMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAA   54 (244)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGE
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcc
Confidence            47889999997  9999999999999999999  99999999999986543

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.56  E-value=0.0008  Score=62.62  Aligned_cols=47  Identities=19%  Similarity=0.268  Sum_probs=41.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  346 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~  346 (474)
                      -+.++++||++  -||+|+|+.|+++|.+|.+  |++++++++++++....
T Consensus        14 GK~alITGass--GIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~   62 (269)
T d1xu9a_          14 GKKVIVTGASK--GIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG   62 (269)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh
Confidence            47899999997  9999999999999999999  99999999988855433

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.56  E-value=0.0011  Score=58.68  Aligned_cols=36  Identities=11%  Similarity=0.133  Sum_probs=32.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  335 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~  335 (474)
                      -++|+|+||||  .||+++++.|.++|.+|+.  |+.+++
T Consensus         3 ~kkIlV~GatG--~iG~~v~~~Ll~~g~~V~~~~R~~~~~   40 (205)
T d1hdoa_           3 VKKIAIFGATG--QTGLTTLAQAVQAGYEVTVLVRDSSRL   40 (205)
T ss_dssp             CCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCGGGS
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCcCEEEEEEcChhhc
Confidence            36899999999  9999999999999999988  777654

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.56  E-value=0.0011  Score=61.50  Aligned_cols=46  Identities=15%  Similarity=0.228  Sum_probs=41.6

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +-+.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++..
T Consensus        10 ~gK~alITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~   57 (255)
T d1fmca_          10 DGKCAIITGAGA--GIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ   57 (255)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
Confidence            457889999997  9999999999999999999  999999999988754

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.52  E-value=0.0015  Score=60.47  Aligned_cols=43  Identities=21%  Similarity=0.227  Sum_probs=38.8

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      -++++|+++  =||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         3 ValITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~   47 (255)
T d1gega_           3 VALVTGAGQ--GIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ   47 (255)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             EEEEcCCcc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            358889997  9999999999999999999  999999999988754

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.51  E-value=0.0015  Score=60.67  Aligned_cols=46  Identities=17%  Similarity=0.265  Sum_probs=41.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      ..+.++|+|+++  -||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         4 ~gKvalVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~   51 (264)
T d1spxa_           4 AEKVAIITGSSN--GIGRATAVLFAREGAKVTITGRHAERLEETRQQILA   51 (264)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            456789999997  9999999999999999999  999999999988643

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.51  E-value=0.00099  Score=61.50  Aligned_cols=46  Identities=17%  Similarity=0.255  Sum_probs=41.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  345 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~  345 (474)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |+++++++++++++.+
T Consensus         4 gK~alITGas~--GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~   51 (243)
T d1q7ba_           4 GKIALVTGASR--GIGRAIAETLAARGAKVIGTATSENGAQAISDYLGAN   51 (243)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC
Confidence            46788999997  9999999999999999999  9999999999987544

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.49  E-value=0.0014  Score=61.10  Aligned_cols=47  Identities=13%  Similarity=0.213  Sum_probs=41.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  345 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~  345 (474)
                      +.+.|+|+|+++  -||+|+|+.|++.|.+|.+  |++++++++.+++...
T Consensus         7 kgK~alVTGas~--GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~   55 (259)
T d1xq1a_           7 KAKTVLVTGGTK--GIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK   55 (259)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            457899999997  9999999999999999999  9999999998886543

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.47  E-value=0.0012  Score=61.13  Aligned_cols=47  Identities=15%  Similarity=0.210  Sum_probs=41.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  346 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~  346 (474)
                      .+.|+|+|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++.++.
T Consensus         9 gK~alITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~   57 (260)
T d1h5qa_           9 NKTIIVTGGNR--GIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF   57 (260)
T ss_dssp             TEEEEEETTTS--HHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh
Confidence            57889999997  9999999999999999999  89999988888765543

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.47  E-value=0.0014  Score=60.88  Aligned_cols=48  Identities=23%  Similarity=0.198  Sum_probs=42.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  346 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~  346 (474)
                      +-+.|+++|+++  -||+|+|+.|+++|.+|.+  |+++++++++++++.+.
T Consensus         5 ~gK~alITGas~--GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~   54 (253)
T d1hxha_           5 QGKVALVTGGAS--GVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERS   54 (253)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTE
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCe
Confidence            346789999997  9999999999999999999  99999999999976543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.46  E-value=0.0018  Score=60.19  Aligned_cols=46  Identities=20%  Similarity=0.254  Sum_probs=41.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +-+.|+++|+++  -||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         4 ~gK~alITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~   51 (260)
T d1zema1           4 NGKVCLVTGAGG--NIGLATALRLAEEGTAIALLDMNREALEKAEASVRE   51 (260)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            356889999997  9999999999999999998  999999999988654

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.0021  Score=59.30  Aligned_cols=45  Identities=22%  Similarity=0.176  Sum_probs=40.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      -+.|+++|+++  -||+|+|+.|+++|.+|.+  |++++++++++++.+
T Consensus         3 GKvalITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~   49 (254)
T d2gdza1           3 GKVALVTGAAQ--GIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHE   49 (254)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
Confidence            36789999997  9999999999999999999  999999998888644

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.0017  Score=60.11  Aligned_cols=44  Identities=18%  Similarity=0.206  Sum_probs=40.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +.++++|+++  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         8 kv~lITGas~--GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~   53 (244)
T d1yb1a_           8 EIVLITGAGH--GIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG   53 (244)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            5788889997  9999999999999999999  999999999999654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.42  E-value=0.0012  Score=61.72  Aligned_cols=47  Identities=13%  Similarity=0.162  Sum_probs=41.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  346 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~  346 (474)
                      -+.|+++|+++  -||+|+|+.|++.|.+|.+  |++++++++.+++..+.
T Consensus        25 gK~alITGas~--GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~   73 (294)
T d1w6ua_          25 GKVAFITGGGT--GLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT   73 (294)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc
Confidence            47899999997  9999999999999999999  99999998888765543

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.40  E-value=0.0017  Score=59.85  Aligned_cols=45  Identities=20%  Similarity=0.242  Sum_probs=41.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |+++++++++++++.
T Consensus         5 GK~alITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~   51 (242)
T d1cyda_           5 GLRALVTGAGK--GIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG   51 (242)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTT
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCC
Confidence            36789999997  8999999999999999999  999999999999764

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.40  E-value=0.0014  Score=61.42  Aligned_cols=46  Identities=20%  Similarity=0.255  Sum_probs=41.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  345 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~  345 (474)
                      -+.|+++|+++  -||+|+|+.|+++|.+|.+  |+++++++++++++.+
T Consensus         5 gK~alITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~   52 (276)
T d1bdba_           5 GEAVLITGGAS--GLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDN   52 (276)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCC
Confidence            47899999997  9999999999999999999  9999999998886543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.0017  Score=60.29  Aligned_cols=46  Identities=13%  Similarity=0.212  Sum_probs=41.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +-+.++++|+++  -||+|+|+.|+++|.+|.+  |+++++++++++++.
T Consensus         5 ~GK~alITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~   52 (250)
T d1ydea1           5 AGKVVVVTGGGR--GIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG   52 (250)
T ss_dssp             TTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCC
Confidence            356799999997  9999999999999999999  999999999999764

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.39  E-value=0.0035  Score=56.98  Aligned_cols=142  Identities=16%  Similarity=0.221  Sum_probs=83.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc---CceeEEE---EcC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA---HKTKIWL---VGD  368 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~---~~~~vwi---vg~  368 (474)
                      +-++|.+.| .|  +||+.+|++|.+.|.+|+.  .++++.+..... ..    ..+   +.++   .+|||.+   .|.
T Consensus        26 ~gk~v~IqG-~G--~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~-g~----~~~---~~~~~~~~~~DI~iPcA~~~   94 (201)
T d1c1da1          26 DGLTVLVQG-LG--AVGGSLASLAAEAGAQLLVADTDTERVAHAVAL-GH----TAV---ALEDVLSTPCDVFAPCAMGG   94 (201)
T ss_dssp             TTCEEEEEC-CS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TC----EEC---CGGGGGGCCCSEEEECSCSC
T ss_pred             CCCEEEEEC-CC--HHHHHHHHHHHHCCCEEEEecchHHHHHHHHhh-cc----ccc---Cccccccccceeeecccccc
Confidence            457899999 55  9999999999999999999  555665554332 11    111   2222   6788887   677


Q ss_pred             cCChhhhhcCCCCceeecccc--cCccCCCCCeeeecCCccccCCCCccccccccccCcchhHHHHHhhhhh----hhcC
Q 011973          369 DLTGKEQARAPKGTIFIPYTQ--IPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH----ALEG  442 (474)
Q Consensus       369 ~i~~~eq~~a~~G~~f~~~~~--v~p~~~R~dc~y~~~~am~vP~~~~~~~~~e~~~prr~~~Ac~a~~~v~----alEg  442 (474)
                      .|+++...+.+-- .++--+.  +.+++  .|=...+.+.+-+|+                 +.+-|+|++.    .+.+
T Consensus        95 ~I~~~~a~~i~ak-~i~e~AN~p~~~~~--~~~~L~~rgI~~iPD-----------------~laNAGGVi~~~~~~~~~  154 (201)
T d1c1da1          95 VITTEVARTLDCS-VVAGAANNVIADEA--ASDILHARGILYAPD-----------------FVANAGGAIHLVGREVLG  154 (201)
T ss_dssp             CBCHHHHHHCCCS-EECCSCTTCBCSHH--HHHHHHHTTCEECCH-----------------HHHTTHHHHHHHHHHTTC
T ss_pred             cccHHHHhhhhhh-eeeccCCCCcchhh--HHHHhcccceEEEeh-----------------hhhccchHHHHHHHHHcC
Confidence            7777777655321 1111111  11110  000011112222333                 2345566553    3468


Q ss_pred             CCCCccch-h---hhhHHHHHHHHHhCCCcc
Q 011973          443 WDLNECGQ-T---MCDIHQVWHASLRHGFRP  469 (474)
Q Consensus       443 w~~~e~G~-i---v~~id~iw~aa~kHGF~p  469 (474)
                      |++.++-. +   .+.+.+|++.|.++|-.|
T Consensus       155 ~~~~~v~~~l~~i~~~~~~i~~~a~~~~~~~  185 (201)
T d1c1da1         155 WSESVVHERAVAIGDTLNQVFEISDNDGVTP  185 (201)
T ss_dssp             CCHHHHHHHHHTHHHHHHHHHHHHHHHTCCH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHCcCH
Confidence            88887544 3   489999999999998433

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.35  E-value=0.0021  Score=59.77  Aligned_cols=45  Identities=22%  Similarity=0.273  Sum_probs=40.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+.++|+|+++  -||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         4 gK~alITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~   50 (258)
T d1iy8a_           4 DRVVLITGGGS--GLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLE   50 (258)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            46889999997  9999999999999999999  999999998887543

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.0021  Score=61.09  Aligned_cols=45  Identities=13%  Similarity=0.208  Sum_probs=40.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      +-+.|+|+|+++  -||+|+|+.|++.|.+|.+  |++++++++.+++.
T Consensus        11 ~gKvalITGas~--GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~   57 (297)
T d1yxma1          11 QGQVAIVTGGAT--GIGKAIVKELLELGSNVVIASRKLERLKSAADELQ   57 (297)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            457899999997  9999999999999999999  99999988877754

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.32  E-value=0.0016  Score=60.40  Aligned_cols=46  Identities=20%  Similarity=0.245  Sum_probs=41.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  345 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~  345 (474)
                      .+.++|+|+++  -||+|+|+.|+++|.+|.+  |++++++++.++++.+
T Consensus         5 gK~alVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~   52 (256)
T d1k2wa_           5 GKTALITGSAR--GIGRAFAEAYVREGARVAIADINLEAARATAAEIGPA   52 (256)
T ss_dssp             TEEEEEETCSS--HHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCc
Confidence            46889999997  9999999999999999999  9999999999997544

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.31  E-value=0.0016  Score=59.58  Aligned_cols=46  Identities=11%  Similarity=0.081  Sum_probs=39.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccC--cEEEe--cchhhHHHHHhhCccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLRIPVE  345 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~--v~v~l--~~~~~~~~l~~~~~~~  345 (474)
                      .+.|+|+||++  =||+++|+.|+++|  ++|.+  |+++++++++++.+.+
T Consensus         3 ~KtilITGass--GIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~   52 (250)
T d1yo6a1           3 PGSVVVTGANR--GIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSR   52 (250)
T ss_dssp             CSEEEESSCSS--HHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCc
Confidence            37899999996  99999999999998  57776  9999999998775543

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.29  E-value=0.0022  Score=58.97  Aligned_cols=46  Identities=11%  Similarity=0.166  Sum_probs=41.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  345 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~  345 (474)
                      -+.|+++|+++  -||+++|+.|+++|.+|.+  |+.++++++.+++..+
T Consensus         5 gK~alItGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~   52 (241)
T d2a4ka1           5 GKTILVTGAAS--GIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE   52 (241)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSS
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCc
Confidence            46789999997  9999999999999999999  9999999999988643

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.27  E-value=0.0027  Score=58.61  Aligned_cols=44  Identities=14%  Similarity=0.204  Sum_probs=39.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +-++++|+++  =||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         3 KValITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~   48 (257)
T d2rhca1           3 EVALVTGATS--GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE   48 (257)
T ss_dssp             CEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            4457889997  9999999999999999999  999999999988754

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.24  E-value=0.002  Score=59.50  Aligned_cols=48  Identities=19%  Similarity=0.181  Sum_probs=42.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  346 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~  346 (474)
                      +.+.++|+|+++  -||+|+|+.|+++|.+|.+  |++++++++++++..+.
T Consensus         5 ~gK~alVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~   54 (251)
T d1zk4a1           5 DGKVAIITGGTL--GIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD   54 (251)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCC
Confidence            357889999997  9999999999999999999  99999999999875543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=96.23  E-value=0.0022  Score=58.45  Aligned_cols=48  Identities=17%  Similarity=0.327  Sum_probs=38.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhH-HHHHhhCccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY-EKLKLRIPVE  345 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~-~~l~~~~~~~  345 (474)
                      -+.|+++||.|++-||+|||+.|+++|.+|.+  |+++++ ++++++++.+
T Consensus         6 gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~   56 (268)
T d2h7ma1           6 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAK   56 (268)
T ss_dssp             TCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSC
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCc
Confidence            46799999876334999999999999999999  777776 5576666543

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.22  E-value=0.0027  Score=58.95  Aligned_cols=48  Identities=19%  Similarity=0.245  Sum_probs=42.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  346 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~  346 (474)
                      +.+.|+++|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++....
T Consensus         5 ~gKvalITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~   54 (268)
T d2bgka1           5 QDKVAIITGGAG--GIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD   54 (268)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC
Confidence            456789999997  9999999999999999999  99999999999976543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.20  E-value=0.0027  Score=58.42  Aligned_cols=46  Identities=13%  Similarity=0.227  Sum_probs=41.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  345 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~  345 (474)
                      .+.|+++|+++  -||+++|+.|+++|.+|.+  |++++++++++++...
T Consensus         5 gK~~lITGas~--GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~   52 (242)
T d1ulsa_           5 DKAVLITGAAH--GIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAH   52 (242)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCE
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCe
Confidence            47899999997  8999999999999999999  9999999999887543

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.15  E-value=0.0024  Score=58.71  Aligned_cols=44  Identities=20%  Similarity=0.335  Sum_probs=37.5

Q ss_pred             cEE-EEeccCCCchhHHHHHHHHhccCcE-------EEe--cchhhHHHHHhhCcc
Q 011973          299 AHV-LLRGTVTANKVANAVASSLCQMGIK-------VAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       299 ~~V-~l~Gatg~~kig~ava~~L~~~~v~-------v~l--~~~~~~~~l~~~~~~  344 (474)
                      |+| +++|+++  =||+|+|+.|+++|.+       |.+  |++++++++++++..
T Consensus         1 K~VvlITGas~--GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~   54 (240)
T d2bd0a1           1 KHILLITGAGK--GIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA   54 (240)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCEEEEccCCC--HHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHh
Confidence            464 6789996  8999999999999987       666  999999999988654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.0021  Score=58.52  Aligned_cols=47  Identities=13%  Similarity=0.118  Sum_probs=41.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  346 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~  346 (474)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++....
T Consensus         5 GKvalITGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~   53 (248)
T d2o23a1           5 GLVAVITGGAS--GLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNC   53 (248)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTE
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCc
Confidence            35678999997  8999999999999999999  99999999998876544

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.12  E-value=0.0023  Score=59.16  Aligned_cols=48  Identities=13%  Similarity=0.291  Sum_probs=40.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCccccc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIPVEAQ  347 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~-~~~~~~l~~~~~~~~~  347 (474)
                      .+.++++|+++  -||+|+|+.|+++|.+|.+  |+ +++++++++++....+
T Consensus         4 gK~alITGas~--GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g   54 (260)
T d1x1ta1           4 GKVAVVTGSTS--GIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG   54 (260)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred             cCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcC
Confidence            35788999997  9999999999999999999  54 6788988888655443

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.97  E-value=0.002  Score=59.29  Aligned_cols=45  Identities=18%  Similarity=0.270  Sum_probs=39.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      -+.|+++|+++  -||+|||+.|+++|.+|.+  |+++++++++++...
T Consensus         6 gK~alITGas~--GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~   52 (245)
T d2ag5a1           6 GKVIILTAAAQ--GIGQAAALAFAREGAKVIATDINESKLQELEKYPGI   52 (245)
T ss_dssp             TCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTE
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCC
Confidence            46789999997  9999999999999999999  999988888776443

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.86  E-value=0.0042  Score=57.54  Aligned_cols=45  Identities=20%  Similarity=0.208  Sum_probs=38.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~  344 (474)
                      -+.|+++|+++  -||+|+|+.|+++|.+|.+   ++++..+++.+++.+
T Consensus        18 gK~~lITGas~--GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~   65 (272)
T d1g0oa_          18 GKVALVTGAGR--GIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK   65 (272)
T ss_dssp             TCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHh
Confidence            47899999997  9999999999999999988   457778888777544

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=95.80  E-value=0.0087  Score=56.40  Aligned_cols=43  Identities=28%  Similarity=0.298  Sum_probs=37.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      .-+.|+|+|++|  =||+.++..|.++|.+|..  |+.++.+.+++.
T Consensus        10 ~gk~VlVTG~sG--fIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~   54 (342)
T d1y1pa1          10 EGSLVLVTGANG--FVASHVVEQLLEHGYKVRGTARSASKLANLQKR   54 (342)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred             CcCEEEEECCCC--HHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHh
Confidence            357999999999  9999999999999999865  888888777654

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.76  E-value=0.0056  Score=56.15  Aligned_cols=45  Identities=20%  Similarity=0.224  Sum_probs=38.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhc---cCcEEEe--cchhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQ---MGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~---~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      .+-++|+|+++  =||+++|+.|+|   +|.+|.+  |++++++++++++..
T Consensus         6 gKvalITGas~--GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~   55 (259)
T d1oaaa_           6 CAVCVLTGASR--GFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGA   55 (259)
T ss_dssp             SEEEEESSCSS--HHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHh
Confidence            34567779996  899999999996   7999999  999999999988654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.69  E-value=0.0027  Score=54.50  Aligned_cols=40  Identities=20%  Similarity=0.167  Sum_probs=31.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcE--EEe--cchhhHHHHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIK--VAT--ICKDDYEKLK  339 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~--v~l--~~~~~~~~l~  339 (474)
                      -++|+|+|+||  -||+++++.|.++|.+  |..  |++++.+.+.
T Consensus         3 ~~tVlVtGatG--~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~   46 (252)
T d2q46a1           3 LPTVLVTGASG--RTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG   46 (252)
T ss_dssp             CCEEEEESTTS--TTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT
T ss_pred             CCEEEEECCcc--HHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc
Confidence            46899999999  9999999999999954  432  7776655544

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.65  E-value=0.0047  Score=56.78  Aligned_cols=42  Identities=26%  Similarity=0.341  Sum_probs=36.8

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcc
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV  344 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~  344 (474)
                      |+++|+++  -||+|+|+.|+++|.+|.+   |++++++++++++..
T Consensus         4 ~lITGas~--GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~   48 (244)
T d1edoa_           4 VVVTGASR--GIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA   48 (244)
T ss_dssp             EEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred             EEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH
Confidence            67889997  9999999999999999987   788889999888643

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=95.63  E-value=0.0066  Score=55.49  Aligned_cols=49  Identities=14%  Similarity=0.277  Sum_probs=40.0

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcccccccee
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLV  351 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~~~~~~l~  351 (474)
                      ++|+|+++  -||+|+|+.|+++|.+|.+   |++++.+++++++........+
T Consensus         5 AlITGas~--GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~   56 (284)
T d1e7wa_           5 ALVTGAAK--RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAI   56 (284)
T ss_dssp             EEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEE
T ss_pred             EEEeCCCC--HHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceE
Confidence            35679996  8999999999999999987   7788899999887665544433

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.50  E-value=0.0056  Score=56.37  Aligned_cols=48  Identities=17%  Similarity=0.198  Sum_probs=40.4

Q ss_pred             cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcc
Q 011973          295 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV  344 (474)
Q Consensus       295 p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~  344 (474)
                      |-.-+.|+++|+++  -||+|+|+.|+++|.+|.+   ++++..+++++++..
T Consensus         3 ~L~GK~alITGas~--GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~   53 (259)
T d1ja9a_           3 PLAGKVALTTGAGR--GIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK   53 (259)
T ss_dssp             TTTTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHH
Confidence            34557899999997  9999999999999999987   677778888888654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=95.47  E-value=0.0076  Score=56.66  Aligned_cols=37  Identities=8%  Similarity=0.151  Sum_probs=32.3

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      +.+++|+|+|+||  -||+++|+.|.++|.+|..  |+.+.
T Consensus         1 ~~kktIlVtGatG--~iG~~lv~~Ll~~G~~V~~l~R~~~~   39 (350)
T d1xgka_           1 QQKKTIAVVGATG--RQGASLIRVAAAVGHHVRAQVHSLKG   39 (350)
T ss_dssp             CCCCCEEEESTTS--HHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred             CCCCEEEEECCCh--HHHHHHHHHHHhCCCeEEEEECCcch
Confidence            3578999999999  9999999999999999877  76553

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.46  E-value=0.0077  Score=55.89  Aligned_cols=139  Identities=19%  Similarity=0.199  Sum_probs=86.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc--cCceeEEE---EcCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA--AHKTKIWL---VGDD  369 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~--~~~~~vwi---vg~~  369 (474)
                      +.++|++-|--   +||+.+|+.|.+.|-+++.  .++++.+.+..+...+.    +  +..+  +.+|||.+   .|..
T Consensus        38 ~g~~v~IqG~G---nVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~----~--~~~~~~~~~cDIl~PcA~~~~  108 (230)
T d1leha1          38 EGLAVSVQGLG---NVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADA----V--APNAIYGVTCDIFAPCALGAV  108 (230)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEE----C--CGGGTTTCCCSEEEECSCSCC
T ss_pred             CCCEEEEECCC---HHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcc----c--CCcccccccccEecccccccc
Confidence            46799999986   9999999999999999999  67777777766532211    1  1112  26788877   5555


Q ss_pred             CChhhhhcCCCCceeecccccCccCCCCCeeeecCCc-ccc--CCCCccccccccccCcchhHH----HHHhhhhh-hhc
Q 011973          370 LTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPA-MII--PPSLSNMHSCENWLGRRVMSA----WRIAGIIH-ALE  441 (474)
Q Consensus       370 i~~~eq~~a~~G~~f~~~~~v~p~~~R~dc~y~~~~a-m~v--P~~~~~~~~~e~~~prr~~~A----c~a~~~v~-alE  441 (474)
                      |+++...+.                   .|.++-.+| -.+  |+.-+      .-..|+++++    +-|+|++- ++|
T Consensus       109 I~~~~~~~l-------------------~ak~Ive~ANn~~t~~ea~~------~L~~rGI~~iPD~laNAGGVi~s~~E  163 (230)
T d1leha1         109 LNDFTIPQL-------------------KAKVIAGSADNQLKDPRHGK------YLHELGIVYAPDYVINAGGVINVADE  163 (230)
T ss_dssp             BSTTHHHHC-------------------CCSEECCSCSCCBSSHHHHH------HHHHHTCEECCHHHHTTHHHHHHHHG
T ss_pred             cChHHhhcc-------------------CccEEEecccCCCCCchHHH------HHHhhCcEEEeehhhcccchhhhhhh
Confidence            555554332                   255555444 111  22111      1123344443    55666665 444


Q ss_pred             --CCCCCccc-hh---hhhHHHHHHHHHhCCCcc
Q 011973          442 --GWDLNECG-QT---MCDIHQVWHASLRHGFRP  469 (474)
Q Consensus       442 --gw~~~e~G-~i---v~~id~iw~aa~kHGF~p  469 (474)
                        +|+.++.= ++   .+.+++||+.|.++|-.|
T Consensus       164 ~~~~~~~~~~~~l~~I~~~~~~vl~~a~~~~~~~  197 (230)
T d1leha1         164 LYGYNRTRAMKRVDGIYDSIEKIFAISKRDGVPS  197 (230)
T ss_dssp             GGCCCHHHHHHHHTHHHHHHHHHHHHHHHTTCCH
T ss_pred             hhCCCHHHHHHHHHHHHHHHHHHHHHHHHHCcCH
Confidence              77766543 33   599999999999999654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.43  E-value=0.0053  Score=55.87  Aligned_cols=40  Identities=23%  Similarity=0.228  Sum_probs=34.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  339 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~  339 (474)
                      .+.|+|+|+++  -||+|+|+.|+++|.+|.+  |++|++++..
T Consensus         4 gK~~lVTGas~--GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~   45 (234)
T d1o5ia_           4 DKGVLVLAASR--GIGRAVADVLSQEGAEVTICARNEELLKRSG   45 (234)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHTC
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHhcC
Confidence            47899999997  9999999999999999999  8887766543

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.42  E-value=0.0055  Score=55.88  Aligned_cols=43  Identities=14%  Similarity=0.130  Sum_probs=37.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHh---ccCcEEEe--cchhhHHHHHhhCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLC---QMGIKVAT--ICKDDYEKLKLRIP  343 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~---~~~v~v~l--~~~~~~~~l~~~~~  343 (474)
                      ++|+++||++  =||+++|+.|+   ++|.+|.+  |++++++++++...
T Consensus         3 KtilITGas~--GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~   50 (248)
T d1snya_           3 NSILITGCNR--GLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK   50 (248)
T ss_dssp             SEEEESCCSS--HHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHH
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHh
Confidence            5799999997  89999999986   68999999  99999998875433

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.41  E-value=0.014  Score=49.69  Aligned_cols=41  Identities=20%  Similarity=0.166  Sum_probs=37.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      .+++.++|+-   .+|.++|..|.+.|.+|.+  |++++.+++++.
T Consensus         1 sk~iaIiGaG---~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           1 SKTYAVLGLG---NGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECcc---HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            4789999995   9999999999999999999  899999999876

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.36  E-value=0.0068  Score=53.03  Aligned_cols=66  Identities=17%  Similarity=0.173  Sum_probs=49.3

Q ss_pred             CcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccc-c-c-CceeEEE
Q 011973          294 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY-A-A-HKTKIWL  365 (474)
Q Consensus       294 ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~-~-~-~~~~vwi  365 (474)
                      ++...++|++.|+-|   .|+|++.+|++.+.++.+  |+.++.+++.+.+....  ++. ..++ + . .+++++|
T Consensus        14 ~~~~~k~vlIlGaGG---aarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~--~~~-~~~~~~~~~~~~diiI   84 (171)
T d1p77a1          14 WLRPNQHVLILGAGG---ATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG--NIQ-AVSMDSIPLQTYDLVI   84 (171)
T ss_dssp             CCCTTCEEEEECCSH---HHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS--CEE-EEEGGGCCCSCCSEEE
T ss_pred             CCCCCCEEEEECCcH---HHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc--ccc-hhhhccccccccceee
Confidence            445677899999975   699999999998889888  99999999999876443  212 2222 2 2 6677777

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=95.34  E-value=0.0081  Score=54.93  Aligned_cols=36  Identities=19%  Similarity=0.269  Sum_probs=30.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      -+.++++|++|++-||+|+|+.|+++|.+|.+  |+++
T Consensus         5 gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~   42 (274)
T d2pd4a1           5 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES   42 (274)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            46789999987335999999999999999999  6653

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=95.26  E-value=0.0085  Score=52.02  Aligned_cols=63  Identities=21%  Similarity=0.209  Sum_probs=45.4

Q ss_pred             cCcCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecccccCceeEEE
Q 011973          293 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL  365 (474)
Q Consensus       293 ~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~~vwi  365 (474)
                      .+++ .++|++.|+-|   .|+|++.+|++.|+ ++.+  |++++.++|++.++...      ..++...+++++|
T Consensus        13 ~~~~-~~~vlIlGaGG---aarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~------~~~~~~~~~DliI   78 (167)
T d1npya1          13 HLNK-NAKVIVHGSGG---MAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY------INSLENQQADILV   78 (167)
T ss_dssp             TCCT-TSCEEEECSST---THHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE------ESCCTTCCCSEEE
T ss_pred             CCCC-CCeEEEECCCH---HHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh------hhcccccchhhhe
Confidence            3443 46899999975   89999999999997 5666  99999999988754332      1122224567777

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.24  E-value=0.0053  Score=56.83  Aligned_cols=45  Identities=20%  Similarity=0.256  Sum_probs=38.5

Q ss_pred             cEE-EEeccCCCchhHHHHHHHHhcc-CcEEEe--cchhhHHHHHhhCccc
Q 011973          299 AHV-LLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKLRIPVE  345 (474)
Q Consensus       299 ~~V-~l~Gatg~~kig~ava~~L~~~-~v~v~l--~~~~~~~~l~~~~~~~  345 (474)
                      ++| +|+|+++  =||+++|+.|+++ |-+|.+  |++++++++.+++..+
T Consensus         3 ~rVAlVTGas~--GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~   51 (275)
T d1wmaa1           3 IHVALVTGGNK--GIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE   51 (275)
T ss_dssp             CCEEEESSCSS--HHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT
T ss_pred             CeEEEECCCCC--HHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            467 5679996  9999999999976 899999  9999999998887554

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=95.22  E-value=0.0094  Score=55.30  Aligned_cols=45  Identities=18%  Similarity=0.212  Sum_probs=37.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCcc
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIPV  344 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~-~~~~~~l~~~~~~  344 (474)
                      -+.++|+|+++  -||+|+|+.|+++|.+|.+  |+ +++.+++++++..
T Consensus         7 gK~alITGas~--GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~   54 (261)
T d1geea_           7 GKVVVITGSST--GLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK   54 (261)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHh
Confidence            46789999997  8999999999999999999  65 4577888777544

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.16  E-value=0.015  Score=49.55  Aligned_cols=80  Identities=16%  Similarity=0.121  Sum_probs=51.6

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecc-ccc-CceeEEEEc-------C
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS-YAA-HKTKIWLVG-------D  368 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~-~~~-~~~~vwivg-------~  368 (474)
                      +|.++|+ |  .+|+++|+.|++.|.+|+.  |+++..++.+++-.-.      ..++ .++ +++|++|+-       +
T Consensus         2 kI~iIG~-G--~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~------~~~~~~~~~~~~DiIilavp~~~~~~   72 (165)
T d2f1ka2           2 KIGVVGL-G--LIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVD------EAGQDLSLLQTAKIIFLCTPIQLILP   72 (165)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCS------EEESCGGGGTTCSEEEECSCHHHHHH
T ss_pred             EEEEEee-c--HHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccc------eeeeecccccccccccccCcHhhhhh
Confidence            5788988 6  9999999999999999999  8888888776541111      1222 244 778776631       1


Q ss_pred             cCChhhhhcCCCCceeecccc
Q 011973          369 DLTGKEQARAPKGTIFIPYTQ  389 (474)
Q Consensus       369 ~i~~~eq~~a~~G~~f~~~~~  389 (474)
                      .+. +-....++++++++.+-
T Consensus        73 vl~-~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          73 TLE-KLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             HHH-HHGGGSCTTCEEEECCS
T ss_pred             hhh-hhhhhcccccceeeccc
Confidence            121 11123466777776653

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=95.09  E-value=0.042  Score=53.49  Aligned_cols=139  Identities=13%  Similarity=0.057  Sum_probs=89.3

Q ss_pred             cCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhHH
Q 011973          244 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  314 (474)
Q Consensus       244 ~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig~  314 (474)
                      .|+|+++-=-=|....|-.-.+..+.-+++ +.-+-+.||+.+|+       |++.+-+ +++.+++.++|+-   ..|+
T Consensus        65 ~g~K~v~~~p~N~~~Glp~i~g~~~L~d~~TG~p~al~d~~~LTa~RTaA~salaa~~LA~~da~~l~iiG~G---~QA~  141 (340)
T d1x7da_          65 YAFKYVNGHPANTARNLHTVMAFGVLADVDSGYPVLLSELTIATALRTAATSLMAAQALARPNARKMALIGNG---AQSE  141 (340)
T ss_dssp             EEEEEEEECGGGGGGTCCSEEEEEEEEETTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECCS---TTHH
T ss_pred             EEEEEEEECCCccccCCCcceEEEEEEECCCCCEEEEEcchhhhhhHHHHHHHHHHHHhhccCCceEEEEccc---HHHH
Confidence            577776653333322222222323333333 34488999999974       3444554 6788999999987   7899


Q ss_pred             HHHHHHh-ccCc-EEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE---cC----cCChhhhhcCCCC
Q 011973          315 AVASSLC-QMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV---GD----DLTGKEQARAPKG  381 (474)
Q Consensus       315 ava~~L~-~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv---g~----~i~~~eq~~a~~G  381 (474)
                      .-+++++ -+++ +|.+  |++++-+++.+++....+..+..+.+.+ + +.++|++.   .+    .++++   |.+||
T Consensus       142 ~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~eav~~ADIi~t~Tas~s~~Pv~~~~---~l~pG  218 (340)
T d1x7da_         142 FQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAYATIITPD---MLEPG  218 (340)
T ss_dssp             HHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSSEEEEECGG---GCCTT
T ss_pred             HHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCCHHHHHhcCCceeeccccCCCCcccchh---hcCCC
Confidence            9999888 4444 4444  8999999999987665555643444555 4 77777652   11    44554   45999


Q ss_pred             ceeeccc
Q 011973          382 TIFIPYT  388 (474)
Q Consensus       382 ~~f~~~~  388 (474)
                      +|+..+.
T Consensus       219 ~hI~aiG  225 (340)
T d1x7da_         219 MHLNAVG  225 (340)
T ss_dssp             CEEEECS
T ss_pred             CEEeecc
Confidence            9998875

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=95.08  E-value=0.01  Score=54.30  Aligned_cols=29  Identities=24%  Similarity=0.319  Sum_probs=27.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ++|+|+|+||  -||+.+++.|.++|.+|+.
T Consensus         1 ~KILVTGatG--fIGs~lv~~Ll~~g~~V~~   29 (338)
T d1orra_           1 AKLLITGGCG--FLGSNLASFALSQGIDLIV   29 (338)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCcCEEEE
Confidence            5799999999  9999999999999999987

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.07  E-value=0.0048  Score=55.41  Aligned_cols=31  Identities=16%  Similarity=0.338  Sum_probs=27.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCc--EEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l  329 (474)
                      ..++|+|+||||  -||+.+++.|.++|.  +|..
T Consensus        13 ~~k~IlItGaTG--~iG~~l~~~Ll~~g~~~~v~~   45 (232)
T d2bkaa1          13 QNKSVFILGASG--ETGRVLLKEILEQGLFSKVTL   45 (232)
T ss_dssp             TCCEEEEECTTS--HHHHHHHHHHHHHTCCSEEEE
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHhCCCCCEEEE
Confidence            567899999999  999999999998884  7777

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.97  E-value=0.026  Score=46.49  Aligned_cols=40  Identities=28%  Similarity=0.378  Sum_probs=36.1

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  342 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~  342 (474)
                      +|+++|. |  .+|+.+|+.|.++|.+|++  .++++.++++++.
T Consensus         2 ~IvI~G~-G--~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~   43 (132)
T d1lssa_           2 YIIIAGI-G--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI   43 (132)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC
T ss_pred             EEEEECC-C--HHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh
Confidence            6899998 5  9999999999999999999  8899999987764

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=94.96  E-value=0.005  Score=55.61  Aligned_cols=31  Identities=13%  Similarity=0.247  Sum_probs=28.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .+++|+|+|+||  -||+.+++.|.++|.+|+.
T Consensus         2 ~k~KILVtGatG--~iG~~l~~~L~~~G~~V~~   32 (312)
T d1qyda_           2 KKSRVLIVGGTG--YIGKRIVNASISLGHPTYV   32 (312)
T ss_dssp             CCCCEEEESTTS--TTHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence            456799999999  9999999999999999877

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.95  E-value=0.067  Score=47.90  Aligned_cols=105  Identities=12%  Similarity=0.050  Sum_probs=72.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc------cceee-------ec-cc-----
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ------HNLVL-------ST-SY-----  356 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~------~~l~~-------~t-~~-----  356 (474)
                      -++|++.|+-   -+|..-++...+.|-+|..  .+.++++++++..+.--.      ..+-.       .+ ++     
T Consensus        29 pa~VvViGaG---vaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          29 PARVLVFGVG---VAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred             CcEEEEEcCc---HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHH
Confidence            5799999998   7999999988899999999  777888888876432110      00000       00 11     


Q ss_pred             ---c-c-CceeEEE---------EcCcCChhhhhcCCCCceeecccccCcc----CCCCCeeeecCCc
Q 011973          357 ---A-A-HKTKIWL---------VGDDLTGKEQARAPKGTIFIPYTQIPPR----KLRKDCFYHSTPA  406 (474)
Q Consensus       357 ---~-~-~~~~vwi---------vg~~i~~~eq~~a~~G~~f~~~~~v~p~----~~R~dc~y~~~~a  406 (474)
                         . . +++|++|         .=+.++++..++|+||.+.+|++ ++.-    ..|.|=+|.++++
T Consensus       106 ~~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDva-idqGGn~Ets~~~~~~~~~gV  172 (183)
T d1l7da1         106 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA-VEAGGNCPLSEPGKIVVKHGV  172 (183)
T ss_dssp             HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT-GGGTCSSTTCCTTCEEEETTE
T ss_pred             HHHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEe-ecCCCccccCcCCCEEEECCE
Confidence               1 1 5778877         44569999999999999999999 7655    3344444555443

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=94.88  E-value=0.015  Score=53.07  Aligned_cols=42  Identities=19%  Similarity=0.219  Sum_probs=32.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  338 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l  338 (474)
                      .-+.++|+||+|+.=||+|+|+.|+++|.+|.+  |+++..+..
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~   50 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA   50 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH
Confidence            457899999996223999999999999999998  554444433

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=94.80  E-value=0.0082  Score=57.11  Aligned_cols=29  Identities=21%  Similarity=0.238  Sum_probs=27.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +.|+|+||||  -||+.+|+.|.++|.+|..
T Consensus         2 K~vLITGatG--fiGs~lv~~Ll~~g~~V~~   30 (357)
T d1db3a_           2 KVALITGVTG--QDGSYLAEFLLEKGYEVHG   30 (357)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCcCEEEE
Confidence            5788999999  9999999999999999987

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.80  E-value=0.012  Score=54.10  Aligned_cols=41  Identities=15%  Similarity=0.067  Sum_probs=36.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      ++++|+|+++  =||+++|+.|+++|.+|.+  |+.++.++++..
T Consensus         1 ~TAlVTGas~--GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~   43 (252)
T d1zmta1           1 STAIVTNVKH--FGGMGSALRLSEAGHTVACHDESFKQKDELEAF   43 (252)
T ss_dssp             CEEEESSTTS--TTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhh
Confidence            4689999996  8999999999999999999  888888887765

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.75  E-value=0.093  Score=50.02  Aligned_cols=138  Identities=12%  Similarity=0.060  Sum_probs=89.0

Q ss_pred             cCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhHH
Q 011973          244 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  314 (474)
Q Consensus       244 ~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig~  314 (474)
                      .|+|+++.=-=|....+-.-.++.+.-+|+ +.-+.+.||+.+|+       |++.+-+ +++.+.|.++|+-   ..|+
T Consensus        62 ~g~K~v~~~p~N~~~glp~~~g~i~L~d~~TG~p~Aild~~~lT~~RTaA~sala~~~la~~~~~~l~iiGaG---~QA~  138 (320)
T d1omoa_          62 AGLKWVNSHPGNPDKGLPTVMALMILNSPETGFPLAVMDATYTTSLRTGAAGGIAAKYLARKNSSVFGFIGCG---TQAY  138 (320)
T ss_dssp             EEEEEEEECTTTGGGTSCSCCEEEEEECTTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECCS---HHHH
T ss_pred             ceEEEEEecccccccCcceEEEEEEEEecCCCcEEEEecccccccccchhHHHHHHHHhccCCccEEEEecCc---ccHH
Confidence            499998763333323333333456666655 34488999999975       4455544 5677888999876   8999


Q ss_pred             HHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc-CceeEEEE-----cCcCChhhhhcCCCCcee
Q 011973          315 AVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLV-----GDDLTGKEQARAPKGTIF  384 (474)
Q Consensus       315 ava~~L~--~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-~~~~vwiv-----g~~i~~~eq~~a~~G~~f  384 (474)
                      ..+++|+  +.-.+|.+  |++++.+++.+++.... .. +.++..++ ++++|++.     .-.++.+   |.+||+++
T Consensus       139 ~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~-~~-~~~~~~~a~~~aDiV~taT~s~~P~~~~~---~l~~G~hv  213 (320)
T d1omoa_         139 FQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRG-IS-ASVQPAEEASRCDVLVTTTPSRKPVVKAE---WVEEGTHI  213 (320)
T ss_dssp             HHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTT-CC-EEECCHHHHTSSSEEEECCCCSSCCBCGG---GCCTTCEE
T ss_pred             HHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcC-Cc-cccchhhhhccccEEEEeccCcccccchh---hcCCCCeE
Confidence            9999999  44445666  99999998888765432 11 22222234 77888772     1123333   56999998


Q ss_pred             ecccc
Q 011973          385 IPYTQ  389 (474)
Q Consensus       385 ~~~~~  389 (474)
                      .-+.-
T Consensus       214 ~~iGs  218 (320)
T d1omoa_         214 NAIGA  218 (320)
T ss_dssp             EECSC
T ss_pred             eecCC
Confidence            88864

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=94.74  E-value=0.0069  Score=53.94  Aligned_cols=30  Identities=20%  Similarity=0.275  Sum_probs=28.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +++|+|+||||  -||+++++.|.++|.+|..
T Consensus         3 kkKILVtGatG--~iG~~l~~~L~~~G~~V~~   32 (307)
T d1qyca_           3 RSRILLIGATG--YIGRHVAKASLDLGHPTFL   32 (307)
T ss_dssp             CCCEEEESTTS--TTHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCeEEE
Confidence            57899999999  9999999999999999987

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=94.66  E-value=0.049  Score=46.53  Aligned_cols=66  Identities=20%  Similarity=0.301  Sum_probs=42.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCc---cccccceeeeccccc-CceeEEEE
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIP---VEAQHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~---~~~~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      ..+|.++|+ |  .||+++|..|+++|.  .+.|  +++++.+-....+.   ..........++|++ ++++++|+
T Consensus         5 ~~KI~IIGa-G--~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~~~~adivvi   78 (146)
T d1ez4a1           5 HQKVVLVGD-G--AVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVI   78 (146)
T ss_dssp             BCEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEE
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHHhccccEEEE
Confidence            458999996 7  999999999998774  5666  66665554333221   112222234446665 88888665

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.55  E-value=0.061  Score=45.84  Aligned_cols=67  Identities=13%  Similarity=0.163  Sum_probs=43.0

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcc---ccccce-eeeccccc-CceeEEEE
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPV---EAQHNL-VLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~---~~~~~l-~~~t~~~~-~~~~vwiv  366 (474)
                      +.++|.++|| |  .||+++|..|+.++.  ++.|  +++++.+-...++..   ....+. +..++|++ ++++++|+
T Consensus         5 ~~~KI~IiGa-G--~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~daDvvvi   80 (148)
T d1ldna1           5 GGARVVVIGA-G--FVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVI   80 (148)
T ss_dssp             TSCEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEE
T ss_pred             CCCeEEEECc-C--HHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHhccceeEEE
Confidence            5678999998 8  999999999997775  5666  566664443333322   111221 23335565 88888765

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.55  E-value=0.11  Score=45.14  Aligned_cols=67  Identities=18%  Similarity=0.276  Sum_probs=42.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHH----HHHhhCccccccceeeeccccc-CceeEEEE
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYE----KLKLRIPVEAQHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~----~l~~~~~~~~~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      ...+|.++|+ |  .||+.+|..|+.++.  ++.|  +++++.+    +|+.-.........+..++|++ ++++|+|+
T Consensus        18 ~~~KI~IIGa-G--~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~adivvi   93 (159)
T d2ldxa1          18 SRCKITVVGV-G--DVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANSKLVII   93 (159)
T ss_dssp             CCCEEEEECC-S--HHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTEEEEEE
T ss_pred             CCCeEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhhccccEEEE
Confidence            4668999997 8  999999999997776  5666  5565544    3433222222112223335555 88888775

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=94.43  E-value=0.014  Score=53.87  Aligned_cols=42  Identities=12%  Similarity=0.099  Sum_probs=34.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      .-+.|+++|+++  -||+++|+.|+++|.+|.+  |+.++.+.+++
T Consensus         4 ~gK~vlITGgs~--GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~   47 (254)
T d1sbya1           4 TNKNVIFVAALG--GIGLDTSRELVKRNLKNFVILDRVENPTALAE   47 (254)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTCCSEEEEEESSCCHHHHHH
T ss_pred             CCCEEEEecCCC--HHHHHHHHHHHHCCCEEEEEECCcccHHHHHH
Confidence            357899999997  9999999999999999877  66666555543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=94.32  E-value=0.022  Score=52.36  Aligned_cols=39  Identities=23%  Similarity=0.302  Sum_probs=33.3

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  338 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l  338 (474)
                      -+.|+++|+++  =||+++|+.|+++|.+|.+  |+++..+..
T Consensus         5 GK~alITGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~   45 (248)
T d2d1ya1           5 GKGVLVTGGAR--GIGRAIAQAFAREGALVALCDLRPEGKEVA   45 (248)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSTTHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            46789999997  9999999999999999999  777765533

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=94.20  E-value=0.021  Score=51.49  Aligned_cols=44  Identities=14%  Similarity=0.185  Sum_probs=33.6

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      .+.|+++|++|+-=||++||+.|+++|.+|.+  |+++..+.+++.
T Consensus         5 gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~   50 (258)
T d1qsga_           5 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEF   50 (258)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHH
T ss_pred             CCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Confidence            47899999985123889999999999999999  765545544443

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.14  E-value=0.058  Score=47.46  Aligned_cols=88  Identities=17%  Similarity=0.215  Sum_probs=67.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--Ec--CcC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VG--DDL  370 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg--~~i  370 (474)
                      .-++|.|+|--   +||+.+|+.|...|-+|++.+.+....|+.... +.     ++.+.+ + ..++++|  -|  +.|
T Consensus        23 ~Gk~v~V~GyG---~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~d-G~-----~v~~~~~a~~~adivvtaTGn~~vI   93 (163)
T d1li4a1          23 AGKVAVVAGYG---DVGKGCAQALRGFGARVIITEIDPINALQAAME-GY-----EVTTMDEACQEGNIFVTTTGCIDII   93 (163)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TC-----EECCHHHHTTTCSEEEECSSCSCSB
T ss_pred             cCCEEEEeccc---cccHHHHHHHHhCCCeeEeeecccchhHHhhcC-ce-----EeeehhhhhhhccEEEecCCCccch
Confidence            56789999965   999999999999999999977777778877622 22     122333 3 5556666  34  579


Q ss_pred             ChhhhhcCCCCceeecccccCcc
Q 011973          371 TGKEQARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       371 ~~~eq~~a~~G~~f~~~~~v~p~  393 (474)
                      +.|+...|+.|++.+-.-.|+-+
T Consensus        94 ~~eh~~~MKdgaIL~N~Ghfd~E  116 (163)
T d1li4a1          94 LGRHFEQMKDDAIVCNIGHFDVE  116 (163)
T ss_dssp             CHHHHTTCCTTEEEEECSSSTTS
T ss_pred             hHHHHHhccCCeEEEEeccccce
Confidence            99999999999999998776554

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.08  E-value=0.019  Score=49.94  Aligned_cols=45  Identities=20%  Similarity=0.195  Sum_probs=37.6

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~  344 (474)
                      -..++|++.|+-|   .++|++.+|.+.| ++.+  |+.++.++|.+++..
T Consensus        16 ~~~k~vlIlGaGG---~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~   62 (177)
T d1nvta1          16 VKDKNIVIYGAGG---AARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE   62 (177)
T ss_dssp             CCSCEEEEECCSH---HHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCcH---HHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence            3567999999985   7899999998877 7777  999999999887544

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.06  E-value=0.017  Score=51.17  Aligned_cols=35  Identities=20%  Similarity=0.333  Sum_probs=30.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      .+.++++|+++  -||+|+|+.|+++|.+|.+  |+++.
T Consensus         1 DK~alITGas~--GIG~aiA~~la~~Ga~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGAS--GLGRAAALALKARGYRVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCccc
Confidence            36789999997  9999999999999999999  66653

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=93.89  E-value=0.054  Score=47.12  Aligned_cols=120  Identities=14%  Similarity=0.152  Sum_probs=67.1

Q ss_pred             hhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcE-EEe--cchhhHHHHHh---hCccccccceeeeccc-
Q 011973          284 SLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKL---RIPVEAQHNLVLSTSY-  356 (474)
Q Consensus       284 sltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~-v~l--~~~~~~~~l~~---~~~~~~~~~l~~~t~~-  356 (474)
                      -...+.--+.++-..++|++.|+-|   .|+|++.+|++.|.+ +.+  |+.++.++++.   ++....... +....+ 
T Consensus         4 Gf~~~l~~~~~~l~~k~vlIlGaGG---aarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~   79 (182)
T d1vi2a1           4 GHIRAIKESGFDIKGKTMVLLGAGG---ASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCV-VTVTDLA   79 (182)
T ss_dssp             HHHHHHHHTTCCCTTCEEEEECCSH---HHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCE-EEEEETT
T ss_pred             HHHHHHHHcCCCcCCCEEEEECCcH---HHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcc-eEeeecc
Confidence            3344444445555678999999974   789999999988885 445  77776665543   333333222 222222 


Q ss_pred             --c----c-CceeEEEEcCcCC---------hhhhhcCCCCceeecccccCccC------CC-CCeeeecCCccc
Q 011973          357 --A----A-HKTKIWLVGDDLT---------GKEQARAPKGTIFIPYTQIPPRK------LR-KDCFYHSTPAMI  408 (474)
Q Consensus       357 --~----~-~~~~vwivg~~i~---------~~eq~~a~~G~~f~~~~~v~p~~------~R-~dc~y~~~~am~  408 (474)
                        +    . .+++++|--..+.         +.+....+++.+++|+. ..|.+      .| .-|.++.+..|-
T Consensus        80 ~~~~~~~~~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~-Y~p~~T~ll~~a~~~g~~~i~Gl~Ml  153 (182)
T d1vi2a1          80 DQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECV-YNPHMTKLLQQAQQAGCKTIDGYGML  153 (182)
T ss_dssp             CHHHHHHHHHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECC-CSSSSCHHHHHHHTTTCEEECHHHHH
T ss_pred             cccchhhhhcccceeccccCCccccccchhhhhHHHhhhcchhhHHhh-cCccccHHHHHHHHCcCeEeccHHHH
Confidence              1    1 4567777221111         12333457777777776 33331      11 445566655553

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.88  E-value=0.044  Score=46.81  Aligned_cols=65  Identities=12%  Similarity=0.167  Sum_probs=39.1

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc-------EEEe----cchhhHHHHHhhCcc---ccccceeeecc--ccc-Cce
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI-------KVAT----ICKDDYEKLKLRIPV---EAQHNLVLSTS--YAA-HKT  361 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v-------~v~l----~~~~~~~~l~~~~~~---~~~~~l~~~t~--~~~-~~~  361 (474)
                      -+|.++||+|  .||+++|..|++.++       .+.+    +++++.+.+..++..   ..-.. +..++  +++ +++
T Consensus         4 ~KV~IiGA~G--~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   80 (154)
T d5mdha1           4 IRVLVTGAAG--QIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKD-VIATDKEEIAFKDL   80 (154)
T ss_dssp             EEEEESSTTS--HHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEE-EEEESCHHHHTTTC
T ss_pred             eEEEEECCCC--HHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccc-cccCcccccccCCc
Confidence            3799999999  999999999996554       2333    344556655443211   11111 11222  234 888


Q ss_pred             eEEEE
Q 011973          362 KIWLV  366 (474)
Q Consensus       362 ~vwiv  366 (474)
                      +|+|+
T Consensus        81 dvVVi   85 (154)
T d5mdha1          81 DVAIL   85 (154)
T ss_dssp             SEEEE
T ss_pred             eEEEE
Confidence            88776

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.84  E-value=0.021  Score=51.35  Aligned_cols=44  Identities=16%  Similarity=0.330  Sum_probs=35.1

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCcccc
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIPVEA  346 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~-~~~~~~l~~~~~~~~  346 (474)
                      .+|+|+++  -||+|+|+.|+++|.+|.+  |+ ++..+++.+++....
T Consensus         4 AlVTGas~--GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~   50 (266)
T d1mxha_           4 AVITGGAR--RIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR   50 (266)
T ss_dssp             EEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS
T ss_pred             EEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc
Confidence            47889997  8999999999999999999  55 445677777755543

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=93.69  E-value=0.047  Score=42.18  Aligned_cols=54  Identities=20%  Similarity=0.278  Sum_probs=42.0

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      +||+..+..+     ++...+|++.|++|  -||.+..+.+...|.+|..  +++|+.+.+++
T Consensus        14 lTA~~al~~~~~~~~~~~~~~vlI~gasG--gVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~   74 (77)
T d1o8ca2          14 FTAMLCVMALEDAGVRPQDGEIVVTGASG--GVGSTAVALLHKLGYQVVAVSGRESTHEYLKS   74 (77)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCEEEESSTTS--HHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred             HHHHHHHHHHHhhhhccCCCcEEEEeCCC--cHHHHHHHHHHHcCCeEEEEECCHHHHHHHHH
Confidence            5665544322     34567899999999  9999999987799999986  78888887765

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=93.64  E-value=0.074  Score=44.96  Aligned_cols=66  Identities=14%  Similarity=0.151  Sum_probs=40.9

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCcc-----ccccceeeeccccc-CceeEEEE
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPV-----EAQHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~-----~~~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      +++|.++|+ |  .||+++|..|+++++ .+.+  .++++.+.....+..     .....+...++|++ ++++++|+
T Consensus         1 r~KI~IIGa-G--~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~~~advvvi   75 (142)
T d1uxja1           1 RKKISIIGA-G--FVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVV   75 (142)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEE
T ss_pred             CCeEEEECC-C--HHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHhcCCCEEEE
Confidence            368999997 8  999999999997776 5555  555554444333221     12122222335665 78877654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.62  E-value=0.026  Score=51.79  Aligned_cols=29  Identities=21%  Similarity=0.249  Sum_probs=27.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ++|+++|+||  -||+.+++.|.++|.+|.-
T Consensus         1 k~vLItG~tG--fiG~~l~~~Ll~~g~~V~~   29 (321)
T d1rpna_           1 RSALVTGITG--QDGAYLAKLLLEKGYRVHG   29 (321)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHCcCEEEE
Confidence            5899999999  9999999999999999875

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.62  E-value=0.013  Score=53.52  Aligned_cols=38  Identities=26%  Similarity=0.252  Sum_probs=32.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHH
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  336 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~  336 (474)
                      ..+.|+++|+++  -||+|+|+.|+++|.+|.+  |++++.+
T Consensus         6 ~gK~~lITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~~~   45 (237)
T d1uzma1           6 VSRSVLVTGGNR--GIGLAIAQRLAADGHKVAVTHRGSGAPK   45 (237)
T ss_dssp             CCCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSSCCCT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCcchhc
Confidence            567899999997  9999999999999999999  6665443

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.62  E-value=0.028  Score=47.90  Aligned_cols=102  Identities=15%  Similarity=0.161  Sum_probs=69.3

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE--Ec------
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG------  367 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--vg------  367 (474)
                      +|-++|- |  .+|+++|+.|.+.|.+|..  |++++.++++++-...       .++.++  ++++++|  |-      
T Consensus         2 kIgiIGl-G--~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~-------~~~~~e~~~~~d~ii~~v~~~~~v~   71 (161)
T d1vpda2           2 KVGFIGL-G--IMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET-------ASTAKAIAEQCDVIITMLPNSPHVK   71 (161)
T ss_dssp             EEEEECC-S--TTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-------CSSHHHHHHHCSEEEECCSSHHHHH
T ss_pred             EEEEEeh-h--HHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhh-------cccHHHHHhCCCeEEEEcCCHHHHH
Confidence            4778887 4  8999999999999999999  8999999988752211       113332  5565544  22      


Q ss_pred             CcCC--hhhhhcCCCCceeecccccCcc-------CCC-CCeeeecCCccccCC
Q 011973          368 DDLT--GKEQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPP  411 (474)
Q Consensus       368 ~~i~--~~eq~~a~~G~~f~~~~~v~p~-------~~R-~dc~y~~~~am~vP~  411 (474)
                      +.+.  ..-...+++|+++++.+-.+|+       .++ ++..|.+.|.+--|.
T Consensus        72 ~v~~~~~~~~~~~~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapv~gg~~  125 (161)
T d1vpda2          72 EVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEP  125 (161)
T ss_dssp             HHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHH
T ss_pred             HHHhCCcchhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCceecccccCChh
Confidence            1221  1234467899999999998876       222 567788877765444

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=93.47  E-value=0.012  Score=49.27  Aligned_cols=36  Identities=17%  Similarity=0.324  Sum_probs=30.5

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  338 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l  338 (474)
                      +|+++|+ |  .||+++|..|++.|.+|++  |++++.+.+
T Consensus         2 kI~IiGa-G--~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~   39 (167)
T d1ks9a2           2 KITVLGC-G--ALGQLWLTALCKQGHEVQGWLRVPQPYCSV   39 (167)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSCCSEEEE
T ss_pred             EEEEECc-C--HHHHHHHHHHHHCCCceEEEEcCHHHhhhh
Confidence            6899999 7  9999999999999999999  666644433

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=93.42  E-value=0.047  Score=49.79  Aligned_cols=45  Identities=13%  Similarity=0.228  Sum_probs=34.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhCc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRIP  343 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~-~~~~~l~~~~~  343 (474)
                      +.+.++|+|+++  -||+|+|+.|+++|.+|.+  |++ ++.+++.++.+
T Consensus         4 ~gKvalVTGas~--GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g   51 (247)
T d2ew8a1           4 KDKLAVITGGAN--GIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLG   51 (247)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcC
Confidence            346789999997  9999999999999999999  544 33444444444

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=93.38  E-value=0.099  Score=45.96  Aligned_cols=88  Identities=14%  Similarity=0.145  Sum_probs=70.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--Ec--CcC
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VG--DDL  370 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg--~~i  370 (474)
                      .-++|+|+|--   ++|+.||+.|...|-+|++...|....||... .+.+     +.+.+ + +.++++|  -|  +.|
T Consensus        22 aGk~vvV~GYG---~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~m-dGf~-----v~~~~~a~~~aDi~vTaTGn~~vI   92 (163)
T d1v8ba1          22 SGKIVVICGYG---DVGKGCASSMKGLGARVYITEIDPICAIQAVM-EGFN-----VVTLDEIVDKGDFFITCTGNVDVI   92 (163)
T ss_dssp             TTSEEEEECCS---HHHHHHHHHHHHHTCEEEEECSCHHHHHHHHT-TTCE-----ECCHHHHTTTCSEEEECCSSSSSB
T ss_pred             cCCEEEEeccc---ccchhHHHHHHhCCCEEEEEecCchhhHHHHh-cCCc-----cCchhHccccCcEEEEcCCCCccc
Confidence            57799999987   99999999999999999997778888888864 3331     23443 3 6778877  23  469


Q ss_pred             ChhhhhcCCCCceeecccccCcc
Q 011973          371 TGKEQARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       371 ~~~eq~~a~~G~~f~~~~~v~p~  393 (474)
                      +.++.++|+.|++.|-.-+|+-+
T Consensus        93 ~~~h~~~MKdgaIl~N~GHfd~E  115 (163)
T d1v8ba1          93 KLEHLLKMKNNAVVGNIGHFDDE  115 (163)
T ss_dssp             CHHHHTTCCTTCEEEECSSTTTS
T ss_pred             cHHHHHHhhCCeEEEeccccchh
Confidence            99999999999999998887655

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=93.29  E-value=0.03  Score=51.28  Aligned_cols=30  Identities=23%  Similarity=0.220  Sum_probs=28.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +++|+|+|+||  =||+++++.|.++|..|+.
T Consensus         2 kkkIlITG~tG--fiG~~l~~~L~~~g~~vi~   31 (315)
T d1e6ua_           2 KQRVFIAGHRG--MVGSAIRRQLEQRGDVELV   31 (315)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHTTCTTEEEE
T ss_pred             CCEEEEEcCCc--HHHHHHHHHHHHCcCEEEE
Confidence            56899999999  9999999999999998887

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=93.24  E-value=0.025  Score=46.19  Aligned_cols=40  Identities=15%  Similarity=0.235  Sum_probs=35.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      ++++++|..   .+|+.+|+.|.++|.+|++  .++++.++++++
T Consensus         1 k~~iIiG~G---~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~   42 (134)
T d2hmva1           1 KQFAVIGLG---RFGGSIVKELHRMGHEVLAVDINEEKVNAYASY   42 (134)
T ss_dssp             CCEEEECCS---HHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTT
T ss_pred             CEEEEECCC---HHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHh
Confidence            578999994   9999999999999999999  888988888655

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.21  E-value=0.048  Score=50.75  Aligned_cols=49  Identities=14%  Similarity=0.272  Sum_probs=37.9

Q ss_pred             hcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c----chhhHHHHHhhC
Q 011973          292 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I----CKDDYEKLKLRI  342 (474)
Q Consensus       292 ~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~----~~~~~~~l~~~~  342 (474)
                      +.+|...+.|+|+|+||  -||+.+++.|.++|.+|..  |    +.+..+.++...
T Consensus        10 ~~~~~~~k~iLVTG~tG--fIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~   64 (341)
T d1sb8a_          10 KELPAQPKVWLITGVAG--FIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLV   64 (341)
T ss_dssp             HHHHHSCCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHS
T ss_pred             HhCCCCCCEEEEecCCC--HHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhh
Confidence            34566788999999999  9999999999999999987  1    334455554443

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.07  E-value=0.098  Score=44.58  Aligned_cols=28  Identities=21%  Similarity=0.249  Sum_probs=24.2

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCc--EEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGI--KVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v--~v~l  329 (474)
                      +|.++||+|  .||+++|..|..++.  .+.|
T Consensus         2 KV~IiGA~G--~VG~~~a~~l~~~~l~~el~L   31 (145)
T d1hyea1           2 KVTIIGASG--RVGSATALLLAKEPFMKDLVL   31 (145)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHTCTTCCEEEE
T ss_pred             EEEEECCCC--hHHHHHHHHHHhCCccccccc
Confidence            589999999  999999999998884  5555

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.96  E-value=0.094  Score=44.61  Aligned_cols=25  Identities=16%  Similarity=0.186  Sum_probs=22.8

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI  325 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v  325 (474)
                      ++|.++||+|  .||+++|..|++++.
T Consensus         1 sKv~IiGA~G--~VG~~~A~~l~~~~~   25 (144)
T d1mlda1           1 AKVAVLGASG--GIGQPLSLLLKNSPL   25 (144)
T ss_dssp             CEEEEETTTS--TTHHHHHHHHHTCTT
T ss_pred             CeEEEECCCC--hHHHHHHHHHHhCCc
Confidence            4799999999  999999999997776

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.95  E-value=0.11  Score=44.27  Aligned_cols=59  Identities=15%  Similarity=0.074  Sum_probs=44.9

Q ss_pred             hhHHHHHHhcC--cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 011973          284 SLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  345 (474)
Q Consensus       284 sltaAvvl~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~  345 (474)
                      -+||+-.+...  ++..+.|++.|++|  -||.+.++.+...|.+|+.  +++++.+.+++ ++..
T Consensus        13 ~~TA~~al~~~~~~~~g~~VlV~Ga~G--~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~-~Ga~   75 (174)
T d1yb5a2          13 YFTAYRALIHSACVKAGESVLVHGASG--GVGLAACQIARAYGLKILGTAGTEEGQKIVLQ-NGAH   75 (174)
T ss_dssp             HHHHHHHHHTTSCCCTTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCS
T ss_pred             HHHHHHHHHHHhCCCCCCEEEEEeccc--cccccccccccccCcccccccccccccccccc-cCcc
Confidence            45777666444  34566899999998  9999999988899999987  77778777764 4543

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=92.93  E-value=0.13  Score=43.60  Aligned_cols=65  Identities=15%  Similarity=0.201  Sum_probs=40.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHH----HHhhCccccccceeeeccccc-CceeEEEE
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEK----LKLRIPVEAQHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~----l~~~~~~~~~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      .+|.++|+ |  .||+++|..|+.+++  ++.|  +++++.+-    |+.-........+...++|++ ++++|+|+
T Consensus         2 ~Ki~IIGa-G--~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~daDvVVi   75 (143)
T d1llda1           2 TKLAVIGA-G--AVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVI   75 (143)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEE
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHhhCCcEEEE
Confidence            47999998 8  999999999997776  4555  56665543    333212212122223345665 88888664

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=92.92  E-value=0.17  Score=43.90  Aligned_cols=67  Identities=19%  Similarity=0.262  Sum_probs=41.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHH----HHhhCccccccceeeeccccc-CceeEEEE
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEK----LKLRIPVEAQHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~----l~~~~~~~~~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      ...+|.++|+ |  .||+++|..|+.+|.  ++.|  +++++.+-    |+.-.........+....|++ ++++++|+
T Consensus        19 ~~~KV~IIGa-G--~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~adiVVi   94 (160)
T d1i0za1          19 PNNKITVVGV-G--QVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVV   94 (160)
T ss_dssp             CSSEEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTCSEEEE
T ss_pred             CCCeEEEECC-C--HHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcccccEEEE
Confidence            3569999997 8  999999999997777  5555  55565533    332211111112223335555 88888775

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=92.90  E-value=0.061  Score=47.36  Aligned_cols=42  Identities=10%  Similarity=0.150  Sum_probs=29.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCc-------EEEe----cchhhHHHHHhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGI-------KVAT----ICKDDYEKLKLR  341 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v-------~v~l----~~~~~~~~l~~~  341 (474)
                      .-+|.++||+|  .||+.++..|++.++       .+.+    .+++.++-+..+
T Consensus        24 ~~kV~I~GA~G--~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~md   76 (175)
T d7mdha1          24 LVNIAVSGAAG--MISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAME   76 (175)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHH
T ss_pred             CcEEEEECCCc--HHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhh
Confidence            45899999999  999999999996443       3444    334555655544

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=92.80  E-value=0.094  Score=45.12  Aligned_cols=93  Identities=12%  Similarity=0.058  Sum_probs=61.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccccee-eeccc-cc-CceeEEEE--c--C
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV-LSTSY-AA-HKTKIWLV--G--D  368 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~-~~t~~-~~-~~~~vwiv--g--~  368 (474)
                      ++.|-++|- |  .+|+++|+.|.+.|.+|..  |++++.++++++-.......-. ...+. +. .+++++|.  -  +
T Consensus         2 ~~nIg~IGl-G--~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~   78 (176)
T d2pgda2           2 QADIALIGL-A--VMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQ   78 (176)
T ss_dssp             CBSEEEECC-S--HHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTH
T ss_pred             CCcEEEEeE-h--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchH
Confidence            567889997 4  9999999999999999999  9999999998873222211111 11122 11 45555442  0  0


Q ss_pred             c---CChhhhhcCCCCceeecccccCcc
Q 011973          369 D---LTGKEQARAPKGTIFIPYTQIPPR  393 (474)
Q Consensus       369 ~---i~~~eq~~a~~G~~f~~~~~v~p~  393 (474)
                      .   +...-...+++|+++++.+-++|.
T Consensus        79 ~v~~v~~~l~~~~~~g~iiid~sT~~~~  106 (176)
T d2pgda2          79 AVDNFIEKLVPLLDIGDIIIDGGNSEYR  106 (176)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECSCCCHH
T ss_pred             HHHHHHHHHHhccccCcEEEecCcchhH
Confidence            0   011223467899999999988887

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=92.77  E-value=0.11  Score=44.28  Aligned_cols=65  Identities=17%  Similarity=0.238  Sum_probs=39.5

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc--EEEecc----hhhHH----HHHhhCccccccceeeeccccc-CceeEEEE
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI--KVATIC----KDDYE----KLKLRIPVEAQHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l~~----~~~~~----~l~~~~~~~~~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      ++|.++||+|  .||+++|..|..++.  .+.|.+    +++.+    +|+.-++...... +...+|++ ++++|+|+
T Consensus         1 sKV~IiGaaG--~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~-i~~~~~~~~~~aDiVvi   76 (142)
T d1o6za1           1 TKVSVVGAAG--TVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTR-VRQGGYEDTAGSDVVVI   76 (142)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCE-EEECCGGGGTTCSEEEE
T ss_pred             CeEEEECCCC--cHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCce-EeeCCHHHhhhcCEEEE
Confidence            4799999999  999999999996665  455522    33333    3332222222122 33446665 88877664

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=92.74  E-value=0.082  Score=44.94  Aligned_cols=57  Identities=11%  Similarity=0.040  Sum_probs=47.1

Q ss_pred             ChhHHHHHHhcCc--CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          283 SSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       283 nsltaAvvl~~ip--~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      +-+||+..+.+..  +....|++.|+.|  -+|.++++.....|.+|+.  +++++.+.+++.
T Consensus        12 ~~~TA~~al~~~~~l~~g~~Vlv~ga~g--~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~l   72 (179)
T d1qora2          12 KGLTVYYLLRKTYEIKPDEQFLFHAAAG--GVGLIACQWAKALGAKLIGTVGTAQKAQSALKA   72 (179)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTB--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEEcccc--ccchHHHHHHHHhCCeEeecccchHHHHHHHhc
Confidence            4578888887663  3467899999998  9999999988899999988  888888887754

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=92.73  E-value=0.1  Score=43.74  Aligned_cols=57  Identities=21%  Similarity=0.366  Sum_probs=42.9

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeec-cccc-CceeEEEE
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA-HKTKIWLV  366 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t-~~~~-~~~~vwiv  366 (474)
                      +|.++|+ |  .+|.|+++.|.+.| .++.+  |++++.++|+++.+       +..+ +.++ +++|+++.
T Consensus         2 kI~fIG~-G--~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~-------~~~~~~~~~v~~~Div~l   63 (152)
T d1yqga2           2 NVYFLGG-G--NMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELG-------VETSATLPELHSDDVLIL   63 (152)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTC-------CEEESSCCCCCTTSEEEE
T ss_pred             EEEEEcC-c--HHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcc-------cccccccccccccceEEE
Confidence            4788898 5  99999999988776 88888  99999999988753       2222 3345 66777664

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=92.71  E-value=0.05  Score=47.26  Aligned_cols=55  Identities=25%  Similarity=0.294  Sum_probs=43.9

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      +||+..++.+     .++...|++.||+|  -||.+.+++....|.+|+-  +++++.+.+++-
T Consensus         6 lTA~~a~~~L~~~g~~~~~~~VLV~gaaG--gVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~l   67 (167)
T d1tt7a2           6 FTAALSVHRLEQNGLSPEKGSVLVTGATG--GVGGIAVSMLNKRGYDVVASTGNREAADYLKQL   67 (167)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEEESTTS--HHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCCEEEEeCCcc--hHHHHHHHHHHHcCCceEEEecCHHHHHHHHhh
Confidence            7888776654     22334599999999  9999999988899999987  788888888665

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=92.64  E-value=0.11  Score=44.67  Aligned_cols=55  Identities=22%  Similarity=0.122  Sum_probs=45.8

Q ss_pred             hHHHHHHhcCc--CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          285 LAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       285 ltaAvvl~~ip--~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      +||+-.+...-  +.-..|++.||+|  .||.+.++.....|.+|..  +++++.+.+++.
T Consensus        15 lTA~~al~~~~~v~~G~~VlV~ga~g--gvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~   73 (182)
T d1v3va2          15 LTAYFGLLEVCGVKGGETVLVSAAAG--AVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI   73 (182)
T ss_dssp             HHHHHHHHTTTCCCSSCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCEEEEEeCCC--chhHHHHHHHHccCCEEEEeCCCHHHHHHHHhh
Confidence            68988887663  3457899999998  9999999988899999987  788888777765

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=92.63  E-value=0.15  Score=43.42  Aligned_cols=65  Identities=14%  Similarity=0.187  Sum_probs=40.9

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcc---ccccc-eeeeccccc-CceeEEEE
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPV---EAQHN-LVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~---~~~~~-l~~~t~~~~-~~~~vwiv  366 (474)
                      ++|.++|+ |  .||+++|..|+.+|.  ++.|  .++++.+.....+..   ....+ .+..++|++ ++++++|+
T Consensus         2 kKI~IIGa-G--~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~adiVVi   75 (146)
T d1hyha1           2 RKIGIIGL-G--NVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVIS   75 (146)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEE
T ss_pred             CeEEEECc-C--HHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHHhccccEEEE
Confidence            68999996 8  999999999997764  5666  667765433333221   11111 233335565 88877664

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.52  E-value=0.1  Score=44.43  Aligned_cols=55  Identities=20%  Similarity=0.123  Sum_probs=43.8

Q ss_pred             hHHHHHHhcC--cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          285 LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       285 ltaAvvl~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      +||+..+...  .+..+.|++.|++|  -||.+.++++...|.++..  +++++.+.+++.
T Consensus        11 ~TA~~al~~~~~~~~g~~VlI~ga~g--~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~   69 (183)
T d1pqwa_          11 LTAWHSLCEVGRLSPGERVLIHSATG--GVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL   69 (183)
T ss_dssp             HHHHHHHHTTSCCCTTCEEEETTTTS--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT
T ss_pred             HHHHHHHHHHhCCCCCCEEEEECCCC--Ccccccchhhccccccceeeecccccccccccc
Confidence            6777666444  34567899999987  9999999988899999887  788888877753

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=92.50  E-value=0.039  Score=49.54  Aligned_cols=33  Identities=15%  Similarity=0.268  Sum_probs=29.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  333 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~  333 (474)
                      .+|+++|+++  -||+|+|+.|.++|.+|.+  |+++
T Consensus         3 gkVlITGas~--GIG~aia~~l~~~G~~V~~~~~~~~   37 (235)
T d1ooea_           3 GKVIVYGGKG--ALGSAILEFFKKNGYTVLNIDLSAN   37 (235)
T ss_dssp             EEEEEETTTS--HHHHHHHHHHHHTTEEEEEEESSCC
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCch
Confidence            4799999997  9999999999999999998  6554

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.44  E-value=0.062  Score=50.73  Aligned_cols=47  Identities=19%  Similarity=0.186  Sum_probs=37.3

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c---------chhhHHHHHhhCccc
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I---------CKDDYEKLKLRIPVE  345 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~---------~~~~~~~l~~~~~~~  345 (474)
                      +.+.++|+|+++  =||+++|+.|+++|.+|.+  +         +++..+++.+++...
T Consensus         6 ~gKvalITGas~--GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~   63 (302)
T d1gz6a_           6 DGRVVLVTGAGG--GLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR   63 (302)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc
Confidence            457889999997  9999999999999999997  2         355667776665443

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=92.30  E-value=0.036  Score=43.25  Aligned_cols=29  Identities=10%  Similarity=0.090  Sum_probs=26.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .++|+|.|.-   +-|.++|++|+++|.+|++
T Consensus         5 ~K~v~ViGlG---~sG~s~a~~L~~~g~~v~~   33 (93)
T d2jfga1           5 GKNVVIIGLG---LTGLSCVDFFLARGVTPRV   33 (93)
T ss_dssp             TCCEEEECCS---HHHHHHHHHHHHTTCCCEE
T ss_pred             CCEEEEEeEC---HHHHHHHHHHHHCCCEEEE
Confidence            4579999995   8899999999999999999

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=92.15  E-value=0.046  Score=50.66  Aligned_cols=35  Identities=17%  Similarity=0.154  Sum_probs=30.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  334 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~  334 (474)
                      .++|+|+|+||  -||+.+++.|.++|.+|..  |++..
T Consensus         8 ~KkILVTG~tG--fIGs~lv~~Ll~~g~~V~~~~r~~~~   44 (356)
T d1rkxa_           8 GKRVFVTGHTG--FKGGWLSLWLQTMGATVKGYSLTAPT   44 (356)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCSS
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCCCc
Confidence            47999999999  9999999999999999987  55443

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=92.14  E-value=0.054  Score=48.94  Aligned_cols=42  Identities=21%  Similarity=0.250  Sum_probs=32.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcE-EEe--cch---hhHHHHHhhC
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICK---DDYEKLKLRI  342 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~-v~l--~~~---~~~~~l~~~~  342 (474)
                      ..|+|+|++|  -||+++|+.|.++|.+ |.+  |+.   ++.+++.+++
T Consensus        10 gt~lVTGgs~--GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l   57 (259)
T d2fr1a1          10 GTVLVTGGTG--GVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAEL   57 (259)
T ss_dssp             SEEEEETTTS--HHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHH
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHH
Confidence            4799999997  9999999999999985 665  653   4455555553

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.01  E-value=0.12  Score=43.92  Aligned_cols=24  Identities=8%  Similarity=0.200  Sum_probs=21.7

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCc
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGI  325 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v  325 (474)
                      +|.++||+|  .||+++|..|++.++
T Consensus         6 KV~IiGA~G--~VG~~~a~~l~~~~l   29 (154)
T d1y7ta1           6 RVAVTGAAG--QIGYSLLFRIAAGEM   29 (154)
T ss_dssp             EEEESSTTS--HHHHHHHHHHHTTTT
T ss_pred             EEEEECCCC--HHHHHHHHHHHhccc
Confidence            799999999  999999999996654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=91.92  E-value=0.12  Score=44.25  Aligned_cols=70  Identities=17%  Similarity=0.152  Sum_probs=44.3

Q ss_pred             CcCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccc----cccceeeec-ccc-c-CceeE
Q 011973          294 LPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE----AQHNLVLST-SYA-A-HKTKI  363 (474)
Q Consensus       294 ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~----~~~~l~~~t-~~~-~-~~~~v  363 (474)
                      +.+++.+|.++|+ |  .||+.+|..|+..++ ++.|  .++++.+-....+...    .....+..+ +++ + +++++
T Consensus         3 ~~~k~~KI~IIGa-G--~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adi   79 (154)
T d1pzga1           3 LVQRRKKVAMIGS-G--MIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADC   79 (154)
T ss_dssp             CCSCCCEEEEECC-S--HHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSE
T ss_pred             cccCCCcEEEECC-C--HHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCe
Confidence            4567889999998 8  999999999997776 5555  5666555444433221    111122233 343 4 78888


Q ss_pred             EEE
Q 011973          364 WLV  366 (474)
Q Consensus       364 wiv  366 (474)
                      +|+
T Consensus        80 Vvi   82 (154)
T d1pzga1          80 VIV   82 (154)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            775

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=91.88  E-value=0.055  Score=48.31  Aligned_cols=28  Identities=18%  Similarity=0.302  Sum_probs=25.9

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      -|+++|+++  -||+|+|+.|.+.|.+|.+
T Consensus         3 VvlITGas~--GIG~aiA~~la~~Ga~V~~   30 (257)
T d1fjha_           3 IIVISGCAT--GIGAATRKVLEAAGHQIVG   30 (257)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             EEEEeCCCC--HHHHHHHHHHHHCCCEEEE
Confidence            478899997  9999999999999999987

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=91.75  E-value=0.076  Score=46.44  Aligned_cols=55  Identities=20%  Similarity=0.260  Sum_probs=43.6

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      +||+..++.+     .++..+|++.||+|  -||.+..+.....|.+|.-  +++++.+.+++.
T Consensus        14 lTA~~a~~~l~~~g~~~~~~~vlV~gasG--GVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~l   75 (177)
T d1o89a2          14 FTAMLCVMALEDAGVRPQDGEIVVTGASG--GVGSTAVALLHKLGYQVVAVSGRESTHEYLKSL   75 (177)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCEEEESSTTS--HHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEccc--cchHHHHHHHHHcCCCeEEEecchhHHHHHHhh
Confidence            7888766544     33445899999999  9999999988899999886  788887777543

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.67  E-value=0.062  Score=47.49  Aligned_cols=102  Identities=9%  Similarity=0.080  Sum_probs=59.2

Q ss_pred             cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc-cccccceeeecc--ccc--CceeEEEE
Q 011973          295 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP-VEAQHNLVLSTS--YAA--HKTKIWLV  366 (474)
Q Consensus       295 p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~-~~~~~~l~~~t~--~~~--~~~~vwiv  366 (474)
                      +-.-++|+++|...  =||+-+|..|.++|..|++   ++.+++..-..... .....++-..+.  .++  ..+||+|.
T Consensus        26 ~l~GK~vvVIGrS~--iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIs  103 (171)
T d1edza1          26 RLYGKKCIVINRSE--IVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT  103 (171)
T ss_dssp             TTTTCEEEEECCCT--TTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCCCEEEEECCcc--ccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEE
Confidence            34568999999997  8999999999999999998   22222111000000 000011111221  122  46788885


Q ss_pred             cCc-----CChhhhhcCCCCceeecccccCcc---CCCCCeeee
Q 011973          367 GDD-----LTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYH  402 (474)
Q Consensus       367 g~~-----i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~y~  402 (474)
                      +-+     ++.+.   .++|++++|+. ++..   +.++-|-|+
T Consensus       104 avG~p~~~i~~d~---ik~GavvIDvG-i~~~~~~~v~~~a~~i  143 (171)
T d1edza1         104 GVPSENYKFPTEY---IKEGAVCINFA-CTKNFSDDVKEKASLY  143 (171)
T ss_dssp             CCCCTTCCBCTTT---SCTTEEEEECS-SSCCBCGGGGTTEEEE
T ss_pred             ccCCCccccChhh---cccCceEeecc-cccccccchhheeeEE
Confidence            432     45544   49999999998 5433   344445554

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=91.53  E-value=0.14  Score=43.78  Aligned_cols=97  Identities=13%  Similarity=0.151  Sum_probs=62.6

Q ss_pred             hhHHHHHHhcCc-CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccc-c--
Q 011973          284 SLAAAVVVNSLP-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY-A--  357 (474)
Q Consensus       284 sltaAvvl~~ip-~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~-~--  357 (474)
                      -+||+-.++... +..++|++.|++|  -||.+.++.+...|.+|..  +++++.+.+++ ++.+.   .+..++. +  
T Consensus        13 ~~TA~~al~~~~~~~g~~VlI~ga~G--~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-lGa~~---~i~~~~~~~~~   86 (171)
T d1iz0a2          13 FLTAYLALKRAQARPGEKVLVQAAAG--ALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LGAEE---AATYAEVPERA   86 (171)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEESSTTB--HHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TTCSE---EEEGGGHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCEEEEEeccc--cchhhhhhhhcccccccccccccccccccccc-cccce---eeehhhhhhhh
Confidence            467887777654 3556899999998  9999999988899999887  77888877764 44433   2322222 1  


Q ss_pred             -c-CceeEEE--EcCcCChhhhhcCCCCceeecc
Q 011973          358 -A-HKTKIWL--VGDDLTGKEQARAPKGTIFIPY  387 (474)
Q Consensus       358 -~-~~~~vwi--vg~~i~~~eq~~a~~G~~f~~~  387 (474)
                       + ..+++++  +|+.+ +.-+..+.+|-.++-+
T Consensus        87 ~~~~g~D~v~d~~G~~~-~~~~~~l~~~G~~v~~  119 (171)
T d1iz0a2          87 KAWGGLDLVLEVRGKEV-EESLGLLAHGGRLVYI  119 (171)
T ss_dssp             HHTTSEEEEEECSCTTH-HHHHTTEEEEEEEEEC
T ss_pred             hccccccccccccchhH-HHHHHHHhcCCcEEEE
Confidence             1 4566655  66544 2333444555555554

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.46  E-value=0.13  Score=43.56  Aligned_cols=103  Identities=15%  Similarity=0.166  Sum_probs=67.6

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccc-cc-CceeEEE--EcCcCCh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY-AA-HKTKIWL--VGDDLTG  372 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~-~~-~~~~vwi--vg~~i~~  372 (474)
                      ++|-++|--   .+|+++|+.|.+.|.+|..  |++++.+.++++-....       .+. +. +.+++++  +.+.-+.
T Consensus         2 ~kIg~IGlG---~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~-------~~~~e~~~~~diii~~v~~~~~~   71 (162)
T d3cuma2           2 KQIAFIGLG---HMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAA-------RSARDAVQGADVVISMLPASQHV   71 (162)
T ss_dssp             CEEEEECCS---TTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC-------SSHHHHHTSCSEEEECCSCHHHH
T ss_pred             CEEEEEEEH---HHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhcccc-------chhhhhccccCeeeecccchhhH
Confidence            468899875   9999999999999999999  88888888876621111       122 22 4454433  2222111


Q ss_pred             h--------hhhcCCCCceeecccccCcc-------CCC-CCeeeecCCccccCC
Q 011973          373 K--------EQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPP  411 (474)
Q Consensus       373 ~--------eq~~a~~G~~f~~~~~v~p~-------~~R-~dc~y~~~~am~vP~  411 (474)
                      +        -.....+|.++++.+-++|+       .++ ++..|.+.|..--|.
T Consensus        72 ~~v~~~~~~~~~~l~~g~iiid~st~~p~~~~~~~~~~~~~gi~~~dapv~Gg~~  126 (162)
T d3cuma2          72 EGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTA  126 (162)
T ss_dssp             HHHHHSTTCHHHHSCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHH
T ss_pred             HHHHhccccccccCCCCCEEEECCCCCHHHHHHHHHHHHHCCCcEEecccccCcc
Confidence            1        23357889999999998886       222 566677777665443

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.45  E-value=0.09  Score=46.42  Aligned_cols=40  Identities=23%  Similarity=0.189  Sum_probs=34.0

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      ++|.|+|| |  -+|+.+|..+++.|.+|++  ++++.+++.++.
T Consensus         5 kkvaViGa-G--~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~   46 (192)
T d1f0ya2           5 KHVTVIGG-G--LMGAGIAQVAAATGHTVVLVDQTEDILAKSKKG   46 (192)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             EEEEEECc-C--HHHHHHHHHHHhCCCcEEEEECChHHHHHHHhh
Confidence            68999999 5  8999999999999999999  777766655444

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.40  E-value=0.076  Score=47.70  Aligned_cols=30  Identities=17%  Similarity=0.161  Sum_probs=28.1

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      -+.|+++|+++  -||+++|+.|+++|.+|.+
T Consensus         2 gK~vlITGas~--GIG~a~a~~l~~~G~~V~~   31 (236)
T d1dhra_           2 ARRVLVYGGRG--ALGSRCVQAFRARNWWVAS   31 (236)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHTTTCEEEE
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEE
Confidence            47899999997  9999999999999999987

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.14  E-value=0.073  Score=49.26  Aligned_cols=30  Identities=20%  Similarity=0.297  Sum_probs=28.2

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +++|+|+|++|  -||+++++.|.++|.+|+.
T Consensus         1 kKKIlVtG~sG--fiG~~lv~~L~~~g~~V~~   30 (312)
T d2b69a1           1 RKRILITGGAG--FVGSHLTDKLMMDGHEVTV   30 (312)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCcCEEEE
Confidence            47899999999  9999999999999999987

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=90.98  E-value=0.15  Score=42.94  Aligned_cols=58  Identities=12%  Similarity=0.157  Sum_probs=43.0

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV  366 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv  366 (474)
                      +|.++|.-   .+|+|+++.|.+.|.++.+  |++++.++++++.+-..      .++.++  +.+++++.
T Consensus         2 kIg~IG~G---~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~------~~~~~~~~~~~dvIil   63 (152)
T d2ahra2           2 KIGIIGVG---KMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY------AMSHQDLIDQVDLVIL   63 (152)
T ss_dssp             EEEEECCS---HHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB------CSSHHHHHHTCSEEEE
T ss_pred             EEEEEecc---HHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceee------echhhhhhhccceeee
Confidence            46788876   9999999999999999999  88999999987753221      224432  66666553

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.93  E-value=0.19  Score=42.11  Aligned_cols=57  Identities=14%  Similarity=0.174  Sum_probs=42.6

Q ss_pred             hHHHHHHhcC-cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 011973          285 LAAAVVVNSL-PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  345 (474)
Q Consensus       285 ltaAvvl~~i-p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~  345 (474)
                      +||+-.++.. ++....|++.|+ |  -||..+++.+...|.+|..  ++++|++..++ ++.+
T Consensus        14 ~Ta~~al~~~~~~~g~~VlV~Ga-G--~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~-~Ga~   73 (166)
T d1llua2          14 VTVYKGLKQTNARPGQWVAISGI-G--GLGHVAVQYARAMGLHVAAIDIDDAKLELARK-LGAS   73 (166)
T ss_dssp             HHHHHHHHHHTCCTTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCS
T ss_pred             HHHHHHHHHhCCCCCCEEEEeec-c--ccHHHHHHHHHHcCCccceecchhhHHHhhhc-cCcc
Confidence            4666666554 345668899887 7  8999999988889999988  88888877654 4443

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=90.92  E-value=0.22  Score=46.18  Aligned_cols=28  Identities=25%  Similarity=0.290  Sum_probs=26.5

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +|+|+|+||  -||+.+++.|.++|.+|..
T Consensus         2 KiLItG~tG--fIG~~l~~~L~~~g~~V~~   29 (338)
T d1udca_           2 RVLVTGGSG--YIGSHTCVQLLQNGHDVII   29 (338)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             EEEEECCCC--HHHHHHHHHHHHCcCEEEE
Confidence            599999999  9999999999999999987

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=90.56  E-value=0.27  Score=42.01  Aligned_cols=56  Identities=13%  Similarity=0.103  Sum_probs=43.4

Q ss_pred             hHHHHHHhcCc--CCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCcc
Q 011973          285 LAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPV  344 (474)
Q Consensus       285 ltaAvvl~~ip--~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~  344 (474)
                      +||+-.++...  +.-+.|++.|| |  -||..+++.+...|. +|..  ++++|++..+ +++.
T Consensus        14 ~ta~~al~~~~~~~~G~~VlV~Ga-G--~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~lGa   74 (182)
T d1vj0a2          14 ATAYHAFDEYPESFAGKTVVIQGA-G--PLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGA   74 (182)
T ss_dssp             HHHHHHHHTCSSCCBTCEEEEECC-S--HHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTC
T ss_pred             HHHHHHHHHHhCCCCCCEEEEECC-C--ccchhheecccccccccccccccccccccccc-cccc
Confidence            57777776664  34578999997 7  899999999999997 6766  8888887664 4444

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=90.56  E-value=0.23  Score=42.45  Aligned_cols=66  Identities=17%  Similarity=0.206  Sum_probs=41.8

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcc-----ccccceeeeccccc-CceeEEEE
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV-----EAQHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~-----~~~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      +++|.++|+ |  .||+++|..|.++++..+.   +++++.+.....+..     +....+.....|++ ++++++|+
T Consensus         3 ~~KI~IIGa-G--~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~advvvi   77 (150)
T d1t2da1           3 KAKIVLVGS-G--MIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIV   77 (150)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEE
T ss_pred             CCeEEEECC-C--HHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCCCcEEEE
Confidence            468999997 7  9999999988888876655   556665554444332     12122112224455 88877664

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=90.35  E-value=0.16  Score=46.22  Aligned_cols=33  Identities=24%  Similarity=0.310  Sum_probs=28.5

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +.+.++|+||.|.+-||+|||+.|+++|-+|.+
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi   39 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILV   39 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEE
Confidence            567899999985224999999999999999999

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=90.19  E-value=0.27  Score=41.02  Aligned_cols=64  Identities=14%  Similarity=0.177  Sum_probs=38.7

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcc-----ccccceeeeccccc-CceeEEEE
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPV-----EAQHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~-----~~~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      +|.++|| |  .||+++|..|..++.  ++.|  .++++.+.....+..     .....+...+.+++ ++++++|+
T Consensus         2 KI~IIGa-G--~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~dadvvvi   75 (142)
T d1guza1           2 KITVIGA-G--NVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVII   75 (142)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEEE
T ss_pred             EEEEECc-C--HHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHHHhcCCeEEEE
Confidence            5899997 8  999999999997764  5666  566655533322211     11122222234455 88877654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=90.18  E-value=0.13  Score=45.36  Aligned_cols=40  Identities=13%  Similarity=0.189  Sum_probs=36.7

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      ++|.|.|+.   ..|.|+|..|++.|.+|++  |+++..+.|+++
T Consensus         8 ~KI~ViGaG---~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~   49 (189)
T d1n1ea2           8 NKAVVFGSG---AFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK   49 (189)
T ss_dssp             EEEEEECCS---HHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH
T ss_pred             ceEEEECCC---HHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc
Confidence            479999998   8999999999999999999  999999999865

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.10  E-value=0.16  Score=44.32  Aligned_cols=100  Identities=17%  Similarity=0.192  Sum_probs=65.9

Q ss_pred             hhHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-c
Q 011973          284 SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-S  355 (474)
Q Consensus       284 sltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t-~  355 (474)
                      .+||+-.++.+     .+....|++.||+|  -||.+..+.....|.+|..  +++++.+.+++ +..+.   .+..+ .
T Consensus        13 glTA~~a~~~L~~~g~~~~g~~VLI~gaaG--GVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-lGa~~---vi~~~~~   86 (176)
T d1xa0a2          13 GFTAALSIHRLEEHGLTPERGPVLVTGATG--GVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LGAKE---VLAREDV   86 (176)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCCEEESSTTS--HHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TTCSE---EEECC--
T ss_pred             HHHHHHHHHHHHHhCCCCCCCEEEEEeccc--hHHHHHHHHHHHcCCceEEecCchHHHHHHHh-cccce---eeecchh
Confidence            37888776654     23456799999999  9999999988899999888  77777776654 44433   23222 1


Q ss_pred             ccc-------CceeEEE--EcCcCChhhhhcCCCCceeecccc
Q 011973          356 YAA-------HKTKIWL--VGDDLTGKEQARAPKGTIFIPYTQ  389 (474)
Q Consensus       356 ~~~-------~~~~vwi--vg~~i~~~eq~~a~~G~~f~~~~~  389 (474)
                      +.+       ...++++  +|...-++.+....+|-+++.+..
T Consensus        87 ~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~  129 (176)
T d1xa0a2          87 MAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGL  129 (176)
T ss_dssp             -------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSC
T ss_pred             HHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeec
Confidence            111       3446665  665566666666666777776663

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.08  E-value=0.1  Score=47.76  Aligned_cols=30  Identities=17%  Similarity=0.170  Sum_probs=28.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ++.|+|+||||  -||+.+++.|-++|.+|.-
T Consensus         1 ~k~~LVTGatG--fiG~~lv~~Ll~~g~~V~~   30 (339)
T d1n7ha_           1 RKIALITGITG--QDGSYLTEFLLGKGYEVHG   30 (339)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEeCCcc--HHHHHHHHHHHHCcCEEEE
Confidence            47899999999  9999999999999999986

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.07  E-value=0.15  Score=47.36  Aligned_cols=27  Identities=19%  Similarity=0.186  Sum_probs=22.5

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      |+++|+++  =||+|+|+.|+++|-++.+
T Consensus         5 vlITGass--GIG~a~A~~la~~Ga~v~~   31 (285)
T d1jtva_           5 VLITGCSS--GIGLHLAVRLASDPSQSFK   31 (285)
T ss_dssp             EEESCCSS--HHHHHHHHHHHTCTTCCEE
T ss_pred             EEEccCCC--HHHHHHHHHHHHCCCCeEE
Confidence            45679996  9999999999999977543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=89.97  E-value=0.2  Score=42.13  Aligned_cols=40  Identities=25%  Similarity=0.258  Sum_probs=32.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhh
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~  341 (474)
                      ++|.++|. |  .+|..+|+.|.+.|.  +|..  +|++.++..++.
T Consensus         2 k~I~IIG~-G--~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~   45 (171)
T d2g5ca2           2 QNVLIVGV-G--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL   45 (171)
T ss_dssp             CEEEEESC-S--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT
T ss_pred             CEEEEEcc-C--HHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHh
Confidence            36899996 6  999999999998885  5554  788888877766

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.95  E-value=0.12  Score=44.63  Aligned_cols=30  Identities=20%  Similarity=0.227  Sum_probs=26.4

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCc--EEEe
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT  329 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l  329 (474)
                      .++|+++||||  -||+.+++.|.++|.  +|..
T Consensus         2 ~KkIlItGatG--~iG~~lv~~L~~~~~~~~v~~   33 (212)
T d2a35a1           2 PKRVLLAGATG--LTGEHLLDRILSEPTLAKVIA   33 (212)
T ss_dssp             CCEEEEECTTS--HHHHHHHHHHHHCTTCCEEEC
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHhCCCeEEEEE
Confidence            36899999999  999999999998886  6665

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=89.90  E-value=0.21  Score=42.08  Aligned_cols=65  Identities=12%  Similarity=0.136  Sum_probs=37.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcc---ccccceeeeccccc-CceeEEEE
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPV---EAQHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~---~~~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      .+|.++|+ |  +||+++|..|..++.  ++.|  +++++.+....++..   -.....+...+|++ ++++++|+
T Consensus         2 ~KI~IIGa-G--~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~adivvi   74 (142)
T d1y6ja1           2 SKVAIIGA-G--FVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVV   74 (142)
T ss_dssp             CCEEEECC-S--HHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEE
T ss_pred             CeEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhCCCceEEE
Confidence            57899998 8  999999999997766  5666  566654433333221   11111122224555 88877663

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.80  E-value=0.16  Score=44.09  Aligned_cols=61  Identities=10%  Similarity=0.095  Sum_probs=47.9

Q ss_pred             hhHHHHHHhcC---cCC-CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcccc
Q 011973          284 SLAAAVVVNSL---PKT-TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEA  346 (474)
Q Consensus       284 sltaAvvl~~i---p~~-~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~~~  346 (474)
                      .+||+..+..+   .++ ...|++.||+|  -||+++++.....|.+++.   +++|+.+.++++++...
T Consensus        13 glTA~~~l~~~~~~~~G~~etVLI~gaaG--gVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2          13 GLTSLIGVQEKGHISAGSNQTMVVSGAAG--ACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             HHHHHHHHHHHSCCCTTSCCEEEESSTTS--TTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             HHHHHHHHHHHhCCCCCCCCEEEEECCCc--hhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            68999988665   333 47899999998  9999999976668876443   67788888888887765

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=89.75  E-value=0.18  Score=44.28  Aligned_cols=81  Identities=15%  Similarity=0.160  Sum_probs=56.0

Q ss_pred             HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973          286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-  358 (474)
Q Consensus       286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-  358 (474)
                      |+..|++=+     +-.-++|+++|...  -+|+-+|.+|.++|..|++ .++.+                    ++++ 
T Consensus        20 Tp~aI~~lL~~y~i~l~GK~v~VIGrS~--~VG~Pla~lL~~~gatVt~~h~~t~--------------------~l~~~   77 (166)
T d1b0aa1          20 TPRGIVTLLERYNIDTFGLNAVVIGASN--IVGRPMSMELLLAGCTTTVTHRFTK--------------------NLRHH   77 (166)
T ss_dssp             HHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHHTTTCEEEEECSSCS--------------------CHHHH
T ss_pred             hHHHHHHHHHHcCcccccceEEEEeccc--cccHHHHHHHHHhhccccccccccc--------------------hhHHH
Confidence            555555443     34678999999997  9999999999999999998 21110                    1111 


Q ss_pred             -CceeEEEEc----CcCChhhhhcCCCCceeecccccCc
Q 011973          359 -HKTKIWLVG----DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       359 -~~~~vwivg----~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                       +++||+|++    ..++++..   ++|++++|+. +.+
T Consensus        78 ~~~ADivI~a~G~p~~i~~~~v---k~g~vvIDvG-i~~  112 (166)
T d1b0aa1          78 VENADLLIVAVGKPGFIPGDWI---KEGAIVIDVG-INR  112 (166)
T ss_dssp             HHHCSEEEECSCCTTCBCTTTS---CTTCEEEECC-CEE
T ss_pred             HhhhhHhhhhccCccccccccc---CCCcEEEecC-cee
Confidence             356677742    34565544   8999999987 554

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.72  E-value=0.12  Score=47.72  Aligned_cols=29  Identities=24%  Similarity=0.304  Sum_probs=26.5

Q ss_pred             cEE-EEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHV-LLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V-~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ++| +|+|+||  =||+.+++.|-++|.+|.-
T Consensus         1 kKI~LVTG~tG--fIG~~l~~~Ll~~g~~V~~   30 (347)
T d1t2aa_           1 RNVALITGITG--QDGSYLAEFLLEKGYEVHG   30 (347)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEecCCc--HHHHHHHHHHHHCcCEEEE
Confidence            467 8999999  9999999999999999985

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=89.22  E-value=0.12  Score=45.20  Aligned_cols=41  Identities=12%  Similarity=0.121  Sum_probs=33.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      +-++|.|+|+ |  -+|+.+|..+++.|++|.+  ++++.+++..+
T Consensus         3 ~I~~vaViGa-G--~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~   45 (186)
T d1wdka3           3 DVKQAAVLGA-G--IMGGGIAYQSASKGTPILMKDINEHGIEQGLA   45 (186)
T ss_dssp             CCSSEEEECC-H--HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH
T ss_pred             CCCEEEEECc-C--HHHHHHHHHHHhCCCeEEEEECCHHHHhhhhh
Confidence            4567999999 5  8999999999999999999  77776665433

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=88.97  E-value=0.41  Score=40.17  Aligned_cols=54  Identities=11%  Similarity=0.113  Sum_probs=41.4

Q ss_pred             hHHHHHHhcCc-CCCcEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHHHHh
Q 011973          285 LAAAVVVNSLP-KTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       285 ltaAvvl~~ip-~~~~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~l~~  340 (474)
                      +||+-.++... +....|++.|++|  -||..+++.+...| .+|..  ++++|++.+++
T Consensus        14 ~Ta~~al~~~~~~~g~~vlV~G~~G--~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~   71 (170)
T d1jvba2          14 ITTYRAVRKASLDPTKTLLVVGAGG--GLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR   71 (170)
T ss_dssp             HHHHHHHHHTTCCTTCEEEEETTTS--HHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCEEEEEeccc--cceeeeeecccccccccccccccchhhHHHHHH
Confidence            45666666654 3456899999998  99999999998777 47766  78888887765

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.82  E-value=0.14  Score=48.32  Aligned_cols=29  Identities=21%  Similarity=0.169  Sum_probs=27.3

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ++|+|+|+||  -||+++++.|.++|.+|..
T Consensus         2 ~kILVTGatG--fiG~~lv~~Ll~~g~~V~~   30 (393)
T d1i24a_           2 SRVMVIGGDG--YCGWATALHLSKKNYEVCI   30 (393)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCcCEEEE
Confidence            5799999999  9999999999999999985

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=88.75  E-value=0.2  Score=44.45  Aligned_cols=88  Identities=10%  Similarity=0.052  Sum_probs=57.2

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEE--------E
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--------V  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--------v  366 (474)
                      ..++|-++|.-   .||+.+|+.|.--|.+|...++..-.....+      .......++++  +.+++++        -
T Consensus        48 ~gktvgIiG~G---~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~------~~~~~~~~l~~ll~~sD~i~~~~plt~~T  118 (193)
T d1mx3a1          48 RGETLGIIGLG---RVGQAVALRAKAFGFNVLFYDPYLSDGVERA------LGLQRVSTLQDLLFHSDCVTLHCGLNEHN  118 (193)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHTTTCEEEEECTTSCTTHHHH------HTCEECSSHHHHHHHCSEEEECCCCCTTC
T ss_pred             eCceEEEeccc---cccccceeeeeccccceeeccCcccccchhh------hccccccchhhccccCCEEEEeecccccc
Confidence            45689999987   9999999999999999998222111111111      11112224433  5555544        2


Q ss_pred             cCcCChhhhhcCCCCceeecccc---cCcc
Q 011973          367 GDDLTGKEQARAPKGTIFIPYTQ---IPPR  393 (474)
Q Consensus       367 g~~i~~~eq~~a~~G~~f~~~~~---v~p~  393 (474)
                      -..++.+.+.+|++|+++|-++|   |+.+
T Consensus       119 ~~li~~~~l~~mk~~a~lIN~sRG~ivde~  148 (193)
T d1mx3a1         119 HHLINDFTVKQMRQGAFLVNTARGGLVDEK  148 (193)
T ss_dssp             TTSBSHHHHTTSCTTEEEEECSCTTSBCHH
T ss_pred             hhhhhHHHHhccCCCCeEEecCCceEEcHH
Confidence            23567778889999999999999   5554

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.60  E-value=0.41  Score=41.17  Aligned_cols=39  Identities=15%  Similarity=0.156  Sum_probs=31.7

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--c--chhhHHHHHhh
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--I--CKDDYEKLKLR  341 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~--~~~~~~~l~~~  341 (474)
                      +|.+.|+-   ..|.|+|..|++.|.+|.+  |  +++..+.+++.
T Consensus         2 kI~ViGaG---~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~   44 (180)
T d1txga2           2 IVSILGAG---AMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAG   44 (180)
T ss_dssp             EEEEESCC---HHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTT
T ss_pred             EEEEECCC---HHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhh
Confidence            58899986   8999999999999999999  5  34446666554

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=88.39  E-value=0.16  Score=44.90  Aligned_cols=28  Identities=14%  Similarity=0.331  Sum_probs=26.7

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +|+|+||||  -||+.+++.|.++|.+|..
T Consensus         3 KIlItGasG--fiG~~l~~~L~~~g~~Vi~   30 (281)
T d1vl0a_           3 KILITGANG--QLGREIQKQLKGKNVEVIP   30 (281)
T ss_dssp             EEEEESTTS--HHHHHHHHHHTTSSEEEEE
T ss_pred             EEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence            599999999  9999999999999999988

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.37  E-value=0.41  Score=40.38  Aligned_cols=53  Identities=11%  Similarity=-0.046  Sum_probs=40.7

Q ss_pred             hHHHHHHhcCc-CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973          285 LAAAVVVNSLP-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  340 (474)
Q Consensus       285 ltaAvvl~~ip-~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~  340 (474)
                      +||+-.++... +..+.|++.|+ |  -||...++++...|.+|..  ++++|++..++
T Consensus        14 ~Ta~~al~~~~~~~g~~vlI~Ga-G--~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~   69 (168)
T d1piwa2          14 LTVYSPLVRNGCGPGKKVGIVGL-G--GIGSMGTLISKAMGAETYVISRSSRKREDAMK   69 (168)
T ss_dssp             HHHHHHHHHTTCSTTCEEEEECC-S--HHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred             HHHHHHHHHhCcCCCCEEEEECC-C--CcchhHHHHhhhccccccccccchhHHHHhhc
Confidence            46666665442 34568999997 7  8999999988889999887  88888887654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=88.33  E-value=0.43  Score=41.72  Aligned_cols=82  Identities=11%  Similarity=0.167  Sum_probs=59.0

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEEE--------c
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------G  367 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv--------g  367 (474)
                      .++|.++|.-   .||+.+|+.|..-|.+|...++..     .+   .. .  ....++++  ++++++++        =
T Consensus        42 gk~vgIiG~G---~IG~~va~~l~~~g~~v~~~d~~~-----~~---~~-~--~~~~~l~ell~~sDiv~~~~pl~~~t~  107 (181)
T d1qp8a1          42 GEKVAVLGLG---EIGTRVGKILAALGAQVRGFSRTP-----KE---GP-W--RFTNSLEEALREARAAVCALPLNKHTR  107 (181)
T ss_dssp             TCEEEEESCS---THHHHHHHHHHHTTCEEEEECSSC-----CC---SS-S--CCBSCSHHHHTTCSEEEECCCCSTTTT
T ss_pred             CceEEEeccc---cccccceeeeeccccccccccccc-----cc---cc-e--eeeechhhhhhccchhhcccccccccc
Confidence            4789999987   899999999999999999933221     01   11 1  11235543  77777653        2


Q ss_pred             CcCChhhhhcCCCCceeecccc---cCcc
Q 011973          368 DDLTGKEQARAPKGTIFIPYTQ---IPPR  393 (474)
Q Consensus       368 ~~i~~~eq~~a~~G~~f~~~~~---v~p~  393 (474)
                      ..|+.+.+.++|+|++||..+|   |+.+
T Consensus       108 ~li~~~~l~~mk~~ailIN~~RG~ivd~~  136 (181)
T d1qp8a1         108 GLVKYQHLALMAEDAVFVNVGRAEVLDRD  136 (181)
T ss_dssp             TCBCHHHHTTSCTTCEEEECSCGGGBCHH
T ss_pred             cccccceeeeccccceEEeccccccccch
Confidence            4678899999999999999998   5554

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=88.05  E-value=0.75  Score=39.96  Aligned_cols=88  Identities=10%  Similarity=0.032  Sum_probs=59.3

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE-----
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-----  366 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv-----  366 (474)
                      -..++|.++|.-   .||+++|+.|..-|.+|..  +........+..       .+....++++  ++++++++     
T Consensus        42 l~~~~vgiiG~G---~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~-------~~~~~~~l~~~l~~sD~v~~~~plt  111 (188)
T d2naca1          42 LEAMHVGTVAAG---RIGLAVLRRLAPFDVHLHYTDRHRLPESVEKEL-------NLTWHATREDMYPVCDVVTLNCPLH  111 (188)
T ss_dssp             CTTCEEEEECCS---HHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHH-------TCEECSSHHHHGGGCSEEEECSCCC
T ss_pred             ccccceeecccc---ccchhhhhhhhccCceEEEEeeccccccccccc-------cccccCCHHHHHHhccchhhccccc
Confidence            357789999976   8999999999999999988  221111111111       1111223332  56666553     


Q ss_pred             ---cCcCChhhhhcCCCCceeecccc---cCcc
Q 011973          367 ---GDDLTGKEQARAPKGTIFIPYTQ---IPPR  393 (474)
Q Consensus       367 ---g~~i~~~eq~~a~~G~~f~~~~~---v~p~  393 (474)
                         -..|+.++...+++|+.||=++|   |+.+
T Consensus       112 ~~T~~li~~~~l~~mk~ga~lIN~aRG~ivd~~  144 (188)
T d2naca1         112 PETEHMINDETLKLFKRGAYIVNTARGKLCDRD  144 (188)
T ss_dssp             TTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHH
T ss_pred             ccchhhhHHHHHHhCCCCCEEEecCchhhhhHH
Confidence               35678899999999999999999   6554

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.86  E-value=0.58  Score=39.04  Aligned_cols=64  Identities=17%  Similarity=0.232  Sum_probs=38.8

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccc---cccceeeeccccc-CceeEEEE
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVE---AQHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~---~~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      +|.++|+ |  .||+++|..|+.++.  ++.|  .++++.+.....+...   .....+...+|++ ++++++|+
T Consensus         2 KI~IIGa-G--~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~~adivvi   73 (140)
T d1a5za1           2 KIGIVGL-G--RVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIV   73 (140)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEE
T ss_pred             EEEEECc-C--HHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHHhcCCCEEEE
Confidence            5889997 7  999999999996654  4555  6666665433332221   1111122335555 78877664

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=87.63  E-value=0.38  Score=42.73  Aligned_cols=85  Identities=12%  Similarity=0.105  Sum_probs=57.5

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEEE--------c
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------G  367 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv--------g  367 (474)
                      .++|.++|--   .||+.+|+.|.--|.+|...++.+-.....+        .....++++  ++++++++        -
T Consensus        43 gk~vgIiG~G---~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~--------~~~~~~l~~~l~~sDii~~~~plt~~T~  111 (197)
T d1j4aa1          43 DQVVGVVGTG---HIGQVFMQIMEGFGAKVITYDIFRNPELEKK--------GYYVDSLDDLYKQADVISLHVPDVPANV  111 (197)
T ss_dssp             GSEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSCCHHHHHT--------TCBCSCHHHHHHHCSEEEECSCCCGGGT
T ss_pred             CCeEEEeccc---ccchhHHHhHhhhcccccccCcccccccccc--------eeeeccccccccccccccccCCcccccc
Confidence            5689999976   9999999999999999988222211111111        011223432  55666442        3


Q ss_pred             CcCChhhhhcCCCCceeecccc---cCcc
Q 011973          368 DDLTGKEQARAPKGTIFIPYTQ---IPPR  393 (474)
Q Consensus       368 ~~i~~~eq~~a~~G~~f~~~~~---v~p~  393 (474)
                      ..|+.+.+..||+|+++|-++|   |+.+
T Consensus       112 ~li~~~~l~~mk~~a~lIN~sRG~ivde~  140 (197)
T d1j4aa1         112 HMINDESIAKMKQDVVIVNVSRGPLVDTD  140 (197)
T ss_dssp             TCBSHHHHHHSCTTEEEEECSCGGGBCHH
T ss_pred             ccccHHHHhhhCCccEEEecCchhhhhhH
Confidence            4678889999999999999998   5554

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=87.37  E-value=0.17  Score=46.54  Aligned_cols=28  Identities=21%  Similarity=0.243  Sum_probs=24.8

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccC-cEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMG-IKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~-v~v~l  329 (474)
                      +|+++|+||  =||+++++.|+++| .+|..
T Consensus         2 KILITG~tG--fiG~~l~~~Ll~~g~~~V~~   30 (342)
T d2blla1           2 RVLILGVNG--FIGNHLTERLLREDHYEVYG   30 (342)
T ss_dssp             EEEEETCSS--HHHHHHHHHHHHSTTCEEEE
T ss_pred             EEEEECCCc--HHHHHHHHHHHHCCCCEEEE
Confidence            599999999  99999999999888 56665

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.32  E-value=0.55  Score=40.92  Aligned_cols=85  Identities=13%  Similarity=0.111  Sum_probs=56.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecc--hhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~--~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------  366 (474)
                      ..++|.++|.-   .||+++|+.|..-|.+|...+  .++-+.. ..       . +...++++  +.+|++++      
T Consensus        43 ~~k~vgiiG~G---~IG~~va~~~~~fg~~v~~~d~~~~~~~~~-~~-------~-~~~~~l~ell~~sDiv~~~~Plt~  110 (184)
T d1ygya1          43 FGKTVGVVGLG---RIGQLVAQRIAAFGAYVVAYDPYVSPARAA-QL-------G-IELLSLDDLLARADFISVHLPKTP  110 (184)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHTTTCEEEEECTTSCHHHHH-HH-------T-CEECCHHHHHHHCSEEEECCCCST
T ss_pred             cceeeeecccc---chhHHHHHHhhhccceEEeecCCCChhHHh-hc-------C-ceeccHHHHHhhCCEEEEcCCCCc
Confidence            45678888854   899999999999999999822  2111111 11       0 12224433  56666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc---cCcc
Q 011973          367 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR  393 (474)
Q Consensus       367 --g~~i~~~eq~~a~~G~~f~~~~~---v~p~  393 (474)
                        -..|+.+++.+|++|+++|-++|   |+.+
T Consensus       111 ~T~~lin~~~l~~mk~~a~lIN~sRG~iVde~  142 (184)
T d1ygya1         111 ETAGLIDKEALAKTKPGVIIVNAARGGLVDEA  142 (184)
T ss_dssp             TTTTCBCHHHHTTSCTTEEEEECSCTTSBCHH
T ss_pred             hhhhhhhHHHHhhhCCCceEEEecchhhhhhH
Confidence              13678899999999999999999   5554

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.24  E-value=0.25  Score=45.87  Aligned_cols=29  Identities=17%  Similarity=0.240  Sum_probs=26.9

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      |-|+|+|+||  -||+.+++.|.++|.+|..
T Consensus         2 K~ILVTGatG--fIG~~lv~~Ll~~g~~V~~   30 (347)
T d1z45a2           2 KIVLVTGGAG--YIGSHTVVELIENGYDCVV   30 (347)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCcCeEEE
Confidence            4689999999  9999999999999999987

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.22  E-value=0.61  Score=40.77  Aligned_cols=82  Identities=21%  Similarity=0.220  Sum_probs=55.5

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-c--chhhHHHHHhhCccccccceeeeccc
Q 011973          285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-I--CKDDYEKLKLRIPVEAQHNLVLSTSY  356 (474)
Q Consensus       285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~--~~~~~~~l~~~~~~~~~~~l~~~t~~  356 (474)
                      =|+..|++=+     +-.-++|.++|...  -||+-+|.+|.++|-.|++ .  .++..+.+                  
T Consensus        21 cTp~aii~lL~~~~i~l~Gk~vvVIGrS~--iVGrPLa~lL~~~gatVt~~~~~t~~l~~~~------------------   80 (170)
T d1a4ia1          21 CTPKGCLELIKETGVPIAGRHAVVVGRSK--IVGAPMHDLLLWNNATVTTCHSKTAHLDEEV------------------   80 (170)
T ss_dssp             HHHHHHHHHHHTTTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTCSSHHHHH------------------
T ss_pred             ChHHHHHHHHHHhCcccccceEEEEecCC--ccchHHHHHHHhccCceEEEecccccHHHHH------------------
Confidence            3666666544     33678999999997  8999999999999999999 1  11111110                  


Q ss_pred             ccCceeEEEE--c--CcCChhhhhcCCCCceeecccccCc
Q 011973          357 AAHKTKIWLV--G--DDLTGKEQARAPKGTIFIPYTQIPP  392 (474)
Q Consensus       357 ~~~~~~vwiv--g--~~i~~~eq~~a~~G~~f~~~~~v~p  392 (474)
                        ++++++|+  |  +.++++.   .++|++++|+. +++
T Consensus        81 --~~aDivi~a~G~~~~i~~~~---vk~g~iviDvg-i~~  114 (170)
T d1a4ia1          81 --NKGDILVVATGQPEMVKGEW---IKPGAIVIDCG-INY  114 (170)
T ss_dssp             --TTCSEEEECCCCTTCBCGGG---SCTTCEEEECC-CBC
T ss_pred             --hhccchhhcccccccccccc---ccCCCeEeccC-ccc
Confidence              35556552  2  3455544   49999999997 443

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=87.02  E-value=0.5  Score=39.93  Aligned_cols=28  Identities=25%  Similarity=0.341  Sum_probs=22.6

Q ss_pred             EEEEeccCCCchhHHHHHHHHh-cc--CcEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLC-QM--GIKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~-~~--~v~v~l  329 (474)
                      +|.++|++|  .||+++|..|+ +.  +-++.|
T Consensus         2 KV~IiGaaG--~VG~~~a~~l~~~~~~~~el~L   32 (145)
T d2cmda1           2 KVAVLGAAG--GIGQALALLLKTQLPSGSELSL   32 (145)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHHSCTTCEEEE
T ss_pred             EEEEEcCCC--hHHHHHHHHHHhCCCCCcEEEE
Confidence            689999998  99999999987 43  345666

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.97  E-value=0.25  Score=45.88  Aligned_cols=31  Identities=19%  Similarity=0.212  Sum_probs=28.7

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ..-+|+|+|++|  =||+.+++.|.++|.+|+.
T Consensus        14 ~nMKILVTGgsG--fIGs~lv~~L~~~g~~V~~   44 (363)
T d2c5aa1          14 ENLKISITGAGG--FIASHIARRLKHEGHYVIA   44 (363)
T ss_dssp             SCCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCcCEEEE
Confidence            456799999999  9999999999999999987

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=86.90  E-value=0.42  Score=42.30  Aligned_cols=84  Identities=13%  Similarity=0.071  Sum_probs=56.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEEE--------c
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------G  367 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv--------g  367 (474)
                      .++|.++|.-   .||+++|+.|.--|.+|...++..        ....... ....++++  +.++++++        -
T Consensus        45 ~ktvgIiG~G---~IG~~va~~l~~fg~~v~~~d~~~--------~~~~~~~-~~~~~l~~l~~~~D~v~~~~plt~~T~  112 (199)
T d1dxya1          45 QQTVGVMGTG---HIGQVAIKLFKGFGAKVIAYDPYP--------MKGDHPD-FDYVSLEDLFKQSDVIDLHVPGIEQNT  112 (199)
T ss_dssp             GSEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSC--------CSSCCTT-CEECCHHHHHHHCSEEEECCCCCGGGT
T ss_pred             ceeeeeeecc---cccccccccccccceeeeccCCcc--------chhhhcc-hhHHHHHHHHHhcccceeeeccccccc
Confidence            5688999976   899999999999999998832210        0001011 11224433  56666542        2


Q ss_pred             CcCChhhhhcCCCCceeecccc---cCcc
Q 011973          368 DDLTGKEQARAPKGTIFIPYTQ---IPPR  393 (474)
Q Consensus       368 ~~i~~~eq~~a~~G~~f~~~~~---v~p~  393 (474)
                      ..|+.+.+.+|++|+.+|-++|   |+.+
T Consensus       113 ~li~~~~l~~mk~~a~lIN~aRG~vvde~  141 (199)
T d1dxya1         113 HIINEAAFNLMKPGAIVINTARPNLIDTQ  141 (199)
T ss_dssp             TSBCHHHHHHSCTTEEEEECSCTTSBCHH
T ss_pred             ccccHHHhhccCCceEEEecccHhhhhhH
Confidence            3578889999999999999998   5544

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.85  E-value=0.2  Score=46.36  Aligned_cols=29  Identities=17%  Similarity=0.226  Sum_probs=26.9

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      ++|+|+|+||  -||+++++.|.++|.+|+.
T Consensus         3 kKILITG~tG--fIGs~lv~~Ll~~g~~V~~   31 (346)
T d1ek6a_           3 EKVLVTGGAG--YIGSHTVLELLEAGYLPVV   31 (346)
T ss_dssp             SEEEEETTTS--HHHHHHHHHHHHTTCCEEE
T ss_pred             CeEEEECCCc--HHHHHHHHHHHHCcCEEEE
Confidence            6899999999  9999999999999998864

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=86.58  E-value=1.1  Score=37.89  Aligned_cols=105  Identities=16%  Similarity=0.092  Sum_probs=65.3

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc-ccccceeeeccc----cc-Cce-eEEE-EcC-
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-EAQHNLVLSTSY----AA-HKT-KIWL-VGD-  368 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~-~~~~~l~~~t~~----~~-~~~-~vwi-vg~-  368 (474)
                      +|-++|--   .+|.++|+.|.+.|.+|..  |++++.+.|+++-.. ....++....+.    .. .++ .+.+ +.. 
T Consensus         3 kIGvIGlG---~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (178)
T d1pgja2           3 DVGVVGLG---VMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAG   79 (178)
T ss_dssp             SEEEECCS---HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCS
T ss_pred             EEEEEeeh---HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCc
Confidence            46778765   9999999999999999999  999999999888332 222222211111    11 222 2222 211 


Q ss_pred             -cCC---hhhhhcCCCCceeecccccCccCC--------CCCeeeecCCcc
Q 011973          369 -DLT---GKEQARAPKGTIFIPYTQIPPRKL--------RKDCFYHSTPAM  407 (474)
Q Consensus       369 -~i~---~~eq~~a~~G~~f~~~~~v~p~~~--------R~dc~y~~~~am  407 (474)
                       .++   .+......+|+++++.+..+|+..        .++..|.+.|..
T Consensus        80 ~~~~~~~~~~~~~~~~~~iii~~st~~~~~~~~~~~~l~~~~~~~ldapv~  130 (178)
T d1pgja2          80 AATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGIS  130 (178)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEE
T ss_pred             chhhhhhhhhhhhccccceecccCccchhHHHHHHHHHhhcceeEeccccc
Confidence             000   234446889999999998777622        255666666544

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=86.21  E-value=0.46  Score=39.35  Aligned_cols=38  Identities=24%  Similarity=0.188  Sum_probs=30.7

Q ss_pred             CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 011973          298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  338 (474)
Q Consensus       298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l  338 (474)
                      +.+|++||..   .+|+.+++.|.++|.++++  .++++..+.
T Consensus         3 knHiII~G~g---~~g~~l~~~L~~~~~~v~vId~d~~~~~~~   42 (153)
T d1id1a_           3 KDHFIVCGHS---ILAINTILQLNQRGQNVTVISNLPEDDIKQ   42 (153)
T ss_dssp             CSCEEEECCS---HHHHHHHHHHHHTTCCEEEEECCCHHHHHH
T ss_pred             CCEEEEECCC---HHHHHHHHHHHHcCCCEEEEeccchhHHHH
Confidence            4579999996   9999999999999999888  565544333

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.19  E-value=0.62  Score=39.11  Aligned_cols=64  Identities=16%  Similarity=0.156  Sum_probs=38.8

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCc-E-EEe--cchhhHHHHHhhCc-----cccccceeeeccccc-CceeEEEE
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGI-K-VAT--ICKDDYEKLKLRIP-----VEAQHNLVLSTSYAA-HKTKIWLV  366 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v-~-v~l--~~~~~~~~l~~~~~-----~~~~~~l~~~t~~~~-~~~~vwiv  366 (474)
                      +|.++|+ |  .||+++|..|..++. . +.|  .++++.+-....+.     ......+...++|++ ++++++|+
T Consensus         2 KI~IIGa-G--~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~~~~adiVvi   75 (142)
T d1ojua1           2 KLGFVGA-G--RVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVV   75 (142)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEEE
T ss_pred             EEEEECc-C--HHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHHhccccEEEE
Confidence            5889997 8  999999999986554 2 444  56666543222221     112122233345666 88877664

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=84.97  E-value=0.57  Score=43.85  Aligned_cols=31  Identities=16%  Similarity=0.222  Sum_probs=25.2

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +-.+|+|+.+.+-||+|||+.|++.|.+|.+
T Consensus         3 kVAlITGaa~s~GIG~aiA~~la~~GA~V~i   33 (329)
T d1uh5a_           3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIF   33 (329)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEE
T ss_pred             cEEEEeCCCCCChHHHHHHHHHHHcCCEEEE
Confidence            4567779653235999999999999999999

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=84.59  E-value=0.38  Score=42.40  Aligned_cols=87  Identities=8%  Similarity=0.105  Sum_probs=57.4

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecc--hhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  366 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~--~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------  366 (474)
                      ..++|-++|.-   .||+.+|+.|.--|.++...+  ...-+.-...       ......++++  +.++++++      
T Consensus        46 ~g~tvgIiG~G---~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~-------~~~~~~~l~~ll~~sD~v~l~~plt~  115 (191)
T d1gdha1          46 DNKTLGIYGFG---SIGQALAKRAQGFDMDIDYFDTHRASSSDEASY-------QATFHDSLDSLLSVSQFFSLNAPSTP  115 (191)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHH-------TCEECSSHHHHHHHCSEEEECCCCCT
T ss_pred             cccceEEeecc---cchHHHHHHHHhhccccccccccccccchhhcc-------cccccCCHHHHHhhCCeEEecCCCCc
Confidence            35688899887   899999999999999998822  1111111111       0111223332  55556553      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc---cCcc
Q 011973          367 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR  393 (474)
Q Consensus       367 --g~~i~~~eq~~a~~G~~f~~~~~---v~p~  393 (474)
                        -..|+.+++..||+|+++|-++|   |+.+
T Consensus       116 ~T~~li~~~~l~~mk~~a~lIN~sRG~ivde~  147 (191)
T d1gdha1         116 ETRYFFNKATIKSLPQGAIVVNTARGDLVDNE  147 (191)
T ss_dssp             TTTTCBSHHHHTTSCTTEEEEECSCGGGBCHH
T ss_pred             hHhheecHHHhhCcCCccEEEecCCccchhhH
Confidence              24678899999999999999999   6644

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=84.16  E-value=0.82  Score=38.06  Aligned_cols=43  Identities=16%  Similarity=0.051  Sum_probs=35.8

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      +....|++.| .|  -||..+++.+...|.+|..  ++++|++..++-
T Consensus        25 ~~g~~vlV~G-~G--~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~   69 (170)
T d1e3ja2          25 QLGTTVLVIG-AG--PIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC   69 (170)
T ss_dssp             CTTCEEEEEC-CS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT
T ss_pred             CCCCEEEEEc-cc--ccchhhHhhHhhhcccccccchHHHHHHHHHHc
Confidence            3456899998 46  8999999999899999888  889998877664

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=83.68  E-value=0.96  Score=38.25  Aligned_cols=53  Identities=17%  Similarity=0.172  Sum_probs=37.9

Q ss_pred             hHHH-HHHhcC-cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHh
Q 011973          285 LAAA-VVVNSL-PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKL  340 (474)
Q Consensus       285 ltaA-vvl~~i-p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~  340 (474)
                      +||+ ++++.. ++....|++.|+ |  -||.++++.+...|.++..   ++++|++..++
T Consensus        14 ~Ta~~a~~~~~~~~~g~~VlI~G~-G--~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~   71 (174)
T d1f8fa2          14 QTGAGACINALKVTPASSFVTWGA-G--AVGLSALLAAKVCGASIIIAVDIVESRLELAKQ   71 (174)
T ss_dssp             HHHHHHHHTTTCCCTTCEEEEESC-S--HHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCCCCEEEEeCC-C--HHHhhhhhcccccccceeeeeccHHHHHHHHHH
Confidence            4555 345544 455678999998 7  8999999988877776554   67777777654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=83.63  E-value=0.8  Score=37.82  Aligned_cols=53  Identities=17%  Similarity=0.161  Sum_probs=38.5

Q ss_pred             HHHHHHhcCc-CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973          286 AAAVVVNSLP-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  341 (474)
Q Consensus       286 taAvvl~~ip-~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~  341 (474)
                      ||+-.++... +....|++.|+ |  .||.++++.+...|.+|..  ++++|++.+++-
T Consensus        15 Ta~~al~~~~~~~g~~vlv~G~-G--~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~   70 (168)
T d1rjwa2          15 TTYKALKVTGAKPGEWVAIYGI-G--GLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL   70 (168)
T ss_dssp             HHHHHHHHHTCCTTCEEEEECC-S--TTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT
T ss_pred             HHHHHHHHhCCCCCCEEEEeec-c--cchhhhhHHHhcCCCeEeccCCCHHHhhhhhhc
Confidence            4444444332 34567777776 7  8999999988899999877  889999888663

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=83.28  E-value=1.1  Score=38.95  Aligned_cols=86  Identities=9%  Similarity=0.136  Sum_probs=58.6

Q ss_pred             CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc------
Q 011973          296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------  367 (474)
Q Consensus       296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg------  367 (474)
                      ...++|.++|..   .||+.+|+.|---|.+|...+..+      ......   .....++++  +.++++++=      
T Consensus        42 l~~~~vgiiG~G---~IG~~va~~l~~fg~~v~~~d~~~------~~~~~~---~~~~~~l~ell~~sDii~i~~plt~~  109 (188)
T d1sc6a1          42 ARGKKLGIIGYG---HIGTQLGILAESLGMYVYFYDIEN------KLPLGN---ATQVQHLSDLLNMSDVVSLHVPENPS  109 (188)
T ss_dssp             STTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSC------CCCCTT---CEECSCHHHHHHHCSEEEECCCSSTT
T ss_pred             ccceEEEEeecc---cchhhhhhhcccccceEeeccccc------cchhhh---hhhhhhHHHHHhhccceeecccCCcc
Confidence            346788888876   899999999999999999933220      001111   122224443  556664421      


Q ss_pred             --CcCChhhhhcCCCCceeecccc---cCcc
Q 011973          368 --DDLTGKEQARAPKGTIFIPYTQ---IPPR  393 (474)
Q Consensus       368 --~~i~~~eq~~a~~G~~f~~~~~---v~p~  393 (474)
                        ..|+.+.+.++|+|+.+|-++|   |+.+
T Consensus       110 T~~li~~~~l~~mk~~a~lIN~aRG~lvde~  140 (188)
T d1sc6a1         110 TKNMMGAKEISLMKPGSLLINASRGTVVDIP  140 (188)
T ss_dssp             TTTCBCHHHHHHSCTTEEEEECSCSSSBCHH
T ss_pred             hhhhccHHHHhhCCCCCEEEEcCcHHhhhhH
Confidence              5678899999999999999999   6555

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.19  E-value=0.99  Score=37.82  Aligned_cols=85  Identities=15%  Similarity=0.174  Sum_probs=52.8

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeec--cccc----------Cce
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYAA----------HKT  361 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~~~----------~~~  361 (474)
                      ....|++.|+ |  -||...++.+...|. +|..  ++++|++..+ +++.+.   ....+  +..+          ..+
T Consensus        26 ~gd~VlI~G~-G--~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~Ga~~---~~~~~~~~~~~~~~~~~~~~g~g~   98 (171)
T d1pl8a2          26 LGHKVLVCGA-G--PIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADL---VLQISKESPQEIARKVEGQLGCKP   98 (171)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSE---EEECSSCCHHHHHHHHHHHHTSCC
T ss_pred             CCCEEEEECC-C--ccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-HhCCcc---cccccccccccccccccccCCCCc
Confidence            4568999998 6  899999999998888 6777  8888888654 555443   12111  1110          234


Q ss_pred             eEEE--EcCcCC-hhhhhcCCCCceeeccc
Q 011973          362 KIWL--VGDDLT-GKEQARAPKGTIFIPYT  388 (474)
Q Consensus       362 ~vwi--vg~~i~-~~eq~~a~~G~~f~~~~  388 (474)
                      +++|  +|..-. +.-+..+.+|-.++-+.
T Consensus        99 Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G  128 (171)
T d1pl8a2          99 EVTIECTGAEASIQAGIYATRSGGTLVLVG  128 (171)
T ss_dssp             SEEEECSCCHHHHHHHHHHSCTTCEEEECS
T ss_pred             eEEEeccCCchhHHHHHHHhcCCCEEEEEe
Confidence            5655  554322 22244566776666666

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=82.92  E-value=0.62  Score=38.37  Aligned_cols=31  Identities=16%  Similarity=0.243  Sum_probs=28.9

Q ss_pred             CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      .-++|.++|.+|  .+|+.+|+.|.+.|.+|..
T Consensus         8 ~~~kI~iIGg~G--~mG~~la~~L~~~G~~V~~   38 (152)
T d2pv7a2           8 DIHKIVIVGGYG--KLGGLFARYLRASGYPISI   38 (152)
T ss_dssp             TCCCEEEETTTS--HHHHHHHHHHHTTTCCEEE
T ss_pred             CCCeEEEEcCCC--HHHHHHHHHHHHcCCCcEe
Confidence            456899999999  9999999999999999999

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=82.81  E-value=1.4  Score=36.79  Aligned_cols=58  Identities=10%  Similarity=0.071  Sum_probs=41.0

Q ss_pred             hHHHHHHhcCc-CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 011973          285 LAAAVVVNSLP-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  346 (474)
Q Consensus       285 ltaAvvl~~ip-~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~  346 (474)
                      +||+-.++... +..+.|++.|+ |  -||.+.++++...|.++..  +++++++.. ++++.+.
T Consensus        17 ~Tay~al~~~~~~~G~~VlI~Ga-G--~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a-~~lGad~   77 (168)
T d1uufa2          17 ITTYSPLRHWQAGPGKKVGVVGI-G--GLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KALGADE   77 (168)
T ss_dssp             HHHHHHHHHTTCCTTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHTCSE
T ss_pred             HHHHHHHHHhCCCCCCEEEEecc-c--hHHHHHHHHhhcccccchhhccchhHHHHH-hccCCcE
Confidence            46666666553 34678999997 7  7999999988888988877  677777654 4444443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=82.72  E-value=0.61  Score=41.07  Aligned_cols=27  Identities=15%  Similarity=0.396  Sum_probs=24.1

Q ss_pred             EEEeccCCCchhHHHHHHHHhccCc-EEEe
Q 011973          301 VLLRGTVTANKVANAVASSLCQMGI-KVAT  329 (474)
Q Consensus       301 V~l~Gatg~~kig~ava~~L~~~~v-~v~l  329 (474)
                      |+|+|++|  =||+.+++.|.++|. +|+.
T Consensus         2 ILITGgsG--fIGs~lv~~L~~~g~~~V~~   29 (307)
T d1eq2a_           2 IIVTGGAG--FIGSNIVKALNDKGITDILV   29 (307)
T ss_dssp             EEEETTTS--HHHHHHHHHHHTTTCCCEEE
T ss_pred             EEEecCcc--HHHHHHHHHHHhCCCCeEEE
Confidence            78999999  999999999999996 5654

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=81.60  E-value=0.47  Score=41.74  Aligned_cols=28  Identities=29%  Similarity=0.381  Sum_probs=25.8

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +|+|+|+||  =||+++++.|.++|..|.+
T Consensus         2 KILItG~tG--fiG~~l~~~L~~~g~~v~~   29 (298)
T d1n2sa_           2 NILLFGKTG--QVGWELQRSLAPVGNLIAL   29 (298)
T ss_dssp             EEEEECTTS--HHHHHHHHHTTTTSEEEEE
T ss_pred             EEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence            589999999  9999999999999987777

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=81.11  E-value=0.37  Score=44.54  Aligned_cols=28  Identities=7%  Similarity=0.129  Sum_probs=24.4

Q ss_pred             cEEEEeccCCCchhHHHHHHHHhccCcEEE
Q 011973          299 AHVLLRGTVTANKVANAVASSLCQMGIKVA  328 (474)
Q Consensus       299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~  328 (474)
                      ++|+|+|+||  =||+.+++.|.++|.+|.
T Consensus         3 mkILVTGgtG--fIGs~lv~~L~~~g~~v~   30 (346)
T d1oc2a_           3 KNIIVTGGAG--FIGSNFVHYVYNNHPDVH   30 (346)
T ss_dssp             SEEEEETTTS--HHHHHHHHHHHHHCTTCE
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCCCCeE
Confidence            5799999999  999999999998875543

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=81.04  E-value=0.75  Score=38.07  Aligned_cols=99  Identities=18%  Similarity=0.194  Sum_probs=55.8

Q ss_pred             EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--EcC--cCC
Q 011973          300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VGD--DLT  371 (474)
Q Consensus       300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg~--~i~  371 (474)
                      +|-++|. |  .+|+++|+.|.+.|.+++.  +++++-..++.+   +.  .+.  .+.+ . +++++++  |-+  ..+
T Consensus         2 kIgiIG~-G--~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~---~~--~~~--~~~~e~~~~~diIi~~v~~~~~~~   71 (152)
T d1i36a2           2 RVGFIGF-G--EVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR---TV--GVT--ETSEEDVYSCPVVISAVTPGVALG   71 (152)
T ss_dssp             EEEEESC-S--HHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH---HH--TCE--ECCHHHHHTSSEEEECSCGGGHHH
T ss_pred             EEEEEcH-H--HHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh---cc--ccc--ccHHHHHhhcCeEEEEecCchHHH
Confidence            4778887 5  9999999999999999988  444433333333   11  111  1222 2 4555544  211  111


Q ss_pred             hhhhhcCCCCceeecccccCccCC-----C-CCeeeecCCccc
Q 011973          372 GKEQARAPKGTIFIPYTQIPPRKL-----R-KDCFYHSTPAMI  408 (474)
Q Consensus       372 ~~eq~~a~~G~~f~~~~~v~p~~~-----R-~dc~y~~~~am~  408 (474)
                      --++...-.|..+++.+-.+|...     + +..-|.+.|.|-
T Consensus        72 ~~~~~~~~~~~~~id~st~~p~~~~~l~~~~~~~~~~d~~v~g  114 (152)
T d1i36a2          72 AARRAGRHVRGIYVDINNISPETVRMASSLIEKGGFVDAAIMG  114 (152)
T ss_dssp             HHHHHHTTCCSEEEECSCCCHHHHHHHHHHCSSSEEEEEEECS
T ss_pred             HHHhhcccCCceeeccCcCCHHHHHHHHHHHhccCCCcccccC
Confidence            112223345778999988777611     1 444566666553

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=80.83  E-value=1  Score=35.55  Aligned_cols=38  Identities=16%  Similarity=0.339  Sum_probs=32.1

Q ss_pred             HHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          286 AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       286 taAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      +.|.-++++|   ++|+++|+.   -||.-+|..|.+.|.+|++
T Consensus        13 ~~~l~~~~~p---~~v~IiGgG---~ig~E~A~~l~~~G~~Vtl   50 (117)
T d1ebda2          13 TGALNLGEVP---KSLVVIGGG---YIGIELGTAYANFGTKVTI   50 (117)
T ss_dssp             HHHHTCSSCC---SEEEEECCS---HHHHHHHHHHHHTTCEEEE
T ss_pred             hHhhChhhcC---CeEEEECCC---ccceeeeeeecccccEEEE
Confidence            4445556666   579999998   8999999999999999999

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=80.29  E-value=0.88  Score=39.58  Aligned_cols=36  Identities=25%  Similarity=0.288  Sum_probs=30.4

Q ss_pred             HhcCcC--CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973          291 VNSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  329 (474)
Q Consensus       291 l~~ip~--~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l  329 (474)
                      -+.++.  ..++|+|+||-   --|.++|..|.++|.+|++
T Consensus        21 ~~~~~~~~~pkkV~IIGaG---~aGLsaA~~L~~~G~~V~v   58 (370)
T d2iida1          21 RNGLKATSNPKHVVIVGAG---MAGLSAAYVLAGAGHQVTV   58 (370)
T ss_dssp             HHCSCCCSSCCEEEEECCB---HHHHHHHHHHHHHTCEEEE
T ss_pred             hcCCCCCCCCCeEEEECCC---HHHHHHHHHHHHCCCCEEE
Confidence            344543  45799999997   7899999999999999999