Citrus Sinensis ID: 011979

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470---
Protein Sequence
MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQFDD
Secondary Structure (PSIPRED)
cccccEEEEEEEccccccHHHHHHHHHHHHccccEEEEEEEccccccccHHccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHccccEEEEEccccHHHHHcccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccEEEccccccEEEccccccEEEcccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHcccccEEEEEcccccccHHHHHHcccEEEEEEcccccccccHHHHHHHHccccEEEEccccccccccccccEEEEcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccEEEEEEEccccccHHHHHHHHHHHHHcccEEEEEEEccccccHHHHccccEEEEEccccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccEHHHHHHHHHHHHHccccEEEEEcccHHHcccccHHHHHHHHHHHHHHccccccccccccccccccccccEEEccccccEEEEcccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHcccccccccccHcHHHHccccccccccEEEEEEcccHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHccccEEEEccccccccccEEEEcccccccEEEEccHHHHHHHccccccEEEccHHHHHHHHHHHHHcccccHHHHHHHHHcHHHHHccccccHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MGRRGRACVVVLgdlgrsprMQYQALSLARQMSLEVDVvayggskphaailehpsihihtmtqwptiprglpkvlKPVLLLLKPLIQFFMLLWFLCVkiaspdvflvqnppsvptLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWgikatvlydqppeffhptsleEKHELFCRLNKilhqplgvqdcvsngmegqkadETIFTSLAGIdvflkpnrpalvvsstswtpdedFGILLEAALMYDRRVAAIlneddstnEEVFLKEIsdgkqylypRLLFIitgkgpdkesYEEKIRRLRLKRVAFRTMWLsaedyplllgsadlgvclhtsssgldlpmkvvdmfgcglpvcaVSYSCIEELVKVDkngllfsssSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQFDD
Flexible Loop (DISEMBL)
mgrrgracvvvlgdlgrsprMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVvsstswtpdeDFGILLEAALMYDRRVAAIlneddstneEVFLKEisdgkqylyPRLLFiitgkgpdkesyeeKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQFDD
Low Complexity Region (SEG)
MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGlpkvlkpvllllkplIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQFDD
Disordered region (IsUnstruct)
******ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI*****
Disordered Region (DISOPRED)
****GRA*VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI*****
Disordered Region (DISEMBL)
MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQFDD
Disordered Region (DISPRO)
***RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQP*******SNG*****ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAI*******************KQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQFDD
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQFDD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	473	2.2.26 [Sep-21-2011]
Q9BT22	464	Chitobiosyldiphosphodolic	yes	no	0.911	0.928	0.425	3e-92
Q5R7A2	464	Chitobiosyldiphosphodolic	yes	no	0.913	0.931	0.422	3e-91
Q921Q3	482	Chitobiosyldiphosphodolic	yes	no	0.915	0.898	0.422	8e-91
P90522	493	Chitobiosyldiphosphodolic	yes	no	0.847	0.813	0.393	3e-80
O13933	424	Chitobiosyldiphosphodolic	yes	no	0.826	0.922	0.376	5e-71
Q6C3K2	463	Chitobiosyldiphosphodolic	yes	no	0.845	0.863	0.366	8e-68
P16661	449	Chitobiosyldiphosphodolic	yes	no	0.849	0.895	0.341	1e-59
Q59Q79	456	Chitobiosyldiphosphodolic	N/A	no	0.822	0.853	0.326	8e-59
Q6CVU2	447	Chitobiosyldiphosphodolic	yes	no	0.824	0.872	0.328	6e-57
Q6FLZ2	450	Chitobiosyldiphosphodolic	yes	no	0.837	0.88	0.331	7e-57

>sp|Q9BT22|ALG1_HUMAN Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Homo sapiens GN=ALG1 PE=1 SV=2

 Score =  339 bits (869), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 201/472 (42%), Positives = 273/472 (57%), Gaps = 41/472 (8%)

Query: 3   RRGRAC----VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI 58
           RRGRA      VVLGD+GRSPRMQY ALSLA      V ++ +  SKPH  +L++  I I
Sbjct: 27  RRGRAARHVVAVVLGDVGRSPRMQYHALSLAMH-GFSVTLLGFCNSKPHDELLQNNRIQI 85

Query: 59  HTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA 118
             +T+  ++  G P+V +     +K ++Q   LLW L  +     +FL QNPP +P++  
Sbjct: 86  VGLTELQSLAVG-PRVFQ---YGVKVVLQAMYLLWKLMWREPGAYIFL-QNPPGLPSIAV 140

Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
             +   L  S  ++DWHN+GY+++ L  G     V + +W EK++G++++  LCVT AM+
Sbjct: 141 CWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAMR 200

Query: 179 HELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238
            +LA NW I+A  +YD+P  FF  T L+ +H LF +L   +H P   +    +  E    
Sbjct: 201 EDLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGS-MHSPFRAR----SEPEDPVT 255

Query: 239 DETIFT---SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 295
           + + FT   + +G+   L+  RPAL+VSSTSWT DEDF ILL A                
Sbjct: 256 ERSAFTERDAGSGLVTRLR-ERPALLVSSTSWTEDEDFSILLAAL--------------- 299

Query: 296 STNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDY 355
               E F +   DG     P L+ +ITGKGP +E Y   I +   + +   T WL AEDY
Sbjct: 300 ----EKFEQLTLDGHNL--PSLVCVITGKGPLREYYSRLIHQKHFQHIQVCTPWLEAEDY 353

Query: 356 PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSS 415
           PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC LPVCAV++ C+ ELVK ++NGL+F  S
Sbjct: 354 PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCCLPVCAVNFKCLHELVKHEENGLVFEDS 413

Query: 416 SELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 467
            ELA QL MLF  FPD +  L + R   L      RW   W +   PL+ + 
Sbjct: 414 EELAAQLQMLFSNFPDPAGKLNQFRK-NLRESQQLRWDESWVQTVLPLVMDT 464

Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 4EC: 2

>sp|Q5R7A2|ALG1_PONAB Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Pongo abelii GN=ALG1 PE=2 SV=1

 Score =  336 bits (861), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 199/471 (42%), Positives = 269/471 (57%), Gaps = 39/471 (8%)

Query: 3   RRGRAC----VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI 58
           RRGR       VVLGD+GRSPRMQY ALSLA      V ++ +  SKPH  +L++  I I
Sbjct: 27  RRGRTARHVVAVVLGDVGRSPRMQYHALSLAMH-GFSVTLLGFCNSKPHDELLQNNRIQI 85

Query: 59  HTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA 118
             +T+  ++  G P+V +     +K + Q   LLW L  +     +FL QNPP +P++  
Sbjct: 86  VGLTELQSLAVG-PRVFQ---YGVKVVFQAMYLLWKLMWREPGAYIFL-QNPPGLPSIAV 140

Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
             +   L  S  ++DWHN+GY+++ L  G     V + +W E+++G++++  LCVT AM+
Sbjct: 141 CWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYERFFGRLSHLNLCVTNAMR 200

Query: 179 HELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238
            +LA+NW I+A  +YD+P  FF  T L+ +H LF +L    H P   +    +  E    
Sbjct: 201 EDLAENWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGGT-HSPFRAR----SEPEDPAT 255

Query: 239 DETIFTSL-AGIDVFLK-PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS 296
           + + FT   AG  +  +   RPAL+VSSTSWT DEDF ILL A                 
Sbjct: 256 ERSAFTERDAGSGLVTRLHERPALLVSSTSWTEDEDFSILLAAL---------------- 299

Query: 297 TNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYP 356
              E F +   DG     P L+ +ITGKGP +E Y   I +   + +   T WL AEDYP
Sbjct: 300 ---EKFEQLTLDGHSL--PSLVCVITGKGPLREYYSHLIHQKHFQHIQVCTPWLEAEDYP 354

Query: 357 LLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS 416
           LLLGSADLGVCLHTSSSGLDLPMKVVDMFGC LPVCAV++ C+ ELVK ++NGL+F  S 
Sbjct: 355 LLLGSADLGVCLHTSSSGLDLPMKVVDMFGCHLPVCAVNFKCLHELVKHEENGLVFEDSE 414

Query: 417 ELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 467
           ELA QL MLF  FPD +  L + R   L      RW   W +   PL+ + 
Sbjct: 415 ELAAQLQMLFSNFPDPAGKLNQFRK-NLRESQQLRWDESWVQTVLPLVMDT 464

Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 2

>sp|Q921Q3|ALG1_MOUSE Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Mus musculus GN=Alg1 PE=2 SV=3

 Score =  334 bits (857), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 197/466 (42%), Positives = 269/466 (57%), Gaps = 33/466 (7%)

Query: 2   GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
           GR     VVVLGD+GRSPRMQY ALSLA Q    V ++ +  SKP   +L++  I I  +
Sbjct: 30  GRARHMVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQNDRIRIVKL 88

Query: 62  TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
           T    +  G P++L+     +K + Q   LLW +     +  +FL QNPP +P +    +
Sbjct: 89  TDLRGLGAG-PRILQ---YGVKVVFQAVYLLWKMMRMDPAAYIFL-QNPPGLPAIAVCWF 143

Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
              +  S  ++DWHN+GY+++ L  G R   V + +W EK++G++++  LCVT AM+ +L
Sbjct: 144 VGCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWYEKFFGRLSHLNLCVTNAMREDL 203

Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGM-EGQKADE 240
           A+NW ++A  LYD+P  FF  T L+ +HELF +L+   H     Q C      + +++  
Sbjct: 204 AENWCVRAVTLYDKPASFFKETPLDLQHELFMKLS---HTYSPFQSCSDPSHPDTERSAF 260

Query: 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 300
           T     +G+   L   RPAL+VSSTSWT DEDF ILL A   ++++    L  D      
Sbjct: 261 TERDCQSGVVRRLH-GRPALLVSSTSWTEDEDFSILLRALEKFEQQA---LTGDS----- 311

Query: 301 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 360
                         P L+ +ITGKGP +E Y   I +  L+ V F T WL AEDYPLLLG
Sbjct: 312 -------------LPSLVCVITGKGPLREHYRHLISQKHLQHVRFCTPWLEAEDYPLLLG 358

Query: 361 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 420
           SADLGVCLH SSSGLDLPMKVVDMFGC LPVCAV++ C+ ELV+  +NGL+F  + ELA 
Sbjct: 359 SADLGVCLHMSSSGLDLPMKVVDMFGCHLPVCAVNFKCLHELVRHGENGLVFKDAEELAA 418

Query: 421 QLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITE 466
           QL MLF  FPD +  L + R    E G   RW   W+    PL+  
Sbjct: 419 QLQMLFSKFPDPAGKLSQFRKKLQESG-QQRWDESWQHTVLPLLAH 463

Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 2

>sp|P90522|ALG1_DICDI Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Dictyostelium discoideum GN=alg1 PE=2 SV=1

 Score =  299 bits (766), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 171/435 (39%), Positives = 245/435 (56%), Gaps = 34/435 (7%)

Query: 5   GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW 64
            R  VVVLGD+GRSPRMQY ++SL++  + +V ++ Y  S+PH  I+ + SI I  +  +
Sbjct: 2   NRVAVVVLGDIGRSPRMQYHSMSLSKLENTKVTLIGYRESEPHPQIVNNDSITIEPLKPF 61

Query: 65  P-TIPRGLPKV------LKPVLLLLKPLIQFFMLLWFLCVKIASP-DVFLVQNPPSVPTL 116
           P ++     K+      + P+L + K L Q   L++ L VK+ SP +  LVQ+PP++PT+
Sbjct: 62  PISMSNSFKKIPLISIFMWPLLAICKVLFQIIQLMYVLLVKVPSPLNTILVQSPPAIPTI 121

Query: 117 VAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSH--FVSIYRWIEKYYGKMANGCLCVT 174
             ++    +R    ++DWHN GYTLL LSL +  +   + + ++IE+Y+ K A   L VT
Sbjct: 122 FVMQIVCWIRGVHLVIDWHNLGYTLLKLSLSKSDNHPIIRLAKFIERYFAKNAYAHLFVT 181

Query: 175 QAMQHELAQNWGIKAT--VLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG 232
             M+ +L ++W +K    V +D+    F   +  E+ E                    N 
Sbjct: 182 NEMKIQLVRDWNLKGKTFVFHDKASPIFKSLTDREQEEFL--------------KTFINK 227

Query: 233 MEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAIL 291
              +  D+    S+        P  + ++++SSTSWT DEDF ILL+A + YD  +   +
Sbjct: 228 YSIKGEDKVYIESVISKKSIRNPKQQTSIIISSTSWTQDEDFSILLDAIVKYD--IEHAI 285

Query: 292 NEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS 351
           N +++  EE       D    L   LLFIITGKGP KE Y+EKI  L LK+    T+WL 
Sbjct: 286 NNNNNKVEEA-----QDESVVLAENLLFIITGKGPQKEYYQEKINSLSLKKSRIITVWLD 340

Query: 352 AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 411
           +EDYP LL   DLGV LH SSSG+DLPMKVVDMFGC LPV A+ + CI ELVKV+ NG L
Sbjct: 341 SEDYPKLLACCDLGVSLHNSSSGIDLPMKVVDMFGCCLPVLAIDFKCIGELVKVNYNGFL 400

Query: 412 FSSSSELADQLLMLF 426
           F  S +L   L  LF
Sbjct: 401 FKDSDQLHQLLNQLF 415

Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 2

>sp|O13933|ALG1_SCHPO Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alg1 PE=3 SV=2

 Score =  268 bits (686), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 176/467 (37%), Positives = 246/467 (52%), Gaps = 76/467 (16%)

Query: 4   RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILE-HPSIHIHTMT 62
           + R  V+VLGD+ RSPRMQY A+S A+ +  +VD++ Y        + E H +I  + + 
Sbjct: 24  KKRIIVLVLGDIARSPRMQYHAVSFAK-LGWKVDLLGYQHPGSSVGLFESHENIRFYPI- 81

Query: 63  QWPTIPRGL-PKVLKPVLLL--LKPLIQFFMLLWFLCVKIASPDVFL-VQNPPSVPTLVA 118
             P++P  L PK     L L  LK L QF  L W L V+   P  FL +QNPP +P    
Sbjct: 82  --PSLPAYLQPKNRLQFLFLGPLKVLHQFLALNWALFVR--KPASFLFIQNPPCIPVFFI 137

Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
            +    LR + FI+DWHNFGY++L+L LG++  FV + +  EKY  + A   L V++ M+
Sbjct: 138 AQCLHILRGTKFIIDWHNFGYSILALKLGKQHTFVKLLKIYEKYMARGAYAHLTVSKRMK 197

Query: 179 HELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237
            ++ Q WG+    V YD+PP  F P   E+K ++                          
Sbjct: 198 -DVLQTWGMNPCYVCYDRPPNHFTPIKNEQKKQM-------------------------- 230

Query: 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 297
                  S+  I     P+   L+++STSWTPDED  IL EA           LNE D T
Sbjct: 231 -------SIKKIPCEYNPSSTKLLITSTSWTPDEDIYILWEA-----------LNEYDKT 272

Query: 298 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357
            +               P+LL +ITGKGP KE + + I++  L +V F   WLS EDYP 
Sbjct: 273 LDT--------------PKLLVLITGKGPMKEEFSQYIKKHPLHKVRFCMPWLSIEDYPQ 318

Query: 358 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 417
           ++  ADLGVCLHTSSSGLDLPMKVVD+FGCG+PV A+SY  I ELV   +NGL+ + S  
Sbjct: 319 VMACADLGVCLHTSSSGLDLPMKVVDLFGCGVPVIALSYPTISELVHDGENGLIVNDSKA 378

Query: 418 LADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI 464
           L+ ++  L       ++ L  L+ G L+     RW  EW +   P++
Sbjct: 379 LSKKMQYLL----THANELNSLKLGALKES-EYRWDDEWNKVIPPIV 420

Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 2

>sp|Q6C3K2|ALG1_YARLI Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ALG1 PE=3 SV=1

 Score =  258 bits (658), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 175/477 (36%), Positives = 242/477 (50%), Gaps = 77/477 (16%)

Query: 3   RRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62
           +R R  V+VLGDLGRSPRM Y A SLAR    +VD+  Y G+KP   IL +  I IH + 
Sbjct: 38  KRKRTIVLVLGDLGRSPRMLYHARSLARS-GHKVDLCGYDGAKPFDEILNNDLIKIHHI- 95

Query: 63  QWPTI--PRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
             P I   R LP V   V  +LK + Q ++L+  L  K+   D  LVQNPPS+PTL  V+
Sbjct: 96  --PLILNTRKLPFV---VFGILKVIRQHWLLISLLY-KLRGADYLLVQNPPSIPTLGVVR 149

Query: 121 WASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
           + +     R+  ++DWHNFGYT+L+L L      V   ++ E ++G  A   LCVT  M 
Sbjct: 150 FYNLFLSTRTKVVLDWHNFGYTILALKLPETHPMVKFAKFYEGFFGGRAFVHLCVTVLMG 209

Query: 179 HELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEG 235
             + + +G+   +   L+D+P   F P S  EK ++     + L+             + 
Sbjct: 210 QAMRKTFGMSGRRIVPLHDRPAFHFKPLSESEKLDVLRDFKETLY-------------DD 256

Query: 236 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 295
             AD  I                  +VSSTS+TPDE+F ILL+A  +YD     +     
Sbjct: 257 MTADHKI------------------IVSSTSYTPDENFNILLDALALYDESKLDL----- 293

Query: 296 STNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDY 355
                              P L  IITGKGP    +  K+ +L+LKRV+ RT WL   DY
Sbjct: 294 -------------------PPLRVIITGKGPMMPEFLAKVEKLQLKRVSIRTAWLEFADY 334

Query: 356 PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSS 415
           P +LG+A LGV LH SSSG DLPMKVVDMFGCG+PV +V Y+ + ELVK + NG+     
Sbjct: 335 PRILGAAHLGVSLHESSSGYDLPMKVVDMFGCGIPVVSVDYAALSELVKTNTNGVAVKGH 394

Query: 416 SELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL--ITEVISQ 470
            E+ +  + LF     +   L  ++ G +    +  W   W +   PL  I E + Q
Sbjct: 395 VEMGNTFMSLF----SNRGKLDNIKRGAMIESRNT-WDQTWVKTVGPLFDIGEYVQQ 446

Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 2

>sp|P16661|ALG1_YEAST Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALG1 PE=1 SV=1

 Score =  230 bits (587), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 159/466 (34%), Positives = 236/466 (50%), Gaps = 64/466 (13%)

Query: 4   RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
           + R  + VLGD+G SPR+ Y A+S ++ +  +V++  Y        I   P+I +H M+ 
Sbjct: 38  KKRIIIFVLGDVGHSPRICYHAISFSK-LGWQVELCGYVEDTLPKIISSDPNITVHHMSN 96

Query: 64  WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTL-VAVKWA 122
                 G   V+  V  +L  ++  F LLW    ++   D  LVQNPPS+P L +AV + 
Sbjct: 97  LKR-KGGGTSVIFMVKKVLFQVLSIFKLLW----ELRGSDYILVQNPPSIPILPIAVLY- 150

Query: 123 SSLRRSAFIVDWHNFGYTLLSLSL-GRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
             L     I+DWHN  Y++L L   G   H  V I   +E  + K A+  L VT+AM+  
Sbjct: 151 -KLTGCKLIIDWHNLAYSILQLKFKGNFYHPLVLISYMVEMIFSKFADYNLTVTEAMRKY 209

Query: 181 LAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237
           L Q++ +   +  VLYD+P   F P + +   +      K L     +++ + +  + +K
Sbjct: 210 LIQSFHLNPKRCAVLYDRPASQFQPLAGDISRQ------KALTTKAFIKNYIRDDFDTEK 263

Query: 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 297
            D+                   ++V+STS+TPDED GILL A  +Y+          DS+
Sbjct: 264 GDK-------------------IIVTSTSFTPDEDIGILLGALKIYENSYVKF----DSS 300

Query: 298 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357
                            P++L  ITGKGP KE Y +++     KR     +WLSAEDYP 
Sbjct: 301 ----------------LPKILCFITGKGPLKEKYMKQVEEYDWKRCQIEFVWLSAEDYPK 344

Query: 358 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 417
           LL   D GV LHTSSSGLDLPMK++DMFG GLPV A++Y  ++ELV+ + NGL F    E
Sbjct: 345 LLQLCDYGVSLHTSSSGLDLPMKILDMFGSGLPVIAMNYPVLDELVQHNVNGLKFVDRRE 404

Query: 418 LADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL 463
           L + L+   K    D+D+ +KL+    +     RW + WE   + L
Sbjct: 405 LHESLIFAMK----DADLYQKLKKNVTQEA-ENRWQSNWERTMRDL 445

Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 2

>sp|Q59Q79|ALG1_CANAL Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ALG1 PE=3 SV=1

 Score =  228 bits (581), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 151/462 (32%), Positives = 234/462 (50%), Gaps = 73/462 (15%)

Query: 2   GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
            +R    + VLGDLG SPRM Y A S ++ +   V++  Y  ++P   I++  +I I  +
Sbjct: 49  NKRKTISIFVLGDLGHSPRMCYHASSFSK-LDYYVNLCGYVETEPSHQIVDDVNIDIIPI 107

Query: 62  TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
                    LP ++  +L +++   + + +LW         D  ++QNPPS+P L+ V  
Sbjct: 108 EAIKNT-NNLPYIMFAILKVVRQCGKIWSILW----DTRGSDYIMIQNPPSIPILLIVIL 162

Query: 122 ASSL--RRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQ 178
             ++  R +  I+DWHN  YT+L+L     +H FV + +  EK  G+ AN  + VT++M+
Sbjct: 163 FKTVFSRETKLIIDWHNLNYTILNLRYNNLNHPFVKLVKLYEKILGQFANLNITVTKSMK 222

Query: 179 HELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEG 235
             L + +G    K   LYD+P   F P  L  K E                      M  
Sbjct: 223 KYLVKEFGFQKSKIVTLYDRPGVQFQP--LSNKREF---------------------MSE 259

Query: 236 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 295
            K  E        ID+     +  +++SSTS+TPDEDF ILL+A          + N ++
Sbjct: 260 HKLFE-------DIDI----EKYKVLISSTSFTPDEDFNILLDA----------LKNYEN 298

Query: 296 STNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAED 354
           + N                P +L I+TGKGP K  + E + +L    +V  ++ WLS+ED
Sbjct: 299 TPNT---------------PPILLIVTGKGPLKGKFLETVDKLEFTNKVCVKSAWLSSED 343

Query: 355 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSS 414
           YP +L  ADLG+ LHTSSSG+DLPMK+VD FGCG+PV ++ +  I+ELVK   NGL+ +S
Sbjct: 344 YPKVLACADLGISLHTSSSGIDLPMKIVDFFGCGVPVVSLDFPAIDELVKNKVNGLITNS 403

Query: 415 SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 456
            S+   ++  L      D  +L+ ++ G LE   ++RW   W
Sbjct: 404 KSDQTKEVARLVTEVFTDDALLRSIKEGALEES-NSRWDENW 444

Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER.

Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 2

>sp|Q6CVU2|ALG1_KLULA Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ALG1 PE=3 SV=1

 Score =  222 bits (565), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 151/459 (32%), Positives = 227/459 (49%), Gaps = 69/459 (15%)

Query: 4   RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
           + R  +VVLGDLG SPR+ Y A S ++    +V++  Y  S     IL+  +I IH + +
Sbjct: 42  KTRILIVVLGDLGHSPRILYHARSFSKA-GFQVELSGYVDSDIPTDILDDDNIEIHGLKK 100

Query: 64  WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS 123
           + +    L K LK  L       Q   + W    K+ + D  L+QNPP++P L       
Sbjct: 101 YGSEKGLLVKALKQGL-------QLCSMFW----KLRAVDYILLQNPPTIPILPIAVVVK 149

Query: 124 SLRRSAFIVDWHNFGYTLLSLSLGRR--SHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
           +  R+  I+DWHN GYT+L +    +     V +   IE  + K AN  L VT+AM+  L
Sbjct: 150 TFSRAKLIIDWHNLGYTILQMKFKDQFLHPLVLLAYLIEWIFAKFANYHLTVTKAMKTYL 209

Query: 182 AQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238
            + +GI   K  VLYD+P + F P    +  E   +           Q+ ++  +  +  
Sbjct: 210 VEKFGIDGKKIAVLYDRPGKQFSPLKEADDREALLK-----------QEFIAKYIPKE-- 256

Query: 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTN 298
                      D+    ++  + V+STS+TPDED  +L+ +  +Y+          D T 
Sbjct: 257 ----------FDI----SKDKIFVTSTSFTPDEDISVLIGSFKIYENSFQKF----DQT- 297

Query: 299 EEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLL 358
                           PR+L  ITGKGP +E   ++++  +  RV    +WLS+EDYP L
Sbjct: 298 ---------------LPRILCFITGKGPLQEKIVKQVQDFKWDRVQVEFLWLSSEDYPKL 342

Query: 359 LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSEL 418
           L   D GV LHTSSSGLDLPMK++DMFG GLPV  ++Y  ++ELV+ + NGL F+   EL
Sbjct: 343 LRLCDYGVSLHTSSSGLDLPMKILDMFGSGLPVICMNYPVLDELVQQNVNGLKFADRREL 402

Query: 419 ADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWE 457
            + L+   K    D  V ++++ G L      RW   WE
Sbjct: 403 HEALIFSVK----DEQVHQEIKRGALRES-KNRWNESWE 436

Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 2

>sp|Q6FLZ2|ALG1_CANGA Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ALG1 PE=3 SV=1

 Score =  221 bits (564), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 156/471 (33%), Positives = 236/471 (50%), Gaps = 75/471 (15%)

Query: 4   RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
           + R  + VLGD+G SPRM Y A S + +   +V++  Y   +    I E P+I +H +  
Sbjct: 40  KKRIIIYVLGDIGHSPRMCYHARSFSEK-GWQVELCGYVEEQVPGFIAEDPNIIVHAL-- 96

Query: 64  WPTI-----PRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTL-V 117
            PT+      R +  ++K VL  +  +I     LW    ++   +  L+QNPPS+P L +
Sbjct: 97  -PTLTLQGNKRSIIFLVKKVLFQVSAIIA---QLW----ELRGSNYMLIQNPPSIPILPI 148

Query: 118 AVKWASSLRRSAFIVDWHNFGYTLLSLSL-GRRSHFVSIYRWIEKY-YGKMANGCLCVTQ 175
           AV +   L     I+DWHN  Y+++ L   G   H V +  ++ +Y +GK A   L VT+
Sbjct: 149 AVFY--RLSGCKLIIDWHNLAYSIMQLKFNGNFYHPVVLASYVIEYIFGKFATYNLTVTE 206

Query: 176 AMQHELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG 232
           AM+  L  ++G+   +  VLYD+P   F P +  E         K+L     ++D +  G
Sbjct: 207 AMKEYLVNSFGLNPKRCVVLYDRPATQFKPLTESESR------TKLLDSEF-IRDMIPEG 259

Query: 233 MEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILN 292
              +K D+                   ++V+STS+TPDED  IL+ A  +YD       N
Sbjct: 260 FNVEKGDK-------------------IIVTSTSFTPDEDISILIGALKIYDNSYE---N 297

Query: 293 EDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSA 352
            D S                  P++L  +TGKGP KE Y + +     + V  + +WL +
Sbjct: 298 LDKSL-----------------PKILCFVTGKGPMKERYVKDVEEHDWQHVYVKFVWLKS 340

Query: 353 EDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 412
           EDYP LL   D GV LH SSSGLDLPMK++DM+G G+PV A +Y  + ELVK ++NGL F
Sbjct: 341 EDYPRLLQLCDYGVSLHKSSSGLDLPMKILDMYGSGIPVIAYNYPVLGELVKYNENGLKF 400

Query: 413 SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL 463
               EL + L+   K    D ++ KKL+ G L+     RW + W+   + L
Sbjct: 401 LDRRELHESLIFAMK----DPELYKKLKQGALKES-QIRWNSSWQSAMQEL 446

Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	473
302142187	484	unnamed protein product [Vitis vinifera]	0.993	0.971	0.799	0.0
388521579	484	unknown [Medicago truncatula]	0.993	0.971	0.784	0.0
225458860	598	PREDICTED: chitobiosyldiphosphodolichol	0.991	0.784	0.796	0.0
356555181	521	PREDICTED: chitobiosyldiphosphodolichol	0.993	0.902	0.779	0.0
357451823	498	Chitobiosyldiphosphodolichol beta-mannos	0.989	0.939	0.781	0.0
224121616	481	predicted protein [Populus trichocarpa]	0.983	0.966	0.791	0.0
255582792	476	beta1,4 mannosyltransferase, putative [R	0.985	0.978	0.777	0.0
449445120	480	PREDICTED: chitobiosyldiphosphodolichol	0.993	0.979	0.751	0.0
297850068	465	predicted protein [Arabidopsis lyrata su	0.980	0.997	0.723	0.0
15219285	465	beta-1,4-mannosyltransferase [Arabidopsi	0.980	0.997	0.720	0.0

>gi|302142187|emb|CBI19390.3| unnamed protein product [Vitis vinifera]

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/473 (79%), Positives = 415/473 (87%), Gaps = 3/473 (0%)

Query: 1   MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
           +GRRGRA VVVLGD+GRSPRMQY ALSLARQ SLEVD+VAYGGS PH+A+LE+PSIHIHT
Sbjct: 9   IGRRGRAAVVVLGDIGRSPRMQYHALSLARQASLEVDIVAYGGSTPHSAVLENPSIHIHT 68

Query: 61  MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
           M QWPTIPR + K+  P++LL K L QFF L WFLCVKI SPDVF+VQNPPSVPTLVAVK
Sbjct: 69  MKQWPTIPRIVSKIFYPLVLLFKALFQFFTLFWFLCVKIPSPDVFIVQNPPSVPTLVAVK 128

Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
           WAS LR SAFIVDWHNFGYTLL LSLGR S FV++Y W EKYYGK ANG LCVT+AMQHE
Sbjct: 129 WASWLRNSAFIVDWHNFGYTLLGLSLGRSSRFVALYHWFEKYYGKAANGSLCVTRAMQHE 188

Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG-ME--GQK 237
           LAQNWGIKATVLYDQPPEFF PT +EEKH+LFCRL+K L  P G QDCV+ G ME   Q 
Sbjct: 189 LAQNWGIKATVLYDQPPEFFRPTPMEEKHKLFCRLHKDLCHPRGGQDCVTAGTMELWNQD 248

Query: 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 297
            DET+FT+    D+FLK NRPALVVSSTSWTPDEDFG+LLEAA+MYDRRVAAILNEDDST
Sbjct: 249 TDETLFTAKMDTDIFLKSNRPALVVSSTSWTPDEDFGMLLEAAVMYDRRVAAILNEDDST 308

Query: 298 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357
            EEV  KE + GKQ+LYPRLLFIITGKGP+KE YEEKIR+L+L RVAFRTMWLSAEDYPL
Sbjct: 309 KEEVLWKETNSGKQFLYPRLLFIITGKGPNKEKYEEKIRQLKLNRVAFRTMWLSAEDYPL 368

Query: 358 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 417
           LLGSADLG+CLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV+KNGLLFSSSSE
Sbjct: 369 LLGSADLGICLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVEKNGLLFSSSSE 428

Query: 418 LADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQ 470
           LA++LLMLFKGFPD+ D LK LRNG +E G SARW TEWE HAKPLI++VIS+
Sbjct: 429 LANELLMLFKGFPDNCDALKLLRNGVVEAGFSARWDTEWERHAKPLISKVISE 481

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388521579|gb|AFK48851.1| unknown [Medicago truncatula]

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/473 (78%), Positives = 418/473 (88%), Gaps = 3/473 (0%)

Query: 2   GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
           GRRGRACVVVLGD+GRSPRMQY ALSL+ Q  LEVD+VAYGGS+PH ++L +PSIHIH M
Sbjct: 12  GRRGRACVVVLGDIGRSPRMQYHALSLSNQAFLEVDIVAYGGSEPHTSLLANPSIHIHLM 71

Query: 62  TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
            QWPT  + LPK+L+P +LLLKPLIQF MLLW+LCVKI SPD+F+VQNPPSVPTLVAVKW
Sbjct: 72  KQWPTARQNLPKILQPFMLLLKPLIQFVMLLWYLCVKIPSPDIFIVQNPPSVPTLVAVKW 131

Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
           AS LR S+F++DWHNFGYTLL +SLGR S FVS+Y+W EK+YGKMA+  LCVT+AMQHEL
Sbjct: 132 ASWLRNSSFVIDWHNFGYTLLGMSLGRNSRFVSLYKWFEKHYGKMADTSLCVTKAMQHEL 191

Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG---MEGQKA 238
           AQNWGI ATVLYDQPP+FFHP SLEE+H+LFCRLN+  + PLGV DCVSNG   M  Q  
Sbjct: 192 AQNWGINATVLYDQPPDFFHPASLEERHKLFCRLNEHFYHPLGVGDCVSNGTSLMSSQIQ 251

Query: 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTN 298
           +ET+FT+ AG +V LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS +
Sbjct: 252 NETLFTTEAGSNVSLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSLD 311

Query: 299 EEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLL 358
           EEV  KEISDGKQ LYPRLLF+ITGKGP+K  YE KI+ L+LKRVAFRTMWLSA+DYPLL
Sbjct: 312 EEVIWKEISDGKQCLYPRLLFVITGKGPEKAKYEAKIKSLKLKRVAFRTMWLSADDYPLL 371

Query: 359 LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSEL 418
           LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI+ELV VDKNGLLFSSSSEL
Sbjct: 372 LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIKELVSVDKNGLLFSSSSEL 431

Query: 419 ADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQF 471
           AD+LL LFKGFP++ D LK L++G L+ G S+RW TEWEEHAKPLITEVIS+F
Sbjct: 432 ADELLTLFKGFPNECDSLKVLKSGALDTGASSRWVTEWEEHAKPLITEVISRF 484

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458860|ref|XP_002283369.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Vitis vinifera]

 Score =  782 bits (2020), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/472 (79%), Positives = 412/472 (87%), Gaps = 3/472 (0%)

Query: 1   MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
           +GRRGRA VVVLGD+GRSPRMQY ALSLARQ SLEVD+VAYGGS PH+A+LE+PSIHIHT
Sbjct: 124 IGRRGRAAVVVLGDIGRSPRMQYHALSLARQASLEVDIVAYGGSTPHSAVLENPSIHIHT 183

Query: 61  MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
           M QWPTIPR + K+  P++LL K L QFF L WFLCVKI SPDVF+VQNPPSVPTLVAVK
Sbjct: 184 MKQWPTIPRIVSKIFYPLVLLFKALFQFFTLFWFLCVKIPSPDVFIVQNPPSVPTLVAVK 243

Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
           WAS LR SAFIVDWHNFGYTLL LSLGR S FV++Y W EKYYGK ANG LCVT+AMQHE
Sbjct: 244 WASWLRNSAFIVDWHNFGYTLLGLSLGRSSRFVALYHWFEKYYGKAANGSLCVTRAMQHE 303

Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG-ME--GQK 237
           LAQNWGIKATVLYDQPPEFF PT +EEKH+LFCRL+K L  P G QDCV+ G ME   Q 
Sbjct: 304 LAQNWGIKATVLYDQPPEFFRPTPMEEKHKLFCRLHKDLCHPRGGQDCVTAGTMELWNQD 363

Query: 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 297
            DET+FT+    D+FLK NRPALVVSSTSWTPDEDFG+LLEAA+MYDRRVAAILNEDDST
Sbjct: 364 TDETLFTAKMDTDIFLKSNRPALVVSSTSWTPDEDFGMLLEAAVMYDRRVAAILNEDDST 423

Query: 298 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357
            EEV  KE + GKQ+LYPRLLFIITGKGP+KE YEEKIR+L+L RVAFRTMWLSAEDYPL
Sbjct: 424 KEEVLWKETNSGKQFLYPRLLFIITGKGPNKEKYEEKIRQLKLNRVAFRTMWLSAEDYPL 483

Query: 358 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 417
           LLGSADLG+CLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV+KNGLLFSSSSE
Sbjct: 484 LLGSADLGICLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVEKNGLLFSSSSE 543

Query: 418 LADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVIS 469
           LA++LLMLFKGFPD+ D LK LRNG +E G SARW TEWE HAKPLI++  S
Sbjct: 544 LANELLMLFKGFPDNCDALKLLRNGVVEAGFSARWDTEWERHAKPLISKASS 595

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555181|ref|XP_003545914.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Glycine max]

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/476 (77%), Positives = 418/476 (87%), Gaps = 6/476 (1%)

Query: 2   GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
           GRRGRACVVVLGD+GRSPRMQY ALSLA Q SLEVD+VAYGGS+PH A+L +PSIHI+ M
Sbjct: 11  GRRGRACVVVLGDIGRSPRMQYHALSLANQASLEVDIVAYGGSEPHTALLANPSIHIYIM 70

Query: 62  TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
            QW T  + LPK+L+P++LLLKPL+QF MLLWFLCVKI SPD+F+VQNPPSVPTLVAVKW
Sbjct: 71  KQWLTASQSLPKILRPIMLLLKPLVQFCMLLWFLCVKIPSPDIFIVQNPPSVPTLVAVKW 130

Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
           AS LR S+F++DWHNFGYTLL+LSLGR SHFVS+Y+W EK+YGKMA+  LCVT+AMQHEL
Sbjct: 131 ASWLRNSSFVIDWHNFGYTLLALSLGRNSHFVSLYKWFEKHYGKMADASLCVTKAMQHEL 190

Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK---- 237
           AQNWGI ATVLYDQPP+ FHP SLEE+H+LFCRLN+ L + LGV+DCVSNG  G      
Sbjct: 191 AQNWGINATVLYDQPPDIFHPASLEERHKLFCRLNEDLFRSLGVRDCVSNGKIGNSLVAS 250

Query: 238 --ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 295
              +ET+F +  G +++LKPNRPALVVSSTSWTPDEDFGILLEAA+MYDRRVAAIL EDD
Sbjct: 251 CHQNETLFATEVGSNIYLKPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAAILGEDD 310

Query: 296 STNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDY 355
           S +EEV  KEISDGKQ LYPRLLFIITGKGP+KE YE KI+R++LKRVAFRTMWLSA+DY
Sbjct: 311 SVDEEVIWKEISDGKQCLYPRLLFIITGKGPEKEKYEVKIKRMKLKRVAFRTMWLSADDY 370

Query: 356 PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSS 415
           PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI ELV+VDKNGLLFSSS
Sbjct: 371 PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIRELVRVDKNGLLFSSS 430

Query: 416 SELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQF 471
           SELAD+LL+LFKGFPDD D LK L+ G LE G S+RWATEWEEHAKPLITE  S F
Sbjct: 431 SELADELLLLFKGFPDDCDALKVLKYGALETGSSSRWATEWEEHAKPLITEASSFF 486

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357451823|ref|XP_003596188.1| Chitobiosyldiphosphodolichol beta-mannosyltransferase [Medicago truncatula] gi|355485236|gb|AES66439.1| Chitobiosyldiphosphodolichol beta-mannosyltransferase [Medicago truncatula]

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/471 (78%), Positives = 414/471 (87%), Gaps = 3/471 (0%)

Query: 2   GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
           GRRGRACVVVLGD+GRSPRMQY ALSL+ Q  LEVD+VAYGGS+PH ++L +PSIHIH M
Sbjct: 12  GRRGRACVVVLGDIGRSPRMQYHALSLSNQAFLEVDIVAYGGSEPHTSLLANPSIHIHLM 71

Query: 62  TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
            QWPT  + LPK+L+P +LLLKPLIQF MLLW+LCVKI SPD+F+VQNPPSVPTLVAVKW
Sbjct: 72  KQWPTARQNLPKILQPFMLLLKPLIQFVMLLWYLCVKIPSPDIFIVQNPPSVPTLVAVKW 131

Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
           AS LR S+F++DWHNFGYTLL +SLGR S FVS+Y+W EK+YGKMA+  LCVT+AMQHEL
Sbjct: 132 ASWLRNSSFVIDWHNFGYTLLGMSLGRNSRFVSLYKWFEKHYGKMADTSLCVTKAMQHEL 191

Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG---MEGQKA 238
           AQNWGI ATVLYDQPP+FFHP SLEE+H+LFCRLN+  + PLGV DCVSNG   M  Q  
Sbjct: 192 AQNWGINATVLYDQPPDFFHPASLEERHKLFCRLNEHFYHPLGVGDCVSNGTSLMSSQIQ 251

Query: 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTN 298
           +ET+FT+ AG +V LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS +
Sbjct: 252 NETLFTTEAGSNVSLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSLD 311

Query: 299 EEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLL 358
           EEV  KEISDGKQ LYPRLLF+ITGKGP+K  YE KI+ L+LKRVAFRTMWLSA+DYPLL
Sbjct: 312 EEVIWKEISDGKQCLYPRLLFVITGKGPEKAKYEAKIKSLKLKRVAFRTMWLSADDYPLL 371

Query: 359 LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSEL 418
           LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI+ELV VDKNGLLFSSSSEL
Sbjct: 372 LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIKELVSVDKNGLLFSSSSEL 431

Query: 419 ADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVIS 469
           AD+LL LFKGFP++ D LK L++G L+ G S+RW TEWEEHAKPLITE  S
Sbjct: 432 ADELLTLFKGFPNECDSLKVLKSGALDTGASSRWVTEWEEHAKPLITEASS 482

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121616|ref|XP_002330745.1| predicted protein [Populus trichocarpa] gi|222872521|gb|EEF09652.1| predicted protein [Populus trichocarpa]

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/470 (79%), Positives = 413/470 (87%), Gaps = 5/470 (1%)

Query: 1   MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
           MG+RGRACVVVLGD+GRSPRMQY ALSLARQ SL+VD+VAYGGS+PH A+ E+ SIHIH 
Sbjct: 1   MGKRGRACVVVLGDIGRSPRMQYHALSLARQASLQVDIVAYGGSEPHMALRENQSIHIHK 60

Query: 61  MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
           M QWP IP+GLPK+ KP +LLLKPL QF MLLW+LCVKI  PDVFLVQNPPSVPTLVAVK
Sbjct: 61  MKQWPAIPQGLPKMFKPFMLLLKPLFQFLMLLWYLCVKIPPPDVFLVQNPPSVPTLVAVK 120

Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
           WAS LR + FIVDWHNFGYTLL+LSLGR S FV++YRW E++YGKMA+G LCVT+AMQHE
Sbjct: 121 WASWLRNAKFIVDWHNFGYTLLALSLGRNSRFVTVYRWFERHYGKMAHGSLCVTRAMQHE 180

Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA-- 238
           L QNWGIKA VLYDQPPEFFHP SLEEKH+LFCRL K + +  GV DC S+G  G  +  
Sbjct: 181 LTQNWGIKAAVLYDQPPEFFHPASLEEKHKLFCRLGKHISESQGVHDCASHGAVGMGSPN 240

Query: 239 -DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 297
            +ET+FT++   D+FLKPNRPALVVSSTSWT DEDFGILLEAA+MYDRRVAAILNEDDST
Sbjct: 241 LNETLFTTMVADDIFLKPNRPALVVSSTSWTADEDFGILLEAAVMYDRRVAAILNEDDST 300

Query: 298 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357
             EV   E+S GK+ LYPRLLFIITGKGP+KE YEEKIRRL LKRVAFRTMWLSAEDYPL
Sbjct: 301 -VEVLWNEMSAGKECLYPRLLFIITGKGPEKEKYEEKIRRLHLKRVAFRTMWLSAEDYPL 359

Query: 358 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 417
           LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV+YSCI+ELVKV+KNGLLFSSSSE
Sbjct: 360 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVAYSCIKELVKVEKNGLLFSSSSE 419

Query: 418 LADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 467
           LAD+LLMLFKGFP++ D LK LRNG LEMG S+RWATEWEEHAKPLI+E 
Sbjct: 420 LADELLMLFKGFPEECDALKLLRNGALEMG-SSRWATEWEEHAKPLISEA 468

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582792|ref|XP_002532170.1| beta1,4 mannosyltransferase, putative [Ricinus communis] gi|223528138|gb|EEF30207.1| beta1,4 mannosyltransferase, putative [Ricinus communis]

 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/467 (77%), Positives = 412/467 (88%), Gaps = 1/467 (0%)

Query: 4   RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
           RGRACVVVLGD+GRSPRMQY ALSLA Q SL+VD+VAYGGS+PH A+L++ SIHIH M Q
Sbjct: 8   RGRACVVVLGDIGRSPRMQYHALSLALQASLQVDIVAYGGSEPHMALLQNQSIHIHKMKQ 67

Query: 64  WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS 123
           WP +P+ LPK+LK ++L+LKPL QFF+LLW LC K+ +PDVF+VQNPPSVPTLVAVKWAS
Sbjct: 68  WPVLPQSLPKLLKALVLVLKPLFQFFVLLWHLCFKVPAPDVFIVQNPPSVPTLVAVKWAS 127

Query: 124 SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ 183
            LR SAFIVDWHNFGYTLL+LSLGR S FV++YRW E++YG+MANG LCVT+AMQHELAQ
Sbjct: 128 WLRNSAFIVDWHNFGYTLLALSLGRNSRFVAVYRWFERHYGRMANGSLCVTKAMQHELAQ 187

Query: 184 NWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIF 243
           NWGI ATVLYDQPPEFF+PTSLEEKH+LFCRL+K + QP  + DC S GM     +ET+F
Sbjct: 188 NWGINATVLYDQPPEFFNPTSLEEKHKLFCRLDKYIIQPGSIHDCASYGMGNHNVNETMF 247

Query: 244 TSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFL 303
           T+    D  LKPNRPALVVSSTSWTPDEDFGILLEAA+MYDRRVAAILNE+DS+ +EV  
Sbjct: 248 TTSVDGDTILKPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAAILNENDSSLDEVLW 307

Query: 304 KEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSAD 363
           KE++ GKQ LYPRLLF+ITGKGP+KE YEEKIRRL LKRVAFRTMWLSAEDYPLLLGSAD
Sbjct: 308 KELTKGKQCLYPRLLFVITGKGPEKEKYEEKIRRLHLKRVAFRTMWLSAEDYPLLLGSAD 367

Query: 364 LGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLL 423
           LGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV+YSCI+ELV+VDKNGLLFSSSSELAD+LL
Sbjct: 368 LGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVAYSCIKELVEVDKNGLLFSSSSELADELL 427

Query: 424 MLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQ 470
           MLFK +PD+ + LK LRNG LE   S+RWATEWE HAKPLITEVIS+
Sbjct: 428 MLFKSYPDECNALKLLRNGALEKS-SSRWATEWEAHAKPLITEVISK 473

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445120|ref|XP_004140321.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Cucumis sativus] gi|449507727|ref|XP_004163113.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Cucumis sativus]

 Score =  734 bits (1896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/474 (75%), Positives = 405/474 (85%), Gaps = 4/474 (0%)

Query: 2   GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
           G+ GRACVVVLGDLGRSPRMQY ALSLARQ +LEVD+VAYGGS+PH+A+LEH SIHIHTM
Sbjct: 9   GKGGRACVVVLGDLGRSPRMQYHALSLARQANLEVDIVAYGGSQPHSALLEHRSIHIHTM 68

Query: 62  TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
           T WP   + LP + +PV LL+KPL+QF MLLWFL V+I SP  F+VQNPPSVPTL+AVKW
Sbjct: 69  TPWPKFLQNLPWIFRPVTLLVKPLVQFLMLLWFL-VRICSPAFFIVQNPPSVPTLIAVKW 127

Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
            S L+RSAFI+DWHNFG+TLL+LSLGR S FV++YRWIEKY+GKMA+   CVT+AMQHEL
Sbjct: 128 VSVLKRSAFIIDWHNFGHTLLALSLGRNSSFVAVYRWIEKYFGKMADDSFCVTKAMQHEL 187

Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS--NGMEGQKAD 239
           A+NW IKATV YDQPPEFFH  SL EKHELF RL+  + QPLG+QDCVS   GM G +  
Sbjct: 188 AENWDIKATVFYDQPPEFFHVASLLEKHELFYRLHSNIIQPLGLQDCVSYGAGMLGHEHQ 247

Query: 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNE 299
           ET  T L G D+FLK NRPA+VVSSTSWTPDEDF ILLEAA+MYDRRVAA+LNEDDS  +
Sbjct: 248 ETFSTRLVGKDIFLKQNRPAVVVSSTSWTPDEDFNILLEAAVMYDRRVAALLNEDDSIPD 307

Query: 300 EVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL 359
           E   KEI D KQ L+PRLLFIITGKGPDK+ YE+KI +L LKRVAFRTMWLSAEDYPLLL
Sbjct: 308 EFVWKEIYDEKQCLFPRLLFIITGKGPDKQEYEDKISKLHLKRVAFRTMWLSAEDYPLLL 367

Query: 360 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELA 419
           GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI ELVKV KNGLLFSSSSELA
Sbjct: 368 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCINELVKVGKNGLLFSSSSELA 427

Query: 420 DQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQFDD 473
           D+LLMLF+GFP++ + L  L+  T+EMG S RW+TEWEEHAKPLI++VI+Q+ D
Sbjct: 428 DELLMLFRGFPNECNDLHSLKKSTVEMG-SRRWSTEWEEHAKPLISQVITQYQD 480

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297850068|ref|XP_002892915.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297338757|gb|EFH69174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  702 bits (1812), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/473 (72%), Positives = 390/473 (82%), Gaps = 9/473 (1%)

Query: 1   MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
           MG+RGRACVVVLGDLGRSPRMQY ALSLARQ S +VD+VAYGGS PH A+L HPSIHIHT
Sbjct: 1   MGKRGRACVVVLGDLGRSPRMQYHALSLARQASFQVDIVAYGGSIPHEAVLNHPSIHIHT 60

Query: 61  MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
           M Q P   +  PK+L PV LLLK  IQF MLLWFL VK+ +PD+FLVQNPPSVPTL+AVK
Sbjct: 61  MAQ-PRFLQLFPKILYPVTLLLKAFIQFTMLLWFLFVKVPAPDIFLVQNPPSVPTLIAVK 119

Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
           WASS RR+AF+VDWHNFGYTLL+LSLGR + FVS+YRW E +YGKMA G LCVT+AMQHE
Sbjct: 120 WASSWRRAAFVVDWHNFGYTLLALSLGRNNLFVSLYRWFENHYGKMATGSLCVTKAMQHE 179

Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240
           L QNWG++A VLYDQPPEFF P  LEE+HELFCR+ K L  P+GV D +S  +E Q+ +E
Sbjct: 180 LDQNWGVRAQVLYDQPPEFFRPALLEERHELFCRVKKDLCHPIGVYDIISIELENQELNE 239

Query: 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 300
           T+FT+    D+ LK NRPALVVSSTSWTPDE+FGILLEAA+MYDRRVAA     ++    
Sbjct: 240 TLFTTKINTDISLKQNRPALVVSSTSWTPDENFGILLEAAVMYDRRVAARSKGSETA--- 296

Query: 301 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 360
               EIS+  Q+LYP LLFIITGKGP+KE YE KI+RL L+ VAFRTMWL+AEDYPLLLG
Sbjct: 297 ----EISE-DQHLYPNLLFIITGKGPEKEMYEGKIKRLNLRHVAFRTMWLAAEDYPLLLG 351

Query: 361 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 420
           SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC+VSYSCI+ELVK  KNGLLFSSSSELAD
Sbjct: 352 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCSVSYSCIQELVKDGKNGLLFSSSSELAD 411

Query: 421 QLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQFDD 473
           QLL+LFKGFP + D L  L+ G +E G S RWATEWE+ AKPLIT+V+SQ  D
Sbjct: 412 QLLILFKGFPGNCDALMSLKAGAMETGSSGRWATEWEDCAKPLITQVVSQIAD 464

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15219285|ref|NP_173105.1| beta-1,4-mannosyltransferase [Arabidopsis thaliana] gi|22136000|gb|AAM91582.1| unknown protein [Arabidopsis thaliana] gi|31376395|gb|AAP49524.1| At1g16570 [Arabidopsis thaliana] gi|332191351|gb|AEE29472.1| beta-1,4-mannosyltransferase [Arabidopsis thaliana]

 Score =  700 bits (1807), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/473 (72%), Positives = 390/473 (82%), Gaps = 9/473 (1%)

Query: 1   MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
           MG+RGRACVVVLGDLGRSPRMQY ALSLARQ S +VD+VAYGGS PH A+L HPSIHIHT
Sbjct: 1   MGKRGRACVVVLGDLGRSPRMQYHALSLARQASFQVDIVAYGGSIPHEAVLNHPSIHIHT 60

Query: 61  MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
           M Q P   +  PK+L PV LLLK  IQF MLLWFL VK+ +PD+FLVQNPPSVPTL+AVK
Sbjct: 61  MAQ-PRFIQYFPKILYPVTLLLKAFIQFTMLLWFLFVKVPAPDIFLVQNPPSVPTLIAVK 119

Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
           WASS RR+AF+VDWHNFGYTLL+LSLGR +  VS+YRW E +YGKMA G LCVT+AMQHE
Sbjct: 120 WASSWRRAAFVVDWHNFGYTLLALSLGRNNLLVSLYRWSENHYGKMATGSLCVTKAMQHE 179

Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240
           L QNWG++A VLYDQPPEFF P  LEE+HELFCR+ K L  P+GV D +S  +E Q+ +E
Sbjct: 180 LDQNWGVRAKVLYDQPPEFFRPALLEERHELFCRVRKDLCHPIGVYDFISRELENQELNE 239

Query: 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 300
           T+FT+    D+ LK NRPALVVSSTSWTPDE+FGILLEAA+MYDRRVAA     ++    
Sbjct: 240 TLFTTKFNADISLKQNRPALVVSSTSWTPDENFGILLEAAVMYDRRVAARSKGSETA--- 296

Query: 301 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 360
               EIS+ +Q+ YP LLFIITGKGP+KE YEEKI+RL L+ VAFRTMWL+AEDYPLLLG
Sbjct: 297 ----EISE-EQHHYPNLLFIITGKGPEKEMYEEKIKRLNLRHVAFRTMWLAAEDYPLLLG 351

Query: 361 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 420
           SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC+VSYSCI+ELVK  KNGLLFSSSSELAD
Sbjct: 352 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCSVSYSCIQELVKDGKNGLLFSSSSELAD 411

Query: 421 QLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQFDD 473
           QLL+LFKGFP + D L  L+ G +E G S RWATEWE+ AKPLIT+V+SQ  D
Sbjct: 412 QLLILFKGFPGNCDALMSLKAGAMETGSSGRWATEWEDCAKPLITQVVSQIAD 464

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	473
TAIR|locus:2017963	496	AT1G16570 [Arabidopsis thalian	0.887	0.846	0.710	6.6e-175
ZFIN|ZDB-GENE-030131-6093	488	alg1 "asparagine-linked glycos	0.564	0.547	0.404	1.4e-93
UNIPROTKB|E1BRK4	462	ALG1 "Uncharacterized protein"	0.577	0.590	0.394	8e-91
UNIPROTKB|Q9BT22	464	ALG1 "Chitobiosyldiphosphodoli	0.572	0.584	0.386	1.7e-88
MGI|MGI:2384774	482	Alg1 "asparagine-linked glycos	0.579	0.568	0.383	3.5e-88
FB|FBgn0038552	446	CG18012 [Drosophila melanogast	0.581	0.616	0.395	5.6e-88
UNIPROTKB|F1N2J7	464	ALG1 "Uncharacterized protein"	0.577	0.588	0.398	7.2e-88
RGD|1310700	481	Alg1 "ALG1, chitobiosyldiphosp	0.579	0.569	0.383	2.4e-87
UNIPROTKB|D4A5S6	465	Alg1 "Protein Alg1" [Rattus no	0.579	0.589	0.383	2.4e-87
UNIPROTKB|F1RKX2	468	LOC100524193 "Uncharacterized	0.581	0.587	0.379	1e-86

TAIR|locus:2017963 AT1G16570 [Arabidopsis thaliana (taxid:3702)]

 Score = 1557 (553.2 bits), Expect = 6.6e-175, Sum P(2) = 6.6e-175
 Identities = 305/429 (71%), Positives = 345/429 (80%)

Query:     1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
             MG+RGRACVVVLGDLGRSPRMQY ALSLARQ S +VD+VAYGGS PH A+L HPSIHIHT
Sbjct:     1 MGKRGRACVVVLGDLGRSPRMQYHALSLARQASFQVDIVAYGGSIPHEAVLNHPSIHIHT 60

Query:    61 MTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
             M Q P   +                IQF MLLWFL VK+ +PD+FLVQNPPSVPTL+AVK
Sbjct:    61 MAQ-PRFIQYFPKILYPVTLLLKAFIQFTMLLWFLFVKVPAPDIFLVQNPPSVPTLIAVK 119

Query:   121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
             WASS RR+AF+VDWHNFGYTLL+LSLGR +  VS+YRW E +YGKMA G LCVT+AMQHE
Sbjct:   120 WASSWRRAAFVVDWHNFGYTLLALSLGRNNLLVSLYRWSENHYGKMATGSLCVTKAMQHE 179

Query:   181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240
             L QNWG++A VLYDQPPEFF P  LEE+HELFCR+ K L  P+GV D +S  +E Q+ +E
Sbjct:   180 LDQNWGVRAKVLYDQPPEFFRPALLEERHELFCRVRKDLCHPIGVYDFISRELENQELNE 239

Query:   241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 300
             T+FT+    D+ LK NRPALVVSSTSWTPDE+FGILLEAA+MYDRRVAA      S   E
Sbjct:   240 TLFTTKFNADISLKQNRPALVVSSTSWTPDENFGILLEAAVMYDRRVAA-----RSKGSE 294

Query:   301 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 360
                 EIS+ +Q+ YP LLFIITGKGP+KE YEEKI+RL L+ VAFRTMWL+AEDYPLLLG
Sbjct:   295 T--AEISE-EQHHYPNLLFIITGKGPEKEMYEEKIKRLNLRHVAFRTMWLAAEDYPLLLG 351

Query:   361 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 420
             SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC+VSYSCI+ELVK  KNGLLFSSSSELAD
Sbjct:   352 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCSVSYSCIQELVKDGKNGLLFSSSSELAD 411

Query:   421 QLLMLFKGF 429
             QLL+    F
Sbjct:   412 QLLVSNSSF 420

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0046520 "sphingoid biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

ZFIN|ZDB-GENE-030131-6093 alg1 "asparagine-linked glycosylation 1 homolog (yeast, beta-1,4-mannosyltransferase)" [Danio rerio (taxid:7955)]

 Score = 512 (185.3 bits), Expect = 1.4e-93, Sum P(2) = 1.4e-93
 Identities = 115/284 (40%), Positives = 165/284 (58%)

Query:     8 CVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTI 67
             CV+VLGD+GRSPRMQY ALSL++     V ++ + G+KPH  ILE   I I  +++    
Sbjct:    58 CVLVLGDIGRSPRMQYHALSLSKH-GYNVTIIGFLGTKPHQDILEDDRIDILPISEL--- 113

Query:    68 PRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW-ASSLR 126
              +G               +Q F LL+ L + I      L+QNPP +P  +AV W AS +R
Sbjct:   114 -KGLTVGPRIFRYISKVTLQSFQLLYVL-MTIEDQGYILMQNPPGLPA-IAVTWMASRIR 170

Query:   127 RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWG 186
              + FI+DWHN+GYT+++LS G     V + +W EK +G +++  LCVT AM+ +L +NW 
Sbjct:   171 GNQFIIDWHNYGYTIMALSHGENHLIVRLAKWYEKIFGCLSDHNLCVTSAMREDLCKNWN 230

Query:   187 IKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFT-- 244
             I+AT LYD+PP  F  T L+ +HELF R+    + P      V+     +  + T FT  
Sbjct:   231 IEATTLYDKPPSIFRETPLKLQHELFVRMGSA-YLPFRPSSAVTK----EYMELTAFTER 285

Query:   245 -SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRV 287
              +  G  V     RPAL++SSTSWT DEDF +LL+A   Y++ V
Sbjct:   286 NTQTGA-VTRSAGRPALLISSTSWTEDEDFSVLLQALEEYEKFV 328

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|E1BRK4 ALG1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 479 (173.7 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
 Identities = 112/284 (39%), Positives = 163/284 (57%)

Query:     5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW 64
             GR CV VLGDLGRSPRMQY ALSLAR     V ++ Y  ++PH  +L    I +  +++ 
Sbjct:    30 GRVCVAVLGDLGRSPRMQYHALSLARH-GRGVALLGYFQTRPHRDVLSSGEIRVVPLSEL 88

Query:    65 PTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASS 124
               +  G                Q   LL+ + +++  P   L+QNPP +P+ +AV W + 
Sbjct:    89 RCLRVGPKLFQYVVKVVA----QTVQLLYTM-LRMDPPSYVLLQNPPGLPS-IAVAWVAC 142

Query:   125 LR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ 183
             L  RS  I+DWHN+GYT++SL+ GR    V I +W EK +G++++  LCVT AM+ +L  
Sbjct:   143 LFWRSKLIIDWHNYGYTIMSLNHGRNHPLVLIAKWYEKLFGRLSDYNLCVTDAMKEDLWV 202

Query:   184 NWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIF 243
             N  IKA  LYD+P  +F  T LE +H+L+ +L K  ++P       S     +++  T  
Sbjct:   203 NCNIKAVTLYDRPASYFKETPLELQHQLYLKLAKD-YEPFKPHT-ESVSWNAERSAFTER 260

Query:   244 TSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRV 287
                +G DV     RPAL++SSTSWT DEDF +LL+A   Y++ V
Sbjct:   261 DEKSG-DVIKSRGRPALLISSTSWTEDEDFSVLLKALEDYEQYV 303

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

UNIPROTKB|Q9BT22 ALG1 "Chitobiosyldiphosphodolichol beta-mannosyltransferase" [Homo sapiens (taxid:9606)]

 Score = 469 (170.2 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
 Identities = 112/290 (38%), Positives = 162/290 (55%)

Query:     3 RRGRAC----VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI 58
             RRGRA      VVLGD+GRSPRMQY ALSLA      V ++ +  SKPH  +L++  I I
Sbjct:    27 RRGRAARHVVAVVLGDVGRSPRMQYHALSLAMH-GFSVTLLGFCNSKPHDELLQNNRIQI 85

Query:    59 HTMTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA 118
               +T+  ++  G               +Q   LLW L  +     +FL QNPP +P+ +A
Sbjct:    86 VGLTELQSLAVGPRVFQYGVKVV----LQAMYLLWKLMWREPGAYIFL-QNPPGLPS-IA 139

Query:   119 VKW-ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177
             V W    L  S  ++DWHN+GY+++ L  G     V + +W EK++G++++  LCVT AM
Sbjct:   140 VCWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAM 199

Query:   178 QHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237
             + +LA NW I+A  +YD+P  FF  T L+ +H LF +L   +H P   +    +  E   
Sbjct:   200 REDLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGS-MHSPFRAR----SEPEDPV 254

Query:   238 ADETIFTSL-AGIDVFLK-PNRPALVVSSTSWTPDEDFGILLEAALMYDR 285
              + + FT   AG  +  +   RPAL+VSSTSWT DEDF ILL A   +++
Sbjct:   255 TERSAFTERDAGSGLVTRLRERPALLVSSTSWTEDEDFSILLAALEKFEQ 304

GO:0016021 "integral to membrane" evidence=IEA

GO:0004578 "chitobiosyldiphosphodolichol beta-mannosyltransferase activity" evidence=IEA

GO:0000030 "mannosyltransferase activity" evidence=TAS

GO:0006486 "protein glycosylation" evidence=TAS

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=TAS

GO:0005783 "endoplasmic reticulum" evidence=TAS

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=TAS

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

MGI|MGI:2384774 Alg1 "asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase)" [Mus musculus (taxid:10090)]

 Score = 465 (168.7 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
 Identities = 110/287 (38%), Positives = 161/287 (56%)

Query:     2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
             GR     VVVLGD+GRSPRMQY ALSLA Q    V ++ +  SKP   +L++  I I  +
Sbjct:    30 GRARHMVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQNDRIRIVKL 88

Query:    62 TQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
             T      RG                Q   LLW +     +  +FL QNPP +P  +AV W
Sbjct:    89 TDL----RGLGAGPRILQYGVKVVFQAVYLLWKMMRMDPAAYIFL-QNPPGLPA-IAVCW 142

Query:   122 -ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
                 +  S  ++DWHN+GY+++ L  G R   V + +W EK++G++++  LCVT AM+ +
Sbjct:   143 FVGCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWYEKFFGRLSHLNLCVTNAMRED 202

Query:   181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS-NGMEGQKAD 239
             LA+NW ++A  LYD+P  FF  T L+ +HELF +L+   + P   Q C   +  + +++ 
Sbjct:   203 LAENWCVRAVTLYDKPASFFKETPLDLQHELFMKLSHT-YSPF--QSCSDPSHPDTERSA 259

Query:   240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 286
              T     +G+ V     RPAL+VSSTSWT DEDF ILL A   ++++
Sbjct:   260 FTERDCQSGV-VRRLHGRPALLVSSTSWTEDEDFSILLRALEKFEQQ 305

GO:0003674 "molecular_function" evidence=ND

GO:0004578 "chitobiosyldiphosphodolichol beta-mannosyltransferase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

FB|FBgn0038552 CG18012 [Drosophila melanogaster (taxid:7227)]

 Score = 502 (181.8 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
 Identities = 115/291 (39%), Positives = 160/291 (54%)

Query:     3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62
             ++  ACV+VLGD+GRSPRMQY A SL  + +  VD++ Y  ++P   + +HP   IH +T
Sbjct:     7 KKRNACVIVLGDIGRSPRMQYHAQSLLEE-NYHVDMIGYLETRPLEELTQHPRCRIHELT 65

Query:    63 QWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWA 122
               P                     Q   LL  L + I  P   LVQNPP +PTL+     
Sbjct:    66 AVPV-----TNLTPKLRLLFKAFWQTLSLLMAL-ISIGRPSFLLVQNPPGIPTLIVCYLY 119

Query:   123 SSLRRSAFIVDWHNFGYTLLSLSL--GRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
              ++ R+   +DWHN+ YT+L+L +  G +S  + + R +E+Y+G  A+   CVT+AMQ +
Sbjct:   120 CAVTRTKLAIDWHNYTYTVLALGMSKGEQSPLIRLVRRLERYFGSKAHTHFCVTRAMQED 179

Query:   181 LAQNWGI-KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKAD 239
             L QNWGI    VLYD+ P  FHP  L  KHEL+ +L K   Q    +D   + +     +
Sbjct:   180 LQQNWGIGPVKVLYDRAPAQFHPIDLTHKHELYLKLAKDYPQ-FQAKDAEQSDV----LE 234

Query:   240 ETIFTS-LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAA 289
              T  T  LA   V  +P R A++VSSTSWTPDEDFGILL+A   Y+    A
Sbjct:   235 ATALTQKLASGVVQYRPQRQAVLVSSTSWTPDEDFGILLKALQAYEETAQA 285

GO:0006486 "protein glycosylation" evidence=ISS

GO:0019187 "beta-1,4-mannosyltransferase activity" evidence=ISS

UNIPROTKB|F1N2J7 ALG1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 476 (172.6 bits), Expect = 7.2e-88, Sum P(2) = 7.2e-88
 Identities = 116/291 (39%), Positives = 164/291 (56%)

Query:     2 GRRGR-ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
             GR  R   VVVLGD+GRSPRMQY ALSLA+     V ++ +  SKPH  +L+   I I  
Sbjct:    29 GRTARHVIVVVLGDVGRSPRMQYHALSLAKS-GFSVTLLGFCNSKPHDELLQSDKIQIVG 87

Query:    61 MTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLW-FLCVKIASPDVFLVQNPPSVPTLVAV 119
             +T    +  G                Q   LLW  +C + A+  +FL QNPP +P +V  
Sbjct:    88 LTDLQRLAVGPHVLQYGVKVV----FQAVHLLWKLMCTEPAAY-IFL-QNPPGLPAIVVC 141

Query:   120 KWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179
              +A  LR S  +VDWHN+GY+++ L  G     V + +W EK  G++++  LCVT AM+ 
Sbjct:   142 WFAGCLRGSKLVVDWHNYGYSIMGLVHGPSHPLVLLAKWYEKLCGRLSHLNLCVTNAMRD 201

Query:   180 ELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKAD 239
             +LA+NWGIKA  +YD+P  FF  T L+ +H+LF +L+     P+  + C  +   G   +
Sbjct:   202 DLAENWGIKAVTVYDKPASFFKETPLDLQHQLFVKLSHTY--PV-FRACSESSDPG--TE 256

Query:   240 ETIFT---SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRV 287
              + FT   +L+G    L   RPAL+VSSTSWT DEDF ILL A   ++  +
Sbjct:   257 RSAFTERDALSGAVTHLC-GRPALLVSSTSWTEDEDFSILLAALEKFEHLI 306

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

RGD|1310700 Alg1 "ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase" [Rattus norvegicus (taxid:10116)]

 Score = 463 (168.0 bits), Expect = 2.4e-87, Sum P(2) = 2.4e-87
 Identities = 110/287 (38%), Positives = 161/287 (56%)

Query:     2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
             GR     VVVLGD+GRSPRMQY ALSLA Q    V ++ +  SKP   +L+   I I  +
Sbjct:    30 GRARHVVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQSDRIQIVKL 88

Query:    62 TQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
             T      RG                Q   LLW +     +  +FL QNPP +P  +AV W
Sbjct:    89 TDL----RGLGAGPRILQYGVKVVFQAVYLLWKMMRTDPAAYIFL-QNPPGLPA-IAVCW 142

Query:   122 -ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
                 +  S  ++DWHN+GY+++ L  G R   V + +W EK++G++++  LCVT AM+ +
Sbjct:   143 FVCCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWYEKFFGRLSHLNLCVTHAMRED 202

Query:   181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS-NGMEGQKAD 239
             LA+NW ++A  LYD+P  FF  T L+ +HELF +L++  + P   Q C   +  + +++ 
Sbjct:   203 LAENWCLRAVTLYDKPASFFKETPLDLQHELFMKLSRT-YSPF--QSCSEPSDPDTERSA 259

Query:   240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 286
              T   S + + V     RPAL+VSSTSWT DEDF ILL A   ++++
Sbjct:   260 FTERDSQSRV-VRRLHGRPALLVSSTSWTEDEDFSILLRALEKFEQQ 305

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

UNIPROTKB|D4A5S6 Alg1 "Protein Alg1" [Rattus norvegicus (taxid:10116)]

 Score = 463 (168.0 bits), Expect = 2.4e-87, Sum P(2) = 2.4e-87
 Identities = 110/287 (38%), Positives = 161/287 (56%)

Query:     2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
             GR     VVVLGD+GRSPRMQY ALSLA Q    V ++ +  SKP   +L+   I I  +
Sbjct:    30 GRARHVVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQSDRIQIVKL 88

Query:    62 TQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
             T      RG                Q   LLW +     +  +FL QNPP +P  +AV W
Sbjct:    89 TDL----RGLGAGPRILQYGVKVVFQAVYLLWKMMRTDPAAYIFL-QNPPGLPA-IAVCW 142

Query:   122 -ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
                 +  S  ++DWHN+GY+++ L  G R   V + +W EK++G++++  LCVT AM+ +
Sbjct:   143 FVCCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWYEKFFGRLSHLNLCVTHAMRED 202

Query:   181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS-NGMEGQKAD 239
             LA+NW ++A  LYD+P  FF  T L+ +HELF +L++  + P   Q C   +  + +++ 
Sbjct:   203 LAENWCLRAVTLYDKPASFFKETPLDLQHELFMKLSRT-YSPF--QSCSEPSDPDTERSA 259

Query:   240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 286
              T   S + + V     RPAL+VSSTSWT DEDF ILL A   ++++
Sbjct:   260 FTERDSQSRV-VRRLHGRPALLVSSTSWTEDEDFSILLRALEKFEQQ 305

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

UNIPROTKB|F1RKX2 LOC100524193 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 472 (171.2 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
 Identities = 115/303 (37%), Positives = 169/303 (55%)

Query:     2 GRRGR-ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
             GR  R   VVVLGDLGRSPRMQY ALSLA+     V ++ +  S+P   +L+   I I +
Sbjct:    33 GRASRHVMVVVLGDLGRSPRMQYHALSLAKN-GFSVTLLGFCNSRPREELLQSDRIQIVS 91

Query:    61 MTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
             +T+ P +  G                Q   LLW L  +  +  +FL QNPP +P  +AV 
Sbjct:    92 LTELPRLTVGPHILQYGVKVV----FQAVHLLWKLMCRDPAAYIFL-QNPPGLPA-IAVC 145

Query:   121 W-ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179
             W A+ L  S  ++DWHN+GY+++ L  G     V + +W EK  G++++  LCVT AM+ 
Sbjct:   146 WFAACLCGSKLVIDWHNYGYSIMGLVHGPGHRLVLLAKWYEKLCGRLSHLNLCVTNAMRE 205

Query:   180 ELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILH------QPLGVQDCVSNGM 233
             +LA+NWGIKA  +YD+P  FF  T L+ +H+LF +L++I        +P  + D   +  
Sbjct:   206 DLAENWGIKAVTVYDKPASFFKETPLDLQHQLFMKLSRIYSVFRARSEPSDL-DMERSAF 264

Query:   234 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 293
               + A   + T L G        RPAL+VSSTSWT DEDF +LL A   +++    ++N+
Sbjct:   265 TERDAQSAVVTHLHG--------RPALLVSSTSWTEDEDFSVLLAALEKFEQ----LIND 312

Query:   294 DDS 296
              +S
Sbjct:   313 GES 315

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P16661	ALG1_YEAST	2, ., 4, ., 1, ., 1, 4, 2	0.3412	0.8498	0.8953	yes	no
Q9BT22	ALG1_HUMAN	2, ., 4, ., 1, ., 1, 4, 2	0.4258	0.9112	0.9288	yes	no
Q6FLZ2	ALG1_CANGA	2, ., 4, ., 1, ., 1, 4, 2	0.3312	0.8372	0.88	yes	no
Q75BA5	ALG1_ASHGO	2, ., 4, ., 1, ., 1, 4, 2	0.3384	0.8266	0.8301	yes	no
O13933	ALG1_SCHPO	2, ., 4, ., 1, ., 1, 4, 2	0.3768	0.8266	0.9221	yes	no
Q6BS98	ALG1_DEBHA	2, ., 4, ., 1, ., 1, 4, 2	0.3354	0.8372	0.8389	yes	no
P90522	ALG1_DICDI	2, ., 4, ., 1, ., 1, 4, 2	0.3931	0.8477	0.8133	yes	no
Q5R7A2	ALG1_PONAB	2, ., 4, ., 1, ., 1, 4, 2	0.4225	0.9133	0.9310	yes	no
Q6CVU2	ALG1_KLULA	2, ., 4, ., 1, ., 1, 4, 2	0.3289	0.8245	0.8724	yes	no
Q6C3K2	ALG1_YARLI	2, ., 4, ., 1, ., 1, 4, 2	0.3668	0.8456	0.8639	yes	no
Q921Q3	ALG1_MOUSE	2, ., 4, ., 1, ., 1, 4, 2	0.4227	0.9154	0.8983	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.921
4th Layer	2.4.1.142	0.914

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.01460030	transferase, transferring glycosyl groups (EC-2.4.1.142) (481 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_LG_I2082	hypothetical protein (233 aa)						•	•		0.953
	eugene3.00110811	hypothetical protein (413 aa)					•	•	•		0.950
	estExt_fgenesh4_pg.C_290241	hypothetical protein (80 aa)						•	•		0.931
	fgenesh4_pg.C_scaffold_70000216	hypothetical protein (179 aa)						•	•		0.924
	eugene3.00130240	hypothetical protein (179 aa)						•	•		0.921
	fgenesh4_pm.C_LG_V000700	dolichyl-phosphate beta-D-mannosyltransferase (EC-2.4.1.83) (238 aa)						•	•		0.913
	estExt_Genewise1_v1.C_LG_II0203	dolichyl-phosphate beta-D-mannosyltransferase (EC-2.4.1.83) (240 aa)						•	•		0.913
	fgenesh4_pg.C_LG_II002473	hypothetical protein (89 aa)						•			0.899
	grail3.0049024601	hypothetical protein (361 aa)					•	•	•		0.813
	estExt_fgenesh4_pg.C_LG_VI0713	hypothetical protein (362 aa)					•	•	•		0.813

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	473
PLN02275	371	PLN02275, PLN02275, transferase, transferring glyc	0.0
cd03816	415	cd03816, GT1_ALG1_like, This family is most closel	0.0
cd03794	394	cd03794, GT1_wbuB_like, This family is most closel	2e-13
pfam13692	134	pfam13692, Glyco_trans_1_4, Glycosyl transferases	3e-10
cd03817	374	cd03817, GT1_UGDG_like, This family is most closel	3e-10
COG0438	381	COG0438, RfaG, Glycosyltransferase [Cell envelope	5e-10
cd01635	229	cd01635, Glycosyltransferase_GTB_type, Glycosyltra	8e-10
cd03798	377	cd03798, GT1_wlbH_like, This family is most closel	2e-09
cd03801	374	cd03801, GT1_YqgM_like, This family is most closel	1e-08
cd03822	366	cd03822, GT1_ecORF704_like, This family is most cl	6e-07
cd03801	374	cd03801, GT1_YqgM_like, This family is most closel	1e-06
pfam00534	158	pfam00534, Glycos_transf_1, Glycosyl transferases	5e-05
pfam13579	158	pfam13579, Glyco_trans_4_4, Glycosyl transferase 4	1e-04
cd03820	348	cd03820, GT1_amsD_like, This family is most closel	3e-04
cd05844	367	cd05844, GT1_like_7, Glycosyltransferases catalyze	4e-04
TIGR03088	374	TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH	4e-04
cd03799	355	cd03799, GT1_amsK_like, This is a family of GT1 gl	0.001
pfam13524	92	pfam13524, Glyco_trans_1_2, Glycosyl transferases	0.003

>gnl|CDD|215155 PLN02275, PLN02275, transferase, transferring glycosyl groups

 Score =  696 bits (1797), Expect = 0.0
 Identities = 294/426 (69%), Positives = 316/426 (74%), Gaps = 55/426 (12%)

Query: 1   MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
           MGRRGRA VVVLGD GRSPRMQY ALSLARQ S +VDVVAYGGS+P  A+L HPSIHIH 
Sbjct: 1   MGRRGRAAVVVLGDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALLNHPSIHIHL 60

Query: 61  MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
           M Q P + + LP+VL  + LLLK  IQF MLLWFLCVKI  PDVFLVQNPPSVPTL  VK
Sbjct: 61  MVQ-PRLLQRLPRVLYALALLLKVAIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVK 119

Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
            A  LRR+ F++DWHNFGYTLL+LSLGR    V +YRW E++YGKMA+G LCVT+AMQHE
Sbjct: 120 LACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQHE 179

Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240
           L QNWGI+ATVLYDQPPEFF P SLE                                  
Sbjct: 180 LDQNWGIRATVLYDQPPEFFRPASLE---------------------------------- 205

Query: 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 300
                     + L+PNRPALVVSSTSWTPDEDFGILLEAA+MYDRRVAA LNE DS    
Sbjct: 206 ----------IRLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDS---- 251

Query: 301 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 360
                 + GKQ LYPRLLFIITGKGP K  YEEKI RL L+ VAFRTMWL AEDYPLLLG
Sbjct: 252 ------ASGKQSLYPRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLG 305

Query: 361 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 420
           SADLGV LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI ELVK  KNGLLFSSSSELAD
Sbjct: 306 SADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFSSSSELAD 365

Query: 421 QLLMLF 426
           QLL L 
Sbjct: 366 QLLELL 371

Length = 371

>gnl|CDD|99986 cd03816, GT1_ALG1_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  573 bits (1480), Expect = 0.0
 Identities = 228/463 (49%), Positives = 282/463 (60%), Gaps = 52/463 (11%)

Query: 4   RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
           R R CV+VLGD+GRSPRMQY ALSLA+    +VD+V Y  + PH  IL +P+I IH +  
Sbjct: 3   RKRVCVLVLGDIGRSPRMQYHALSLAK-HGWKVDLVGYLETPPHDEILSNPNITIHPL-- 59

Query: 64  WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS 123
            P  P+ L K+   +   LK L QFF LLW L  K+   D  L+QNPPS+PTL+      
Sbjct: 60  -PPPPQRLNKLPFLLFAPLKVLWQFFSLLWLL-YKLRPADYILIQNPPSIPTLLIAWLYC 117

Query: 124 SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ 183
            LRR+  I+DWHN+GYT+L+L LG     V + +W EK +G++A+  LCVT+AM+ +L Q
Sbjct: 118 LLRRTKLIIDWHNYGYTILALKLGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKEDLQQ 177

Query: 184 --NWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADET 241
             NW I+ATVLYD+PPE F P  LEEKHELF +L K                        
Sbjct: 178 FNNWKIRATVLYDRPPEQFRPLPLEEKHELFLKLAK----------------------TF 215

Query: 242 IFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEV 301
           +   L    V L   RPAL+VSSTSWTPDEDFGILL+A + Y++  A             
Sbjct: 216 LTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAA---TGPKL----- 267

Query: 302 FLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS 361
                        P+LL IITGKGP KE Y E+I+ L+LK+V  RT WLSAEDYP LL S
Sbjct: 268 -------------PKLLCIITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLAS 314

Query: 362 ADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQ 421
           ADLGV LHTSSSGLDLPMKVVDMFGCGLPVCA+ + CI+ELVK  +NGL+F  S ELA+Q
Sbjct: 315 ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFGDSEELAEQ 374

Query: 422 LLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI 464
           L+ L   FP+    L  L+ G  E     RW   W+    PL 
Sbjct: 375 LIDLLSNFPNR-GKLNSLKKGAQEESEL-RWDENWDRVVGPLF 415

The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. Length = 415

>gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 71.1 bits (175), Expect = 2e-13
 Identities = 88/446 (19%), Positives = 154/446 (34%), Gaps = 99/446 (22%)

Query: 14  DLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPS------IHIHTMTQW-PT 66
             G + R    A  L ++   EV V+    + P   I +         + +H      P 
Sbjct: 13  LGGGAFRTTELAEELVKR-GHEVTVITGSPNYPSGKIYKGYKREEVDGVRVH----RVPL 67

Query: 67  IPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLR 126
            P     +LK +L  L         L  L  +   PDV +  +PP +   +A    + L+
Sbjct: 68  PPYKKNGLLKRLLNYLS---FALSALLALLKRRRRPDVIIATSPP-LLIALAALLLARLK 123

Query: 127 RSAFIVDWHN-FGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQHELAQN 184
            + F+++  + +  + ++L L +       + R +E+   + A+  + ++  M+ E    
Sbjct: 124 GAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMR-EYLVR 182

Query: 185 WGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFT 244
            G+                             KI          + NG      D  +F 
Sbjct: 183 RGVPP--------------------------EKIS--------VIPNG-----VDLELFK 203

Query: 245 SLAGIDVFLKPNRPA---LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEV 301
                +   K        +V+ + +    +    LLEAA        A+L +        
Sbjct: 204 PPPADESLRKELGLDDKFVVLYAGNIGRAQGLDTLLEAA--------ALLKD-------- 247

Query: 302 FLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS 361
                        P + F+I G GP+KE  +E  + L L  V F    +  E+ P LL +
Sbjct: 248 ------------RPDIRFLIVGDGPEKEELKELAKALGLDNVTF-LGRVPKEELPELLAA 294

Query: 362 ADLGVC--LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSS--SSE 417
           AD+G+       +     P K+ +    G PV A       ELV+    GL+        
Sbjct: 295 ADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEA 354

Query: 418 LADQLLMLFKGFPDDSDVLKKL-RNG 442
           LA  +L L     DD +   ++  NG
Sbjct: 355 LAAAILELL----DDPEERAEMGENG 376

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394

>gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1

 Score = 57.7 bits (140), Expect = 3e-10
 Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 12/128 (9%)

Query: 300 EVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL 359
              L+E     +   P +   I G GP++      + RL    V F       ED   LL
Sbjct: 18  LWLLEEALPLLRKALPDVELHIIGSGPEE------LARL-APNVHFLGFV---EDLAALL 67

Query: 360 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELA 419
            SAD+ +      +G   P+K+++    GLPV A           +    L+     E A
Sbjct: 68  ASADVALAPLRFGAGS--PLKLLEALAAGLPVVATDIGAEGLPEDLGWGVLVADDPEEFA 125

Query: 420 DQLLMLFK 427
           + ++ L  
Sbjct: 126 EAIVRLLA 133

Length = 134

>gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 61.1 bits (149), Expect = 3e-10
 Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 6/145 (4%)

Query: 312 YLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHT 370
              P +  +I G GP++E  EE  R L L  RV F T ++  E+ P    +ADL V    
Sbjct: 229 KEEPDVKLVIVGDGPEREELEELARELGLADRVIF-TGFVPREELPDYYKAADLFV--FA 285

Query: 371 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE-LADQLLMLFKGF 429
           S++     + +++    GLPV AV    + +LV   +NG LF    E LA+ LL L +  
Sbjct: 286 STTET-QGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDEALAEALLRLLQDP 344

Query: 430 PDDSDVLKKLRNGTLEMGLSARWAT 454
                + K       +   + +   
Sbjct: 345 ELRRRLSKNAEESAEKFSFAKKVEK 369

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374

>gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane]

 Score = 60.7 bits (146), Expect = 5e-10
 Identities = 79/427 (18%), Positives = 141/427 (33%), Gaps = 96/427 (22%)

Query: 47  HAAILEHPSIHIHTMTQWPTIPRGLPKV---LKPVLLLLKPLIQFFMLLWFLCVKIASPD 103
            A  L      +  +        G+  +      + LL+  L    + L  L  ++   D
Sbjct: 26  KALRLLGRGHEVLVIAPEKLEGLGIEVLRLPSVSLPLLIVRLRPALLRLLLLLKRLLPYD 85

Query: 104 VFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVS--IYRWIEK 161
           +    +    P  +       L     +V  H     +L L        +   + + ++K
Sbjct: 86  IIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLKK 145

Query: 162 YYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQ 221
               +A+  + V+ A++  L                                  NKI+  
Sbjct: 146 ALRLLADRVIAVSPALKELLEALGVP----------------------------NKIVVI 177

Query: 222 PLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAAL 281
           P G+             D   F + A I +  +  +  ++       P++   +L+EAA 
Sbjct: 178 PNGI-------------DTEKF-APARIGLLPEGGKFVVLYVGR-LDPEKGLDLLIEAAA 222

Query: 282 MYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEEKIRRLRL 340
              +R                            P +  +I G GP++ E  E+  ++L L
Sbjct: 223 KLKKR---------------------------GPDIKLVIVGDGPERREELEKLAKKLGL 255

Query: 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE 400
           +       ++  E+   LL SAD  V +  S S     + +++    G PV A     I 
Sbjct: 256 EDNVKFLGYVPDEELAELLASAD--VFVLPSLSE-GFGLVLLEAMAAGTPVIASDVGGIP 312

Query: 401 ELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATE--- 455
           E+V+  + GLL       ELAD L  L +          +LR    E+G +AR   E   
Sbjct: 313 EVVEDGETGLLVPPGDVEELADALEQLLE--------DPELRE---ELGEAARERVEEEF 361

Query: 456 -WEEHAK 461
            WE  A+
Sbjct: 362 SWERIAE 368

Length = 381

>gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score = 58.8 bits (142), Expect = 8e-10
 Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 4/100 (4%)

Query: 314 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 372
            P L  +I G GP++E  EE +  L L  RV F       E   LLL +AD  V +  S 
Sbjct: 133 GPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAAD--VFVLPSL 190

Query: 373 SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 412
                 + V++   CGLPV A       E+V+    GLL 
Sbjct: 191 RE-GFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229

>gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 58.5 bits (142), Expect = 2e-09
 Identities = 86/455 (18%), Positives = 141/455 (30%), Gaps = 106/455 (23%)

Query: 16  GRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVL 75
           G    ++  A +LA++  +EV V+A G   P    L    +              L K  
Sbjct: 15  GGGIFVKELARALAKR-GVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGP 73

Query: 76  KPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWH 135
              LL  + L++   L  F       PD+       + P   A            +V  H
Sbjct: 74  LLYLLAARALLKLLKLKRF------RPDLIHAHF--AYPDGFAAALLKRKLGIPLVVTLH 125

Query: 136 NFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLY 193
                LL            + R + +   + A+  + V++A+  EL        K TV+ 
Sbjct: 126 GSDVNLLP--------RKRLLRALLRRALRRADAVIAVSEALADELKALGIDPEKVTVI- 176

Query: 194 DQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFT--SLAGIDV 251
                                       P GV             D   F+    A    
Sbjct: 177 ----------------------------PNGV-------------DTERFSPADRAEARK 195

Query: 252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQ 311
              P    +++      P +    L+EA       +A +L +                  
Sbjct: 196 LGLPEDKKVILFVGRLVPRKGIDYLIEA-------LARLLKK------------------ 230

Query: 312 YLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHT 370
              P +  +I G GP +E+ E     L L  RV F    +  E+ P    +AD+   L +
Sbjct: 231 --RPDVHLVIVGDGPLREALEALAAELGLEDRVTF-LGAVPHEEVPAYYAAADV-FVLPS 286

Query: 371 SSSGLDLPMKVVDMFGCGLPVCAVSYSC--IEELVKVDKNGLLF--SSSSELADQLLMLF 426
              G    + +++   CGLPV  V+     I E++   +NGLL        LA+ +L L 
Sbjct: 287 LREG--FGLVLLEAMACGLPV--VATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLL 342

Query: 427 KGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAK 461
                    L+  R     +     W    E   +
Sbjct: 343 -----ADPWLRLGRAARRRVAERFSWENVAERLLE 372

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377

>gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

 Score = 56.6 bits (137), Expect = 1e-08
 Identities = 47/158 (29%), Positives = 68/158 (43%), Gaps = 28/158 (17%)

Query: 314 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 372
           YP +  +I G GP +E  E     L L  RV F   ++  ED P L  +AD  V +  S 
Sbjct: 228 YPDVRLVIVGDGPLREELEALAAELGLGDRVTF-LGFVPDEDLPALYAAAD--VFVLPSL 284

Query: 373 S-GLDLPMKVVDMFGCGLPVCAVSYSC--IEELVKVDKNGLLF--SSSSELADQLLMLFK 427
             G    + +++    GLPV  V+     I E+V+  + GLL        LA+ +L L  
Sbjct: 285 YEG--FGLVLLEAMAAGLPV--VASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLL- 339

Query: 428 GFPDDSDVLKKLRNGTLEMGLSAR-WATE---WEEHAK 461
              DD +    LR     +G +AR    E   W+  A 
Sbjct: 340 ---DDPE----LRR---RLGEAARERVAERFSWDRVAA 367

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374

>gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 51.1 bits (123), Expect = 6e-07
 Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 26/153 (16%)

Query: 314 YPRLLFIITGKG-PDKESYE----EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVC 367
           +P +  ++ G+  PD E Y         RL L  RV F   +L  E+ P L  +AD+ V 
Sbjct: 214 HPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADV-VV 272

Query: 368 L-----HTSSSGLDLPMKVVDM-FGCGLPVCAVSYSCIEELVKVDKNGLL--FSSSSELA 419
           L       + SG      V+    G G PV +      EE++     GLL      + LA
Sbjct: 273 LPYRSADQTQSG------VLAYAIGFGKPVISTPVGHAEEVLD-GGTGLLVPPGDPAALA 325

Query: 420 DQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARW 452
           + +  L      D ++ + LR    E   +  W
Sbjct: 326 EAIRRLL----ADPELAQALRARAREYARAMSW 354

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366

>gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

 Score = 50.1 bits (120), Expect = 1e-06
 Identities = 32/201 (15%), Positives = 61/201 (30%), Gaps = 31/201 (15%)

Query: 21  MQYQALSLARQMSL---EVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKP 77
            +   L LAR ++    EV V+  G             + +                   
Sbjct: 16  AERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVR--------------PPPL 61

Query: 78  VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137
           + +    L+    L     ++    DV    +  ++           L     ++  H  
Sbjct: 62  LRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAAR---LLGIPLVLTVHGL 118

Query: 138 GYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI---KATVLY- 193
            +      LG         R +E+   + A+  + V++A + EL +  G+   K TV+  
Sbjct: 119 EFGRPGNELGLLLKL---ARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPN 175

Query: 194 --DQPPEFFHPTSLEEKHELF 212
             D   E F P     +  L 
Sbjct: 176 GVD--TERFRPAPRAARRRLG 194

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374

>gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1

 Score = 43.4 bits (103), Expect = 5e-05
 Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 5/116 (4%)

Query: 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS 373
           +P L  +I G G +++  ++   +L L+       ++  ED   L   ADL V    S  
Sbjct: 31  HPNLKLVIVGDGEEEKKLKKLALKLGLEDNVIFVGFVPDEDLIELYRIADLFV--LPSRY 88

Query: 374 GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS--ELADQLLMLFK 427
                + +++    G+PV A       E+VK  + GLL        LA+ +  L K
Sbjct: 89  E-GFGLVLLEAMAAGVPVIATDVGGPAEIVKDGETGLLVDPGDAEALAEAIEKLLK 143

Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158

>gnl|CDD|222237 pfam13579, Glyco_trans_4_4, Glycosyl transferase 4-like domain

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 37/172 (21%), Positives = 60/172 (34%), Gaps = 28/172 (16%)

Query: 21  MQYQALSLARQMS---LEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKP 77
            +   L LAR ++    EV VV   G  P    LE   + +H +   P   R        
Sbjct: 3   AERYVLELARALAARGHEVTVVTPRGP-PGRPELEEDGVRVHRL---PVPRRPSL----- 53

Query: 78  VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137
               L+ L +   LL     +   PDV     P +    +  + A+  R    +V  H  
Sbjct: 54  -PGDLRALRRLRRLL-----RRERPDVVHAHGPLA---GLLARLAARRRGVPVVVTPHGL 104

Query: 138 GYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKA 189
                S    R      + R +E+   + A+  + V++A    L    G+ A
Sbjct: 105 ALRQGSGLKRR------LARALERRLLRRADAVVAVSEAEAELLRA-LGVPA 149

Length = 158

>gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 42.6 bits (101), Expect = 3e-04
 Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 20/128 (15%)

Query: 319 FIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLD 376
             I G GP++E+ E  I+ L L  RV       + E+Y      A +   L TS   G  
Sbjct: 212 LRIVGDGPEREALEALIKELGLEDRVILLGFTKNIEEY---YAKASI-FVL-TSRFEG-- 264

Query: 377 LPMKVVDMFGCGLPVCAVSYSC---IEELVKVDKNGLLF--SSSSELADQLLMLFKGFPD 431
            PM +++    GLPV  +S+ C     E+++   NGLL        LA+ LL L +    
Sbjct: 265 FPMVLLEAMAFGLPV--ISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLME---- 318

Query: 432 DSDVLKKL 439
           D ++ K++
Sbjct: 319 DEELRKRM 326

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348

>gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score = 42.2 bits (100), Expect = 4e-04
 Identities = 40/147 (27%), Positives = 57/147 (38%), Gaps = 28/147 (19%)

Query: 315 PRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLH--TS 371
            RL+ I  G GP   + E   R L L  RV F        +   L+  A +       T+
Sbjct: 220 VRLVII--GDGPLLAALEALARALGLGGRVTFLG-AQPHAEVRELMRRARI-FLQPSVTA 275

Query: 372 SSGLD---LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLF 426
            SG D   LP+ +++    G+PV A  +  I E V+  + GLL      + LA  L  L 
Sbjct: 276 PSG-DAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRL- 333

Query: 427 KGFPDDSDVLKKLRNGTL--EMGLSAR 451
                       L +  L   MG + R
Sbjct: 334 ------------LADPDLRARMGAAGR 348

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367

>gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated

 Score = 42.0 bits (99), Expect = 4e-04
 Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 11/113 (9%)

Query: 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAE--DYPLLLGSADLGVCLHTSS 372
            RL  +I G GP + + E+ +R   L  +     WL  E  D P L+ + DL V     S
Sbjct: 228 ERLRLVIVGDGPARGACEQMVRAAGLAHLV----WLPGERDDVPALMQALDLFV---LPS 280

Query: 373 SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS--ELADQLL 423
               +   +++    GLPV A +     ELV+    G L        LA  L 
Sbjct: 281 LAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQ 333

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374

>gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria

 Score = 40.2 bits (95), Expect = 0.001
 Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 5/95 (5%)

Query: 321 ITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGV--CLHTSSSGLD- 376
           I G GP ++  E  I  L L  RV       S E+   LL +ADL V   +  +    + 
Sbjct: 215 IVGDGPLRDELEALIAELGLEDRVTL-LGAKSQEEVRELLRAADLFVLPSVTAADGDREG 273

Query: 377 LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 411
           LP+ +++    GLPV +   S I ELV+  + GLL
Sbjct: 274 LPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLL 308

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355

>gnl|CDD|222197 pfam13524, Glyco_trans_1_2, Glycosyl transferases group 1

 Score = 36.8 bits (86), Expect = 0.003
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 366 VCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQL 422
           + L+ S       M+V +   CG P+       +EEL +  +  +L+    ELA++L
Sbjct: 1   IVLNPSRRD-SPNMRVFEAAACGAPLLTDRTPGLEELFEPGEEIVLYRDPEELAEKL 56

Length = 92

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	473
KOG2941	444	consensus Beta-1,4-mannosyltransferase [Posttransl	100.0
cd03816	415	GT1_ALG1_like This family is most closely related	100.0
PLN02275	371	transferase, transferring glycosyl groups	100.0
PRK10307	412	putative glycosyl transferase; Provisional	100.0
PLN02871	465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	100.0
TIGR03449	405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	100.0
cd03796	398	GT1_PIG-A_like This family is most closely related	100.0
TIGR03088	374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
cd03805	392	GT1_ALG2_like This family is most closely related	100.0
TIGR02472	439	sucr_P_syn_N sucrose-phosphate synthase, putative,	100.0
cd04962	371	GT1_like_5 This family is most closely related to	100.0
PRK15427	406	colanic acid biosynthesis glycosyltransferase WcaL	100.0
cd03800	398	GT1_Sucrose_synthase This family is most closely r	100.0
cd03818	396	GT1_ExpC_like This family is most closely related	100.0
cd03794	394	GT1_wbuB_like This family is most closely related	100.0
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	100.0
TIGR02149	388	glgA_Coryne glycogen synthase, Corynebacterium fam	100.0
cd03817	374	GT1_UGDG_like This family is most closely related	100.0
cd05844	367	GT1_like_7 Glycosyltransferases catalyze the trans	100.0
cd03819	355	GT1_WavL_like This family is most closely related	100.0
PRK00654	466	glgA glycogen synthase; Provisional	100.0
cd03806	419	GT1_ALG11_like This family is most closely related	100.0
cd04955	363	GT1_like_6 This family is most closely related to	100.0
cd03814	364	GT1_like_2 This family is most closely related to	100.0
TIGR02095	473	glgA glycogen/starch synthases, ADP-glucose type.	100.0
PRK15484	380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	100.0
cd03812	358	GT1_CapH_like This family is most closely related	100.0
cd03808	359	GT1_cap1E_like This family is most closely related	100.0
cd03807	365	GT1_WbnK_like This family is most closely related	100.0
PRK15179	694	Vi polysaccharide biosynthesis protein TviE; Provi	100.0
cd03799	355	GT1_amsK_like This is a family of GT1 glycosyltran	100.0
cd03795	357	GT1_like_4 This family is most closely related to	100.0
PLN02949	463	transferase, transferring glycosyl groups	100.0
cd03801	374	GT1_YqgM_like This family is most closely related	100.0
cd04951	360	GT1_WbdM_like This family is most closely related	100.0
TIGR02470	784	sucr_synth sucrose synthase. This model represents	100.0
PRK14099	485	glycogen synthase; Provisional	100.0
cd03820	348	GT1_amsD_like This family is most closely related	100.0
cd03821	375	GT1_Bme6_like This family is most closely related	100.0
PLN02939	977	transferase, transferring glycosyl groups	100.0
cd03822	366	GT1_ecORF704_like This family is most closely rela	100.0
cd03792	372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	100.0
PLN02846	462	digalactosyldiacylglycerol synthase	100.0
cd03791	476	GT1_Glycogen_synthase_DULL1_like This family is mo	99.98
PRK14098	489	glycogen synthase; Provisional	99.98
cd03813	475	GT1_like_3 This family is most closely related to	99.98
PLN02316	1036	synthase/transferase	99.98
cd03809	365	GT1_mtfB_like This family is most closely related	99.98
PLN00142	815	sucrose synthase	99.97
cd03798	377	GT1_wlbH_like This family is most closely related	99.97
cd03802	335	GT1_AviGT4_like This family is most closely relate	99.97
cd03811	353	GT1_WabH_like This family is most closely related	99.97
cd03823	359	GT1_ExpE7_like This family is most closely related	99.97
PRK15490	578	Vi polysaccharide biosynthesis protein TviE; Provi	99.97
PRK09922	359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	99.97
cd03825	365	GT1_wcfI_like This family is most closely related	99.97
cd03804	351	GT1_wbaZ_like This family is most closely related	99.97
TIGR03087	397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	99.97
TIGR02918	500	accessory Sec system glycosylation protein GtfA. M	99.97
cd04946	407	GT1_AmsK_like This family is most closely related	99.97
PRK10125	405	putative glycosyl transferase; Provisional	99.97
PLN02501	794	digalactosyldiacylglycerol synthase	99.96
cd04949	372	GT1_gtfA_like This family is most closely related	99.96
KOG1111	426	consensus N-acetylglucosaminyltransferase complex,	99.95
cd04950	373	GT1_like_1 Glycosyltransferases catalyze the trans	99.95
PHA01630	331	putative group 1 glycosyl transferase	99.94
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	99.93
cd03785	350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	99.93
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	99.92
PRK05749	425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	99.92
PHA01633	335	putative glycosyl transferase group 1	99.91
PRK09814	333	beta-1,6-galactofuranosyltransferase; Provisional	99.89
PRK13609	380	diacylglycerol glucosyltransferase; Provisional	99.89
PF00534	172	Glycos_transf_1: Glycosyl transferases group 1; In	99.88
cd03793	590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	99.88
cd03788	460	GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a	99.88
KOG1387	465	consensus Glycosyltransferase [Cell wall/membrane/	99.86
PLN02605	382	monogalactosyldiacylglycerol synthase	99.85
TIGR02400	456	trehalose_OtsA alpha,alpha-trehalose-phosphate syn	99.85
cd01635	229	Glycosyltransferase_GTB_type Glycosyltransferases	99.84
PRK13608	391	diacylglycerol glucosyltransferase; Provisional	99.83
PRK00025	380	lpxB lipid-A-disaccharide synthase; Reviewed	99.83
COG0297	487	GlgA Glycogen synthase [Carbohydrate transport and	99.8
KOG0853	495	consensus Glycosyltransferase [Cell wall/membrane/	99.79
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.78
cd03786	363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	99.77
TIGR00236	365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	99.76
COG0438	381	RfaG Glycosyltransferase [Cell envelope biogenesis	99.76
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	99.72
TIGR00215	385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	99.68
PF13692	135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	99.68
TIGR03713	519	acc_sec_asp1 accessory Sec system protein Asp1. Th	99.6
TIGR02398	487	gluc_glyc_Psyn glucosylglycerol-phosphate synthase	99.57
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	99.51
COG0707	357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	99.5
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.42
TIGR02094	601	more_P_ylases alpha-glucan phosphorylases. This fa	99.35
PF13579	160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	99.32
TIGR03492	396	conserved hypothetical protein. This protein famil	99.26
PF13524	92	Glyco_trans_1_2: Glycosyl transferases group 1	99.24
PF05693	633	Glycogen_syn: Glycogen synthase; InterPro: IPR0086	99.19
PF13439	177	Glyco_transf_4: Glycosyltransferase Family 4; PDB:	99.18
TIGR02919	438	accessory Sec system glycosyltransferase GtfB. Mem	99.12
COG1519	419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	99.11
PF13528	318	Glyco_trans_1_3: Glycosyl transferase family 1	99.07
TIGR03568	365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	99.03
PF13477	139	Glyco_trans_4_2: Glycosyl transferase 4-like	98.98
cd04299	778	GT1_Glycogen_Phosphorylase_like This family is mos	98.96
PF09314	185	DUF1972: Domain of unknown function (DUF1972); Int	98.94
cd03784	401	GT1_Gtf_like This family includes the Gtfs, a grou	98.94
TIGR03590	279	PseG pseudaminic acid biosynthesis-associated prot	98.89
TIGR01426	392	MGT glycosyltransferase, MGT family. This model de	98.89
COG0763	381	LpxB Lipid A disaccharide synthetase [Cell envelop	98.66
PF04464	369	Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate	98.58
PF00982	474	Glyco_transf_20: Glycosyltransferase family 20; In	98.57
TIGR00661	321	MJ1255 conserved hypothetical protein. This model	98.57
COG0381	383	WecB UDP-N-acetylglucosamine 2-epimerase [Cell env	98.57
PRK10117	474	trehalose-6-phosphate synthase; Provisional	98.55
PF02684	373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	98.54
PF02350	346	Epimerase_2: UDP-N-acetylglucosamine 2-epimerase;	98.52
PRK01021	608	lpxB lipid-A-disaccharide synthase; Reviewed	98.37
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	98.29
COG0380	486	OtsA Trehalose-6-phosphate synthase [Carbohydrate	98.26
PF04007	335	DUF354: Protein of unknown function (DUF354); Inte	98.18
PHA03392	507	egt ecdysteroid UDP-glucosyltransferase; Provision	98.15
COG4671	400	Predicted glycosyl transferase [General function p	98.14
COG4641	373	Uncharacterized protein conserved in bacteria [Fun	98.11
COG1819	406	Glycosyl transferases, related to UDP-glucuronosyl	98.1
COG3914	620	Spy Predicted O-linked N-acetylglucosamine transfe	98.03
PF13844	468	Glyco_transf_41: Glycosyl transferase family 41; P	98.02
PLN02448	459	UDP-glycosyltransferase family protein	97.95
PRK02797	322	4-alpha-L-fucosyltransferase; Provisional	97.93
PLN02208	442	glycosyltransferase family protein	97.9
PLN02173	449	UDP-glucosyl transferase family protein	97.79
PRK10017	426	colanic acid biosynthesis protein; Provisional	97.78
PRK14089	347	ipid-A-disaccharide synthase; Provisional	97.7
PF07429	360	Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc	97.6
TIGR02195	334	heptsyl_trn_II lipopolysaccharide heptosyltransfer	97.55
PLN02562	448	UDP-glycosyltransferase	97.49
PRK10422	352	lipopolysaccharide core biosynthesis protein; Prov	97.44
COG1817	346	Uncharacterized protein conserved in archaea [Func	97.34
PLN02410	451	UDP-glucoronosyl/UDP-glucosyl transferase family p	97.33
PF08323	245	Glyco_transf_5: Starch synthase catalytic domain;	97.26
PF04101	167	Glyco_tran_28_C: Glycosyltransferase family 28 C-t	97.25
PLN00414	446	glycosyltransferase family protein	97.22
PLN03007	482	UDP-glucosyltransferase family protein	97.18
PLN02534	491	UDP-glycosyltransferase	97.07
TIGR02201	344	heptsyl_trn_III lipopolysaccharide heptosyltransfe	97.0
cd03789	279	GT1_LPS_heptosyltransferase Lipopolysaccharide hep	96.97
PF00201	500	UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera	96.8
COG3660	329	Predicted nucleoside-diphosphate-sugar epimerase [	96.79
PF06258	311	Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP	96.73
PRK10916	348	ADP-heptose:LPS heptosyltransferase II; Provisiona	96.73
KOG3742	692	consensus Glycogen synthase [Carbohydrate transpor	96.7
COG0859	334	RfaF ADP-heptose:LPS heptosyltransferase [Cell env	96.7
PLN02670	472	transferase, transferring glycosyl groups	96.66
COG3980	318	spsG Spore coat polysaccharide biosynthesis protei	96.61
TIGR03609	298	S_layer_CsaB polysaccharide pyruvyl transferase Cs	96.57
PLN02764	453	glycosyltransferase family protein	95.99
COG0058	750	GlgP Glucan phosphorylase [Carbohydrate transport	95.92
PLN03004	451	UDP-glycosyltransferase	95.88
PLN00164	480	glucosyltransferase; Provisional	95.84
PF12000	171	Glyco_trans_4_3: Gkycosyl transferase family 4 gro	95.84
PLN02210	456	UDP-glucosyl transferase	95.76
PLN02555	480	limonoid glucosyltransferase	95.65
PLN03015	470	UDP-glucosyl transferase	95.16
PLN02554	481	UDP-glycosyltransferase family protein	95.0
PLN02167	475	UDP-glycosyltransferase family protein	94.98
PF10087	97	DUF2325: Uncharacterized protein conserved in bact	94.84
PRK14986	815	glycogen phosphorylase; Provisional	94.49
PLN02863	477	UDP-glucoronosyl/UDP-glucosyl transferase family p	94.36
PF01075	247	Glyco_transf_9: Glycosyltransferase family 9 (hept	94.02
TIGR02193	319	heptsyl_trn_I lipopolysaccharide heptosyltransfera	93.93
cd04300	797	GT1_Glycogen_Phosphorylase This is a family of oli	93.88
PF04230	286	PS_pyruv_trans: Polysaccharide pyruvyl transferase	93.73
PLN02152	455	indole-3-acetate beta-glucosyltransferase	93.51
TIGR02093	794	P_ylase glycogen/starch/alpha-glucan phosphorylase	93.11
PF00862	550	Sucrose_synth: Sucrose synthase; InterPro: IPR0003	93.02
PF11997	268	DUF3492: Domain of unknown function (DUF3492); Int	92.94
PLN02207	468	UDP-glycosyltransferase	92.91
PRK14985	798	maltodextrin phosphorylase; Provisional	92.19
PRK10964	322	ADP-heptose:LPS heptosyl transferase I; Provisiona	92.16
PF08660	170	Alg14: Oligosaccharide biosynthesis protein Alg14	92.07
PF00343	713	Phosphorylase: Carbohydrate phosphorylase; InterPr	91.94
PF05159	269	Capsule_synth: Capsule polysaccharide biosynthesis	91.22
PLN02992	481	coniferyl-alcohol glucosyltransferase	90.44
PF10093	374	DUF2331: Uncharacterized protein conserved in bact	90.08
KOG1192	496	consensus UDP-glucuronosyl and UDP-glucosyl transf	86.68
PF08288	90	PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP	86.25
KOG1021	464	consensus Acetylglucosaminyltransferase EXT1/exost	83.37
COG1887	388	TagB Putative glycosyl/glycerophosphate transferas	81.13
PF06925	169	MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy	80.88
PF11440	355	AGT: DNA alpha-glucosyltransferase; InterPro: IPR0	80.84

>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=9.3e-65  Score=492.65  Aligned_cols=431  Identities=54%  Similarity=0.913  Sum_probs=388.6

Q ss_pred             CCCCCeEEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHH
Q 011979            1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL   80 (473)
Q Consensus         1 m~~~~~~~i~~~~~~g~s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~   80 (473)
                      |.+++++||+++||+|+||||+|+|.+||++ |++|+++++.++.+.+++..+++|++|.++..+    .+...++.+..
T Consensus         9 ~~~k~ra~vvVLGDvGRSPRMqYHA~Sla~~-gf~VdliGy~~s~p~e~l~~hprI~ih~m~~l~----~~~~~p~~~~l   83 (444)
T KOG2941|consen    9 KSKKKRAIVVVLGDVGRSPRMQYHALSLAKL-GFQVDLIGYVESIPLEELLNHPRIRIHGMPNLP----FLQGGPRVLFL   83 (444)
T ss_pred             ccccceEEEEEecccCCChHHHHHHHHHHHc-CCeEEEEEecCCCChHHHhcCCceEEEeCCCCc----ccCCCchhhhh
Confidence            5678999999999999999999999999998 999999999999999999999999999999433    34445566778


Q ss_pred             HHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhh-hhhhhcCCCchHHHHHHHH
Q 011979           81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYT-LLSLSLGRRSHFVSIYRWI  159 (473)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-~~~~~~~~~~~~~~~~~~~  159 (473)
                      ..|.++|+++++|.++. ...+|++.++|||++|++.++.+.+.+++.++++|||+++|+ .++...+..+++.+..+|+
T Consensus        84 ~lKvf~Qfl~Ll~aL~~-~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~~~~  162 (444)
T KOG2941|consen   84 PLKVFWQFLSLLWALFV-LRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLKLGFQHPLVRLVRWL  162 (444)
T ss_pred             HHHHHHHHHHHHHHHHh-ccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhhcCCCCchHHHHHHH
Confidence            89999999999999998 589999999999999999999999999999999999999997 6777788999999999999


Q ss_pred             HHHHhhcCCEEEEcCHHHHHHHHHHhCC-ceEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCc
Q 011979          160 EKYYGKMANGCLCVTQAMQHELAQNWGI-KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA  238 (473)
Q Consensus       160 e~~~~~~ad~vi~vS~~~~~~l~~~~g~-~~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  238 (473)
                      |+++.+.||+-.|||++|++++.++||+ .+.++|+.|++  ++++.+++|+++.+++..      ..++...-.+.+..
T Consensus       163 E~~fgk~a~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps--~~~~l~~~H~lf~~l~~d------~~~f~ar~~q~~~~  234 (444)
T KOG2941|consen  163 EKYFGKLADYNLCVTKAMREDLIQNWGINRAKVLYDRPPS--KPTPLDEQHELFMKLAGD------HSPFRAREPQDKAL  234 (444)
T ss_pred             HHHhhcccccchhhHHHHHHHHHHhcCCceeEEEecCCCC--CCCchhHHHHHHhhhccc------cchhhhcccccchh
Confidence            9999999999999999999999999997 59999999887  788899999999998742      11233332344556


Q ss_pred             cchhhhcccc-cccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCE
Q 011979          239 DETIFTSLAG-IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL  317 (473)
Q Consensus       239 ~~~~~~~~~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (473)
                      +++.|+.... +++...+.+|++++.+.+|++..++.+|++|+..+.+.                    .-.++...|.+
T Consensus       235 ~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~--------------------~~~~~~~lP~l  294 (444)
T KOG2941|consen  235 ERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQ--------------------LYDKTHNLPSL  294 (444)
T ss_pred             hhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhh--------------------hhhccCCCCcE
Confidence            7788886544 78888999999999999999999999999999987542                    11123357999


Q ss_pred             EEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC
Q 011979          318 LFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS  397 (473)
Q Consensus       318 ~l~ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~  397 (473)
                      ..+|.|+||.++.+.+.++++++.+|.+..+|++.||++.++.+||++|++|++|+|.++|||+.+++.||+||||.++.
T Consensus       295 lciITGKGPlkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fk  374 (444)
T KOG2941|consen  295 LCIITGKGPLKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFK  374 (444)
T ss_pred             EEEEcCCCchhHHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccceecCCceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Q 011979          398 CIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITE  466 (473)
Q Consensus       398 ~~~e~i~~~~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  466 (473)
                      ++.|+|+|+.||++++|.++++++|..++++|+++.+.+.++++|+++.. +.+|+.+|++++.++++.
T Consensus       375 cl~ELVkh~eNGlvF~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~-e~RW~~~W~~~~~P~~~~  442 (444)
T KOG2941|consen  375 CLDELVKHGENGLVFEDSEELAEQLQMLFKNFPDNADELNQLKKNLREEQ-ELRWDESWERTALPLVMD  442 (444)
T ss_pred             hHHHHHhcCCCceEeccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHH-hhhHHHHHHHhhhhhhhh
Confidence            99999999999999999999999999999999999999999999999974 999999999999998764

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.8e-47  Score=400.20  Aligned_cols=411  Identities=54%  Similarity=0.922  Sum_probs=315.0

Q ss_pred             CCCCeEEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHH
Q 011979            2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLL   81 (473)
Q Consensus         2 ~~~~~~~i~~~~~~g~s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~   81 (473)
                      .++||+|++.+.++|.+.|+.++|.+|+++ ||+|+|+++.+..+..+.....+|.++.++.  .+ ....+..+.+...
T Consensus         1 ~~~~~~~~~~~~~~~~~~R~~~~a~~L~~~-G~~V~ii~~~~~~~~~~~~~~~~v~~~~~~~--~~-~~~~~~~~~~~~~   76 (415)
T cd03816           1 PKRKRVCVLVLGDIGRSPRMQYHALSLAKH-GWKVDLVGYLETPPHDEILSNPNITIHPLPP--PP-QRLNKLPFLLFAP   76 (415)
T ss_pred             CCccEEEEEEecccCCCHHHHHHHHHHHhc-CceEEEEEecCCCCCHHHhcCCCEEEEECCC--Cc-cccccchHHHHHH
Confidence            379999999999999999999999999997 9999999987655433334577999999882  21 0122334444444


Q ss_pred             HHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHH
Q 011979           82 LKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEK  161 (473)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~  161 (473)
                      ...+.+++.+++.+..+ .+||+||+|+|+..++..+++++++..+.|+|+++|+.++.......+..+.+.++++++|+
T Consensus        77 ~~~~~~~~~~~~~l~~~-~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~  155 (415)
T cd03816          77 LKVLWQFFSLLWLLYKL-RPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALKLGENHPLVRLAKWYEK  155 (415)
T ss_pred             HHHHHHHHHHHHHHHhc-CCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcccCCCCHHHHHHHHHHH
Confidence            45555555555555443 68999999998888877778888888899999999998654443333344556678889999


Q ss_pred             HHhhcCCEEEEcCHHHHHHHHHHhCC---ceEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCc
Q 011979          162 YYGKMANGCLCVTQAMQHELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA  238 (473)
Q Consensus       162 ~~~~~ad~vi~vS~~~~~~l~~~~g~---~~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  238 (473)
                      .+++.+|.++|+|+.+++++.+ ++.   ++.+|||++.+.|.|...+........++...                   
T Consensus       156 ~~~~~ad~ii~vS~~~~~~l~~-~~~~~~ki~vI~Ng~~~~f~p~~~~~~~~~~~~~~~~~-------------------  215 (415)
T cd03816         156 LFGRLADYNLCVTKAMKEDLQQ-FNNWKIRATVLYDRPPEQFRPLPLEEKHELFLKLAKTF-------------------  215 (415)
T ss_pred             HHhhcCCEeeecCHHHHHHHHh-hhccCCCeeecCCCCHHHceeCcHHHHHHHHHhccccc-------------------
Confidence            9999999999999999999987 444   38999999766777664332221111100000                   


Q ss_pred             cchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEE
Q 011979          239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL  318 (473)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (473)
                         .............++++.+++++|++.+.||++.|++|+..+.+..                   .  .....|+++
T Consensus       216 ---~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~-------------------~--~~~~~~~i~  271 (415)
T cd03816         216 ---LTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSA-------------------A--TGPKLPKLL  271 (415)
T ss_pred             ---cccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhh-------------------c--ccccCCCEE
Confidence               0000000000123345558889999999999999999999986510                   0  000247899


Q ss_pred             EEEEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc
Q 011979          319 FIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC  398 (473)
Q Consensus       319 l~ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~  398 (473)
                      |+|+|+|+..+++++.+++++++++.++++|++.++++.+|+.||++++|..++.++++|++++||||||+|||+++.++
T Consensus       272 l~ivG~G~~~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~  351 (415)
T cd03816         272 CIITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKC  351 (415)
T ss_pred             EEEEecCccHHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCC
Confidence            99999999999999999999998888886669999999999999999986555567889999999999999999999999


Q ss_pred             cccceecCCceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHH
Q 011979          399 IEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL  463 (473)
Q Consensus       399 ~~e~i~~~~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  463 (473)
                      ..|++.++.+|++++|+++++++|.+++++.+ +++.+++|++++++.. +++|+.+|++++-++
T Consensus       352 ~~eiv~~~~~G~lv~d~~~la~~i~~ll~~~~-~~~~~~~m~~~~~~~~-~~~~~~~~~~~~~~~  414 (415)
T cd03816         352 IDELVKHGENGLVFGDSEELAEQLIDLLSNFP-NRGKLNSLKKGAQEES-ELRWDENWDRVVGPL  414 (415)
T ss_pred             HHHHhcCCCCEEEECCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHhh-hcCHHHHHHHHhhhh
Confidence            99999999999999999999999999998410 1789999999999987 999999999988776

The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.

>PLN02275 transferase, transferring glycosyl groups

Probab=100.00  E-value=2.5e-45  Score=378.60  Aligned_cols=371  Identities=79%  Similarity=1.259  Sum_probs=290.4

Q ss_pred             CCCCCeEEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHH
Q 011979            1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL   80 (473)
Q Consensus         1 m~~~~~~~i~~~~~~g~s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~   80 (473)
                      |+.++++.|++++|+|.++|+..++..++++.+++|+|+|+.+.....+.....+|++++++. +.......+..+.+..
T Consensus         1 ~~~~~~~~~~~~~~~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~~~~~~~~v~v~r~~~-~~~~~~~~~~~~~~~~   79 (371)
T PLN02275          1 MGRRGRAAVVVLGDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALLNHPSIHIHLMVQ-PRLLQRLPRVLYALAL   79 (371)
T ss_pred             CCCccEEEEEEecCCCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHhcCCcEEEEECCC-cccccccccchHHHHH
Confidence            899999999999999999999999999999833589999988766555666677899999984 2222234444444445


Q ss_pred             HHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHH
Q 011979           81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIE  160 (473)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e  160 (473)
                      +....+.+..++|.+..+..+||+||+++|+......++++++++.+.|+|+++|+.++............+.+++++++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e  159 (371)
T PLN02275         80 LLKVAIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYE  159 (371)
T ss_pred             HHHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHH
Confidence            55555566666776655568999999999887776667888888888999999999864333222233455567888999


Q ss_pred             HHHhhcCCEEEEcCHHHHHHHHHHhCCceEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccc
Q 011979          161 KYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE  240 (473)
Q Consensus       161 ~~~~~~ad~vi~vS~~~~~~l~~~~g~~~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  240 (473)
                      +.+++.+|.++++|+.+++.+.+.+|.++.++||++.+.|.|.....                                 
T Consensus       160 ~~~~~~ad~ii~~S~~~~~~l~~~~g~~i~vi~n~~~~~f~~~~~~~---------------------------------  206 (371)
T PLN02275        160 RHYGKMADGHLCVTKAMQHELDQNWGIRATVLYDQPPEFFRPASLEI---------------------------------  206 (371)
T ss_pred             HHHHhhCCEEEECCHHHHHHHHHhcCCCeEEECCCCHHHcCcCCchh---------------------------------
Confidence            99999999999999999999988778888899998656665542110                                 


Q ss_pred             hhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEE
Q 011979          241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI  320 (473)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  320 (473)
                                 ...++.+.+++++|++.+.||++.+++|+..+..++.+..+.++          +.+...-..|+++|+
T Consensus       207 -----------~~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~----------~~~~~~~~~~~i~l~  265 (371)
T PLN02275        207 -----------RLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESD----------SASGKQSLYPRLLFI  265 (371)
T ss_pred             -----------cccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhcccccc----------ccccccccCCCeEEE
Confidence                       01122344788999999999999999999988654332211110          000000124789999


Q ss_pred             EEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccc
Q 011979          321 ITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE  400 (473)
Q Consensus       321 ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~  400 (473)
                      |+|+|+.++++++++++++++++.|.++|++.++++.+|+.||++|+|..++.++++|++++||||||+|||+++.++.+
T Consensus       266 ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~  345 (371)
T PLN02275        266 ITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIG  345 (371)
T ss_pred             EEeCCCCHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChH
Confidence            99999999999999999999889998877999999999999999998654456789999999999999999999999999


Q ss_pred             cceecCCceEEeCCHHHHHHHHHHHH
Q 011979          401 ELVKVDKNGLLFSSSSELADQLLMLF  426 (473)
Q Consensus       401 e~i~~~~~G~~~~~~~~la~~i~~l~  426 (473)
                      |+|.++.+|++++|+++++++|.+++
T Consensus       346 eiv~~g~~G~lv~~~~~la~~i~~l~  371 (371)
T PLN02275        346 ELVKDGKNGLLFSSSSELADQLLELL  371 (371)
T ss_pred             HHccCCCCeEEECCHHHHHHHHHHhC
Confidence            99999999999999999999998764

>PRK10307 putative glycosyl transferase; Provisional

Probab=100.00  E-value=2.3e-37  Score=322.77  Aligned_cols=378  Identities=17%  Similarity=0.178  Sum_probs=266.3

Q ss_pred             EEEEE---ecCCCC-ChhHHHHHHHHHhhCCCcEEEEecCCCCCC-----------cccccCCCEEEEEeecCCCCCCCC
Q 011979            7 ACVVV---LGDLGR-SPRMQYQALSLARQMSLEVDVVAYGGSKPH-----------AAILEHPSIHIHTMTQWPTIPRGL   71 (473)
Q Consensus         7 ~~i~~---~~~~g~-s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~-----------~~~~~~~~i~i~~~~~~~~~~~~~   71 (473)
                      ++++.   .++.|+ ..++..++..|.++ ||+|+|+|.....+.           ......+++++++++.+..  ...
T Consensus         3 Ilii~~~~~P~~~g~~~~~~~l~~~L~~~-G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~--~~~   79 (412)
T PRK10307          3 ILVYGINYAPELTGIGKYTGEMAEWLAAR-GHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVP--KQP   79 (412)
T ss_pred             EEEEecCCCCCccchhhhHHHHHHHHHHC-CCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCC--CCc
Confidence            44444   355555 34555678888887 999999996521110           0112256899999884321  111


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhh-hhhcCCCc
Q 011979           72 PKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLL-SLSLGRRS  150 (473)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-~~~~~~~~  150 (473)
                      ....+.... ..+.......+.. ..+ .+||+||++.|+..... ++.+++++.++|+|+++||++.... .....+.+
T Consensus        80 ~~~~~~~~~-~~~~~~~~~~~~~-~~~-~~~Div~~~~p~~~~~~-~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~  155 (412)
T PRK10307         80 SGLKRLLHL-GSFALSSFFPLLA-QRR-WRPDRVIGVVPTLFCAP-GARLLARLSGARTWLHIQDYEVDAAFGLGLLKGG  155 (412)
T ss_pred             cHHHHHHHH-HHHHHHHHHHHhh-ccC-CCCCEEEEeCCcHHHHH-HHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCc
Confidence            111111111 0111110000111 112 68999999987644333 4667778888999999999853221 11111234


Q ss_pred             hHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC---ceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcc
Q 011979          151 HFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQ  226 (473)
Q Consensus       151 ~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g~---~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~  226 (473)
                      .+.++..++++.+.+.||.++++|+.+++.+.+. +.   ++.+++|+.+ +.|.+.....+..++.+++          
T Consensus       156 ~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~-~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~----------  224 (412)
T PRK10307        156 KVARLATAFERSLLRRFDNVSTISRSMMNKAREK-GVAAEKVIFFPNWSEVARFQPVADADVDALRAQLG----------  224 (412)
T ss_pred             HHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHHc-CCCcccEEEECCCcCHhhcCCCCccchHHHHHHcC----------
Confidence            4556677889999999999999999999998764 44   3788999944 5565543222333444443          


Q ss_pred             cccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhh
Q 011979          227 DCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEI  306 (473)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  306 (473)
                                                +++ .+.+++|+|++.+.||++.|++|++.+.+                     
T Consensus       225 --------------------------~~~-~~~~i~~~G~l~~~kg~~~li~a~~~l~~---------------------  256 (412)
T PRK10307        225 --------------------------LPD-GKKIVLYSGNIGEKQGLELVIDAARRLRD---------------------  256 (412)
T ss_pred             --------------------------CCC-CCEEEEEcCccccccCHHHHHHHHHHhcc---------------------
Confidence                                      222 23489999999999999999999998754                     


Q ss_pred             ccCccccCCCEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCC-CCCCCcHHHHHHH
Q 011979          307 SDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMF  385 (473)
Q Consensus       307 ~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s-~~e~~p~kv~Eam  385 (473)
                             .++++|+|+|+|+..++++++++++++++|.|+|. ++.++++.+|+.||++++|.... .+..+|++++|||
T Consensus       257 -------~~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~-~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eam  328 (412)
T PRK10307        257 -------RPDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPL-QPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNML  328 (412)
T ss_pred             -------CCCeEEEEECCChhHHHHHHHHHHcCCCceEEeCC-CCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHH
Confidence                   47899999999999999999999999988999997 99999999999999999953321 1123799999999


Q ss_pred             hcCCcEEEeccCc--cccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHH
Q 011979          386 GCGLPVCAVSYSC--IEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHA  460 (473)
Q Consensus       386 a~G~PvI~~~~~~--~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~  460 (473)
                      |||+|||+|+.+|  ..+++.  ++|++++  |+++++++|.+++++    ++.+++|++++++.. +.|+|+...+++.
T Consensus       329 a~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~----~~~~~~~~~~a~~~~~~~fs~~~~~~~~~  402 (412)
T PRK10307        329 ASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQ----ALLRPKLGTVAREYAERTLDKENVLRQFI  402 (412)
T ss_pred             HcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            9999999998765  457776  6899985  799999999999985    889999999999977 5799998877765


Q ss_pred             HHHH
Q 011979          461 KPLI  464 (473)
Q Consensus       461 ~~~~  464 (473)
                      +.+-
T Consensus       403 ~~~~  406 (412)
T PRK10307        403 ADIR  406 (412)
T ss_pred             HHHH
Confidence            4443

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

Probab=100.00  E-value=1e-36  Score=323.55  Aligned_cols=370  Identities=19%  Similarity=0.219  Sum_probs=263.1

Q ss_pred             CCCCeEEEEEec---CCCC-ChhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHH
Q 011979            2 GRRGRACVVVLG---DLGR-SPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKP   77 (473)
Q Consensus         2 ~~~~~~~i~~~~---~~g~-s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~   77 (473)
                      ++|++++++...   ..|| ..|+...+..|.++ ||+|+|+|.....+  .  ...++.+.....++.+..  ......
T Consensus        57 ~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~-G~eV~vlt~~~~~~--~--~~~g~~v~~~~~~~~~~~--~~~~~~  129 (465)
T PLN02871         57 RPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREM-GDEVLVVTTDEGVP--Q--EFHGAKVIGSWSFPCPFY--QKVPLS  129 (465)
T ss_pred             CCceEEEEECCcCCcccccHHHHHHHHHHHHHHC-CCeEEEEecCCCCC--c--cccCceeeccCCcCCccC--CCceee
Confidence            445555443222   2333 45666777888886 99999999764321  1  224666655542221111  111100


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHH
Q 011979           78 VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYR  157 (473)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~  157 (473)
                      +....++        ...+ +..+||+||+|+|....  ..+.++++..++|+|+++|+....... .. ....+.+...
T Consensus       130 ~~~~~~l--------~~~i-~~~kpDiIh~~~~~~~~--~~~~~~ak~~~ip~V~~~h~~~~~~~~-~~-~~~~~~~~~~  196 (465)
T PLN02871        130 LALSPRI--------ISEV-ARFKPDLIHASSPGIMV--FGALFYAKLLCVPLVMSYHTHVPVYIP-RY-TFSWLVKPMW  196 (465)
T ss_pred             ccCCHHH--------HHHH-HhCCCCEEEECCCchhH--HHHHHHHHHhCCCEEEEEecCchhhhh-cc-cchhhHHHHH
Confidence            0000011        1112 23789999999864322  235556667789999999986422111 01 1122222223


Q ss_pred             HHHHHHhhcCCEEEEcCHHHHHHHHHHh---CCceEEeeCCC-CCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCc
Q 011979          158 WIEKYYGKMANGCLCVTQAMQHELAQNW---GIKATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGM  233 (473)
Q Consensus       158 ~~e~~~~~~ad~vi~vS~~~~~~l~~~~---g~~~~vi~n~~-~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  233 (473)
                      .+++.+.+.+|.++++|+.+++.+.+..   ..++.+++||. .+.|.|...  ..+++.++.                 
T Consensus       197 ~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~--~~~~~~~~~-----------------  257 (465)
T PLN02871        197 DIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFR--SEEMRARLS-----------------  257 (465)
T ss_pred             HHHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccc--cHHHHHHhc-----------------
Confidence            4567788899999999999999998754   23488999994 466765421  122232221                 


Q ss_pred             CCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCcccc
Q 011979          234 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL  313 (473)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (473)
                                        ...++++ +++|+|++.+.||++.++++++.+                              
T Consensus       258 ------------------~~~~~~~-~i~~vGrl~~~K~~~~li~a~~~~------------------------------  288 (465)
T PLN02871        258 ------------------GGEPEKP-LIVYVGRLGAEKNLDFLKRVMERL------------------------------  288 (465)
T ss_pred             ------------------CCCCCCe-EEEEeCCCchhhhHHHHHHHHHhC------------------------------
Confidence                              0122334 899999999999999999988764                              


Q ss_pred             CCCEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEE
Q 011979          314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA  393 (473)
Q Consensus       314 ~~~~~l~ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~  393 (473)
                       ++++|+|+|+|+..+.++++++..   +|.|+|+ ++.+++..+|+.||++|+   +|..|++|++++||||||+|||+
T Consensus       289 -~~~~l~ivG~G~~~~~l~~~~~~~---~V~f~G~-v~~~ev~~~~~~aDv~V~---pS~~E~~g~~vlEAmA~G~PVI~  360 (465)
T PLN02871        289 -PGARLAFVGDGPYREELEKMFAGT---PTVFTGM-LQGDELSQAYASGDVFVM---PSESETLGFVVLEAMASGVPVVA  360 (465)
T ss_pred             -CCcEEEEEeCChHHHHHHHHhccC---CeEEecc-CCHHHHHHHHHHCCEEEE---CCcccccCcHHHHHHHcCCCEEE
Confidence             689999999999888888877653   7999998 999999999999999999   67789999999999999999999


Q ss_pred             eccCccccceec---CCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHh
Q 011979          394 VSYSCIEELVKV---DKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI  468 (473)
Q Consensus       394 ~~~~~~~e~i~~---~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~  468 (473)
                      ++.+|+.|++.+   +.+|++++  |+++++++|.+++++    ++.+++|++++++..++|+|+...+++.+..|.+++
T Consensus       361 s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~----~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~  436 (465)
T PLN02871        361 ARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD----PELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAI  436 (465)
T ss_pred             cCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence            999999999998   99999986  799999999999985    899999999999988899999999998887788777


Q ss_pred             hcc
Q 011979          469 SQF  471 (473)
Q Consensus       469 ~~~  471 (473)
                      ..+
T Consensus       437 ~~~  439 (465)
T PLN02871        437 WFW  439 (465)
T ss_pred             HHH
Confidence            654

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase

Probab=100.00  E-value=1.5e-35  Score=307.55  Aligned_cols=365  Identities=17%  Similarity=0.167  Sum_probs=261.2

Q ss_pred             CCCCh-hHHHHHHHHHhhCCCcEEEEecCCCCCC-cccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHH
Q 011979           15 LGRSP-RMQYQALSLARQMSLEVDVVAYGGSKPH-AAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLL   92 (473)
Q Consensus        15 ~g~s~-r~~~~a~~L~~~~g~eV~vi~~~~~~~~-~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (473)
                      .||.+ .+..++..|.++ ||+|+|+|....... ......+++++++++..+.......+.+..+.   .....   ++
T Consensus        19 ~GG~e~~v~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~   91 (405)
T TIGR03449        19 AGGMNVYILETATELARR-GIEVDIFTRATRPSQPPVVEVAPGVRVRNVVAGPYEGLDKEDLPTQLC---AFTGG---VL   91 (405)
T ss_pred             CCCceehHHHHHHHHhhC-CCEEEEEecccCCCCCCccccCCCcEEEEecCCCcccCCHHHHHHHHH---HHHHH---HH
Confidence            45544 444567788886 999999997543221 12223568999988732211111111111111   11111   11


Q ss_pred             HHHhhh-hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcC-CCchHHHHHHHHHHHHhhcCCEE
Q 011979           93 WFLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG-RRSHFVSIYRWIEKYYGKMANGC  170 (473)
Q Consensus        93 ~~~~~~-~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~ad~v  170 (473)
                      ...+.+ ..++|+||+|.   .....++.++++..++|+|+++|+.+. ....... ...+.....+++++...+.+|.+
T Consensus        92 ~~~~~~~~~~~Diih~h~---~~~~~~~~~~~~~~~~p~v~t~h~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~v  167 (405)
T TIGR03449        92 RAEARHEPGYYDLIHSHY---WLSGQVGWLLRDRWGVPLVHTAHTLAA-VKNAALADGDTPEPEARRIGEQQLVDNADRL  167 (405)
T ss_pred             HHHhhccCCCCCeEEech---HHHHHHHHHHHHhcCCCEEEeccchHH-HHHHhccCCCCCchHHHHHHHHHHHHhcCeE
Confidence            122221 24799999998   333445677777788999999998742 1110110 11122233456678888999999


Q ss_pred             EEcCHHHHHHHHHHhCCc---eEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcc
Q 011979          171 LCVTQAMQHELAQNWGIK---ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL  246 (473)
Q Consensus       171 i~vS~~~~~~l~~~~g~~---~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (473)
                      +++|+..++.+.+.++.+   +.+++||.+ +.|.+.+   +...+.+++                              
T Consensus       168 i~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~---~~~~~~~~~------------------------------  214 (405)
T TIGR03449       168 IANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGD---RATERARLG------------------------------  214 (405)
T ss_pred             EECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCc---HHHHHHhcC------------------------------
Confidence            999999888887767653   789999944 5565442   222333332                              


Q ss_pred             cccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCC--EEEEEEcC
Q 011979          247 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR--LLFIITGK  324 (473)
Q Consensus       247 ~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~ivG~  324 (473)
                            ++++++ +++|+|++.+.||++.+++|+..+.+.                           .|+  ++|+|+|+
T Consensus       215 ------~~~~~~-~i~~~G~l~~~K~~~~li~a~~~l~~~---------------------------~~~~~~~l~ivG~  260 (405)
T TIGR03449       215 ------LPLDTK-VVAFVGRIQPLKAPDVLLRAVAELLDR---------------------------DPDRNLRVIVVGG  260 (405)
T ss_pred             ------CCCCCc-EEEEecCCCcccCHHHHHHHHHHHHhh---------------------------CCCcceEEEEEeC
Confidence                  223333 899999999999999999999998662                           455  99999996


Q ss_pred             ----C-CChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc
Q 011979          325 ----G-PDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC  398 (473)
Q Consensus       325 ----g-~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~  398 (473)
                          | +..++++++++++++ ++|.|+|. ++.+++..+|+.||++++   ||..|++|++++|||++|+|||+++.++
T Consensus       261 ~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~-~~~~~~~~~l~~ad~~v~---ps~~E~~g~~~lEAma~G~Pvi~~~~~~  336 (405)
T TIGR03449       261 PSGSGLATPDALIELAAELGIADRVRFLPP-RPPEELVHVYRAADVVAV---PSYNESFGLVAMEAQACGTPVVAARVGG  336 (405)
T ss_pred             CCCCcchHHHHHHHHHHHcCCCceEEECCC-CCHHHHHHHHHhCCEEEE---CCCCCCcChHHHHHHHcCCCEEEecCCC
Confidence                3 455778999999999 79999998 999999999999999999   6778999999999999999999999999


Q ss_pred             cccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Q 011979          399 IEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITE  466 (473)
Q Consensus       399 ~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  466 (473)
                      ..|++.++.+|++++  |+++++++|.+++++    ++.+++|++++++..++|+|+...+++.+ ++.+
T Consensus       337 ~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~----~~~~~~~~~~~~~~~~~fsw~~~~~~~~~-~y~~  401 (405)
T TIGR03449       337 LPVAVADGETGLLVDGHDPADWADALARLLDD----PRTRIRMGAAAVEHAAGFSWAATADGLLS-SYRD  401 (405)
T ss_pred             cHhhhccCCceEECCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHhCCHHHHHHHHHH-HHHH
Confidence            999999999999986  799999999999985    88899999999988888999988877553 4443

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.7e-35  Score=306.10  Aligned_cols=352  Identities=12%  Similarity=0.062  Sum_probs=249.5

Q ss_pred             cCCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 011979           13 GDLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFML   91 (473)
Q Consensus        13 ~~~g~s~r-~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (473)
                      ++.|++.| +..++..|+++ ||+|+|+|.............+++++++++...  .............. ..+.     
T Consensus        11 p~~GG~e~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~i~v~~~p~~~--~~~~~~~~~~~~~~-~~l~-----   81 (398)
T cd03796          11 PNLGGVETHIYQLSQCLIKR-GHKVVVITHAYGNRVGIRYLTNGLKVYYLPFVV--FYNQSTLPTFFGTF-PLLR-----   81 (398)
T ss_pred             cccccHHHHHHHHHHHHHHc-CCeeEEEeccCCcCCCcccccCceeEEEeccee--ccCCccccchhhhH-HHHH-----
Confidence            45566544 44567888886 999999996533221122335688998887322  11111111111111 1111     


Q ss_pred             HHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEE
Q 011979           92 LWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCL  171 (473)
Q Consensus        92 ~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi  171 (473)
                        ..+ +..+||+||+|++...... .+.++++..++|+|++.|+...      ..  ........++.++..+.+|.++
T Consensus        82 --~~~-~~~~~DiIh~~~~~~~~~~-~~~~~~~~~~~~~v~t~h~~~~------~~--~~~~~~~~~~~~~~~~~~d~ii  149 (398)
T cd03796          82 --NIL-IRERITIVHGHQAFSALAH-EALLHARTMGLKTVFTDHSLFG------FA--DASSIHTNKLLRFSLADVDHVI  149 (398)
T ss_pred             --HHH-HhcCCCEEEECCCCchHHH-HHHHHhhhcCCcEEEEeccccc------cc--chhhHHhhHHHHHhhccCCEEE
Confidence              111 2378999999986543222 3556677778999999998631      11  1111223455677778999999


Q ss_pred             EcCHHHHHHHHHHhCC---ceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccc
Q 011979          172 CVTQAMQHELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLA  247 (473)
Q Consensus       172 ~vS~~~~~~l~~~~g~---~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (473)
                      ++|+..++.+....+.   ++.++|||.+ +.|.+...                                          
T Consensus       150 ~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~------------------------------------------  187 (398)
T cd03796         150 CVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPS------------------------------------------  187 (398)
T ss_pred             EecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCcc------------------------------------------
Confidence            9999998866443443   3789999854 44433210                                          


Q ss_pred             ccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC
Q 011979          248 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD  327 (473)
Q Consensus       248 ~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~  327 (473)
                          . .++...+++|+|++.+.||++.+++|+..+.+                           ..|+++|+|+|+|+.
T Consensus       188 ----~-~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~---------------------------~~~~~~l~i~G~g~~  235 (398)
T cd03796         188 ----K-RDNDKITIVVISRLVYRKGIDLLVGIIPEICK---------------------------KHPNVRFIIGGDGPK  235 (398)
T ss_pred             ----c-CCCCceEEEEEeccchhcCHHHHHHHHHHHHh---------------------------hCCCEEEEEEeCCch
Confidence                0 11123489999999999999999999998876                           368999999999998


Q ss_pred             hHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecC
Q 011979          328 KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD  406 (473)
Q Consensus       328 ~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~  406 (473)
                      .+.++++++++++ ++|.|+|. ++.+++..+|+.||++++   +|..|++|++++||||||+|||+++.++.+|++.++
T Consensus       236 ~~~l~~~~~~~~l~~~v~~~G~-~~~~~~~~~l~~ad~~v~---pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~  311 (398)
T cd03796         236 RILLEEMREKYNLQDRVELLGA-VPHERVRDVLVQGHIFLN---TSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPD  311 (398)
T ss_pred             HHHHHHHHHHhCCCCeEEEeCC-CCHHHHHHHHHhCCEEEe---CChhhccCHHHHHHHHcCCCEEECCCCCchhheeCC
Confidence            8999999999999 78999998 999999999999999999   677899999999999999999999999999999876


Q ss_pred             CceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHHHHHHHHHh
Q 011979          407 KNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAKPLITEVI  468 (473)
Q Consensus       407 ~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~  468 (473)
                      ..++..+|.++++++|.+++++    ......+++++++.. ++|+|+...+++. +++++++
T Consensus       312 ~~~~~~~~~~~l~~~l~~~l~~----~~~~~~~~~~~~~~~~~~fs~~~~~~~~~-~~y~~l~  369 (398)
T cd03796         312 MILLAEPDVESIVRKLEEAISI----LRTGKHDPWSFHNRVKKMYSWEDVAKRTE-KVYDRIL  369 (398)
T ss_pred             ceeecCCCHHHHHHHHHHHHhC----hhhhhhHHHHHHHHHHhhCCHHHHHHHHH-HHHHHHh
Confidence            5544445899999999999985    333434555555543 6899999888865 4444444

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=100.00  E-value=5.1e-35  Score=300.31  Aligned_cols=356  Identities=18%  Similarity=0.190  Sum_probs=256.5

Q ss_pred             CCeEEEEEecCCCCChhHHHH-HHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHH
Q 011979            4 RGRACVVVLGDLGRSPRMQYQ-ALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLL   82 (473)
Q Consensus         4 ~~~~~i~~~~~~g~s~r~~~~-a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~   82 (473)
                      +++++|+...++||++++... +..|.++ |+++.|++..+...........++.+++++.  ..   . ........+.
T Consensus         2 ~~il~ii~~~~~GG~e~~~~~l~~~l~~~-~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~--~~---~-~~~~~~~~l~   74 (374)
T TIGR03088         2 PLIVHVVYRFDVGGLENGLVNLINHLPAD-RYRHAVVALTEVSAFRKRIQRPDVAFYALHK--QP---G-KDVAVYPQLY   74 (374)
T ss_pred             ceEEEEeCCCCCCcHHHHHHHHHhhcccc-ccceEEEEcCCCChhHHHHHhcCceEEEeCC--CC---C-CChHHHHHHH
Confidence            456667777778888887754 5556665 9999999865433322334466889888872  11   1 1111122222


Q ss_pred             HHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeE-EEEecCchhhhhhhhcCCCchHHHHHHHHHH
Q 011979           83 KPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAF-IVDWHNFGYTLLSLSLGRRSHFVSIYRWIEK  161 (473)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~-i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~  161 (473)
                      +.+            +..+||+||+|++...    .+.++++..++|. +++.|....       .........+.++++
T Consensus        75 ~~l------------~~~~~Divh~~~~~~~----~~~~~~~~~~~~~~i~~~h~~~~-------~~~~~~~~~~~~~~~  131 (374)
T TIGR03088        75 RLL------------RQLRPDIVHTRNLAAL----EAQLPAALAGVPARIHGEHGRDV-------FDLDGSNWKYRWLRR  131 (374)
T ss_pred             HHH------------HHhCCCEEEEcchhHH----HHHHHHHhcCCCeEEEeecCccc-------ccchhhHHHHHHHHH
Confidence            222            2378999999985322    2334455555564 455564411       111111123456677


Q ss_pred             HHhhcCCEEEEcCHHHHHHHHHHhCCc---eEEeeCCC-CCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCC
Q 011979          162 YYGKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK  237 (473)
Q Consensus       162 ~~~~~ad~vi~vS~~~~~~l~~~~g~~---~~vi~n~~-~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  237 (473)
                      .+.+.+|.++++|+.+++++.+.++.+   +.+++|+. .+.|.+... .+...+...                      
T Consensus       132 ~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~-~~~~~~~~~----------------------  188 (374)
T TIGR03088       132 LYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRG-DRSPILPPD----------------------  188 (374)
T ss_pred             HHHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCcc-chhhhhHhh----------------------
Confidence            777889999999999999998877654   68899994 455654421 111111110                      


Q ss_pred             ccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCE
Q 011979          238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL  317 (473)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (473)
                                     ..++.+.+++|+||+.+.||++.+++|+..+.++.                       +-..+++
T Consensus       189 ---------------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~-----------------------~~~~~~~  230 (374)
T TIGR03088       189 ---------------FFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQL-----------------------PEGAERL  230 (374)
T ss_pred             ---------------cCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhC-----------------------cccccce
Confidence                           11223449999999999999999999999987630                       0012479


Q ss_pred             EEEEEcCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc
Q 011979          318 LFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY  396 (473)
Q Consensus       318 ~l~ivG~g~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~  396 (473)
                      +|+++|+|+..+.+++.++++++ +++.|.|.   .+|+..+|+.||++|+   ||..|+||++++|||+||+|||+|+.
T Consensus       231 ~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~v~---pS~~Eg~~~~~lEAma~G~Pvv~s~~  304 (374)
T TIGR03088       231 RLVIVGDGPARGACEQMVRAAGLAHLVWLPGE---RDDVPALMQALDLFVL---PSLAEGISNTILEAMASGLPVIATAV  304 (374)
T ss_pred             EEEEecCCchHHHHHHHHHHcCCcceEEEcCC---cCCHHHHHHhcCEEEe---ccccccCchHHHHHHHcCCCEEEcCC
Confidence            99999999988999999999999 68889887   7899999999999999   68889999999999999999999999


Q ss_pred             CccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHH
Q 011979          397 SCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHA  460 (473)
Q Consensus       397 ~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~  460 (473)
                      ++..|++.++.+|++++  |+++++++|..++++    ++.+.++++++++.. +.|+|+...+++.
T Consensus       305 ~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~----~~~~~~~~~~a~~~~~~~fs~~~~~~~~~  367 (374)
T TIGR03088       305 GGNPELVQHGVTGALVPPGDAVALARALQPYVSD----PAARRAHGAAGRARAEQQFSINAMVAAYA  367 (374)
T ss_pred             CCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            99999999999999985  799999999999885    888999999998876 6899998877744

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.8e-35  Score=301.60  Aligned_cols=365  Identities=18%  Similarity=0.206  Sum_probs=252.0

Q ss_pred             CCeEEEEEecCCCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCCc-ccccCCCEEEEEeecCCCCCCCCcchhHHHHHH
Q 011979            4 RGRACVVVLGDLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHA-AILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLL   81 (473)
Q Consensus         4 ~~~~~i~~~~~~g~s~r~-~~~a~~L~~~~g~eV~vi~~~~~~~~~-~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~   81 (473)
                      ||++++...-..||++|+ ..+|..|+++ ||+|+|+|........ ......++.++....+. +.....+    ...+
T Consensus         1 mkIl~~~~~~~~gG~e~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~----~~~~   74 (392)
T cd03805           1 LRVAFIHPDLGIGGAERLVVDAALALQSR-GHEVTIYTSHHDPSHCFEETKDGTLPVRVRGDWL-PRSIFGR----FHIL   74 (392)
T ss_pred             CeEEEECCCCCCchHHHHHHHHHHHHHhC-CCeEEEEcCCCCchhcchhccCCeeEEEEEeEEE-cchhhHh----HHHH
Confidence            344444433346777776 5678888887 9999999965322111 11122236555554211 1111111    1111


Q ss_pred             HHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchH----HHHHH
Q 011979           82 LKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF----VSIYR  157 (473)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~----~~~~~  157 (473)
                      ...+......++....+..++|+||++..   ...  ..+.....+.|++++.|.... ..   ....+..    .....
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~---~~~--~~~~~~~~~~~~i~~~h~~~~-~~---~~~~~~~~~~~~~~~~  145 (392)
T cd03805          75 CAYLRMLYLALYLLLLPDEKYDVFIVDQV---SAC--VPLLKLFSPSKILFYCHFPDQ-LL---AQRGSLLKRLYRKPFD  145 (392)
T ss_pred             HHHHHHHHHHHHHHhcccCCCCEEEEcCc---chH--HHHHHHhcCCcEEEEEecChH-Hh---cCCCcHHHHHHHHHHH
Confidence            11111111111111234478999999873   222  112233344899999995421 11   1122222    23456


Q ss_pred             HHHHHHhhcCCEEEEcCHHHHHHHHHHhCCc----eEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCC
Q 011979          158 WIEKYYGKMANGCLCVTQAMQHELAQNWGIK----ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG  232 (473)
Q Consensus       158 ~~e~~~~~~ad~vi~vS~~~~~~l~~~~g~~----~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~  232 (473)
                      ++|+...+.||.++++|+.+++.+.+.++..    ..+++|+.+ +.|.+...+.   .....                 
T Consensus       146 ~~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~---~~~~~-----------------  205 (392)
T cd03805         146 WLEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDP---DPGLL-----------------  205 (392)
T ss_pred             HHHHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCcccccc---ccccc-----------------
Confidence            7889999999999999999999998766532    348899843 5554432110   00000                 


Q ss_pred             cCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccc
Q 011979          233 MEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQY  312 (473)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (473)
                                         ...+ ....++|+|++.+.||++.+++|+..+.++                          
T Consensus       206 -------------------~~~~-~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~--------------------------  239 (392)
T cd03805         206 -------------------IPKS-GKKTFLSINRFERKKNIALAIEAFAILKDK--------------------------  239 (392)
T ss_pred             -------------------ccCC-CceEEEEEeeecccCChHHHHHHHHHHHhh--------------------------
Confidence                               1122 334899999999999999999999999773                          


Q ss_pred             cC---CCEEEEEEcCCCCh--------HHHHHHHHH-cCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcH
Q 011979          313 LY---PRLLFIITGKGPDK--------ESYEEKIRR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPM  379 (473)
Q Consensus       313 ~~---~~~~l~ivG~g~~~--------~~l~~~~~~-~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~  379 (473)
                       .   |+++|+++|+|+..        +++++.+++ +++ ++|.|+|+ ++.+++..+|+.||++++   +|..|+||+
T Consensus       240 -~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~-~~~~~~~~~l~~ad~~l~---~s~~E~~g~  314 (392)
T cd03805         240 -LAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPS-ISDSQKELLLSSARALLY---TPSNEHFGI  314 (392)
T ss_pred             -cccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCC-CChHHHHHHHhhCeEEEE---CCCcCCCCc
Confidence             3   78999999998653        678888998 888 79999998 999999999999999999   677899999


Q ss_pred             HHHHHHhcCCcEEEeccCccccceecCCceEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHH
Q 011979          380 KVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWE  457 (473)
Q Consensus       380 kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~  457 (473)
                      +++||||||+|||+++.++..|++.++.+|++++ |+++++++|.+++++    ++.+++|++++++.. ++|+|+...+
T Consensus       315 ~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~~~~~~a~~i~~l~~~----~~~~~~~~~~a~~~~~~~~s~~~~~~  390 (392)
T cd03805         315 VPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEPTPEEFAEAMLKLAND----PDLADRMGAAGRKRVKEKFSTEAFAE  390 (392)
T ss_pred             hHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCCCHHHHHHHHHHHHhC----hHHHHHHHHHHHHHHHHhcCHHHHhh
Confidence            9999999999999999999999999999999986 799999999999985    788999999998866 6799987765


Q ss_pred             H
Q 011979          458 E  458 (473)
Q Consensus       458 ~  458 (473)
                      +
T Consensus       391 ~  391 (392)
T cd03805         391 R  391 (392)
T ss_pred             h
Confidence            4

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain

Probab=100.00  E-value=8.7e-34  Score=299.00  Aligned_cols=363  Identities=19%  Similarity=0.122  Sum_probs=240.2

Q ss_pred             hHHHHHHHHHhhCCC--cEEEEecCCCCC-------CcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 011979           20 RMQYQALSLARQMSL--EVDVVAYGGSKP-------HAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFM   90 (473)
Q Consensus        20 r~~~~a~~L~~~~g~--eV~vi~~~~~~~-------~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (473)
                      .+..++..|+++ ||  +|+|+|......       .......+|+++++++..+  ..... .......+......   
T Consensus        31 ~v~~La~~L~~~-G~~~~V~v~t~~~~~~~~~~~~~~~~~~~~~gv~v~r~~~~~--~~~~~-~~~~~~~~~~~~~~---  103 (439)
T TIGR02472        31 YVLELARALARR-SEVEQVDLVTRLIKDAKVSPDYAQPIERIAPGARIVRLPFGP--RRYLR-KELLWPYLDELADN---  103 (439)
T ss_pred             HHHHHHHHHHhC-CCCcEEEEEeccccCcCCCCccCCCeeEeCCCcEEEEecCCC--CCCcC-hhhhhhhHHHHHHH---
Confidence            445567788886 97  999999542110       1111225799999998322  11111 11111111111111   


Q ss_pred             HHHHHhhh-hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcC---CCchHHHH---H--HHHHH
Q 011979           91 LLWFLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG---RRSHFVSI---Y--RWIEK  161 (473)
Q Consensus        91 ~~~~~~~~-~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~---~~~~~~~~---~--~~~e~  161 (473)
                      +. ..+.+ ..+||+||+|.+   ....++.++++..++|+|++.|+.+.........   ....+.+.   .  ...++
T Consensus       104 l~-~~~~~~~~~~DvIH~h~~---~~~~~~~~~~~~~~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (439)
T TIGR02472       104 LL-QHLRQQGHLPDLIHAHYA---DAGYVGARLSRLLGVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEE  179 (439)
T ss_pred             HH-HHHHHcCCCCCEEEEcch---hHHHHHHHHHHHhCCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHH
Confidence            11 11222 137999999983   3444577777778899999999864211100000   00111111   1  12477


Q ss_pred             HHhhcCCEEEEcCHHHHHHH-HHHhC---CceEEeeCC-CCCCcccCChh-HHHHHHHhhhhhccCCCCcccccCCCcCC
Q 011979          162 YYGKMANGCLCVTQAMQHEL-AQNWG---IKATVLYDQ-PPEFFHPTSLE-EKHELFCRLNKILHQPLGVQDCVSNGMEG  235 (473)
Q Consensus       162 ~~~~~ad~vi~vS~~~~~~l-~~~~g---~~~~vi~n~-~~~~f~~~~~~-~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  235 (473)
                      ..++.+|.++++|+...... ....+   .++.+|||| +.+.|.|.... ....++..+...                 
T Consensus       180 ~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~-----------------  242 (439)
T TIGR02472       180 ETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPF-----------------  242 (439)
T ss_pred             HHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHhh-----------------
Confidence            78889999999997654333 32223   248899999 44667664221 111222111100                 


Q ss_pred             CCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCC
Q 011979          236 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP  315 (473)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (473)
                                      ...++.+ +++|+||+.+.||++.|++|++.+.+.                    .     ..+
T Consensus       243 ----------------~~~~~~~-~i~~vGrl~~~Kg~~~li~A~~~l~~~--------------------~-----~~~  280 (439)
T TIGR02472       243 ----------------LKDPEKP-PILAISRPDRRKNIPSLVEAYGRSPKL--------------------Q-----EMA  280 (439)
T ss_pred             ----------------ccccCCc-EEEEEcCCcccCCHHHHHHHHHhChhh--------------------h-----hhc
Confidence                            1123333 899999999999999999999875321                    0     023


Q ss_pred             CEEEEEEcCCCChH-----------HHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcC----cEEEEeccCCCCCCCcH
Q 011979          316 RLLFIITGKGPDKE-----------SYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSA----DLGVCLHTSSSGLDLPM  379 (473)
Q Consensus       316 ~~~l~ivG~g~~~~-----------~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~a----di~v~~~~~s~~e~~p~  379 (473)
                      ++. +|+|+|++.+           .++++++++++ ++|.|.|. ++.++++.+|+.|    |++|+   ||..|+||+
T Consensus       281 ~l~-li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~-~~~~~~~~~~~~a~~~~Dv~v~---pS~~E~fg~  355 (439)
T TIGR02472       281 NLV-LVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKH-HRPDDVPELYRLAARSRGIFVN---PALTEPFGL  355 (439)
T ss_pred             cEE-EEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCC-CCHHHHHHHHHHHhhcCCEEec---ccccCCccc
Confidence            443 3678886532           23456788888 79999998 8999999999987    99999   788899999


Q ss_pred             HHHHHHhcCCcEEEeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHH
Q 011979          380 KVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEW  456 (473)
Q Consensus       380 kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~  456 (473)
                      +++||||||+|||+|+.+|+.|++.++.+|++++  |+++++++|.+++++    ++.+++|++++++.. ++|+|+...
T Consensus       356 ~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~----~~~~~~~~~~a~~~~~~~fsw~~~~  431 (439)
T TIGR02472       356 TLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSD----SSQWQLWSRNGIEGVRRHYSWDAHV  431 (439)
T ss_pred             HHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhCCHHHHH
Confidence            9999999999999999999999999999999985  799999999999985    889999999998865 679998877


Q ss_pred             HHHHH
Q 011979          457 EEHAK  461 (473)
Q Consensus       457 ~~~~~  461 (473)
                      +++..
T Consensus       432 ~~~~~  436 (439)
T TIGR02472       432 EKYLR  436 (439)
T ss_pred             HHHHH
Confidence            76543

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=9.7e-34  Score=288.87  Aligned_cols=353  Identities=18%  Similarity=0.228  Sum_probs=250.8

Q ss_pred             eEEEEEecCCCCChhHHHH-HHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHH
Q 011979            6 RACVVVLGDLGRSPRMQYQ-ALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP   84 (473)
Q Consensus         6 ~~~i~~~~~~g~s~r~~~~-a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (473)
                      +++++..+.+||.+++... +..|.++ ||+|+|+|.....  ......+++.++.++....+   .........   ..
T Consensus         2 ki~~~~~p~~gG~~~~~~~la~~L~~~-G~~v~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~   72 (371)
T cd04962           2 KIGIVCYPTYGGSGVVATELGKALARR-GHEVHFITSSRPF--RLDEYSPNIFFHEVEVPQYP---LFQYPPYDL---AL   72 (371)
T ss_pred             ceeEEEEeCCCCccchHHHHHHHHHhc-CCceEEEecCCCc--chhhhccCeEEEEecccccc---hhhcchhHH---HH
Confidence            3555667788888877754 5677776 9999999965321  11122446665544411110   000000000   01


Q ss_pred             HHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhh---CCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHH
Q 011979           85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL---RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEK  161 (473)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~---~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~  161 (473)
                      ..    .+..++ +..+||+||+|.+.  +....+.+..+.   .++|+|++.|+......    +..    ..++++.+
T Consensus        73 ~~----~l~~~i-~~~~~divh~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~----~~~----~~~~~~~~  137 (371)
T cd04962          73 AS----KIAEVA-KRYKLDLLHVHYAV--PHAVAAYLAREILGKKDLPVVTTLHGTDITLV----GQD----PSFQPATR  137 (371)
T ss_pred             HH----HHHHHH-hcCCccEEeecccC--CccHHHHHHHHhcCcCCCcEEEEEcCCccccc----ccc----ccchHHHH
Confidence            11    111222 23789999998743  222223333332   37999999997632111    111    11234566


Q ss_pred             HHhhcCCEEEEcCHHHHHHHHHHhCC--ceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCc
Q 011979          162 YYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA  238 (473)
Q Consensus       162 ~~~~~ad~vi~vS~~~~~~l~~~~g~--~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  238 (473)
                      ...+.+|.++++|+.+++.+.+.++.  ++.+++|+.+ ..|.+...   ...+.+++                      
T Consensus       138 ~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~~~---~~~~~~~~----------------------  192 (371)
T cd04962         138 FSIEKSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPKPD---EALKRRLG----------------------  192 (371)
T ss_pred             HHHhhCCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCCch---HHHHHhcC----------------------
Confidence            77788999999999999998876543  3789999844 33433321   11222221                      


Q ss_pred             cchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEE
Q 011979          239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL  318 (473)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (473)
                                    ..++. .+++|+|++.+.||++.+++|+..+.+                            .++++
T Consensus       193 --------------~~~~~-~~il~~g~l~~~K~~~~li~a~~~l~~----------------------------~~~~~  229 (371)
T cd04962         193 --------------APEGE-KVLIHISNFRPVKRIDDVIRIFAKVRK----------------------------EVPAR  229 (371)
T ss_pred             --------------CCCCC-eEEEEecccccccCHHHHHHHHHHHHh----------------------------cCCce
Confidence                          22233 389999999999999999999999876                            25689


Q ss_pred             EEEEcCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC
Q 011979          319 FIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS  397 (473)
Q Consensus       319 l~ivG~g~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~  397 (473)
                      ++++|.|++.+.+++.++++++ ++|.|.|.   .+++..+|+.||++|+   ||..|++|++++|||+||+|||+++.+
T Consensus       230 l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~~d~~v~---ps~~E~~~~~~~EAma~g~PvI~s~~~  303 (371)
T cd04962         230 LLLVGDGPERSPAERLARELGLQDDVLFLGK---QDHVEELLSIADLFLL---PSEKESFGLAALEAMACGVPVVASNAG  303 (371)
T ss_pred             EEEEcCCcCHHHHHHHHHHcCCCceEEEecC---cccHHHHHHhcCEEEe---CCCcCCCccHHHHHHHcCCCEEEeCCC
Confidence            9999999999999999999998 78999998   5789999999999999   677899999999999999999999999


Q ss_pred             ccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh-ccccchHHHHHHHH
Q 011979          398 CIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM-GLSARWATEWEEHA  460 (473)
Q Consensus       398 ~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~~~~~~  460 (473)
                      +..|++.++.+|++++  |+++++++|.+++++    ++.+++|++++++. .+.++|+...+++.
T Consensus       304 ~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~----~~~~~~~~~~~~~~~~~~fs~~~~~~~~~  365 (371)
T cd04962         304 GIPEVVKHGETGFLVDVGDVEAMAEYALSLLED----DELWQEFSRAARNRAAERFDSERIVPQYE  365 (371)
T ss_pred             CchhhhcCCCceEEcCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            9999999999999996  799999999999985    88999999999987 47899887776644

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional

Probab=100.00  E-value=5.1e-33  Score=290.42  Aligned_cols=273  Identities=19%  Similarity=0.222  Sum_probs=213.0

Q ss_pred             hhCCCCEEEEeCCCchhHHHHHHHHHh--hCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCH
Q 011979           98 KIASPDVFLVQNPPSVPTLVAVKWASS--LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ  175 (473)
Q Consensus        98 ~~~~~Dvi~~~~p~~~~~~~~~~~~~~--~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~  175 (473)
                      +..++|+||+|..+.   ...+.+++.  ..+.|+++++|+...       .... ....++...+...+.+|.++++|+
T Consensus       115 ~~~~~diihaH~~~~---~~~~~~~~~~~~~~~~~~~t~Hg~d~-------~~~~-~~~~~~~~~~~~~~~ad~vv~~S~  183 (406)
T PRK15427        115 TPFVADVFIAHFGPA---GVTAAKLRELGVLRGKIATIFHGIDI-------SSRE-VLNHYTPEYQQLFRRGDLMLPISD  183 (406)
T ss_pred             ccCCCCEEEEcCChH---HHHHHHHHHhCCCCCCeEEEEccccc-------ccch-hhhhhhHHHHHHHHhCCEEEECCH
Confidence            346899999998432   223344443  234567889997621       1111 111112234445678999999999


Q ss_pred             HHHHHHHHHhCCc---eEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccccccc
Q 011979          176 AMQHELAQNWGIK---ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV  251 (473)
Q Consensus       176 ~~~~~l~~~~g~~---~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (473)
                      ..++.+.+ +|.+   +.+++||.+ +.|.+...                                              
T Consensus       184 ~~~~~l~~-~g~~~~ki~vi~nGvd~~~f~~~~~----------------------------------------------  216 (406)
T PRK15427        184 LWAGRLQK-MGCPPEKIAVSRMGVDMTRFSPRPV----------------------------------------------  216 (406)
T ss_pred             HHHHHHHH-cCCCHHHEEEcCCCCCHHHcCCCcc----------------------------------------------
Confidence            99999976 4653   789999954 44533210                                              


Q ss_pred             ccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHH
Q 011979          252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY  331 (473)
Q Consensus       252 ~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l  331 (473)
                       ..++.+..++|+|++.+.||++.+++|++.+.++                           .++++++|+|+|+..+++
T Consensus       217 -~~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~l~ivG~G~~~~~l  268 (406)
T PRK15427        217 -KAPATPLEIISVARLTEKKGLHVAIEACRQLKEQ---------------------------GVAFRYRILGIGPWERRL  268 (406)
T ss_pred             -ccCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhh---------------------------CCCEEEEEEECchhHHHH
Confidence             0122345899999999999999999999998773                           688999999999999999


Q ss_pred             HHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCC---CCCCCcHHHHHHHhcCCcEEEeccCccccceecCC
Q 011979          332 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS---SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK  407 (473)
Q Consensus       332 ~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s---~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~  407 (473)
                      ++.++++++ ++|.|+|. ++++++.++|+.||++|+|....   ..|++|++++||||||+|||+|+.+|+.|++.++.
T Consensus       269 ~~~~~~~~l~~~V~~~G~-~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~  347 (406)
T PRK15427        269 RTLIEQYQLEDVVEMPGF-KPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADK  347 (406)
T ss_pred             HHHHHHcCCCCeEEEeCC-CCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCC
Confidence            999999999 79999987 99999999999999999953221   14899999999999999999999999999999999


Q ss_pred             ceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHH
Q 011979          408 NGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHA  460 (473)
Q Consensus       408 ~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~  460 (473)
                      +|++++  |+++++++|.++++.   |++.+++|++++++.. ++|+|+...++..
T Consensus       348 ~G~lv~~~d~~~la~ai~~l~~~---d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~  400 (406)
T PRK15427        348 SGWLVPENDAQALAQRLAAFSQL---DTDELAPVVKRAREKVETDFNQQVINRELA  400 (406)
T ss_pred             ceEEeCCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            999996  799999999999983   4889999999999877 6799887776644

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5.1e-33  Score=285.59  Aligned_cols=361  Identities=20%  Similarity=0.202  Sum_probs=254.3

Q ss_pred             CCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCCcc-cccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 011979           14 DLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAA-ILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFML   91 (473)
Q Consensus        14 ~~g~s~r-~~~~a~~L~~~~g~eV~vi~~~~~~~~~~-~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (473)
                      +.||.++ +...+..|++. ||+|+|++......... ....+++.+++++..+  ....++. ............    
T Consensus        19 ~~GG~~~~~~~l~~~L~~~-g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~----   90 (398)
T cd03800          19 DTGGQNVYVLELARALARL-GHEVDIFTRRIDDALPPIVELAPGVRVVRVPAGP--AEYLPKE-ELWPYLDEFADD----   90 (398)
T ss_pred             CCCceeehHHHHHHHHhcc-CceEEEEEecCCcccCCccccccceEEEeccccc--ccCCChh-hcchhHHHHHHH----
Confidence            3566554 45677888886 99999999654432211 2345688888887321  1111110 011111111111    


Q ss_pred             HHHHhhhh-CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEE
Q 011979           92 LWFLCVKI-ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGC  170 (473)
Q Consensus        92 ~~~~~~~~-~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~v  170 (473)
                      +...+.+. .+||+||++.+.   ...++..+++..++|+|++.|+.......................++.+.+.+|.+
T Consensus        91 ~~~~~~~~~~~~Div~~~~~~---~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i  167 (398)
T cd03800          91 LLRFLRREGGRPDLIHAHYWD---SGLVALLLARRLGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRV  167 (398)
T ss_pred             HHHHHHhcCCCccEEEEecCc---cchHHHHHHhhcCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEE
Confidence            11122221 289999999742   33346666777889999999987421110000011101122345678888899999


Q ss_pred             EEcCHHHHHHHHHHhCCc---eEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcc
Q 011979          171 LCVTQAMQHELAQNWGIK---ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL  246 (473)
Q Consensus       171 i~vS~~~~~~l~~~~g~~---~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (473)
                      +++|+..++.+.+.++.+   +.+++|+.+ +.|.+.....  ..+..++                              
T Consensus       168 i~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~--~~~~~~~------------------------------  215 (398)
T cd03800         168 IASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAE--ARRARLL------------------------------  215 (398)
T ss_pred             EEcCHHHHHHHHHHccccccccEEECCCCCccceecccchh--hHHHhhc------------------------------
Confidence            999999999998876543   678999843 5554432111  0011111                              


Q ss_pred             cccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCC
Q 011979          247 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP  326 (473)
Q Consensus       247 ~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~  326 (473)
                            .++++ .+++|+|++.+.||++.+++|+..+.++                           .++++|+++|+|+
T Consensus       216 ------~~~~~-~~i~~~gr~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~l~i~G~~~  261 (398)
T cd03800         216 ------RDPDK-PRILAVGRLDPRKGIDTLIRAYAELPEL---------------------------RERANLVIVGGPR  261 (398)
T ss_pred             ------cCCCC-cEEEEEcccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEECCC
Confidence                  12233 3899999999999999999999999773                           5789999999886


Q ss_pred             Ch------HHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCcc
Q 011979          327 DK------ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI  399 (473)
Q Consensus       327 ~~------~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~  399 (473)
                      ..      ..+++.++.+++ ++|.|+|. ++.+++..+++.||++++   ||..|++|++++|||+||+|||+++.++.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~adi~l~---ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~  337 (398)
T cd03800         262 DDILAMDEEELRELARELGVIDRVDFPGR-VSREDLPALYRAADVFVN---PALYEPFGLTALEAMACGLPVVATAVGGP  337 (398)
T ss_pred             CcchhhhhHHHHHHHHhcCCCceEEEecc-CCHHHHHHHHHhCCEEEe---cccccccCcHHHHHHhcCCCEEECCCCCH
Confidence            42      345677888888 79999998 999999999999999999   67789999999999999999999999999


Q ss_pred             ccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHH
Q 011979          400 EELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEH  459 (473)
Q Consensus       400 ~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~  459 (473)
                      .+++.++++|++++  |+++++++|.+++++    ++.+++|++++++.. ++++|+...+++
T Consensus       338 ~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~----~~~~~~~~~~a~~~~~~~~s~~~~~~~~  396 (398)
T cd03800         338 RDIVVDGVTGLLVDPRDPEALAAALRRLLTD----PALRRRLSRAGLRRARARYTWERVAARL  396 (398)
T ss_pred             HHHccCCCCeEEeCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence            99999999999996  699999999999985    889999999999887 789988776654

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1e-32  Score=286.44  Aligned_cols=357  Identities=16%  Similarity=0.146  Sum_probs=240.4

Q ss_pred             hhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhh
Q 011979           19 PRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVK   98 (473)
Q Consensus        19 ~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (473)
                      +....+|..|+++ ||+|+++|.......+.     |+++++++..+..........................+..+..+
T Consensus        11 ~~~~~la~~L~~~-G~~v~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (396)
T cd03818          11 GQFRHLAPALAAQ-GHEVVFLTEPNAAPPPG-----GVRVVRYRPPRGPTSGTHPYLREFEEAVLRGQAVARALLALRAK   84 (396)
T ss_pred             hhHHHHHHHHHHC-CCEEEEEecCCCCCCCC-----CeeEEEecCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhc
Confidence            3456788999997 99999999876542211     79999988432211111111111111111111222223333333


Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhh--cC---CCch--HH--HHHHHHHHHHhhcCCE
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLS--LG---RRSH--FV--SIYRWIEKYYGKMANG  169 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~--~~---~~~~--~~--~~~~~~e~~~~~~ad~  169 (473)
                      ..+||+||+|..+..  .  ..+.....++|+|...|-+. ......  +.   ....  ..  +...++.....+.+|.
T Consensus        85 ~~~pdvi~~h~~~~~--~--~~l~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~  159 (396)
T cd03818          85 GFRPDVIVAHPGWGE--T--LFLKDVWPDAPLIGYFEFYY-RAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADA  159 (396)
T ss_pred             CCCCCEEEECCccch--h--hhHHHhCCCCCEEEEEeeee-cCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCE
Confidence            457999999984321  1  11222235688877554221 110000  00   1111  01  1112224566788999


Q ss_pred             EEEcCHHHHHHHHHHhCCceEEeeCCC-CCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccc
Q 011979          170 CLCVTQAMQHELAQNWGIKATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAG  248 (473)
Q Consensus       170 vi~vS~~~~~~l~~~~g~~~~vi~n~~-~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (473)
                      +|++|+.+++.+.+.++.++.+|+||. .+.|.+.... ........                                 
T Consensus       160 vi~~s~~~~~~~~~~~~~ki~vI~ngvd~~~f~~~~~~-~~~~~~~~---------------------------------  205 (396)
T cd03818         160 GVSPTRWQRSTFPAELRSRISVIHDGIDTDRLRPDPQA-RLRLPNGR---------------------------------  205 (396)
T ss_pred             EECCCHHHHhhCcHhhccceEEeCCCccccccCCCchh-hhcccccc---------------------------------
Confidence            999999999998877777799999994 4667654211 11000000                                 


Q ss_pred             cccccCCCCCeEEEEEee-ccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC
Q 011979          249 IDVFLKPNRPALVVSSTS-WTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD  327 (473)
Q Consensus       249 ~~~~~~~~~~~~i~~~G~-~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~  327 (473)
                         .+.++.+ +++|+|| +.+.||++.+++|+..+.++                           .|+++|+|+|++..
T Consensus       206 ---~~~~~~~-~i~~vgR~l~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~lvivG~~~~  254 (396)
T cd03818         206 ---VLTPGDE-VITFVARNLEPYRGFHVFMRALPRLLRA---------------------------RPDARVVIVGGDGV  254 (396)
T ss_pred             ---cCCCCCe-EEEEECCCcccccCHHHHHHHHHHHHHH---------------------------CCCcEEEEEcCCCc
Confidence               1123333 8999997 99999999999999998773                           68999999997421


Q ss_pred             --------hH-HHHHHHHHcC----CCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe
Q 011979          328 --------KE-SYEEKIRRLR----LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV  394 (473)
Q Consensus       328 --------~~-~l~~~~~~~~----l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~  394 (473)
                              .+ ..++.+++++    .++|.|+|. +|.+++..+|+.||++++   +|..+++|++++||||||+|||+|
T Consensus       255 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~-v~~~~~~~~l~~adv~v~---~s~~e~~~~~llEAmA~G~PVIas  330 (396)
T cd03818         255 SYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGR-VPYDQYLALLQVSDVHVY---LTYPFVLSWSLLEAMACGCLVVGS  330 (396)
T ss_pred             ccCCCCCCcccHHHHHHHHhhcccCcceEEEeCC-CCHHHHHHHHHhCcEEEE---cCcccccchHHHHHHHCCCCEEEc
Confidence                    11 2233344433    479999998 999999999999999999   677889999999999999999999


Q ss_pred             ccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccc-cchHHHHHHH
Q 011979          395 SYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS-ARWATEWEEH  459 (473)
Q Consensus       395 ~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~w~~~~~~~  459 (473)
                      +.++..|++.++.+|++++  |+++++++|.+++++    ++.+++|++++++.+.+ |+|+...++.
T Consensus       331 ~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~----~~~~~~l~~~ar~~~~~~fs~~~~~~~~  394 (396)
T cd03818         331 DTAPVREVITDGENGLLVDFFDPDALAAAVIELLDD----PARRARLRRAARRTALRYDLLSVCLPRQ  394 (396)
T ss_pred             CCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence            9999999999999999986  799999999999985    88999999999998844 8887766554

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.1e-32  Score=274.10  Aligned_cols=361  Identities=23%  Similarity=0.301  Sum_probs=259.6

Q ss_pred             CCChhHHHHHHHHHhhCCCcEEEEecCCCCCCccc------ccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHH
Q 011979           16 GRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAI------LEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFF   89 (473)
Q Consensus        16 g~s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~------~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (473)
                      |...++...+..|+++ ||+|++++..........      ....+++++.++......   ......+.........  
T Consensus        15 G~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--   88 (394)
T cd03794          15 GGAFRTTELAEELVKR-GHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPYKK---NGLLKRLLNYLSFALS--   88 (394)
T ss_pred             CcceeHHHHHHHHHhC-CceEEEEecCCCcccccccccceEEecCCeEEEEEecCCCCc---cchHHHHHhhhHHHHH--
Confidence            5566777788889887 999999997644333222      234688888888432211   1111111111111111  


Q ss_pred             HHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhc-CC-CchHHHHHHHHHHHHhhcC
Q 011979           90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSL-GR-RSHFVSIYRWIEKYYGKMA  167 (473)
Q Consensus        90 ~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~-~~~~~~~~~~~e~~~~~~a  167 (473)
                       ....+..+..+||+||++.++.. ....+...++..++|+++++|+.+........ .. .....+..+++++...+.+
T Consensus        89 -~~~~~~~~~~~~D~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (394)
T cd03794          89 -ALLALLKRRRRPDVIIATSPPLL-IALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRA  166 (394)
T ss_pred             -HHHHHHhcccCCCEEEEcCChHH-HHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcC
Confidence             11122213578999999984433 33346666666789999999997532221111 11 2222256778889999999


Q ss_pred             CEEEEcCHHHHHHHHHHhCC---ceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhh
Q 011979          168 NGCLCVTQAMQHELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIF  243 (473)
Q Consensus       168 d~vi~vS~~~~~~l~~~~g~---~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (473)
                      |.++++|+.+++.+.. ++.   ++.+++|+.+ ..+.+......   +..+                            
T Consensus       167 d~vi~~s~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~----------------------------  214 (394)
T cd03794         167 DAIVVISPGMREYLVR-RGVPPEKISVIPNGVDLELFKPPPADES---LRKE----------------------------  214 (394)
T ss_pred             CEEEEECHHHHHHHHh-cCCCcCceEEcCCCCCHHHcCCccchhh---hhhc----------------------------
Confidence            9999999999998873 343   3788888844 33433221110   1111                            


Q ss_pred             hcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEc
Q 011979          244 TSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG  323 (473)
Q Consensus       244 ~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG  323 (473)
                               .....+..++++|++...||++.+++|+..+.+                           . ++++|+|+|
T Consensus       215 ---------~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~---------------------------~-~~~~l~i~G  257 (394)
T cd03794         215 ---------LGLDDKFVVLYAGNIGRAQGLDTLLEAAALLKD---------------------------R-PDIRFLIVG  257 (394)
T ss_pred             ---------cCCCCcEEEEEecCcccccCHHHHHHHHHHHhh---------------------------c-CCeEEEEeC
Confidence                     122234589999999999999999999999876                           2 689999999


Q ss_pred             CCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCC--CCCCcHHHHHHHhcCCcEEEeccCcccc
Q 011979          324 KGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAVSYSCIEE  401 (473)
Q Consensus       324 ~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~--~e~~p~kv~Eama~G~PvI~~~~~~~~e  401 (473)
                      +|+..+.+++.+...++++|.++|. ++.+++..+|+.||++++|.....  +.++|++++|||+||+|||+++.++..+
T Consensus       258 ~~~~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~  336 (394)
T cd03794         258 DGPEKEELKELAKALGLDNVTFLGR-VPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAE  336 (394)
T ss_pred             CcccHHHHHHHHHHcCCCcEEEeCC-CChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchh
Confidence            9998888888888887889999996 999999999999999999654432  5667999999999999999999999999


Q ss_pred             ceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcc-ccchHHHHHH
Q 011979          402 LVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGL-SARWATEWEE  458 (473)
Q Consensus       402 ~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~w~~~~~~  458 (473)
                      .+.++.+|++++  |+++++++|.+++++    ++.++++++++++... .++|+...++
T Consensus       337 ~~~~~~~g~~~~~~~~~~l~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~  392 (394)
T cd03794         337 LVEEAGAGLVVPPGDPEALAAAILELLDD----PEERAEMGENGRRYVEEKFSREKLAER  392 (394)
T ss_pred             hhccCCcceEeCCCCHHHHHHHHHHHHhC----hHHHHHHHHHHHHHHHHhhcHHHHHHh
Confidence            999989999986  799999999999974    8999999999998874 7888776554

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=100.00  E-value=1.9e-32  Score=305.66  Aligned_cols=380  Identities=16%  Similarity=0.117  Sum_probs=257.8

Q ss_pred             HHHHHHHhhCC--CcEEEEecCCCCCC-------c--------------ccccCCCEEEEEeecCCCCC-CCCcchhHHH
Q 011979           23 YQALSLARQMS--LEVDVVAYGGSKPH-------A--------------AILEHPSIHIHTMTQWPTIP-RGLPKVLKPV   78 (473)
Q Consensus        23 ~~a~~L~~~~g--~eV~vi~~~~~~~~-------~--------------~~~~~~~i~i~~~~~~~~~~-~~~~~~~~~~   78 (473)
                      .+|..|++. |  |+|+|+|.....+.       +              .....+|+.+++++  ..+. ..+++- ..+
T Consensus       203 ELAraLa~~-~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~~~~~~~~~~~g~rIvRip--~GP~~~~l~Ke-~L~  278 (1050)
T TIGR02468       203 ELARALGSM-PGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSENDGDEMGESSGAYIIRIP--FGPRDKYIPKE-ELW  278 (1050)
T ss_pred             HHHHHHHhC-CCCCEEEEEeCCcCccccccccCCccccccccccccccccccCCCCeEEEEec--cCCCCCCcCHH-HHH
Confidence            456777775 7  89999996643221       0              11234599999999  3433 223331 111


Q ss_pred             HHHHHHHHHHHHHHHH----Hhh-----hhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhh--hcC
Q 011979           79 LLLLKPLIQFFMLLWF----LCV-----KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSL--SLG  147 (473)
Q Consensus        79 ~~~~~~~~~~~~~~~~----~~~-----~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~--~~~  147 (473)
                      .++-.+...+...+..    +..     ....||+||.|.   +.+..++..++...++|+|+|.|.++-.....  ..+
T Consensus       279 ~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHy---w~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g  355 (1050)
T TIGR02468       279 PYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHY---ADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQG  355 (1050)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECc---chHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccc
Confidence            1121111111111100    000     112499999998   66777888999999999999999875222110  001


Q ss_pred             C--Cc----hHH-HHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhC----------------------C---ceEEeeCC
Q 011979          148 R--RS----HFV-SIYRWIEKYYGKMANGCLCVTQAMQHELAQNWG----------------------I---KATVLYDQ  195 (473)
Q Consensus       148 ~--~~----~~~-~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g----------------------~---~~~vi~n~  195 (473)
                      .  ..    .+. ......|+.....||.|||+|...++.+...|+                      .   ++.|||+|
T Consensus       356 ~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpG  435 (1050)
T TIGR02468       356 RMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPG  435 (1050)
T ss_pred             cccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCC
Confidence            0  00    010 111235888999999999999999988766653                      1   57999999


Q ss_pred             -CCCCcccCChhH-HHHHHH-hhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCC
Q 011979          196 -PPEFFHPTSLEE-KHELFC-RLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDED  272 (473)
Q Consensus       196 -~~~~f~~~~~~~-~~~l~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~  272 (473)
                       +.+.|.|.+.+. +..+.. .....      .+.-       .......|        ...+++| +|+++||+.+.||
T Consensus       436 VD~~~F~P~~~~~~~~~~~~~~~~~~------~~~~-------~~~~l~r~--------~~~pdkp-vIL~VGRL~p~KG  493 (1050)
T TIGR02468       436 MEFSHIVPHDGDMDGETEGNEEHPAK------PDPP-------IWSEIMRF--------FTNPRKP-MILALARPDPKKN  493 (1050)
T ss_pred             CcHHHccCCCccccchhccccccccc------ccch-------hhHHHHhh--------cccCCCc-EEEEEcCCccccC
Confidence             447787753211 100000 00000      0000       00000000        1234555 8999999999999


Q ss_pred             HHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh-----------HHHHHHHHHcCC-
Q 011979          273 FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-----------ESYEEKIRRLRL-  340 (473)
Q Consensus       273 ~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-----------~~l~~~~~~~~l-  340 (473)
                      ++.||+|+..+.+.                         ...+++. +|+|.|++.           ..++++++++++ 
T Consensus       494 i~~LIeAf~~L~~l-------------------------~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~  547 (1050)
T TIGR02468       494 ITTLVKAFGECRPL-------------------------RELANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLY  547 (1050)
T ss_pred             HHHHHHHHHHhHhh-------------------------ccCCCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCCC
Confidence            99999999998641                         0135666 467876542           456788999999 


Q ss_pred             CcEEEecCCCCcccHHHHHhcC----cEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC--C
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSA----DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--S  414 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~a----di~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~--~  414 (473)
                      ++|.|.|+ +++++++.+|+.|    |++|+   ||..|+||++++||||||+|||+|+.+|+.|++.++.+|++++  |
T Consensus       548 g~V~FlG~-v~~edvp~lYr~Ad~s~DVFV~---PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D  623 (1050)
T TIGR02468       548 GQVAYPKH-HKQSDVPDIYRLAAKTKGVFIN---PAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHD  623 (1050)
T ss_pred             CeEEecCC-CCHHHHHHHHHHhhhcCCeeeC---CcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCC
Confidence            89999998 9999999999988    69999   7999999999999999999999999999999999999999996  7


Q ss_pred             HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Q 011979          415 SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLIT  465 (473)
Q Consensus       415 ~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~  465 (473)
                      +++|+++|.+++++    ++.+++|++++++.+..|+|+...+++++.+.+
T Consensus       624 ~eaLA~AL~~LL~D----pelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~  670 (1050)
T TIGR02468       624 QQAIADALLKLVAD----KQLWAECRQNGLKNIHLFSWPEHCKTYLSRIAS  670 (1050)
T ss_pred             HHHHHHHHHHHhhC----HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence            99999999999985    899999999999988889999888887755543

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family

Probab=100.00  E-value=2.1e-32  Score=281.52  Aligned_cols=346  Identities=19%  Similarity=0.289  Sum_probs=244.1

Q ss_pred             CCChh-HHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 011979           16 GRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWF   94 (473)
Q Consensus        16 g~s~r-~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (473)
                      |+.++ +..++..|.++  ++|+|++.....     ....++++++++.+..    .......+...   .     ..+.
T Consensus        16 GG~~~~v~~l~~~l~~~--~~v~v~~~~~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~~---~-----~~~~   76 (388)
T TIGR02149        16 GGAGVHVEELTRELARL--MDVDVRCFGDQR-----FDSEGLTVKGYRPWSE----LKEANKALGTF---S-----VDLA   76 (388)
T ss_pred             ccHhHHHHHHHHHHHHh--cCeeEEcCCCch-----hcCCCeEEEEecChhh----ccchhhhhhhh---h-----HHHH
Confidence            44433 33445566553  788888865322     2355788887763211    11111111110   0     0011


Q ss_pred             HhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcC
Q 011979           95 LCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT  174 (473)
Q Consensus        95 ~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS  174 (473)
                      ...+..++|+||+|++.   ...++.+++++.++|+|+++|+...... ...........+..++++...+.+|.++++|
T Consensus        77 ~~~~~~~~divh~~~~~---~~~~~~~~~~~~~~p~v~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S  152 (388)
T TIGR02149        77 MANDPVDADVVHSHTWY---TFLAGHLAKKLYDKPLVVTAHSLEPLRP-WKEEQLGGGYKLSSWAEKTAIEAADRVIAVS  152 (388)
T ss_pred             HhhCCCCCCeEeecchh---hhhHHHHHHHhcCCCEEEEeeccccccc-ccccccccchhHHHHHHHHHHhhCCEEEEcc
Confidence            22233579999999842   2334667777789999999998731100 0000000112345678889999999999999


Q ss_pred             HHHHHHHHHHh-CC---ceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccccc
Q 011979          175 QAMQHELAQNW-GI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGI  249 (473)
Q Consensus       175 ~~~~~~l~~~~-g~---~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (473)
                      +.+++.+.+.+ +.   ++.+++|+.+ +.|.+..   ...++.+++                                 
T Consensus       153 ~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~~---~~~~~~~~~---------------------------------  196 (388)
T TIGR02149       153 GGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDD---GNVVLDRYG---------------------------------  196 (388)
T ss_pred             HHHHHHHHHHcCCCCcceEEEecCCCChhhcCCCc---hHHHHHHhC---------------------------------
Confidence            99999998766 43   3789999954 5555432   233444443                                 


Q ss_pred             ccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh-
Q 011979          250 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-  328 (473)
Q Consensus       250 ~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-  328 (473)
                         ++++++ +++|+|++.+.||++.|++|++.+.                              ++++++++|+|+.. 
T Consensus       197 ---~~~~~~-~i~~~Grl~~~Kg~~~li~a~~~l~------------------------------~~~~l~i~g~g~~~~  242 (388)
T TIGR02149       197 ---IDRSRP-YILFVGRITRQKGVPHLLDAVHYIP------------------------------KDVQVVLCAGAPDTP  242 (388)
T ss_pred             ---CCCCce-EEEEEcccccccCHHHHHHHHHHHh------------------------------hcCcEEEEeCCCCcH
Confidence               233344 8999999999999999999999873                              35789999887654 


Q ss_pred             ---HHHHHHHHHcCC--CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccce
Q 011979          329 ---ESYEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELV  403 (473)
Q Consensus       329 ---~~l~~~~~~~~l--~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i  403 (473)
                         +.+++.+++++.  ++|.+.+++++.+++..+|+.||++|+   ||..|++|++++|||+||+|||+++.++..|++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~---ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i  319 (388)
T TIGR02149       243 EVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVC---PSIYEPLGIVNLEAMACGTPVVASATGGIPEVV  319 (388)
T ss_pred             HHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEe---CCccCCCChHHHHHHHcCCCEEEeCCCCHHHHh
Confidence               345555666655  358887766999999999999999999   688899999999999999999999999999999


Q ss_pred             ecCCceEEeC--CH------HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHHH
Q 011979          404 KVDKNGLLFS--SS------SELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAK  461 (473)
Q Consensus       404 ~~~~~G~~~~--~~------~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~  461 (473)
                      .++.+|++++  |.      ++++++|.+++++    ++.+++|++++++.. ++|+|+...+++.+
T Consensus       320 ~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~----~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~  382 (388)
T TIGR02149       320 VDGETGFLVPPDNSDADGFQAELAKAINILLAD----PELAKKMGIAGRKRAEEEFSWGSIAKKTVE  382 (388)
T ss_pred             hCCCceEEcCCCCCcccchHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            9999999986  56      8999999999885    899999999998866 67999888877553

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.6e-32  Score=273.09  Aligned_cols=351  Identities=20%  Similarity=0.267  Sum_probs=248.2

Q ss_pred             CChhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHh
Q 011979           17 RSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLC   96 (473)
Q Consensus        17 ~s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (473)
                      .+.++...+..|.++ ||+|++++......... ....++......     .....+...... .       ...+... 
T Consensus        16 ~~~~~~~l~~~L~~~-g~~v~v~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~-~-------~~~~~~~-   79 (374)
T cd03817          16 VATSIRRLAEELEKR-GHEVYVVAPSYPGAPEE-EEVVVVRPFRVP-----TFKYPDFRLPLP-I-------PRALIII-   79 (374)
T ss_pred             eehHHHHHHHHHHHc-CCeEEEEeCCCCCCCcc-cccccccccccc-----cchhhhhhcccc-H-------HHHHHHH-
Confidence            356667778888887 99999999765432211 111111111111     000000000000 0       0011111 


Q ss_pred             hhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHH-HHHHHHhhcCCEEEEcCH
Q 011979           97 VKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYR-WIEKYYGKMANGCLCVTQ  175 (473)
Q Consensus        97 ~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~-~~e~~~~~~ad~vi~vS~  175 (473)
                      .+..+||+||++.+...  ...+...++..++|++++.|+..................... ++++.+.+.+|.++++|+
T Consensus        80 ~~~~~~Div~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~  157 (374)
T cd03817          80 LKELGPDIVHTHTPFSL--GLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSE  157 (374)
T ss_pred             HhhcCCCEEEECCchhh--hhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccH
Confidence            23378999999987333  334566677788999999999853222111111222222333 678888889999999999


Q ss_pred             HHHHHHHHHhCCc--eEEeeCCC-CCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccc
Q 011979          176 AMQHELAQNWGIK--ATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF  252 (473)
Q Consensus       176 ~~~~~l~~~~g~~--~~vi~n~~-~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (473)
                      .+++.+.+. +.+  +.+++++. ...|.+...+   ..+..++                                    
T Consensus       158 ~~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~------------------------------------  197 (374)
T cd03817         158 KIADLLREY-GVKRPIEVIPTGIDLDRFEPVDGD---DERRKLG------------------------------------  197 (374)
T ss_pred             HHHHHHHhc-CCCCceEEcCCccchhccCccchh---HHHHhcC------------------------------------
Confidence            999888764 443  68888884 3455443221   1122211                                    


Q ss_pred             cCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHH
Q 011979          253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE  332 (473)
Q Consensus       253 ~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~  332 (473)
                      .. +++..++|+|++.+.||++.+++++..+.++                           .++++|+++|+|+..+.++
T Consensus       198 ~~-~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~  249 (374)
T cd03817         198 IP-EDEPVLLYVGRLAKEKNIDFLIRAFARLLKE---------------------------EPDVKLVIVGDGPEREELE  249 (374)
T ss_pred             CC-CCCeEEEEEeeeecccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCchHHHHH
Confidence            11 2344899999999999999999999998772                           5789999999999989999


Q ss_pred             HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEE
Q 011979          333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL  411 (473)
Q Consensus       333 ~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~  411 (473)
                      +.++++++ ++|.++|. ++.+++..+|+.||++++   ++..+++|++++|||+||+|||+++.++..+++.++.+|++
T Consensus       250 ~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~l~---~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~  325 (374)
T cd03817         250 ELARELGLADRVIFTGF-VPREELPDYYKAADLFVF---ASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFL  325 (374)
T ss_pred             HHHHHcCCCCcEEEecc-CChHHHHHHHHHcCEEEe---cccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEE
Confidence            99999988 79999998 999999999999999999   67778899999999999999999999999999999999999


Q ss_pred             eCC-HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHH
Q 011979          412 FSS-SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAK  461 (473)
Q Consensus       412 ~~~-~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~  461 (473)
                      +++ .++++++|.+++++    ++.+++|++++++..+++.|...+++.++
T Consensus       326 ~~~~~~~~~~~i~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (374)
T cd03817         326 FPPGDEALAEALLRLLQD----PELRRRLSKNAEESAEKFSFAKKVEKLYE  372 (374)
T ss_pred             eCCCCHHHHHHHHHHHhC----hHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            974 33999999999985    88889999999998866666666665544

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=100.00  E-value=1.1e-32  Score=280.61  Aligned_cols=275  Identities=21%  Similarity=0.225  Sum_probs=216.6

Q ss_pred             hhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHH
Q 011979           98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM  177 (473)
Q Consensus        98 ~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~  177 (473)
                      +..+||+||+|..+.  +. .+..+++..++|+|+++|+....... ....... .+.+...++.+.+.+|.++++|+.+
T Consensus        79 ~~~~~dvvh~~~~~~--~~-~~~~~~~~~~~p~i~~~h~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~  153 (367)
T cd05844          79 RRHRPDLVHAHFGFD--GV-YALPLARRLGVPLVVTFHGFDATTSL-ALLLRSR-WALYARRRRRLARRAALFIAVSQFI  153 (367)
T ss_pred             HhhCCCEEEeccCch--HH-HHHHHHHHcCCCEEEEEeCccccccc-hhhcccc-hhHHHHHHHHHHHhcCEEEECCHHH
Confidence            347899999987432  22 34455667789999999975321110 0000011 3344566778888999999999999


Q ss_pred             HHHHHHHhCCc---eEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccccccccc
Q 011979          178 QHELAQNWGIK---ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL  253 (473)
Q Consensus       178 ~~~l~~~~g~~---~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (473)
                      ++.+.+. |.+   +.+++|+.+ +.|.+..                                                 
T Consensus       154 ~~~~~~~-~~~~~~i~vi~~g~d~~~~~~~~-------------------------------------------------  183 (367)
T cd05844         154 RDRLLAL-GFPPEKVHVHPIGVDTAKFTPAT-------------------------------------------------  183 (367)
T ss_pred             HHHHHHc-CCCHHHeEEecCCCCHHhcCCCC-------------------------------------------------
Confidence            9998874 543   788888844 3333211                                                 


Q ss_pred             CCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHH
Q 011979          254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE  333 (473)
Q Consensus       254 ~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~  333 (473)
                      ....+..++|+|++.+.||++.+++|+..+.++                           .++++|+|+|+|+..+++++
T Consensus       184 ~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~l~ivG~g~~~~~~~~  236 (367)
T cd05844         184 PARRPPRILFVGRFVEKKGPLLLLEAFARLARR---------------------------VPEVRLVIIGDGPLLAALEA  236 (367)
T ss_pred             CCCCCcEEEEEEeeccccChHHHHHHHHHHHHh---------------------------CCCeEEEEEeCchHHHHHHH
Confidence            111233899999999999999999999999873                           68999999999998888999


Q ss_pred             HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCC---CCCCCcHHHHHHHhcCCcEEEeccCccccceecCCce
Q 011979          334 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS---SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG  409 (473)
Q Consensus       334 ~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s---~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G  409 (473)
                      .++++++ ++|.|+|. ++.+++..+|+.||++++|...+   ..|++|++++|||+||+|||+++.++..|++.++.+|
T Consensus       237 ~~~~~~~~~~v~~~g~-~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g  315 (367)
T cd05844         237 LARALGLGGRVTFLGA-QPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETG  315 (367)
T ss_pred             HHHHcCCCCeEEECCC-CCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCee
Confidence            9999888 79999998 99999999999999999963322   2589999999999999999999999999999999999


Q ss_pred             EEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHH
Q 011979          410 LLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEH  459 (473)
Q Consensus       410 ~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~  459 (473)
                      ++++  |+++++++|.+++++    ++.+.+|++++++.. +.++|+...++.
T Consensus       316 ~~~~~~d~~~l~~~i~~l~~~----~~~~~~~~~~a~~~~~~~~s~~~~~~~l  364 (367)
T cd05844         316 LLVPEGDVAALAAALGRLLAD----PDLRARMGAAGRRRVEERFDLRRQTAKL  364 (367)
T ss_pred             EEECCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence            9996  799999999999985    888999999998876 678887766553

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.9e-32  Score=275.71  Aligned_cols=330  Identities=19%  Similarity=0.188  Sum_probs=238.1

Q ss_pred             CCCChhHHH-HHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 011979           15 LGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW   93 (473)
Q Consensus        15 ~g~s~r~~~-~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (473)
                      .||.+++.. .+..|.++ ||+|.+++..+..  .......+++++.++.  ....    ....+.....        +.
T Consensus         9 ~gG~e~~~~~l~~~L~~~-g~~v~v~~~~~~~--~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~--------l~   71 (355)
T cd03819           9 SGGVERGTLELARALVER-GHRSLVASAGGRL--VAELEAEGSRHIKLPF--ISKN----PLRILLNVAR--------LR   71 (355)
T ss_pred             cCcHHHHHHHHHHHHHHc-CCEEEEEcCCCch--HHHHHhcCCeEEEccc--cccc----hhhhHHHHHH--------HH
Confidence            466666654 56777776 9999999865322  2334455787777662  1111    1111111111        11


Q ss_pred             HHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEc
Q 011979           94 FLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV  173 (473)
Q Consensus        94 ~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v  173 (473)
                      ..+ +..+||+||++++..  .. .+.++++..++|+++++|+.....        .        ..+...+.+|.++++
T Consensus        72 ~~~-~~~~~dii~~~~~~~--~~-~~~~~~~~~~~~~i~~~h~~~~~~--------~--------~~~~~~~~~~~vi~~  131 (355)
T cd03819          72 RLI-REEKVDIVHARSRAP--AW-SAYLAARRTRPPFVTTVHGFYSVN--------F--------RYNAIMARGDRVIAV  131 (355)
T ss_pred             HHH-HHcCCCEEEECCCch--hH-HHHHHHHhcCCCEEEEeCCchhhH--------H--------HHHHHHHhcCEEEEe
Confidence            122 237899999998532  22 345556667899999999983210        0        223344679999999


Q ss_pred             CHHHHHHHHHHhCCc---eEEeeCCCC-CCcccCCh--hHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccc
Q 011979          174 TQAMQHELAQNWGIK---ATVLYDQPP-EFFHPTSL--EEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLA  247 (473)
Q Consensus       174 S~~~~~~l~~~~g~~---~~vi~n~~~-~~f~~~~~--~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (473)
                      |+.+++.+.+.++.+   +.+++|+.+ +.|.+...  .....++.+++                               
T Consensus       132 s~~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~-------------------------------  180 (355)
T cd03819         132 SNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWP-------------------------------  180 (355)
T ss_pred             CHHHHHHHHHhcCCChhhEEEecCCccccccCccccchHHHHHHHHHcC-------------------------------
Confidence            999999998777764   789999844 55544321  11111233222                               


Q ss_pred             ccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC
Q 011979          248 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD  327 (473)
Q Consensus       248 ~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~  327 (473)
                           .++ ...+++|+|++.+.||++.+++++..+.+                           ..++++++|+|.|+.
T Consensus       181 -----~~~-~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~---------------------------~~~~~~l~ivG~~~~  227 (355)
T cd03819         181 -----LPK-GKPVILLPGRLTRWKGQEVFIEALARLKK---------------------------DDPDVHLLIVGDAQG  227 (355)
T ss_pred             -----CCC-CceEEEEeeccccccCHHHHHHHHHHHHh---------------------------cCCCeEEEEEECCcc
Confidence                 122 23489999999999999999999999877                           257899999999875


Q ss_pred             hHH----HHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCC-CCCCCcHHHHHHHhcCCcEEEeccCcccc
Q 011979          328 KES----YEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVCAVSYSCIEE  401 (473)
Q Consensus       328 ~~~----l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s-~~e~~p~kv~Eama~G~PvI~~~~~~~~e  401 (473)
                      .+.    +.+.++++++ ++|.|+|+   .+++..+|+.||++++   +| ..|++|++++||||||+|||+++.++..|
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~l~~ad~~i~---ps~~~e~~~~~l~EA~a~G~PvI~~~~~~~~e  301 (355)
T cd03819         228 RRFYYAELLELIKRLGLQDRVTFVGH---CSDMPAAYALADIVVS---ASTEPEAFGRTAVEAQAMGRPVIASDHGGARE  301 (355)
T ss_pred             cchHHHHHHHHHHHcCCcceEEEcCC---cccHHHHHHhCCEEEe---cCCCCCCCchHHHHHHhcCCCEEEcCCCCcHH
Confidence            433    3456778887 78999998   8899999999999999   56 78999999999999999999999999999


Q ss_pred             ceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHH
Q 011979          402 LVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWAT  454 (473)
Q Consensus       402 ~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~  454 (473)
                      ++.++.+|++++  |+++++++|..++..   +++.+.++++++++.. +.|+|++
T Consensus       302 ~i~~~~~g~~~~~~~~~~l~~~i~~~~~~---~~~~~~~~~~~a~~~~~~~f~~~~  354 (355)
T cd03819         302 TVRPGETGLLVPPGDAEALAQALDQILSL---LPEGRAKMFAKARMCVETLFSYDR  354 (355)
T ss_pred             HHhCCCceEEeCCCCHHHHHHHHHHHHhh---CHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999999985  799999999776664   6899999999999988 6677753

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.

>PRK00654 glgA glycogen synthase; Provisional

Probab=100.00  E-value=8.1e-32  Score=286.15  Aligned_cols=369  Identities=15%  Similarity=0.119  Sum_probs=245.8

Q ss_pred             CCCChhHH-HHHHHHHhhCCCcEEEEecCCCCCCcc------------------cccCCCEEEEEeecCCC-CCCCCcc-
Q 011979           15 LGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAA------------------ILEHPSIHIHTMTQWPT-IPRGLPK-   73 (473)
Q Consensus        15 ~g~s~r~~-~~a~~L~~~~g~eV~vi~~~~~~~~~~------------------~~~~~~i~i~~~~~~~~-~~~~~~~-   73 (473)
                      .|+.+.+. .++..|+++ ||+|+|+++........                  ....+|++++.+..... ....+.. 
T Consensus        16 ~GGl~~~v~~L~~~L~~~-G~~V~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~v~~~~~~~~~~~y~~   94 (466)
T PRK00654         16 TGGLGDVVGALPKALAAL-GHDVRVLLPGYPAIREKLRDAQVVGRLDLFTVLFGHLEGDGVPVYLIDAPHLFDRPSGYGY   94 (466)
T ss_pred             cCcHHHHHHHHHHHHHHC-CCcEEEEecCCcchhhhhcCceEEEEeeeEEEEEEeEEcCCceEEEEeCHHHcCCCCCCCC
Confidence            45544443 456777776 99999999764332111                  01236888888873111 1111110 


Q ss_pred             ---hhHHHHHHHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhh-----CCCeEEEEecCchhhhh-h-
Q 011979           74 ---VLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL-----RRSAFIVDWHNFGYTLL-S-  143 (473)
Q Consensus        74 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~-----~~~~~i~~~h~~~~~~~-~-  143 (473)
                         ..++. .+.+.   ...++..+   ..+||+||+|.   +.+..++.+++..     .++|+|+++|+..+.-. . 
T Consensus        95 ~d~~~r~~-~f~~~---~~~~~~~~---~~~pDiiH~h~---w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~  164 (466)
T PRK00654         95 PDNGERFA-FFSWA---AAEFAEGL---DPRPDIVHAHD---WHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPA  164 (466)
T ss_pred             cChHHHHH-HHHHH---HHHHHHhc---CCCCceEEECC---cHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCH
Confidence               11111 01111   11111111   24899999999   4455455555533     37999999999853110 0 


Q ss_pred             --h-hcCCC-ch--HHH--HH--HHHHHHHhhcCCEEEEcCHHHHHHHHHH-h-----------CCceEEeeCC-CCCCc
Q 011979          144 --L-SLGRR-SH--FVS--IY--RWIEKYYGKMANGCLCVTQAMQHELAQN-W-----------GIKATVLYDQ-PPEFF  200 (473)
Q Consensus       144 --~-~~~~~-~~--~~~--~~--~~~e~~~~~~ad~vi~vS~~~~~~l~~~-~-----------g~~~~vi~n~-~~~~f  200 (473)
                        . ..+-. ..  ...  .+  ..+.+...+.||.++++|+.+++++.+. +           ..++.+|+|| +.+.|
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~  244 (466)
T PRK00654        165 EILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIW  244 (466)
T ss_pred             HHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCcccc
Confidence              0 00000 00  000  00  1234455678999999999999888642 2           2248899999 44667


Q ss_pred             ccCCh----------------hHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCC-CCCeEEEE
Q 011979          201 HPTSL----------------EEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP-NRPALVVS  263 (473)
Q Consensus       201 ~~~~~----------------~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~  263 (473)
                      .|...                +.+..++.+++                                    +++ +.| ++++
T Consensus       245 ~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~g------------------------------------l~~~~~~-~i~~  287 (466)
T PRK00654        245 NPETDPLLAANYSADDLEGKAENKRALQERFG------------------------------------LPDDDAP-LFAM  287 (466)
T ss_pred             CCccCcccccccChhhhhchHHHHHHHHHHhC------------------------------------CCCCCCc-EEEE
Confidence            66421                12334455544                                    222 344 8999


Q ss_pred             EeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC--hHHHHHHHHHcCCC
Q 011979          264 STSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLK  341 (473)
Q Consensus       264 ~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~--~~~l~~~~~~~~l~  341 (473)
                      +||+.++||++.+++|+..+.+                             .+++|+|+|+|+.  .+.+++++++++ .
T Consensus       288 vGRl~~~KG~~~li~a~~~l~~-----------------------------~~~~lvivG~g~~~~~~~l~~l~~~~~-~  337 (466)
T PRK00654        288 VSRLTEQKGLDLVLEALPELLE-----------------------------QGGQLVLLGTGDPELEEAFRALAARYP-G  337 (466)
T ss_pred             eeccccccChHHHHHHHHHHHh-----------------------------cCCEEEEEecCcHHHHHHHHHHHHHCC-C
Confidence            9999999999999999999865                             3789999999863  467888888887 4


Q ss_pred             cEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecC------CceEEeC--
Q 011979          342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD------KNGLLFS--  413 (473)
Q Consensus       342 ~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~------~~G~~~~--  413 (473)
                      ++.+.++ .+.+.++.+|+.||++|+   ||..|+||++++|||+||+|+|+++.+|+.|+|.++      .+|++++  
T Consensus       338 ~v~~~~g-~~~~~~~~~~~~aDv~v~---PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~  413 (466)
T PRK00654        338 KVGVQIG-YDEALAHRIYAGADMFLM---PSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDF  413 (466)
T ss_pred             cEEEEEe-CCHHHHHHHHhhCCEEEe---CCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCC
Confidence            5666545 355667899999999999   788999999999999999999999999999999888      8999996  


Q ss_pred             CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhh
Q 011979          414 SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVIS  469 (473)
Q Consensus       414 ~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~  469 (473)
                      |+++++++|.++++... +++.+++|++++.+  +.|+|+...+++ .++++++.+
T Consensus       414 d~~~la~~i~~~l~~~~-~~~~~~~~~~~~~~--~~fsw~~~a~~~-~~lY~~~~~  465 (466)
T PRK00654        414 NAEDLLRALRRALELYR-QPPLWRALQRQAMA--QDFSWDKSAEEY-LELYRRLLG  465 (466)
T ss_pred             CHHHHHHHHHHHHHHhc-CHHHHHHHHHHHhc--cCCChHHHHHHH-HHHHHHHhh
Confidence            79999999999886432 46668889888864  479999988885 456666543

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=8.1e-32  Score=282.45  Aligned_cols=353  Identities=14%  Similarity=0.133  Sum_probs=241.9

Q ss_pred             CCChhHHHHHHHHHhhC--CCcEEEEecCCCCCC----------cccccCCCEEEEEee-c-CCCCCCCCcchhHHHHHH
Q 011979           16 GRSPRMQYQALSLARQM--SLEVDVVAYGGSKPH----------AAILEHPSIHIHTMT-Q-WPTIPRGLPKVLKPVLLL   81 (473)
Q Consensus        16 g~s~r~~~~a~~L~~~~--g~eV~vi~~~~~~~~----------~~~~~~~~i~i~~~~-~-~~~~~~~~~~~~~~~~~~   81 (473)
                      ||++|+...|..-..+.  +++|+|+|......+          -++...+++.++++. . ...+....+++.......
T Consensus        14 gg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~   93 (419)
T cd03806          14 GGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEASTYPRFTLLGQAL   93 (419)
T ss_pred             CCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeeccccCCceeeHHHHH
Confidence            38999998875443333  789999996644322          122335567765552 1 112233334433333333


Q ss_pred             HHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCch---hhhhhhhcC-----------
Q 011979           82 LKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFG---YTLLSLSLG-----------  147 (473)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~---~~~~~~~~~-----------  147 (473)
                      ..++..     +..+.+ .+||+++.+.++..... +.   ..+.+.|+|..+|-..   ........+           
T Consensus        94 ~~~~~~-----~~~~~~-~~pDv~i~~~g~~~~~~-~~---~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~  163 (419)
T cd03806          94 GSMILG-----LEALLK-LVPDIFIDTMGYPFTYP-LV---RLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIA  163 (419)
T ss_pred             HHHHHH-----HHHHHh-cCCCEEEEcCCcccHHH-HH---HHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchh
Confidence            333221     111212 47999988874433222 22   2234789999999221   111111111           


Q ss_pred             CCc---hHH----HHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC--ceEEeeCCCC-CCcccCChhHHHHHHHhhhh
Q 011979          148 RRS---HFV----SIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQPP-EFFHPTSLEEKHELFCRLNK  217 (473)
Q Consensus       148 ~~~---~~~----~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g~--~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~  217 (473)
                      .++   ..+    +.+.+++++..+.||.++++|+.+++.+.+.++.  ++.++|++.+ +.|.+...            
T Consensus       164 ~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~------------  231 (419)
T cd03806         164 RSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPL------------  231 (419)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhccccc------------
Confidence            111   112    2334678888999999999999999999887766  5889998743 33322210            


Q ss_pred             hccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCc
Q 011979          218 ILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST  297 (473)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~  297 (473)
                                                         ....++..++|+|++.+.||++.+++|+..+.+..          
T Consensus       232 -----------------------------------~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~----------  266 (419)
T cd03806         232 -----------------------------------DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRL----------  266 (419)
T ss_pred             -----------------------------------ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhC----------
Confidence                                               00112238999999999999999999999987630          


Q ss_pred             hhhHHHhhhccCccccCCCEEEEEEcCCCC------hHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEecc
Q 011979          298 NEEVFLKEISDGKQYLYPRLLFIITGKGPD------KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHT  370 (473)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~------~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~  370 (473)
                               .+.   ..++++|+|+|+|+.      .++++++++++++ ++|.|+|. +|.+++..+|+.||++++   
T Consensus       267 ---------~~~---~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~-v~~~~l~~~l~~adv~v~---  330 (419)
T cd03806         267 ---------PEE---IKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVN-APFEELLEELSTASIGLH---  330 (419)
T ss_pred             ---------ccc---ccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecC-CCHHHHHHHHHhCeEEEE---
Confidence                     000   014699999998742      3667888999999 79999998 999999999999999999   


Q ss_pred             CCCCCCCcHHHHHHHhcCCcEEEeccCc-ccccee---cCCceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 011979          371 SSSGLDLPMKVVDMFGCGLPVCAVSYSC-IEELVK---VDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM  446 (473)
Q Consensus       371 ~s~~e~~p~kv~Eama~G~PvI~~~~~~-~~e~i~---~~~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~  446 (473)
                      ++..|+||++++||||||+|||+++.+| ..+++.   ++.+|++++|+++++++|.+++++   +++.++.+++++++.
T Consensus       331 ~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~d~~~la~ai~~ll~~---~~~~~~~~~~~~~~~  407 (419)
T cd03806         331 TMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLASTAEEYAEAIEKILSL---SEEERLRIRRAARSS  407 (419)
T ss_pred             CCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHH
Confidence            6778999999999999999999999866 457777   799999999999999999999996   456677777777776


Q ss_pred             ccccchHH
Q 011979          447 GLSARWAT  454 (473)
Q Consensus       447 ~~~~~w~~  454 (473)
                      .++|+|+.
T Consensus       408 ~~~fs~~~  415 (419)
T cd03806         408 VKRFSDEE  415 (419)
T ss_pred             HHhhCHHH
Confidence            67888875

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.5e-31  Score=271.08  Aligned_cols=342  Identities=14%  Similarity=0.140  Sum_probs=241.2

Q ss_pred             CCCCChhHH-HHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHH
Q 011979           14 DLGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLL   92 (473)
Q Consensus        14 ~~g~s~r~~-~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (473)
                      ..||.++.. ..+..|.++ ||+|+|+|....... ......|+++++++...  .....   .....+..        +
T Consensus        13 ~~gG~~~~~~~la~~L~~~-g~~v~v~~~~~~~~~-~~~~~~~i~~~~~~~~~--~~~~~---~~~~~~~~--------~   77 (363)
T cd04955          13 KYGGFETFVEELAPRLVAR-GHEVTVYCRSPYPKQ-KETEYNGVRLIHIPAPE--IGGLG---TIIYDILA--------I   77 (363)
T ss_pred             ccCcHHHHHHHHHHHHHhc-CCCEEEEEccCCCCC-cccccCCceEEEcCCCC--ccchh---hhHHHHHH--------H
Confidence            346655544 345677776 999999997644322 13345689988887211  11111   11111111        1


Q ss_pred             HHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEE
Q 011979           93 WFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLC  172 (473)
Q Consensus        93 ~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~  172 (473)
                      +....+..++|++|...|..   .....+ .+..+.|++++.|+..+..    ........+++++.++...+.+|.+++
T Consensus        78 ~~~~~~~~~~~~i~~~~~~~---~~~~~~-~~~~~~~~v~~~h~~~~~~----~~~~~~~~~~~~~~~~~~~~~ad~ii~  149 (363)
T cd04955          78 LHALFVKRDIDHVHALGPAI---APFLPL-LRLKGKKVVVNMDGLEWKR----AKWGRPAKRYLKFGEKLAVKFADRLIA  149 (363)
T ss_pred             HHHHhccCCeEEEEecCccH---HHHHHH-HHhcCCCEEEEccCcceee----cccccchhHHHHHHHHHHHhhccEEEe
Confidence            11121235677777666433   212223 3344789999999874311    111223345667788888899999999


Q ss_pred             cCHHHHHHHHHHhCCceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccccccc
Q 011979          173 VTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV  251 (473)
Q Consensus       173 vS~~~~~~l~~~~g~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (473)
                      +|+.+++.+.+.+|.+..+++|+.+ ..+.+     +.+.+..++                                   
T Consensus       150 ~s~~~~~~~~~~~~~~~~~i~ngv~~~~~~~-----~~~~~~~~~-----------------------------------  189 (363)
T cd04955         150 DSPGIKEYLKEKYGRDSTYIPYGADHVVSSE-----EDEILKKYG-----------------------------------  189 (363)
T ss_pred             CCHHHHHHHHHhcCCCCeeeCCCcChhhcch-----hhhhHHhcC-----------------------------------
Confidence            9999999998888888889999854 32322     111111111                                   


Q ss_pred             ccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHH
Q 011979          252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY  331 (473)
Q Consensus       252 ~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l  331 (473)
                       ..+ ++ .++|+|++.+.||++.+++|++.+.                              ++++|+++|+|+....+
T Consensus       190 -~~~-~~-~i~~~G~~~~~Kg~~~li~a~~~l~------------------------------~~~~l~ivG~~~~~~~~  236 (363)
T cd04955         190 -LEP-GR-YYLLVGRIVPENNIDDLIEAFSKSN------------------------------SGKKLVIVGNADHNTPY  236 (363)
T ss_pred             -CCC-Cc-EEEEEecccccCCHHHHHHHHHhhc------------------------------cCceEEEEcCCCCcchH
Confidence             112 23 6789999999999999999998862                              36899999999776667


Q ss_pred             HHHHH-HcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCC-CCCcHHHHHHHhcCCcEEEeccCccccceecCCc
Q 011979          332 EEKIR-RLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKN  408 (473)
Q Consensus       332 ~~~~~-~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~-e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~  408 (473)
                      .+.++ .++. ++|.|+|. ++.+++..++..||++++   ||.. |++|++++|||+||+|||+|+.++..|++.+  +
T Consensus       237 ~~~~~~~~~~~~~V~~~g~-~~~~~~~~~~~~ad~~v~---ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~  310 (363)
T cd04955         237 GKLLKEKAAADPRIIFVGP-IYDQELLELLRYAALFYL---HGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--K  310 (363)
T ss_pred             HHHHHHHhCCCCcEEEccc-cChHHHHHHHHhCCEEEe---CCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--C
Confidence            76666 5666 79999998 999999999999999999   5655 9999999999999999999999999999865  7


Q ss_pred             eEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHHH
Q 011979          409 GLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAK  461 (473)
Q Consensus       409 G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~  461 (473)
                      |+++++.+.++++|.+++++    ++.+.++++++++.. +.++|+...+++.+
T Consensus       311 g~~~~~~~~l~~~i~~l~~~----~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~  360 (363)
T cd04955         311 AIYFKVGDDLASLLEELEAD----PEEVSAMAKAARERIREKYTWEKIADQYEE  360 (363)
T ss_pred             eeEecCchHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            88887555599999999995    788999999999877 45898887766543

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.4e-31  Score=269.06  Aligned_cols=343  Identities=19%  Similarity=0.246  Sum_probs=242.7

Q ss_pred             CCChhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 011979           16 GRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFL   95 (473)
Q Consensus        16 g~s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (473)
                      |...++...+..|+++ ||+|++++...........  ..+.+.....  ...............+.+.           
T Consensus        15 G~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-----------   78 (364)
T cd03814          15 GVVRTLQRLVEHLRAR-GHEVLVIAPGPFRESEGPA--RVVPVPSVPL--PGYPEIRLALPPRRRVRRL-----------   78 (364)
T ss_pred             ceehHHHHHHHHHHHC-CCEEEEEeCCchhhccCCC--Cceeeccccc--CcccceEecccchhhHHHH-----------
Confidence            3355666777888886 9999999976543221111  2222222220  0011111111111111111           


Q ss_pred             hhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCH
Q 011979           96 CVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ  175 (473)
Q Consensus        96 ~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~  175 (473)
                      + +..+||+||++.+....  ..+..+++..++|+++++|+.+.....  .............+.+.+.+.+|.++++|+
T Consensus        79 ~-~~~~pdii~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~  153 (364)
T cd03814          79 L-DAFAPDVVHIATPGPLG--LAALRAARRLGIPVVTSYHTDFPEYLR--YYGLGPLSWLAWAYLRWFHNRADRVLVPSP  153 (364)
T ss_pred             H-HhcCCCEEEEeccchhh--HHHHHHHHHcCCCEEEEEecChHHHhh--hcccchHhHhhHHHHHHHHHhCCEEEeCCH
Confidence            1 23789999999754332  235566667889999999987432221  112223334445667778889999999999


Q ss_pred             HHHHHHHHHhCCceEEeeCCC-CCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccC
Q 011979          176 AMQHELAQNWGIKATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK  254 (473)
Q Consensus       176 ~~~~~l~~~~g~~~~vi~n~~-~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (473)
                      .+++.+.+....++.+++++. .+.|.+....  ...+.+++                                      
T Consensus       154 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~--------------------------------------  193 (364)
T cd03814         154 SLADELRARGFRRVRLWPRGVDTELFHPRRRD--EALRARLG--------------------------------------  193 (364)
T ss_pred             HHHHHHhccCCCceeecCCCccccccCccccc--HHHHHHhC--------------------------------------
Confidence            999866654334478888884 3555443211  11111111                                      


Q ss_pred             CCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHH
Q 011979          255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK  334 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~  334 (473)
                      ...+..++|+|++.+.||++.++++++.+.+                           . ++++|+++|.|++.+.++  
T Consensus       194 ~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~---------------------------~-~~~~l~i~G~~~~~~~~~--  243 (364)
T cd03814         194 PPDRPVLLYVGRLAPEKNLEALLDADLPLRR---------------------------R-PPVRLVIVGDGPARARLE--  243 (364)
T ss_pred             CCCCeEEEEEeccccccCHHHHHHHHHHhhh---------------------------c-CCceEEEEeCCchHHHHh--
Confidence            1233489999999999999999999999876                           3 789999999998766554  


Q ss_pred             HHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC
Q 011979          335 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS  413 (473)
Q Consensus       335 ~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~  413 (473)
                          +. ++|.+.|+ ++.+++..+|++||++++   ++..|++|++++||||||+|||+++.++..+++.++.+|++++
T Consensus       244 ----~~~~~v~~~g~-~~~~~~~~~~~~~d~~l~---~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~  315 (364)
T cd03814         244 ----ARYPNVHFLGF-LDGEELAAAYASADVFVF---PSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVE  315 (364)
T ss_pred             ----ccCCcEEEEec-cCHHHHHHHHHhCCEEEE---CcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcC
Confidence                23 69999998 999999999999999999   6777899999999999999999999999999999999999986


Q ss_pred             --CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHH
Q 011979          414 --SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAK  461 (473)
Q Consensus       414 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~  461 (473)
                        |.++++++|.+++++    ++.++++++++++..++++|++..++..+
T Consensus       316 ~~~~~~l~~~i~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (364)
T cd03814         316 PGDAEAFAAALAALLAD----PELRRRMAARARAEAERRSWEAFLDNLLE  361 (364)
T ss_pred             CCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence              588899999999985    89999999999998888998888777554

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type

Probab=100.00  E-value=2.1e-31  Score=283.28  Aligned_cols=288  Identities=17%  Similarity=0.147  Sum_probs=213.3

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCC---CeEEEEecCchhhhh-hh----hcCCC-chHH-HH-----HHHHHHHHh
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRR---SAFIVDWHNFGYTLL-SL----SLGRR-SHFV-SI-----YRWIEKYYG  164 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~---~~~i~~~h~~~~~~~-~~----~~~~~-~~~~-~~-----~~~~e~~~~  164 (473)
                      .+||+||+|+   +.+..++.+++...+   +|+|+++|++.+.-. ..    ..+.. ..+. ..     ...+.+...
T Consensus       127 ~~~DiiH~hd---w~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  203 (473)
T TIGR02095       127 WQPDVVHAHD---WHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGI  203 (473)
T ss_pred             CCCCEEEECC---cHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHH
Confidence            5899999999   455555555655443   899999999853110 00    00000 0000 00     012345667


Q ss_pred             hcCCEEEEcCHHHHHHHHHH-h-----------CCceEEeeCCC-CCCcccCCh----------------hHHHHHHHhh
Q 011979          165 KMANGCLCVTQAMQHELAQN-W-----------GIKATVLYDQP-PEFFHPTSL----------------EEKHELFCRL  215 (473)
Q Consensus       165 ~~ad~vi~vS~~~~~~l~~~-~-----------g~~~~vi~n~~-~~~f~~~~~----------------~~~~~l~~~l  215 (473)
                      +.||.++++|+.+++.+.+. +           ..++.+|+||. .+.|.|...                +.+..+++++
T Consensus       204 ~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~  283 (473)
T TIGR02095       204 VYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEEL  283 (473)
T ss_pred             HhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHc
Confidence            89999999999999888642 1           23588999994 466765421                1233444444


Q ss_pred             hhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCC
Q 011979          216 NKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD  295 (473)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~  295 (473)
                      +..                                  ..++.+ +++|+||+.+.||++.+++|+..+.+          
T Consensus       284 gl~----------------------------------~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~----------  318 (473)
T TIGR02095       284 GLP----------------------------------VDDDVP-LFGVISRLTQQKGVDLLLAALPELLE----------  318 (473)
T ss_pred             CCC----------------------------------ccCCCC-EEEEEecCccccChHHHHHHHHHHHH----------
Confidence            411                                  112344 89999999999999999999999876          


Q ss_pred             CchhhHHHhhhccCccccCCCEEEEEEcCCC--ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCC
Q 011979          296 STNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS  373 (473)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~--~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~  373 (473)
                                         .+++|+|+|+|+  ..+.+++++++++ .++.+.+. .+.+++..+|+.||++++   ||.
T Consensus       319 -------------------~~~~lvi~G~g~~~~~~~l~~~~~~~~-~~v~~~~~-~~~~~~~~~~~~aDv~l~---pS~  374 (473)
T TIGR02095       319 -------------------LGGQLVVLGTGDPELEEALRELAERYP-GNVRVIIG-YDEALAHLIYAGADFILM---PSR  374 (473)
T ss_pred             -------------------cCcEEEEECCCCHHHHHHHHHHHHHCC-CcEEEEEc-CCHHHHHHHHHhCCEEEe---CCC
Confidence                               359999999995  3466777777665 57888887 788889999999999999   788


Q ss_pred             CCCCcHHHHHHHhcCCcEEEeccCccccceecC------CceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011979          374 GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD------KNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE  445 (473)
Q Consensus       374 ~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~------~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~  445 (473)
                      .|+||++++|||+||+|+|+++.+|+.|+|.++      .+|++++  |+++++++|.++++...++++.+++|++++.+
T Consensus       375 ~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~  454 (473)
T TIGR02095       375 FEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAMS  454 (473)
T ss_pred             cCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc
Confidence            999999999999999999999999999999988      8999996  79999999999887433358889999999864


Q ss_pred             hccccchHHHHHHHHH
Q 011979          446 MGLSARWATEWEEHAK  461 (473)
Q Consensus       446 ~~~~~~w~~~~~~~~~  461 (473)
                        +.|+|+...+++.+
T Consensus       455 --~~fsw~~~a~~~~~  468 (473)
T TIGR02095       455 --QDFSWDKSAKQYVE  468 (473)
T ss_pred             --cCCCcHHHHHHHHH
Confidence              47999988877543

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

Probab=100.00  E-value=2.7e-31  Score=275.00  Aligned_cols=344  Identities=14%  Similarity=0.138  Sum_probs=240.5

Q ss_pred             EEEEEecCCC----CChhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCC--cch--hHHH
Q 011979            7 ACVVVLGDLG----RSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGL--PKV--LKPV   78 (473)
Q Consensus         7 ~~i~~~~~~g----~s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~--~~~--~~~~   78 (473)
                      +..+++..+.    ..++++.....+++..-++|+|+|....+........+|+.+++++  ....+..  .++  ...+
T Consensus         5 ~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~   82 (380)
T PRK15484          5 IIFTVTPIFSIPPRGAAAVETWIYQVAKRTSIPNRIACIKNPGYPEYTKVNDNCDIHYIG--FSRIYKRLFQKWTRLDPL   82 (380)
T ss_pred             EEEEeccCCCCCCccccHHHHHHHHhhhhccCCeeEEEecCCCCCchhhccCCCceEEEE--eccccchhhhhhhccCch
Confidence            4444554442    3566777667777554679999998766522232456678888885  1111100  110  0111


Q ss_pred             HHHHHHHHHHHHHHHHHhh--hhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHH
Q 011979           79 LLLLKPLIQFFMLLWFLCV--KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIY  156 (473)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~--~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~  156 (473)
                      .+...+        +..+.  +..++|+||+|+.+   .. ...+.....+.|+++++|+.+.        +        
T Consensus        83 ~~~~~~--------~~~~~~~~~~~~~vi~v~~~~---~~-~~~~~~~~~~~~~v~~~h~~~~--------~--------  134 (380)
T PRK15484         83 PYSQRI--------LNIAHKFTITKDSVIVIHNSM---KL-YRQIRERAPQAKLVMHMHNAFE--------P--------  134 (380)
T ss_pred             hHHHHH--------HHHHHhcCCCCCcEEEEeCcH---Hh-HHHHHhhCCCCCEEEEEecccC--------h--------
Confidence            111111        11111  23569999999943   22 2444555677899999998721        0        


Q ss_pred             HHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-ceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcC
Q 011979          157 RWIEKYYGKMANGCLCVTQAMQHELAQNWGI-KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGME  234 (473)
Q Consensus       157 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g~-~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  234 (473)
                           ...+.++.++++|+.+++.+.+.++. ++.++|||.+ +.|.+..   ...++.+++                  
T Consensus       135 -----~~~~~~~~ii~~S~~~~~~~~~~~~~~~i~vIpngvd~~~~~~~~---~~~~~~~~~------------------  188 (380)
T PRK15484        135 -----ELLDKNAKIIVPSQFLKKFYEERLPNADISIVPNGFCLETYQSNP---QPNLRQQLN------------------  188 (380)
T ss_pred             -----hHhccCCEEEEcCHHHHHHHHhhCCCCCEEEecCCCCHHHcCCcc---hHHHHHHhC------------------
Confidence                 11135799999999999998875543 4889999944 5565432   222333333                  


Q ss_pred             CCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccC
Q 011979          235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY  314 (473)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (473)
                                        .+++. .+++|+|++.+.||++.|++|+..+.++                           .
T Consensus       189 ------------------~~~~~-~~il~~Grl~~~Kg~~~Li~A~~~l~~~---------------------------~  222 (380)
T PRK15484        189 ------------------ISPDE-TVLLYAGRISPDKGILLLMQAFEKLATA---------------------------H  222 (380)
T ss_pred             ------------------CCCCC-eEEEEeccCccccCHHHHHHHHHHHHHh---------------------------C
Confidence                              22223 3899999999999999999999998763                           6


Q ss_pred             CCEEEEEEcCCCCh---------HHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCC-CCCCCcHHHHHH
Q 011979          315 PRLLFIITGKGPDK---------ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDM  384 (473)
Q Consensus       315 ~~~~l~ivG~g~~~---------~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s-~~e~~p~kv~Ea  384 (473)
                      |+++|+|+|+|+..         +.+++++++++ .+|.|+|+ ++.+++..+|+.||++|+   || ..|+||++++||
T Consensus       223 p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~-~~v~~~G~-~~~~~l~~~~~~aDv~v~---pS~~~E~f~~~~lEA  297 (380)
T PRK15484        223 SNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIG-DRCIMLGG-QPPEKMHNYYPLADLVVV---PSQVEEAFCMVAVEA  297 (380)
T ss_pred             CCeEEEEEeCCccccccchhHHHHHHHHHHHhcC-CcEEEeCC-CCHHHHHHHHHhCCEEEe---CCCCccccccHHHHH
Confidence            89999999988632         23444555555 58999998 999999999999999999   56 469999999999


Q ss_pred             HhcCCcEEEeccCccccceecCCceEE-eC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHH
Q 011979          385 FGCGLPVCAVSYSCIEELVKVDKNGLL-FS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHA  460 (473)
Q Consensus       385 ma~G~PvI~~~~~~~~e~i~~~~~G~~-~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~  460 (473)
                      ||||+|||+++.+|+.|++.++.+|++ ++  |+++++++|.+++++    ++ +.+|++++++.. ++|+|+...+++.
T Consensus       298 ma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d----~~-~~~~~~~ar~~~~~~fsw~~~a~~~~  372 (380)
T PRK15484        298 MAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLAD----PE-LTQIAEQAKDFVFSKYSWEGVTQRFE  372 (380)
T ss_pred             HHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcC----HH-HHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            999999999999999999999999984 43  799999999999985    65 467999998765 6899887776644


Q ss_pred             HH
Q 011979          461 KP  462 (473)
Q Consensus       461 ~~  462 (473)
                      +.
T Consensus       373 ~~  374 (380)
T PRK15484        373 EQ  374 (380)
T ss_pred             HH
Confidence            43

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2e-31  Score=269.89  Aligned_cols=329  Identities=17%  Similarity=0.139  Sum_probs=229.3

Q ss_pred             CCCCChhHHH-HHHHHHhhCCCcEEEEecCCCCC-CcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 011979           14 DLGRSPRMQY-QALSLARQMSLEVDVVAYGGSKP-HAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFML   91 (473)
Q Consensus        14 ~~g~s~r~~~-~a~~L~~~~g~eV~vi~~~~~~~-~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (473)
                      +.||..+... .+..|.+. ||+|++++...... ........++.+++++  ..    .......+..+.+.       
T Consensus        10 ~~GG~~~~~~~l~~~L~~~-~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~-------   75 (358)
T cd03812          10 NRGGIETFIMNYYRNLDRS-KIQFDFLVTSKEEGDYDDEIEKLGGKIYYIP--AR----KKNPLKYFKKLYKL-------   75 (358)
T ss_pred             CCccHHHHHHHHHHhcCcc-ceEEEEEEeCCCCcchHHHHHHcCCeEEEec--CC----CccHHHHHHHHHHH-------
Confidence            4555555543 34555554 99999999765431 2223345577777655  11    11112222222221       


Q ss_pred             HHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCe-EEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEE
Q 011979           92 LWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSA-FIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGC  170 (473)
Q Consensus        92 ~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~v  170 (473)
                          + +..+||+||++++.  .......+.+. .+.| ++++.|+..+..      .........+++++.+.+.++.+
T Consensus        76 ----~-~~~~~Dvv~~~~~~--~~~~~~~~~~~-~~~~~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~  141 (358)
T cd03812          76 ----I-KKNKYDIVHVHGSS--ASGFILLAAKK-AGVKVRIAHSHNTSDSH------DKKKKILKYKVLRKLINRLATDY  141 (358)
T ss_pred             ----H-hcCCCCEEEEeCcc--hhHHHHHHHhh-CCCCeEEEEeccccccc------cccchhhHHHHHHHHHHhcCCEE
Confidence                1 23789999999965  22222333333 4444 567888874211      11111111146677788899999


Q ss_pred             EEcCHHHHHHHHHHh-CCceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccc
Q 011979          171 LCVTQAMQHELAQNW-GIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAG  248 (473)
Q Consensus       171 i~vS~~~~~~l~~~~-g~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (473)
                      +++|+..++.+.+.. +.++.+++|+.+ +.|.+... .+.. +...+                                
T Consensus       142 i~~s~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~-~~~~-~~~~~--------------------------------  187 (358)
T cd03812         142 LACSEEAGKWLFGKVKNKKFKVIPNGIDLEKFIFNEE-IRKK-RRELG--------------------------------  187 (358)
T ss_pred             EEcCHHHHHHHHhCCCcccEEEEeccCcHHHcCCCch-hhhH-HHHcC--------------------------------
Confidence            999999998887642 234899999954 44433321 1111 11111                                


Q ss_pred             cccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh
Q 011979          249 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK  328 (473)
Q Consensus       249 ~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~  328 (473)
                          ..+ .+..++|+|++.+.||++.+++|+..+.++                           .++++++|+|+|+..
T Consensus       188 ----~~~-~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~ivG~g~~~  235 (358)
T cd03812         188 ----ILE-DKFVIGHVGRFSEQKNHEFLIEIFAELLKK---------------------------NPNAKLLLVGDGELE  235 (358)
T ss_pred             ----CCC-CCEEEEEEeccccccChHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCchH
Confidence                122 334899999999999999999999999873                           689999999999999


Q ss_pred             HHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCC
Q 011979          329 ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK  407 (473)
Q Consensus       329 ~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~  407 (473)
                      +.+++.++++++ ++|.++|+   .+++.++|+.||++|+   ||..|++|++++||||+|+|||+++.++..+++.++.
T Consensus       236 ~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~v~---ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~~~  309 (358)
T cd03812         236 EEIKKKVKELGLEDKVIFLGV---RNDVPELLQAMDVFLF---PSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTDLV  309 (358)
T ss_pred             HHHHHHHHhcCCCCcEEEecc---cCCHHHHHHhcCEEEe---cccccCCCHHHHHHHHhCCCEEEEcCCchhhhhccCc
Confidence            999999999998 79999997   7899999999999999   6778999999999999999999999999999998844


Q ss_pred             ceEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 011979          408 NGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM  446 (473)
Q Consensus       408 ~G~~~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~  446 (473)
                      .++..+ ++++++++|.+++++    ++.+++++.++...
T Consensus       310 ~~~~~~~~~~~~a~~i~~l~~~----~~~~~~~~~~~~~~  345 (358)
T cd03812         310 KFLSLDESPEIWAEEILKLKSE----DRRERSSESIKKKG  345 (358)
T ss_pred             cEEeCCCCHHHHHHHHHHHHhC----cchhhhhhhhhhcc
Confidence            444444 479999999999996    77788777777663

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5e-31  Score=262.42  Aligned_cols=345  Identities=20%  Similarity=0.220  Sum_probs=246.6

Q ss_pred             EEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHH
Q 011979            7 ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLI   86 (473)
Q Consensus         7 ~~i~~~~~~g~s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (473)
                      ++++.....|....+...+..|.++ ||+|++++.......  .....+++++.++....   .... ...+....++. 
T Consensus         2 Il~i~~~~~g~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~-   73 (359)
T cd03808           2 ILHIVTVDGGLYSFRLPLIKALRAA-GYEVHVVAPPGDELE--ELEALGVKVIPIPLDRR---GINP-FKDLKALLRLY-   73 (359)
T ss_pred             eeEEEecchhHHHHHHHHHHHHHhc-CCeeEEEecCCCccc--ccccCCceEEecccccc---ccCh-HhHHHHHHHHH-
Confidence            3444444344455566677788776 999999997654432  34566888888872211   1111 11111111111 


Q ss_pred             HHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHh-hCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhh
Q 011979           87 QFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK  165 (473)
Q Consensus        87 ~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  165 (473)
                             ..+ +..+||+||++...  +.. .+.+.++ ....++++..|+.++..     .........+..+++...+
T Consensus        74 -------~~~-~~~~~dvv~~~~~~--~~~-~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~  137 (359)
T cd03808          74 -------RLL-RKERPDIVHTHTPK--PGI-LGRLAARLAGVPKVIYTVHGLGFVF-----TSGGLKRRLYLLLERLALR  137 (359)
T ss_pred             -------HHH-HhcCCCEEEEcccc--chh-HHHHHHHHcCCCCEEEEecCcchhh-----ccchhHHHHHHHHHHHHHh
Confidence                   111 33789999998742  222 3444554 56678888889875321     1122244566778888889


Q ss_pred             cCCEEEEcCHHHHHHHHHHhCC----ceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccc
Q 011979          166 MANGCLCVTQAMQHELAQNWGI----KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE  240 (473)
Q Consensus       166 ~ad~vi~vS~~~~~~l~~~~g~----~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  240 (473)
                      .+|.++++|+.+++.+.+....    ...+.+++.+ +.+.+...                                   
T Consensus       138 ~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------  182 (359)
T cd03808         138 FTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPE-----------------------------------  182 (359)
T ss_pred             hccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCcccc-----------------------------------
Confidence            9999999999999999886543    2344444432 22221110                                   


Q ss_pred             hhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEE
Q 011979          241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI  320 (473)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  320 (473)
                                 . .++.+..++|+|++.+.||++.+++++..+.+                           ..++++|+
T Consensus       183 -----------~-~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~---------------------------~~~~~~l~  223 (359)
T cd03808         183 -----------P-IPEDDPVFLFVARLLKDKGIDELLEAARILKA---------------------------KGPNVRLL  223 (359)
T ss_pred             -----------c-cCCCCcEEEEEeccccccCHHHHHHHHHHHHh---------------------------cCCCeEEE
Confidence                       0 12234499999999999999999999999876                           26889999


Q ss_pred             EEcCCCChHHHHHH-HHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc
Q 011979          321 ITGKGPDKESYEEK-IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC  398 (473)
Q Consensus       321 ivG~g~~~~~l~~~-~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~  398 (473)
                      |+|.++........ +...+. ++|.+.|.   .+++..+|+.||++++   ++..|++|++++|||+||+|||+++.++
T Consensus       224 i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~i~---ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~  297 (359)
T cd03808         224 LVGDGDEENPAAILEIEKLGLEGRVEFLGF---RDDVPELLAAADVFVL---PSYREGLPRVLLEAMAMGRPVIATDVPG  297 (359)
T ss_pred             EEcCCCcchhhHHHHHHhcCCcceEEEeec---cccHHHHHHhccEEEe---cCcccCcchHHHHHHHcCCCEEEecCCC
Confidence            99999876555543 666666 79999998   8899999999999999   6767999999999999999999999999


Q ss_pred             cccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh-ccccchHHHHHHH
Q 011979          399 IEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM-GLSARWATEWEEH  459 (473)
Q Consensus       399 ~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~~~~~  459 (473)
                      ..+++.++.+|++++  |+++++++|.+++.+    ++.++++++++++. .+.++|+...++.
T Consensus       298 ~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~~  357 (359)
T cd03808         298 CREAVIDGVNGFLVPPGDAEALADAIERLIED----PELRARMGQAARKRAEEEFDEEIVVKKL  357 (359)
T ss_pred             chhhhhcCcceEEECCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhcCHHHHHHHh
Confidence            999999899999996  699999999999885    88999999999988 4789888776654

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5.5e-31  Score=263.16  Aligned_cols=350  Identities=21%  Similarity=0.212  Sum_probs=253.3

Q ss_pred             eEEEEEecCCCCChhHH-HHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHH
Q 011979            6 RACVVVLGDLGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP   84 (473)
Q Consensus         6 ~~~i~~~~~~g~s~r~~-~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (473)
                      +++++.....||.+++. ..+..|.++ |++|.+++..............+++++.++.  ...   .........+.+.
T Consensus         2 i~~i~~~~~~gG~~~~~~~l~~~l~~~-~~~v~~~~~~~~~~~~~~~~~~~i~v~~~~~--~~~---~~~~~~~~~~~~~   75 (365)
T cd03807           2 VLHVITGLDVGGAERMLVRLLKGLDRD-RFEHVVISLTDRGELGEELEEAGVPVYCLGK--RPG---RPDPGALLRLYKL   75 (365)
T ss_pred             eEEEEeeccCccHHHHHHHHHHHhhhc-cceEEEEecCcchhhhHHHHhcCCeEEEEec--ccc---cccHHHHHHHHHH
Confidence            44555555567777765 455666676 9999999976443333333456888888872  111   1111122222222


Q ss_pred             HHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhh-CCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHH
Q 011979           85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY  163 (473)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~  163 (473)
                      +            +..+||+||++.+....   ...+.... .+.+++++.|+.....       .........++++.+
T Consensus        76 ~------------~~~~~div~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~~~~~~  133 (365)
T cd03807          76 I------------RRLRPDVVHTWMYHADL---YGGLAARLAGVPPVIWGIRHSDLDL-------GKKSTRLVARLRRLL  133 (365)
T ss_pred             H------------HhhCCCEEEeccccccH---HHHHHHHhcCCCcEEEEecCCcccc-------cchhHhHHHHHHHHh
Confidence            2            23789999998754222   23334444 6889999999984311       122334556778888


Q ss_pred             hhcCCEEEEcCHHHHHHHHHHhCCc---eEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCcc
Q 011979          164 GKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKAD  239 (473)
Q Consensus       164 ~~~ad~vi~vS~~~~~~l~~~~g~~---~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  239 (473)
                      .+.+|.++++|+..++.+.+. +.+   +.+++|+.+ ..|.+... .+...+.+++                       
T Consensus       134 ~~~~~~~i~~s~~~~~~~~~~-~~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~-----------------------  188 (365)
T cd03807         134 SSFIPLIVANSAAAAEYHQAI-GYPPKKIVVIPNGVDTERFSPDLD-ARARLREELG-----------------------  188 (365)
T ss_pred             ccccCeEEeccHHHHHHHHHc-CCChhheeEeCCCcCHHhcCCccc-chHHHHHhcC-----------------------
Confidence            888999999999999888874 443   778899843 44433321 2222222322                       


Q ss_pred             chhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEE
Q 011979          240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF  319 (473)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  319 (473)
                                   +++ .+..++|+|++.+.||++.+++|+..+.++                           .++++|
T Consensus       189 -------------~~~-~~~~i~~~G~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~l  227 (365)
T cd03807         189 -------------LPE-DTFLIGIVARLHPQKDHATLLRAAALLLKK---------------------------FPNARL  227 (365)
T ss_pred             -------------CCC-CCeEEEEecccchhcCHHHHHHHHHHHHHh---------------------------CCCeEE
Confidence                         222 234899999999999999999999998773                           688999


Q ss_pred             EEEcCCCChHHHHHHHH-HcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC
Q 011979          320 IITGKGPDKESYEEKIR-RLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS  397 (473)
Q Consensus       320 ~ivG~g~~~~~l~~~~~-~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~  397 (473)
                      +++|.|+....+++... ++++ ++|.+.|.   .+++..+|+.||++++   ||..|++|++++|||+||+|||+++.+
T Consensus       228 ~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~v~---ps~~e~~~~~~~Ea~a~g~PvI~~~~~  301 (365)
T cd03807         228 LLVGDGPDRANLELLALKELGLEDKVILLGE---RSDVPALLNALDVFVL---SSLSEGFPNVLLEAMACGLPVVATDVG  301 (365)
T ss_pred             EEecCCcchhHHHHHHHHhcCCCceEEEccc---cccHHHHHHhCCEEEe---CCccccCCcHHHHHHhcCCCEEEcCCC
Confidence            99999988887887777 7888 79999987   6899999999999999   676799999999999999999999999


Q ss_pred             ccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHHH
Q 011979          398 CIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAK  461 (473)
Q Consensus       398 ~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~  461 (473)
                      +..+++.+  +|++++  |+++++++|.+++++    ++.+.++++++++.. +.++|+...++..+
T Consensus       302 ~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~  362 (365)
T cd03807         302 DNAELVGD--TGFLVPPGDPEALAEAIEALLAD----PALRQALGEAARERIEENFSIEAMVEAYEE  362 (365)
T ss_pred             ChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhC----hHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            99999976  888885  799999999999995    788899999998876 56898887776544

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=100.00  E-value=8e-31  Score=287.28  Aligned_cols=370  Identities=17%  Similarity=0.128  Sum_probs=242.7

Q ss_pred             CeEEEEEecCCCCChhHHH-HHHHHHhhCCC------------cEEEEec--CC---CCCCcccccCCCEEEEEeecCCC
Q 011979            5 GRACVVVLGDLGRSPRMQY-QALSLARQMSL------------EVDVVAY--GG---SKPHAAILEHPSIHIHTMTQWPT   66 (473)
Q Consensus         5 ~~~~i~~~~~~g~s~r~~~-~a~~L~~~~g~------------eV~vi~~--~~---~~~~~~~~~~~~i~i~~~~~~~~   66 (473)
                      |+++++.....||++|+.. ++..+.+. ++            ++.|++.  ..   ...........|+.++.++..+ 
T Consensus       283 rIl~vi~sl~~GGAEr~~~~La~~l~~~-~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~~~~L~~~Gv~v~~l~~~~-  360 (694)
T PRK15179        283 PVLMINGSLGAGGAERQFVNTAVALQSA-IQQGQSIAGYGVLGPVQVVCRSLRSREGADFFAATLADAGIPVSVYSDMQ-  360 (694)
T ss_pred             eEEEEeCCCCCCcHHHHHHHHHHHHHhc-ccCcccccCccCCCCcEEEEEecccccCcchHHHHHHhCCCeEEEeccCC-
Confidence            4455666666788888775 45566664 43            3455543  11   1112223336799999987322 


Q ss_pred             CCCCCcchhHHHHHHHHH-------HHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEE-EecCch
Q 011979           67 IPRGLPKVLKPVLLLLKP-------LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV-DWHNFG  138 (473)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~-~~h~~~  138 (473)
                       ..+.......+..+.+.       ......-+..++ +..+||+||+|.+   ....++.++++..++|+|+ +.|++.
T Consensus       361 -~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~l-k~~kpDIVH~h~~---~a~~lg~lAa~~~gvPvIv~t~h~~~  435 (694)
T PRK15179        361 -AWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVM-RSSVPSVVHIWQD---GSIFACALAALLAGVPRIVLSVRTMP  435 (694)
T ss_pred             -ccCcccccccchhhHHHhhhcchhHHHHHHHHHHHH-HHcCCcEEEEeCC---cHHHHHHHHHHHcCCCEEEEEeCCCc
Confidence             11111100000000000       000001111222 3378999999984   3334566777777889876 567652


Q ss_pred             hhhhhhhcCCCchHHHHHHHHHHHHh-hcCCEEEEcCHHHHHHHHHHhCCc---eEEeeCCC-CCCcccCChhHHHHHHH
Q 011979          139 YTLLSLSLGRRSHFVSIYRWIEKYYG-KMANGCLCVTQAMQHELAQNWGIK---ATVLYDQP-PEFFHPTSLEEKHELFC  213 (473)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~e~~~~-~~ad~vi~vS~~~~~~l~~~~g~~---~~vi~n~~-~~~f~~~~~~~~~~l~~  213 (473)
                      ...      ....+...+..+.+.+. ..++.+++.|...++.+.+.++.+   +.|||||. .+.|.+... .+. .+.
T Consensus       436 ~~~------~~~~~~~~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~-~~~-~~~  507 (694)
T PRK15179        436 PVD------RPDRYRVEYDIIYSELLKMRGVALSSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDA-CTA-MMA  507 (694)
T ss_pred             ccc------chhHHHHHHHHHHHHHHhcCCeEEEeCcHHHHHHHHHHcCCChhHEEEECCCcCHHhcCCCch-hhH-HHH
Confidence            110      11111122222222222 234567777888888887767764   88999994 455644321 111 111


Q ss_pred             hhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhcc
Q 011979          214 RLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE  293 (473)
Q Consensus       214 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~  293 (473)
                      .+..                                  .. ++...+++++||+.+.||++.+++|+..+.++       
T Consensus       508 ~~~~----------------------------------~~-~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~-------  545 (694)
T PRK15179        508 QFDA----------------------------------RT-SDARFTVGTVMRVDDNKRPFLWVEAAQRFAAS-------  545 (694)
T ss_pred             hhcc----------------------------------cc-CCCCeEEEEEEeCCccCCHHHHHHHHHHHHHH-------
Confidence            1110                                  01 12233899999999999999999999988763       


Q ss_pred             CCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCC
Q 011979          294 DDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS  372 (473)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s  372 (473)
                                          .|+++|+|+|+|+..+.++++++++++ ++|.|+|+   .++++.+|+.+|++|+   +|
T Consensus       546 --------------------~p~~~LvIvG~G~~~~~L~~l~~~lgL~~~V~flG~---~~dv~~ll~aaDv~Vl---pS  599 (694)
T PRK15179        546 --------------------HPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGL---SRRVGYWLTQFNAFLL---LS  599 (694)
T ss_pred             --------------------CcCeEEEEEccCcchHHHHHHHHHcCCCCcEEEcCC---cchHHHHHHhcCEEEe---cc
Confidence                                689999999999999999999999999 89999998   5789999999999999   68


Q ss_pred             CCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC--C--HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-
Q 011979          373 SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--S--SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-  447 (473)
Q Consensus       373 ~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~--~--~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-  447 (473)
                      ..|+||++++|||+||+|||+|+.+|+.|+|.++.+|++++  |  .++|+++|.+++.+...+    ..+++++++.. 
T Consensus       600 ~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~----~~l~~~ar~~a~  675 (694)
T PRK15179        600 RFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAAD----PGIARKAADWAS  675 (694)
T ss_pred             ccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhcc----HHHHHHHHHHHH
Confidence            88999999999999999999999999999999999999996  4  468999999988753333    34566666655 


Q ss_pred             cccchHHHHHHHHH
Q 011979          448 LSARWATEWEEHAK  461 (473)
Q Consensus       448 ~~~~w~~~~~~~~~  461 (473)
                      ++|+|+...+++..
T Consensus       676 ~~FS~~~~~~~~~~  689 (694)
T PRK15179        676 ARFSLNQMIASTVR  689 (694)
T ss_pred             HhCCHHHHHHHHHH
Confidence            58999988777543

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria

Probab=100.00  E-value=2.5e-31  Score=268.14  Aligned_cols=264  Identities=22%  Similarity=0.201  Sum_probs=213.3

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      ..++|+||+|.+..  ...+..+.++..++|++++.|+...       ......     +.++...+.+|.++++|+.++
T Consensus        77 ~~~~Dii~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-----~~~~~~~~~~~~vi~~s~~~~  142 (355)
T cd03799          77 RLGIDHIHAHFGTT--PATVAMLASRLGGIPYSFTAHGKDI-------FRSPDA-----IDLDEKLARADFVVAISEYNR  142 (355)
T ss_pred             hcCCCEEEECCCCc--hHHHHHHHHHhcCCCEEEEEecccc-------cccCch-----HHHHHHHhhCCEEEECCHHHH
Confidence            37899999998642  2224556666668999999997631       111110     345666788999999999999


Q ss_pred             HHHHHHhCC---ceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccC
Q 011979          179 HELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK  254 (473)
Q Consensus       179 ~~l~~~~g~---~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (473)
                      +.+.+.++.   ++.+++|+.+ +.|.+..                                               ...
T Consensus       143 ~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~-----------------------------------------------~~~  175 (355)
T cd03799         143 QQLIRLLGCDPDKIHVVHCGVDLERFPPRP-----------------------------------------------PPP  175 (355)
T ss_pred             HHHHHhcCCCcccEEEEeCCcCHHHcCCcc-----------------------------------------------ccc
Confidence            999886443   3789999854 3332221                                               001


Q ss_pred             CCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHH
Q 011979          255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK  334 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~  334 (473)
                      .+.+..++|+|++.+.||++.+++++..+.+                           ..++++++++|.|+..+.+++.
T Consensus       176 ~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~---------------------------~~~~~~l~i~G~~~~~~~~~~~  228 (355)
T cd03799         176 PGEPLRILSVGRLVEKKGLDYLLEALALLKD---------------------------RGIDFRLDIVGDGPLRDELEAL  228 (355)
T ss_pred             cCCCeEEEEEeeeccccCHHHHHHHHHHHhh---------------------------cCCCeEEEEEECCccHHHHHHH
Confidence            1234489999999999999999999999876                           2578999999999999999999


Q ss_pred             HHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCC------CCCcHHHHHHHhcCCcEEEeccCccccceecCC
Q 011979          335 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG------LDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK  407 (473)
Q Consensus       335 ~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~------e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~  407 (473)
                      ++++++ ++|.+.|. ++.+++..+|++||++++|   |..      |++|++++|||+||+|||+++.++..+++.++.
T Consensus       229 ~~~~~~~~~v~~~g~-~~~~~l~~~~~~adi~l~~---s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~  304 (355)
T cd03799         229 IAELGLEDRVTLLGA-KSQEEVRELLRAADLFVLP---SVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGE  304 (355)
T ss_pred             HHHcCCCCeEEECCc-CChHHHHHHHHhCCEEEec---ceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCC
Confidence            999988 79999998 9999999999999999994   544      999999999999999999999999999999998


Q ss_pred             ceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHH
Q 011979          408 NGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEE  458 (473)
Q Consensus       408 ~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~  458 (473)
                      +|++++  |+++++++|.+++++    ++.+.++++++++.. +.++|+...++
T Consensus       305 ~g~~~~~~~~~~l~~~i~~~~~~----~~~~~~~~~~a~~~~~~~~s~~~~~~~  354 (355)
T cd03799         305 TGLLVPPGDPEALADAIERLLDD----PELRREMGEAGRARVEEEFDIRKQAAR  354 (355)
T ss_pred             ceEEeCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence            999996  799999999999985    788999999999876 67998877653

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5.5e-31  Score=265.88  Aligned_cols=336  Identities=16%  Similarity=0.179  Sum_probs=243.0

Q ss_pred             cCCCCChhHHH-HHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 011979           13 GDLGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFML   91 (473)
Q Consensus        13 ~~~g~s~r~~~-~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (473)
                      ++.||.+++.. .+..|.++ ||+|+|++....... ......++.+++++.... .....   .........       
T Consensus        11 p~~gG~~~~~~~l~~~L~~~-g~~v~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~-------   77 (357)
T cd03795          11 PDRGGIEQVIRDLAEGLAAR-GIEVAVLCASPEPKG-RDEERNGHRVIRAPSLLN-VASTP---FSPSFFKQL-------   77 (357)
T ss_pred             CCCCcHHHHHHHHHHHHHhC-CCceEEEecCCCCcc-hhhhccCceEEEeecccc-ccccc---ccHHHHHHH-------
Confidence            44666666654 45677776 999999997654332 222344666777663211 11111   000100000       


Q ss_pred             HHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEE
Q 011979           92 LWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCL  171 (473)
Q Consensus        92 ~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi  171 (473)
                        .  .+..++|+||++.+......  ..+.. .++.|+++++|+...        ........+.++++.+.+.+|.++
T Consensus        78 --~--~~~~~~Dii~~~~~~~~~~~--~~~~~-~~~~~~i~~~h~~~~--------~~~~~~~~~~~~~~~~~~~~d~vi  142 (357)
T cd03795          78 --K--KLAKKADVIHLHFPNPLADL--ALLLL-PRKKPVVVHWHSDIV--------KQKLLLKLYRPLQRRFLRRADAIV  142 (357)
T ss_pred             --H--hcCCCCCEEEEecCcchHHH--HHHHh-ccCceEEEEEcChhh--------ccchhhhhhhHHHHHHHHhcCEEE
Confidence              0  12478999999986554333  22222 257899999997632        122344556677888889999999


Q ss_pred             EcCHHHHHHHHHHhC--CceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccc
Q 011979          172 CVTQAMQHELAQNWG--IKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAG  248 (473)
Q Consensus       172 ~vS~~~~~~l~~~~g--~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (473)
                      ++|+.+++.+....+  .++.+++|+.+ ..|.+... ...   ..                                  
T Consensus       143 ~~s~~~~~~~~~~~~~~~~~~~i~~gi~~~~~~~~~~-~~~---~~----------------------------------  184 (357)
T cd03795         143 ATSPNYAETSPVLRRFRDKVRVIPLGLDPARYPRPDA-LEE---AI----------------------------------  184 (357)
T ss_pred             eCcHHHHHHHHHhcCCccceEEecCCCChhhcCCcch-hhh---Hh----------------------------------
Confidence            999999988776543  34888999854 44433321 110   00                                  


Q ss_pred             cccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh
Q 011979          249 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK  328 (473)
Q Consensus       249 ~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~  328 (473)
                         ...+..+..++|+|++.+.||++.+++|++.+                              . +++|+|+|+|+..
T Consensus       185 ---~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l------------------------------~-~~~l~i~G~g~~~  230 (357)
T cd03795         185 ---WRRAAGRPFFLFVGRLVYYKGLDVLLEAAAAL------------------------------P-DAPLVIVGEGPLE  230 (357)
T ss_pred             ---hcCCCCCcEEEEecccccccCHHHHHHHHHhc------------------------------c-CcEEEEEeCChhH
Confidence               01122234899999999999999999999986                              2 6999999999998


Q ss_pred             HHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceec-C
Q 011979          329 ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV-D  406 (473)
Q Consensus       329 ~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~-~  406 (473)
                      +.+++.++++++ ++|.|+|. ++.+++..+++.||++++|.. +..|++|++++|||+||+|||+++.++..+.+.+ +
T Consensus       231 ~~~~~~~~~~~~~~~V~~~g~-v~~~~~~~~~~~ad~~i~ps~-~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~  308 (357)
T cd03795         231 AELEALAAALGLLDRVRFLGR-LDDEEKAALLAACDVFVFPSV-ERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHG  308 (357)
T ss_pred             HHHHHHHHhcCCcceEEEcCC-CCHHHHHHHHHhCCEEEeCCc-ccccccchHHHHHHHcCCCEEecCCCCchhHHhhCC
Confidence            999999988888 89999998 999999999999999999421 1468999999999999999999999999998886 8


Q ss_pred             CceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHH
Q 011979          407 KNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWAT  454 (473)
Q Consensus       407 ~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~  454 (473)
                      .+|++++  |+++++++|.+++++    ++.+++|++++++.. +.++|+.
T Consensus       309 ~~g~~~~~~d~~~~~~~i~~l~~~----~~~~~~~~~~~~~~~~~~~s~~~  355 (357)
T cd03795         309 VTGLVVPPGDPAALAEAIRRLLED----PELRERLGEAARERAEEEFTADR  355 (357)
T ss_pred             CceEEeCCCCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHhcchHh
Confidence            9999985  799999999999995    899999999999987 6688764

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>PLN02949 transferase, transferring glycosyl groups

Probab=100.00  E-value=7.5e-31  Score=277.63  Aligned_cols=231  Identities=17%  Similarity=0.232  Sum_probs=185.3

Q ss_pred             HHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCc--eEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCc
Q 011979          157 RWIEKYYGKMANGCLCVTQAMQHELAQNWGIK--ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGM  233 (473)
Q Consensus       157 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g~~--~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  233 (473)
                      .++++...+.||.++|+|+.+++.+.+.++.+  +.++|++.+ +.+...+.                            
T Consensus       211 ~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~~----------------------------  262 (463)
T PLN02949        211 AWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALPL----------------------------  262 (463)
T ss_pred             HHHHHHHcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCCc----------------------------
Confidence            34566777899999999999999998877653  678888743 22211100                            


Q ss_pred             CCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCcccc
Q 011979          234 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL  313 (473)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (473)
                                        ...++++ .++++||+.++||++.+|+|+..+.++..                       -.
T Consensus       263 ------------------~~~~~~~-~il~vGR~~~~Kg~~llI~A~~~l~~~~~-----------------------~~  300 (463)
T PLN02949        263 ------------------ERSEDPP-YIISVAQFRPEKAHALQLEAFALALEKLD-----------------------AD  300 (463)
T ss_pred             ------------------cccCCCC-EEEEEEeeeccCCHHHHHHHHHHHHHhcc-----------------------cc
Confidence                              0111223 89999999999999999999998765200                       01


Q ss_pred             CCCEEEEEEcCCCC------hHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHh
Q 011979          314 YPRLLFIITGKGPD------KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFG  386 (473)
Q Consensus       314 ~~~~~l~ivG~g~~------~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama  386 (473)
                      .|+++|+|+|+|+.      .++++++++++++ ++|.|+|. ++.+++..+|++||+++.   ++..|+||++++||||
T Consensus       301 ~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~-v~~~el~~ll~~a~~~v~---~s~~E~FGivvlEAMA  376 (463)
T PLN02949        301 VPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKN-VSYRDLVRLLGGAVAGLH---SMIDEHFGISVVEYMA  376 (463)
T ss_pred             CCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCC-CCHHHHHHHHHhCcEEEe---CCccCCCChHHHHHHH
Confidence            37899999998742      2568889999999 79999998 999999999999999998   7889999999999999


Q ss_pred             cCCcEEEeccCccc-cceec---CCceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHH
Q 011979          387 CGLPVCAVSYSCIE-ELVKV---DKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKP  462 (473)
Q Consensus       387 ~G~PvI~~~~~~~~-e~i~~---~~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~  462 (473)
                      ||+|||+++.+|.. +++.+   +.+|++++|+++++++|.+++++   +++.+++|++++++.+++|+|+...++..+.
T Consensus       377 ~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~~~~~la~ai~~ll~~---~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~  453 (463)
T PLN02949        377 AGAVPIAHNSAGPKMDIVLDEDGQQTGFLATTVEEYADAILEVLRM---RETERLEIAAAARKRANRFSEQRFNEDFKDA  453 (463)
T ss_pred             cCCcEEEeCCCCCcceeeecCCCCcccccCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence            99999999988864 66655   67899999999999999999985   5788899999999988889999877776554


Q ss_pred             HH
Q 011979          463 LI  464 (473)
Q Consensus       463 ~~  464 (473)
                      +-
T Consensus       454 i~  455 (463)
T PLN02949        454 IR  455 (463)
T ss_pred             HH
Confidence            43

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

Probab=100.00  E-value=1.6e-30  Score=258.25  Aligned_cols=280  Identities=23%  Similarity=0.338  Sum_probs=221.5

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      ..++|+||++++......   .+.++..++|+++++|+..+....   .............++...+.+|.++++|+.++
T Consensus        83 ~~~~Dii~~~~~~~~~~~---~~~~~~~~~~~i~~~h~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~  156 (374)
T cd03801          83 RERFDVVHAHDWLALLAA---ALAARLLGIPLVLTVHGLEFGRPG---NELGLLLKLARALERRALRRADRIIAVSEATR  156 (374)
T ss_pred             hcCCcEEEEechhHHHHH---HHHHHhcCCcEEEEeccchhhccc---cchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence            368999999996544332   255667889999999998532211   01122244556778888889999999999999


Q ss_pred             HHHHHHhCC---ceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccC
Q 011979          179 HELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK  254 (473)
Q Consensus       179 ~~l~~~~g~---~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (473)
                      +.+.+.++.   ++.+++++.+ ..+.+..    .+.+..                                     ...
T Consensus       157 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~-------------------------------------~~~  195 (374)
T cd03801         157 EELRELGGVPPEKITVIPNGVDTERFRPAP----RAARRR-------------------------------------LGI  195 (374)
T ss_pred             HHHHhcCCCCCCcEEEecCcccccccCccc----hHHHhh-------------------------------------cCC
Confidence            999988776   5888999843 4443321    111111                                     112


Q ss_pred             CCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHH
Q 011979          255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK  334 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~  334 (473)
                      ...+..++|+|++...||++.+++++..+.++                           .++++|+++|.++..+.+++.
T Consensus       196 ~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~~~  248 (374)
T cd03801         196 PEDEPVILFVGRLVPRKGVDLLLEALAKLRKE---------------------------YPDVRLVIVGDGPLREELEAL  248 (374)
T ss_pred             cCCCeEEEEecchhhhcCHHHHHHHHHHHhhh---------------------------cCCeEEEEEeCcHHHHHHHHH
Confidence            22334899999999999999999999998773                           578999999999888888888


Q ss_pred             HHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC
Q 011979          335 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS  413 (473)
Q Consensus       335 ~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~  413 (473)
                      +++++. ++|.+.|. ++.+++..+++.||++++   ++..+++|++++|||++|+|||+++.++..+++.++.+|++++
T Consensus       249 ~~~~~~~~~v~~~g~-~~~~~~~~~~~~~di~i~---~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~  324 (374)
T cd03801         249 AAELGLGDRVTFLGF-VPDEDLPALYAAADVFVL---PSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVP  324 (374)
T ss_pred             HHHhCCCcceEEEec-cChhhHHHHHHhcCEEEe---cchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeC
Confidence            888888 79999998 999999999999999999   5655899999999999999999999999999999899999997


Q ss_pred             --CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH-hccccchHHHHHHHH
Q 011979          414 --SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE-MGLSARWATEWEEHA  460 (473)
Q Consensus       414 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~w~~~~~~~~  460 (473)
                        |+++++++|.+++++    ++.++++++++++ ..+.++|+...++..
T Consensus       325 ~~~~~~l~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (374)
T cd03801         325 PGDPEALAEAILRLLDD----PELRRRLGEAARERVAERFSWDRVAARTE  370 (374)
T ss_pred             CCCHHHHHHHHHHHHcC----hHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence              489999999999885    8889999999984 346888887666543

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

Probab=100.00  E-value=2.8e-30  Score=261.04  Aligned_cols=346  Identities=17%  Similarity=0.183  Sum_probs=237.6

Q ss_pred             eEEEEEecCCCCChhHHH-HHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHH
Q 011979            6 RACVVVLGDLGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP   84 (473)
Q Consensus         6 ~~~i~~~~~~g~s~r~~~-~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (473)
                      ++++......||.++... .+..|.+. ||+|++++..+..... ... .......+.   . ......+...+..+.  
T Consensus         2 il~~~~~~~~gG~~~~~~~l~~~L~~~-g~~v~v~~~~~~~~~~-~~~-~~~~~~~~~---~-~~~~~~~~~~~~~~~--   72 (360)
T cd04951           2 ILYVITGLGLGGAEKQVVDLADQFVAK-GHQVAIISLTGESEVK-PPI-DATIILNLN---M-SKNPLSFLLALWKLR--   72 (360)
T ss_pred             eEEEecCCCCCCHHHHHHHHHHhcccC-CceEEEEEEeCCCCcc-chh-hccceEEec---c-cccchhhHHHHHHHH--
Confidence            344443334566666654 34566665 9999999965433211 111 111112222   1 011111111111111  


Q ss_pred             HHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHh-hCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHH
Q 011979           85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY  163 (473)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~  163 (473)
                               .++ +..+||+||+|.+..   ..+..+++. ..+.|++++.|+...         ..   +...+..+..
T Consensus        73 ---------~~~-~~~~pdiv~~~~~~~---~~~~~l~~~~~~~~~~v~~~h~~~~---------~~---~~~~~~~~~~  127 (360)
T cd04951          73 ---------KIL-RQFKPDVVHAHMFHA---NIFARLLRLFLPSPPLICTAHSKNE---------GG---RLRMLAYRLT  127 (360)
T ss_pred             ---------HHH-HhcCCCEEEEcccch---HHHHHHHHhhCCCCcEEEEeeccCc---------hh---HHHHHHHHHH
Confidence                     112 237899999998543   223444444 346789999998731         11   1223445566


Q ss_pred             hhcCCEEEEcCHHHHHHHHHHhCC---ceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCcc
Q 011979          164 GKMANGCLCVTQAMQHELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKAD  239 (473)
Q Consensus       164 ~~~ad~vi~vS~~~~~~l~~~~g~---~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  239 (473)
                      .+.++.++++|+..++++.+..+.   ++.++||+.+ ..|.+.. ..+..++.+++                       
T Consensus       128 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~-~~~~~~~~~~~-----------------------  183 (360)
T cd04951         128 DFLSDLTTNVSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDP-ARRLKIRNALG-----------------------  183 (360)
T ss_pred             hhccCceEEEcHHHHHHHHhccCCCcccEEEEccccchhhcCcch-HHHHHHHHHcC-----------------------
Confidence            667889999999999998876433   3788999844 4554432 22333443332                       


Q ss_pred             chhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEE
Q 011979          240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF  319 (473)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  319 (473)
                                   +.+++ .+++|+|++.+.||++.+++|+..+.++                           .|+++|
T Consensus       184 -------------~~~~~-~~~l~~g~~~~~kg~~~li~a~~~l~~~---------------------------~~~~~l  222 (360)
T cd04951         184 -------------VKNDT-FVILAVGRLVEAKDYPNLLKAFAKLLSD---------------------------YLDIKL  222 (360)
T ss_pred             -------------cCCCC-EEEEEEeeCchhcCcHHHHHHHHHHHhh---------------------------CCCeEE
Confidence                         22333 3899999999999999999999998763                           589999


Q ss_pred             EEEcCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc
Q 011979          320 IITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC  398 (473)
Q Consensus       320 ~ivG~g~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~  398 (473)
                      +|+|+|+..+.+++.++++++ ++|.|+|+   .+++..+|+.||++++   +|..|++|++++|||++|+|||+++.++
T Consensus       223 ~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~ad~~v~---~s~~e~~~~~~~Ea~a~G~PvI~~~~~~  296 (360)
T cd04951         223 LIAGDGPLRATLERLIKALGLSNRVKLLGL---RDDIAAYYNAADLFVL---SSAWEGFGLVVAEAMACELPVVATDAGG  296 (360)
T ss_pred             EEEcCCCcHHHHHHHHHhcCCCCcEEEecc---cccHHHHHHhhceEEe---cccccCCChHHHHHHHcCCCEEEecCCC
Confidence            999999999999999999988 78999998   6899999999999999   6777999999999999999999999999


Q ss_pred             cccceecCCceEEe--CCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHH
Q 011979          399 IEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAK  461 (473)
Q Consensus       399 ~~e~i~~~~~G~~~--~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~  461 (473)
                      ..|++.+  +|+++  +|+++++++|.+++++   +++.++.++++.....+.++|+...+++.+
T Consensus       297 ~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~  356 (360)
T cd04951         297 VREVVGD--SGLIVPISDPEALANKIDEILKM---SGEERDIIGARRERIVKKFSINSIVQQWLT  356 (360)
T ss_pred             hhhEecC--CceEeCCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            9999976  66666  4799999999999965   567777777763334478999877766543

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have

>TIGR02470 sucr_synth sucrose synthase

Probab=100.00  E-value=3e-30  Score=283.05  Aligned_cols=375  Identities=14%  Similarity=0.103  Sum_probs=241.6

Q ss_pred             HHhhCCC----cEEEEecCCCCC--------CcccccCCCEEEEEeecCCCCCCCCcch-hH--HHHHHHHHHHHHHHHH
Q 011979           28 LARQMSL----EVDVVAYGGSKP--------HAAILEHPSIHIHTMTQWPTIPRGLPKV-LK--PVLLLLKPLIQFFMLL   92 (473)
Q Consensus        28 L~~~~g~----eV~vi~~~~~~~--------~~~~~~~~~i~i~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~   92 (473)
                      |+++ ||    +|+|+|......        .+.+...+++++.++|.-+....-++++ ++  .+.++..+...   +.
T Consensus       300 La~~-G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~---~~  375 (784)
T TIGR02470       300 IKLQ-GLEITPKILIVTRLIPDAEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAED---AE  375 (784)
T ss_pred             HHhc-CCCccceEEEEecCCCCccccccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHH---HH
Confidence            3454 99    777999654321        1223335799999998322111011221 11  11222222222   11


Q ss_pred             HHHhhh-hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCc-h--HHHHHH--HHHHHHhhc
Q 011979           93 WFLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRS-H--FVSIYR--WIEKYYGKM  166 (473)
Q Consensus        93 ~~~~~~-~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~-~--~~~~~~--~~e~~~~~~  166 (473)
                      ..+... ..+||+||+|.   +.+..++.+++...++|++.+.|.+.-......-.... .  ...+..  ..|..+...
T Consensus       376 ~~~~~~~~~~pDlIHahy---~d~glva~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~  452 (784)
T TIGR02470       376 KEILAELQGKPDLIIGNY---SDGNLVASLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNA  452 (784)
T ss_pred             HHHHHhcCCCCCEEEECC---CchHHHHHHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhc
Confidence            111111 24799999998   66667789999999999999999885222110000000 0  011111  226677888


Q ss_pred             CCEEEEcCHHHHH----HHHHH-----------h----CC-----ceEEeeCC-CCCCcccCChhH-HH-HHHHhhhhhc
Q 011979          167 ANGCLCVTQAMQH----ELAQN-----------W----GI-----KATVLYDQ-PPEFFHPTSLEE-KH-ELFCRLNKIL  219 (473)
Q Consensus       167 ad~vi~vS~~~~~----~l~~~-----------~----g~-----~~~vi~n~-~~~~f~~~~~~~-~~-~l~~~l~~~~  219 (473)
                      ||.||+.|.....    .+.++           +    |+     ++.++++| +.+.|.|.+... +. .+.......+
T Consensus       453 AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll  532 (784)
T TIGR02470       453 ADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELL  532 (784)
T ss_pred             CCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhc
Confidence            9999999975532    22211           1    22     36889998 446676764322 11 1110000000


Q ss_pred             cCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchh
Q 011979          220 HQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNE  299 (473)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~  299 (473)
                      ..+              ......+      .....+++| +++++||+.+.||++.|++|+..+...             
T Consensus       533 ~~~--------------~~~~~~~------G~l~d~~kp-iIl~VGRL~~~KGid~LIeA~~~l~~l-------------  578 (784)
T TIGR02470       533 FSL--------------EDNDEHY------GYLKDPNKP-IIFSMARLDRVKNLTGLVECYGRSPKL-------------  578 (784)
T ss_pred             cch--------------hhHHHHh------CCCCCCCCc-EEEEEeCCCccCCHHHHHHHHHHhHhh-------------
Confidence            000              0000000      001244566 899999999999999999999887541             


Q ss_pred             hHHHhhhccCccccCCCEEEEEEcCCCC------------hHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHh----cC
Q 011979          300 EVFLKEISDGKQYLYPRLLFIITGKGPD------------KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLG----SA  362 (473)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~l~ivG~g~~------------~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~----~a  362 (473)
                                    .++++|+|+|+|+.            .+.+.++++++++ ++|.|+|...+..+..++|+    .+
T Consensus       579 --------------~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~a  644 (784)
T TIGR02470       579 --------------RELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTK  644 (784)
T ss_pred             --------------CCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccC
Confidence                          35689999998752            1356678899999 89999997346777777775    34


Q ss_pred             cEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHH
Q 011979          363 DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLR  440 (473)
Q Consensus       363 di~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~  440 (473)
                      |++|+   ||..|+||++++||||||+|||+|+.||+.|+|.++.+|++++  |+++++++|.++++....|++.+++|+
T Consensus       645 dVfV~---PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms  721 (784)
T TIGR02470       645 GIFVQ---PALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKIS  721 (784)
T ss_pred             cEEEE---CCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence            79999   7899999999999999999999999999999999999999997  799999999998742223699999999


Q ss_pred             HHHHHhc-cccchHHHHHHHH
Q 011979          441 NGTLEMG-LSARWATEWEEHA  460 (473)
Q Consensus       441 ~~~~~~~-~~~~w~~~~~~~~  460 (473)
                      +++++.+ +.|+|+...++++
T Consensus       722 ~~a~~rV~~~FSW~~~A~~ll  742 (784)
T TIGR02470       722 QGGLQRIYEKYTWKIYSERLL  742 (784)
T ss_pred             HHHHHHHHHhCCHHHHHHHHH
Confidence            9998865 6899988777764

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.

>PRK14099 glycogen synthase; Provisional

Probab=100.00  E-value=4.8e-30  Score=273.49  Aligned_cols=290  Identities=16%  Similarity=0.185  Sum_probs=211.1

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHh--hCCCeEEEEecCchhhhh-hh----hcC-CCchH----HHHHH--HHHHHHhh
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASS--LRRSAFIVDWHNFGYTLL-SL----SLG-RRSHF----VSIYR--WIEKYYGK  165 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~--~~~~~~i~~~h~~~~~~~-~~----~~~-~~~~~----~~~~~--~~e~~~~~  165 (473)
                      .+||+||+|+   +.+..+..++..  ..++|+|+|+|+..+... ..    ..+ ....+    ...+.  .+.+...+
T Consensus       132 ~~pDIiH~Hd---w~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~  208 (485)
T PRK14099        132 FVPDIVHAHD---WQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ  208 (485)
T ss_pred             CCCCEEEECC---cHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence            5899999999   555544544443  246899999999853210 00    000 00000    00000  13566678


Q ss_pred             cCCEEEEcCHHHHHHHHHHh------------CCceEEeeCCC-CCCcccCChh----------------HHHHHHHhhh
Q 011979          166 MANGCLCVTQAMQHELAQNW------------GIKATVLYDQP-PEFFHPTSLE----------------EKHELFCRLN  216 (473)
Q Consensus       166 ~ad~vi~vS~~~~~~l~~~~------------g~~~~vi~n~~-~~~f~~~~~~----------------~~~~l~~~l~  216 (473)
                      .||.|+|+|+.+++++.+.+            ..++.+|+||. .+.|.|....                .+..++++++
T Consensus       209 ~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~g  288 (485)
T PRK14099        209 LADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFG  288 (485)
T ss_pred             hcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcC
Confidence            89999999999999987532            22489999994 4677765321                1234445544


Q ss_pred             hhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCC
Q 011979          217 KILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS  296 (473)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~  296 (473)
                      ..                                  ..++.+ +++++||+.++||++.|++|+..+.+           
T Consensus       289 l~----------------------------------~~~~~~-li~~VgRL~~~KG~d~Li~A~~~l~~-----------  322 (485)
T PRK14099        289 LD----------------------------------PDPDAL-LLGVISRLSWQKGLDLLLEALPTLLG-----------  322 (485)
T ss_pred             CC----------------------------------cccCCc-EEEEEecCCccccHHHHHHHHHHHHh-----------
Confidence            11                                  112233 88899999999999999999998865           


Q ss_pred             chhhHHHhhhccCccccCCCEEEEEEcCCCC--hHHHHHHHHHcCCCcE-EEecCCCCcccHHHHHh-cCcEEEEeccCC
Q 011979          297 TNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRV-AFRTMWLSAEDYPLLLG-SADLGVCLHTSS  372 (473)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~--~~~l~~~~~~~~l~~V-~~~g~~v~~~~i~~~l~-~adi~v~~~~~s  372 (473)
                                        .+++|+|+|+|+.  ++.+++++++++ .++ .++|+   .+++..+|. .||++|+   ||
T Consensus       323 ------------------~~~~lvivG~G~~~~~~~l~~l~~~~~-~~v~~~~G~---~~~l~~~~~a~aDifv~---PS  377 (485)
T PRK14099        323 ------------------EGAQLALLGSGDAELEARFRAAAQAYP-GQIGVVIGY---DEALAHLIQAGADALLV---PS  377 (485)
T ss_pred             ------------------cCcEEEEEecCCHHHHHHHHHHHHHCC-CCEEEEeCC---CHHHHHHHHhcCCEEEE---CC
Confidence                              3689999999863  567788877765 344 68887   789999874 7999999   78


Q ss_pred             CCCCCcHHHHHHHhcCCcEEEeccCccccceecC---------CceEEeC--CHHHHHHHHHH---HHhCCCCCHHHHHH
Q 011979          373 SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD---------KNGLLFS--SSSELADQLLM---LFKGFPDDSDVLKK  438 (473)
Q Consensus       373 ~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~---------~~G~~~~--~~~~la~~i~~---l~~~~~~~~~~~~~  438 (473)
                      ..|+||++++|||+||+|+|++++||+.|+|.++         .+|++++  |+++++++|.+   +++    |++.+++
T Consensus       378 ~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~----d~~~~~~  453 (485)
T PRK14099        378 RFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFA----DPVAWRR  453 (485)
T ss_pred             ccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhc----CHHHHHH
Confidence            8999999999999999988889999999999875         6899996  79999999997   454    5889999


Q ss_pred             HHHHHHHhccccchHHHHHHHHHHHHHHHhhc
Q 011979          439 LRNGTLEMGLSARWATEWEEHAKPLITEVISQ  470 (473)
Q Consensus       439 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~  470 (473)
                      |++++.+  +.|+|+...+++ .++++++..+
T Consensus       454 l~~~~~~--~~fSw~~~a~~y-~~lY~~l~~~  482 (485)
T PRK14099        454 LQRNGMT--TDVSWRNPAQHY-AALYRSLVAE  482 (485)
T ss_pred             HHHHhhh--hcCChHHHHHHH-HHHHHHHHhh
Confidence            9999874  589999998886 5566666543

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.1e-30  Score=254.70  Aligned_cols=327  Identities=20%  Similarity=0.245  Sum_probs=234.3

Q ss_pred             CCCChhHHH-HHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 011979           15 LGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW   93 (473)
Q Consensus        15 ~g~s~r~~~-~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (473)
                      .||..++.. .+..|.+. ||+|++++..... ........++.+..++....  ............+.+.+        
T Consensus        12 ~gG~~~~~~~l~~~L~~~-g~~v~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l--------   79 (348)
T cd03820          12 AGGAERVLSNLANALAEK-GHEVTIISLDKGE-PPFYELDPKIKVIDLGDKRD--SKLLARFKKLRRLRKLL--------   79 (348)
T ss_pred             CCChHHHHHHHHHHHHhC-CCeEEEEecCCCC-CCccccCCccceeecccccc--cchhccccchHHHHHhh--------
Confidence            466666554 55667665 9999999976554 12223345677766662111  10111111111111121        


Q ss_pred             HHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCC-CeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEE
Q 011979           94 FLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRR-SAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLC  172 (473)
Q Consensus        94 ~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~-~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~  172 (473)
                          +..+||+|+++.++ ..    ..+.....+ .|++++.|+...       .....  ......++.+.+.+|.+++
T Consensus        80 ----~~~~~d~i~~~~~~-~~----~~~~~~~~~~~~~i~~~~~~~~-------~~~~~--~~~~~~~~~~~~~~d~ii~  141 (348)
T cd03820          80 ----KNNKPDVVISFLTS-LL----TFLASLGLKIVKLIVSEHNSPD-------AYKKR--LRRLLLRRLLYRRADAVVV  141 (348)
T ss_pred             ----cccCCCEEEEcCch-HH----HHHHHHhhccccEEEecCCCcc-------chhhh--hHHHHHHHHHHhcCCEEEE
Confidence                23789999999965 11    222222334 499999998732       11111  1111247788889999999


Q ss_pred             cCHHHHHHHHHHhCCceEEeeCCCCC-CcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccccccc
Q 011979          173 VTQAMQHELAQNWGIKATVLYDQPPE-FFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV  251 (473)
Q Consensus       173 vS~~~~~~l~~~~g~~~~vi~n~~~~-~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (473)
                      +|+.++.......+.++.+++|+.+. .+.+.                                                
T Consensus       142 ~s~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~------------------------------------------------  173 (348)
T cd03820         142 LTEEDRALYYKKFNKNVVVIPNPLPFPPEEPS------------------------------------------------  173 (348)
T ss_pred             eCHHHHHHhhccCCCCeEEecCCcChhhcccc------------------------------------------------
Confidence            99999733333345558899988542 11110                                                


Q ss_pred             ccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHH
Q 011979          252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY  331 (473)
Q Consensus       252 ~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l  331 (473)
                        .+..+..++++|++.+.||++.++++++.+.+                           ..|+++|+|+|.|++.+.+
T Consensus       174 --~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~---------------------------~~~~~~l~i~G~~~~~~~~  224 (348)
T cd03820         174 --SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAK---------------------------KHPDWKLRIVGDGPEREAL  224 (348)
T ss_pred             --CCCCCcEEEEEEeeccccCHHHHHHHHHHHHh---------------------------cCCCeEEEEEeCCCCHHHH
Confidence              01123389999999999999999999999876                           3689999999999999989


Q ss_pred             HHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc-CccccceecCCce
Q 011979          332 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCIEELVKVDKNG  409 (473)
Q Consensus       332 ~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~-~~~~e~i~~~~~G  409 (473)
                      ++.++++++ ++|.+.|.   .+++..+|+.||++++   +|..|++|++++|||+||+|||+++. ++..+++.++.+|
T Consensus       225 ~~~~~~~~~~~~v~~~g~---~~~~~~~~~~ad~~i~---ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g  298 (348)
T cd03820         225 EALIKELGLEDRVILLGF---TKNIEEYYAKASIFVL---TSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNG  298 (348)
T ss_pred             HHHHHHcCCCCeEEEcCC---cchHHHHHHhCCEEEe---CccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcce
Confidence            999999998 78999987   8999999999999999   67779999999999999999999986 4566777777799


Q ss_pred             EEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHH
Q 011979          410 LLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEE  458 (473)
Q Consensus       410 ~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~  458 (473)
                      ++++  |+++++++|.+++++    ++.+++|++++++..++++|++..++
T Consensus       299 ~~~~~~~~~~~~~~i~~ll~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (348)
T cd03820         299 LLVPNGDVEALAEALLRLMED----EELRKRMGANARESAERFSIENIIKQ  345 (348)
T ss_pred             EEeCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence            9996  689999999999885    99999999999888888998876654

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.8e-30  Score=259.01  Aligned_cols=280  Identities=18%  Similarity=0.228  Sum_probs=212.4

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHH--HHHHHHHHHhhcCCEEEEcCHH
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVS--IYRWIEKYYGKMANGCLCVTQA  176 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~--~~~~~e~~~~~~ad~vi~vS~~  176 (473)
                      ..++|+|++++++...... +...++..++|++++.|+......    .....+.+  .....++...+.++.+++.|+.
T Consensus        85 ~~~~dii~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~  159 (375)
T cd03821          85 IREADIVHVHGLWSYPSLA-AARAARKYGIPYVVSPHGMLDPWA----LPHKALKKRLAWFLFERRLLQAAAAVHATSEQ  159 (375)
T ss_pred             CCCCCEEEEecccchHHHH-HHHHHHHhCCCEEEEccccccccc----cccchhhhHHHHHHHHHHHHhcCCEEEECCHH
Confidence            3789999999866555443 444445578999999998732111    01222221  1234466777789999999988


Q ss_pred             HHHHHHHHh-CCceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccC
Q 011979          177 MQHELAQNW-GIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK  254 (473)
Q Consensus       177 ~~~~l~~~~-g~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (473)
                      ....+.... ..++.+++|+.+ +.|.+.....  . +..++                                    .+
T Consensus       160 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~--~-~~~~~------------------------------------~~  200 (375)
T cd03821         160 EAAEIRRLGLKAPIAVIPNGVDIPPFAALPSRG--R-RRKFP------------------------------------IL  200 (375)
T ss_pred             HHHHHHhhCCcccEEEcCCCcChhccCcchhhh--h-hhhcc------------------------------------CC
Confidence            776665532 334889999844 4554432111  0 22111                                    22


Q ss_pred             CCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC--hHHHH
Q 011979          255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYE  332 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~--~~~l~  332 (473)
                      +++ ..++|+|++.+.||++.+++|+..+.+                           ..++++|+++|.++.  ...++
T Consensus       201 ~~~-~~i~~~G~~~~~K~~~~li~a~~~l~~---------------------------~~~~~~l~i~G~~~~~~~~~~~  252 (375)
T cd03821         201 PDK-RIILFLGRLHPKKGLDLLIEAFAKLAE---------------------------RFPDWHLVIAGPDEGGYRAELK  252 (375)
T ss_pred             CCC-cEEEEEeCcchhcCHHHHHHHHHHhhh---------------------------hcCCeEEEEECCCCcchHHHHH
Confidence            233 389999999999999999999999887                           368999999998753  34455


Q ss_pred             HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEE
Q 011979          333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL  411 (473)
Q Consensus       333 ~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~  411 (473)
                      ..++++++ ++|.|+|. ++.+++..+|+.||++++   +|..|++|++++|||+||+|||+++.++..+++.+ .+|++
T Consensus       253 ~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~adv~v~---ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~  327 (375)
T cd03821         253 QIAAALGLEDRVTFTGM-LYGEDKAAALADADLFVL---PSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWV  327 (375)
T ss_pred             HHHHhcCccceEEEcCC-CChHHHHHHHhhCCEEEe---ccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEE
Confidence            55688888 79999998 999999999999999999   67779999999999999999999999999999988 88999


Q ss_pred             eC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh-ccccchHHHHHHH
Q 011979          412 FS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM-GLSARWATEWEEH  459 (473)
Q Consensus       412 ~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~~~~~  459 (473)
                      ++ +.++++++|.+++++    ++.++++++++++. .++++|+...+++
T Consensus       328 ~~~~~~~~~~~i~~l~~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~~  373 (375)
T cd03821         328 VDDDVDALAAALRRALEL----PQRLKAMGENGRALVEERFSWTAIAQQL  373 (375)
T ss_pred             eCCChHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhcCHHHHHHHh
Confidence            87 579999999999995    78999999999998 5889988777664

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.

>PLN02939 transferase, transferring glycosyl groups

Probab=100.00  E-value=1.1e-29  Score=280.08  Aligned_cols=296  Identities=15%  Similarity=0.162  Sum_probs=214.4

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHh------hCCCeEEEEecCchhhhhh----hh-cC-CCchHH---H----HHHHH-
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASS------LRRSAFIVDWHNFGYTLLS----LS-LG-RRSHFV---S----IYRWI-  159 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~------~~~~~~i~~~h~~~~~~~~----~~-~~-~~~~~~---~----~~~~~-  159 (473)
                      .+||+||+|+   +.+.+++.++..      +.++|+|+++|++.|.-..    .. .+ +...+.   .    ++..+ 
T Consensus       609 ~~PDIIH~HD---W~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN  685 (977)
T PLN02939        609 KKPDIIHCHD---WQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRIN  685 (977)
T ss_pred             CCCCEEEECC---ccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchH
Confidence            5899999999   444433222111      3568999999999632100    00 00 000000   0    00001 


Q ss_pred             -HHHHhhcCCEEEEcCHHHHHHHHHHhC-----------CceEEeeCC-CCCCcccCCh----------------hHHHH
Q 011979          160 -EKYYGKMANGCLCVTQAMQHELAQNWG-----------IKATVLYDQ-PPEFFHPTSL----------------EEKHE  210 (473)
Q Consensus       160 -e~~~~~~ad~vi~vS~~~~~~l~~~~g-----------~~~~vi~n~-~~~~f~~~~~----------------~~~~~  210 (473)
                       -+....+||.|+|||+.+++++...+|           .++.+|+|| +.+.|.|...                ..+..
T Consensus       686 ~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~a  765 (977)
T PLN02939        686 VVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAA  765 (977)
T ss_pred             HHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHH
Confidence             122233699999999999999876433           136899999 4567776532                12444


Q ss_pred             HHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhh
Q 011979          211 LFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAI  290 (473)
Q Consensus       211 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~  290 (473)
                      ++.++|..                                 ...++.| +++++||+.++||++.+++|+..+.+     
T Consensus       766 LRkelGL~---------------------------------~~d~d~p-LIg~VGRL~~QKGiDlLleA~~~Ll~-----  806 (977)
T PLN02939        766 LRKQLGLS---------------------------------SADASQP-LVGCITRLVPQKGVHLIRHAIYKTAE-----  806 (977)
T ss_pred             HHHHhCCC---------------------------------cccccce-EEEEeecCCcccChHHHHHHHHHHhh-----
Confidence            55555411                                 0012344 89999999999999999999988754     


Q ss_pred             hccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh---HHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEE
Q 011979          291 LNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGV  366 (473)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~---~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v  366 (473)
                                              ++++|+|+|+|++.   +.+++++++++. ++|.|+|. .+......+|+.||++|
T Consensus       807 ------------------------~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~-~de~lah~IYAaADIFL  861 (977)
T PLN02939        807 ------------------------LGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILK-YDEALSHSIYAASDMFI  861 (977)
T ss_pred             ------------------------cCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEec-cCHHHHHHHHHhCCEEE
Confidence                                    46899999999763   678888899988 78999988 66666789999999999


Q ss_pred             EeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceec---------CCceEEeC--CHHHHHHHHHHHHhCCCCCHHH
Q 011979          367 CLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV---------DKNGLLFS--SSSELADQLLMLFKGFPDDSDV  435 (473)
Q Consensus       367 ~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~---------~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~  435 (473)
                      +   ||..|+||++++|||+||+|+|++++||+.++|.+         +.+|++++  |+++++++|.++++.+.++++.
T Consensus       862 m---PSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~  938 (977)
T PLN02939        862 I---PSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEV  938 (977)
T ss_pred             E---CCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHH
Confidence            9   78899999999999999999999999999999875         47899986  7999999999988744446899


Q ss_pred             HHHHHHHHHHhccccchHHHHHHHHHHHHHHHh
Q 011979          436 LKKLRNGTLEMGLSARWATEWEEHAKPLITEVI  468 (473)
Q Consensus       436 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~  468 (473)
                      +.+|++++..  ..|+|+...+++. ++|.++.
T Consensus       939 ~~~L~~~am~--~dFSWe~~A~qYe-eLY~~ll  968 (977)
T PLN02939        939 WKQLVQKDMN--IDFSWDSSASQYE-ELYQRAV  968 (977)
T ss_pred             HHHHHHHHHH--hcCCHHHHHHHHH-HHHHHHH
Confidence            9999988754  4799999988854 5565554

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=6.4e-30  Score=257.57  Aligned_cols=274  Identities=19%  Similarity=0.212  Sum_probs=203.7

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHH---HhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcC-H
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWA---SSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT-Q  175 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~---~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS-~  175 (473)
                      .+||+||++.............+   .+..++|+|++.|+..       .....   ....++++...+.+|.++++| +
T Consensus        75 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~-------~~~~~---~~~~~~~~~~~~~~d~ii~~s~~  144 (366)
T cd03822          75 SGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVL-------LHEPR---PGDRALLRLLLRRADAVIVMSSE  144 (366)
T ss_pred             cCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCC-------ccccc---hhhhHHHHHHHhcCCEEEEeeHH
Confidence            78999999763222111112222   2347899999999971       11111   122355677778999999995 5


Q ss_pred             HHHHHHHHHhCCceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccC
Q 011979          176 AMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK  254 (473)
Q Consensus       176 ~~~~~l~~~~g~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (473)
                      ..++.+...+..++.+++|+.+ ..+.+..  ..    ...                                    ...
T Consensus       145 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~----~~~------------------------------------~~~  182 (366)
T cd03822         145 LLRALLLRAYPEKIAVIPHGVPDPPAEPPE--SL----KAL------------------------------------GGL  182 (366)
T ss_pred             HHHHHHhhcCCCcEEEeCCCCcCcccCCch--hh----Hhh------------------------------------cCC
Confidence            5554444432356899999854 3332221  10    111                                    011


Q ss_pred             CCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHH--
Q 011979          255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE--  332 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~--  332 (473)
                      . .+..++|+|++.+.||++.+++|+..+.++                           .++++|+|+|+|.......  
T Consensus       183 ~-~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~~~  234 (366)
T cd03822         183 D-GRPVLLTFGLLRPYKGLELLLEALPLLVAK---------------------------HPDVRLLVAGETHPDLERYRG  234 (366)
T ss_pred             C-CCeEEEEEeeccCCCCHHHHHHHHHHHHhh---------------------------CCCeEEEEeccCccchhhhhh
Confidence            2 234899999999999999999999999873                           6899999999986543322  


Q ss_pred             ---HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCC--CCcHHHHHHHhcCCcEEEeccCccccceecC
Q 011979          333 ---EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGL--DLPMKVVDMFGCGLPVCAVSYSCIEELVKVD  406 (473)
Q Consensus       333 ---~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e--~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~  406 (473)
                         ++++++++ ++|.|+|+|++.+++..+|+.||++++   ||..|  ++|++++|||+||+|||+++.++ .+.+.++
T Consensus       235 ~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~---ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~  310 (366)
T cd03822         235 EAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVL---PYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDG  310 (366)
T ss_pred             hhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEe---cccccccccchHHHHHHHcCCCEEecCCCC-hheeeeC
Confidence               23788888 799999988999999999999999999   67777  99999999999999999999998 7777788


Q ss_pred             CceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHH
Q 011979          407 KNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAK  461 (473)
Q Consensus       407 ~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~  461 (473)
                      .+|++++  |+++++++|..++++    ++.+.+|++++++..++++|+...++..+
T Consensus       311 ~~g~~~~~~d~~~~~~~l~~l~~~----~~~~~~~~~~~~~~~~~~s~~~~~~~~~~  363 (366)
T cd03822         311 GTGLLVPPGDPAALAEAIRRLLAD----PELAQALRARAREYARAMSWERVAERYLR  363 (366)
T ss_pred             CCcEEEcCCCHHHHHHHHHHHHcC----hHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence            8999985  699999999999985    88899999999998877999877766443

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

Probab=100.00  E-value=2.2e-30  Score=266.52  Aligned_cols=274  Identities=14%  Similarity=0.151  Sum_probs=202.9

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      ..+||+||+|++..  ..  ...+.+..++|+|+++|....       ...   ....+++ +...+.+|.+++.|+.  
T Consensus        83 ~~~~Dvv~~h~~~~--~~--~~~~~~~~~~~~i~~~H~~~~-------~~~---~~~~~~~-~~~~~~~d~~i~~~~~--  145 (372)
T cd03792          83 DLDADVVVIHDPQP--LA--LPLFKKKRGRPWIWRCHIDLS-------SPN---RRVWDFL-QPYIEDYDAAVFHLPE--  145 (372)
T ss_pred             cCCCCEEEECCCCc--hh--HHHhhhcCCCeEEEEeeeecC-------CCc---HHHHHHH-HHHHHhCCEEeecHHH--
Confidence            36899999998752  12  222233347899999997631       111   1222233 4455678988888732  


Q ss_pred             HHHHHHhCCceEEeeCCCC-CC-cc-cCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCC
Q 011979          179 HELAQNWGIKATVLYDQPP-EF-FH-PTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP  255 (473)
Q Consensus       179 ~~l~~~~g~~~~vi~n~~~-~~-f~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (473)
                       ++....+.+..++||+.+ .. +. +.+.+....++.+++                                    +++
T Consensus       146 -~~~~~~~~~~~vipngvd~~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~  188 (372)
T cd03792         146 -YVPPQVPPRKVIIPPSIDPLSGKNRELSPADIEYILEKYG------------------------------------IDP  188 (372)
T ss_pred             -hcCCCCCCceEEeCCCCCCCccccCCCCHHHHHHHHHHhC------------------------------------CCC
Confidence             233322333448999844 21 21 223334444555544                                    233


Q ss_pred             CCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh-----HH
Q 011979          256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-----ES  330 (473)
Q Consensus       256 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-----~~  330 (473)
                      +++ +++++||+.+.||++.+++|+..+.++                           .|+++|+|+|+|+..     +.
T Consensus       189 ~~~-~i~~vgrl~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~l~i~G~g~~~~~~~~~~  240 (372)
T cd03792         189 ERP-YITQVSRFDPWKDPFGVIDAYRKVKER---------------------------VPDPQLVLVGSGATDDPEGWIV  240 (372)
T ss_pred             CCc-EEEEEeccccccCcHHHHHHHHHHHhh---------------------------CCCCEEEEEeCCCCCCchhHHH
Confidence            444 899999999999999999999998762                           578999999999642     23


Q ss_pred             HHHHHHHcCC-CcEEEecCC-CCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCc
Q 011979          331 YEEKIRRLRL-KRVAFRTMW-LSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKN  408 (473)
Q Consensus       331 l~~~~~~~~l-~~V~~~g~~-v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~  408 (473)
                      ++++.+..++ ++|.|+|.. ++.+++..+|+.||++++   +|..|+||++++||||||+|||+++.++..+++.++.+
T Consensus       241 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~---~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~  317 (372)
T cd03792         241 YEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQ---KSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGET  317 (372)
T ss_pred             HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEe---CCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCc
Confidence            4555556666 789999872 278999999999999999   78899999999999999999999999999999999999


Q ss_pred             eEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHHH
Q 011979          409 GLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAK  461 (473)
Q Consensus       409 G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~  461 (473)
                      |+++++.++++++|.+++++    ++.+++|++++++.. ++|+|+...+++++
T Consensus       318 g~~~~~~~~~a~~i~~ll~~----~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~  367 (372)
T cd03792         318 GFLVDTVEEAAVRILYLLRD----PELRRKMGANAREHVRENFLITRHLKDYLY  367 (372)
T ss_pred             eEEeCCcHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            99999999999999999985    888999999999976 68999887777553

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.

>PLN02846 digalactosyldiacylglycerol synthase

Probab=100.00  E-value=1.2e-29  Score=265.96  Aligned_cols=354  Identities=12%  Similarity=0.100  Sum_probs=227.4

Q ss_pred             CCCCCeEEEEEecCC---CC-ChhHHHHHHHHHhhCC-CcEEEEecCCCCCCc--------------c----cccCCCEE
Q 011979            1 MGRRGRACVVVLGDL---GR-SPRMQYQALSLARQMS-LEVDVVAYGGSKPHA--------------A----ILEHPSIH   57 (473)
Q Consensus         1 m~~~~~~~i~~~~~~---g~-s~r~~~~a~~L~~~~g-~eV~vi~~~~~~~~~--------------~----~~~~~~i~   57 (473)
                      |.+.+++.|+....+   +| +--....+..|+++ | |+|+|+++......+              +    +.+..+-.
T Consensus         1 ~~~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~-G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~   79 (462)
T PLN02846          1 MQKKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKD-GDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEER   79 (462)
T ss_pred             CCCCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhc-CCcEEEEEecCCccccccccccccccccCchhhhhhhhhhccCe
Confidence            555566777776543   33 35556677888887 9 799999975421100              0    00011234


Q ss_pred             EEEeecCCCCCCCC-----cchhHHHHHHHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEE
Q 011979           58 IHTMTQWPTIPRGL-----PKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV  132 (473)
Q Consensus        58 i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~  132 (473)
                      +.+++..+.+.+.-     .+.......+.+.+            +..+||+||+++|..+...-.+...+...++ +|.
T Consensus        80 v~r~~s~~~p~yp~r~~~~~r~~~~~~~i~~~l------------~~~~pDVIHv~tP~~LG~~~~g~~~~~k~~~-vV~  146 (462)
T PLN02846         80 ISFLPKFSIKFYPGKFSTDKRSILPVGDISETI------------PDEEADIAVLEEPEHLTWYHHGKRWKTKFRL-VIG  146 (462)
T ss_pred             EEEecccccccCcccccccccccCChHHHHHHH------------HhcCCCEEEEcCchhhhhHHHHHHHHhcCCc-EEE
Confidence            55665433322211     01000111122222            2378999999998654432113333333344 777


Q ss_pred             EecCchhhhhhhhcCCCchH-HHHHHHHHHHHhh-cCCEEEEcCHHHHHHHHHHhCCceEEeeCC-CCCCcccCChhHHH
Q 011979          133 DWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGK-MANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKH  209 (473)
Q Consensus       133 ~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~-~ad~vi~vS~~~~~~l~~~~g~~~~vi~n~-~~~~f~~~~~~~~~  209 (473)
                      ++|.....+.. .. ..... ..+.+.+.+++.+ .+|.+++.|..+++ +.+.    .....+| +.++|++....   
T Consensus       147 tyHT~y~~Y~~-~~-~~g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l~~~----~i~~v~GVd~~~f~~~~~~---  216 (462)
T PLN02846        147 IVHTNYLEYVK-RE-KNGRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-YPRS----IICNVHGVNPKFLEIGKLK---  216 (462)
T ss_pred             EECCChHHHHH-Hh-ccchHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-HhhC----EEecCceechhhcCCCccc---
Confidence            89985222211 11 11111 2233344444433 38999999997776 4331    2223456 44666654211   


Q ss_pred             HHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCC-CeEEEEEeeccCCCCHHHHHHHHHHhHHHHH
Q 011979          210 ELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR-PALVVSSTSWTPDEDFGILLEAALMYDRRVA  288 (473)
Q Consensus       210 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~  288 (473)
                       .....                                     ...+. ...++|+||+..+||++.||+|+..+.+.  
T Consensus       217 -~~~~~-------------------------------------~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~--  256 (462)
T PLN02846        217 -LEQQK-------------------------------------NGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKE--  256 (462)
T ss_pred             -Hhhhc-------------------------------------CCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhh--
Confidence             11100                                     01111 12689999999999999999999998762  


Q ss_pred             hhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEe
Q 011979          289 AILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCL  368 (473)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~  368 (473)
                                               .|+++|+|+|+||+++++++++++++++...|.|.    .+..+++..+|++|+ 
T Consensus       257 -------------------------~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~----~~~~~~~~~~DvFv~-  306 (462)
T PLN02846        257 -------------------------LSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGR----DHADPLFHDYKVFLN-  306 (462)
T ss_pred             -------------------------CCCeEEEEECCCccHHHHHHHHHhcCCcEEEECCC----CCHHHHHHhCCEEEE-
Confidence                                     57899999999999999999999999853336654    445579999999999 


Q ss_pred             ccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcc
Q 011979          369 HTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGL  448 (473)
Q Consensus       369 ~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~  448 (473)
                        +|..|++|++++||||||+|||+++.++ .+++.++.+|+.++|.+++++++..++.+   ++   +.++..+++   
T Consensus       307 --pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~~~~~~a~ai~~~l~~---~~---~~~~~~a~~---  374 (462)
T PLN02846        307 --PSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYDDGKGFVRATLKALAE---EP---APLTDAQRH---  374 (462)
T ss_pred             --CCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecCCHHHHHHHHHHHHcc---Cc---hhHHHHHHH---
Confidence              7999999999999999999999999887 59999999999999999999999999985   23   233344443   


Q ss_pred             ccchHHHHHHHH
Q 011979          449 SARWATEWEEHA  460 (473)
Q Consensus       449 ~~~w~~~~~~~~  460 (473)
                      .++|+...++.+
T Consensus       375 ~~SWe~~~~~l~  386 (462)
T PLN02846        375 ELSWEAATERFL  386 (462)
T ss_pred             hCCHHHHHHHHH
Confidence            788888777754

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.98  E-value=1.2e-29  Score=269.38  Aligned_cols=288  Identities=18%  Similarity=0.148  Sum_probs=210.4

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhh------CCCeEEEEecCchhhhh----hhh-cCCC--chHH------HHHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSL------RRSAFIVDWHNFGYTLL----SLS-LGRR--SHFV------SIYRWIE  160 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~------~~~~~i~~~h~~~~~~~----~~~-~~~~--~~~~------~~~~~~e  160 (473)
                      .+||+||+|+.   .+..+..+++..      .++|+|+++|+..+.-.    ... ....  ....      .....++
T Consensus       128 ~~pDviH~hd~---~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (476)
T cd03791         128 WKPDIIHCHDW---HTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFL  204 (476)
T ss_pred             CCCcEEEECch---HHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHH
Confidence            68999999994   444444444443      48999999999853110    000 0000  0000      0011456


Q ss_pred             HHHhhcCCEEEEcCHHHHHHHHHH------------hCCceEEeeCCC-CCCcccCChh----------------HHHHH
Q 011979          161 KYYGKMANGCLCVTQAMQHELAQN------------WGIKATVLYDQP-PEFFHPTSLE----------------EKHEL  211 (473)
Q Consensus       161 ~~~~~~ad~vi~vS~~~~~~l~~~------------~g~~~~vi~n~~-~~~f~~~~~~----------------~~~~l  211 (473)
                      +...+.||.++++|+.+++.+.+.            ...++.+|+||. .+.|.|....                .+..+
T Consensus       205 ~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l  284 (476)
T cd03791         205 KAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAAL  284 (476)
T ss_pred             HHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHH
Confidence            777889999999999999887531            124589999994 4667654221                23344


Q ss_pred             HHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhh
Q 011979          212 FCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAIL  291 (473)
Q Consensus       212 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~  291 (473)
                      +++++.                                  ...++.+ +++|+||+.+.||++.+++|+..+.+      
T Consensus       285 ~~~~g~----------------------------------~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~------  323 (476)
T cd03791         285 QEELGL----------------------------------PVDPDAP-LFGFVGRLTEQKGIDLLLEALPELLE------  323 (476)
T ss_pred             HHHcCC----------------------------------CcCCCCC-EEEEEeeccccccHHHHHHHHHHHHH------
Confidence            444441                                  1123445 89999999999999999999999876      


Q ss_pred             ccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC--hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEec
Q 011979          292 NEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLH  369 (473)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~--~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~  369 (473)
                                             .+++|+|+|+|+.  .+.++++++++ .+++.+.+. .+.+++..+|+.||++++  
T Consensus       324 -----------------------~~~~lvi~G~g~~~~~~~~~~~~~~~-~~~v~~~~~-~~~~~~~~~~~~aDv~l~--  376 (476)
T cd03791         324 -----------------------LGGQLVILGSGDPEYEEALRELAARY-PGRVAVLIG-YDEALAHLIYAGADFFLM--  376 (476)
T ss_pred             -----------------------cCcEEEEEecCCHHHHHHHHHHHHhC-CCcEEEEEe-CCHHHHHHHHHhCCEEEC--
Confidence                                   2499999999864  35566666665 368888777 567788899999999999  


Q ss_pred             cCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCC------ceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 011979          370 TSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK------NGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRN  441 (473)
Q Consensus       370 ~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~------~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~  441 (473)
                       ||..|+||++++|||+||+|||+++.+|+.|++.++.      +|++++  |+++++++|.++++... +++.+.++++
T Consensus       377 -pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~-~~~~~~~~~~  454 (476)
T cd03791         377 -PSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYR-DPEAWRKLQR  454 (476)
T ss_pred             -CCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHc-CHHHHHHHHH
Confidence             7888999999999999999999999999999999987      999996  69999999999886422 4788888888


Q ss_pred             HHHHhccccchHHHHHHHHHH
Q 011979          442 GTLEMGLSARWATEWEEHAKP  462 (473)
Q Consensus       442 ~~~~~~~~~~w~~~~~~~~~~  462 (473)
                      ++.+  ..++|+...+++.+.
T Consensus       455 ~~~~--~~fsw~~~a~~~~~~  473 (476)
T cd03791         455 NAMA--QDFSWDRSAKEYLEL  473 (476)
T ss_pred             HHhc--cCCChHHHHHHHHHH
Confidence            8876  369998888776543

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.

>PRK14098 glycogen synthase; Provisional

Probab=99.98  E-value=2.7e-29  Score=267.94  Aligned_cols=292  Identities=14%  Similarity=0.157  Sum_probs=215.1

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhh-------CCCeEEEEecCchhhh------hhhhcCCCchHHHHH-----HHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSL-------RRSAFIVDWHNFGYTL------LSLSLGRRSHFVSIY-----RWIEK  161 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~-------~~~~~i~~~h~~~~~~------~~~~~~~~~~~~~~~-----~~~e~  161 (473)
                      .+||+||+|+   +.+..+..+++..       .++|+|+++|+..+.-      ..... +........     ..+.+
T Consensus       140 ~~pDiiH~hd---w~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~-~~~~~~~~~~~~~~~n~lk  215 (489)
T PRK14098        140 WKPDIIHCHD---WYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL-PEEVCSGLHREGDEVNMLY  215 (489)
T ss_pred             CCCCEEEecC---cHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC-CHHhhhhhhhcCCcccHHH
Confidence            4799999999   5555455555432       3799999999974310      00000 000000000     12345


Q ss_pred             HHhhcCCEEEEcCHHHHHHHHHH----hC---------CceEEeeCC-CCCCcccCChh----------------HHHHH
Q 011979          162 YYGKMANGCLCVTQAMQHELAQN----WG---------IKATVLYDQ-PPEFFHPTSLE----------------EKHEL  211 (473)
Q Consensus       162 ~~~~~ad~vi~vS~~~~~~l~~~----~g---------~~~~vi~n~-~~~~f~~~~~~----------------~~~~l  211 (473)
                      ...+.||.|+|+|+.+++++.+.    +|         .++.+|+|| +.+.|.|....                .+..+
T Consensus       216 ~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l  295 (489)
T PRK14098        216 TGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKAL  295 (489)
T ss_pred             HHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHH
Confidence            55678999999999999988752    22         348899999 45677765321                13334


Q ss_pred             HHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhh
Q 011979          212 FCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAIL  291 (473)
Q Consensus       212 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~  291 (473)
                      +.+++.                                  ...++.| +++++||+.+.||++.|++|+..+.+      
T Consensus       296 ~~~lgl----------------------------------~~~~~~~-~i~~vgRl~~~KG~d~li~a~~~l~~------  334 (489)
T PRK14098        296 LEEVGL----------------------------------PFDEETP-LVGVIINFDDFQGAELLAESLEKLVE------  334 (489)
T ss_pred             HHHhCC----------------------------------CCccCCC-EEEEeccccccCcHHHHHHHHHHHHh------
Confidence            444431                                  1123344 89999999999999999999999865      


Q ss_pred             ccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC--hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEec
Q 011979          292 NEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLH  369 (473)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~--~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~  369 (473)
                                             ++++|+|+|+|+.  .+.+++++++++ ++|.|.|. ++.+++..+|+.||++++  
T Consensus       335 -----------------------~~~~lvivG~G~~~~~~~l~~l~~~~~-~~V~~~g~-~~~~~~~~~~a~aDi~l~--  387 (489)
T PRK14098        335 -----------------------LDIQLVICGSGDKEYEKRFQDFAEEHP-EQVSVQTE-FTDAFFHLAIAGLDMLLM--  387 (489)
T ss_pred             -----------------------cCcEEEEEeCCCHHHHHHHHHHHHHCC-CCEEEEEe-cCHHHHHHHHHhCCEEEe--
Confidence                                   4799999999974  467888888875 68999998 899999999999999999  


Q ss_pred             cCCCCCCCcHHHHHHHhcCCcEEEeccCccccceec----CCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 011979          370 TSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV----DKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGT  443 (473)
Q Consensus       370 ~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~----~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~  443 (473)
                       ||..|+||++.+|||+||+|+|+++.||+.|.+.+    +.+|++++  |+++++++|.++++.+ ++++.+.++++++
T Consensus       388 -PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~-~~~~~~~~~~~~~  465 (489)
T PRK14098        388 -PGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALY-HDEERWEELVLEA  465 (489)
T ss_pred             -CCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHH-cCHHHHHHHHHHH
Confidence             78899999999999999999999999999988864    67999996  7999999999876422 2578888888777


Q ss_pred             HHhccccchHHHHHHHHHHHHHHHh
Q 011979          444 LEMGLSARWATEWEEHAKPLITEVI  468 (473)
Q Consensus       444 ~~~~~~~~w~~~~~~~~~~~~~~~~  468 (473)
                      .+  +.++|+...+++ .+++++++
T Consensus       466 ~~--~~fsw~~~a~~y-~~lY~~~~  487 (489)
T PRK14098        466 ME--RDFSWKNSAEEY-AQLYRELL  487 (489)
T ss_pred             hc--CCCChHHHHHHH-HHHHHHHh
Confidence            53  589999998886 55666554

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.98  E-value=3.9e-30  Score=273.90  Aligned_cols=275  Identities=16%  Similarity=0.199  Sum_probs=216.7

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhc--C------CCchHHHHHHHHHHHHhhcCCEE
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSL--G------RRSHFVSIYRWIEKYYGKMANGC  170 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~--~------~~~~~~~~~~~~e~~~~~~ad~v  170 (473)
                      ..++|++|+|+++.  ...++.++++..++|+|++.|+..........  .      .+..+.++++.+++.+++.||.+
T Consensus       171 ~~~~dviH~~s~~~--~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~I  248 (475)
T cd03813         171 LPKADVYHAVSTGY--AGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRI  248 (475)
T ss_pred             CCCCCEEeccCcch--HHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence            46899999998542  33346677778899999999997321100000  0      01222355677888899999999


Q ss_pred             EEcCHHHHHHHHHHhCCc---eEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcc
Q 011979          171 LCVTQAMQHELAQNWGIK---ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL  246 (473)
Q Consensus       171 i~vS~~~~~~l~~~~g~~---~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (473)
                      +++|+..++.+.+ +|.+   +.+||||.+ +.|.+....                                        
T Consensus       249 i~~s~~~~~~~~~-~g~~~~ki~vIpNgid~~~f~~~~~~----------------------------------------  287 (475)
T cd03813         249 TTLYEGNRERQIE-DGADPEKIRVIPNGIDPERFAPARRA----------------------------------------  287 (475)
T ss_pred             EecCHHHHHHHHH-cCCCHHHeEEeCCCcCHHHcCCcccc----------------------------------------
Confidence            9999999987665 5653   789999954 455443110                                        


Q ss_pred             cccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCC
Q 011979          247 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP  326 (473)
Q Consensus       247 ~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~  326 (473)
                           ...+ .+..++|+||+.+.||++.+++|++.+.++                           .|+++++|+|+|+
T Consensus       288 -----~~~~-~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~---------------------------~p~~~l~IvG~g~  334 (475)
T cd03813         288 -----RPEK-EPPVVGLIGRVVPIKDIKTFIRAAAIVRKK---------------------------IPDAEGWVIGPTD  334 (475)
T ss_pred             -----ccCC-CCcEEEEEeccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEECCCC
Confidence                 0112 233899999999999999999999999873                           6899999999985


Q ss_pred             C----hHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCcccc
Q 011979          327 D----KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE  401 (473)
Q Consensus       327 ~----~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e  401 (473)
                      .    .++++++++++++ ++|.|+|    .+++.++|+.+|++|+   +|..|++|++++||||||+|||+|+.++..|
T Consensus       335 ~~~~~~~e~~~li~~l~l~~~V~f~G----~~~v~~~l~~aDv~vl---pS~~Eg~p~~vlEAma~G~PVVatd~g~~~e  407 (475)
T cd03813         335 EDPEYAEECRELVESLGLEDNVKFTG----FQNVKEYLPKLDVLVL---TSISEGQPLVILEAMAAGIPVVATDVGSCRE  407 (475)
T ss_pred             cChHHHHHHHHHHHHhCCCCeEEEcC----CccHHHHHHhCCEEEe---CchhhcCChHHHHHHHcCCCEEECCCCChHH
Confidence            3    3556788899999 8999998    4899999999999999   6888999999999999999999999999999


Q ss_pred             ceec------CCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHH
Q 011979          402 LVKV------DKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHA  460 (473)
Q Consensus       402 ~i~~------~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~  460 (473)
                      ++.+      +.+|++++  |+++++++|.+++++    ++.+++|++++++.. +.++|++..+++.
T Consensus       408 lv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~----~~~~~~~~~~a~~~v~~~~s~~~~~~~y~  471 (475)
T cd03813         408 LIEGADDEALGPAGEVVPPADPEALARAILRLLKD----PELRRAMGEAGRKRVERYYTLERMIDSYR  471 (475)
T ss_pred             HhcCCcccccCCceEEECCCCHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            9988      56999986  799999999999985    899999999999877 5578887776644

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>PLN02316 synthase/transferase

Probab=99.98  E-value=7e-29  Score=277.90  Aligned_cols=275  Identities=16%  Similarity=0.142  Sum_probs=205.7

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHh------hCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEc
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASS------LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV  173 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~------~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v  173 (473)
                      .+||+||+|.   +++..++.+++.      +.++|+|+++|+..+       .. +        ..+.....||.|+|+
T Consensus       708 ~~PDIIHaHD---W~talva~llk~~~~~~~~~~~p~V~TiHnl~~-------~~-n--------~lk~~l~~AD~ViTV  768 (1036)
T PLN02316        708 FHPDIIHCHD---WSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF-------GA-N--------HIGKAMAYADKATTV  768 (1036)
T ss_pred             CCCCEEEECC---ChHHHHHHHHHHhhhhhccCCCCEEEEeCCccc-------ch-h--------HHHHHHHHCCEEEeC
Confidence            5899999999   444444555543      246899999998742       11 1        112345689999999


Q ss_pred             CHHHHHHHHHHhC-----CceEEeeCC-CCCCcccCCh-----------------hHHHHHHHhhhhhccCCCCcccccC
Q 011979          174 TQAMQHELAQNWG-----IKATVLYDQ-PPEFFHPTSL-----------------EEKHELFCRLNKILHQPLGVQDCVS  230 (473)
Q Consensus       174 S~~~~~~l~~~~g-----~~~~vi~n~-~~~~f~~~~~-----------------~~~~~l~~~l~~~~~~~~~~~~~~~  230 (473)
                      |+.+++.+.....     .++.+|+|| +.+.|.|...                 ..+..++.+++              
T Consensus       769 S~tya~EI~~~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lG--------------  834 (1036)
T PLN02316        769 SPTYSREVSGNSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLG--------------  834 (1036)
T ss_pred             CHHHHHHHHhccCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhC--------------
Confidence            9999999876533     248999999 4456655421                 11334455554              


Q ss_pred             CCcCCCCccchhhhcccccccccC-CCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccC
Q 011979          231 NGMEGQKADETIFTSLAGIDVFLK-PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDG  309 (473)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (473)
                                            ++ ++.| +++++||+.++||++.|++|+..+.+                        
T Consensus       835 ----------------------L~~~d~p-lVg~VGRL~~qKGvdlLi~Al~~ll~------------------------  867 (1036)
T PLN02316        835 ----------------------LKQADLP-LVGIITRLTHQKGIHLIKHAIWRTLE------------------------  867 (1036)
T ss_pred             ----------------------CCcccCe-EEEEEeccccccCHHHHHHHHHHHhh------------------------
Confidence                                  22 2344 89999999999999999999998755                        


Q ss_pred             ccccCCCEEEEEEcCCCC---hHHHHHHHHHcCC---CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHH
Q 011979          310 KQYLYPRLLFIITGKGPD---KESYEEKIRRLRL---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVD  383 (473)
Q Consensus       310 ~~~~~~~~~l~ivG~g~~---~~~l~~~~~~~~l---~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~E  383 (473)
                           ++++|+|+|+||+   .+.++++++++++   ++|.|.|. .+......+|+.||++|+   ||..|+||++++|
T Consensus       868 -----~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~-~de~lah~iyaaADiflm---PS~~EP~GLvqLE  938 (1036)
T PLN02316        868 -----RNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLT-YDEPLSHLIYAGADFILV---PSIFEPCGLTQLT  938 (1036)
T ss_pred             -----cCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEec-CCHHHHHHHHHhCcEEEe---CCcccCccHHHHH
Confidence                 4689999999976   3678888998865   58999887 433333589999999999   7999999999999


Q ss_pred             HHhcCCcEEEeccCccccceecC-------------CceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-
Q 011979          384 MFGCGLPVCAVSYSCIEELVKVD-------------KNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-  447 (473)
Q Consensus       384 ama~G~PvI~~~~~~~~e~i~~~-------------~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-  447 (473)
                      ||+||+|+|++++||++++|.++             .+|++++  |+++++.+|.+++..+.   +....+++.+++.. 
T Consensus       939 AMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~---~~~~~~~~~~r~~m~ 1015 (1036)
T PLN02316        939 AMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWY---DGRDWFNSLCKRVME 1015 (1036)
T ss_pred             HHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHHH
Confidence            99999999999999999999874             6899997  69999999999998633   33344455554432 


Q ss_pred             cccchHHHHHHHHHHHHHHH
Q 011979          448 LSARWATEWEEHAKPLITEV  467 (473)
Q Consensus       448 ~~~~w~~~~~~~~~~~~~~~  467 (473)
                      +.|+|+...+++. .+|.++
T Consensus      1016 ~dFSW~~~A~~Y~-~LY~~a 1034 (1036)
T PLN02316       1016 QDWSWNRPALDYM-ELYHSA 1034 (1036)
T ss_pred             hhCCHHHHHHHHH-HHHHHH
Confidence            4799999988864 555554

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.98  E-value=1.5e-29  Score=254.86  Aligned_cols=273  Identities=21%  Similarity=0.245  Sum_probs=211.3

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH  179 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~  179 (473)
                      .++|+||++++.....        +..++|+++++|+..+.....  .........++..++.+.+.+|.++++|+.+++
T Consensus        84 ~~~Dii~~~~~~~~~~--------~~~~~~~i~~~hd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~  153 (365)
T cd03809          84 LGLDLLHSPHNTAPLL--------RLRGVPVVVTIHDLIPLRFPE--YFSPGFRRYFRRLLRRALRRADAIITVSEATKR  153 (365)
T ss_pred             cCCCeeeecccccCcc--------cCCCCCEEEEeccchhhhCcc--cCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHH
Confidence            7899999998543322        567899999999985322211  111122455677888888999999999999999


Q ss_pred             HHHHHhCC---ceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCC
Q 011979          180 ELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP  255 (473)
Q Consensus       180 ~l~~~~g~---~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (473)
                      .+.+.++.   ++.+++|+.+ ..+.+...+.    +....                                    ..+
T Consensus       154 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~----~~~~~------------------------------------~~~  193 (365)
T cd03809         154 DLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAE----VLRAL------------------------------------YLL  193 (365)
T ss_pred             HHHHHhCcCHHHEEeeccccCccccCCCchHH----HHHHh------------------------------------cCC
Confidence            99988773   3889999854 4443332111    11111                                    122


Q ss_pred             CCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC-hHHHHHH
Q 011979          256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYEEK  334 (473)
Q Consensus       256 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~-~~~l~~~  334 (473)
                      ++ ..++|+|++.+.||++.+++++..+.+.                           .++++|+++|.++. .....+.
T Consensus       194 ~~-~~i~~~G~~~~~K~~~~~l~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~~~~  245 (365)
T cd03809         194 PR-PYFLYVGTIEPRKNLERLLEAFARLPAK---------------------------GPDPKLVIVGKRGWLNEELLAR  245 (365)
T ss_pred             CC-CeEEEeCCCccccCHHHHHHHHHHHHHh---------------------------cCCCCEEEecCCccccHHHHHH
Confidence            23 3899999999999999999999999873                           55799999998754 3334444


Q ss_pred             HHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC
Q 011979          335 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS  413 (473)
Q Consensus       335 ~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~  413 (473)
                      +++++. ++|.++|. ++.+++..+++.||++++   ||..|++|++++|||++|+|||+++.+++.|++.+  +|++++
T Consensus       246 ~~~~~~~~~v~~~g~-~~~~~~~~~~~~~d~~l~---ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~--~~~~~~  319 (365)
T cd03809         246 LRELGLGDRVRFLGY-VSDEELAALYRGARAFVF---PSLYEGFGLPVLEAMACGTPVIASNISSLPEVAGD--AALYFD  319 (365)
T ss_pred             HHHcCCCCeEEECCC-CChhHHHHHHhhhhhhcc---cchhccCCCCHHHHhcCCCcEEecCCCCccceecC--ceeeeC
Confidence            456777 79999998 999999999999999999   67778999999999999999999999999998854  566664


Q ss_pred             --CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHH
Q 011979          414 --SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHA  460 (473)
Q Consensus       414 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~  460 (473)
                        |.++++++|.+++++    ++.+.++++++++..++++|+...++++
T Consensus       320 ~~~~~~~~~~i~~l~~~----~~~~~~~~~~~~~~~~~~sw~~~~~~~~  364 (365)
T cd03809         320 PLDPEALAAAIERLLED----PALREELRERGLARAKRFSWEKTARRTL  364 (365)
T ss_pred             CCCHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence              799999999999884    9999999999998788999988887654

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.

>PLN00142 sucrose synthase

Probab=99.97  E-value=1.7e-29  Score=277.27  Aligned_cols=374  Identities=14%  Similarity=0.110  Sum_probs=240.9

Q ss_pred             HHHHhhCCCcE----EEEecCCCCC-----C---cccccCCCEEEEEeecCCCCC-CCCcchh-H--HHHHHHHHHHHHH
Q 011979           26 LSLARQMSLEV----DVVAYGGSKP-----H---AAILEHPSIHIHTMTQWPTIP-RGLPKVL-K--PVLLLLKPLIQFF   89 (473)
Q Consensus        26 ~~L~~~~g~eV----~vi~~~~~~~-----~---~~~~~~~~i~i~~~~~~~~~~-~~~~~~~-~--~~~~~~~~~~~~~   89 (473)
                      ..|+++ ||+|    +|+|......     .   +.+...+++++.++|  ..+. ..++++. +  .+.++..+...  
T Consensus       322 ~~l~~~-G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP--~g~~~~~l~~~i~ke~l~p~L~~f~~~--  396 (815)
T PLN00142        322 LRIKQQ-GLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVP--FRTEKGILRKWISRFDVWPYLETFAED--  396 (815)
T ss_pred             HHHHhc-CCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecC--CCCCccccccccCHHHHHHHHHHHHHH--
Confidence            455565 9977    4988543211     1   122334589999998  3332 1122211 1  11222222211  


Q ss_pred             HHHHHHhh-hhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhh-c--CCCchHHHHH--HHHHHHH
Q 011979           90 MLLWFLCV-KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLS-L--GRRSHFVSIY--RWIEKYY  163 (473)
Q Consensus        90 ~~~~~~~~-~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~-~--~~~~~~~~~~--~~~e~~~  163 (473)
                       +...+.. ....||+||.|.   +.+..++..++...++|++.+.|.++-...... .  ........+.  ...|..+
T Consensus       397 -~~~~~~~~~~~~PDlIHaHY---wdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a  472 (815)
T PLN00142        397 -AASEILAELQGKPDLIIGNY---SDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIA  472 (815)
T ss_pred             -HHHHHHHhcCCCCCEEEECC---ccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHH
Confidence             1111111 124699999997   777778999999999999999998752221100 0  0001111111  2357888


Q ss_pred             hhcCCEEEEcCHHHHHHH-------HHH------------hCC-----ceEEeeCC-CCCCcccCChhHHHHHHHhhhhh
Q 011979          164 GKMANGCLCVTQAMQHEL-------AQN------------WGI-----KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKI  218 (473)
Q Consensus       164 ~~~ad~vi~vS~~~~~~l-------~~~------------~g~-----~~~vi~n~-~~~~f~~~~~~~~~~l~~~l~~~  218 (473)
                      ...||.||+.|...+..+       ...            .|+     ++.++++| +...|.|.....+ .+ ..+.  
T Consensus       473 ~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~-rl-~~l~--  548 (815)
T PLN00142        473 MNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQK-RL-TSLH--  548 (815)
T ss_pred             HHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHh-hH-Hhhc--
Confidence            889999999998776422       111            122     46889988 4465666542211 11 0110  


Q ss_pred             ccCCCCcccccCCCcCCCCccchhhhcc-cccccc--cCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCC
Q 011979          219 LHQPLGVQDCVSNGMEGQKADETIFTSL-AGIDVF--LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD  295 (473)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~  295 (473)
                                  ++++     ...|... ......  ..+++| +++++||+.+.||++.||+|+..+.+          
T Consensus       549 ------------n~I~-----~~l~~~~~~~e~lg~l~~~~kp-vIl~VGRL~~~KGid~LIeA~a~l~~----------  600 (815)
T PLN00142        549 ------------PSIE-----ELLYSPEQNDEHIGYLKDRKKP-IIFSMARLDRVKNLTGLVEWYGKNKR----------  600 (815)
T ss_pred             ------------ccch-----hhcCChHHHHHHhCCccCCCCc-EEEEEecCcccCCHHHHHHHHHHHHH----------
Confidence                        0000     0000000 000001  133455 89999999999999999999998765          


Q ss_pred             CchhhHHHhhhccCccccCCCEEEEEEcCCCC------h------HHHHHHHHHcCC-CcEEEecCC---CCcccHHHHH
Q 011979          296 STNEEVFLKEISDGKQYLYPRLLFIITGKGPD------K------ESYEEKIRRLRL-KRVAFRTMW---LSAEDYPLLL  359 (473)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~------~------~~l~~~~~~~~l-~~V~~~g~~---v~~~~i~~~l  359 (473)
                                       ..++++|+|+|+|.+      .      +.+.++++++++ ++|.|+|..   ++.+++..++
T Consensus       601 -----------------l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~i  663 (815)
T PLN00142        601 -----------------LRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYI  663 (815)
T ss_pred             -----------------hCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHH
Confidence                             246899999998721      1      346678899999 799999861   2335666666


Q ss_pred             h-cCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHH
Q 011979          360 G-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVL  436 (473)
Q Consensus       360 ~-~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~  436 (473)
                      . .+|++|+   ||..|+||++++||||||+|||+|+.||+.|+|.++.+|++++  |+++++++|.+++.....|++.+
T Consensus       664 adaaDVfVl---PS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr  740 (815)
T PLN00142        664 ADTKGAFVQ---PALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYW  740 (815)
T ss_pred             HhhCCEEEe---CCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHH
Confidence            6 4799999   7899999999999999999999999999999999999999996  79999999988764323369999


Q ss_pred             HHHHHHHHHhc-cccchHHHHHHHH
Q 011979          437 KKLRNGTLEMG-LSARWATEWEEHA  460 (473)
Q Consensus       437 ~~~~~~~~~~~-~~~~w~~~~~~~~  460 (473)
                      ++|+++|++.+ +.|+|+...++++
T Consensus       741 ~~mg~~Ar~rv~e~FSWe~~A~rll  765 (815)
T PLN00142        741 NKISDAGLQRIYECYTWKIYAERLL  765 (815)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            99999998876 6799887776654

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=3.3e-29  Score=250.11  Aligned_cols=273  Identities=24%  Similarity=0.326  Sum_probs=212.3

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      ..++|+|+++.+  .+........++..++|++++.|+......    ...    ...+..++...+.+|.++++|+.++
T Consensus        91 ~~~~dii~~~~~--~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~----~~~----~~~~~~~~~~~~~~d~ii~~s~~~~  160 (377)
T cd03798          91 RFRPDLIHAHFA--YPDGFAAALLKRKLGIPLVVTLHGSDVNLL----PRK----RLLRALLRRALRRADAVIAVSEALA  160 (377)
T ss_pred             cCCCCEEEEecc--chHHHHHHHHHHhcCCCEEEEeecchhccc----Cch----hhHHHHHHHHHhcCCeEEeCCHHHH
Confidence            478999999964  333334566666777899999999843111    111    1345667778889999999999999


Q ss_pred             HHHHHH--hCCceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCC
Q 011979          179 HELAQN--WGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP  255 (473)
Q Consensus       179 ~~l~~~--~g~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (473)
                      +.+.+.  .+.++.+++++.+ ..+.+......    .++                                     ...
T Consensus       161 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~-------------------------------------~~~  199 (377)
T cd03798         161 DELKALGIDPEKVTVIPNGVDTERFSPADRAEA----RKL-------------------------------------GLP  199 (377)
T ss_pred             HHHHHhcCCCCceEEcCCCcCcccCCCcchHHH----Hhc-------------------------------------cCC
Confidence            999886  3455889999843 44544322111    111                                     112


Q ss_pred             CCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHH
Q 011979          256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI  335 (473)
Q Consensus       256 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~  335 (473)
                      +.+..++++|++.+.||++.+++++..+.+                           ..++++++++|.|+..+.+++.+
T Consensus       200 ~~~~~i~~~g~~~~~k~~~~li~~~~~~~~---------------------------~~~~~~l~i~g~~~~~~~~~~~~  252 (377)
T cd03798         200 EDKKVILFVGRLVPRKGIDYLIEALARLLK---------------------------KRPDVHLVIVGDGPLREALEALA  252 (377)
T ss_pred             CCceEEEEeccCccccCHHHHHHHHHHHHh---------------------------cCCCeEEEEEcCCcchHHHHHHH
Confidence            233489999999999999999999999876                           35789999999999888899999


Q ss_pred             HHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC-
Q 011979          336 RRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS-  413 (473)
Q Consensus       336 ~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~-  413 (473)
                      +++++ ++|.+.|. ++.+++.+++++||++++   ++..+++|++++|||++|+|||+++.++..+++.++.+|++++ 
T Consensus       253 ~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~i~---~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~  328 (377)
T cd03798         253 AELGLEDRVTFLGA-VPHEEVPAYYAAADVFVL---PSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPP  328 (377)
T ss_pred             HhcCCcceEEEeCC-CCHHHHHHHHHhcCeeec---chhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECC
Confidence            98888 79999998 999999999999999999   5666899999999999999999999999999999999999986 


Q ss_pred             -CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH-HhccccchHHHHHHH
Q 011979          414 -SSSELADQLLMLFKGFPDDSDVLKKLRNGTL-EMGLSARWATEWEEH  459 (473)
Q Consensus       414 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~w~~~~~~~  459 (473)
                       |+++++++|.+++++    ++.  ++.+++. ...+.++|+...++.
T Consensus       329 ~~~~~l~~~i~~~~~~----~~~--~~~~~~~~~~~~~~s~~~~~~~~  370 (377)
T cd03798         329 GDPEALAEAILRLLAD----PWL--RLGRAARRRVAERFSWENVAERL  370 (377)
T ss_pred             CCHHHHHHHHHHHhcC----cHH--HHhHHHHHHHHHHhhHHHHHHHH
Confidence             799999999999986    444  4444443 434678887666553

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=3.7e-29  Score=250.97  Aligned_cols=311  Identities=14%  Similarity=0.093  Sum_probs=215.1

Q ss_pred             CCCCChhHH-HHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHH
Q 011979           14 DLGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLL   92 (473)
Q Consensus        14 ~~g~s~r~~-~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (473)
                      .+|+.++.. .++..|.++ ||+|++++.........        .....  +.... ... ..........    ...+
T Consensus        17 ~~GG~~~~~~~l~~~L~~~-g~~V~v~~~~~~~~~~~--------~~~~~--~~~~~-~~~-~~~~~~~~~~----~~~~   79 (335)
T cd03802          17 AYGGTERVVAALTEGLVAR-GHEVTLFASGDSKTAAP--------LVPVV--PEPLR-LDA-PGRDRAEAEA----LALA   79 (335)
T ss_pred             ccCcHHHHHHHHHHHHHhc-CceEEEEecCCCCcccc--------eeecc--CCCcc-ccc-chhhHhhHHH----HHHH
Confidence            577777744 556777776 99999999765432111        11111  00000 000 0000000001    1111


Q ss_pred             HHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEE
Q 011979           93 WFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLC  172 (473)
Q Consensus        93 ~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~  172 (473)
                      ...+ +..++|+||+|.+.....      .++..+.|+|++.|+...       .....        .......++.+++
T Consensus        80 ~~~~-~~~~~Divh~~~~~~~~~------~~~~~~~~~v~~~h~~~~-------~~~~~--------~~~~~~~~~~~~~  137 (335)
T cd03802          80 ERAL-AAGDFDIVHNHSLHLPLP------FARPLPVPVVTTLHGPPD-------PELLK--------LYYAARPDVPFVS  137 (335)
T ss_pred             HHHH-hcCCCCEEEecCcccchh------hhcccCCCEEEEecCCCC-------cccch--------HHHhhCcCCeEEE
Confidence            1222 347899999998543221      455678999999998842       11111        1122356788999


Q ss_pred             cCHHHHHHHHHHhCCceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccccccc
Q 011979          173 VTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV  251 (473)
Q Consensus       173 vS~~~~~~l~~~~g~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (473)
                      +|+..++.+...  .++.+++|+.+ +.|++..                                               
T Consensus       138 ~s~~~~~~~~~~--~~~~vi~ngvd~~~~~~~~-----------------------------------------------  168 (335)
T cd03802         138 ISDAQRRPWPPL--PWVATVHNGIDLDDYPFRG-----------------------------------------------  168 (335)
T ss_pred             ecHHHHhhcccc--cccEEecCCcChhhCCCCC-----------------------------------------------
Confidence            999998777553  55889999844 4443311                                               


Q ss_pred             ccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHH
Q 011979          252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY  331 (473)
Q Consensus       252 ~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l  331 (473)
                         . +...++|+|++.+.||++.++++++.                                .+++|+|+|.|+..+.+
T Consensus       169 ---~-~~~~i~~~Gr~~~~Kg~~~li~~~~~--------------------------------~~~~l~i~G~~~~~~~~  212 (335)
T cd03802         169 ---P-KGDYLLFLGRISPEKGPHLAIRAARR--------------------------------AGIPLKLAGPVSDPDYF  212 (335)
T ss_pred             ---C-CCCEEEEEEeeccccCHHHHHHHHHh--------------------------------cCCeEEEEeCCCCHHHH
Confidence               1 12289999999999999999998754                                46899999999887777


Q ss_pred             HHHHHHcC-C-CcEEEecCCCCcccHHHHHhcCcEEEEeccCC-CCCCCcHHHHHHHhcCCcEEEeccCccccceecCCc
Q 011979          332 EEKIRRLR-L-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKN  408 (473)
Q Consensus       332 ~~~~~~~~-l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s-~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~  408 (473)
                      ...+++.. + ++|.|.|+ ++.+++..+++.||++++   +| ..|++|++++||||||+|||+++.++..|++.++.+
T Consensus       213 ~~~~~~~~~~~~~v~~~G~-~~~~~~~~~~~~~d~~v~---ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~  288 (335)
T cd03802         213 YREIAPELLDGPDIEYLGE-VGGAEKAELLGNARALLF---PILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVT  288 (335)
T ss_pred             HHHHHHhcccCCcEEEeCC-CCHHHHHHHHHhCcEEEe---CCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCc
Confidence            77766664 3 79999998 999999999999999999   55 469999999999999999999999999999999999


Q ss_pred             eEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHH
Q 011979          409 GLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAK  461 (473)
Q Consensus       409 G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~  461 (473)
                      |++++++++++++|.++.+.    +  .+..++.+.   ++|+|+...+++.+
T Consensus       289 g~l~~~~~~l~~~l~~l~~~----~--~~~~~~~~~---~~~s~~~~~~~~~~  332 (335)
T cd03802         289 GFLVDSVEELAAAVARADRL----D--RAACRRRAE---RRFSAARMVDDYLA  332 (335)
T ss_pred             EEEeCCHHHHHHHHHHHhcc----H--HHHHHHHHH---HhCCHHHHHHHHHH
Confidence            99999999999999998664    1  223333343   48998877776554

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=1.1e-28  Score=244.62  Aligned_cols=333  Identities=23%  Similarity=0.282  Sum_probs=228.0

Q ss_pred             EEEEEec-CCCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCE---EEEEeecCCCCCCCCcchhHHHHHH
Q 011979            7 ACVVVLG-DLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSI---HIHTMTQWPTIPRGLPKVLKPVLLL   81 (473)
Q Consensus         7 ~~i~~~~-~~g~s~r~-~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i---~i~~~~~~~~~~~~~~~~~~~~~~~   81 (473)
                      ++++..+ ..||..+. ...+..|.++ ||+|++++............ ...   ......     .. ..........+
T Consensus         2 Il~~~~~~~~gG~~~~~~~l~~~l~~~-g~~v~v~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~-~~~~~~~~~~~   73 (353)
T cd03811           2 ILFVIPSLGGGGAERVLLNLANGLDKR-GYDVTLVVLRDEGDYLELLP-SNVKLIPVRVLK-----LK-SLRDLLAILRL   73 (353)
T ss_pred             eEEEeecccCCCcchhHHHHHHHHHhc-CceEEEEEcCCCCccccccc-cchhhhceeeee-----cc-cccchhHHHHH
Confidence            3333333 35665554 4566777676 99999999764432211111 111   111111     00 11111122222


Q ss_pred             HHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHH
Q 011979           82 LKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEK  161 (473)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~  161 (473)
                      .+.+            +..++|+|+++.+ . ....+..+..+. ++|++++.|+......    ..... ..   ..++
T Consensus        74 ~~~~------------~~~~~dii~~~~~-~-~~~~~~~~~~~~-~~~~i~~~~~~~~~~~----~~~~~-~~---~~~~  130 (353)
T cd03811          74 RRLL------------RKEKPDVVISHLT-T-TPNVLALLAARL-GTKLIVWEHNSLSLEL----KRKLR-LL---LLIR  130 (353)
T ss_pred             HHHH------------HhcCCCEEEEcCc-c-chhHHHHHHhhc-CCceEEEEcCcchhhh----ccchh-HH---HHHH
Confidence            2222            2268999999986 2 222234444434 7999999999853211    11111 11   4677


Q ss_pred             HHhhcCCEEEEcCHHHHHHHHHHhCC---ceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCC
Q 011979          162 YYGKMANGCLCVTQAMQHELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK  237 (473)
Q Consensus       162 ~~~~~ad~vi~vS~~~~~~l~~~~g~---~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  237 (473)
                      ...+.+|.++++|+.+++.+.+.++.   ++.+++|+.+ ..+.+......     .+                      
T Consensus       131 ~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~-----~~----------------------  183 (353)
T cd03811         131 KLYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPL-----EL----------------------  183 (353)
T ss_pred             hhccccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhh-----hc----------------------
Confidence            78889999999999999999988773   4889999854 33433211000     00                      


Q ss_pred             ccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCE
Q 011979          238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL  317 (473)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (473)
                                     ...+.+..++++|++.+.||++.+++|++.+.+                           ..+++
T Consensus       184 ---------------~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~---------------------------~~~~~  221 (353)
T cd03811         184 ---------------GIPPDGPVILAVGRLSPQKGFDTLIRAFALLRK---------------------------EGPDA  221 (353)
T ss_pred             ---------------CCCCCceEEEEEecchhhcChHHHHHHHHHhhh---------------------------cCCCc
Confidence                           112234589999999999999999999999977                           25789


Q ss_pred             EEEEEcCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc
Q 011979          318 LFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY  396 (473)
Q Consensus       318 ~l~ivG~g~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~  396 (473)
                      +|+++|.|+..+.+++.++++++ ++|.+.|.   .+++.++++.||++++   +|..|++|++++|||++|+|||+++.
T Consensus       222 ~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~~d~~i~---ps~~e~~~~~~~Ea~~~G~PvI~~~~  295 (353)
T cd03811         222 RLVILGDGPLREELEALAKELGLADRVHFLGF---QSNPYPYLKAADLFVL---SSRYEGFPNVLLEAMALGTPVVATDC  295 (353)
T ss_pred             eEEEEcCCccHHHHHHHHHhcCCCccEEEecc---cCCHHHHHHhCCEEEe---CcccCCCCcHHHHHHHhCCCEEEcCC
Confidence            99999999999999999999998 79999998   6789999999999999   67779999999999999999999999


Q ss_pred             CccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 011979          397 SCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM  446 (473)
Q Consensus       397 ~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~  446 (473)
                      ++..|++.++.+|++++  +.+++++.+..+... ..+++.+.++++++.+.
T Consensus       296 ~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~  346 (353)
T cd03811         296 PGPREILEDGENGLLVPVGDEAALAAAALALLDL-LLDPELRERLAAAARER  346 (353)
T ss_pred             CChHHHhcCCCceEEECCCCHHHHHHHHHHHHhc-cCChHHHHHHHHHHHHH
Confidence            99999999999999996  577774433333322 22588888888866553

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=1.2e-28  Score=246.98  Aligned_cols=322  Identities=20%  Similarity=0.220  Sum_probs=218.0

Q ss_pred             CCChhHH-HHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 011979           16 GRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWF   94 (473)
Q Consensus        16 g~s~r~~-~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (473)
                      ||..++. ..+..|.++ ||+|++++.......... ...+........+..................  .......+..
T Consensus        15 gG~~~~~~~l~~~L~~~-g~~v~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   90 (359)
T cd03823          15 GGAEVVAHDLAEALAKR-GHEVAVLTAGEDPPRQDK-EVIGVVVYGRPIDEVLRSALPRDLFHLSDYD--NPAVVAEFAR   90 (359)
T ss_pred             cchHHHHHHHHHHHHhc-CCceEEEeCCCCCCCccc-ccccceeeccccccccCCCchhhhhHHHhcc--CHHHHHHHHH
Confidence            5666644 457788876 999999997654332221 1222332222100000110111000000000  0000111112


Q ss_pred             HhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcC
Q 011979           95 LCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT  174 (473)
Q Consensus        95 ~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS  174 (473)
                      ++ +..++|+||++.+..+...  .....+..++|+++++|+.+.      .....          .......|.++++|
T Consensus        91 ~~-~~~~~dii~~~~~~~~~~~--~~~~~~~~~~~~i~~~hd~~~------~~~~~----------~~~~~~~d~ii~~s  151 (359)
T cd03823          91 LL-EDFRPDVVHFHHLQGLGVS--ILRAARDRGIPIVLTLHDYWL------ICPRQ----------GLFKKGGDAVIAPS  151 (359)
T ss_pred             HH-HHcCCCEEEECCccchHHH--HHHHHHhcCCCEEEEEeeeee------ecchh----------hhhccCCCEEEEeC
Confidence            22 3378999999986433322  333344567999999999842      11100          11112339999999


Q ss_pred             HHHHHHHHHHhC--CceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccccccc
Q 011979          175 QAMQHELAQNWG--IKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV  251 (473)
Q Consensus       175 ~~~~~~l~~~~g--~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (473)
                      +.+++.+.+...  .++.+++|+.+ ..+.+..                                               
T Consensus       152 ~~~~~~~~~~~~~~~~~~vi~n~~~~~~~~~~~-----------------------------------------------  184 (359)
T cd03823         152 RFLLDRYVANGLFAEKISVIRNGIDLDRAKRPR-----------------------------------------------  184 (359)
T ss_pred             HHHHHHHHHcCCCccceEEecCCcChhhccccc-----------------------------------------------
Confidence            999999987644  35889999844 3332211                                               


Q ss_pred             ccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHH
Q 011979          252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY  331 (473)
Q Consensus       252 ~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l  331 (473)
                      ...++.+..++|+|++.+.||++.++++++.+.+                             ++++|+++|.|+.....
T Consensus       185 ~~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~-----------------------------~~~~l~i~G~~~~~~~~  235 (359)
T cd03823         185 RAPPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR-----------------------------GDIELVIVGNGLELEEE  235 (359)
T ss_pred             cCCCCCceEEEEEecCccccCHHHHHHHHHHHHh-----------------------------cCcEEEEEcCchhhhHH
Confidence            0012234589999999999999999999998754                             58999999999766544


Q ss_pred             HHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCC-CCCCcHHHHHHHhcCCcEEEeccCccccceecCCce
Q 011979          332 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG  409 (473)
Q Consensus       332 ~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~-~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G  409 (473)
                      ....   +. ++|.++|+ ++.+++.++++.||++++   ||. .|++|++++|||+||+|||+++.++..+++.++.+|
T Consensus       236 ~~~~---~~~~~v~~~g~-~~~~~~~~~~~~ad~~i~---ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g  308 (359)
T cd03823         236 SYEL---EGDPRVEFLGA-YPQEEIDDFYAEIDVLVV---PSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNG  308 (359)
T ss_pred             HHhh---cCCCeEEEeCC-CCHHHHHHHHHhCCEEEE---cCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcE
Confidence            4333   34 79999998 999999999999999999   564 799999999999999999999999999999999899


Q ss_pred             EEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          410 LLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       410 ~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      ++++  |+++++++|.+++++    ++.++++++++++..
T Consensus       309 ~~~~~~d~~~l~~~i~~l~~~----~~~~~~~~~~~~~~~  344 (359)
T cd03823         309 LLFPPGDAEDLAAALERLIDD----PDLLERLRAGIEPPR  344 (359)
T ss_pred             EEECCCCHHHHHHHHHHHHhC----hHHHHHHHHhHHHhh
Confidence            9996  589999999999985    889999999998854

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).

>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=99.97  E-value=1.1e-28  Score=260.49  Aligned_cols=283  Identities=13%  Similarity=0.121  Sum_probs=209.6

Q ss_pred             hhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEE-ecCchhhhhhhhcCCCchHHHHHHHHHH--HHhhcCCEEEEcC
Q 011979           98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVD-WHNFGYTLLSLSLGRRSHFVSIYRWIEK--YYGKMANGCLCVT  174 (473)
Q Consensus        98 ~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~-~h~~~~~~~~~~~~~~~~~~~~~~~~e~--~~~~~ad~vi~vS  174 (473)
                      +..+||+||+|+.   .+...+.+++.+.++|++++ .|.+ +.     ......+..-+....+  .+...+| ++++|
T Consensus       277 r~~rpDIVHt~~~---~a~l~g~laA~lagvpviv~~~h~~-~~-----~~~~r~~~~e~~~~~~a~~i~~~sd-~v~~s  346 (578)
T PRK15490        277 CERKLDYLSVWQD---GACLMIALAALIAGVPRIQLGLRGL-PP-----VVRKRLFKPEYEPLYQALAVVPGVD-FMSNN  346 (578)
T ss_pred             HHcCCCEEEEcCc---ccHHHHHHHHHhcCCCEEEEeeccc-CC-----cchhhHHHHHHHHhhhhceeEecch-hhhcc
Confidence            3489999999983   33335777787888999765 5553 11     0111111111111111  2234556 77899


Q ss_pred             HHHHHHHHHHhCCc---eEEeeCC-CCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccc
Q 011979          175 QAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID  250 (473)
Q Consensus       175 ~~~~~~l~~~~g~~---~~vi~n~-~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (473)
                      ...++.+.+.++.+   +.+|||| ++..|.+... .....+..+..                                 
T Consensus       347 ~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~-~~~~~r~~~~~---------------------------------  392 (578)
T PRK15490        347 HCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSE-VPHKIWQQFTQ---------------------------------  392 (578)
T ss_pred             HHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccch-hhHHHHHHhhh---------------------------------
Confidence            99999888877765   8999999 4456666431 11122222210                                 


Q ss_pred             cccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHH
Q 011979          251 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES  330 (473)
Q Consensus       251 ~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~  330 (473)
                       .++++.+ +++++|++.+.||+..+++++..+.++                           .|+++|+|+|+|+..++
T Consensus       393 -~l~~~~~-vIg~VgRl~~~Kg~~~LI~A~a~llk~---------------------------~pdirLvIVGdG~~~ee  443 (578)
T PRK15490        393 -KTQDADT-TIGGVFRFVGDKNPFAWIDFAARYLQH---------------------------HPATRFVLVGDGDLRAE  443 (578)
T ss_pred             -ccCCCCc-EEEEEEEEehhcCHHHHHHHHHHHHhH---------------------------CCCeEEEEEeCchhHHH
Confidence             1122233 889999999999999999999887662                           58999999999999999


Q ss_pred             HHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCce
Q 011979          331 YEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG  409 (473)
Q Consensus       331 l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G  409 (473)
                      +++.++++++ ++|.|+|+   .+|++.+|+.+|++|+   ||..|+||++++||||||+|||+|+.+|..|+|.++.+|
T Consensus       444 Lk~la~elgL~d~V~FlG~---~~Dv~~~LaaADVfVl---PS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG  517 (578)
T PRK15490        444 AQKRAEQLGILERILFVGA---SRDVGYWLQKMNVFIL---FSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSG  517 (578)
T ss_pred             HHHHHHHcCCCCcEEECCC---hhhHHHHHHhCCEEEE---cccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcE
Confidence            9999999999 89999998   7899999999999999   788899999999999999999999999999999999999


Q ss_pred             EEeC--CHHHHHHHHH---HHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHHHHH
Q 011979          410 LLFS--SSSELADQLL---MLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAKPL  463 (473)
Q Consensus       410 ~~~~--~~~~la~~i~---~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~  463 (473)
                      ++++  |++++++.+.   .+.+.    .+.+..|++++++.. ++|+|+...+++.+-+
T Consensus       518 ~LVp~~D~~aLa~ai~lA~aL~~l----l~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~  573 (578)
T PRK15490        518 FILDDAQTVNLDQACRYAEKLVNL----WRSRTGICQQTQSFLQERFTVEHMVGTFVKTI  573 (578)
T ss_pred             EEECCCChhhHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Confidence            9996  5777777763   33332    445567889998876 6799998888866544

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional

Probab=99.97  E-value=1.3e-28  Score=252.49  Aligned_cols=244  Identities=15%  Similarity=0.182  Sum_probs=183.2

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCe--EEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHH
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSA--FIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQA  176 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~--~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~  176 (473)
                      ..+||+||++.+.   ....+.++++..+.|  ++...|...        ... ...    ...  ..+.+|.++++|+.
T Consensus        82 ~~~~Dii~~~~~~---~~~~~~~~~~~~~~~~~~~~~~h~~~--------~~~-~~~----~~~--~~~~~d~~i~~S~~  143 (359)
T PRK09922         82 ETQPDIVICIDVI---SCLYANKARKKSGKQFKIFSWPHFSL--------DHK-KHA----ECK--KITCADYHLAISSG  143 (359)
T ss_pred             hcCCCEEEEcCHH---HHHHHHHHHHHhCCCCeEEEEecCcc--------ccc-chh----hhh--hhhcCCEEEEcCHH
Confidence            3789999999842   222355555554444  455555431        111 000    111  12689999999999


Q ss_pred             HHHHHHHHhCCc---eEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccc
Q 011979          177 MQHELAQNWGIK---ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF  252 (473)
Q Consensus       177 ~~~~l~~~~g~~---~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (473)
                      +++.+.+ +|.+   +.++||+.+ +.+....                                               .
T Consensus       144 ~~~~~~~-~~~~~~ki~vi~N~id~~~~~~~~-----------------------------------------------~  175 (359)
T PRK09922        144 IKEQMMA-RGISAQRISVIYNPVEIKTIIIPP-----------------------------------------------P  175 (359)
T ss_pred             HHHHHHH-cCCCHHHEEEEcCCCCHHHccCCC-----------------------------------------------c
Confidence            9999986 4653   789999854 2221110                                               0


Q ss_pred             cCCCCCeEEEEEeecc--CCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHH
Q 011979          253 LKPNRPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES  330 (473)
Q Consensus       253 ~~~~~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~  330 (473)
                       ..+.+..++|+||+.  ..||++.+++|+..+.                              ++++|+|+|+|++.+.
T Consensus       176 -~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~------------------------------~~~~l~ivG~g~~~~~  224 (359)
T PRK09922        176 -ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT------------------------------GEWQLHIIGDGSDFEK  224 (359)
T ss_pred             -ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC------------------------------CCeEEEEEeCCccHHH
Confidence             011233899999986  4599999999998762                              4799999999999999


Q ss_pred             HHHHHHHcCC-CcEEEecCCCC--cccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec-cCccccceecC
Q 011979          331 YEEKIRRLRL-KRVAFRTMWLS--AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVD  406 (473)
Q Consensus       331 l~~~~~~~~l-~~V~~~g~~v~--~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~-~~~~~e~i~~~  406 (473)
                      +++.++++++ ++|.|+|. ++  .+++..+|+.+|++|+   +|..|+||++++||||||+|||+++ .++..|++.++
T Consensus       225 l~~~~~~~~l~~~v~f~G~-~~~~~~~~~~~~~~~d~~v~---~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~  300 (359)
T PRK09922        225 CKAYSRELGIEQRIIWHGW-QSQPWEVVQQKIKNVSALLL---TSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPG  300 (359)
T ss_pred             HHHHHHHcCCCCeEEEecc-cCCcHHHHHHHHhcCcEEEE---CCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCC
Confidence            9999999999 79999997 53  4789999999999999   6888999999999999999999999 89999999999


Q ss_pred             CceEEeC--CHHHHHHHHHHHHhCCCCCHH--HHHHHHHHHHHhc
Q 011979          407 KNGLLFS--SSSELADQLLMLFKGFPDDSD--VLKKLRNGTLEMG  447 (473)
Q Consensus       407 ~~G~~~~--~~~~la~~i~~l~~~~~~~~~--~~~~~~~~~~~~~  447 (473)
                      .+|++++  |+++++++|.+++++    ++  ....++++++++.
T Consensus       301 ~~G~lv~~~d~~~la~~i~~l~~~----~~~~~~~~~~~~~~~~~  341 (359)
T PRK09922        301 LNGELYTPGNIDEFVGKLNKVISG----EVKYQHDAIPNSIERFY  341 (359)
T ss_pred             CceEEECCCCHHHHHHHHHHHHhC----cccCCHHHHHHHHHHhh
Confidence            9999985  799999999999996    44  3455666666644

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=6.4e-28  Score=244.26  Aligned_cols=278  Identities=17%  Similarity=0.184  Sum_probs=200.9

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhh-CCCeEEEEecCchhhhhhhhc-----------------CCC---chHHHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSL-----------------GRR---SHFVSIYRW  158 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~-----------------~~~---~~~~~~~~~  158 (473)
                      .++|+||+|.+......  ...+.+. +++|+|+++|+.+........                 ...   .......+.
T Consensus        50 ~~~diih~~~~~~~~~~--~~~~~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (365)
T cd03825          50 INADIVHLHWIHGGFLS--IEDLSKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRR  127 (365)
T ss_pred             ccCCEEEEEccccCccC--HHHHHHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHH
Confidence            78999999885443222  2222222 589999999987421110000                 000   111223333


Q ss_pred             HHHHHhhcCCEEEEcCHHHHHHHHHHhC---CceEEeeCCC-CCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcC
Q 011979          159 IEKYYGKMANGCLCVTQAMQHELAQNWG---IKATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGME  234 (473)
Q Consensus       159 ~e~~~~~~ad~vi~vS~~~~~~l~~~~g---~~~~vi~n~~-~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  234 (473)
                      ..+.+...++.++++|+.+++.+.+.++   .++.+++|+. .+.|.+...   ...+..++                  
T Consensus       128 ~~~~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~---~~~~~~~~------------------  186 (365)
T cd03825         128 KRKAWADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRDK---REARKRLG------------------  186 (365)
T ss_pred             HHHHhccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCcH---HHHHHHhC------------------
Confidence            3444445678999999999999887653   3489999994 455555432   22232222                  


Q ss_pred             CCCccchhhhcccccccccCCCCCeEEEEEeeccC--CCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccc
Q 011979          235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTP--DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQY  312 (473)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (473)
                                        .+++.+ +++++|+...  .||++.+++|+..+.++                          
T Consensus       187 ------------------~~~~~~-~i~~~~~~~~~~~K~~~~ll~a~~~l~~~--------------------------  221 (365)
T cd03825         187 ------------------LPADKK-IILFGAVGGTDPRKGFDELIEALKRLAER--------------------------  221 (365)
T ss_pred             ------------------CCCCCe-EEEEEecCCCccccCHHHHHHHHHHhhhc--------------------------
Confidence                              223333 6666666655  89999999999988651                          


Q ss_pred             cCCCEEEEEEcCCCChHHHHHHHHHcCC-CcEEEecCCCC-cccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCc
Q 011979          313 LYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLS-AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLP  390 (473)
Q Consensus       313 ~~~~~~l~ivG~g~~~~~l~~~~~~~~l-~~V~~~g~~v~-~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~P  390 (473)
                      ..++++++++|.++.....       ++ .+|.++|. ++ .+++..+|+.||++++   ||..|++|++++|||+||+|
T Consensus       222 ~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~-~~~~~~~~~~~~~ad~~l~---ps~~e~~g~~~~Eam~~g~P  290 (365)
T cd03825         222 WKDDIELVVFGASDPEIPP-------DLPFPVHYLGS-LNDDESLALIYSAADVFVV---PSLQENFPNTAIEALACGTP  290 (365)
T ss_pred             cCCCeEEEEeCCCchhhhc-------cCCCceEecCC-cCCHHHHHHHHHhCCEEEe---ccccccccHHHHHHHhcCCC
Confidence            1478999999998753321       33 68999998 77 8899999999999999   68789999999999999999


Q ss_pred             EEEeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHH
Q 011979          391 VCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHA  460 (473)
Q Consensus       391 vI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~  460 (473)
                      ||+++.+++.|++.++.+|++++  |+++++++|.+++++    ++.+.++++++++.. +.++|+...+++.
T Consensus       291 vI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  359 (365)
T cd03825         291 VVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLAD----PDEREELGEAARELAENEFDSRVQAKRYL  359 (365)
T ss_pred             EEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            99999999999999998999986  799999999999985    888999999999876 5688887776644

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=1.5e-28  Score=250.15  Aligned_cols=252  Identities=17%  Similarity=0.175  Sum_probs=190.1

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchh-------hhhhhhcCC-C----chHHHHHHHHHHHHhhc
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGY-------TLLSLSLGR-R----SHFVSIYRWIEKYYGKM  166 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-------~~~~~~~~~-~----~~~~~~~~~~e~~~~~~  166 (473)
                      ..++|+|++++++..      ..+....+.|.++.+|....       .... ..+. .    ......++.+++...+.
T Consensus        81 ~~~~D~v~~~~~~~~------~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (351)
T cd03804          81 LSGYDLVISSSHAVA------KGVITRPDQLHICYCHTPMRYAWDLYHDYLK-ESGLGKRLALRLLLHYLRIWDRRSAAR  153 (351)
T ss_pred             ccCCCEEEEcCcHHh------ccccCCCCCcEEEEeCCchHHHhcCchHhhh-hcccchhhHHHHHHHHHHHHHHHHhcC
Confidence            378999998874211      11124567888888886421       1110 0010 1    11234456667777889


Q ss_pred             CCEEEEcCHHHHHHHHHHhCCceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhc
Q 011979          167 ANGCLCVTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTS  245 (473)
Q Consensus       167 ad~vi~vS~~~~~~l~~~~g~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (473)
                      +|.++++|+.+++.+.+.++.+..+++|+.+ +.|.+..                                         
T Consensus       154 ~d~ii~~S~~~~~~~~~~~~~~~~vi~~~~d~~~~~~~~-----------------------------------------  192 (351)
T cd03804         154 VDYFIANSRFVARRIKKYYGRDATVIYPPVDTDRFTPAE-----------------------------------------  192 (351)
T ss_pred             CCEEEECCHHHHHHHHHHhCCCcEEECCCCCHhhcCcCC-----------------------------------------
Confidence            9999999999999998888888888988743 3332210                                         


Q ss_pred             ccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCC
Q 011979          246 LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG  325 (473)
Q Consensus       246 ~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g  325 (473)
                               ...+ .++|+|++.+.||++.+++|+..+                               + ++|+|+|+|
T Consensus       193 ---------~~~~-~il~~G~~~~~K~~~~li~a~~~~-------------------------------~-~~l~ivG~g  230 (351)
T cd03804         193 ---------EKED-YYLSVGRLVPYKRIDLAIEAFNKL-------------------------------G-KRLVVIGDG  230 (351)
T ss_pred             ---------CCCC-EEEEEEcCccccChHHHHHHHHHC-------------------------------C-CcEEEEECC
Confidence                     1122 789999999999999999999864                               4 789999999


Q ss_pred             CChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceec
Q 011979          326 PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV  405 (473)
Q Consensus       326 ~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~  405 (473)
                      +..+.+++    ...++|.|+|+ ++.+++..+|+.||++++   ||. |++|++++||||||+|||+++.++..|++.+
T Consensus       231 ~~~~~l~~----~~~~~V~~~g~-~~~~~~~~~~~~ad~~v~---ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~  301 (351)
T cd03804         231 PELDRLRA----KAGPNVTFLGR-VSDEELRDLYARARAFLF---PAE-EDFGIVPVEAMASGTPVIAYGKGGALETVID  301 (351)
T ss_pred             hhHHHHHh----hcCCCEEEecC-CCHHHHHHHHHhCCEEEE---CCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeC
Confidence            87666665    12279999998 999999999999999999   577 9999999999999999999999999999999


Q ss_pred             CCceEEeC--CHHHHHHHHHHHHhCCCCCH-HHHHHHHHHHHHhccccchHHHHH
Q 011979          406 DKNGLLFS--SSSELADQLLMLFKGFPDDS-DVLKKLRNGTLEMGLSARWATEWE  457 (473)
Q Consensus       406 ~~~G~~~~--~~~~la~~i~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~w~~~~~  457 (473)
                      +.+|++++  |+++++++|..++++    + ..++.+++++.    +++|++.-+
T Consensus       302 ~~~G~~~~~~~~~~la~~i~~l~~~----~~~~~~~~~~~~~----~~~~~~~~~  348 (351)
T cd03804         302 GVTGILFEEQTVESLAAAVERFEKN----EDFDPQAIRAHAE----RFSESRFRE  348 (351)
T ss_pred             CCCEEEeCCCCHHHHHHHHHHHHhC----cccCHHHHHHHHH----hcCHHHHHH
Confidence            99999985  699999999999986    4 45566666665    466665433

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=99.97  E-value=2.8e-28  Score=253.45  Aligned_cols=344  Identities=15%  Similarity=0.134  Sum_probs=225.4

Q ss_pred             cCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCCccccc-----CCCEEEEEeecCCCCCCCCcchhHHHHHH------
Q 011979           13 GDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILE-----HPSIHIHTMTQWPTIPRGLPKVLKPVLLL------   81 (473)
Q Consensus        13 ~~~g~s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~-----~~~i~i~~~~~~~~~~~~~~~~~~~~~~~------   81 (473)
                      .+-|+.-|+.+.+..|++.  |+|+++|...+........     .+.+.+...+  +.     ....+.+..+      
T Consensus        12 ~~~G~~~r~~~~~~~L~~~--~~v~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~-----~~~~~~~~~l~~~~p~   82 (397)
T TIGR03087        12 PNKGDKIRSFHLLRHLAAR--HRVHLGTFVDDPEDWQYAAALRPLCEEVCVVPLD--PR-----VARLRSLLGLLTGEPL   82 (397)
T ss_pred             CCCCCcEeHHHHHHHHHhc--CcEEEEEeCCCcccHHHHHHHHHHhheeEEeecC--cH-----HHHHHHHhhhcCCCCC
Confidence            3457888999999999875  9999999865332111100     1233332222  00     0000000000      


Q ss_pred             -HHH--HHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHH-hhCCCeEEEEecCchhhhhhhhcC----CCchHH
Q 011979           82 -LKP--LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLLSLSLG----RRSHFV  153 (473)
Q Consensus        82 -~~~--~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~-~~~~~~~i~~~h~~~~~~~~~~~~----~~~~~~  153 (473)
                       ...  -.++...+..++ +..++|+||++++...      ..+. ...++|+|++.|+...........    ..+.+.
T Consensus        83 ~~~~~~~~~~~~~l~~~~-~~~~~D~v~~~~~~~~------~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~  155 (397)
T TIGR03087        83 SLPYYRSRRLARWVNALL-AAEPVDAIVVFSSAMA------QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIY  155 (397)
T ss_pred             cchhhCCHHHHHHHHHHH-hhCCCCEEEEeccccc------eeccccccCCCeEeehhhHHHHHHHHHHhccCcchhHHH
Confidence             000  011111222223 2378999999984322      1222 356789999999864222111111    111111


Q ss_pred             ----HHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhC---CceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCc
Q 011979          154 ----SIYRWIEKYYGKMANGCLCVTQAMQHELAQNWG---IKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGV  225 (473)
Q Consensus       154 ----~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g---~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~  225 (473)
                          +.+.++|+.+.+.+|.++++|+..++.+.+..+   .++.+++||.+ +.|.+..... .                
T Consensus       156 ~~~~~~~~~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~~-~----------------  218 (397)
T TIGR03087       156 RREGRLLLAYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDYP-N----------------  218 (397)
T ss_pred             HHHHHHHHHHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCcccc-C----------------
Confidence                234567898999999999999999999987543   24789999944 5565432100 0                


Q ss_pred             ccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHH----HHhHHHHHhhhccCCCchhhH
Q 011979          226 QDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAA----LMYDRRVAAILNEDDSTNEEV  301 (473)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~----~~l~~~~~~~~~~~~~~~~~~  301 (473)
                                                ...++.+ .++|+|++...||++.++.++    ..+.+                
T Consensus       219 --------------------------~~~~~~~-~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~----------------  255 (397)
T TIGR03087       219 --------------------------PYPPGKR-VLVFTGAMDYWPNIDAVVWFAERVFPAVRA----------------  255 (397)
T ss_pred             --------------------------CCCCCCc-EEEEEEecCCccCHHHHHHHHHHHHHHHHH----------------
Confidence                                      1122233 899999999999999988544    44443                


Q ss_pred             HHhhhccCccccCCCEEEEEEcCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCC-CCCCCcH
Q 011979          302 FLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPM  379 (473)
Q Consensus       302 ~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s-~~e~~p~  379 (473)
                                 ..|+++|+|+|+|+.. .    +++++. ++|.|+|. ++  ++..+|+.||++|+|   | .++++|+
T Consensus       256 -----------~~p~~~l~ivG~g~~~-~----~~~l~~~~~V~~~G~-v~--~~~~~~~~adv~v~P---s~~~eG~~~  313 (397)
T TIGR03087       256 -----------RRPAAEFYIVGAKPSP-A----VRALAALPGVTVTGS-VA--DVRPYLAHAAVAVAP---LRIARGIQN  313 (397)
T ss_pred             -----------HCCCcEEEEECCCChH-H----HHHhccCCCeEEeee-cC--CHHHHHHhCCEEEec---ccccCCccc
Confidence                       2589999999999853 2    333433 68999998 54  899999999999994   5 4688999


Q ss_pred             HHHHHHhcCCcEEEeccCccccceecCCceEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHH
Q 011979          380 KVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWE  457 (473)
Q Consensus       380 kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~  457 (473)
                      +++||||||+|||+|+.++ ..+...+++|+++. |+++++++|.+++++    ++.+++|++++++.. ++|+|+...+
T Consensus       314 ~~lEAma~G~PVV~t~~~~-~~i~~~~~~g~lv~~~~~~la~ai~~ll~~----~~~~~~~~~~ar~~v~~~fsw~~~~~  388 (397)
T TIGR03087       314 KVLEAMAMAKPVVASPEAA-EGIDALPGAELLVAADPADFAAAILALLAN----PAEREELGQAARRRVLQHYHWPRNLA  388 (397)
T ss_pred             HHHHHHHcCCCEEecCccc-ccccccCCcceEeCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence            9999999999999998653 33334456788875 899999999999985    889999999999876 6799987766


Q ss_pred             HH
Q 011979          458 EH  459 (473)
Q Consensus       458 ~~  459 (473)
                      +.
T Consensus       389 ~~  390 (397)
T TIGR03087       389 RL  390 (397)
T ss_pred             HH
Confidence            63

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>TIGR02918 accessory Sec system glycosylation protein GtfA

Probab=99.97  E-value=3.1e-28  Score=260.04  Aligned_cols=270  Identities=13%  Similarity=0.212  Sum_probs=208.1

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCch-HHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      .++|++|++.|+...    ..+......+|+++.+|+-++...  ....... +...+..... ..+.+|.+|++|+..+
T Consensus       210 ~~~di~i~dr~~~~~----~~~~~~~~~~~~v~~lH~~h~~~~--~~~~~~~~~~~~y~~~~~-~~~~~D~iI~~S~~~~  282 (500)
T TIGR02918       210 TKKDIIILDRSTGIG----QAVLENKGPAKLGVVVHAEHFSES--ATNETYILWNNYYEYQFS-NADYIDFFITATDIQN  282 (500)
T ss_pred             CCCCEEEEcCCcccc----hHHHhcCCCceEEEEEChhhhcCc--cCcchhHHHHHHHHHHHh-chhhCCEEEECCHHHH
Confidence            689999998865422    113344567999999998643111  0111111 1222222222 2456899999999999


Q ss_pred             HHHHHHhC------CceEEeeCCCCC-CcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccccccc
Q 011979          179 HELAQNWG------IKATVLYDQPPE-FFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV  251 (473)
Q Consensus       179 ~~l~~~~g------~~~~vi~n~~~~-~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (473)
                      +.+.+.++      .++.++|+|..+ .+.+.                                                
T Consensus       283 ~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~------------------------------------------------  314 (500)
T TIGR02918       283 QILKNQFKKYYNIEPRIYTIPVGSLDELQYPE------------------------------------------------  314 (500)
T ss_pred             HHHHHHhhhhcCCCCcEEEEcCCCcccccCcc------------------------------------------------
Confidence            88876553      237888888432 22111                                                


Q ss_pred             ccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHH
Q 011979          252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY  331 (473)
Q Consensus       252 ~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l  331 (473)
                        ...++..++++||+.+.||++.|++|+..+.+                           ..|+++|.|+|+|+..+.+
T Consensus       315 --~~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~---------------------------~~p~~~l~i~G~G~~~~~l  365 (500)
T TIGR02918       315 --QERKPFSIITASRLAKEKHIDWLVKAVVKAKK---------------------------SVPELTFDIYGEGGEKQKL  365 (500)
T ss_pred             --cccCCeEEEEEeccccccCHHHHHHHHHHHHh---------------------------hCCCeEEEEEECchhHHHH
Confidence              01133489999999999999999999999887                           3789999999999998999


Q ss_pred             HHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC-ccccceecCCce
Q 011979          332 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVDKNG  409 (473)
Q Consensus       332 ~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~-~~~e~i~~~~~G  409 (473)
                      +++++++++ ++|.|+|.    .++..+|+.||++|+   ||..|+||++++||||||+|||+++.+ |.+|+|.++.+|
T Consensus       366 ~~~i~~~~l~~~V~f~G~----~~~~~~~~~adv~v~---pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG  438 (500)
T TIGR02918       366 QKIINENQAQDYIHLKGH----RNLSEVYKDYELYLS---ASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNG  438 (500)
T ss_pred             HHHHHHcCCCCeEEEcCC----CCHHHHHHhCCEEEE---cCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCE
Confidence            999999998 79999996    378999999999999   788999999999999999999999985 899999999999


Q ss_pred             EEeC-C---------HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Q 011979          410 LLFS-S---------SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITE  466 (473)
Q Consensus       410 ~~~~-~---------~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  466 (473)
                      ++++ +         ++++|++|.++++     ++.+.+|++++++.++.++|+..|++.. .++++
T Consensus       439 ~lv~~~~~~~d~~~~~~~la~~I~~ll~-----~~~~~~~~~~a~~~a~~fs~~~v~~~w~-~ll~~  499 (500)
T TIGR02918       439 YLIPIDEEEDDEDQIITALAEKIVEYFN-----SNDIDAFHEYSYQIAEGFLTANIIEKWK-KLVRE  499 (500)
T ss_pred             EEEeCCccccchhHHHHHHHHHHHHHhC-----hHHHHHHHHHHHHHHHhcCHHHHHHHHH-HHHhh
Confidence            9986 1         8899999999985     3468999999999889999998888754 45444

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=5.2e-28  Score=252.71  Aligned_cols=266  Identities=18%  Similarity=0.202  Sum_probs=203.8

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCC-CeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRR-SAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~-~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      .++|++|.+-  ..+......+++.... .++|++.|+...  .     .... ...+..+.+.+.+.+|.++++|+..+
T Consensus       126 ~~~~v~~sy~--~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~--~-----~~~~-~~~~~~~~~~~~~~~d~ii~~S~~~~  195 (407)
T cd04946         126 GQGTVFYSYW--LHETAYALALLKKEYLRKRVISRAHGYDL--Y-----EDRY-PSGYIPLRRYLLSSLDAVFPCSEQGR  195 (407)
T ss_pred             cCceEEEEec--CchHHHHHHHHHHhcCCceEEEEeccchh--h-----hhhc-cccchHHHHHHHhcCCEEEECCHHHH
Confidence            3445665543  2333322333344333 459999997631  1     1000 01112344556778999999999999


Q ss_pred             HHHHHHhCCc---eEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccC
Q 011979          179 HELAQNWGIK---ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK  254 (473)
Q Consensus       179 ~~l~~~~g~~---~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (473)
                      +++.+.++..   +.++++|.+ ..+.+.                                                 ..
T Consensus       196 ~~l~~~~~~~~~ki~vi~~gv~~~~~~~~-------------------------------------------------~~  226 (407)
T cd04946         196 NYLQKRYPAYKEKIKVSYLGVSDPGIISK-------------------------------------------------PS  226 (407)
T ss_pred             HHHHHHCCCccccEEEEECCcccccccCC-------------------------------------------------CC
Confidence            9999887753   678888843 222111                                                 01


Q ss_pred             CCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCC--CEEEEEEcCCCChHHHH
Q 011979          255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP--RLLFIITGKGPDKESYE  332 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ivG~g~~~~~l~  332 (473)
                      .+.+..++++|++.+.||++.+++|+..+.++                           .|  +++++++|+|+..+.++
T Consensus       227 ~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~---------------------------~p~~~l~~~iiG~g~~~~~l~  279 (407)
T cd04946         227 KDDTLRIVSCSYLVPVKRVDLIIKALAALAKA---------------------------RPSIKIKWTHIGGGPLEDTLK  279 (407)
T ss_pred             CCCCEEEEEeeccccccCHHHHHHHHHHHHHh---------------------------CCCceEEEEEEeCchHHHHHH
Confidence            12344899999999999999999999999773                           33  57789999999999999


Q ss_pred             HHHHHcCC-CcEEEecCCCCcccHHHHHhc--CcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCce
Q 011979          333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG  409 (473)
Q Consensus       333 ~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~--adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G  409 (473)
                      +++++++. ++|.|+|. ++.+++..+|+.  +|++++   +|..|++|++++||||||+|||+|+.+|..|++.++.+|
T Consensus       280 ~~~~~~~~~~~V~f~G~-v~~~e~~~~~~~~~~~v~v~---~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G  355 (407)
T cd04946         280 ELAESKPENISVNFTGE-LSNSEVYKLYKENPVDVFVN---LSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNG  355 (407)
T ss_pred             HHHHhcCCCceEEEecC-CChHHHHHHHhhcCCCEEEe---CCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcE
Confidence            99988777 68999998 999999999986  678887   788999999999999999999999999999999999899


Q ss_pred             EEeC---CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHH
Q 011979          410 LLFS---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEH  459 (473)
Q Consensus       410 ~~~~---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~  459 (473)
                      ++++   |+++++++|.+++++    ++.+++|+++|++.. ++|+|+...++.
T Consensus       356 ~l~~~~~~~~~la~~I~~ll~~----~~~~~~m~~~ar~~~~~~f~~~~~~~~~  405 (407)
T cd04946         356 LLLSKDPTPNELVSSLSKFIDN----EEEYQTMREKAREKWEENFNASKNYREF  405 (407)
T ss_pred             EEeCCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHcCHHHhHHHh
Confidence            9884   589999999999984    899999999999987 779988877664

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.

>PRK10125 putative glycosyl transferase; Provisional

Probab=99.97  E-value=2.2e-27  Score=247.87  Aligned_cols=350  Identities=11%  Similarity=0.039  Sum_probs=216.4

Q ss_pred             CCeEEEEEecCCCCChhHHHH-HHHHHhhCCCcEEEEecCCCCCCcccccCCCE-EEEEeecCCCCCCCCcchhHHH---
Q 011979            4 RGRACVVVLGDLGRSPRMQYQ-ALSLARQMSLEVDVVAYGGSKPHAAILEHPSI-HIHTMTQWPTIPRGLPKVLKPV---   78 (473)
Q Consensus         4 ~~~~~i~~~~~~g~s~r~~~~-a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i-~i~~~~~~~~~~~~~~~~~~~~---   78 (473)
                      ||+++|.....+|+++|+... +..+.++ ||+|.++...+..+.... ...++ .+....      ..........   
T Consensus         1 mkil~i~~~l~~GGaeri~~~L~~~l~~~-G~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~   72 (405)
T PRK10125          1 MNILQFNVRLAEGGAAGVALDLHQRALQQ-GLASHFVYGYGKGGKESV-SHQNYPQVIKHT------PRMTAMANIALFR   72 (405)
T ss_pred             CeEEEEEeeecCCchhHHHHHHHHHHHhc-CCeEEEEEecCCCccccc-ccCCcceEEEec------ccHHHHHHHHHHH
Confidence            688888878789999999865 4556665 999999987755433211 11222 122222      1111111111   


Q ss_pred             ---HHHHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCch--hHHHHHHH----HHhhCCCeEEEEecCchhhh--------
Q 011979           79 ---LLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSV--PTLVAVKW----ASSLRRSAFIVDWHNFGYTL--------  141 (473)
Q Consensus        79 ---~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~--~~~~~~~~----~~~~~~~~~i~~~h~~~~~~--------  141 (473)
                         .........    +..++.+..+||+||.|+....  ....+..+    ..+..++|+|+|.||+|.--        
T Consensus        73 ~~~~~~~~~~~~----~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~  148 (405)
T PRK10125         73 LFNRDLFGNFNE----LYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDG  148 (405)
T ss_pred             hcchhhcchHHH----HHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcc
Confidence               000011111    1122223479999999985532  11111221    12245789999999997210        


Q ss_pred             ---hhhhc--------CCCchH---HHHH---HHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-ceEEeeCCCC-CCccc
Q 011979          142 ---LSLSL--------GRRSHF---VSIY---RWIEKYYGKMANGCLCVTQAMQHELAQNWGI-KATVLYDQPP-EFFHP  202 (473)
Q Consensus       142 ---~~~~~--------~~~~~~---~~~~---~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g~-~~~vi~n~~~-~~f~~  202 (473)
                         .....        .+....   .+.+   +..-+...+.++.++++|+.+++.+.+.++. ++.+|+||.+ +.+.+
T Consensus       149 C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~~~~i~vI~NGid~~~~~~  228 (405)
T PRK10125        149 CEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAI  228 (405)
T ss_pred             cccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcCCCCEEEeCCCcCcccccc
Confidence               00000        111111   1111   1112222345689999999999998876664 4899999954 22211


Q ss_pred             CChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeec--cCCCCHHHHHHHH
Q 011979          203 TSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSW--TPDEDFGILLEAA  280 (473)
Q Consensus       203 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~--~~~K~~~~li~a~  280 (473)
                      ...  ....                                        ..+++++ .++++|+.  .+.||++.+++|+
T Consensus       229 ~~~--~~~~----------------------------------------~~~~~~~-~il~v~~~~~~~~Kg~~~li~A~  265 (405)
T PRK10125        229 LAE--LPPV----------------------------------------RETQGKP-KIAVVAHDLRYDGKTDQQLVREM  265 (405)
T ss_pred             ccc--cccc----------------------------------------ccCCCCC-EEEEEEeccccCCccHHHHHHHH
Confidence            110  0000                                        1122333 78889983  4679999999999


Q ss_pred             HHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHh
Q 011979          281 LMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG  360 (473)
Q Consensus       281 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~  360 (473)
                      ..+                              .++++|+|+|+|+...          .++|.++|..-+.+++..+|+
T Consensus       266 ~~l------------------------------~~~~~L~ivG~g~~~~----------~~~v~~~g~~~~~~~l~~~y~  305 (405)
T PRK10125        266 MAL------------------------------GDKIELHTFGKFSPFT----------AGNVVNHGFETDKRKLMSALN  305 (405)
T ss_pred             HhC------------------------------CCCeEEEEEcCCCccc----------ccceEEecCcCCHHHHHHHHH
Confidence            876                              3579999999885321          146888887336789999999


Q ss_pred             cCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHH
Q 011979          361 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKK  438 (473)
Q Consensus       361 ~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~  438 (473)
                      +||++|+   ||..|+||++++||||||+|||+|+.||++|++.+. +|++++  |+++|++.+.         ++.+++
T Consensus       306 ~aDvfV~---pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~~---------~~~~~~  372 (405)
T PRK10125        306 QMDALVF---SSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTVSEEEVLQLAQLSK---------PEIAQA  372 (405)
T ss_pred             hCCEEEE---CCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEECCCCHHHHHhccC---------HHHHHH
Confidence            9999999   788999999999999999999999999999999765 899996  7999998543         222222


Q ss_pred             ----HHHHHHHhc-cccchHHHHHHHHH
Q 011979          439 ----LRNGTLEMG-LSARWATEWEEHAK  461 (473)
Q Consensus       439 ----~~~~~~~~~-~~~~w~~~~~~~~~  461 (473)
                          +.+.+++.. +.|+|+...+++.+
T Consensus       373 ~~~~~~~~~r~~~~~~fs~~~~~~~y~~  400 (405)
T PRK10125        373 VFGTTLAEFSQRSRAAYSGQQMLEEYVN  400 (405)
T ss_pred             hhhhHHHHHHHHHHHhCCHHHHHHHHHH
Confidence                122344332 57999888888654

>PLN02501 digalactosyldiacylglycerol synthase

Probab=99.96  E-value=1.3e-26  Score=247.47  Aligned_cols=350  Identities=11%  Similarity=0.076  Sum_probs=229.3

Q ss_pred             CCeEEEEEecCC----CCChhHHHHHHHHHhhCCCcEEEEecCCCCCCccccc--------------------------C
Q 011979            4 RGRACVVVLGDL----GRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILE--------------------------H   53 (473)
Q Consensus         4 ~~~~~i~~~~~~----g~s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~--------------------------~   53 (473)
                      .+.+.|+.+..+    |.+---...|..|++..+++|+++-+--....++...                          .
T Consensus       322 ~r~~~ivTtAslPWmTGtavnpL~rAayLa~~~~~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ir~wl~~r~g~~  401 (794)
T PLN02501        322 KRHVAIVTTASLPWMTGTAVNPLFRAAYLAKSAKQNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESYIRNWLEERIGFK  401 (794)
T ss_pred             CCeEEEEEcccCcccccccccHHHHHHHhcccCCceEEEEEecCCccccccccCCCcccCCHHHHHHHHHHHHHHhcCCC
Confidence            355777777543    5666666778888886578999988442211111111                          2


Q ss_pred             CCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEE
Q 011979           54 PSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVD  133 (473)
Q Consensus        54 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~  133 (473)
                      .+..+..+|....  ...+. ....-.+.+.+            ...+||+||+.+|..+.....+..++...+ |+|..
T Consensus       402 ~~~~i~fYpg~~~--~~~~S-I~p~gdI~~~L------------~~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVas  465 (794)
T PLN02501        402 ADFKISFYPGKFS--KERRS-IIPAGDTSQFI------------PSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGV  465 (794)
T ss_pred             CCceEEeecchhc--cCCcc-ccchHHHHHHh------------hccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEE
Confidence            3444444442110  00111 11111222222            237899999999865433211444555555 89989


Q ss_pred             ecCchhhhhhhhcCCCchHHH-HHHHHHHHHhhc-CCEEEEcCHHHHHHHHHHhCCceEEeeCC-CCCCcccCChhHHHH
Q 011979          134 WHNFGYTLLSLSLGRRSHFVS-IYRWIEKYYGKM-ANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHE  210 (473)
Q Consensus       134 ~h~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~-ad~vi~vS~~~~~~l~~~~g~~~~vi~n~-~~~~f~~~~~~~~~~  210 (473)
                      +|.....+... . ....+.. +.+++.+++.+. +|.++++|..+++ +.    .......+| ++++|+|.....   
T Consensus       466 yHTny~eYl~~-y-~~g~L~~~llk~l~~~v~r~hcD~VIaPS~atq~-L~----~~vI~nVnGVDte~F~P~~r~~---  535 (794)
T PLN02501        466 VHTNYLEYIKR-E-KNGALQAFFVKHINNWVTRAYCHKVLRLSAATQD-LP----KSVICNVHGVNPKFLKIGEKVA---  535 (794)
T ss_pred             EeCCcHHHHhH-h-cchhHHHHHHHHHHHHHHHhhCCEEEcCCHHHHH-hc----ccceeecccccccccCCcchhH---
Confidence            99874332221 1 2223332 233444444443 8999999988883 32    111111257 557887764311   


Q ss_pred             HHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhh
Q 011979          211 LFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAI  290 (473)
Q Consensus       211 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~  290 (473)
                      -+..++                                    .....+ .++|+||+.+.||++.|++|+..+.+     
T Consensus       536 ~~r~lg------------------------------------i~~~~k-giLfVGRLa~EKGld~LLeAla~L~~-----  573 (794)
T PLN02501        536 EERELG------------------------------------QQAFSK-GAYFLGKMVWAKGYRELIDLLAKHKN-----  573 (794)
T ss_pred             HHHhcC------------------------------------CccccC-ceEEEEcccccCCHHHHHHHHHHHHh-----
Confidence            112222                                    111112 58899999999999999999999876     


Q ss_pred             hccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEecc
Q 011979          291 LNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHT  370 (473)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~  370 (473)
                                            ..|+++|+|+|+||..+.++++++++++ +|.|+|+   .++...+|+.+|++|+   
T Consensus       574 ----------------------~~pnvrLvIVGDGP~reeLe~la~eLgL-~V~FLG~---~dd~~~lyasaDVFVl---  624 (794)
T PLN02501        574 ----------------------ELDGFNLDVFGNGEDAHEVQRAAKRLDL-NLNFLKG---RDHADDSLHGYKVFIN---  624 (794)
T ss_pred             ----------------------hCCCeEEEEEcCCccHHHHHHHHHHcCC-EEEecCC---CCCHHHHHHhCCEEEE---
Confidence                                  2578999999999999999999999987 5899998   6778899999999999   


Q ss_pred             CCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcccc
Q 011979          371 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSA  450 (473)
Q Consensus       371 ~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~  450 (473)
                      ||..|+||++++||||||+|||+++.++.. ++.++.+|++++|.++++++|.+++.+    +..+..+++     ...+
T Consensus       625 PS~sEgFGlVlLEAMA~GlPVVATd~pG~e-~V~~g~nGll~~D~EafAeAI~~LLsd----~~~rl~~~a-----~~~~  694 (794)
T PLN02501        625 PSISDVLCTATAEALAMGKFVVCADHPSNE-FFRSFPNCLTYKTSEDFVAKVKEALAN----EPQPLTPEQ-----RYNL  694 (794)
T ss_pred             CCCcccchHHHHHHHHcCCCEEEecCCCCc-eEeecCCeEecCCHHHHHHHHHHHHhC----chhhhHHHH-----HhhC
Confidence            788999999999999999999999998854 477888999999999999999999986    333322222     2267


Q ss_pred             chHHHHHHHH
Q 011979          451 RWATEWEEHA  460 (473)
Q Consensus       451 ~w~~~~~~~~  460 (473)
                      +|+...++.+
T Consensus       695 SWeAaadrLl  704 (794)
T PLN02501        695 SWEAATQRFM  704 (794)
T ss_pred             CHHHHHHHHH
Confidence            8876666543

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

Probab=99.96  E-value=7.7e-27  Score=239.27  Aligned_cols=267  Identities=18%  Similarity=0.300  Sum_probs=208.9

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH  179 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~  179 (473)
                      .++|+++++.+.....    .+.......+.++.+|+.......  ......+...++..... .+.+|.++++|+..++
T Consensus        98 ~~~diii~~~~~~~~~----~~~~~~~~~~~i~~~h~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~d~ii~~s~~~~~  170 (372)
T cd04949          98 TKPDVFILDRPTLDGQ----ALLNMKKAAKVVVVLHSNHVSDNN--DPVHSLINNFYEYVFEN-LDKVDGVIVATEQQKQ  170 (372)
T ss_pred             CCCCEEEECCccccch----hHHhccCCceEEEEEChHHhCCcc--cccccccchhhHHHHhC-hhhCCEEEEccHHHHH
Confidence            7899999988654332    123334556788899976421110  00012222333333222 3578999999999999


Q ss_pred             HHHHHhCCc--eEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCC
Q 011979          180 ELAQNWGIK--ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN  256 (473)
Q Consensus       180 ~l~~~~g~~--~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (473)
                      .+.+.++..  +.++|++.. ..+.+..                                                ....
T Consensus       171 ~l~~~~~~~~~v~~ip~g~~~~~~~~~~------------------------------------------------~~~~  202 (372)
T cd04949         171 DLQKQFGNYNPIYTIPVGSIDPLKLPAQ------------------------------------------------FKQR  202 (372)
T ss_pred             HHHHHhCCCCceEEEcccccChhhcccc------------------------------------------------hhhc
Confidence            998877654  678888844 2222210                                                0111


Q ss_pred             CCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHHH
Q 011979          257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR  336 (473)
Q Consensus       257 ~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~  336 (473)
                      .+..++++|++.+.||++.+++|+..+.++                           .|+++|+|+|.|+....+++.++
T Consensus       203 ~~~~i~~vgrl~~~K~~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~~~~~~~~~~~  255 (372)
T cd04949         203 KPHKIITVARLAPEKQLDQLIKAFAKVVKQ---------------------------VPDATLDIYGYGDEEEKLKELIE  255 (372)
T ss_pred             CCCeEEEEEccCcccCHHHHHHHHHHHHHh---------------------------CCCcEEEEEEeCchHHHHHHHHH
Confidence            233899999999999999999999999873                           78999999999998888999999


Q ss_pred             HcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC-ccccceecCCceEEeC-
Q 011979          337 RLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVDKNGLLFS-  413 (473)
Q Consensus       337 ~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~-~~~e~i~~~~~G~~~~-  413 (473)
                      ++++ ++|.|.|+   .+++..+|+.||++|+   +|..|++|++++|||+||+|||+++.+ |..+++.++.+|++++ 
T Consensus       256 ~~~~~~~v~~~g~---~~~~~~~~~~ad~~v~---~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~  329 (372)
T cd04949         256 ELGLEDYVFLKGY---TRDLDEVYQKAQLSLL---TSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPK  329 (372)
T ss_pred             HcCCcceEEEcCC---CCCHHHHHhhhhEEEe---cccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCC
Confidence            9998 79999996   7899999999999999   688899999999999999999999976 8899999999999997 


Q ss_pred             -CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHH
Q 011979          414 -SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEE  458 (473)
Q Consensus       414 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~  458 (473)
                       |+++++++|.+++++    ++.+++|++++++..++|+|++.+++
T Consensus       330 ~d~~~la~~i~~ll~~----~~~~~~~~~~a~~~~~~~s~~~~~~~  371 (372)
T cd04949         330 GDIEALAEAIIELLND----PKLLQKFSEAAYENAERYSEENVWEK  371 (372)
T ss_pred             CcHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHhhHHHHHhc
Confidence             899999999999995    88999999999998888999887764

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra

>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]

Probab=99.95  E-value=1.1e-26  Score=228.41  Aligned_cols=329  Identities=17%  Similarity=0.193  Sum_probs=227.5

Q ss_pred             HHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCC---cchhHHHHHHHHHHHHHHHHHHHHhhhhCCC
Q 011979           26 LSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGL---PKVLKPVLLLLKPLIQFFMLLWFLCVKIASP  102 (473)
Q Consensus        26 ~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (473)
                      ..|-+ +||.|.+++........-.....|++++.++...  ..+-   +.....+..+...+           .+ .+.
T Consensus        26 q~li~-lghkVvvithayg~r~girylt~glkVyylp~~v--~~n~tT~ptv~~~~Pllr~i~-----------lr-E~I   90 (426)
T KOG1111|consen   26 QCLIR-LGHKVVVITHAYGNRVGIRYLTNGLKVYYLPAVV--GYNQTTFPTVFSDFPLLRPIL-----------LR-ERI   90 (426)
T ss_pred             cchhh-cCCeEEEEeccccCccceeeecCCceEEEEeeee--eecccchhhhhccCcccchhh-----------hh-hce
Confidence            44445 5999999995533221112234578888888321  1111   11111122222222           12 578


Q ss_pred             CEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHH
Q 011979          103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELA  182 (473)
Q Consensus       103 Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~  182 (473)
                      .+||.|++.+...- -+...++..+.+.+++-|.+ |     .+..-+  ......+-++.....|.+||+|-..++...
T Consensus        91 ~ivhghs~fS~lah-e~l~hartMGlktVfTdHSl-f-----Gfad~~--si~~n~ll~~sL~~id~~IcVshtskentv  161 (426)
T KOG1111|consen   91 EIVHGHSPFSYLAH-EALMHARTMGLKTVFTDHSL-F-----GFADIG--SILTNKLLPLSLANIDRIICVSHTSKENTV  161 (426)
T ss_pred             EEEecCChHHHHHH-HHHHHHHhcCceEEEecccc-c-----cccchh--hhhhcceeeeeecCCCcEEEEeecCCCceE
Confidence            88888886544332 24445556789999999987 2     111111  111112233344567999999987765432


Q ss_pred             HHhCC---ceEEeeCC-CCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCC
Q 011979          183 QNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRP  258 (473)
Q Consensus       183 ~~~g~---~~~vi~n~-~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (473)
                      -+...   ++.+|||. ..+.|.|.+..                                               .++.+
T Consensus       162 lr~~L~p~kvsvIPnAv~~~~f~P~~~~-----------------------------------------------~~S~~  194 (426)
T KOG1111|consen  162 LRGALAPAKVSVIPNAVVTHTFTPDAAD-----------------------------------------------KPSAD  194 (426)
T ss_pred             EEeccCHhHeeeccceeeccccccCccc-----------------------------------------------cCCCC
Confidence            11122   27899998 55778775321                                               11122


Q ss_pred             -eEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHHHH
Q 011979          259 -ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR  337 (473)
Q Consensus       259 -~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~~  337 (473)
                       ..++.++|+..+||+|.|++++..+.+                           +.|+++|+|+|+||.+..+++..++
T Consensus       195 i~~ivv~sRLvyrKGiDll~~iIp~vc~---------------------------~~p~vrfii~GDGPk~i~lee~lEk  247 (426)
T KOG1111|consen  195 IITIVVASRLVYRKGIDLLLEIIPSVCD---------------------------KHPEVRFIIIGDGPKRIDLEEMLEK  247 (426)
T ss_pred             eeEEEEEeeeeeccchHHHHHHHHHHHh---------------------------cCCCeeEEEecCCcccchHHHHHHH
Confidence             488999999999999999999999998                           5899999999999999999999999


Q ss_pred             cCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC-CH
Q 011979          338 LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS-SS  415 (473)
Q Consensus       338 ~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~-~~  415 (473)
                      +.+ ++|.++|. ++++++.+.|.+-|++++   +|..|.|+++++|||+||+||+++.+||++|++-++ .-+..+ ++
T Consensus       248 ~~l~~rV~~lG~-v~h~~Vr~vl~~G~IFln---tSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~i~~~~~~~  322 (426)
T KOG1111|consen  248 LFLQDRVVMLGT-VPHDRVRDVLVRGDIFLN---TSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED-MITLGEPGP  322 (426)
T ss_pred             hhccCceEEecc-cchHHHHHHHhcCcEEec---cHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc-ceeccCCCh
Confidence            999 89999999 999999999999999999   899999999999999999999999999999998554 222333 68


Q ss_pred             HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHH
Q 011979          416 SELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL  463 (473)
Q Consensus       416 ~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  463 (473)
                      +++++++++.+......|   ..+.++..+   .|+|.+..+++-+..
T Consensus       323 ~dl~~~v~~ai~~~~~~p---~~~h~~v~~---~y~w~dVa~rTekvy  364 (426)
T KOG1111|consen  323 DDLVGAVEKAITKLRTLP---LEFHDRVKK---MYSWKDVAERTEKVY  364 (426)
T ss_pred             HHHHHHHHHHHHHhccCc---hhHHHHHHH---hccHHHHHHHHHHHH
Confidence            999999988887533222   233344444   699999988865443

>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.95  E-value=1.1e-24  Score=224.85  Aligned_cols=359  Identities=17%  Similarity=0.132  Sum_probs=217.4

Q ss_pred             CCCCCeEEEEEecCCC-CChhHHHHHHHHHhhCCCcEEEEecCCC--CCCcccccCCCEEEEEe-ecCCCCCCCC--cch
Q 011979            1 MGRRGRACVVVLGDLG-RSPRMQYQALSLARQMSLEVDVVAYGGS--KPHAAILEHPSIHIHTM-TQWPTIPRGL--PKV   74 (473)
Q Consensus         1 m~~~~~~~i~~~~~~g-~s~r~~~~a~~L~~~~g~eV~vi~~~~~--~~~~~~~~~~~i~i~~~-~~~~~~~~~~--~~~   74 (473)
                      |.+.+.++++...+|+ ...|-|..+..|+++ ||.|..+...+.  .+..  ...+...+..- ..........  .-.
T Consensus         1 ~~~~~~~~~~~~~~w~~~~~~~qhl~~~~a~~-~~~vl~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (373)
T cd04950           1 MADRPDILVFSADDWDFLWQRPQHLAARLAER-GNRVLYVEPPGLSRTPQP--RGRDWVRVVLRLRAALRRPRRLDPLIP   77 (373)
T ss_pred             CCCCCeEEEecccCcCCCCCCHHHHHHHHHhC-CCeEEEEeCCCccCCCCC--CCcccEEeeecccccccCccccCcccc
Confidence            5556656655566776 478899999999976 999999986543  2221  22233333221 1000000000  000


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHH
Q 011979           75 LKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVS  154 (473)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~  154 (473)
                      ..........+...  +.+... +....|.|+..++|....     ++....+.++||+++|.+....    +....   
T Consensus        78 ~~~~~~~~~~~~~~--~~~~~~-~~~~~~~i~~~~~P~~~~-----~~~~~~~~~~Vyd~~D~~~~~~----~~~~~---  142 (373)
T cd04950          78 ARRRRLLRLLLNAL--LFWAQL-ELGFGRPILWYYTPYTLP-----VAALLQASLVVYDCVDDLSAFP----GGPPE---  142 (373)
T ss_pred             chhhhHHHHHHHHH--HHHHHH-hcCCCCcEEEEeCccHHH-----HHhhcCCCeEEEEcccchhccC----CCCHH---
Confidence            01111111111110  111111 224445555444443322     2233677899999999743211    11111   


Q ss_pred             HHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCc
Q 011979          155 IYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGM  233 (473)
Q Consensus       155 ~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  233 (473)
                       ....|+.+.+.||.|+++|+.+++.+.+ ++.++.+++||.+ +.|.+....... . ..+                  
T Consensus       143 -~~~~e~~~~~~ad~vi~~S~~l~~~~~~-~~~~i~~i~ngvd~~~f~~~~~~~~~-~-~~~------------------  200 (373)
T cd04950         143 -LLEAERRLLKRADLVFTTSPSLYEAKRR-LNPNVVLVPNGVDYEHFAAARDPPPP-P-ADL------------------  200 (373)
T ss_pred             -HHHHHHHHHHhCCEEEECCHHHHHHHhh-CCCCEEEcccccCHHHhhcccccCCC-h-hHH------------------
Confidence             1267888899999999999999988876 4667899999954 556443211000 0 000                  


Q ss_pred             CCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCcccc
Q 011979          234 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL  313 (473)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (473)
                                         ...+++ .++|+|++.+.++++.+.++++.                               
T Consensus       201 -------------------~~~~~~-~i~y~G~l~~~~d~~ll~~la~~-------------------------------  229 (373)
T cd04950         201 -------------------AALPRP-VIGYYGAIAEWLDLELLEALAKA-------------------------------  229 (373)
T ss_pred             -------------------hcCCCC-EEEEEeccccccCHHHHHHHHHH-------------------------------
Confidence                               112233 89999999998888766554432                               


Q ss_pred             CCCEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCC--CCCCCcHHHHHHHhcCCcE
Q 011979          314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS--SGLDLPMKVVDMFGCGLPV  391 (473)
Q Consensus       314 ~~~~~l~ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s--~~e~~p~kv~Eama~G~Pv  391 (473)
                      .|+++|+|+|.|+.....   ....+.+||+|+|. ++.++++.+++.+|++++|...+  ...++|+|++||||||+||
T Consensus       230 ~p~~~~vliG~~~~~~~~---~~~~~~~nV~~~G~-~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PV  305 (373)
T cd04950         230 RPDWSFVLIGPVDVSIDP---SALLRLPNVHYLGP-KPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPV  305 (373)
T ss_pred             CCCCEEEEECCCcCccCh---hHhccCCCEEEeCC-CCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCE
Confidence            478999999998332222   22223479999998 99999999999999999976554  3457899999999999999


Q ss_pred             EEeccCccccceecCCceEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHH
Q 011979          392 CAVSYSCIEELVKVDKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL  463 (473)
Q Consensus       392 I~~~~~~~~e~i~~~~~G~~~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  463 (473)
                      |+++.++.   +.....+++.. |+++++++|.+++.+.  ++....+..+    ..++++|++..++....+
T Consensus       306 Vat~~~~~---~~~~~~~~~~~~d~~~~~~ai~~~l~~~--~~~~~~~~~~----~~~~~sW~~~a~~~~~~l  369 (373)
T cd04950         306 VATPLPEV---RRYEDEVVLIADDPEEFVAAIEKALLED--GPARERRRLR----LAAQNSWDARAAEMLEAL  369 (373)
T ss_pred             EecCcHHH---HhhcCcEEEeCCCHHHHHHHHHHHHhcC--CchHHHHHHH----HHHHCCHHHHHHHHHHHH
Confidence            99986544   33444455554 7999999999976541  1222222111    344789988888766444

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>PHA01630 putative group 1 glycosyl transferase

Probab=99.94  E-value=7.4e-25  Score=222.84  Aligned_cols=233  Identities=11%  Similarity=0.099  Sum_probs=176.3

Q ss_pred             CCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHH-hhcCCEEEEcCHHHHHHHHHHh-CC--ceEEeeCCCC-CCc
Q 011979          126 RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY-GKMANGCLCVTQAMQHELAQNW-GI--KATVLYDQPP-EFF  200 (473)
Q Consensus       126 ~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~ad~vi~vS~~~~~~l~~~~-g~--~~~vi~n~~~-~~f  200 (473)
                      .+.|+++++|+. +              ++.+.++.++ .+.+|.++++|+.+++.+.+.. +.  ++.++|||.+ +.|
T Consensus        68 ~~~~~v~e~~~~-~--------------~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f  132 (331)
T PHA01630         68 VGKNIVFEVADT-D--------------AISHTALYFFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMF  132 (331)
T ss_pred             cCCceEEEEEee-c--------------hhhHHHHHHHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHc
Confidence            467999999984 1              2223455666 6789999999999999997652 22  5789999944 455


Q ss_pred             ccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHH
Q 011979          201 HPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAA  280 (473)
Q Consensus       201 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~  280 (473)
                      .+...                                                ....+.+++++|++.++||++.|++|+
T Consensus       133 ~~~~~------------------------------------------------~~~~~~vl~~~g~~~~~Kg~d~Li~A~  164 (331)
T PHA01630        133 EYKPK------------------------------------------------EKPHPCVLAILPHSWDRKGGDIVVKIF  164 (331)
T ss_pred             CCCcc------------------------------------------------ccCCCEEEEEeccccccCCHHHHHHHH
Confidence            43310                                                011344777888999999999999999


Q ss_pred             HHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHh
Q 011979          281 LMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG  360 (473)
Q Consensus       281 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~  360 (473)
                      +.+.++                           .++++++++|+++....+      .++..  +.|+ ++.+++..+|+
T Consensus       165 ~~l~~~---------------------------~~~~~llivG~~~~~~~l------~~~~~--~~~~-v~~~~l~~~y~  208 (331)
T PHA01630        165 HELQNE---------------------------GYDFYFLIKSSNMLDPRL------FGLNG--VKTP-LPDDDIYSLFA  208 (331)
T ss_pred             HHHHhh---------------------------CCCEEEEEEeCcccchhh------ccccc--eecc-CCHHHHHHHHH
Confidence            998772                           578999999977543321      12222  3455 88999999999


Q ss_pred             cCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEe--------------------C-CHHHHH
Q 011979          361 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--------------------S-SSSELA  419 (473)
Q Consensus       361 ~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~--------------------~-~~~~la  419 (473)
                      .||++|+   ||..|+||++++||||||+|||+|+.+|..|++.++.+|+++                    + |.++++
T Consensus       209 ~aDv~v~---pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~~  285 (331)
T PHA01630        209 GCDILFY---PVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDAY  285 (331)
T ss_pred             hCCEEEE---CCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCCCHHHHH
Confidence            9999999   788899999999999999999999999999999998776664                    3 678899


Q ss_pred             HHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHH
Q 011979          420 DQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAK  461 (473)
Q Consensus       420 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~  461 (473)
                      +++.+++.+.. +++.++.++++++...++|+|+...++..+
T Consensus       286 ~~ii~~l~~~~-~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~  326 (331)
T PHA01630        286 QKLLEALANWT-PEKKKENLEGRAILYRENYSYNAIAKMWEK  326 (331)
T ss_pred             HHHHHHHhCCC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            99999888511 145666777777777789999877666433

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=99.93  E-value=1.4e-23  Score=214.74  Aligned_cols=328  Identities=17%  Similarity=0.148  Sum_probs=212.2

Q ss_pred             CeEEEEEecCCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHH
Q 011979            5 GRACVVVLGDLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLK   83 (473)
Q Consensus         5 ~~~~i~~~~~~g~s~r-~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~   83 (473)
                      ++++++..| .|+..+ +...+..|.++ ||+|++++...+. .....+..++++++++...  ..+.. ....+....+
T Consensus         2 ~~i~i~~~g-~gG~~~~~~~la~~L~~~-g~ev~vv~~~~~~-~~~~~~~~g~~~~~~~~~~--~~~~~-~~~~l~~~~~   75 (357)
T PRK00726          2 KKILLAGGG-TGGHVFPALALAEELKKR-GWEVLYLGTARGM-EARLVPKAGIEFHFIPSGG--LRRKG-SLANLKAPFK   75 (357)
T ss_pred             cEEEEEcCc-chHhhhHHHHHHHHHHhC-CCEEEEEECCCch-hhhccccCCCcEEEEeccC--cCCCC-hHHHHHHHHH
Confidence            456666555 355444 34667777776 9999999975432 1223334689999888321  11111 1111111212


Q ss_pred             HHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHH
Q 011979           84 PLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY  163 (473)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~  163 (473)
                      .++... -++.++ +..+||+||++++..  . ..+.++++..++|+|++.|+...          .       ..+++.
T Consensus        76 ~~~~~~-~~~~~i-k~~~pDvv~~~~~~~--~-~~~~~~~~~~~~p~v~~~~~~~~----------~-------~~~r~~  133 (357)
T PRK00726         76 LLKGVL-QARKIL-KRFKPDVVVGFGGYV--S-GPGGLAARLLGIPLVIHEQNAVP----------G-------LANKLL  133 (357)
T ss_pred             HHHHHH-HHHHHH-HhcCCCEEEECCCcc--h-hHHHHHHHHcCCCEEEEcCCCCc----------c-------HHHHHH
Confidence            222111 122233 337899999998422  2 23556677788999987765411          0       234556


Q ss_pred             hhcCCEEEEcCHHHHHHHHHHhCCceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchh
Q 011979          164 GKMANGCLCVTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETI  242 (473)
Q Consensus       164 ~~~ad~vi~vS~~~~~~l~~~~g~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (473)
                      .+.+|.+++.++...   .+..+.++.+++|+.. +.+.+..  .+    .++                           
T Consensus       134 ~~~~d~ii~~~~~~~---~~~~~~~i~vi~n~v~~~~~~~~~--~~----~~~---------------------------  177 (357)
T PRK00726        134 ARFAKKVATAFPGAF---PEFFKPKAVVTGNPVREEILALAA--PP----ARL---------------------------  177 (357)
T ss_pred             HHHhchheECchhhh---hccCCCCEEEECCCCChHhhcccc--hh----hhc---------------------------
Confidence            678999999988543   2233456899999844 3333211  10    011                           


Q ss_pred             hhcccccccccCCCCCeEEEEEeeccCCCCHHHHH-HHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEE
Q 011979          243 FTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILL-EAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII  321 (473)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li-~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i  321 (473)
                               ..+++.+ +++++|+....++...++ +|++.+.+                            .+ ..+++
T Consensus       178 ---------~~~~~~~-~i~~~gg~~~~~~~~~~l~~a~~~~~~----------------------------~~-~~~~~  218 (357)
T PRK00726        178 ---------AGREGKP-TLLVVGGSQGARVLNEAVPEALALLPE----------------------------AL-QVIHQ  218 (357)
T ss_pred             ---------cCCCCCe-EEEEECCcHhHHHHHHHHHHHHHHhhh----------------------------Cc-EEEEE
Confidence                     1223333 677777777777765555 88888754                            23 56788


Q ss_pred             EcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc---
Q 011979          322 TGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC---  398 (473)
Q Consensus       322 vG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~---  398 (473)
                      +|+|+. +.+++..+ +++. |.+.|+   .++++.+|..||++++   ++ +   +++++|||++|+|+|++..++   
T Consensus       219 ~G~g~~-~~~~~~~~-~~~~-v~~~g~---~~~~~~~~~~~d~~i~---~~-g---~~~~~Ea~~~g~Pvv~~~~~~~~~  285 (357)
T PRK00726        219 TGKGDL-EEVRAAYA-AGIN-AEVVPF---IDDMAAAYAAADLVIC---RA-G---ASTVAELAAAGLPAILVPLPHAAD  285 (357)
T ss_pred             cCCCcH-HHHHHHhh-cCCc-EEEeeh---HhhHHHHHHhCCEEEE---CC-C---HHHHHHHHHhCCCEEEecCCCCCc
Confidence            999975 45555556 7765 999998   4899999999999998   33 2   579999999999999987532   


Q ss_pred             -----cccceecCCceEEeC--C--HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccch
Q 011979          399 -----IEELVKVDKNGLLFS--S--SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARW  452 (473)
Q Consensus       399 -----~~e~i~~~~~G~~~~--~--~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w  452 (473)
                           ..+.+.+.++|++++  |  +++++++|.+++++    ++.+++|++++++....+.-
T Consensus       286 ~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~~~~~~  344 (357)
T PRK00726        286 DHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD----PERLEAMAEAARALGKPDAA  344 (357)
T ss_pred             CcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC----HHHHHHHHHHHHhcCCcCHH
Confidence                 235677788999985  4  89999999999995    89999999999987755543

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

Probab=99.93  E-value=1.8e-23  Score=212.52  Aligned_cols=325  Identities=19%  Similarity=0.154  Sum_probs=208.6

Q ss_pred             EEEEEecCCCC-ChhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHH
Q 011979            7 ACVVVLGDLGR-SPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPL   85 (473)
Q Consensus         7 ~~i~~~~~~g~-s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (473)
                      +++...+ .|+ ..+....+..|.++ ||+|+++|....... ......+++++.++.......  .. ...+......+
T Consensus         2 ~~~~~~~-~gG~~~~~~~la~~l~~~-G~ev~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~   75 (350)
T cd03785           2 ILIAGGG-TGGHIFPALALAEELRER-GAEVLFLGTKRGLEA-RLVPKAGIPLHTIPVGGLRRK--GS-LKKLKAPFKLL   75 (350)
T ss_pred             EEEEecC-chhhhhHHHHHHHHHHhC-CCEEEEEECCCcchh-hcccccCCceEEEEecCcCCC--Ch-HHHHHHHHHHH
Confidence            3434333 444 33444777888887 999999987643221 222345788888873211111  11 11111111111


Q ss_pred             HHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhh
Q 011979           86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK  165 (473)
Q Consensus        86 ~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  165 (473)
                      +.... +..++ +..+||+||++++..  .. .+.++++..++|+++..|+...          .       ..+++.++
T Consensus        76 ~~~~~-~~~~i-~~~~pDvI~~~~~~~--~~-~~~~~a~~~~~p~v~~~~~~~~----------~-------~~~~~~~~  133 (350)
T cd03785          76 KGVLQ-ARKIL-KKFKPDVVVGFGGYV--SG-PVGLAAKLLGIPLVIHEQNAVP----------G-------LANRLLAR  133 (350)
T ss_pred             HHHHH-HHHHH-HhcCCCEEEECCCCc--ch-HHHHHHHHhCCCEEEEcCCCCc----------c-------HHHHHHHH
Confidence            11111 11222 337899999988533  22 3456677788999886655410          0       23455667


Q ss_pred             cCCEEEEcCHHHHHHHHHHhCCceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhh
Q 011979          166 MANGCLCVTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFT  244 (473)
Q Consensus       166 ~ad~vi~vS~~~~~~l~~~~g~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (473)
                      .+|.++++|+.++++   ..+.++.+++|+.. +.+.+..  .    +.+++                            
T Consensus       134 ~~~~vi~~s~~~~~~---~~~~~~~~i~n~v~~~~~~~~~--~----~~~~~----------------------------  176 (350)
T cd03785         134 FADRVALSFPETAKY---FPKDKAVVTGNPVREEILALDR--E----RARLG----------------------------  176 (350)
T ss_pred             hhCEEEEcchhhhhc---CCCCcEEEECCCCchHHhhhhh--h----HHhcC----------------------------
Confidence            799999999998876   22445788888844 3333211  1    22221                            


Q ss_pred             cccccccccCCCCCeEEEEEeeccCCCCHH-HHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEE-EEEE
Q 011979          245 SLAGIDVFLKPNRPALVVSSTSWTPDEDFG-ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIIT  322 (473)
Q Consensus       245 ~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~-~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~iv  322 (473)
                              .+++.+ ++++.|+....|+.. .+++|+..+.+                             +++. ++++
T Consensus       177 --------~~~~~~-~i~~~~g~~~~~~~~~~l~~a~~~l~~-----------------------------~~~~~~~i~  218 (350)
T cd03785         177 --------LRPGKP-TLLVFGGSQGARAINEAVPEALAELLR-----------------------------KRLQVIHQT  218 (350)
T ss_pred             --------CCCCCe-EEEEECCcHhHHHHHHHHHHHHHHhhc-----------------------------cCeEEEEEc
Confidence                    233444 555555544555654 45588877753                             3455 5578


Q ss_pred             cCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc----
Q 011979          323 GKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----  398 (473)
Q Consensus       323 G~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~----  398 (473)
                      |.| +.+++++.++++ .++|.+.|+   .+++..+|+.||++|+   ++ +   +++++|||++|+|||+++.++    
T Consensus       219 G~g-~~~~l~~~~~~~-~~~v~~~g~---~~~~~~~l~~ad~~v~---~s-g---~~t~~Eam~~G~Pvv~~~~~~~~~~  286 (350)
T cd03785         219 GKG-DLEEVKKAYEEL-GVNYEVFPF---IDDMAAAYAAADLVIS---RA-G---ASTVAELAALGLPAILIPLPYAADD  286 (350)
T ss_pred             CCc-cHHHHHHHHhcc-CCCeEEeeh---hhhHHHHHHhcCEEEE---CC-C---HhHHHHHHHhCCCEEEeecCCCCCC
Confidence            888 567788888776 468999998   4899999999999997   33 2   579999999999999987543    


Q ss_pred             ----cccceecCCceEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcccc
Q 011979          399 ----IEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSA  450 (473)
Q Consensus       399 ----~~e~i~~~~~G~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~  450 (473)
                          ..+.+.+.++|++++    |+++++++|..++++    ++.+++|++++++....+
T Consensus       287 ~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~~~~  342 (350)
T cd03785         287 HQTANARALVKAGAAVLIPQEELTPERLAAALLELLSD----PERLKAMAEAARSLARPD  342 (350)
T ss_pred             cHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC----HHHHHHHHHHHHhcCCCC
Confidence                245666778999986    699999999999974    889999999999876444

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=99.92  E-value=6.9e-23  Score=208.13  Aligned_cols=324  Identities=15%  Similarity=0.161  Sum_probs=202.8

Q ss_pred             eEEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHH
Q 011979            6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPL   85 (473)
Q Consensus         6 ~~~i~~~~~~g~s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (473)
                      +++++..|.-|+..+...++..|.++ ||+|+++|..+.. .....+..++++++++.......+.   ...+......+
T Consensus         2 ~i~~~~g~~~g~~~~~~~La~~L~~~-g~eV~vv~~~~~~-~~~~~~~~g~~~~~i~~~~~~~~~~---~~~l~~~~~~~   76 (348)
T TIGR01133         2 KVVLAAGGTGGHIFPALAVAEELIKR-GVEVLWLGTKRGL-EKRLVPKAGIEFYFIPVGGLRRKGS---FRLIKTPLKLL   76 (348)
T ss_pred             eEEEEeCccHHHHhHHHHHHHHHHhC-CCEEEEEeCCCcc-hhcccccCCCceEEEeccCcCCCCh---HHHHHHHHHHH
Confidence            45655555434444334677888886 9999999864322 1123334688888887322111111   11111111111


Q ss_pred             HHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhh
Q 011979           86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK  165 (473)
Q Consensus        86 ~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  165 (473)
                      .... -+..++ +..+||+||++.+.  +.. .+.++++..++|+++..++..         .        .+.++++.+
T Consensus        77 ~~~~-~l~~~i-~~~~pDvVi~~~~~--~~~-~~~~~~~~~~~p~v~~~~~~~---------~--------~~~~~~~~~  134 (348)
T TIGR01133        77 KAVF-QARRIL-KKFKPDAVIGFGGY--VSG-PAGLAAKLLGIPLFHHEQNAV---------P--------GLTNKLLSR  134 (348)
T ss_pred             HHHH-HHHHHH-HhcCCCEEEEcCCc--ccH-HHHHHHHHcCCCEEEECCCCC---------c--------cHHHHHHHH
Confidence            1111 111222 34789999998743  222 345566677889886544331         1        123556667


Q ss_pred             cCCEEEEcCHHHHHHHHHHhCCceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhh
Q 011979          166 MANGCLCVTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFT  244 (473)
Q Consensus       166 ~ad~vi~vS~~~~~~l~~~~g~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (473)
                      .+|.++++|+.+++++      +..+++|+.. ..+.+..  .+.    .++                            
T Consensus       135 ~~d~ii~~~~~~~~~~------~~~~i~n~v~~~~~~~~~--~~~----~~~----------------------------  174 (348)
T TIGR01133       135 FAKKVLISFPGAKDHF------EAVLVGNPVRQEIRSLPV--PRE----RFG----------------------------  174 (348)
T ss_pred             HhCeeEECchhHhhcC------CceEEcCCcCHHHhcccc--hhh----hcC----------------------------
Confidence            8999999999888665      2367888744 2222211  111    111                            


Q ss_pred             cccccccccCCCCCeEEEEEeeccCCCCHHH-HHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEE-EEE
Q 011979          245 SLAGIDVFLKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IIT  322 (473)
Q Consensus       245 ~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~iv  322 (473)
                              ++++.+ +++++|+....|+... +++|++.+.+                             +++++ +++
T Consensus       175 --------~~~~~~-~i~~~gg~~~~~~~~~~l~~a~~~l~~-----------------------------~~~~~~~~~  216 (348)
T TIGR01133       175 --------LREGKP-TILVLGGSQGAKILNELVPKALAKLAE-----------------------------KGIQIVHQT  216 (348)
T ss_pred             --------CCCCCe-EEEEECCchhHHHHHHHHHHHHHHHhh-----------------------------cCcEEEEEC
Confidence                    233344 7778877666777654 5578877754                             23455 444


Q ss_pred             cCCCChHHHHHHHHHcCCCc-EEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc---
Q 011979          323 GKGPDKESYEEKIRRLRLKR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC---  398 (473)
Q Consensus       323 G~g~~~~~l~~~~~~~~l~~-V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~---  398 (473)
                      |++ ..+.+++.++++++.+ +.|. .   . ++..+|..||++|.   ++ +   |++++|||++|+|+|+++.++   
T Consensus       217 g~~-~~~~l~~~~~~~~l~~~v~~~-~---~-~~~~~l~~ad~~v~---~~-g---~~~l~Ea~~~g~Pvv~~~~~~~~~  283 (348)
T TIGR01133       217 GKN-DLEKVKNVYQELGIEAIVTFI-D---E-NMAAAYAAADLVIS---RA-G---ASTVAELAAAGVPAILIPYPYAAD  283 (348)
T ss_pred             Ccc-hHHHHHHHHhhCCceEEecCc-c---c-CHHHHHHhCCEEEE---CC-C---hhHHHHHHHcCCCEEEeeCCCCcc
Confidence            544 4577888888888743 3343 2   3 99999999999997   33 2   679999999999999997643   


Q ss_pred             ----cccceecCCceEEeC--C--HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccc
Q 011979          399 ----IEELVKVDKNGLLFS--S--SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSAR  451 (473)
Q Consensus       399 ----~~e~i~~~~~G~~~~--~--~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  451 (473)
                          ..+++.++.+|++++  |  +++++++|.+++++    ++.+++|+++++++.+...
T Consensus       284 ~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~~~~~  340 (348)
T TIGR01133       284 DQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD----PANLEAMAEAARKLAKPDA  340 (348)
T ss_pred             chhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC----HHHHHHHHHHHHhcCCccH
Confidence                235777889999985  3  99999999999984    8999999999998764443

RL J Bacteriol 1993 Mar;175(6):1841-3

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed

Probab=99.92  E-value=3.5e-22  Score=209.63  Aligned_cols=265  Identities=16%  Similarity=0.176  Sum_probs=185.9

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH  179 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~  179 (473)
                      .+||+++++....++..   ...++..++|+++..|.+..       .. ....+.+.++.+.+.+.+|.++++|+.+++
T Consensus       123 ~~Pd~v~~~~~~~~~~~---l~~~~~~~ip~vl~~~~~~~-------~s-~~~~~~~~~~~r~~~~~~d~ii~~S~~~~~  191 (425)
T PRK05749        123 WRPKLVIIMETELWPNL---IAELKRRGIPLVLANARLSE-------RS-FKRYQKFKRFYRLLFKNIDLVLAQSEEDAE  191 (425)
T ss_pred             hCCCEEEEEecchhHHH---HHHHHHCCCCEEEEeccCCh-------hh-HHHHHHHHHHHHHHHHhCCEEEECCHHHHH
Confidence            78999998865545443   22345678998886554421       00 001123446677788889999999999999


Q ss_pred             HHHHHhCCc--eEEeeCCCCCCcccC-ChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCC
Q 011979          180 ELAQNWGIK--ATVLYDQPPEFFHPT-SLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN  256 (473)
Q Consensus       180 ~l~~~~g~~--~~vi~n~~~~~f~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (473)
                      .+.+ .|.+  +.+++|...+.+.+. .......++..++                                      ++
T Consensus       192 ~l~~-~g~~~~i~vi~n~~~d~~~~~~~~~~~~~~r~~~~--------------------------------------~~  232 (425)
T PRK05749        192 RFLA-LGAKNEVTVTGNLKFDIEVPPELAARAATLRRQLA--------------------------------------PN  232 (425)
T ss_pred             HHHH-cCCCCCcEecccccccCCCChhhHHHHHHHHHHhc--------------------------------------CC
Confidence            9987 4654  466666433322222 1122333333321                                      22


Q ss_pred             CCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh-HHHHHHH
Q 011979          257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEEKI  335 (473)
Q Consensus       257 ~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-~~l~~~~  335 (473)
                      ++ +++++|+.  .++.+.+++|+..+.+                           ..|+++|+|+|+|+.+ +++++++
T Consensus       233 ~~-vil~~~~~--~~~~~~ll~A~~~l~~---------------------------~~~~~~liivG~g~~r~~~l~~~~  282 (425)
T PRK05749        233 RP-VWIAASTH--EGEEELVLDAHRALLK---------------------------QFPNLLLILVPRHPERFKEVEELL  282 (425)
T ss_pred             Cc-EEEEeCCC--chHHHHHHHHHHHHHH---------------------------hCCCcEEEEcCCChhhHHHHHHHH
Confidence            34 66777764  5789999999999876                           2689999999999986 7899999


Q ss_pred             HHcCCCcEEEecCCCC-----------cccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc-Cccccce
Q 011979          336 RRLRLKRVAFRTMWLS-----------AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCIEELV  403 (473)
Q Consensus       336 ~~~~l~~V~~~g~~v~-----------~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~-~~~~e~i  403 (473)
                      ++++++.+.+.|...+           .+++..+|+.||+++++  +|..+++|..++||||||+|||+++. ++..+++
T Consensus       283 ~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~--~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~  360 (425)
T PRK05749        283 KKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVG--GSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIF  360 (425)
T ss_pred             HhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEEC--CCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHH
Confidence            9999866666654222           35899999999998774  55667799999999999999999863 5555554


Q ss_pred             ecC-CceEEe--CCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcccc
Q 011979          404 KVD-KNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSA  450 (473)
Q Consensus       404 ~~~-~~G~~~--~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~  450 (473)
                      ... .+|+++  .|+++++++|.+++++    ++.+++|++++++..++.
T Consensus       361 ~~~~~~g~~~~~~d~~~La~~l~~ll~~----~~~~~~m~~~a~~~~~~~  406 (425)
T PRK05749        361 ERLLQAGAAIQVEDAEDLAKAVTYLLTD----PDARQAYGEAGVAFLKQN  406 (425)
T ss_pred             HHHHHCCCeEEECCHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHhC
Confidence            331 234444  5899999999999985    999999999999977443

>PHA01633 putative glycosyl transferase group 1

Probab=99.91  E-value=4.3e-22  Score=201.71  Aligned_cols=236  Identities=14%  Similarity=0.197  Sum_probs=169.7

Q ss_pred             CCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCc-eEEeeCC-CCCCcccC
Q 011979          126 RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPT  203 (473)
Q Consensus       126 ~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g~~-~~vi~n~-~~~~f~~~  203 (473)
                      .+.+++.++|+..         ..       ....+.+.+ .+.+|++|+.+++.+.+. |.+ ..++++| +.+.|.+.
T Consensus        69 ~~~~~~tt~~g~~---------~~-------~~y~~~m~~-~~~vIavS~~t~~~L~~~-G~~~~i~I~~GVD~~~f~p~  130 (335)
T PHA01633         69 GKKYFYTTCDGIP---------NI-------EIVNKYLLQ-DVKFIPNSKFSAENLQEV-GLQVDLPVFHGINFKIVENA  130 (335)
T ss_pred             CCCceEEeeCCcC---------ch-------HHHHHHHhc-CCEEEeCCHHHHHHHHHh-CCCCceeeeCCCChhhcCcc
Confidence            3577888999882         10       122334333 568999999999999874 654 2346777 44667654


Q ss_pred             ChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHh
Q 011979          204 SLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMY  283 (473)
Q Consensus       204 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l  283 (473)
                      . ....+++++++..                                   .++ ...++++||+.++||++.|++|++.+
T Consensus       131 ~-~~~~~~r~~~~~~-----------------------------------~~~-~~~i~~vGRl~~~KG~~~LI~A~~~L  173 (335)
T PHA01633        131 E-KLVPQLKQKLDKD-----------------------------------FPD-TIKFGIVSGLTKRKNMDLMLQVFNEL  173 (335)
T ss_pred             c-hhhHHHHHHhCcC-----------------------------------CCC-CeEEEEEeCCccccCHHHHHHHHHHH
Confidence            2 1223444443310                                   112 23899999999999999999999998


Q ss_pred             HHHHHhhhccCCCchhhHHHhhhccCccccCC----CEEEEEEcCCCChHHHHHHHHHcCC-CcEEEec--CCCCcccHH
Q 011979          284 DRRVAAILNEDDSTNEEVFLKEISDGKQYLYP----RLLFIITGKGPDKESYEEKIRRLRL-KRVAFRT--MWLSAEDYP  356 (473)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~ivG~g~~~~~l~~~~~~~~l-~~V~~~g--~~v~~~~i~  356 (473)
                      .++                           .|    +++++++|.+        ..+++++ ++|.|+|  ++++.+++.
T Consensus       174 ~~~---------------------------~p~~~~~i~l~ivG~~--------~~~~l~l~~~V~f~g~~G~~~~~dl~  218 (335)
T PHA01633        174 NTK---------------------------YPDIAKKIHFFVISHK--------QFTQLEVPANVHFVAEFGHNSREYIF  218 (335)
T ss_pred             HHh---------------------------CCCccccEEEEEEcHH--------HHHHcCCCCcEEEEecCCCCCHHHHH
Confidence            763                           34    4688888732        3456677 7899995  236789999


Q ss_pred             HHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCcccccee------------------cCCceEEeC--CHH
Q 011979          357 LLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVK------------------VDKNGLLFS--SSS  416 (473)
Q Consensus       357 ~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~------------------~~~~G~~~~--~~~  416 (473)
                      .+|+.||++|+   ||..|+||++++||||||+|||+++.+++.|++.                  .+.+|+.++  |++
T Consensus       219 ~~y~~aDifV~---PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~  295 (335)
T PHA01633        219 AFYGAMDFTIV---PSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIE  295 (335)
T ss_pred             HHHHhCCEEEE---CCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHH
Confidence            99999999999   7888999999999999999999999998888644                  233577775  799


Q ss_pred             HHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHH
Q 011979          417 ELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEH  459 (473)
Q Consensus       417 ~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~  459 (473)
                      +++++|..++...  +++   ..+.++++.+++|+|+.-.++.
T Consensus       296 ~la~ai~~~~~~~--~~~---~~~~~~~~~a~~f~~~~~~~~~  333 (335)
T PHA01633        296 DMANAIILAFELQ--DRE---ERSMKLKELAKKYDIRNLYTRF  333 (335)
T ss_pred             HHHHHHHHHHhcc--Chh---hhhHHHHHHHHhcCHHHHHHHh
Confidence            9999999987651  232   3355666666789988766553

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional

Probab=99.89  E-value=9.7e-22  Score=200.17  Aligned_cols=242  Identities=13%  Similarity=0.133  Sum_probs=169.5

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHh--hCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASS--LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM  177 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~--~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~  177 (473)
                      .+-|+||++.|+.........++.+  ..++|+|+++||.+...    ......    ....++.+++.||.++|.|+.+
T Consensus        63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~----~~~~~~----~~~~~~~~~~~aD~iI~~S~~~  134 (333)
T PRK09814         63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR----FDSNYY----LMKEEIDMLNLADVLIVHSKKM  134 (333)
T ss_pred             CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh----ccccch----hhHHHHHHHHhCCEEEECCHHH
Confidence            4449999999876542212222222  23699999999985311    111111    1456788888999999999999


Q ss_pred             HHHHHHHhCCc---eEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccC
Q 011979          178 QHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK  254 (473)
Q Consensus       178 ~~~l~~~~g~~---~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (473)
                      ++++.+. |.+   +.++++.+..    .....+                                           ..+
T Consensus       135 ~~~l~~~-g~~~~~i~~~~~~~~~----~~~~~~-------------------------------------------~~~  166 (333)
T PRK09814        135 KDRLVEE-GLTTDKIIVQGIFDYL----NDIELV-------------------------------------------KTP  166 (333)
T ss_pred             HHHHHHc-CCCcCceEeccccccc----cccccc-------------------------------------------ccc
Confidence            9999874 653   3333332210    000000                                           001


Q ss_pred             CCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHH
Q 011979          255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK  334 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~  334 (473)
                      ..+ ..++|+|++.....   | +   .  .                            .++++|+|+|+|+..+     
T Consensus       167 ~~~-~~i~yaG~l~k~~~---l-~---~--~----------------------------~~~~~l~i~G~g~~~~-----  203 (333)
T PRK09814        167 SFQ-KKINFAGNLEKSPF---L-K---N--W----------------------------SQGIKLTVFGPNPEDL-----  203 (333)
T ss_pred             cCC-ceEEEecChhhchH---H-H---h--c----------------------------CCCCeEEEECCCcccc-----
Confidence            112 38999999984321   1 1   0  1                            3678999999998644     


Q ss_pred             HHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccC----CC----CCCCcHHHHHHHhcCCcEEEeccCccccceecC
Q 011979          335 IRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTS----SS----GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD  406 (473)
Q Consensus       335 ~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~----s~----~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~  406 (473)
                         ...++|.|.|. ++.++++.+|+. |+++++...    +.    ...+|.|+.||||||+|||+++.+++.++|.++
T Consensus       204 ---~~~~~V~f~G~-~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~  278 (333)
T PRK09814        204 ---ENSANISYKGW-FDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVEN  278 (333)
T ss_pred             ---ccCCCeEEecC-CCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhC
Confidence               12269999998 999999999998 877775432    11    246899999999999999999999999999999


Q ss_pred             CceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccc
Q 011979          407 KNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSAR  451 (473)
Q Consensus       407 ~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  451 (473)
                      ++|+++++.+++++.|..+.      ++.+++|++|+++.++..+
T Consensus       279 ~~G~~v~~~~el~~~l~~~~------~~~~~~m~~n~~~~~~~~~  317 (333)
T PRK09814        279 GLGFVVDSLEELPEIIDNIT------EEEYQEMVENVKKISKLLR  317 (333)
T ss_pred             CceEEeCCHHHHHHHHHhcC------HHHHHHHHHHHHHHHHHHh
Confidence            99999999999999998852      4678999999999774443

>PRK13609 diacylglycerol glucosyltransferase; Provisional

Probab=99.89  E-value=4.6e-21  Score=198.02  Aligned_cols=256  Identities=11%  Similarity=0.087  Sum_probs=174.9

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      ..+||+||++.|..  .+. ....+...++|++...+++.       ..            .+++.+.+|.++++|+.++
T Consensus       102 ~~~pD~Vi~~~~~~--~~~-~~~~~~~~~ip~~~~~td~~-------~~------------~~~~~~~ad~i~~~s~~~~  159 (380)
T PRK13609        102 AEKPDIVINTFPII--AVP-ELKKQTGISIPTYNVLTDFC-------LH------------KIWVHREVDRYFVATDHVK  159 (380)
T ss_pred             HhCcCEEEEcChHH--HHH-HHHHhcCCCCCeEEEeCCCC-------CC------------cccccCCCCEEEECCHHHH
Confidence            37899999987532  221 22223345688876555541       10            1134568999999999999


Q ss_pred             HHHHHHhCCc---eEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCC
Q 011979          179 HELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP  255 (473)
Q Consensus       179 ~~l~~~~g~~---~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (473)
                      +.+.+ .|++   +.++.+.....|.+..  .+..++.+++                                    +++
T Consensus       160 ~~l~~-~gi~~~ki~v~G~p~~~~f~~~~--~~~~~~~~~~------------------------------------l~~  200 (380)
T PRK13609        160 KVLVD-IGVPPEQVVETGIPIRSSFELKI--NPDIIYNKYQ------------------------------------LCP  200 (380)
T ss_pred             HHHHH-cCCChhHEEEECcccChHHcCcC--CHHHHHHHcC------------------------------------CCC
Confidence            99987 4764   4444332223343221  1223444443                                    344


Q ss_pred             CCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcC-C-CChHHHHH
Q 011979          256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK-G-PDKESYEE  333 (473)
Q Consensus       256 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~-g-~~~~~l~~  333 (473)
                      +++.++++.|+....|++..+++++..                               .++++++++|+ + +..+.+++
T Consensus       201 ~~~~il~~~G~~~~~k~~~~li~~l~~-------------------------------~~~~~~viv~G~~~~~~~~l~~  249 (380)
T PRK13609        201 NKKILLIMAGAHGVLGNVKELCQSLMS-------------------------------VPDLQVVVVCGKNEALKQSLED  249 (380)
T ss_pred             CCcEEEEEcCCCCCCcCHHHHHHHHhh-------------------------------CCCcEEEEEeCCCHHHHHHHHH
Confidence            566678888999999999988888753                               26788887753 3 24566777


Q ss_pred             HHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec-cCcc----ccceecCCc
Q 011979          334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCI----EELVKVDKN  408 (473)
Q Consensus       334 ~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~-~~~~----~e~i~~~~~  408 (473)
                      .+++++ ++|+|+|+   .+++.++|+.||++|.   .    +.|++++|||+||+|||+++ .++.    .+.+.+.+.
T Consensus       250 ~~~~~~-~~v~~~g~---~~~~~~l~~~aD~~v~---~----~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~G~  318 (380)
T PRK13609        250 LQETNP-DALKVFGY---VENIDELFRVTSCMIT---K----PGGITLSEAAALGVPVILYKPVPGQEKENAMYFERKGA  318 (380)
T ss_pred             HHhcCC-CcEEEEec---hhhHHHHHHhccEEEe---C----CCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhCCc
Confidence            776655 68999998   5689999999999875   2    13779999999999999985 4442    134444455


Q ss_pred             eEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHH
Q 011979          409 GLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAK  461 (473)
Q Consensus       409 G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~  461 (473)
                      |+...|+++++++|.+++++    ++.+++|++++++....++++...+.+.+
T Consensus       319 ~~~~~~~~~l~~~i~~ll~~----~~~~~~m~~~~~~~~~~~s~~~i~~~i~~  367 (380)
T PRK13609        319 AVVIRDDEEVFAKTEALLQD----DMKLLQMKEAMKSLYLPEPADHIVDDILA  367 (380)
T ss_pred             EEEECCHHHHHHHHHHHHCC----HHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence            66667899999999999985    88999999999987766666665555443

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.88  E-value=7.9e-22  Score=180.41  Aligned_cols=156  Identities=23%  Similarity=0.415  Sum_probs=141.1

Q ss_pred             CCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHH
Q 011979          256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI  335 (473)
Q Consensus       256 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~  335 (473)
                      +.+..++|+|++.+.||++.+++|+..+.++                          ..++++++|+|.++....++..+
T Consensus        13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~--------------------------~~~~~~l~i~G~~~~~~~~~~~~   66 (172)
T PF00534_consen   13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEK--------------------------KNPNYKLVIVGDGEYKKELKNLI   66 (172)
T ss_dssp             TTSEEEEEESESSGGGTHHHHHHHHHHHHHH--------------------------HHTTEEEEEESHCCHHHHHHHHH
T ss_pred             CCCeEEEEEecCccccCHHHHHHHHHHHHhh--------------------------cCCCeEEEEEccccccccccccc
Confidence            4556999999999999999999999999752                          14899999999888888899999


Q ss_pred             HHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC-
Q 011979          336 RRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS-  413 (473)
Q Consensus       336 ~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~-  413 (473)
                      +.+++ +++.|+|. ++.+++..+|+.||++|+   +|..+++|.+++|||+||+|||+++.++..+++.++.+|++++ 
T Consensus        67 ~~~~~~~~i~~~~~-~~~~~l~~~~~~~di~v~---~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~  142 (172)
T PF00534_consen   67 EKLNLKENIIFLGY-VPDDELDELYKSSDIFVS---PSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDP  142 (172)
T ss_dssp             HHTTCGTTEEEEES-HSHHHHHHHHHHTSEEEE----BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEEST
T ss_pred             cccccccccccccc-ccccccccccccceeccc---cccccccccccccccccccceeeccccCCceeeccccceEEeCC
Confidence            99999 89999998 888899999999999999   6777999999999999999999999999999999999999997 


Q ss_pred             -CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011979          414 -SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE  445 (473)
Q Consensus       414 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~  445 (473)
                       |+++++++|.+++++    ++.++.|++++++
T Consensus       143 ~~~~~l~~~i~~~l~~----~~~~~~l~~~~~~  171 (172)
T PF00534_consen  143 NDIEELADAIEKLLND----PELRQKLGKNARE  171 (172)
T ss_dssp             TSHHHHHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCC----HHHHHHHHHHhcC
Confidence             589999999999996    8999999999987

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis

Probab=99.88  E-value=2.3e-20  Score=197.77  Aligned_cols=323  Identities=17%  Similarity=0.141  Sum_probs=201.0

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHH-hhCCCeEEEEecCchhhhhhhhc-CCCchH-----------------HHHHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLLSLSL-GRRSHF-----------------VSIYRWIE  160 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~-~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~-----------------~~~~~~~e  160 (473)
                      .++|++|+|.   +.+...+..++ ...++|.|+|.|....   .... +....+                 ..-...+|
T Consensus       147 ~~~dViH~He---Wm~g~a~~~lK~~~~~VptVfTtHAT~~---GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE  220 (590)
T cd03793         147 EPAVVAHFHE---WQAGVGLPLLRKRKVDVSTIFTTHATLL---GRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIE  220 (590)
T ss_pred             CCCeEEEEcc---hhHhHHHHHHHHhCCCCCEEEEeccccc---ccccccCCcccchhhhhcchhhhhhcccchHHHHHH
Confidence            5799999999   66665555555 3467899999996521   0000 000000                 02224589


Q ss_pred             HHHhhcCCEEEEcCHHHHHHHHHHhCCc-eEEeeCC-CCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCc
Q 011979          161 KYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA  238 (473)
Q Consensus       161 ~~~~~~ad~vi~vS~~~~~~l~~~~g~~-~~vi~n~-~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  238 (473)
                      +.....||.++++|+.++.++...++.+ -.|+||| .++.|.+..  +.++++..-..++.      ++          
T Consensus       221 ~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~ViPNGid~~~f~~~~--e~~~~~~~~k~ki~------~f----------  282 (590)
T cd03793         221 RAAAHCAHVFTTVSEITAYEAEHLLKRKPDVVLPNGLNVKKFSALH--EFQNLHAQSKEKIN------EF----------  282 (590)
T ss_pred             HHHHhhCCEEEECChHHHHHHHHHhCCCCCEEeCCCcchhhcccch--hhhhhhHHhhhhhh------HH----------
Confidence            9999999999999999999999999887 3599999 556665542  11112111110000      00          


Q ss_pred             cchhhhcccccccccCCCCCeEEEEEeeccC-CCCHHHHHHHHHHhHHHHHhhhccCCC-------------ch---hhH
Q 011979          239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAILNEDDS-------------TN---EEV  301 (473)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~-~K~~~~li~a~~~l~~~~~~~~~~~~~-------------~~---~~~  301 (473)
                      -..+|..    ...+.++++.+++.+||+.. +||++.+|+|+..+..+++.    .+|             ||   .|.
T Consensus       283 ~~~~~~~----~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~----~~~~~tVvafii~p~~~~~~~~~~  354 (590)
T cd03793         283 VRGHFYG----HYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKV----EGSDTTVVAFFIMPAKTNNFNVES  354 (590)
T ss_pred             HHHHHhh----hcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHh----cCCCCeEEEEEEecCccCCcCHHh
Confidence            0011111    11234556633444899998 99999999999999885332    222             11   111


Q ss_pred             ------H----------Hhhhcc--------Ccc------------------------ccCCCEEEEEEcCCCChHHHHH
Q 011979          302 ------F----------LKEISD--------GKQ------------------------YLYPRLLFIITGKGPDKESYEE  333 (473)
Q Consensus       302 ------~----------~~~~~~--------~~~------------------------~~~~~~~l~ivG~g~~~~~l~~  333 (473)
                            .          -+.+.+        +.-                        ...|.+.=..+- ....+.+..
T Consensus       355 l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~-~~~~D~il~  433 (590)
T cd03793         355 LKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMV-DDANDPILN  433 (590)
T ss_pred             hcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCC-cCccCHHHH
Confidence                  0          000000        000                        001111111111 123455777


Q ss_pred             HHHHcCC-C------cEEEecCCCCc------ccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCcc-
Q 011979          334 KIRRLRL-K------RVAFRTMWLSA------EDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI-  399 (473)
Q Consensus       334 ~~~~~~l-~------~V~~~g~~v~~------~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~-  399 (473)
                      .+++.++ .      +|.|++-|++.      .+..++++.||++|+   ||..|+||++++||||||+|||+|+.+|+ 
T Consensus       434 ~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~---PS~yE~fG~~~lEAma~G~PvI~t~~~gf~  510 (590)
T cd03793         434 HIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVF---PSYYEPWGYTPAECTVMGIPSITTNLSGFG  510 (590)
T ss_pred             HHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEe---ccccCCCCcHHHHHHHcCCCEEEccCcchh
Confidence            7888777 2      37777776663      358899999999999   79999999999999999999999999888 


Q ss_pred             ---ccceecC-CceEEeC---------CHHHHHHHHHHHHhCCCCCHHHHHHHHHH--HHHhccccchHHHHHHHHHHH
Q 011979          400 ---EELVKVD-KNGLLFS---------SSSELADQLLMLFKGFPDDSDVLKKLRNG--TLEMGLSARWATEWEEHAKPL  463 (473)
Q Consensus       400 ---~e~i~~~-~~G~~~~---------~~~~la~~i~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~w~~~~~~~~~~~  463 (473)
                         .|++.++ ..|+.+.         ++++++++|.++++.     +.++.+.++  +.+.++.++|++..+.+.+..
T Consensus       511 ~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-----~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~  584 (590)
T cd03793         511 CFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-----SRRQRIIQRNRTERLSDLLDWRNLGRYYRKAR  584 (590)
T ss_pred             hhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-----cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence               5665544 2455542         378888888888863     344444444  446667899998888777654

GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.

>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor

Probab=99.88  E-value=8.2e-21  Score=201.48  Aligned_cols=281  Identities=12%  Similarity=0.021  Sum_probs=186.7

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH  179 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~  179 (473)
                      ...|+|++|+++.+...  ..+-.+..+.|+++.+|-.+....-...-+.+      ..+-+.+ ..+|.+..-+.....
T Consensus       130 ~~~d~iwihDyhl~llp--~~lr~~~~~~~i~~f~HipfP~~e~~~~lp~~------~~ll~~~-l~~D~igF~t~~~~~  200 (460)
T cd03788         130 RPGDLVWVHDYHLLLLP--QMLRERGPDARIGFFLHIPFPSSEIFRCLPWR------EELLRGL-LGADLIGFQTERYAR  200 (460)
T ss_pred             CCCCEEEEeChhhhHHH--HHHHhhCCCCeEEEEEeCCCCChHHHhhCCCh------HHHHHHH-hcCCEEEECCHHHHH
Confidence            46799999996443322  33333345689999999763111100100110      0111111 248888888866544


Q ss_pred             HHHHH-----------------hCC--ceEEeeCC-CCCCcccCC--hhHHHHHHHhhhhhccCCCCcccccCCCcCCCC
Q 011979          180 ELAQN-----------------WGI--KATVLYDQ-PPEFFHPTS--LEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK  237 (473)
Q Consensus       180 ~l~~~-----------------~g~--~~~vi~n~-~~~~f~~~~--~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  237 (473)
                      .+.+.                 .|.  ++.++|+| +++.|.+..  .+.+..++...+                     
T Consensus       201 ~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~---------------------  259 (460)
T cd03788         201 NFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRE---------------------  259 (460)
T ss_pred             HHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHH---------------------
Confidence            33332                 122  36888998 445565431  111121211111                     


Q ss_pred             ccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCC-
Q 011979          238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR-  316 (473)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  316 (473)
                                     ..++++ +++++||+.+.||++.+++|+..+.++                           +|+ 
T Consensus       260 ---------------~~~~~~-~il~vgRl~~~Kgi~~ll~A~~~ll~~---------------------------~p~~  296 (460)
T cd03788         260 ---------------RLGGRK-LIVGVDRLDYSKGIPERLLAFERLLER---------------------------YPEW  296 (460)
T ss_pred             ---------------hcCCCE-EEEEecCccccCCHHHHHHHHHHHHHh---------------------------Chhh
Confidence                           122333 899999999999999999999988763                           454 


Q ss_pred             ---EEEEEEcCC-----CChHHHHHHHH----HcC-------CCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCC
Q 011979          317 ---LLFIITGKG-----PDKESYEEKIR----RLR-------LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDL  377 (473)
Q Consensus       317 ---~~l~ivG~g-----~~~~~l~~~~~----~~~-------l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~  377 (473)
                         ++|+++|.+     +..+.+++.++    +++       ...|.++++.++.+++..+|+.||++|+   +|..|+|
T Consensus       297 ~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~---pS~~Eg~  373 (460)
T cd03788         297 RGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALV---TPLRDGM  373 (460)
T ss_pred             cCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEe---Ccccccc
Confidence               678888643     33334444443    332       2346666544899999999999999999   7889999


Q ss_pred             cHHHHHHHhcCCc----EEEeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccc
Q 011979          378 PMKVVDMFGCGLP----VCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSAR  451 (473)
Q Consensus       378 p~kv~Eama~G~P----vI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  451 (473)
                      |++++||||||+|    ||+|+.+|..+.   +.+|++++  |+++++++|.+++++   ++++++.+++++++...+++
T Consensus       374 ~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d~~~la~ai~~~l~~---~~~e~~~~~~~~~~~v~~~~  447 (460)
T cd03788         374 NLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYDIDEVADAIHRALTM---PLEERRERHRKLREYVRTHD  447 (460)
T ss_pred             CcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhCC
Confidence            9999999999999    999988887776   46789986  799999999999986   56788888899988887888


Q ss_pred             hHHHHHHHHHH
Q 011979          452 WATEWEEHAKP  462 (473)
Q Consensus       452 w~~~~~~~~~~  462 (473)
                      |+.-.++.+..
T Consensus       448 ~~~w~~~~l~~  458 (460)
T cd03788         448 VQAWANSFLDD  458 (460)
T ss_pred             HHHHHHHHHHh
Confidence            76655555544

It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.

>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.86  E-value=6.2e-19  Score=172.82  Aligned_cols=289  Identities=20%  Similarity=0.277  Sum_probs=204.3

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCch-hhh-hhhhcCC-Cc-h-------HHHHHHHHHHHHhhcCC
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFG-YTL-LSLSLGR-RS-H-------FVSIYRWIEKYYGKMAN  168 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~-~~~-~~~~~~~-~~-~-------~~~~~~~~e~~~~~~ad  168 (473)
                      -.||+.+-+....+..    -+.+.++++|++...|-.. .+. +..-..+ .+ .       ..+++..+.+.....||
T Consensus       149 ~~Pdi~IDtMGY~fs~----p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY~~~G~~ad  224 (465)
T KOG1387|consen  149 FPPDIFIDTMGYPFSY----PIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLYQSAGSKAD  224 (465)
T ss_pred             CCchheEecCCCcchh----HHHHHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHHHhccccce
Confidence            6799887554222221    2235578999999888653 111 1111111 11 1       12334445666677899


Q ss_pred             EEEEcCHHHHHHHHHHhCCc-eEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccc
Q 011979          169 GCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLA  247 (473)
Q Consensus       169 ~vi~vS~~~~~~l~~~~g~~-~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (473)
                      .+++.|.++++.+.+-|+.. ..++|.       |.+.++-..+   .+                               
T Consensus       225 ~vm~NssWT~nHI~qiW~~~~~~iVyP-------PC~~e~lks~---~~-------------------------------  263 (465)
T KOG1387|consen  225 IVMTNSSWTNNHIKQIWQSNTCSIVYP-------PCSTEDLKSK---FG-------------------------------  263 (465)
T ss_pred             EEEecchhhHHHHHHHhhccceeEEcC-------CCCHHHHHHH---hc-------------------------------
Confidence            99999999999999999775 455543       2222211111   01                               


Q ss_pred             ccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC
Q 011979          248 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD  327 (473)
Q Consensus       248 ~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~  327 (473)
                           ....+...++++|.+.++|+.. +++.+..+..+   ...|+                  ..++++|+|+|+...
T Consensus       264 -----te~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~---~pl~a------------------~~~~iKL~ivGScRn  316 (465)
T KOG1387|consen  264 -----TEGERENQLLSLAQFRPEKNHK-ILQLFALYLKN---EPLEA------------------SVSPIKLIIVGSCRN  316 (465)
T ss_pred             -----ccCCcceEEEEEeecCcccccH-HHHHHHHHHhc---Cchhh------------------ccCCceEEEEeccCC
Confidence                 1122445899999999999999 66666554431   11111                  246799999997532


Q ss_pred             h------HHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCcc-
Q 011979          328 K------ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI-  399 (473)
Q Consensus       328 ~------~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~-  399 (473)
                      +      +.++++++.+++ ++|.|.-. +|.+++..+|..|.++|.   .-..|.||+.+.||||+|+-.|+.+.||. 
T Consensus       317 eeD~ervk~Lkd~a~~L~i~~~v~F~~N-~Py~~lv~lL~~a~iGvh---~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~  392 (465)
T KOG1387|consen  317 EEDEERVKSLKDLAEELKIPKHVQFEKN-VPYEKLVELLGKATIGVH---TMWNEHFGISVVEYMAAGLIPIVHNSGGPL  392 (465)
T ss_pred             hhhHHHHHHHHHHHHhcCCccceEEEec-CCHHHHHHHhccceeehh---hhhhhhcchhHHHHHhcCceEEEeCCCCCc
Confidence            2      557788899999 79999977 999999999999999998   66889999999999999999999987664 


Q ss_pred             ccceecC---CceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc---cccchHHHHHHHHHHHHHHH
Q 011979          400 EELVKVD---KNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG---LSARWATEWEEHAKPLITEV  467 (473)
Q Consensus       400 ~e~i~~~---~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~w~~~~~~~~~~~~~~~  467 (473)
                      -++|.+.   .+|++.++.++.+++|.+++..   +.+++..|+++|++..   ++..+++.|+..+.++++|.
T Consensus       393 lDIV~~~~G~~tGFla~t~~EYaE~iLkIv~~---~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~e~  463 (465)
T KOG1387|consen  393 LDIVTPWDGETTGFLAPTDEEYAEAILKIVKL---NYDERNMMRRNARKSLARFGELKFDKDWENPICKLLEEE  463 (465)
T ss_pred             eeeeeccCCccceeecCChHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhccc
Confidence            4666543   3799999999999999999987   7888999999998765   34568899998888888763

>PLN02605 monogalactosyldiacylglycerol synthase

Probab=99.85  E-value=2.8e-19  Score=185.38  Aligned_cols=266  Identities=17%  Similarity=0.188  Sum_probs=176.0

Q ss_pred             hCCCCEEEEeCCCch--hHHHHHHHHH-hhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCH
Q 011979           99 IASPDVFLVQNPPSV--PTLVAVKWAS-SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ  175 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~--~~~~~~~~~~-~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~  175 (473)
                      ..+||+||++.|...  +...+..+.. ...++|++....|++.      .   +         ..++.+.+|.++++|+
T Consensus        98 ~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~------~---~---------~~w~~~~~d~~~~~s~  159 (382)
T PLN02605         98 KYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGT------C---H---------PTWFHKGVTRCFCPSE  159 (382)
T ss_pred             hcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCC------c---C---------cccccCCCCEEEECCH
Confidence            378999999765322  2221111110 1247888887777720      0   0         1233468999999999


Q ss_pred             HHHHHHHHHhCCc---eEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccc
Q 011979          176 AMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF  252 (473)
Q Consensus       176 ~~~~~l~~~~g~~---~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (473)
                      .+++.+.+. |.+   +.++.++....|.... ..+.+++.+++                                    
T Consensus       160 ~~~~~l~~~-g~~~~ki~v~g~~v~~~f~~~~-~~~~~~r~~~g------------------------------------  201 (382)
T PLN02605        160 EVAKRALKR-GLEPSQIRVYGLPIRPSFARAV-RPKDELRRELG------------------------------------  201 (382)
T ss_pred             HHHHHHHHc-CCCHHHEEEECcccCHhhccCC-CCHHHHHHHcC------------------------------------
Confidence            999998874 765   5665554333343221 13445666655                                    


Q ss_pred             cCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEE-EEEEcCCCChHHH
Q 011979          253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIITGKGPDKESY  331 (473)
Q Consensus       253 ~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ivG~g~~~~~l  331 (473)
                      ++++++ +++++|+....|++..+++++......                      . ....++.. ++++|+++.   +
T Consensus       202 l~~~~~-~il~~Gg~~g~~~~~~li~~l~~~~~~----------------------~-~~~~~~~~~~vi~G~~~~---~  254 (382)
T PLN02605        202 MDEDLP-AVLLMGGGEGMGPLEETARALGDSLYD----------------------K-NLGKPIGQVVVICGRNKK---L  254 (382)
T ss_pred             CCCCCc-EEEEECCCcccccHHHHHHHHHHhhcc----------------------c-cccCCCceEEEEECCCHH---H
Confidence            344455 788899888889999999998764310                      0 00124454 677887642   2


Q ss_pred             HHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc------Ccccccee
Q 011979          332 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY------SCIEELVK  404 (473)
Q Consensus       332 ~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~------~~~~e~i~  404 (473)
                      ++.+++... .+|.|+|+   .++++++|+.||++|.   ++ +   |++++|||+||+|||+++.      ++. +.+.
T Consensus       255 ~~~L~~~~~~~~v~~~G~---~~~~~~l~~aaDv~V~---~~-g---~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~  323 (382)
T PLN02605        255 QSKLESRDWKIPVKVRGF---VTNMEEWMGACDCIIT---KA-G---PGTIAEALIRGLPIILNGYIPGQEEGNV-PYVV  323 (382)
T ss_pred             HHHHHhhcccCCeEEEec---cccHHHHHHhCCEEEE---CC-C---cchHHHHHHcCCCEEEecCCCccchhhH-HHHH
Confidence            233333332 47999998   5699999999999998   33 2   6799999999999999983      333 4455


Q ss_pred             cCCceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Q 011979          405 VDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLIT  465 (473)
Q Consensus       405 ~~~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~  465 (473)
                      +++.|+...|+++++++|.+++++   +++.+++|++++++.....+    ++++++.+++
T Consensus       324 ~~g~g~~~~~~~~la~~i~~ll~~---~~~~~~~m~~~~~~~~~~~a----~~~i~~~l~~  377 (382)
T PLN02605        324 DNGFGAFSESPKEIARIVAEWFGD---KSDELEAMSENALKLARPEA----VFDIVHDLHE  377 (382)
T ss_pred             hCCceeecCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhcCCch----HHHHHHHHHH
Confidence            677888888999999999999985   48899999999998654444    4554444443

>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.85  E-value=5.2e-19  Score=187.08  Aligned_cols=276  Identities=11%  Similarity=0.053  Sum_probs=186.1

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHh-hCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      ..-|+|++|+...+   .+..+++. ..+.++.+.+|-.+....-  + +.-+.+.  ..++..  -.||.|-.-|....
T Consensus       126 ~~~d~vwvhDYhl~---l~p~~lr~~~~~~~igfFlHipfP~~e~--f-~~lp~r~--~il~gl--l~~dligF~t~~~~  195 (456)
T TIGR02400       126 QPGDIVWVHDYHLM---LLPAMLRELGVQNKIGFFLHIPFPSSEI--Y-RTLPWRR--ELLEGL--LAYDLVGFQTYDDA  195 (456)
T ss_pred             CCCCEEEEecchhh---HHHHHHHhhCCCCeEEEEEeCCCCChHH--H-hhCCcHH--HHHHHH--hcCCEEEECCHHHH
Confidence            45689999995433   33444444 3467888888976311100  0 0001100  011111  26899988888887


Q ss_pred             HHHHHH----hC------------Cc--eEEeeCC-CCCCcccCCh--h---HHHHHHHhhhhhccCCCCcccccCCCcC
Q 011979          179 HELAQN----WG------------IK--ATVLYDQ-PPEFFHPTSL--E---EKHELFCRLNKILHQPLGVQDCVSNGME  234 (473)
Q Consensus       179 ~~l~~~----~g------------~~--~~vi~n~-~~~~f~~~~~--~---~~~~l~~~l~~~~~~~~~~~~~~~~~~~  234 (473)
                      +.+.+.    .|            ..  +.++|+| +++.|.+...  +   ...+++.+++                  
T Consensus       196 ~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~------------------  257 (456)
T TIGR02400       196 RNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLK------------------  257 (456)
T ss_pred             HHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcC------------------
Confidence            666542    12            22  6788998 4466654311  1   1112332221                  


Q ss_pred             CCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccC
Q 011979          235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY  314 (473)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (473)
                                           +++ +++++||+.+.||++.+++|++.+.++                           +
T Consensus       258 ---------------------~~~-vIl~VgRLd~~KGi~~ll~A~~~ll~~---------------------------~  288 (456)
T TIGR02400       258 ---------------------GRK-LIIGVDRLDYSKGLPERLLAFERFLEE---------------------------H  288 (456)
T ss_pred             ---------------------CCe-EEEEccccccccCHHHHHHHHHHHHHh---------------------------C
Confidence                                 233 899999999999999999999998663                           4


Q ss_pred             CC----EEEEEEc-----CCCChHHHHHHHHHc--------CC-C--cEEEecCCCCcccHHHHHhcCcEEEEeccCCCC
Q 011979          315 PR----LLFIITG-----KGPDKESYEEKIRRL--------RL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG  374 (473)
Q Consensus       315 ~~----~~l~ivG-----~g~~~~~l~~~~~~~--------~l-~--~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~  374 (473)
                      |+    +.|+++|     +++....+++.++++        +. .  -|.+++..++.+++..+|+.||++|+   +|..
T Consensus       289 p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv---~S~~  365 (456)
T TIGR02400       289 PEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLV---TPLR  365 (456)
T ss_pred             ccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEE---Cccc
Confidence            54    5677774     445556666666654        11 1  25555544899999999999999999   7899


Q ss_pred             CCCcHHHHHHHhcCCc----EEEeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcc
Q 011979          375 LDLPMKVVDMFGCGLP----VCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGL  448 (473)
Q Consensus       375 e~~p~kv~Eama~G~P----vI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~  448 (473)
                      |+||++++||||||+|    +|+|+.+|..+.+.   +|++++  |++++|++|.+++++   +++++++..+..++...
T Consensus       366 EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~~---~~~er~~r~~~~~~~v~  439 (456)
T TIGR02400       366 DGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDIDGMADAIARALTM---PLEEREERHRAMMDKLR  439 (456)
T ss_pred             cccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHh
Confidence            9999999999999999    99999888887773   788886  799999999999986   57788888887777776


Q ss_pred             ccchHHHHHHHHH
Q 011979          449 SARWATEWEEHAK  461 (473)
Q Consensus       449 ~~~w~~~~~~~~~  461 (473)
                      .+++..-.++.+.
T Consensus       440 ~~~~~~W~~~~l~  452 (456)
T TIGR02400       440 KNDVQRWREDFLS  452 (456)
T ss_pred             hCCHHHHHHHHHH
Confidence            6766544444443

This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.84  E-value=1.3e-18  Score=163.16  Aligned_cols=120  Identities=33%  Similarity=0.443  Sum_probs=105.2

Q ss_pred             EEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHHHHcCC-C
Q 011979          263 SSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-K  341 (473)
Q Consensus       263 ~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l-~  341 (473)
                      |+|++.+.||++.+++++..+.++                           .++++++++|.++.....++.+.+++. +
T Consensus       109 ~~g~~~~~k~~~~~~~a~~~l~~~---------------------------~~~~~~~i~G~~~~~~~~~~~~~~~~~~~  161 (229)
T cd01635         109 FVGRLAPEKGLDDLIEAFALLKER---------------------------GPDLKLVIAGDGPEREYLEELLAALLLLD  161 (229)
T ss_pred             EEEeecccCCHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCCChHHHHHHHHhcCCcc
Confidence            899999999999999999999773                           589999999999887777766777776 8


Q ss_pred             cEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEe
Q 011979          342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF  412 (473)
Q Consensus       342 ~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~  412 (473)
                      +|.+.|...+.+++..+++.||++++   ++..+++|++++|||+||+|+|+++.++..|++.++.+|+++
T Consensus       162 ~v~~~~~~~~~~~~~~~~~~~di~l~---~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~  229 (229)
T cd01635         162 RVIFLGGLDPEELLALLLAAADVFVL---PSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV  229 (229)
T ss_pred             cEEEeCCCCcHHHHHHHhhcCCEEEe---cccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence            99999983356677777777999999   677779999999999999999999999999999999999874

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK13608 diacylglycerol glucosyltransferase; Provisional

Probab=99.83  E-value=2.5e-18  Score=178.89  Aligned_cols=256  Identities=12%  Similarity=0.157  Sum_probs=174.6

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      ..+||+|+++.|.  +.. .....+...++|++....|+.       ...            .++.+.+|.+++.|+.++
T Consensus       102 ~~kPDvVi~~~p~--~~~-~~l~~~~~~~iP~~~v~td~~-------~~~------------~w~~~~~d~~~v~s~~~~  159 (391)
T PRK13608        102 KEKPDLILLTFPT--PVM-SVLTEQFNINIPVATVMTDYR-------LHK------------NWITPYSTRYYVATKETK  159 (391)
T ss_pred             HhCcCEEEECCcH--HHH-HHHHHhcCCCCCEEEEeCCCC-------ccc------------ccccCCCCEEEECCHHHH
Confidence            3799999998653  222 111222334789865545441       110            123468999999999999


Q ss_pred             HHHHHHhCCc---eEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCC
Q 011979          179 HELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP  255 (473)
Q Consensus       179 ~~l~~~~g~~---~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (473)
                      +.+.+ .|++   +.++.+...+.|....  .+.+.+.+++                                    +++
T Consensus       160 ~~l~~-~gi~~~ki~v~GiPv~~~f~~~~--~~~~~~~~~~------------------------------------l~~  200 (391)
T PRK13608        160 QDFID-VGIDPSTVKVTGIPIDNKFETPI--DQKQWLIDNN------------------------------------LDP  200 (391)
T ss_pred             HHHHH-cCCCHHHEEEECeecChHhcccc--cHHHHHHHcC------------------------------------CCC
Confidence            99987 4764   4454333334443321  1233444433                                    345


Q ss_pred             CCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHH
Q 011979          256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI  335 (473)
Q Consensus       256 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~  335 (473)
                      +++.+++++|+++..|+++.+++++..  .                            .+++++++++++. .+..+++.
T Consensus       201 ~~~~ilv~~G~lg~~k~~~~li~~~~~--~----------------------------~~~~~~vvv~G~~-~~l~~~l~  249 (391)
T PRK13608        201 DKQTILMSAGAFGVSKGFDTMITDILA--K----------------------------SANAQVVMICGKS-KELKRSLT  249 (391)
T ss_pred             CCCEEEEECCCcccchhHHHHHHHHHh--c----------------------------CCCceEEEEcCCC-HHHHHHHH
Confidence            566678889999999999999998632  1                            3678886664322 22223333


Q ss_pred             HHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec-cCc----cccceecCCce
Q 011979          336 RRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSC----IEELVKVDKNG  409 (473)
Q Consensus       336 ~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~-~~~----~~e~i~~~~~G  409 (473)
                      +.++. ++|.++|+   .++++++|+.||++|.   .+    .|+++.|||++|+|+|+++ .++    ...++.+.+.|
T Consensus       250 ~~~~~~~~v~~~G~---~~~~~~~~~~aDl~I~---k~----gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g  319 (391)
T PRK13608        250 AKFKSNENVLILGY---TKHMNEWMASSQLMIT---KP----GGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFG  319 (391)
T ss_pred             HHhccCCCeEEEec---cchHHHHHHhhhEEEe---CC----chHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcE
Confidence            33444 68999998   5799999999999996   22    3679999999999999996 333    22344567788


Q ss_pred             EEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHH
Q 011979          410 LLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHA  460 (473)
Q Consensus       410 ~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~  460 (473)
                      +..+|.++++++|.+++++    ++.+++|++++++....++|++..+...
T Consensus       320 ~~~~~~~~l~~~i~~ll~~----~~~~~~m~~~~~~~~~~~s~~~i~~~l~  366 (391)
T PRK13608        320 KIADTPEEAIKIVASLTNG----NEQLTNMISTMEQDKIKYATQTICRDLL  366 (391)
T ss_pred             EEeCCHHHHHHHHHHHhcC----HHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence            8888999999999999985    8999999999999887788877666544

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=99.83  E-value=2.8e-18  Score=177.01  Aligned_cols=249  Identities=19%  Similarity=0.209  Sum_probs=163.0

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      ..+||+||+++.+..+... +. .++..++|+++..++..+.     . ...   +    . +.+.+.+|.+++.|+..+
T Consensus        83 ~~kPdivi~~~~~~~~~~~-a~-~a~~~~ip~i~~~~~~~~~-----~-~~~---~----~-~~~~~~~d~i~~~~~~~~  146 (380)
T PRK00025         83 AEPPDVFIGIDAPDFNLRL-EK-KLRKAGIPTIHYVSPSVWA-----W-RQG---R----A-FKIAKATDHVLALFPFEA  146 (380)
T ss_pred             HcCCCEEEEeCCCCCCHHH-HH-HHHHCCCCEEEEeCCchhh-----c-Cch---H----H-HHHHHHHhhheeCCccCH
Confidence            3789999998754443332 22 2344589998876654110     0 000   1    1 123567899999999998


Q ss_pred             HHHHHHhCCceEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCC
Q 011979          179 HELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRP  258 (473)
Q Consensus       179 ~~l~~~~g~~~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (473)
                      +.+.+ .|.++.++.|...+.+.+..  .+...+.+++                                    ++++++
T Consensus       147 ~~~~~-~g~~~~~~G~p~~~~~~~~~--~~~~~~~~l~------------------------------------~~~~~~  187 (380)
T PRK00025        147 AFYDK-LGVPVTFVGHPLADAIPLLP--DRAAARARLG------------------------------------LDPDAR  187 (380)
T ss_pred             HHHHh-cCCCeEEECcCHHHhccccc--ChHHHHHHcC------------------------------------CCCCCC
Confidence            88866 57664444332112221111  2333444443                                    344455


Q ss_pred             eEEEEEeec-cCC-CCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcC-CCChHHHHHHH
Q 011979          259 ALVVSSTSW-TPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK-GPDKESYEEKI  335 (473)
Q Consensus       259 ~~i~~~G~~-~~~-K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~-g~~~~~l~~~~  335 (473)
                      .++++.|+- .+. +..+.+++|+..+.++                           .|+++++++|+ ++..+.+++.+
T Consensus       188 ~il~~~gsr~~~~~~~~~~l~~a~~~l~~~---------------------------~~~~~~ii~~~~~~~~~~~~~~~  240 (380)
T PRK00025        188 VLALLPGSRGQEIKRLLPPFLKAAQLLQQR---------------------------YPDLRFVLPLVNPKRREQIEEAL  240 (380)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHHHHHHHh---------------------------CCCeEEEEecCChhhHHHHHHHH
Confidence            455666643 332 4468899999988763                           57899999986 55667788888


Q ss_pred             HHc-CCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe-----------------ccC
Q 011979          336 RRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-----------------SYS  397 (473)
Q Consensus       336 ~~~-~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~-----------------~~~  397 (473)
                      +++ ++. +.+.     .+++..+|+.||++|+   +|     |...+|||++|+|+|++                 +.+
T Consensus       241 ~~~~~~~-v~~~-----~~~~~~~~~~aDl~v~---~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~  306 (380)
T PRK00025        241 AEYAGLE-VTLL-----DGQKREAMAAADAALA---AS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYV  306 (380)
T ss_pred             hhcCCCC-eEEE-----cccHHHHHHhCCEEEE---Cc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCee
Confidence            777 553 4443     3689999999999999   44     56788999999999987                 344


Q ss_pred             ccccceecCC--ceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          398 CIEELVKVDK--NGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       398 ~~~e~i~~~~--~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      ++.+++.++.  .+++.+  |++++++.+.+++++    ++.+++|++++.+..
T Consensus       307 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~  356 (380)
T PRK00025        307 SLPNLLAGRELVPELLQEEATPEKLARALLPLLAD----GARRQALLEGFTELH  356 (380)
T ss_pred             ehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcC----HHHHHHHHHHHHHHH
Confidence            5566665543  345543  689999999999995    899999999975544

>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]

Probab=99.80  E-value=1.1e-16  Score=168.78  Aligned_cols=293  Identities=17%  Similarity=0.131  Sum_probs=206.6

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHh----hCCCeEEEEecCchhhhhhh--hcC-CCchHHHHHH----------HHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASS----LRRSAFIVDWHNFGYTLLSL--SLG-RRSHFVSIYR----------WIEKY  162 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~----~~~~~~i~~~h~~~~~~~~~--~~~-~~~~~~~~~~----------~~e~~  162 (473)
                      ..||+||+|+   +.+.++..+.+.    ...+|.|+|+|+..|.-...  ... -.-+. -.+.          ...|.
T Consensus       129 ~~pDIvH~hD---Wqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~-~~~~~~~l~~~~~~~~lK~  204 (487)
T COG0297         129 WLPDIVHAHD---WQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPF-EAYASFGLEFYGQISFLKG  204 (487)
T ss_pred             CCCCEEEeec---HHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCH-HHhhhceeeecCcchhhhh
Confidence            3699999999   666655555555    45799999999986422110  000 00000 1111          23444


Q ss_pred             HhhcCCEEEEcCHHHHHHHHHH-hC-----------CceEEeeCC-CCCCcccCChh----------------HHHHHHH
Q 011979          163 YGKMANGCLCVTQAMQHELAQN-WG-----------IKATVLYDQ-PPEFFHPTSLE----------------EKHELFC  213 (473)
Q Consensus       163 ~~~~ad~vi~vS~~~~~~l~~~-~g-----------~~~~vi~n~-~~~~f~~~~~~----------------~~~~l~~  213 (473)
                      -...||.|.+||+...+++... +|           .+..-|.|+ +.+.+.|.+..                .+..|..
T Consensus       205 gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~  284 (487)
T COG0297         205 GLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQE  284 (487)
T ss_pred             hheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHH
Confidence            4558999999999999988722 22           125667777 33445443211                1222333


Q ss_pred             hhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhcc
Q 011979          214 RLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE  293 (473)
Q Consensus       214 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~  293 (473)
                      +++.                                  ....+.| ++.++||+..+||++.+++++..+.+.       
T Consensus       285 ~~gL----------------------------------~~~~~~p-l~~~vsRl~~QKG~dl~~~~i~~~l~~-------  322 (487)
T COG0297         285 RLGL----------------------------------DVDLPGP-LFGFVSRLTAQKGLDLLLEAIDELLEQ-------  322 (487)
T ss_pred             HhCC----------------------------------CCCCCCc-EEEEeeccccccchhHHHHHHHHHHHh-------
Confidence            3321                                  1122344 999999999999999999999999872       


Q ss_pred             CCCchhhHHHhhhccCccccCCCEEEEEEcCCCC--hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccC
Q 011979          294 DDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTS  371 (473)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~--~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~  371 (473)
                                            .+++++.|.|..  .+.+..+++.+.. ++.+.- |.+..-...++..||++++   |
T Consensus       323 ----------------------~~~~vilG~gd~~le~~~~~la~~~~~-~~~~~i-~~~~~la~~i~agaD~~lm---P  375 (487)
T COG0297         323 ----------------------GWQLVLLGTGDPELEEALRALASRHPG-RVLVVI-GYDEPLAHLIYAGADVILM---P  375 (487)
T ss_pred             ----------------------CceEEEEecCcHHHHHHHHHHHHhcCc-eEEEEe-eecHHHHHHHHhcCCEEEe---C
Confidence                                  499999999932  2555566666653 444443 3678888999999999999   8


Q ss_pred             CCCCCCcHHHHHHHhcCCcEEEeccCccccceec--------CCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 011979          372 SSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV--------DKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRN  441 (473)
Q Consensus       372 s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~--------~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~  441 (473)
                      |.+|+||..-++||+.|++.|+..+||+++.|.+        ..+|+++.  |.++++.+|.+...-+...+...+.+..
T Consensus       376 SrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~  455 (487)
T COG0297         376 SRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQP  455 (487)
T ss_pred             CcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence            9999999999999999999999999999999986        57999995  7999999999887655545665888888


Q ss_pred             HHHHhccccchHHHHHHHHHHHHHHHh
Q 011979          442 GTLEMGLSARWATEWEEHAKPLITEVI  468 (473)
Q Consensus       442 ~~~~~~~~~~w~~~~~~~~~~~~~~~~  468 (473)
                      ++..  ..++|+...++.. .+++.+.
T Consensus       456 ~~m~--~d~sw~~sa~~y~-~lY~~~~  479 (487)
T COG0297         456 NAMG--ADFSWDLSAKEYV-ELYKPLL  479 (487)
T ss_pred             hhcc--cccCchhHHHHHH-HHHHHHh
Confidence            8877  4799999988854 4555444

>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.79  E-value=5.2e-18  Score=176.71  Aligned_cols=293  Identities=18%  Similarity=0.175  Sum_probs=191.9

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCC----CeEEEEecCchhhhhhhhcCC-CchHHHHHHHHHHHHhhcCCEEEEcC
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRR----SAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRWIEKYYGKMANGCLCVT  174 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~----~~~i~~~h~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~ad~vi~vS  174 (473)
                      .+.|.++...   .  .....+...+.+    ..+..++|... ..++.+.+- .........+++......++.+++.|
T Consensus       144 ~~~d~~i~d~---~--~~~~~l~~~~~~p~~~~~i~~~~h~~~-~lla~r~g~~~~l~~~~l~~~e~e~~~~~~~~~~ns  217 (495)
T KOG0853|consen  144 EKVDPIIEDF---V--SACVPLLKQLSGPDVIIKIYFYCHFPD-SLLAKRLGVLKVLYRHALDKIEEETTGLAWKILVNS  217 (495)
T ss_pred             hhhceeecch---H--HHHHHHHHHhcCCcccceeEEeccchH-HHhccccCccceeehhhhhhhhhhhhhccceEecch
Confidence            4567776665   2  112334444453    55666888773 222222111 11112334566767777899999999


Q ss_pred             HHHHHHHHHHh---CC-ceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccccc
Q 011979          175 QAMQHELAQNW---GI-KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGI  249 (473)
Q Consensus       175 ~~~~~~l~~~~---g~-~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (473)
                      ...+..++..+   +. ++++.+-..+ +.+.+.--+...++.......                               
T Consensus       218 ~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~-------------------------------  266 (495)
T KOG0853|consen  218 YFTKRQFKATFVSLSNSDITSTYPEIDGSWFTYGQYESHLELRLPVRLY-------------------------------  266 (495)
T ss_pred             hhhhhhhhhhhhhcCCCCcceeeccccchhccccccccchhccccccee-------------------------------
Confidence            98887776643   11 1444444432 222211000111111110000                               


Q ss_pred             ccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCC-C--
Q 011979          250 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-P--  326 (473)
Q Consensus       250 ~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g-~--  326 (473)
                        ..-.+....+..+.++.+.||+..+++|+..+....                   .+   ...++.++.++|+. -  
T Consensus       267 --~~v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i-------------------~~---~~~~~~hl~~~g~~G~d~  322 (495)
T KOG0853|consen  267 --RGVSGIDRFFPSINRFEPGKDQDLALPAFTLLHDSI-------------------PE---PSISSEHLVVAGSRGYDE  322 (495)
T ss_pred             --eeecccceEeeeeeecCCCCCceeehhhHHhhhccc-------------------CC---CCCCceEEEEecCCCccc
Confidence              001111237778899999999999999999987731                   11   12467888999832 1  


Q ss_pred             -------ChHHHHHHHHHcCC--CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC
Q 011979          327 -------DKESYEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS  397 (473)
Q Consensus       327 -------~~~~l~~~~~~~~l--~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~  397 (473)
                             ..+++.++++++++  +.|.|+..   ..+...|...||.-+...+|.. |.||++.+|||+||+||+|++.|
T Consensus       323 ~~sen~~~~~el~~lie~~~l~g~~v~~~~s---~~~~~~yrl~adt~~v~~qPa~-E~FGiv~IEAMa~glPvvAt~~G  398 (495)
T KOG0853|consen  323 RDSENVEYLKELLSLIEEYDLLGQFVWFLPS---TTRVAKYRLAADTKGVLYQPAN-EHFGIVPIEAMACGLPVVATNNG  398 (495)
T ss_pred             cchhhHHHHHHHHHHHHHhCccCceEEEecC---CchHHHHHHHHhcceEEecCCC-CCccceeHHHHhcCCCEEEecCC
Confidence                   12667888999988  57888755   5666667778888777666666 99999999999999999999999


Q ss_pred             ccccceecCCceEEeC-CHH---HHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccc-cchHHHHHHHHH
Q 011979          398 CIEELVKVDKNGLLFS-SSS---ELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS-ARWATEWEEHAK  461 (473)
Q Consensus       398 ~~~e~i~~~~~G~~~~-~~~---~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~w~~~~~~~~~  461 (473)
                      |..|+|.++.+|++++ +.+   .++++|.++..+    ++.+.+|++++++.+.+ |+|..--++++.
T Consensus       399 GP~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~~~----p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~  463 (495)
T KOG0853|consen  399 GPAEIVVHGVTGLLIDPGQEAVAELADALLKLRRD----PELWARMGKNGLKRVKEMFSWQHYSERIAS  463 (495)
T ss_pred             CceEEEEcCCcceeeCCchHHHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            9999999999999997 444   699999999985    99999999999998854 999555555443

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.78  E-value=3.6e-17  Score=183.33  Aligned_cols=275  Identities=11%  Similarity=0.055  Sum_probs=184.9

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHH-hhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~-~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      ..-|+|.+|+...+.   +...+. ...+.++.+.+|-.+....-++.-+.   +.  ..++..  -.||.|-.-|....
T Consensus       146 ~~~d~vWvhDYhL~l---lp~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~---r~--~il~gl--l~aDligF~t~~y~  215 (797)
T PLN03063        146 EEGDVVWCHDYHLMF---LPQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPS---RS--ELLRAV--LTADLIGFHTYDFA  215 (797)
T ss_pred             CCCCEEEEecchhhh---HHHHHHHhCCCCcEEEEecCCCCCHHHHhhCCC---HH--HHHHHH--hcCCEEEeCCHHHH
Confidence            445899999954332   333443 35678889999987421111011111   00  111222  25777777777776


Q ss_pred             HHHHHH----------------hCC--ceEEeeCCC-CCCcccCC--hhHHH---HHHHhhhhhccCCCCcccccCCCcC
Q 011979          179 HELAQN----------------WGI--KATVLYDQP-PEFFHPTS--LEEKH---ELFCRLNKILHQPLGVQDCVSNGME  234 (473)
Q Consensus       179 ~~l~~~----------------~g~--~~~vi~n~~-~~~f~~~~--~~~~~---~l~~~l~~~~~~~~~~~~~~~~~~~  234 (473)
                      ..+.+.                .|.  ++.++|+|. ++.|.+..  .+.+.   +++..+                   
T Consensus       216 r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-------------------  276 (797)
T PLN03063        216 RHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFF-------------------  276 (797)
T ss_pred             HHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhc-------------------
Confidence            655442                122  267889984 35554331  11111   222211                   


Q ss_pred             CCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccC
Q 011979          235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY  314 (473)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (473)
                                          .+++ +++++||+.+.||++.+++|+..+.++                           +
T Consensus       277 --------------------~~~~-lIl~VgRLd~~KGi~~lL~Afe~lL~~---------------------------~  308 (797)
T PLN03063        277 --------------------AGRK-VILGVDRLDMIKGIPQKYLAFEKFLEE---------------------------N  308 (797)
T ss_pred             --------------------CCCe-EEEEecccccccCHHHHHHHHHHHHHh---------------------------C
Confidence                                1233 899999999999999999999998763                           5


Q ss_pred             CCE----EEEEE-----cCCCChHHHHHHHHHcC--C-C--------cEEEecCCCCcccHHHHHhcCcEEEEeccCCCC
Q 011979          315 PRL----LFIIT-----GKGPDKESYEEKIRRLR--L-K--------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG  374 (473)
Q Consensus       315 ~~~----~l~iv-----G~g~~~~~l~~~~~~~~--l-~--------~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~  374 (473)
                      |++    .|+.+     |+|+..+.+++.++++.  + .        -|.+++..++.+++..+|+.||++|+   +|..
T Consensus       309 P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvv---tSlr  385 (797)
T PLN03063        309 PEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLV---TSLR  385 (797)
T ss_pred             ccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEe---Cccc
Confidence            665    34433     34455566777777663  2 1        24455545899999999999999999   8999


Q ss_pred             CCCcHHHHHHHhcCCc----EEEeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcc
Q 011979          375 LDLPMKVVDMFGCGLP----VCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGL  448 (473)
Q Consensus       375 e~~p~kv~Eama~G~P----vI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~  448 (473)
                      |+|+++++||||||+|    +|.|..+|..+.+  +.+|++++  |++++|++|.++++.   +++++++..+..++.+.
T Consensus       386 EGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~m---~~~er~~r~~~~~~~v~  460 (797)
T PLN03063        386 DGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEALNM---SDEERETRHRHNFQYVK  460 (797)
T ss_pred             cccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhhh
Confidence            9999999999999999    9999998888875  45789986  799999999999996   57788887777888887


Q ss_pred             ccchHHHHHHHH
Q 011979          449 SARWATEWEEHA  460 (473)
Q Consensus       449 ~~~w~~~~~~~~  460 (473)
                      .++|. .|.+.+
T Consensus       461 ~~~~~-~Wa~~f  471 (797)
T PLN03063        461 THSAQ-KWADDF  471 (797)
T ss_pred             hCCHH-HHHHHH
Confidence            88886 555443

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)

Probab=99.77  E-value=8e-17  Score=164.69  Aligned_cols=248  Identities=16%  Similarity=0.073  Sum_probs=167.2

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH  179 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~  179 (473)
                      .+||+||+|+..  .....+.++++..++|+++..|+...      .....+..    +....+.+.+|.++++|+..++
T Consensus        87 ~~pDvV~~~g~~--~~~~~~~~aa~~~~iPvv~~~~g~~s------~~~~~~~~----~~r~~~~~~ad~~~~~s~~~~~  154 (363)
T cd03786          87 EKPDLVLVLGDT--NETLAAALAAFKLGIPVAHVEAGLRS------FDRGMPDE----ENRHAIDKLSDLHFAPTEEARR  154 (363)
T ss_pred             hCCCEEEEeCCc--hHHHHHHHHHHHcCCCEEEEeccccc------CCCCCCch----HHHHHHHHHhhhccCCCHHHHH
Confidence            689999999743  23334667777789998876665310      00011111    1122345678999999999999


Q ss_pred             HHHHHhCCc---eEEeeCCCCCCcc-cCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCC
Q 011979          180 ELAQNWGIK---ATVLYDQPPEFFH-PTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP  255 (473)
Q Consensus       180 ~l~~~~g~~---~~vi~n~~~~~f~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (473)
                      .+.+ .|.+   +.+++|+..+.+. ..........+..+                                    .+ +
T Consensus       155 ~l~~-~G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~------------------------------------~~-~  196 (363)
T cd03786         155 NLLQ-EGEPPERIFVVGNTMIDALLRLLELAKKELILELL------------------------------------GL-L  196 (363)
T ss_pred             HHHH-cCCCcccEEEECchHHHHHHHHHHhhccchhhhhc------------------------------------cc-C
Confidence            9886 4765   5556665321111 00000000001111                                    12 2


Q ss_pred             CCCeEEEEEeeccC---CCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHH
Q 011979          256 NRPALVVSSTSWTP---DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE  332 (473)
Q Consensus       256 ~~~~~i~~~G~~~~---~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~  332 (473)
                      +++.+++++|+...   .|+++.+++|++.+.+                             +++.+++.|.++..+.++
T Consensus       197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~-----------------------------~~~~vi~~~~~~~~~~l~  247 (363)
T cd03786         197 PKKYILVTLHRVENVDDGEQLEEILEALAELAE-----------------------------EDVPVVFPNHPRTRPRIR  247 (363)
T ss_pred             CCCEEEEEeCCccccCChHHHHHHHHHHHHHHh-----------------------------cCCEEEEECCCChHHHHH
Confidence            35557788888875   7999999999998754                             257888888877778899


Q ss_pred             HHHHHcCC--CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc-CccccceecCCce
Q 011979          333 EKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCIEELVKVDKNG  409 (473)
Q Consensus       333 ~~~~~~~l--~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~-~~~~e~i~~~~~G  409 (473)
                      +.++++++  ++|.|.|+ .+.+++..+|..||++|.   +|.    + .+.|||++|+|||+++. +...+.++.+ .+
T Consensus       248 ~~~~~~~~~~~~v~~~~~-~~~~~~~~l~~~ad~~v~---~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g-~~  317 (363)
T cd03786         248 EAGLEFLGHHPNVLLISP-LGYLYFLLLLKNADLVLT---DSG----G-IQEEASFLGVPVLNLRDRTERPETVESG-TN  317 (363)
T ss_pred             HHHHhhccCCCCEEEECC-cCHHHHHHHHHcCcEEEE---cCc----c-HHhhhhhcCCCEEeeCCCCccchhhhee-eE
Confidence            98888875  78999987 778999999999999998   443    2 47999999999999964 4455666543 34


Q ss_pred             EEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHH
Q 011979          410 LLFS-SSSELADQLLMLFKGFPDDSDVLKKLR  440 (473)
Q Consensus       410 ~~~~-~~~~la~~i~~l~~~~~~~~~~~~~~~  440 (473)
                      ..+. |+++++++|.+++++    +..+++|+
T Consensus       318 ~~~~~~~~~i~~~i~~ll~~----~~~~~~~~  345 (363)
T cd03786         318 VLVGTDPEAILAAIEKLLSD----EFAYSLMS  345 (363)
T ss_pred             EecCCCHHHHHHHHHHHhcC----chhhhcCC
Confidence            4444 699999999999985    56666554

The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase

Probab=99.76  E-value=8.2e-17  Score=165.56  Aligned_cols=270  Identities=16%  Similarity=0.119  Sum_probs=173.6

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      ..+||+||+|+..  .....+.++++..++|++...++..      +.....++...  .......+.||.++++|+..+
T Consensus        84 ~~~pDiv~~~gd~--~~~la~a~aa~~~~ipv~h~~~g~~------s~~~~~~~~~~--~~r~~~~~~ad~~~~~s~~~~  153 (365)
T TIGR00236        84 EEKPDIVLVQGDT--TTTLAGALAAFYLQIPVGHVEAGLR------TGDRYSPMPEE--INRQLTGHIADLHFAPTEQAK  153 (365)
T ss_pred             HcCCCEEEEeCCc--hHHHHHHHHHHHhCCCEEEEeCCCC------cCCCCCCCccH--HHHHHHHHHHHhccCCCHHHH
Confidence            3789999999753  2333577888888999875433321      01111001000  011223346899999999999


Q ss_pred             HHHHHHhCCc---eEEeeCCC-CCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccC
Q 011979          179 HELAQNWGIK---ATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK  254 (473)
Q Consensus       179 ~~l~~~~g~~---~~vi~n~~-~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (473)
                      +.+.+. |.+   +.+++|+. +..+.+........++.+++                                      
T Consensus       154 ~~l~~~-G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~--------------------------------------  194 (365)
T TIGR00236       154 DNLLRE-NVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFG--------------------------------------  194 (365)
T ss_pred             HHHHHc-CCCcccEEEeCChHHHHHHHHHhhccchhHHHhcC--------------------------------------
Confidence            999874 765   56777763 22211111111122222211                                      


Q ss_pred             CCCCeEEEEEe-ec-cCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHH
Q 011979          255 PNRPALVVSST-SW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE  332 (473)
Q Consensus       255 ~~~~~~i~~~G-~~-~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~  332 (473)
                      .+++ ++++.| +. ...|+++.+++|+..+.++                           .|++.++++|.+.. +..+
T Consensus       195 ~~~~-~vl~~~hr~~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~~vi~~~~~~-~~~~  245 (365)
T TIGR00236       195 EDKR-YILLTLHRRENVGEPLENIFKAIREIVEE---------------------------FEDVQIVYPVHLNP-VVRE  245 (365)
T ss_pred             CCCC-EEEEecCchhhhhhHHHHHHHHHHHHHHH---------------------------CCCCEEEEECCCCh-HHHH
Confidence            1233 444444 43 2358899999999998763                           57889998865422 2222


Q ss_pred             HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe-ccCccccceecCCceE
Q 011979          333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKVDKNGL  410 (473)
Q Consensus       333 ~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~-~~~~~~e~i~~~~~G~  410 (473)
                      ++.+.++. ++|.|+|. ++..++..+++.||+++.   +|     |..+.|||+||+|||++ +.++..+.+..+ .|+
T Consensus       246 ~~~~~~~~~~~v~~~~~-~~~~~~~~~l~~ad~vv~---~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~  315 (365)
T TIGR00236       246 PLHKHLGDSKRVHLIEP-LEYLDFLNLAANSHLILT---DS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNK  315 (365)
T ss_pred             HHHHHhCCCCCEEEECC-CChHHHHHHHHhCCEEEE---CC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceE
Confidence            34444555 68999998 889999999999999987   44     34689999999999997 567788888765 454


Q ss_pred             Ee-CCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Q 011979          411 LF-SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI  464 (473)
Q Consensus       411 ~~-~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~  464 (473)
                      ++ .|+++++++|.+++++    ++.+++|+++...+..    ...++++++.|.
T Consensus       316 lv~~d~~~i~~ai~~ll~~----~~~~~~~~~~~~~~g~----~~a~~ri~~~l~  362 (365)
T TIGR00236       316 LVGTDKENITKAAKRLLTD----PDEYKKMSNASNPYGD----GEASERIVEELL  362 (365)
T ss_pred             EeCCCHHHHHHHHHHHHhC----hHHHHHhhhcCCCCcC----chHHHHHHHHHH
Confidence            55 4899999999999985    7888888876644332    345566655554

Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=99.76  E-value=1.2e-15  Score=149.17  Aligned_cols=281  Identities=23%  Similarity=0.299  Sum_probs=192.9

Q ss_pred             CCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCC-chHH-HHHHHHHHHHhhcCCEEEEcCHHHHH
Q 011979          102 PDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRR-SHFV-SIYRWIEKYYGKMANGCLCVTQAMQH  179 (473)
Q Consensus       102 ~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~-~~~~-~~~~~~e~~~~~~ad~vi~vS~~~~~  179 (473)
                      +|+++.+.....+..............+.+...|.............. .... .............++.+++.+.....
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (381)
T COG0438          84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLKKALRLLADRVIAVSPALKE  163 (381)
T ss_pred             cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHHHHHHHHhccccccEEEECCHHHHH
Confidence            588887765444432223344445667888888887421110000000 1111 11112122222247889999998866


Q ss_pred             HHHHHhCC-ceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCC
Q 011979          180 ELAQNWGI-KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR  257 (473)
Q Consensus       180 ~l~~~~g~-~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (473)
                      .+...... +..+++++.. +.+.+.          ..                                    ...++.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~------------------------------------~~~~~~  197 (381)
T COG0438         164 LLEALGVPNKIVVIPNGIDTEKFAPA----------RI------------------------------------GLLPEG  197 (381)
T ss_pred             HHHHhCCCCCceEecCCcCHHHcCcc----------cc------------------------------------CCCccc
Confidence            66654433 3556666532 222211          00                                    111222


Q ss_pred             -CeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC-hHHHHHHH
Q 011979          258 -PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYEEKI  335 (473)
Q Consensus       258 -~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~-~~~l~~~~  335 (473)
                       ...++++|++.+.|+++.+++++..+...                           .+++.++++|.|+. .+.+.+.+
T Consensus       198 ~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~---------------------------~~~~~~~~~g~~~~~~~~~~~~~  250 (381)
T COG0438         198 GKFVVLYVGRLDPEKGLDLLIEAAAKLKKR---------------------------GPDIKLVIVGDGPERREELEKLA  250 (381)
T ss_pred             CceEEEEeeccChhcCHHHHHHHHHHhhhh---------------------------cCCeEEEEEcCCCccHHHHHHHH
Confidence             24899999999999999999999999873                           45589999999987 36677788


Q ss_pred             HHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC-
Q 011979          336 RRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS-  413 (473)
Q Consensus       336 ~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~-  413 (473)
                      ++++. ++|.|.|. ++.+++..+++.||++++   ||..|++|+.++|||++|+|||+++.++..+++.++.+|++++ 
T Consensus       251 ~~~~~~~~v~~~g~-~~~~~~~~~~~~~~~~v~---ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~  326 (381)
T COG0438         251 KKLGLEDNVKFLGY-VPDEELAELLASADVFVL---PSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPP  326 (381)
T ss_pred             HHhCCCCcEEEecc-cCHHHHHHHHHhCCEEEe---ccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCC
Confidence            88887 78999887 887899999999999999   5655999999999999999999999999999998887788665 


Q ss_pred             -CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHHHHH
Q 011979          414 -SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAKPL  463 (473)
Q Consensus       414 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~  463 (473)
                       +.+++++++..+.++    ++.++.+.+++.+.. ..++|+..+++..+.+
T Consensus       327 ~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (381)
T COG0438         327 GDVEELADALEQLLED----PELREELGEAARERVEEEFSWERIAEQLLELY  374 (381)
T ss_pred             CCHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence             489999999999986    566777776444434 5899998886644433

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=99.72  E-value=7.1e-16  Score=172.40  Aligned_cols=166  Identities=12%  Similarity=0.080  Sum_probs=125.0

Q ss_pred             EEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCC----EEEEEEcCC-----CChHH
Q 011979          260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR----LLFIITGKG-----PDKES  330 (473)
Q Consensus       260 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~ivG~g-----~~~~~  330 (473)
                      +++++||+.+.||+..+++|+..+.++                           +|+    ++|+++|.+     +..++
T Consensus       267 ~il~VgRl~~~Kgi~~~l~A~~~ll~~---------------------------~p~~~~~v~lv~v~~~sr~~~~~~~~  319 (726)
T PRK14501        267 IILSIDRLDYTKGIPRRLLAFERFLEK---------------------------NPEWRGKVRLVQVAVPSRTGVPQYQE  319 (726)
T ss_pred             EEEEecCcccccCHHHHHHHHHHHHHh---------------------------CccccCCEEEEEEecCCCcchHHHHH
Confidence            899999999999999999999998663                           454    789888733     33344


Q ss_pred             HHHHHHHc----C-------C-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCC-----cEEE
Q 011979          331 YEEKIRRL----R-------L-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL-----PVCA  393 (473)
Q Consensus       331 l~~~~~~~----~-------l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~-----PvI~  393 (473)
                      +++.++++    +       . +.+.+.|. ++.+++..+|+.||++++   +|..|+||++++||||||+     ||++
T Consensus       320 l~~~~~~~v~~in~~~~~~~~~pv~~~~~~-~~~~~l~~ly~~aDv~v~---~S~~EG~~lv~~Eama~~~~~~g~~vls  395 (726)
T PRK14501        320 MKREIDELVGRINGEFGTVDWTPIHYFYRS-LPFEELVALYRAADVALV---TPLRDGMNLVAKEYVASRTDGDGVLILS  395 (726)
T ss_pred             HHHHHHHHHHHHHhhcCCCCcceEEEEeCC-CCHHHHHHHHHhccEEEe---cccccccCcccceEEEEcCCCCceEEEe
Confidence            55544443    2       1 12345565 999999999999999999   7899999999999999955     6666


Q ss_pred             eccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHH
Q 011979          394 VSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL  463 (473)
Q Consensus       394 ~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  463 (473)
                      ...|+..+++    .|++++  |+++++++|.+++.+   +++++....+.+++...+++|+.-.++.+..+
T Consensus       396 ~~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~~---~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l  460 (726)
T PRK14501        396 EMAGAAAELA----EALLVNPNDIEGIAAAIKRALEM---PEEEQRERMQAMQERLRRYDVHKWASDFLDEL  460 (726)
T ss_pred             cccchhHHhC----cCeEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            6677777764    388886  799999999999986   34455555556777677788866556555444

>TIGR00215 lpxB lipid-A-disaccharide synthase

Probab=99.68  E-value=1.2e-14  Score=151.03  Aligned_cols=315  Identities=13%  Similarity=0.076  Sum_probs=186.2

Q ss_pred             HHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhCCC
Q 011979           23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP  102 (473)
Q Consensus        23 ~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (473)
                      ..+..|.++ |+++.+++..+........ ..+++++.++     ..++....+.+..+.+.+++.    ..++ +..+|
T Consensus        23 al~~~l~~~-~~~~~~~g~gg~~m~~~g~-~~~~~~~~l~-----v~G~~~~l~~~~~~~~~~~~~----~~~l-~~~kP   90 (385)
T TIGR00215        23 GLRQQLKEH-YPNARFIGVAGPRMAAEGC-EVLYSMEELS-----VMGLREVLGRLGRLLKIRKEV----VQLA-KQAKP   90 (385)
T ss_pred             HHHHHHHhc-CCCcEEEEEccHHHHhCcC-ccccChHHhh-----hccHHHHHHHHHHHHHHHHHH----HHHH-HhcCC
Confidence            445566665 8999999866432211111 1123333333     112212222222223333221    1222 34789


Q ss_pred             CEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHH
Q 011979          103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELA  182 (473)
Q Consensus       103 Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~  182 (473)
                      |+|+..+.++++..  ...+++..++|+++++..--+     .+..+         --+.+.+.+|.++|+++..++.+.
T Consensus        91 d~vi~~g~~~~~~~--~a~aa~~~gip~v~~i~P~~w-----aw~~~---------~~r~l~~~~d~v~~~~~~e~~~~~  154 (385)
T TIGR00215        91 DLLVGIDAPDFNLT--KELKKKDPGIKIIYYISPQVW-----AWRKW---------RAKKIEKATDFLLAILPFEKAFYQ  154 (385)
T ss_pred             CEEEEeCCCCccHH--HHHHHhhCCCCEEEEeCCcHh-----hcCcc---------hHHHHHHHHhHhhccCCCcHHHHH
Confidence            99999987666654  223455678999976522111     01111         134556789999999999998877


Q ss_pred             HHhCCceEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEE
Q 011979          183 QNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVV  262 (473)
Q Consensus       183 ~~~g~~~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  262 (473)
                      + .|.+..++.|...+.+.... ..+.+.+.+++                                    ++++++.+++
T Consensus       155 ~-~g~~~~~vGnPv~~~~~~~~-~~~~~~r~~lg------------------------------------l~~~~~~Ilv  196 (385)
T TIGR00215       155 K-KNVPCRFVGHPLLDAIPLYK-PDRKSAREKLG------------------------------------IDHNGETLAL  196 (385)
T ss_pred             h-cCCCEEEECCchhhhccccC-CCHHHHHHHcC------------------------------------CCCCCCEEEE
Confidence            5 57776666554323232110 12233344443                                    3445664555


Q ss_pred             EEe-eccC-CCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEE-cCCCChHHHHHHHHHcC
Q 011979          263 SST-SWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKESYEEKIRRLR  339 (473)
Q Consensus       263 ~~G-~~~~-~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv-G~g~~~~~l~~~~~~~~  339 (473)
                      ..| |..+ .|+...+++|+..+.++                           .|++++++. +.+...+.+++..+.++
T Consensus       197 l~GSR~aei~k~~~~ll~a~~~l~~~---------------------------~p~~~~vi~~~~~~~~~~~~~~~~~~~  249 (385)
T TIGR00215       197 LPGSRGSEVEKLFPLFLKAAQLLEQQ---------------------------EPDLRRVLPVVNFKRRLQFEQIKAEYG  249 (385)
T ss_pred             ECCCCHHHHHHhHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCchhHHHHHHHHHHhC
Confidence            555 5555 68899999999988763                           688888665 45555667777777776


Q ss_pred             C-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec-cCc----------------ccc
Q 011979          340 L-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSC----------------IEE  401 (473)
Q Consensus       340 l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~-~~~----------------~~e  401 (473)
                      . .+|.+.+     .++..+|+.||++|+   +|     |...+|+|++|+|+|.+. .+.                +..
T Consensus       250 ~~~~v~~~~-----~~~~~~l~aADl~V~---~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~n  316 (385)
T TIGR00215       250 PDLQLHLID-----GDARKAMFAADAALL---AS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPN  316 (385)
T ss_pred             CCCcEEEEC-----chHHHHHHhCCEEee---cC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccH
Confidence            5 3566653     356789999999999   45     557779999999999982 222                222


Q ss_pred             ceecCCceEEe--C--CHHHHHHHHHHHHhCCCCCH----HHHHHHHHHHHHhc
Q 011979          402 LVKVDKNGLLF--S--SSSELADQLLMLFKGFPDDS----DVLKKLRNGTLEMG  447 (473)
Q Consensus       402 ~i~~~~~G~~~--~--~~~~la~~i~~l~~~~~~~~----~~~~~~~~~~~~~~  447 (473)
                      ++.+......+  +  +++.+++.+.+++++    +    +.++++.+...+..
T Consensus       317 il~~~~~~pel~q~~~~~~~l~~~~~~ll~~----~~~~~~~~~~~~~~~~~~~  366 (385)
T TIGR00215       317 ILANRLLVPELLQEECTPHPLAIALLLLLEN----GLKAYKEMHRERQFFEELR  366 (385)
T ss_pred             HhcCCccchhhcCCCCCHHHHHHHHHHHhcC----CcccHHHHHHHHHHHHHHH
Confidence            23222111111  1  488999999999985    6    77777777776654

Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A

Probab=99.68  E-value=2.5e-16  Score=138.25  Aligned_cols=130  Identities=28%  Similarity=0.442  Sum_probs=95.0

Q ss_pred             EEEEEeeccCCCCHHHHHH-HHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHHHHc
Q 011979          260 LVVSSTSWTPDEDFGILLE-AALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRL  338 (473)
Q Consensus       260 ~i~~~G~~~~~K~~~~li~-a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~~~  338 (473)
                      .++|+|++.+.|+++.+++ ++..+.++                           .|+++|+|+|.+++  ++++.    
T Consensus         4 ~i~~~g~~~~~k~~~~li~~~~~~l~~~---------------------------~p~~~l~i~G~~~~--~l~~~----   50 (135)
T PF13692_consen    4 YIGYLGRIRPDKGLEELIEAALERLKEK---------------------------HPDIELIIIGNGPD--ELKRL----   50 (135)
T ss_dssp             EEE--S-SSGGGTHHHHHH-HHHHHHHH---------------------------STTEEEEEECESS---HHCCH----
T ss_pred             cccccccccccccccchhhhHHHHHHHH---------------------------CcCEEEEEEeCCHH--HHHHh----
Confidence            8999999999999999999 99999884                           78999999999876  23333    


Q ss_pred             CCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEe-CCHHH
Q 011979          339 RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF-SSSSE  417 (473)
Q Consensus       339 ~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~-~~~~~  417 (473)
                      ..++|+++|. +  +++.++++.||++++|..  .++++|.|++|||++|+|||+++. +..+++.....|+++ +|+++
T Consensus        51 ~~~~v~~~g~-~--~e~~~~l~~~dv~l~p~~--~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~~~~~~~  124 (135)
T PF13692_consen   51 RRPNVRFHGF-V--EELPEILAAADVGLIPSR--FNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLVANDPEE  124 (135)
T ss_dssp             HHCTEEEE-S----HHHHHHHHC-SEEEE-BS--S-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE-TT-HHH
T ss_pred             cCCCEEEcCC-H--HHHHHHHHhCCEEEEEee--CCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEECCCHHH
Confidence            1159999998 6  689999999999999642  455799999999999999999988 566666655666665 47999


Q ss_pred             HHHHHHHHHhC
Q 011979          418 LADQLLMLFKG  428 (473)
Q Consensus       418 la~~i~~l~~~  428 (473)
                      ++++|.++++|
T Consensus       125 l~~~i~~l~~d  135 (135)
T PF13692_consen  125 LAEAIERLLND  135 (135)
T ss_dssp             HHHHHHHHHH-
T ss_pred             HHHHHHHHhcC
Confidence            99999999874

>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1

Probab=99.60  E-value=3.5e-14  Score=152.33  Aligned_cols=162  Identities=19%  Similarity=0.171  Sum_probs=138.8

Q ss_pred             CCeEEEEEe--eccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh---HHH
Q 011979          257 RPALVVSST--SWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---ESY  331 (473)
Q Consensus       257 ~~~~i~~~G--~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~---~~l  331 (473)
                      .+..+++++  |+ ++|.++.+|+|+..+..                           ..|+++|.+.|.|...   +.+
T Consensus       318 ~~~~~I~v~idrL-~ek~~~~~I~av~~~~~---------------------------~~p~~~L~~~gy~~~~~~~~~l  369 (519)
T TIGR03713       318 LYETEIGFWIDGL-SDEELQQILQQLLQYIL---------------------------KNPDYELKILTYNNDNDITQLL  369 (519)
T ss_pred             ccceEEEEEcCCC-ChHHHHHHHHHHHHHHh---------------------------hCCCeEEEEEEecCchhHHHHH
Confidence            344788899  99 99999999999999977                           4799999999988643   556


Q ss_pred             HHHHHHcCCC------------------------------cEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHH
Q 011979          332 EEKIRRLRLK------------------------------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKV  381 (473)
Q Consensus       332 ~~~~~~~~l~------------------------------~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv  381 (473)
                      ++.++++++.                              +|.|.|. .+..++.+.|..+.++|.   .|..++|+ ..
T Consensus       370 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy-~~e~dl~~~~~~arl~id---~s~~eg~~-~~  444 (519)
T TIGR03713       370 EDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAFTTL-TNEEDLISALDKLRLIID---LSKEPDLY-TQ  444 (519)
T ss_pred             HHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEEEec-CCHHHHHHHHhhheEEEE---CCCCCChH-HH
Confidence            5665666333                              8999987 556699999999999999   78999999 99


Q ss_pred             HHHHhcCCcEEEeccCccccceecCCceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHH
Q 011979          382 VDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEE  458 (473)
Q Consensus       382 ~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~  458 (473)
                      +||++.|+|+|   .-|..++|.++.||++++|.++|+++|..++.+    ++.+.++...+.+.+.+|+=++-|++
T Consensus       445 ieAiS~GiPqI---nyg~~~~V~d~~NG~li~d~~~l~~al~~~L~~----~~~wn~~~~~sy~~~~~yS~~~i~~k  514 (519)
T TIGR03713       445 ISGISAGIPQI---NKVETDYVEHNKNGYIIDDISELLKALDYYLDN----LKNWNYSLAYSIKLIDDYSSENIIER  514 (519)
T ss_pred             HHHHHcCCCee---ecCCceeeEcCCCcEEeCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            99999999999   344589999999999999999999999999996    88999999999998878886666644

This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.

>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase

Probab=99.57  E-value=1.5e-12  Score=138.09  Aligned_cols=151  Identities=11%  Similarity=0.065  Sum_probs=119.3

Q ss_pred             EEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCC----EEEEEEcCCC-----C---
Q 011979          260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR----LLFIITGKGP-----D---  327 (473)
Q Consensus       260 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~ivG~g~-----~---  327 (473)
                      ++++++|+...||+...++|+..+.++                           +|+    ++|+++|.+.     .   
T Consensus       287 iIl~VDRLDy~KGI~~kl~Afe~~L~~---------------------------~Pe~~gkv~Lvqi~~psr~~v~~y~~  339 (487)
T TIGR02398       287 LILSAERVDYTKGILEKLNAYERLLER---------------------------RPELLGKVTLVTACVPAASGMTIYDE  339 (487)
T ss_pred             EEEEecccccccCHHHHHHHHHHHHHh---------------------------CccccCceEEEEEeCCCcccchHHHH
Confidence            899999999999999999999998663                           564    7899998763     1   


Q ss_pred             -hHHHHHHHHHc-------CC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCC----cEEEe
Q 011979          328 -KESYEEKIRRL-------RL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL----PVCAV  394 (473)
Q Consensus       328 -~~~l~~~~~~~-------~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~----PvI~~  394 (473)
                       +.++++++.+.       +. +-+.+.+. +|.+++..+|+.||+++.   +|..+|+.++..||+||+.    |+|.|
T Consensus       340 l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~-v~~~el~alYr~ADV~lv---T~lrDGmNLVa~Eyva~~~~~~GvLILS  415 (487)
T TIGR02398       340 LQGQIEQAVGRINGRFARIGWTPLQFFTRS-LPYEEVSAWFAMADVMWI---TPLRDGLNLVAKEYVAAQGLLDGVLVLS  415 (487)
T ss_pred             HHHHHHHHHHHHhhccCCCCCccEEEEcCC-CCHHHHHHHHHhCCEEEE---CccccccCcchhhHHhhhcCCCCCEEEe
Confidence             24445555554       33 34566666 999999999999999999   8999999999999999999    99999


Q ss_pred             ccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          395 SYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       395 ~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      ..+|.++.+   ..+++++  |++++|++|.+.+..   ..+++++-.+...+..
T Consensus       416 efaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~m---~~~Er~~R~~~l~~~v  464 (487)
T TIGR02398       416 EFAGAAVEL---KGALLTNPYDPVRMDETIYVALAM---PKAEQQARMREMFDAV  464 (487)
T ss_pred             ccccchhhc---CCCEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHH
Confidence            998888766   3478886  899999999999997   4445444333333333

Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=99.51  E-value=2.3e-11  Score=125.07  Aligned_cols=306  Identities=13%  Similarity=0.140  Sum_probs=165.6

Q ss_pred             CCeEEEEEecCCCCChhHHHHHHHHHhh---CCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHH
Q 011979            4 RGRACVVVLGDLGRSPRMQYQALSLARQ---MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL   80 (473)
Q Consensus         4 ~~~~~i~~~~~~g~s~r~~~~a~~L~~~---~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~   80 (473)
                      |+++++...|.    ++-.+-|++++++   .||+|.+++..... ..+.....|+.++.++  .....+.. ..+.+..
T Consensus         1 ~~~i~~~~GGT----GGHi~Pala~a~~l~~~g~~v~~vg~~~~~-e~~l~~~~g~~~~~~~--~~~l~~~~-~~~~~~~   72 (352)
T PRK12446          1 MKKIVFTGGGS----AGHVTPNLAIIPYLKEDNWDISYIGSHQGI-EKTIIEKENIPYYSIS--SGKLRRYF-DLKNIKD   72 (352)
T ss_pred             CCeEEEEcCCc----HHHHHHHHHHHHHHHhCCCEEEEEECCCcc-ccccCcccCCcEEEEe--ccCcCCCc-hHHHHHH
Confidence            44555444443    4444444444433   49999999855432 3344455578888777  22111110 1122233


Q ss_pred             HHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHH
Q 011979           81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIE  160 (473)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e  160 (473)
                      ..+.++..+... .++ +..+||+|+.++.  ..+. .+.+++++.++|++++-.+..       .+          ...
T Consensus        73 ~~~~~~~~~~~~-~i~-~~~kPdvvi~~Gg--y~s~-p~~~aa~~~~~p~~i~e~n~~-------~g----------~~n  130 (352)
T PRK12446         73 PFLVMKGVMDAY-VRI-RKLKPDVIFSKGG--FVSV-PVVIGGWLNRVPVLLHESDMT-------PG----------LAN  130 (352)
T ss_pred             HHHHHHHHHHHH-HHH-HhcCCCEEEecCc--hhhH-HHHHHHHHcCCCEEEECCCCC-------cc----------HHH
Confidence            333333222222 222 3489999999873  2222 356778888999887555441       11          223


Q ss_pred             HHHhhcCCEEEEcCHHHHHHHHHHhCCceEEeeCCCC--CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCc
Q 011979          161 KYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPP--EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA  238 (473)
Q Consensus       161 ~~~~~~ad~vi~vS~~~~~~l~~~~g~~~~vi~n~~~--~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  238 (473)
                      +.+.++++.+++.=+...+.+    ..+ .++..|+|  +.|....   +...+..++                      
T Consensus       131 r~~~~~a~~v~~~f~~~~~~~----~~~-k~~~tG~Pvr~~~~~~~---~~~~~~~~~----------------------  180 (352)
T PRK12446        131 KIALRFASKIFVTFEEAAKHL----PKE-KVIYTGSPVREEVLKGN---REKGLAFLG----------------------  180 (352)
T ss_pred             HHHHHhhCEEEEEccchhhhC----CCC-CeEEECCcCCccccccc---chHHHHhcC----------------------
Confidence            455677888776544333222    211 23344433  3332111   112222222                      


Q ss_pred             cchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEE
Q 011979          239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL  318 (473)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (473)
                                    +.+++|.++++.|+.+...=-+.+.+++..+.                              .++.
T Consensus       181 --------------l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~------------------------------~~~~  216 (352)
T PRK12446        181 --------------FSRKKPVITIMGGSLGAKKINETVREALPELL------------------------------LKYQ  216 (352)
T ss_pred             --------------CCCCCcEEEEECCccchHHHHHHHHHHHHhhc------------------------------cCcE
Confidence                          34567778888898875332233333343332                              1354


Q ss_pred             EE-EEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC
Q 011979          319 FI-ITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS  397 (473)
Q Consensus       319 l~-ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~  397 (473)
                      ++ ++|...    +++.....  +++...++ + .++++.+|..||++|+   . .|   ++++.|++++|+|+|.....
T Consensus       217 vv~~~G~~~----~~~~~~~~--~~~~~~~f-~-~~~m~~~~~~adlvIs---r-~G---~~t~~E~~~~g~P~I~iP~~  281 (352)
T PRK12446        217 IVHLCGKGN----LDDSLQNK--EGYRQFEY-V-HGELPDILAITDFVIS---R-AG---SNAIFEFLTLQKPMLLIPLS  281 (352)
T ss_pred             EEEEeCCch----HHHHHhhc--CCcEEecc-h-hhhHHHHHHhCCEEEE---C-CC---hhHHHHHHHcCCCEEEEcCC
Confidence            44 456432    33322222  24445555 1 2689999999999997   2 22   45899999999999998642


Q ss_pred             ---------ccccceecCCceEEeC----CHHHHHHHHHHHHhC
Q 011979          398 ---------CIEELVKVDKNGLLFS----SSSELADQLLMLFKG  428 (473)
Q Consensus       398 ---------~~~e~i~~~~~G~~~~----~~~~la~~i~~l~~~  428 (473)
                               ...+.+.+.+.|..+.    +++.+.+.+.+++++
T Consensus       282 ~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~  325 (352)
T PRK12446        282 KFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHN  325 (352)
T ss_pred             CCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcC
Confidence                     1223454555666653    488999999999874

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

Probab=99.50  E-value=5.5e-11  Score=121.97  Aligned_cols=314  Identities=18%  Similarity=0.190  Sum_probs=179.8

Q ss_pred             CCChhHHHHHHHHHhhCCCc-EEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 011979           16 GRSPRMQYQALSLARQMSLE-VDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWF   94 (473)
Q Consensus        16 g~s~r~~~~a~~L~~~~g~e-V~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (473)
                      |+-.--.-.+..|.++ |++ |.++... ......+....+++++.++.  ....+...+. .+...++.++-..... .
T Consensus        12 GHv~pAlAl~~~l~~~-g~~~v~~~~~~-~~~e~~l~~~~~~~~~~I~~--~~~~~~~~~~-~~~~~~~~~~~~~~a~-~   85 (357)
T COG0707          12 GHVFPALALAEELAKR-GWEQVIVLGTG-DGLEAFLVKQYGIEFELIPS--GGLRRKGSLK-LLKAPFKLLKGVLQAR-K   85 (357)
T ss_pred             cchhHHHHHHHHHHhh-CccEEEEeccc-ccceeeeccccCceEEEEec--ccccccCcHH-HHHHHHHHHHHHHHHH-H
Confidence            3333333445566665 995 5555332 22333455566899999983  2222211111 1222222222211111 1


Q ss_pred             HhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcC
Q 011979           95 LCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT  174 (473)
Q Consensus        95 ~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS  174 (473)
                      ++ +..+||+|+..++  .++. .+.++++..++|++.+..|.       ..+          ...+...+.|+.|.+.-
T Consensus        86 il-~~~kPd~vig~Gg--yvs~-P~~~Aa~~~~iPv~ihEqn~-------~~G----------~ank~~~~~a~~V~~~f  144 (357)
T COG0707          86 IL-KKLKPDVVIGTGG--YVSG-PVGIAAKLLGIPVIIHEQNA-------VPG----------LANKILSKFAKKVASAF  144 (357)
T ss_pred             HH-HHcCCCEEEecCC--cccc-HHHHHHHhCCCCEEEEecCC-------Ccc----------hhHHHhHHhhceeeecc
Confidence            22 3489999998663  3333 25566777789999988887       222          11233445566666554


Q ss_pred             HHHHHHHHHHhCCceEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccC
Q 011979          175 QAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK  254 (473)
Q Consensus       175 ~~~~~~l~~~~g~~~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (473)
                      +.......+   .+..+.-+.....|... .....+.                                        ...
T Consensus       145 ~~~~~~~~~---~~~~~tG~Pvr~~~~~~-~~~~~~~----------------------------------------~~~  180 (357)
T COG0707         145 PKLEAGVKP---ENVVVTGIPVRPEFEEL-PAAEVRK----------------------------------------DGR  180 (357)
T ss_pred             ccccccCCC---CceEEecCcccHHhhcc-chhhhhh----------------------------------------hcc
Confidence            431111100   01222222111222211 1011100                                        111


Q ss_pred             CCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEE-cCCCChHHHHH
Q 011979          255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKESYEE  333 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv-G~g~~~~~l~~  333 (473)
                      .+++.++++.|+.+...--+.+.+++..+.+                              ++.++.. |.+. .+++++
T Consensus       181 ~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~------------------------------~~~v~~~~G~~~-~~~~~~  229 (357)
T COG0707         181 LDKKTILVTGGSQGAKALNDLVPEALAKLAN------------------------------RIQVIHQTGKND-LEELKS  229 (357)
T ss_pred             CCCcEEEEECCcchhHHHHHHHHHHHHHhhh------------------------------CeEEEEEcCcch-HHHHHH
Confidence            2567788888998766644444444444432                              4555444 4433 556666


Q ss_pred             HHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCcc--------ccceec
Q 011979          334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI--------EELVKV  405 (473)
Q Consensus       334 ~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~--------~e~i~~  405 (473)
                      ....++.  +.+.++   .++++.+|+.||+.|+    -.|   ++++.|..++|+|+|-.+.+..        +..+.+
T Consensus       230 ~~~~~~~--~~v~~f---~~dm~~~~~~ADLvIs----RaG---a~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~  297 (357)
T COG0707         230 AYNELGV--VRVLPF---IDDMAALLAAADLVIS----RAG---ALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEK  297 (357)
T ss_pred             HHhhcCc--EEEeeH---HhhHHHHHHhccEEEe----CCc---ccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHh
Confidence            6666664  888888   8999999999999997    333   3599999999999999875433        344555


Q ss_pred             CCceEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          406 DKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       406 ~~~G~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      .+.|.+..    +++.+.+.|.+++++    ++..++|++++++..
T Consensus       298 ~gaa~~i~~~~lt~~~l~~~i~~l~~~----~~~l~~m~~~a~~~~  339 (357)
T COG0707         298 AGAALVIRQSELTPEKLAELILRLLSN----PEKLKAMAENAKKLG  339 (357)
T ss_pred             CCCEEEeccccCCHHHHHHHHHHHhcC----HHHHHHHHHHHHhcC
Confidence            66677775    377999999999985    899999999999976

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.42  E-value=6.8e-11  Score=133.17  Aligned_cols=164  Identities=10%  Similarity=0.115  Sum_probs=126.2

Q ss_pred             EEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEE--EEEE-------cCCCChHH
Q 011979          260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL--FIIT-------GKGPDKES  330 (473)
Q Consensus       260 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~iv-------G~g~~~~~  330 (473)
                      ++++++|+...||+...++|+..+.++                           +|+++  ++++       |++++.+.
T Consensus       365 iIlgVDRLD~~KGI~~kL~AfE~fL~~---------------------------~Pe~r~kVVLvQIa~psr~~v~eY~~  417 (934)
T PLN03064        365 VMLGVDRLDMIKGIPQKILAFEKFLEE---------------------------NPEWRDKVVLLQIAVPTRTDVPEYQK  417 (934)
T ss_pred             EEEEeeccccccCHHHHHHHHHHHHHh---------------------------CccccCCEEEEEEcCCCCCCcHHHHH
Confidence            999999999999999999999987663                           67653  5666       55554444


Q ss_pred             HHHHH----HHcCC-------CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCC----cEEEec
Q 011979          331 YEEKI----RRLRL-------KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL----PVCAVS  395 (473)
Q Consensus       331 l~~~~----~~~~l-------~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~----PvI~~~  395 (473)
                      ++..+    .+.+-       .-|.++..-++.+++..+|+.||++++   +|..+|++++..|||+|+.    ++|.|.
T Consensus       418 l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lv---TslrDGmNLva~Eyva~~~~~~GvLILSE  494 (934)
T PLN03064        418 LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALV---TSLRDGMNLVSYEFVACQDSKKGVLILSE  494 (934)
T ss_pred             HHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEe---CccccccCchHHHHHHhhcCCCCCeEEeC
Confidence            44433    33331       125655555899999999999999999   8999999999999999944    444488


Q ss_pred             cCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHH
Q 011979          396 YSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEH  459 (473)
Q Consensus       396 ~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~  459 (473)
                      .+|.++.+  +..+++++  |.+++|++|.+++..   +++++++..+..++.+..++| +.|-+.
T Consensus       495 faGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~M---~~~Er~~r~~~~~~~V~~~d~-~~Wa~~  554 (934)
T PLN03064        495 FAGAAQSL--GAGAILVNPWNITEVAASIAQALNM---PEEEREKRHRHNFMHVTTHTA-QEWAET  554 (934)
T ss_pred             CCchHHHh--CCceEEECCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHhhcccCCH-HHHHHH
Confidence            88877777  44678886  799999999999986   588888888888888877776 445444

>TIGR02094 more_P_ylases alpha-glucan phosphorylases

Probab=99.35  E-value=1.4e-09  Score=118.54  Aligned_cols=184  Identities=11%  Similarity=0.017  Sum_probs=136.7

Q ss_pred             cCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC-----
Q 011979          253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-----  327 (473)
Q Consensus       253 ~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~-----  327 (473)
                      +.++.+ ++++++|+..+|+++++++++..+.+-+                   .+    ...++.|++.|+|..     
T Consensus       385 ~dpd~~-~ig~v~Rl~~yKr~dLil~~i~~l~~i~-------------------~~----~~~pvq~V~~Gka~p~d~~g  440 (601)
T TIGR02094       385 LDPDVL-TIGFARRFATYKRADLIFRDLERLARIL-------------------NN----PERPVQIVFAGKAHPADGEG  440 (601)
T ss_pred             cCCCCc-EEEEEEcchhhhhHHHHHHHHHHHHHHh-------------------hC----CCCCeEEEEEEecCcccchH
Confidence            456666 9999999999999999999988876410                   00    013589999999853     


Q ss_pred             ---hHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCC-CCCCcHHHHHHHhcCCcEEEeccCccccc
Q 011979          328 ---KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIEEL  402 (473)
Q Consensus       328 ---~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~-~e~~p~kv~Eama~G~PvI~~~~~~~~e~  402 (473)
                         .+.+.+.+++... ++|.|+-. .+.+-...++..||++++-  ||. .|.+|+.-+=||..|.+.+++-.|...|.
T Consensus       441 k~~i~~i~~la~~~~~~~kv~f~~~-Yd~~lA~~i~aG~Dv~L~~--Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~  517 (601)
T TIGR02094       441 KEIIQRIVEFSKRPEFRGRIVFLEN-YDINLARYLVSGVDVWLNN--PRRPLEASGTSGMKAAMNGVLNLSILDGWWGEG  517 (601)
T ss_pred             HHHHHHHHHHHhcccCCCCEEEEcC-CCHHHHHHHhhhheeEEeC--CCCCcCCchHHHHHHHHcCCceeecccCccccc
Confidence               2334444444223 58888866 6777788899999999992  455 89999999999999999999987777776


Q ss_pred             eecCCceEEeC--------------CHHHHHHHHHHHH-hCCCCC-----HHHHHHHHHHHHHhc-cccchHHHHHHHHH
Q 011979          403 VKVDKNGLLFS--------------SSSELADQLLMLF-KGFPDD-----SDVLKKLRNGTLEMG-LSARWATEWEEHAK  461 (473)
Q Consensus       403 i~~~~~G~~~~--------------~~~~la~~i~~l~-~~~~~~-----~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~  461 (473)
                      . ++.|||.+.              |.++|.++|.+.+ .-+-++     |..+.+|.+++.... ..++|+.+.+++..
T Consensus       518 ~-~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~  596 (601)
T TIGR02094       518 Y-DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVD  596 (601)
T ss_pred             C-CCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHH
Confidence            6 678999986              3778888886654 222112     456778877777642 46999999999887


Q ss_pred             HHH
Q 011979          462 PLI  464 (473)
Q Consensus       462 ~~~  464 (473)
                      .++
T Consensus       597 ~yy  599 (601)
T TIGR02094       597 KFY  599 (601)
T ss_pred             HhC
Confidence            664

This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A

Probab=99.32  E-value=1e-11  Score=110.27  Aligned_cols=152  Identities=21%  Similarity=0.274  Sum_probs=85.5

Q ss_pred             hhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhh
Q 011979           19 PRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVK   98 (473)
Q Consensus        19 ~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (473)
                      ..+..++..|+++ ||+|+|+++....... .....++.+++++....  ............+.+++          ..+
T Consensus         5 ~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l----------~~~   70 (160)
T PF13579_consen    5 RYVRELARALAAR-GHEVTVVTPQPDPEDD-EEEEDGVRVHRLPLPRR--PWPLRLLRFLRRLRRLL----------AAR   70 (160)
T ss_dssp             HHHHHHHHHHHHT-T-EEEEEEE---GGG--SEEETTEEEEEE--S-S--SSGGGHCCHHHHHHHHC----------HHC
T ss_pred             HHHHHHHHHHHHC-CCEEEEEecCCCCccc-ccccCCceEEeccCCcc--chhhhhHHHHHHHHHHH----------hhh
Confidence            3455677888887 9999999977655432 24467899999983222  11111112221111111          113


Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCC-CchHHHHHHHHHHHHhhcCCEEEEcCHHH
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRWIEKYYGKMANGCLCVTQAM  177 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~ad~vi~vS~~~  177 (473)
                      ..+||+||++++   ....++.++++..++|+|+++|+...       .. ......+++++++.+.+.||.++++|+.+
T Consensus        71 ~~~~Dvv~~~~~---~~~~~~~~~~~~~~~p~v~~~h~~~~-------~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~  140 (160)
T PF13579_consen   71 RERPDVVHAHSP---TAGLVAALARRRRGIPLVVTVHGTLF-------RRGSRWKRRLYRWLERRLLRRADRVIVVSEAM  140 (160)
T ss_dssp             T---SEEEEEHH---HHHHHHHHHHHHHT--EEEE-SS-T-------------HHHHHHHHHHHHHHHH-SEEEESSHHH
T ss_pred             ccCCeEEEeccc---chhHHHHHHHHccCCcEEEEECCCch-------hhccchhhHHHHHHHHHHHhcCCEEEECCHHH
Confidence            478999999993   34445666666678999999998632       12 33445677888999999999999999999


Q ss_pred             HHHHHHHhCCc---eEEeeCC
Q 011979          178 QHELAQNWGIK---ATVLYDQ  195 (473)
Q Consensus       178 ~~~l~~~~g~~---~~vi~n~  195 (473)
                      ++.+.+ +|.+   +.|+|||
T Consensus       141 ~~~l~~-~g~~~~ri~vipnG  160 (160)
T PF13579_consen  141 RRYLRR-YGVPPDRIHVIPNG  160 (160)
T ss_dssp             HHHHHH-H---GGGEEE----
T ss_pred             HHHHHH-hCCCCCcEEEeCcC
Confidence            999998 7765   8999886

>TIGR03492 conserved hypothetical protein

Probab=99.26  E-value=3.3e-09  Score=110.84  Aligned_cols=250  Identities=14%  Similarity=0.144  Sum_probs=150.2

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEE-EecCchhhhhhhh-cCCCchHHHH-----HHH-HHHHHhhcCCEEE
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV-DWHNFGYTLLSLS-LGRRSHFVSI-----YRW-IEKYYGKMANGCL  171 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~-~~h~~~~~~~~~~-~~~~~~~~~~-----~~~-~e~~~~~~ad~vi  171 (473)
                      .+||+|++.+-.      +..+++++.++|+++ -.|.-.+...+.. ......+.++     .-| -.+...+.|+.++
T Consensus        92 ~~p~~v~~~Gg~------v~~~aA~~~~~p~~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~p~e~n~l~~~~a~~v~  165 (396)
T TIGR03492        92 KKGDLIVAVGDI------VPLLFAWLSGKPYAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPWERWLMRSRRCLAVF  165 (396)
T ss_pred             hcCCEEEEECcH------HHHHHHHHcCCCceEEEeeccceeecCCCCCccchhhhccCCCccCHHHHHHhhchhhCEEe
Confidence            389999988732      133455667888766 3343321100000 0000000000     001 1345557899999


Q ss_pred             EcCHHHHHHHHHHhCCceEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccccccc
Q 011979          172 CVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV  251 (473)
Q Consensus       172 ~vS~~~~~~l~~~~g~~~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (473)
                      +..+...+.+.+ .|.++.++=|...+.+.....   .                                          
T Consensus       166 ~~~~~t~~~l~~-~g~k~~~vGnPv~d~l~~~~~---~------------------------------------------  199 (396)
T TIGR03492       166 VRDRLTARDLRR-QGVRASYLGNPMMDGLEPPER---K------------------------------------------  199 (396)
T ss_pred             CCCHHHHHHHHH-CCCeEEEeCcCHHhcCccccc---c------------------------------------------
Confidence            999999988875 577654443332122211100   0                                          


Q ss_pred             ccCCCCCeEEEEEeeccC--CCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEc-CCCCh
Q 011979          252 FLKPNRPALVVSSTSWTP--DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KGPDK  328 (473)
Q Consensus       252 ~~~~~~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG-~g~~~  328 (473)
                      .+.++.+.+++..|+-..  .+++..+++++..+.+                           . +++.+++.- .+.+.
T Consensus       200 ~l~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~---------------------------~-~~~~~v~~~~~~~~~  251 (396)
T TIGR03492       200 PLLTGRFRIALLPGSRPPEAYRNLKLLLRALEALPD---------------------------S-QPFVFLAAIVPSLSL  251 (396)
T ss_pred             ccCCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhh---------------------------C-CCeEEEEEeCCCCCH
Confidence            123345557777787744  3567799999998865                           2 567776654 45566


Q ss_pred             HHHHHHHHHcCCC---------------cEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEE
Q 011979          329 ESYEEKIRRLRLK---------------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA  393 (473)
Q Consensus       329 ~~l~~~~~~~~l~---------------~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~  393 (473)
                      +.+++.+++.+..               ++.+..+   ..++..+|+.||++|+   . +    |....|++++|+|+|.
T Consensus       252 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~l~~ADlvI~---r-S----Gt~T~E~a~lg~P~Il  320 (396)
T TIGR03492       252 EKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLG---RGAFAEILHWADLGIA---M-A----GTATEQAVGLGKPVIQ  320 (396)
T ss_pred             HHHHHHHHhcCceecCCccccchhhccCceEEEec---hHhHHHHHHhCCEEEE---C-c----CHHHHHHHHhCCCEEE
Confidence            7777777665542               2666655   6789999999999998   3 2    2466999999999999


Q ss_pred             eccCcc---ccceec-----CCceEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011979          394 VSYSCI---EELVKV-----DKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTL  444 (473)
Q Consensus       394 ~~~~~~---~e~i~~-----~~~G~~~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~  444 (473)
                      ....+-   ..+...     +....+.+ +++.+++.+..++++    ++.+++|.+++.
T Consensus       321 ip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d----~~~~~~~~~~~~  376 (396)
T TIGR03492       321 LPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLAD----PELLERCRRNGQ  376 (396)
T ss_pred             EeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHH
Confidence            974322   122222     22223334 589999999999985    888888875443

This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.

>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1

Probab=99.24  E-value=3.8e-11  Score=98.96  Aligned_cols=86  Identities=16%  Similarity=0.320  Sum_probs=78.6

Q ss_pred             CCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cc
Q 011979          371 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LS  449 (473)
Q Consensus       371 ~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~  449 (473)
                      ++...+++++++|+||||+|||+.+.++..+++.++..++.++|++++.+++..++++    ++.++++++++++.. +.
T Consensus         5 ~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~ll~~----~~~~~~ia~~a~~~v~~~   80 (92)
T PF13524_consen    5 PSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYNDPEELAEKIEYLLEN----PEERRRIAKNARERVLKR   80 (92)
T ss_pred             CCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEECCHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHh
Confidence            4555778999999999999999999999999999999999999999999999999995    999999999999988 58


Q ss_pred             cchHHHHHHHH
Q 011979          450 ARWATEWEEHA  460 (473)
Q Consensus       450 ~~w~~~~~~~~  460 (473)
                      ++|++.|++.+
T Consensus        81 ~t~~~~~~~il   91 (92)
T PF13524_consen   81 HTWEHRAEQIL   91 (92)
T ss_pred             CCHHHHHHHHH
Confidence            99999998865

>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3

Probab=99.19  E-value=1.3e-08  Score=108.38  Aligned_cols=274  Identities=19%  Similarity=0.177  Sum_probs=153.9

Q ss_pred             HHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCc-eEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcC
Q 011979          157 RWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGME  234 (473)
Q Consensus       157 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g~~-~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  234 (473)
                      ..+|+.....||+..+||+-++.+-+...+.+ =.|+|||-. ++|....  +.++++.....++      .+++.    
T Consensus       212 ~~iEraaA~~AdvFTTVSeITa~Ea~~LL~r~pDvV~pNGl~v~~~~~~~--efqnl~~~~k~ki------~~fv~----  279 (633)
T PF05693_consen  212 HSIERAAAHYADVFTTVSEITAKEAEHLLKRKPDVVTPNGLNVDKFPALH--EFQNLHAKAKEKI------HEFVR----  279 (633)
T ss_dssp             HHHHHHHHHHSSEEEESSHHHHHHHHHHHSS--SEE----B-GGGTSSTT--HHHHHHHHHHHHH------HHHHH----
T ss_pred             HHHHHHHHHhcCeeeehhhhHHHHHHHHhCCCCCEEcCCCccccccccch--HHHHHHHHHHHHH------HHHHH----
Confidence            56799999999999999999998888777766 478899944 5554332  2222222111110      01110    


Q ss_pred             CCCccchhhhcccccccccCCCCCeEEEEEeeccC-CCCHHHHHHHHHHhHHHHHhh----------hccC--CCchhh-
Q 011979          235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAI----------LNED--DSTNEE-  300 (473)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~-~K~~~~li~a~~~l~~~~~~~----------~~~~--~~~~~~-  300 (473)
                            .+|..    ...+.+++..+++.+||... .||+|.+|+|+..+..+++..          .--+  .+-|-| 
T Consensus       280 ------~~f~g----~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~  349 (633)
T PF05693_consen  280 ------GHFYG----HYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVES  349 (633)
T ss_dssp             ------HHSTT-------S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHH
T ss_pred             ------HHhcc----cCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHH
Confidence                  11111    11234456668888899865 699999999999987753221          0000  000111 


Q ss_pred             ----------------------------------------------HHHhhhcc-CccccCCCEEEEEEcCCCChHHHHH
Q 011979          301 ----------------------------------------------VFLKEISD-GKQYLYPRLLFIITGKGPDKESYEE  333 (473)
Q Consensus       301 ----------------------------------------------~~~~~~~~-~~~~~~~~~~l~ivG~g~~~~~l~~  333 (473)
                                                                    +.+|.+.- .+.-..|.+.=...- ....+.+..
T Consensus       350 l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~-d~~~DpILn  428 (633)
T PF05693_consen  350 LKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLH-DDSNDPILN  428 (633)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEET-TTTT-HHHH
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCC-CCccCHHHH
Confidence                                                          11111110 000011212111121 233567888


Q ss_pred             HHHHcCCC-------cEEEecCCCCcc------cHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccc
Q 011979          334 KIRRLRLK-------RVAFRTMWLSAE------DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE  400 (473)
Q Consensus       334 ~~~~~~l~-------~V~~~g~~v~~~------~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~  400 (473)
                      .++++++.       +|.|++-+++..      ++.+++..+|++|+   ||+.|++|..-+|+.++|+|.|+|+.+|..
T Consensus       429 ~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvF---PSYYEPWGYTPlE~~a~gVPsITTnLsGFG  505 (633)
T PF05693_consen  429 MIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVF---PSYYEPWGYTPLECTAFGVPSITTNLSGFG  505 (633)
T ss_dssp             HHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE-----SSBSS-HHHHHHHHTT--EEEETTBHHH
T ss_pred             HHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeee---ccccccccCChHHHhhcCCceeeccchhHH
Confidence            89998872       377777766543      78999999999999   899999999999999999999999987766


Q ss_pred             cceec-----CCceEEe-C----C----HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHH
Q 011979          401 ELVKV-----DKNGLLF-S----S----SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEH  459 (473)
Q Consensus       401 e~i~~-----~~~G~~~-~----~----~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~  459 (473)
                      -++.+     ...|+.+ +    +    ++++++.|.++...   ++..+..+++++.+.+....|..-...+
T Consensus       506 ~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~---~~rqri~~Rn~ae~LS~~~dW~~~~~yY  575 (633)
T PF05693_consen  506 CWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQL---SRRQRIIQRNRAERLSDLADWKNFGKYY  575 (633)
T ss_dssp             HHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT-----HHHHHHHHHHHHHHGGGGBHHHHCHHH
T ss_pred             HHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence            44432     3456665 2    3    56666777777665   6778889999999999899998644333

Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.

>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A

Probab=99.18  E-value=3.2e-10  Score=102.40  Aligned_cols=165  Identities=23%  Similarity=0.351  Sum_probs=84.3

Q ss_pred             EecCCCCChhHHHH-HHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHH
Q 011979           11 VLGDLGRSPRMQYQ-ALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFF   89 (473)
Q Consensus        11 ~~~~~g~s~r~~~~-a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (473)
                      .....||.+++... +..|+++ ||+|+|++..........    ........  .. .. .......+....+      
T Consensus         7 ~~~~~GG~e~~~~~l~~~l~~~-G~~v~v~~~~~~~~~~~~----~~~~~~~~--~~-~~-~~~~~~~~~~~~~------   71 (177)
T PF13439_consen    7 FLPNIGGAERVVLNLARALAKR-GHEVTVVSPGVKDPIEEE----LVKIFVKI--PY-PI-RKRFLRSFFFMRR------   71 (177)
T ss_dssp             -TTSSSHHHHHHHHHHHHHHHT-T-EEEEEESS-TTS-SST----EEEE---T--T--SS-TSS--HHHHHHHH------
T ss_pred             cCCCCChHHHHHHHHHHHHHHC-CCEEEEEEcCCCccchhh----ccceeeee--ec-cc-ccccchhHHHHHH------
Confidence            34556777776654 4566665 999999997755432111    11111111  11 01 1111111111111      


Q ss_pred             HHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCE
Q 011979           90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANG  169 (473)
Q Consensus        90 ~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~  169 (473)
                        +..++ +..+||+||++.+......   .+...  ++|++++.|+.+.. ........+....+...+++...+.+|.
T Consensus        72 --~~~~i-~~~~~DiVh~~~~~~~~~~---~~~~~--~~~~v~~~H~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (177)
T PF13439_consen   72 --LRRLI-KKEKPDIVHIHGPPAFWIA---LLACR--KVPIVYTIHGPYFE-RRFLKSKLSPYSYLNFRIERKLYKKADR  142 (177)
T ss_dssp             --HHHHH-HHHT-SEEECCTTHCCCHH---HHHHH--CSCEEEEE-HHH---HHTTTTSCCCHHHHHHCTTHHHHCCSSE
T ss_pred             --HHHHH-HHcCCCeEEecccchhHHH---HHhcc--CCCEEEEeCCCccc-ccccccccchhhhhhhhhhhhHHhcCCE
Confidence              11222 2269999999985443322   22222  89999999998521 0001123444445555556677889999


Q ss_pred             EEEcCHHHHHHHHHHhCCc---eEEeeCC-CCCCc
Q 011979          170 CLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFF  200 (473)
Q Consensus       170 vi~vS~~~~~~l~~~~g~~---~~vi~n~-~~~~f  200 (473)
                      ++|+|+.+++.+.+ +|++   +.||||| +.+.|
T Consensus       143 ii~vS~~~~~~l~~-~~~~~~ki~vI~ngid~~~F  176 (177)
T PF13439_consen  143 IIAVSESTKDELIK-FGIPPEKIHVIYNGIDTDRF  176 (177)
T ss_dssp             EEESSHHHHHHHHH-HT--SS-EEE----B-CCCH
T ss_pred             EEEECHHHHHHHHH-hCCcccCCEEEECCccHHHc
Confidence            99999999999999 8864   8999999 55655

>TIGR02919 accessory Sec system glycosyltransferase GtfB

Probab=99.12  E-value=6.6e-09  Score=109.46  Aligned_cols=130  Identities=13%  Similarity=0.154  Sum_probs=104.5

Q ss_pred             HHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC-hHHHHHHHHHcCCCcEEEecCCCCc
Q 011979          274 GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYEEKIRRLRLKRVAFRTMWLSA  352 (473)
Q Consensus       274 ~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~-~~~l~~~~~~~~l~~V~~~g~~v~~  352 (473)
                      +..|+++..+.+.                           .|++.|.| |.+.+ ...+.++ .++  +||..... ...
T Consensus       291 s~~I~~i~~Lv~~---------------------------lPd~~f~I-ga~te~s~kL~~L-~~y--~nvvly~~-~~~  338 (438)
T TIGR02919       291 SDQIEHLEEIVQA---------------------------LPDYHFHI-AALTEMSSKLMSL-DKY--DNVKLYPN-ITT  338 (438)
T ss_pred             HHHHHHHHHHHHh---------------------------CCCcEEEE-EecCcccHHHHHH-Hhc--CCcEEECC-cCh
Confidence            8899999999884                           79999999 88776 6677777 666  46666665 556


Q ss_pred             ccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc-CccccceecCCceEEeC--CHHHHHHHHHHHHhCC
Q 011979          353 EDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCIEELVKVDKNGLLFS--SSSELADQLLMLFKGF  429 (473)
Q Consensus       353 ~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~-~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~  429 (473)
                      .++.++|..||+++.   .|.++++++.+.||++.|+||++-+. .+..+++.+   |.+++  ++++++++|..++.+ 
T Consensus       339 ~~l~~ly~~~dlyLd---in~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL~d-  411 (438)
T TIGR02919       339 QKIQELYQTCDIYLD---INHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLLND-  411 (438)
T ss_pred             HHHHHHHHhccEEEE---ccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHhcC-
Confidence            789999999999999   89999999999999999999999974 455676755   67765  699999999999985 


Q ss_pred             CCCHHHHHHHHHHHHH
Q 011979          430 PDDSDVLKKLRNGTLE  445 (473)
Q Consensus       430 ~~~~~~~~~~~~~~~~  445 (473)
                         ++..++.-..-++
T Consensus       412 ---~~~~~~~~~~q~~  424 (438)
T TIGR02919       412 ---PNQFRELLEQQRE  424 (438)
T ss_pred             ---HHHHHHHHHHHHH
Confidence               6665554444444

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]

Probab=99.11  E-value=3.1e-07  Score=94.29  Aligned_cols=259  Identities=20%  Similarity=0.250  Sum_probs=172.5

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchH-HHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      .+||++++-..-.+|.++   .-++.+++|+++---         +...+|.- ......+.+.+.+..|.|++.|+..+
T Consensus       122 ~~P~l~Ii~EtElWPnli---~e~~~~~~p~~LvNa---------RLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~  189 (419)
T COG1519         122 WRPKLLIIMETELWPNLI---NELKRRGIPLVLVNA---------RLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDA  189 (419)
T ss_pred             cCCCEEEEEeccccHHHH---HHHHHcCCCEEEEee---------eechhhhHHHHHHHHHHHHHHHhcceeeecCHHHH
Confidence            789988887767777663   335567888765211         11111111 12233455566677899999999999


Q ss_pred             HHHHHHhCCceEEeeCCCCCCcccC---ChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCC
Q 011979          179 HELAQNWGIKATVLYDQPPEFFHPT---SLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP  255 (473)
Q Consensus       179 ~~l~~~~g~~~~vi~n~~~~~f~~~---~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (473)
                      +.+.+ .|.+. |.-.|...+.-..   ...+...++..++                                      .
T Consensus       190 ~Rf~~-LGa~~-v~v~GNlKfd~~~~~~~~~~~~~~r~~l~--------------------------------------~  229 (419)
T COG1519         190 QRFRS-LGAKP-VVVTGNLKFDIEPPPQLAAELAALRRQLG--------------------------------------G  229 (419)
T ss_pred             HHHHh-cCCcc-eEEecceeecCCCChhhHHHHHHHHHhcC--------------------------------------C
Confidence            99988 57764 2222322222222   2223344444433                                      2


Q ss_pred             CCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh-HHHHHH
Q 011979          256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEEK  334 (473)
Q Consensus       256 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-~~l~~~  334 (473)
                      .+| +++..++  ....-+.++++++.++++                           +||..+++|-.-|++ +.++++
T Consensus       230 ~r~-v~iaaST--H~GEeei~l~~~~~l~~~---------------------------~~~~llIlVPRHpERf~~v~~l  279 (419)
T COG1519         230 HRP-VWVAAST--HEGEEEIILDAHQALKKQ---------------------------FPNLLLILVPRHPERFKAVENL  279 (419)
T ss_pred             CCc-eEEEecC--CCchHHHHHHHHHHHHhh---------------------------CCCceEEEecCChhhHHHHHHH
Confidence            255 5555555  334556788999999884                           789999999998875 788999


Q ss_pred             HHHcCCCcEEEecCCC-----------CcccHHHHHhcCcEEEEeccCCCCCCC-cHHHHHHHhcCCcEEEec----cCc
Q 011979          335 IRRLRLKRVAFRTMWL-----------SAEDYPLLLGSADLGVCLHTSSSGLDL-PMKVVDMFGCGLPVCAVS----YSC  398 (473)
Q Consensus       335 ~~~~~l~~V~~~g~~v-----------~~~~i~~~l~~adi~v~~~~~s~~e~~-p~kv~Eama~G~PvI~~~----~~~  398 (473)
                      +++.|++-..+.....           +--++..+|.-||+.++   ..+-... |-=.+|+.++|+|||.-.    ...
T Consensus       280 ~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFV---GGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~e  356 (419)
T COG1519         280 LKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFV---GGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSD  356 (419)
T ss_pred             HHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEE---CCcccCCCCCChhhHHHcCCCEEeCCccccHHH
Confidence            9999874333321101           13579999999999998   3321111 235699999999999974    456


Q ss_pred             cccceecCCceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          399 IEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       399 ~~e~i~~~~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      +.+.+...+.|+.++|.+.+++.+..+..    |++.+++|++++.++.
T Consensus       357 i~~~l~~~ga~~~v~~~~~l~~~v~~l~~----~~~~r~~~~~~~~~~v  401 (419)
T COG1519         357 IAERLLQAGAGLQVEDADLLAKAVELLLA----DEDKREAYGRAGLEFL  401 (419)
T ss_pred             HHHHHHhcCCeEEECCHHHHHHHHHHhcC----CHHHHHHHHHHHHHHH
Confidence            66667777889999997777777777776    4899999999999977

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1

Probab=99.07  E-value=1.9e-08  Score=101.18  Aligned_cols=117  Identities=23%  Similarity=0.345  Sum_probs=83.7

Q ss_pred             CCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHH
Q 011979          256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI  335 (473)
Q Consensus       256 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~  335 (473)
                      +.+.+++|.|.....    .++++++.+                               ++..++++|.+...       
T Consensus       191 ~~~~iLv~~gg~~~~----~~~~~l~~~-------------------------------~~~~~~v~g~~~~~-------  228 (318)
T PF13528_consen  191 DEPKILVYFGGGGPG----DLIEALKAL-------------------------------PDYQFIVFGPNAAD-------  228 (318)
T ss_pred             CCCEEEEEeCCCcHH----HHHHHHHhC-------------------------------CCCeEEEEcCCccc-------
Confidence            355689999988655    566766664                               56788888865211       


Q ss_pred             HHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc------cccceecCCce
Q 011979          336 RRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC------IEELVKVDKNG  409 (473)
Q Consensus       336 ~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~------~~e~i~~~~~G  409 (473)
                        ...+||++.++  ...++.+++..||++|.    ..|.   ..++|++++|+|+|+....+      ..+.+.+.+.|
T Consensus       229 --~~~~ni~~~~~--~~~~~~~~m~~ad~vIs----~~G~---~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~  297 (318)
T PF13528_consen  229 --PRPGNIHVRPF--STPDFAELMAAADLVIS----KGGY---TTISEALALGKPALVIPRPGQDEQEYNARKLEELGLG  297 (318)
T ss_pred             --ccCCCEEEeec--ChHHHHHHHHhCCEEEE----CCCH---HHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCe
Confidence              11368999875  34899999999999997    2331   26999999999999987543      34556667777


Q ss_pred             EEeC----CHHHHHHHHHHH
Q 011979          410 LLFS----SSSELADQLLML  425 (473)
Q Consensus       410 ~~~~----~~~~la~~i~~l  425 (473)
                      ...+    +++.|.+.|.++
T Consensus       298 ~~~~~~~~~~~~l~~~l~~~  317 (318)
T PF13528_consen  298 IVLSQEDLTPERLAEFLERL  317 (318)
T ss_pred             EEcccccCCHHHHHHHHhcC
Confidence            7764    478888877653

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing

Probab=99.03  E-value=3e-07  Score=95.11  Aligned_cols=239  Identities=17%  Similarity=0.175  Sum_probs=139.1

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH  179 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~  179 (473)
                      .+||+|++++-.+  +...+.+++...++|++. +|+-..     +.+.   .   -....+...+.|+..++.++..++
T Consensus        92 ~~Pd~vlv~GD~~--~~la~alaA~~~~IPv~H-veaG~r-----s~~~---~---eE~~r~~i~~la~l~f~~t~~~~~  157 (365)
T TIGR03568        92 LKPDLVVVLGDRF--EMLAAAIAAALLNIPIAH-IHGGEV-----TEGA---I---DESIRHAITKLSHLHFVATEEYRQ  157 (365)
T ss_pred             hCCCEEEEeCCch--HHHHHHHHHHHhCCcEEE-EECCcc-----CCCC---c---hHHHHHHHHHHHhhccCCCHHHHH
Confidence            7899999998432  223577888888999773 333210     1111   0   011223345678889999999998


Q ss_pred             HHHHHhCCc-eEEeeCCCC--CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCC
Q 011979          180 ELAQNWGIK-ATVLYDQPP--EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN  256 (473)
Q Consensus       180 ~l~~~~g~~-~~vi~n~~~--~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (473)
                      .|.+ .|.+ ..++..|.+  +.+.......+..+..+++                                    ++++
T Consensus       158 ~L~~-eg~~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lg------------------------------------l~~~  200 (365)
T TIGR03568       158 RVIQ-MGEDPDRVFNVGSPGLDNILSLDLLSKEELEEKLG------------------------------------IDLD  200 (365)
T ss_pred             HHHH-cCCCCCcEEEECCcHHHHHHhhhccCHHHHHHHhC------------------------------------CCCC
Confidence            8877 4664 233333322  1111110011223333333                                    2223


Q ss_pred             CCeEEEEEeecc--CCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHH
Q 011979          257 RPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK  334 (473)
Q Consensus       257 ~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~  334 (473)
                      ++++++..-+-.  .....+.+.+.++.+.+.                           ..++.++.-..++....+.+.
T Consensus       201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---------------------------~~~~~vi~P~~~p~~~~i~~~  253 (365)
T TIGR03568       201 KPYALVTFHPVTLEKESAEEQIKELLKALDEL---------------------------NKNYIFTYPNADAGSRIINEA  253 (365)
T ss_pred             CCEEEEEeCCCcccccCchHHHHHHHHHHHHh---------------------------ccCCEEEEeCCCCCchHHHHH
Confidence            343333333222  223333344444444331                           123433332233434334444


Q ss_pred             HHHcC--CCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEe
Q 011979          335 IRRLR--LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF  412 (473)
Q Consensus       335 ~~~~~--l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~  412 (473)
                      ++.+.  .++|.+.++ ++..++..+++.|+++|-   .|++     -+-||.++|+|||+.  +...|.+..+.+++.+
T Consensus       254 i~~~~~~~~~v~l~~~-l~~~~~l~Ll~~a~~vit---dSSg-----gi~EA~~lg~Pvv~l--~~R~e~~~~g~nvl~v  322 (365)
T TIGR03568       254 IEEYVNEHPNFRLFKS-LGQERYLSLLKNADAVIG---NSSS-----GIIEAPSFGVPTINI--GTRQKGRLRADSVIDV  322 (365)
T ss_pred             HHHHhcCCCCEEEECC-CChHHHHHHHHhCCEEEE---cChh-----HHHhhhhcCCCEEee--cCCchhhhhcCeEEEe
Confidence            44432  368999999 999999999999999997   5545     337999999999965  4677888778888877


Q ss_pred             C-CHHHHHHHHHHHHh
Q 011979          413 S-SSSELADQLLMLFK  427 (473)
Q Consensus       413 ~-~~~~la~~i~~l~~  427 (473)
                      + |++++.+++.++.+
T Consensus       323 g~~~~~I~~a~~~~~~  338 (365)
T TIGR03568       323 DPDKEEIVKAIEKLLD  338 (365)
T ss_pred             CCCHHHHHHHHHHHhC
Confidence            6 79999999999543

This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.

>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like

Probab=98.98  E-value=2.1e-08  Score=88.39  Aligned_cols=128  Identities=16%  Similarity=0.165  Sum_probs=83.6

Q ss_pred             hhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhh
Q 011979           19 PRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVK   98 (473)
Q Consensus        19 ~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (473)
                      .....++..|.++ ||+|++++.....  ......+++++++++.  . ..+   ....+. ..+        +++++ +
T Consensus        11 ~~~~~~~~~L~~~-g~~V~ii~~~~~~--~~~~~~~~i~~~~~~~--~-~k~---~~~~~~-~~~--------l~k~i-k   71 (139)
T PF13477_consen   11 TFIYNLAKELKKR-GYDVHIITPRNDY--EKYEIIEGIKVIRLPS--P-RKS---PLNYIK-YFR--------LRKII-K   71 (139)
T ss_pred             HHHHHHHHHHHHC-CCEEEEEEcCCCc--hhhhHhCCeEEEEecC--C-CCc---cHHHHH-HHH--------HHHHh-c
Confidence            4566778888887 9999999985543  2344467999999972  1 111   111111 111        12223 3


Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCC-CeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcC
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRR-SAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT  174 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~-~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS  174 (473)
                      ..+||+||+|.+..  ...++.+++++.+ +|+|++.|+...       .......++.+++.+.+.+.||.+++.|
T Consensus        72 ~~~~DvIh~h~~~~--~~~~~~l~~~~~~~~~~i~~~hg~~~-------~~~~~~~~~~~~~~~~~~k~~~~ii~~~  139 (139)
T PF13477_consen   72 KEKPDVIHCHTPSP--YGLFAMLAKKLLKNKKVIYTVHGSDF-------YNSSKKKKLKKFIIKFAFKRADKIIVQS  139 (139)
T ss_pred             cCCCCEEEEecCCh--HHHHHHHHHHHcCCCCEEEEecCCee-------ecCCchHHHHHHHHHHHHHhCCEEEEcC
Confidence            37899999999632  2345667777766 999999998732       1222223366788999999999999876

>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences

Probab=98.96  E-value=3.9e-07  Score=101.71  Aligned_cols=188  Identities=16%  Similarity=0.061  Sum_probs=136.3

Q ss_pred             ccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh---
Q 011979          252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---  328 (473)
Q Consensus       252 ~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~---  328 (473)
                      .+.++.+ +++++.|+..+|+.++++..+..+.+-    ++..                   ...+.|++.|++...   
T Consensus       473 ~ldpd~l-tigfarRfa~YKR~~Lil~dl~rl~~i----l~~~-------------------~~pvQ~IfaGKAhP~d~~  528 (778)
T cd04299         473 VLDPNVL-TIGFARRFATYKRATLLLRDPERLKRL----LNDP-------------------ERPVQFIFAGKAHPADEP  528 (778)
T ss_pred             ccCCCcc-EEeeeecchhhhhHHHHHHHHHHHHHH----hhCC-------------------CCCeEEEEEEecCccchH
Confidence            3455555 899999999999999999988877541    1110                   134899999998421   


Q ss_pred             -H----HHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCC--CCCCcHHHHHHHhcCCcEEEeccCccc
Q 011979          329 -E----SYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAVSYSCIE  400 (473)
Q Consensus       329 -~----~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~--~e~~p~kv~Eama~G~PvI~~~~~~~~  400 (473)
                       .    .+.+.+++... .+|.|+.. .+.+-...++..||+.++   +|.  .|.+|+.=+=||..|.+-+++-.|-..
T Consensus       529 gK~iIk~i~~~a~~p~~~~kVvfle~-Yd~~lA~~LvaG~DvwLn---~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~  604 (778)
T cd04299         529 GKELIQEIVEFSRRPEFRGRIVFLED-YDMALARHLVQGVDVWLN---TPRRPLEASGTSGMKAALNGGLNLSVLDGWWD  604 (778)
T ss_pred             HHHHHHHHHHHHhCcCCCCcEEEEcC-CCHHHHHHHHhhhhhccc---CCCCCCCCCccchHHHHHcCCeeeecccCccc
Confidence             2    33334443333 58888866 677777888999999999   564  799999999999999999999888888


Q ss_pred             cceecCCceEEeCC--------------HHHHHHHHHHHHh-CCCC-----CHHHHHHHHHHHHHh-ccccchHHHHHHH
Q 011979          401 ELVKVDKNGLLFSS--------------SSELADQLLMLFK-GFPD-----DSDVLKKLRNGTLEM-GLSARWATEWEEH  459 (473)
Q Consensus       401 e~i~~~~~G~~~~~--------------~~~la~~i~~l~~-~~~~-----~~~~~~~~~~~~~~~-~~~~~w~~~~~~~  459 (473)
                      |.. ++.|||.+.+              .++|.+.|.+-+- -+-+     .|..+.+|.+++... ...|+|+...+++
T Consensus       605 E~~-~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY  683 (778)
T cd04299         605 EGY-DGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREY  683 (778)
T ss_pred             ccc-CCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHH
Confidence            877 7899999953              4456666654221 1111     256677776666654 4789999999999


Q ss_pred             HHHHHHHHh
Q 011979          460 AKPLITEVI  468 (473)
Q Consensus       460 ~~~~~~~~~  468 (473)
                      ++++|.-..
T Consensus       684 ~~~~Y~p~~  692 (778)
T cd04299         684 VERFYLPAA  692 (778)
T ss_pred             HHHhHHHHH
Confidence            999886443

Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.

>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases

Probab=98.94  E-value=8.8e-08  Score=89.17  Aligned_cols=173  Identities=14%  Similarity=0.169  Sum_probs=109.5

Q ss_pred             CCeEEEEEecCC-CCChhHHHHHHHHHhh---CCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHH
Q 011979            4 RGRACVVVLGDL-GRSPRMQYQALSLARQ---MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVL   79 (473)
Q Consensus         4 ~~~~~i~~~~~~-g~s~r~~~~a~~L~~~---~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~   79 (473)
                      |+++.|+..-.+ +.-++++.++..|+..   .|++|+|+|....... ......|+++..++.   +..+.  ......
T Consensus         1 mkkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~-~~~~y~gv~l~~i~~---~~~g~--~~si~y   74 (185)
T PF09314_consen    1 MKKIAIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPY-KEFEYNGVRLVYIPA---PKNGS--AESIIY   74 (185)
T ss_pred             CceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCC-CCcccCCeEEEEeCC---CCCCc--hHHHHH
Confidence            566776665322 3345666665555543   4999999998755432 345567999999982   12211  111111


Q ss_pred             HHHHHHHHHHHHHHHH---hhhhCCCCEEEEeCCCchhHHHHHHHHHhhC--CCeEEEEecCchhhhhhhhcCCCc-hHH
Q 011979           80 LLLKPLIQFFMLLWFL---CVKIASPDVFLVQNPPSVPTLVAVKWASSLR--RSAFIVDWHNFGYTLLSLSLGRRS-HFV  153 (473)
Q Consensus        80 ~~~~~~~~~~~~~~~~---~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~--~~~~i~~~h~~~~~~~~~~~~~~~-~~~  153 (473)
                             .+..++..+   .....+.|++++.+...  ...+..+.++++  +.|+++..|+..|     ...+.+ +.+
T Consensus        75 -------d~~sl~~al~~~~~~~~~~~ii~ilg~~~--g~~~~~~~r~~~~~g~~v~vN~DGlEW-----kR~KW~~~~k  140 (185)
T PF09314_consen   75 -------DFLSLLHALRFIKQDKIKYDIILILGYGI--GPFFLPFLRKLRKKGGKVVVNMDGLEW-----KRAKWGRPAK  140 (185)
T ss_pred             -------HHHHHHHHHHHHhhccccCCEEEEEcCCc--cHHHHHHHHhhhhcCCcEEECCCcchh-----hhhhcCHHHH
Confidence                   111122222   11123688999887421  222344555544  5699999998843     112333 346


Q ss_pred             HHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhC-CceEEeeCCC
Q 011979          154 SIYRWIEKYYGKMANGCLCVTQAMQHELAQNWG-IKATVLYDQP  196 (473)
Q Consensus       154 ~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g-~~~~vi~n~~  196 (473)
                      +++++-|+...+.||.+|+-|+..+++++++|+ .++++|++|.
T Consensus       141 ~~lk~~E~~avk~ad~lIaDs~~I~~y~~~~y~~~~s~~IaYGa  184 (185)
T PF09314_consen  141 KYLKFSEKLAVKYADRLIADSKGIQDYIKERYGRKKSTFIAYGA  184 (185)
T ss_pred             HHHHHHHHHHHHhCCEEEEcCHHHHHHHHHHcCCCCcEEecCCC
Confidence            788889999999999999999999999999999 7789998874

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin

Probab=98.94  E-value=4.8e-07  Score=94.12  Aligned_cols=89  Identities=16%  Similarity=0.122  Sum_probs=63.8

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc----cccceecCCceEEeC---
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS---  413 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~----~~e~i~~~~~G~~~~---  413 (473)
                      +||.+.+. +|.   ..++..||++|.   .. |   ..++.||+++|+|+|+....+    ..+.+...+.|...+   
T Consensus       288 ~~v~~~~~-~p~---~~ll~~~d~~I~---hg-G---~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~  356 (401)
T cd03784         288 DNVRVVDF-VPH---DWLLPRCAAVVH---HG-G---AGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRE  356 (401)
T ss_pred             CceEEeCC-CCH---HHHhhhhheeee---cC-C---chhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCccc
Confidence            68999877 654   566888999996   22 2   248999999999999996443    455566666777764   


Q ss_pred             -CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011979          414 -SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE  445 (473)
Q Consensus       414 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~  445 (473)
                       +.+++.+++.+++++     ..+++..+.+.+
T Consensus       357 ~~~~~l~~al~~~l~~-----~~~~~~~~~~~~  384 (401)
T cd03784         357 LTAERLAAALRRLLDP-----PSRRRAAALLRR  384 (401)
T ss_pred             CCHHHHHHHHHHHhCH-----HHHHHHHHHHHH
Confidence             588999999999883     334444444444

Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG

Probab=98.89  E-value=4.2e-07  Score=90.52  Aligned_cols=99  Identities=19%  Similarity=0.200  Sum_probs=73.2

Q ss_pred             CeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCC-CChHHHHHHHH
Q 011979          258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKESYEEKIR  336 (473)
Q Consensus       258 ~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g-~~~~~l~~~~~  336 (473)
                      +.+++..|.....+....+++++..+..                            ..++. +++|.+ +..+++++.++
T Consensus       171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~~----------------------------~~~i~-vv~G~~~~~~~~l~~~~~  221 (279)
T TIGR03590       171 RRVLVSFGGADPDNLTLKLLSALAESQI----------------------------NISIT-LVTGSSNPNLDELKKFAK  221 (279)
T ss_pred             CeEEEEeCCcCCcCHHHHHHHHHhcccc----------------------------CceEE-EEECCCCcCHHHHHHHHH
Confidence            4478888877776656677777766422                            12333 477876 55677787777


Q ss_pred             HcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc
Q 011979          337 RLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC  398 (473)
Q Consensus       337 ~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~  398 (473)
                      ..  +++.+.++   .+++.+++..||++|.    .    -|.++.|++++|+|+|+.....
T Consensus       222 ~~--~~i~~~~~---~~~m~~lm~~aDl~Is----~----~G~T~~E~~a~g~P~i~i~~~~  270 (279)
T TIGR03590       222 EY--PNIILFID---VENMAELMNEADLAIG----A----AGSTSWERCCLGLPSLAICLAE  270 (279)
T ss_pred             hC--CCEEEEeC---HHHHHHHHHHCCEEEE----C----CchHHHHHHHcCCCEEEEEecc
Confidence            64  48999988   8899999999999997    2    2458999999999999987543

This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.

>TIGR01426 MGT glycosyltransferase, MGT family

Probab=98.89  E-value=8e-07  Score=92.40  Aligned_cols=108  Identities=19%  Similarity=0.254  Sum_probs=71.1

Q ss_pred             EEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC
Q 011979          318 LFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS  397 (473)
Q Consensus       318 ~l~ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~  397 (473)
                      .++.+|.+.+.+.+.    .+ .++|.+.+. +|+.   .++..||++|.   .+ |   ..++.||+++|+|+|+....
T Consensus       257 ~i~~~g~~~~~~~~~----~~-~~~v~~~~~-~p~~---~ll~~~~~~I~---hg-G---~~t~~Eal~~G~P~v~~p~~  320 (392)
T TIGR01426       257 VVLSVGRGVDPADLG----EL-PPNVEVRQW-VPQL---EILKKADAFIT---HG-G---MNSTMEALFNGVPMVAVPQG  320 (392)
T ss_pred             EEEEECCCCChhHhc----cC-CCCeEEeCC-CCHH---HHHhhCCEEEE---CC-C---chHHHHHHHhCCCEEecCCc
Confidence            455567665433222    11 168988876 7764   67899999887   23 2   13789999999999997532


Q ss_pred             ----ccccceecCCceEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011979          398 ----CIEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE  445 (473)
Q Consensus       398 ----~~~e~i~~~~~G~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~  445 (473)
                          ...+.+.+.+.|....    +.++++++|.+++++    ++.++++++-+.+
T Consensus       321 ~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~----~~~~~~~~~l~~~  372 (392)
T TIGR01426       321 ADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLSD----PRYAERLRKMRAE  372 (392)
T ss_pred             ccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhcC----HHHHHHHHHHHHH
Confidence                2334455666777664    478999999999985    6544444444433

This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.

>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]

Probab=98.66  E-value=6.9e-06  Score=83.64  Aligned_cols=326  Identities=16%  Similarity=0.159  Sum_probs=184.2

Q ss_pred             EEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEE-EeecCCCCCCCCcchhHHHHHHHHHHHHH
Q 011979           10 VVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIH-TMTQWPTIPRGLPKVLKPVLLLLKPLIQF   88 (473)
Q Consensus        10 ~~~~~~g~s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (473)
                      ++.|.-.+.---.....+|-.+.+ +|.+++-.+....     ..|++.. .+.  ....-+..-.++.+..+.+..+++
T Consensus         6 i~AGE~SGDllGa~LikaLk~~~~-~~efvGvgG~~m~-----aeG~~sl~~~~--elsvmGf~EVL~~lp~llk~~~~~   77 (381)
T COG0763           6 LSAGEASGDLLGAGLIKALKARYP-DVEFVGVGGEKME-----AEGLESLFDME--ELSVMGFVEVLGRLPRLLKIRREL   77 (381)
T ss_pred             EEecccchhhHHHHHHHHHHhhCC-CeEEEEeccHHHH-----hccCccccCHH--HHHHhhHHHHHHHHHHHHHHHHHH
Confidence            455555443334445566666534 8999887654432     1132211 111  000111222233333333333332


Q ss_pred             HHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHh-hCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcC
Q 011979           89 FMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMA  167 (473)
Q Consensus        89 ~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~a  167 (473)
                      ...    + ...+||+++.-+.|.+...+ +..+++ ..++|+|+.+-..-|     .+..++         -..+.+..
T Consensus        78 ~~~----i-~~~kpD~~i~IDsPdFnl~v-ak~lrk~~p~i~iihYV~PsVW-----AWr~~R---------a~~i~~~~  137 (381)
T COG0763          78 VRY----I-LANKPDVLILIDSPDFNLRV-AKKLRKAGPKIKIIHYVSPSVW-----AWRPKR---------AVKIAKYV  137 (381)
T ss_pred             HHH----H-HhcCCCEEEEeCCCCCchHH-HHHHHHhCCCCCeEEEECccee-----eechhh---------HHHHHHHh
Confidence            211    1 13899999987777776664 444444 456898876554322     111111         12334578


Q ss_pred             CEEEEcCHHHHHHHHHHhCCceEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccc
Q 011979          168 NGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLA  247 (473)
Q Consensus       168 d~vi~vS~~~~~~l~~~~g~~~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (473)
                      |++.++=+...+++.+ .|.+.+.+-+...+.. |. ...+...+++++                               
T Consensus       138 D~lLailPFE~~~y~k-~g~~~~yVGHpl~d~i-~~-~~~r~~ar~~l~-------------------------------  183 (381)
T COG0763         138 DHLLAILPFEPAFYDK-FGLPCTYVGHPLADEI-PL-LPDREAAREKLG-------------------------------  183 (381)
T ss_pred             hHeeeecCCCHHHHHh-cCCCeEEeCChhhhhc-cc-cccHHHHHHHhC-------------------------------
Confidence            9999999999988876 6887555544322222 11 113444666665                               


Q ss_pred             ccccccCCCCCeEEEEEeeccC--CCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCC
Q 011979          248 GIDVFLKPNRPALVVSSTSWTP--DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG  325 (473)
Q Consensus       248 ~~~~~~~~~~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g  325 (473)
                           .+.+++.+.+.-|+=..  .+....+.+|+..++.+                           +|++++++--..
T Consensus       184 -----~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~---------------------------~~~~~~vlp~~~  231 (381)
T COG0763         184 -----IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKAR---------------------------YPDLKFVLPLVN  231 (381)
T ss_pred             -----CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhh---------------------------CCCceEEEecCc
Confidence                 34455657777776543  35678888899988874                           799999998765


Q ss_pred             CChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec-cCcc-----
Q 011979          326 PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCI-----  399 (473)
Q Consensus       326 ~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~-~~~~-----  399 (473)
                      +..+.+++...+........+   +...+-.+.+..||+.+.   .     .|++.+|++.+|+|.|++- ...+     
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~a~~~aD~al~---a-----SGT~tLE~aL~g~P~Vv~Yk~~~it~~ia  300 (381)
T COG0763         232 AKYRRIIEEALKWEVAGLSLI---LIDGEKRKAFAAADAALA---A-----SGTATLEAALAGTPMVVAYKVKPITYFIA  300 (381)
T ss_pred             HHHHHHHHHHhhccccCceEE---ecCchHHHHHHHhhHHHH---h-----ccHHHHHHHHhCCCEEEEEeccHHHHHHH
Confidence            543333333322221012222   335788889999999997   2     3569999999999999873 3322     


Q ss_pred             -----------ccceecCCceEEeC-------CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          400 -----------EELVKVDKNGLLFS-------SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       400 -----------~e~i~~~~~G~~~~-------~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                                 +.++.+.   .+++       .++.+++++..++.+    .+.++++.+...+..
T Consensus       301 k~lvk~~yisLpNIi~~~---~ivPEliq~~~~pe~la~~l~~ll~~----~~~~~~~~~~~~~l~  359 (381)
T COG0763         301 KRLVKLPYVSLPNILAGR---EIVPELIQEDCTPENLARALEELLLN----GDRREALKEKFRELH  359 (381)
T ss_pred             HHhccCCcccchHHhcCC---ccchHHHhhhcCHHHHHHHHHHHhcC----hHhHHHHHHHHHHHH
Confidence                       2222111   1121       388999999999986    555556655555544

>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria

Probab=98.58  E-value=1.6e-06  Score=89.61  Aligned_cols=252  Identities=13%  Similarity=0.147  Sum_probs=121.6

Q ss_pred             HhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCc-eEEeeCCCC--CC
Q 011979          123 SSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPP--EF  199 (473)
Q Consensus       123 ~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g~~-~~vi~n~~~--~~  199 (473)
                      ...++.++|..||+.+...............    .......+..|.+++.|+.+++.+.+.++.+ ..++..|-|  +.
T Consensus        95 ~~~~~~~~i~lwHG~~~K~~g~~~~~~~~~~----~~~~~~~~~~d~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~  170 (369)
T PF04464_consen   95 KKRKNQKYIQLWHGIPLKKIGYDSPDNKNYR----KNYKRNYRNYDYFIVSSEFEKEIFKKAFGYPEDKILVTGYPRNDY  170 (369)
T ss_dssp             ---TTSEEEE--SS--SB--GGG-S---TS-----HHHHHHHTT-SEEEESSHHHHHHHHHHTT--GGGEEES--GGGHH
T ss_pred             ccCCCcEEEEecCCCcccccchhccccccch----hhhhhhccCCcEEEECCHHHHHHHHHHhccCcceEEEeCCCeEhH
Confidence            3356789999999985322111110000000    0122344678999999999999999988887 366667743  22


Q ss_pred             cccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCH------
Q 011979          200 FHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDF------  273 (473)
Q Consensus       200 f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~------  273 (473)
                      +.......+..+...++                                    .+.++. +|+|+-++.....-      
T Consensus       171 l~~~~~~~~~~i~~~~~------------------------------------~~~~~k-~ILyaPT~R~~~~~~~~~~~  213 (369)
T PF04464_consen  171 LFNKSKENRNRIKKKLG------------------------------------IDKDKK-VILYAPTWRDNSSNEYFKFF  213 (369)
T ss_dssp             HHHSTT-HHHHHHHHTT--------------------------------------SS-E-EEEEE----GGG--GGSS--
T ss_pred             HhccCHHHHHHHHHHhc------------------------------------cCCCCc-EEEEeecccccccccccccc
Confidence            21222222445555544                                    223333 88888776554432      


Q ss_pred             HH--HHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHHHH-cCC-CcEEEecCC
Q 011979          274 GI--LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR-LRL-KRVAFRTMW  349 (473)
Q Consensus       274 ~~--li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~~-~~l-~~V~~~g~~  349 (473)
                      ..  -.+.+..+                             ..+++.+++-.-..    ....... ... ++|.+... 
T Consensus       214 ~~~~~~~~l~~~-----------------------------~~~~~~li~k~Hp~----~~~~~~~~~~~~~~i~~~~~-  259 (369)
T PF04464_consen  214 FSDLDFEKLNFL-----------------------------LKNNYVLIIKPHPN----MKKKFKDFKEDNSNIIFVSD-  259 (369)
T ss_dssp             --TT-HHHHHHH-----------------------------HTTTEEEEE--SHH----HHTT----TT-TTTEEE-TT-
T ss_pred             ccccCHHHHHHH-----------------------------hCCCcEEEEEeCch----hhhchhhhhccCCcEEECCC-
Confidence            11  12222211                             14678888876432    2222221 222 58888765 


Q ss_pred             CCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec--cC------ccccceecCCceEEeCCHHHHHHH
Q 011979          350 LSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS--YS------CIEELVKVDKNGLLFSSSSELADQ  421 (473)
Q Consensus       350 v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~--~~------~~~e~i~~~~~G~~~~~~~~la~~  421 (473)
                        .+++.+++..||++|.   .     ++..++|++.+++|||.-.  ..      |.-.-..+...|-++.+.++|.++
T Consensus       260 --~~~~~~ll~~aDiLIT---D-----ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~~~~~eL~~~  329 (369)
T PF04464_consen  260 --NEDIYDLLAAADILIT---D-----YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIVYNFEELIEA  329 (369)
T ss_dssp             ---S-HHHHHHT-SEEEE---S-----S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EESSHHHHHHH
T ss_pred             --CCCHHHHHHhcCEEEE---e-----chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCceeCCHHHHHHH
Confidence              6699999999999997   2     2338999999999999753  21      111112234457788899999999


Q ss_pred             HHHHHhCCCCCHHHH-HHHHHHHHHhccccchHHHHHHHHHHHH
Q 011979          422 LLMLFKGFPDDSDVL-KKLRNGTLEMGLSARWATEWEEHAKPLI  464 (473)
Q Consensus       422 i~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~w~~~~~~~~~~~~  464 (473)
                      |..++++    ++.. ++..+...++. .+.=.++-+++++.++
T Consensus       330 i~~~~~~----~~~~~~~~~~~~~~~~-~~~Dg~s~eri~~~I~  368 (369)
T PF04464_consen  330 IENIIEN----PDEYKEKREKFRDKFF-KYNDGNSSERIVNYIF  368 (369)
T ss_dssp             HTTHHHH----HHHTHHHHHHHHHHHS-TT--S-HHHHHHHHHH
T ss_pred             HHhhhhC----CHHHHHHHHHHHHHhC-CCCCchHHHHHHHHHh
Confidence            9998875    3332 33333333433 3444566677666554

They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.

>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=98.57  E-value=3.5e-05  Score=82.22  Aligned_cols=158  Identities=15%  Similarity=0.137  Sum_probs=98.5

Q ss_pred             eEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC---------hH
Q 011979          259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD---------KE  329 (473)
Q Consensus       259 ~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~---------~~  329 (473)
                      .+++.+.|++..||+..=++|+..+.++                       .|-...++.|+=++....         ++
T Consensus       277 ~ii~gvDrld~~kGi~~kl~Afe~fL~~-----------------------~P~~~~kv~liQi~~psr~~~~~y~~~~~  333 (474)
T PF00982_consen  277 KIIVGVDRLDYTKGIPEKLRAFERFLER-----------------------YPEYRGKVVLIQIAVPSREDVPEYQELRR  333 (474)
T ss_dssp             EEEEEE--B-GGG-HHHHHHHHHHHHHH------------------------GGGTTTEEEEEE--B-STTSHHHHHHHH
T ss_pred             EEEEEeccchhhcCHHHHHHHHHHHHHh-----------------------CcCccCcEEEEEEeeccCccchhHHHHHH
Confidence            3899999999999999999999988763                       111234577777764321         13


Q ss_pred             HHHHHHHHcC----CC---cEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCc----EEEeccCc
Q 011979          330 SYEEKIRRLR----LK---RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLP----VCAVSYSC  398 (473)
Q Consensus       330 ~l~~~~~~~~----l~---~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~P----vI~~~~~~  398 (473)
                      ++++++.+.+    -.   -|.++..-++.+++..+|+.||++++   +|..+|+-++..||.+|..+    +|.|..+|
T Consensus       334 ~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lv---TslrDGmNLva~Eyva~q~~~~GvLiLSefaG  410 (474)
T PF00982_consen  334 EVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALV---TSLRDGMNLVAKEYVACQDDNPGVLILSEFAG  410 (474)
T ss_dssp             HHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE-----SSBS--HHHHHHHHHS-TS--EEEEETTBG
T ss_pred             HHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEe---cchhhccCCcceEEEEEecCCCCceEeeccCC
Confidence            3444444332    21   25666544899999999999999999   89999999999999999876    67778888


Q ss_pred             cccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          399 IEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       399 ~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      .++.+.+  ..++++  |.+++|++|.+.++.   .+++++...+...+..
T Consensus       411 aa~~L~~--~al~VNP~d~~~~A~ai~~AL~M---~~~Er~~r~~~~~~~v  456 (474)
T PF00982_consen  411 AAEQLSE--AALLVNPWDIEEVADAIHEALTM---PPEERKERHARLREYV  456 (474)
T ss_dssp             GGGT-TT--S-EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH
T ss_pred             HHHHcCC--ccEEECCCChHHHHHHHHHHHcC---CHHHHHHHHHHHHHHh
Confidence            8887743  226665  899999999999997   4566665555555545

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.

>TIGR00661 MJ1255 conserved hypothetical protein

Probab=98.57  E-value=7.2e-06  Score=83.15  Aligned_cols=77  Identities=13%  Similarity=0.204  Sum_probs=54.5

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCcc------ccceecCCceEEeC-
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI------EELVKVDKNGLLFS-  413 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~------~e~i~~~~~G~~~~-  413 (473)
                      +|+.+.+. .+ +++..++..||++|.   .+..    .++.|++++|+|+|..+..+.      ...+.+.+.|...+ 
T Consensus       229 ~~v~~~~~-~~-~~~~~~l~~ad~vI~---~~G~----~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~  299 (321)
T TIGR00661       229 ENVEIRRI-TT-DNFKELIKNAELVIT---HGGF----SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEY  299 (321)
T ss_pred             CCEEEEEC-Ch-HHHHHHHHhCCEEEE---CCCh----HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcCh
Confidence            58998875 54 789999999999998   3322    268999999999999986543      23466667777765 


Q ss_pred             -CHHHHHHHHHHHHh
Q 011979          414 -SSSELADQLLMLFK  427 (473)
Q Consensus       414 -~~~~la~~i~~l~~  427 (473)
                       +. ++.+.+...++
T Consensus       300 ~~~-~~~~~~~~~~~  313 (321)
T TIGR00661       300 KEL-RLLEAILDIRN  313 (321)
T ss_pred             hhH-HHHHHHHhccc
Confidence             34 44444444443

This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.

>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.57  E-value=3.5e-05  Score=78.76  Aligned_cols=258  Identities=17%  Similarity=0.185  Sum_probs=159.5

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH  179 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~  179 (473)
                      .+||+|++|+--  .+..++.+++...++|+..---+..       .+....-.-   .-.+.....|+..++.|+..++
T Consensus        91 ~kPD~VlVhGDT--~t~lA~alaa~~~~IpV~HvEAGlR-------t~~~~~PEE---~NR~l~~~~S~~hfapte~ar~  158 (383)
T COG0381          91 EKPDLVLVHGDT--NTTLAGALAAFYLKIPVGHVEAGLR-------TGDLYFPEE---INRRLTSHLSDLHFAPTEIARK  158 (383)
T ss_pred             hCCCEEEEeCCc--chHHHHHHHHHHhCCceEEEecccc-------cCCCCCcHH---HHHHHHHHhhhhhcCChHHHHH
Confidence            899999999842  2333568888899999876443331       111110000   1123445578999999999999


Q ss_pred             HHHHHhCCceE-EeeCCCC--CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCC
Q 011979          180 ELAQNWGIKAT-VLYDQPP--EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN  256 (473)
Q Consensus       180 ~l~~~~g~~~~-vi~n~~~--~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (473)
                      .|.+. |.+-. ++-.|.+  +.....        +.+..                     .+++.....     ....+
T Consensus       159 nLl~E-G~~~~~IfvtGnt~iDal~~~--------~~~~~---------------------~~~~~~~~~-----~~~~~  203 (383)
T COG0381         159 NLLRE-GVPEKRIFVTGNTVIDALLNT--------RDRVL---------------------EDSKILAKG-----LDDKD  203 (383)
T ss_pred             HHHHc-CCCccceEEeCChHHHHHHHH--------Hhhhc---------------------cchhhHHhh-----hcccc
Confidence            99884 77632 3333322  211111        00000                     000000000     01223


Q ss_pred             CCeEEEEEeeccCC-CCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHH
Q 011979          257 RPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI  335 (473)
Q Consensus       257 ~~~~i~~~G~~~~~-K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~  335 (473)
                      +..+++..=|-... +++..+.+++..+.++                           ++++.++.--..  ...+++..
T Consensus       204 ~~~iLvT~HRreN~~~~~~~i~~al~~i~~~---------------------------~~~~~viyp~H~--~~~v~e~~  254 (383)
T COG0381         204 KKYILVTAHRRENVGEPLEEICEALREIAEE---------------------------YPDVIVIYPVHP--RPRVRELV  254 (383)
T ss_pred             CcEEEEEcchhhcccccHHHHHHHHHHHHHh---------------------------CCCceEEEeCCC--ChhhhHHH
Confidence            33355544443332 7888999999988873                           567766654432  24455555


Q ss_pred             -HHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec-cCccccceecCCceEEe
Q 011979          336 -RRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNGLLF  412 (473)
Q Consensus       336 -~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~-~~~~~e~i~~~~~G~~~  412 (473)
                       +.++- ++|.++.+ +...++..+++.|-+.+-   .|.+     ..=||-..|+||++-. ...-+|.+.. ++-.++
T Consensus       255 ~~~L~~~~~v~li~p-l~~~~f~~L~~~a~~ilt---DSGg-----iqEEAp~lg~Pvl~lR~~TERPE~v~a-gt~~lv  324 (383)
T COG0381         255 LKRLKNVERVKLIDP-LGYLDFHNLMKNAFLILT---DSGG-----IQEEAPSLGKPVLVLRDTTERPEGVEA-GTNILV  324 (383)
T ss_pred             HHHhCCCCcEEEeCC-cchHHHHHHHHhceEEEe---cCCc-----hhhhHHhcCCcEEeeccCCCCccceec-CceEEe
Confidence             55554 68999998 999999999999966664   4444     5679999999999985 5566676644 344445


Q ss_pred             C-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          413 S-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       413 ~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      + +.+.+.+.+..++++    ++.+++|++..--+.
T Consensus       325 g~~~~~i~~~~~~ll~~----~~~~~~m~~~~npYg  356 (383)
T COG0381         325 GTDEENILDAATELLED----EEFYERMSNAKNPYG  356 (383)
T ss_pred             CccHHHHHHHHHHHhhC----hHHHHHHhcccCCCc
Confidence            4 789999999999995    788888877665544

>PRK10117 trehalose-6-phosphate synthase; Provisional

Probab=98.55  E-value=3.2e-05  Score=81.95  Aligned_cols=169  Identities=7%  Similarity=0.039  Sum_probs=118.9

Q ss_pred             EEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC---------hHH
Q 011979          260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD---------KES  330 (473)
Q Consensus       260 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~---------~~~  330 (473)
                      +++.+.|++.-||+..=++|+..+.++                       .|.-..++.|+-+.....         +.+
T Consensus       257 lilgVDRLDytKGi~~rl~Afe~fL~~-----------------------~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~  313 (474)
T PRK10117        257 NIFSVERLDYSKGLPERFLAYEALLEK-----------------------YPQHHGKIRYTQIAPTSRGDVQAYQDIRHQ  313 (474)
T ss_pred             EEEEecccccccCHHHHHHHHHHHHHh-----------------------ChhhcCCEEEEEEcCCCCCccHHHHHHHHH
Confidence            889999999999999999999988763                       111223566776653211         133


Q ss_pred             HHHHHHHcCC-------CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCC-----cEEEeccCc
Q 011979          331 YEEKIRRLRL-------KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL-----PVCAVSYSC  398 (473)
Q Consensus       331 l~~~~~~~~l-------~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~-----PvI~~~~~~  398 (473)
                      +++++.+.+-       .-|.++..-++++++..+|+.||++++   ++..+|+-++..||.||-.     ++|-|...|
T Consensus       314 v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lV---TplRDGMNLVAkEyva~q~~~~~GvLILSefAG  390 (474)
T PRK10117        314 LETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLV---TPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG  390 (474)
T ss_pred             HHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEe---cccccccccccchheeeecCCCCccEEEecccc
Confidence            4444444432       126666555899999999999999999   8999999999999999976     377788888


Q ss_pred             cccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcc---ccchHHHHHHHH
Q 011979          399 IEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGL---SARWATEWEEHA  460 (473)
Q Consensus       399 ~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~w~~~~~~~~  460 (473)
                      .++.+.   ..++++  |.+++|++|.+.+..   .++++++-.+...+...   ...|.+..-+-+
T Consensus       391 aA~~L~---~AllVNP~d~~~~A~Ai~~AL~M---p~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L  451 (474)
T PRK10117        391 AANELT---SALIVNPYDRDEVAAALDRALTM---PLAERISRHAEMLDVIVKNDINHWQECFISDL  451 (474)
T ss_pred             hHHHhC---CCeEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Confidence            887773   356776  899999999999997   45555544444444442   234555544333

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=98.54  E-value=2.7e-05  Score=80.43  Aligned_cols=310  Identities=16%  Similarity=0.178  Sum_probs=171.4

Q ss_pred             EEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEE-EEeecCCCCCCCCcchhHHHHHHHHHHHHH
Q 011979           10 VVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI-HTMTQWPTIPRGLPKVLKPVLLLLKPLIQF   88 (473)
Q Consensus        10 ~~~~~~g~s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (473)
                      ++.|.-.|.---...+..|-++ +-++.+++-.+....     ..|++. ..+.  ....-+..-..+.+..+.+...+.
T Consensus         3 i~AGE~SGD~~ga~Li~~Lk~~-~p~~~~~GvGG~~M~-----~~G~~~l~d~~--~lsvmG~~Evl~~l~~~~~~~~~~   74 (373)
T PF02684_consen    3 ISAGEASGDLHGARLIRALKAR-DPDIEFYGVGGPRMQ-----AAGVESLFDME--ELSVMGFVEVLKKLPKLKRLFRKL   74 (373)
T ss_pred             EEeeCccHHHHHHHHHHHHHhh-CCCcEEEEEechHHH-----hCCCceecchH--HhhhccHHHHHHHHHHHHHHHHHH
Confidence            3445443333333445566665 557888876655432     124332 2222  111112222222233333333221


Q ss_pred             HHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhC-CCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcC
Q 011979           89 FMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMA  167 (473)
Q Consensus        89 ~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~-~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~a  167 (473)
                      .    ..+ +..+||+++.-+.|.+..- +++.+++.. ++|+||.+-.--|     .++.+ .        -+.+.+..
T Consensus        75 ~----~~~-~~~~pd~vIlID~pgFNlr-lak~lk~~~~~~~viyYI~PqvW-----AWr~~-R--------~~~i~~~~  134 (373)
T PF02684_consen   75 V----ERI-KEEKPDVVILIDYPGFNLR-LAKKLKKRGIPIKVIYYISPQVW-----AWRPG-R--------AKKIKKYV  134 (373)
T ss_pred             H----HHH-HHcCCCEEEEeCCCCccHH-HHHHHHHhCCCceEEEEECCcee-----eeCcc-H--------HHHHHHHH
Confidence            1    111 3489999988776666555 344444332 3447775543311     11111 1        12334578


Q ss_pred             CEEEEcCHHHHHHHHHHhCCceEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccc
Q 011979          168 NGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLA  247 (473)
Q Consensus       168 d~vi~vS~~~~~~l~~~~g~~~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (473)
                      |.++|+=+...+++++ .|.+++.+-+.-.+...+...  +...++.                                 
T Consensus       135 D~ll~ifPFE~~~y~~-~g~~~~~VGHPl~d~~~~~~~--~~~~~~~---------------------------------  178 (373)
T PF02684_consen  135 DHLLVIFPFEPEFYKK-HGVPVTYVGHPLLDEVKPEPD--RAEAREK---------------------------------  178 (373)
T ss_pred             hheeECCcccHHHHhc-cCCCeEEECCcchhhhccCCC--HHHHHHh---------------------------------
Confidence            9999999999988876 587755554432232222211  1111111                                 


Q ss_pred             ccccccCCCCCeEEEEEeeccC--CCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCC
Q 011979          248 GIDVFLKPNRPALVVSSTSWTP--DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG  325 (473)
Q Consensus       248 ~~~~~~~~~~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g  325 (473)
                          .+++++|.+.+.-|+=..  .+....++++++.+.++                           .|++++++....
T Consensus       179 ----~l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~---------------------------~p~l~fvvp~a~  227 (373)
T PF02684_consen  179 ----LLDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQ---------------------------RPDLQFVVPVAP  227 (373)
T ss_pred             ----cCCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHh---------------------------CCCeEEEEecCC
Confidence                134556767777776433  35678899999999884                           799999998765


Q ss_pred             CChHH-HHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec-cC------
Q 011979          326 PDKES-YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YS------  397 (473)
Q Consensus       326 ~~~~~-l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~-~~------  397 (473)
                      ...+. +++..+..+. .+.+.-   ...+-.+.++.||+.+.   .     .|++.+|++.+|+|.|+.- .+      
T Consensus       228 ~~~~~~i~~~~~~~~~-~~~~~~---~~~~~~~~m~~ad~al~---~-----SGTaTLE~Al~g~P~Vv~Yk~~~lt~~i  295 (373)
T PF02684_consen  228 EVHEELIEEILAEYPP-DVSIVI---IEGESYDAMAAADAALA---A-----SGTATLEAALLGVPMVVAYKVSPLTYFI  295 (373)
T ss_pred             HHHHHHHHHHHHhhCC-CCeEEE---cCCchHHHHHhCcchhh---c-----CCHHHHHHHHhCCCEEEEEcCcHHHHHH
Confidence            44433 4455555443 233321   14677889999999998   3     3569999999999999873 32      


Q ss_pred             ----------ccccceecCCceEEe----C--CHHHHHHHHHHHHhC
Q 011979          398 ----------CIEELVKVDKNGLLF----S--SSSELADQLLMLFKG  428 (473)
Q Consensus       398 ----------~~~e~i~~~~~G~~~----~--~~~~la~~i~~l~~~  428 (473)
                                ++..++.+..  ++-    +  +++.+++.+..++.+
T Consensus       296 ak~lvk~~~isL~Niia~~~--v~PEliQ~~~~~~~i~~~~~~ll~~  340 (373)
T PF02684_consen  296 AKRLVKVKYISLPNIIAGRE--VVPELIQEDATPENIAAELLELLEN  340 (373)
T ss_pred             HHHhhcCCEeechhhhcCCC--cchhhhcccCCHHHHHHHHHHHhcC
Confidence                      2223332111  111    1  589999999999886

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process

>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5

Probab=98.52  E-value=1.2e-05  Score=82.55  Aligned_cols=252  Identities=19%  Similarity=0.189  Sum_probs=135.2

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCc-hHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRS-HFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      .+||+|++++-. . ..+++.+++...++|++ ++|.-..      -+..+ +.  .-......+.+.|+..+|.++..+
T Consensus        66 ~~Pd~Vlv~GD~-~-~~la~alaA~~~~ipv~-HieaGlR------s~d~~~g~--~de~~R~~i~~la~lhf~~t~~~~  134 (346)
T PF02350_consen   66 EKPDAVLVLGDR-N-EALAAALAAFYLNIPVA-HIEAGLR------SGDRTEGM--PDEINRHAIDKLAHLHFAPTEEAR  134 (346)
T ss_dssp             HT-SEEEEETTS-H-HHHHHHHHHHHTT-EEE-EES-----------S-TTSST--THHHHHHHHHHH-SEEEESSHHHH
T ss_pred             cCCCEEEEEcCC-c-hHHHHHHHHHHhCCCEE-EecCCCC------ccccCCCC--chhhhhhhhhhhhhhhccCCHHHH
Confidence            789999999843 3 33357788889999954 4543310      00111 11  011223345568999999999999


Q ss_pred             HHHHHHhCCc-eEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCC
Q 011979          179 HELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR  257 (473)
Q Consensus       179 ~~l~~~~g~~-~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (473)
                      +.|.+ .|.+ -.+...|.+      ..+.-...+.....                        .+.   ...+.....+
T Consensus       135 ~~L~~-~G~~~~rI~~vG~~------~~D~l~~~~~~~~~------------------------~~~---~~~i~~~~~~  180 (346)
T PF02350_consen  135 ERLLQ-EGEPPERIFVVGNP------GIDALLQNKEEIEE------------------------KYK---NSGILQDAPK  180 (346)
T ss_dssp             HHHHH-TT--GGGEEE---H------HHHHHHHHHHTTCC-------------------------HH---HHHHHHCTTS
T ss_pred             HHHHh-cCCCCCeEEEEChH------HHHHHHHhHHHHhh------------------------hhh---hHHHHhccCC
Confidence            99988 4775 344444432      00000000000000                        000   0000001334


Q ss_pred             CeEEEEEeeccCC---CCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCC--ChHHHH
Q 011979          258 PALVVSSTSWTPD---EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYE  332 (473)
Q Consensus       258 ~~~i~~~G~~~~~---K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~--~~~~l~  332 (473)
                      +++++..=+.+..   .....+.++++.+.++                            +++.+++.....  ....+.
T Consensus       181 ~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~----------------------------~~~~vi~~~hn~p~~~~~i~  232 (346)
T PF02350_consen  181 PYILVTLHPVTNEDNPERLEQILEALKALAER----------------------------QNVPVIFPLHNNPRGSDIII  232 (346)
T ss_dssp             EEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH----------------------------TTEEEEEE--S-HHHHHHHH
T ss_pred             CEEEEEeCcchhcCChHHHHHHHHHHHHHHhc----------------------------CCCcEEEEecCCchHHHHHH
Confidence            4455544333222   3356677777777662                            678888888632  234455


Q ss_pred             HHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec-cCccccceecCCceEE
Q 011979          333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNGLL  411 (473)
Q Consensus       333 ~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~-~~~~~e~i~~~~~G~~  411 (473)
                      +.++++  +++.+..+ +++.++..+++.|++.|-   .|++     ..-||..+|+|||... .+.-.+.+..+.+-+ 
T Consensus       233 ~~l~~~--~~v~~~~~-l~~~~~l~ll~~a~~vvg---dSsG-----I~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-  300 (346)
T PF02350_consen  233 EKLKKY--DNVRLIEP-LGYEEYLSLLKNADLVVG---DSSG-----IQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-  300 (346)
T ss_dssp             HHHTT---TTEEEE-----HHHHHHHHHHESEEEE---SSHH-----HHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-
T ss_pred             HHhccc--CCEEEECC-CCHHHHHHHHhcceEEEE---cCcc-----HHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-
Confidence            555555  49999998 999999999999999997   4433     4459999999999994 566667666666555 


Q ss_pred             eC-CHHHHHHHHHHHHhCCCCCHHHHHHHH
Q 011979          412 FS-SSSELADQLLMLFKGFPDDSDVLKKLR  440 (473)
Q Consensus       412 ~~-~~~~la~~i~~l~~~~~~~~~~~~~~~  440 (473)
                      ++ |.+++.++|.+++++    ++.+.++.
T Consensus       301 v~~~~~~I~~ai~~~l~~----~~~~~~~~  326 (346)
T PF02350_consen  301 VGTDPEAIIQAIEKALSD----KDFYRKLK  326 (346)
T ss_dssp             ETSSHHHHHHHHHHHHH-----HHHHHHHH
T ss_pred             eCCCHHHHHHHHHHHHhC----hHHHHhhc
Confidence            65 899999999999984    44444443

1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=98.37  E-value=5.5e-05  Score=81.89  Aligned_cols=248  Identities=12%  Similarity=0.081  Sum_probs=144.3

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhC-CCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHH
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM  177 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~-~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~  177 (473)
                      ..+||+++.-+.|.+..- +++.+++.. ++|+||.+-.--|     ..+++ .        -+.+.+..|+++|+=+..
T Consensus       308 ~~kPD~vIlID~PgFNlr-LAK~lkk~Gi~ipviyYVsPqVW-----AWR~~-R--------ikki~k~vD~ll~IfPFE  372 (608)
T PRK01021        308 KTNPRTVICIDFPDFHFL-LIKKLRKRGYKGKIVHYVCPSIW-----AWRPK-R--------KTILEKYLDLLLLILPFE  372 (608)
T ss_pred             hcCCCEEEEeCCCCCCHH-HHHHHHhcCCCCCEEEEECccce-----eeCcc-h--------HHHHHHHhhhheecCccC
Confidence            378999998776666655 355555442 2588875544321     11111 1        123446789999999999


Q ss_pred             HHHHHHHhCCceEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCC
Q 011979          178 QHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR  257 (473)
Q Consensus       178 ~~~l~~~~g~~~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (473)
                      .+++++ .|.+++.+-+.-.+......  .+.+.+++++                                    ++++.
T Consensus       373 ~~~y~~-~gv~v~yVGHPL~d~i~~~~--~~~~~r~~lg------------------------------------l~~~~  413 (608)
T PRK01021        373 QNLFKD-SPLRTVYLGHPLVETISSFS--PNLSWKEQLH------------------------------------LPSDK  413 (608)
T ss_pred             HHHHHh-cCCCeEEECCcHHhhcccCC--CHHHHHHHcC------------------------------------CCCCC
Confidence            988876 68886665443223222111  2233444444                                    34455


Q ss_pred             CeEEEEEeeccC--CCCHHHHHHHHH--HhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC-hHHHH
Q 011979          258 PALVVSSTSWTP--DEDFGILLEAAL--MYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYE  332 (473)
Q Consensus       258 ~~~i~~~G~~~~--~K~~~~li~a~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~-~~~l~  332 (473)
                      +.+.+.-|+=..  .+....+++|++  .+.                              ++.++++....+. .+.++
T Consensus       414 ~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~------------------------------~~l~fvvp~a~~~~~~~i~  463 (608)
T PRK01021        414 PIVAAFPGSRRGDILRNLTIQVQAFLASSLA------------------------------STHQLLVSSANPKYDHLIL  463 (608)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHHHHhc------------------------------cCeEEEEecCchhhHHHHH
Confidence            656666666432  356788888887  332                              3577877543332 35566


Q ss_pred             HHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec-cCccc-----------
Q 011979          333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIE-----------  400 (473)
Q Consensus       333 ~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~-~~~~~-----------  400 (473)
                      +.++..++-.+.+...    ++-.++++.||+.+.   .     .|++.+|++.+|+|.|+.- .+.+.           
T Consensus       464 ~~~~~~~~~~~~ii~~----~~~~~~m~aaD~aLa---a-----SGTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~  531 (608)
T PRK01021        464 EVLQQEGCLHSHIVPS----QFRYELMRECDCALA---K-----CGTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKII  531 (608)
T ss_pred             HHHhhcCCCCeEEecC----cchHHHHHhcCeeee---c-----CCHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhcc
Confidence            6665433213344422    234799999999998   3     3569999999999999862 22111           


Q ss_pred             -------cceecCC--ceEE---eC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          401 -------ELVKVDK--NGLL---FS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       401 -------e~i~~~~--~G~~---~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                             .++.+..  --++   .+ +++.+++.+ +++.+    ++.++++.+...+..
T Consensus       532 i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d----~~~r~~~~~~l~~lr  586 (608)
T PRK01021        532 LPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKT----SQSKEKQKDACRDLY  586 (608)
T ss_pred             CCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcC----HHHHHHHHHHHHHHH
Confidence                   1111111  1122   12 588899886 67764    666777666665544

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=98.29  E-value=0.00051  Score=78.27  Aligned_cols=163  Identities=7%  Similarity=0.034  Sum_probs=113.5

Q ss_pred             EEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCC----EEEEEEcCC-----CCh--
Q 011979          260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR----LLFIITGKG-----PDK--  328 (473)
Q Consensus       260 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~ivG~g-----~~~--  328 (473)
                      +++.+.|+..-||+..=+.|+..+.++                           +|.    +.|+-+...     ++.  
T Consensus       341 ~ilgVDrlD~~KGi~~kl~A~e~~L~~---------------------------~P~~~gkvvlvQia~psr~~~~~y~~  393 (854)
T PLN02205        341 MLLGVDDMDIFKGISLKLLAMEQLLMQ---------------------------HPEWQGKVVLVQIANPARGKGKDVKE  393 (854)
T ss_pred             EEEEccCcccccCHHHHHHHHHHHHHh---------------------------CccccCCEEEEEEecCCCcccHHHHH
Confidence            899999999999999999999998763                           444    456655432     221  


Q ss_pred             --HHHHHHHHHcCC-------CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCC----------
Q 011979          329 --ESYEEKIRRLRL-------KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL----------  389 (473)
Q Consensus       329 --~~l~~~~~~~~l-------~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~----------  389 (473)
                        .++++.+.+.+-       .-|.++..-++.+++..+|+.||+++.   ++..+|+-++..||.+|..          
T Consensus       394 ~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lV---T~lRDGMNLva~Eyia~~~~~~~~~~~~~  470 (854)
T PLN02205        394 VQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLV---TAVRDGMNLIPYEYIISRQGNEKLDKLLG  470 (854)
T ss_pred             HHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEe---ccccccccccchheeEEccCccccccccc
Confidence              233444444332       236777555899999999999999999   8999999999999999864          


Q ss_pred             ---------cEEEeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcc---ccchHHH
Q 011979          390 ---------PVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGL---SARWATE  455 (473)
Q Consensus       390 ---------PvI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~w~~~  455 (473)
                               .+|.|...|.+..+.   ..++++  |.+++|++|.+.+..   .+++++.-.+..+++.+   ...|.+.
T Consensus       471 ~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~m---~~~Er~~R~~~~~~~v~~~d~~~W~~~  544 (854)
T PLN02205        471 LEPSTPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALEM---AEPEKQLRHEKHYRYVSTHDVGYWARS  544 (854)
T ss_pred             cccccCCCCceEeeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHhhCCHHHHHHH
Confidence                     266677766666552   356665  799999999999997   34444433333333332   2446655


Q ss_pred             HHH
Q 011979          456 WEE  458 (473)
Q Consensus       456 ~~~  458 (473)
                      .-.
T Consensus       545 fl~  547 (854)
T PLN02205        545 FLQ  547 (854)
T ss_pred             HHH
Confidence            433

>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]

Probab=98.26  E-value=0.0017  Score=68.90  Aligned_cols=148  Identities=11%  Similarity=0.073  Sum_probs=109.9

Q ss_pred             eEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC--h-------H
Q 011979          259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--K-------E  329 (473)
Q Consensus       259 ~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~--~-------~  329 (473)
                      .+++.+.|++.-||+..=+.|+..+.+.                       .|....++.++-++....  .       .
T Consensus       283 kiivgvDRlDy~kGi~~rl~Afe~lL~~-----------------------~Pe~~~kvvliQi~~pSr~~v~~y~~~~~  339 (486)
T COG0380         283 KLIVGVDRLDYSKGIPQRLLAFERLLEE-----------------------YPEWRGKVVLLQIAPPSREDVEEYQALRL  339 (486)
T ss_pred             eEEEEehhcccccCcHHHHHHHHHHHHh-----------------------ChhhhCceEEEEecCCCccccHHHHHHHH
Confidence            3899999999999999999999988763                       111234566777775432  1       2


Q ss_pred             HHHHHHHHcC----C---CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCC----cEEEeccCc
Q 011979          330 SYEEKIRRLR----L---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL----PVCAVSYSC  398 (473)
Q Consensus       330 ~l~~~~~~~~----l---~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~----PvI~~~~~~  398 (473)
                      .+++++.+.+    -   .-|.++..-++.+++..+|+.||+++.   ++..+|+-++..||.||--    |.|-|...|
T Consensus       340 ~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lV---tplrDGMNLvakEyVa~q~~~~G~LiLSeFaG  416 (486)
T COG0380         340 QIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLV---TPLRDGMNLVAKEYVAAQRDKPGVLILSEFAG  416 (486)
T ss_pred             HHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeee---ccccccccHHHHHHHHhhcCCCCcEEEecccc
Confidence            2333333332    1   246666666899999999999999999   8899999999999999854    788888877


Q ss_pred             cccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHH
Q 011979          399 IEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKK  438 (473)
Q Consensus       399 ~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~  438 (473)
                      .+..+.+   .++++  |.++++++|.+.++.   .++++++
T Consensus       417 aa~~L~~---AliVNP~d~~~va~ai~~AL~m---~~eEr~~  452 (486)
T COG0380         417 AASELRD---ALIVNPWDTKEVADAIKRALTM---SLEERKE  452 (486)
T ss_pred             chhhhcc---CEeECCCChHHHHHHHHHHhcC---CHHHHHH
Confidence            7777744   57776  799999999999987   4555544

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length

Probab=98.18  E-value=0.00048  Score=70.34  Aligned_cols=274  Identities=19%  Similarity=0.162  Sum_probs=147.3

Q ss_pred             HHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhCCCC
Q 011979           24 QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPD  103 (473)
Q Consensus        24 ~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D  103 (473)
                      .+..|.++ ||+|.|.|..... ..++.+..|++...+..+     +.....+.+...    .+...+. .+. +..+||
T Consensus        19 ~I~eL~~~-GheV~it~R~~~~-~~~LL~~yg~~y~~iG~~-----g~~~~~Kl~~~~----~R~~~l~-~~~-~~~~pD   85 (335)
T PF04007_consen   19 IIRELEKR-GHEVLITARDKDE-TEELLDLYGIDYIVIGKH-----GDSLYGKLLESI----ERQYKLL-KLI-KKFKPD   85 (335)
T ss_pred             HHHHHHhC-CCEEEEEEeccch-HHHHHHHcCCCeEEEcCC-----CCCHHHHHHHHH----HHHHHHH-HHH-HhhCCC
Confidence            34566665 9999998865433 346777889999888722     111111222211    1111121 222 237899


Q ss_pred             EEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHH
Q 011979          104 VFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ  183 (473)
Q Consensus       104 vi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~  183 (473)
                      ++++.+.+.      +..++...++|.|.-..+-.- .      .          ..+.....||.+++..-.-...+.+
T Consensus        86 v~is~~s~~------a~~va~~lgiP~I~f~D~e~a-~------~----------~~~Lt~Pla~~i~~P~~~~~~~~~~  142 (335)
T PF04007_consen   86 VAISFGSPE------AARVAFGLGIPSIVFNDTEHA-I------A----------QNRLTLPLADVIITPEAIPKEFLKR  142 (335)
T ss_pred             EEEecCcHH------HHHHHHHhCCCeEEEecCchh-h------c----------cceeehhcCCeeECCcccCHHHHHh
Confidence            999877322      234466778998875544310 0      0          0123335788888776555544444


Q ss_pred             HhCCceEEe-eCCCC-----CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCC
Q 011979          184 NWGIKATVL-YDQPP-----EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR  257 (473)
Q Consensus       184 ~~g~~~~vi-~n~~~-----~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (473)
                       +|.+..+. |+|-.     ..|.|.     .++.++||                                    +. +.
T Consensus       143 -~G~~~~i~~y~G~~E~ayl~~F~Pd-----~~vl~~lg------------------------------------~~-~~  179 (335)
T PF04007_consen  143 -FGAKNQIRTYNGYKELAYLHPFKPD-----PEVLKELG------------------------------------LD-DE  179 (335)
T ss_pred             -cCCcCCEEEECCeeeEEeecCCCCC-----hhHHHHcC------------------------------------CC-CC
Confidence             67663344 66632     124443     23444444                                    11 22


Q ss_pred             CeEEEEEeeccCCC------CHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHH
Q 011979          258 PALVVSSTSWTPDE------DFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY  331 (473)
Q Consensus       258 ~~~i~~~G~~~~~K------~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l  331 (473)
                      |.+++   |..+.+      .-+.+-+.++.+.+                            ..+. ++++...++..  
T Consensus       180 ~yIvv---R~~~~~A~y~~~~~~i~~~ii~~L~~----------------------------~~~~-vV~ipr~~~~~--  225 (335)
T PF04007_consen  180 PYIVV---RPEAWKASYDNGKKSILPEIIEELEK----------------------------YGRN-VVIIPRYEDQR--  225 (335)
T ss_pred             CEEEE---EeccccCeeecCccchHHHHHHHHHh----------------------------hCce-EEEecCCcchh--
Confidence            32333   222211      12334455666655                            2333 55665444322  


Q ss_pred             HHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC---ccccceecCCc
Q 011979          332 EEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS---CIEELVKVDKN  408 (473)
Q Consensus       332 ~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~---~~~e~i~~~~~  408 (473)
                       +..++++   +.+...   .-+...++.-||++|-    +.    |+-..||...|+|.|.+-.+   +..+.+.+.  
T Consensus       226 -~~~~~~~---~~i~~~---~vd~~~Ll~~a~l~Ig----~g----gTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~~--  288 (335)
T PF04007_consen  226 -ELFEKYG---VIIPPE---PVDGLDLLYYADLVIG----GG----GTMAREAALLGTPAISCFPGKLLAVDKYLIEK--  288 (335)
T ss_pred             -hHHhccC---ccccCC---CCCHHHHHHhcCEEEe----CC----cHHHHHHHHhCCCEEEecCCcchhHHHHHHHC--
Confidence             2333333   444433   4466689999999996    22    35789999999999987432   333444433  


Q ss_pred             eEEe--CCHHHHHHHHHHHHh
Q 011979          409 GLLF--SSSSELADQLLMLFK  427 (473)
Q Consensus       409 G~~~--~~~~~la~~i~~l~~  427 (473)
                      |+++  .|++++.+.+.+...
T Consensus       289 Gll~~~~~~~ei~~~v~~~~~  309 (335)
T PF04007_consen  289 GLLYHSTDPDEIVEYVRKNLG  309 (335)
T ss_pred             CCeEecCCHHHHHHHHHHhhh
Confidence            5555  478888886655443

They are found in archaea and some bacteria and have no known function.

>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional

Probab=98.15  E-value=0.0016  Score=70.47  Aligned_cols=90  Identities=12%  Similarity=0.123  Sum_probs=62.3

Q ss_pred             CcEEEecCCCCcccHHHHH--hcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----CccccceecCCceEEeC-
Q 011979          341 KRVAFRTMWLSAEDYPLLL--GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVDKNGLLFS-  413 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l--~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i~~~~~G~~~~-  413 (473)
                      +||.+.+ |+|+.+   ++  ..++++|.   .. |   ...+.||+.+|+|+|+...    ......+...+.|...+ 
T Consensus       346 ~Nv~i~~-w~Pq~~---lL~hp~v~~fIt---HG-G---~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~  414 (507)
T PHA03392        346 ANVLTQK-WFPQRA---VLKHKNVKAFVT---QG-G---VQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDT  414 (507)
T ss_pred             CceEEec-CCCHHH---HhcCCCCCEEEe---cC-C---cccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEecc
Confidence            6888875 698865   55  45788886   22 2   1288999999999999863    33455566667787764 


Q ss_pred             ---CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011979          414 ---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE  445 (473)
Q Consensus       414 ---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~  445 (473)
                         +.+++.++|.+++++    +.-++..++-+..
T Consensus       415 ~~~t~~~l~~ai~~vl~~----~~y~~~a~~ls~~  445 (507)
T PHA03392        415 VTVSAAQLVLAIVDVIEN----PKYRKNLKELRHL  445 (507)
T ss_pred             CCcCHHHHHHHHHHHhCC----HHHHHHHHHHHHH
Confidence               589999999999985    4444444333333

>COG4671 Predicted glycosyl transferase [General function prediction only]

Probab=98.14  E-value=0.00037  Score=70.13  Aligned_cols=333  Identities=15%  Similarity=0.145  Sum_probs=168.6

Q ss_pred             CCCCCeEEEEEe--cCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcc---h
Q 011979            1 MGRRGRACVVVL--GDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPK---V   74 (473)
Q Consensus         1 m~~~~~~~i~~~--~~~g~s~r~~~~a~~L~~~-~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~---~   74 (473)
                      |.+++|++..+-  -.+|+-.|....|.+|.+. .|.+|.+|+-.  ++........||.+.++|.-....++...   .
T Consensus         6 ~~~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~--~~~~~F~~~~gVd~V~LPsl~k~~~G~~~~~d~   83 (400)
T COG4671           6 ASKRPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGG--PPAGGFPGPAGVDFVKLPSLIKGDNGEYGLVDL   83 (400)
T ss_pred             hhccceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCC--CccCCCCCcccCceEecCceEecCCCceeeeec
Confidence            345555554433  3467888999999999886 68999999843  22333334568999998832111111110   1


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhh--CCCeEEEEecCchhhhhhhhcCCCchH
Q 011979           75 LKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHF  152 (473)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~--~~~~~i~~~h~~~~~~~~~~~~~~~~~  152 (473)
                      --.+....+...+   ++...+ +..+||++++...|.-.-.-+.-.+..+  ...+.+.-..+... ...   .....+
T Consensus        84 ~~~l~e~~~~Rs~---lil~t~-~~fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~t~~vL~lr~i~D-~p~---~~~~~w  155 (400)
T COG4671          84 DGDLEETKKLRSQ---LILSTA-ETFKPDIFIVDKFPFGLRFELLPTLEYLKTTGTRLVLGLRSIRD-IPQ---ELEADW  155 (400)
T ss_pred             CCCHHHHHHHHHH---HHHHHH-HhcCCCEEEEeccccchhhhhhHHHHHHhhcCCcceeehHhhhh-chh---hhccch
Confidence            1112333333333   222222 2378999999884432111111122222  23455554444311 000   001111


Q ss_pred             HHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCc----eEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccc
Q 011979          153 VSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK----ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDC  228 (473)
Q Consensus       153 ~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g~~----~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~  228 (473)
                      ++  .-.+..+.++.|.|.+...-.-..+...|+..    .++.|.|-...-.+..                        
T Consensus       156 ~~--~~~~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~~~~~------------------------  209 (400)
T COG4671         156 RR--AETVRLINRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRSLPHL------------------------  209 (400)
T ss_pred             hh--hHHHHHHHHhheEEEEecCccccChhhcCCccHhhhhheeEeEEeeccCcCC------------------------
Confidence            11  12334444556777666444333333333332    2333333110000000                        


Q ss_pred             cCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhcc
Q 011979          229 VSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISD  308 (473)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  308 (473)
                                         .......+....+++.+|.-.  -|-+++..++.....                       
T Consensus       210 -------------------~~p~~~~pE~~~Ilvs~GGG~--dG~eLi~~~l~A~~~-----------------------  245 (400)
T COG4671         210 -------------------PLPPHEAPEGFDILVSVGGGA--DGAELIETALAAAQL-----------------------  245 (400)
T ss_pred             -------------------CCCCcCCCccceEEEecCCCh--hhHHHHHHHHHHhhh-----------------------
Confidence                               000011123334677766543  344444443333322                       


Q ss_pred             CccccCCCE---EEEEEcCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHH
Q 011979          309 GKQYLYPRL---LFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDM  384 (473)
Q Consensus       309 ~~~~~~~~~---~l~ivG~g~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Ea  384 (473)
                           .+++   -+++.|.---....+++...-.- ++|.+..+   ..++..++..|+..|.   .+.+    +.+.|-
T Consensus       246 -----l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f---~~~~~~ll~gA~~vVS---m~GY----NTvCeI  310 (400)
T COG4671         246 -----LAGLNHKWLIVTGPFMPEAQRQKLLASAPKRPHISIFEF---RNDFESLLAGARLVVS---MGGY----NTVCEI  310 (400)
T ss_pred             -----CCCCCcceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEh---hhhHHHHHHhhheeee---cccc----hhhhHH
Confidence                 1233   36677744333444444443332 79999999   9999999999999997   3322    388999


Q ss_pred             HhcCCcEEEeccCccc--cceec---CCceE---EeC---CHHHHHHHHHHHHhC
Q 011979          385 FGCGLPVCAVSYSCIE--ELVKV---DKNGL---LFS---SSSELADQLLMLFKG  428 (473)
Q Consensus       385 ma~G~PvI~~~~~~~~--e~i~~---~~~G~---~~~---~~~~la~~i~~l~~~  428 (473)
                      +++|||.+........  .++.-   .+-|+   +.+   +++.++++|...++.
T Consensus       311 Ls~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~  365 (400)
T COG4671         311 LSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALAR  365 (400)
T ss_pred             HhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccC
Confidence            9999999998743222  22211   12333   333   488999999988874

>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.11  E-value=0.0004  Score=70.63  Aligned_cols=112  Identities=16%  Similarity=0.257  Sum_probs=91.7

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCC---CcHHHHHHHhcCCcEEEeccCccccceecCCceEEeCCHHH
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLD---LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE  417 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~---~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~~~~~  417 (473)
                      +++...|...+...++.+++..|+.+...+.+--++   +++.++|+++||.|.+++...++.....+++.-+++.|..+
T Consensus       237 ~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~d~kd  316 (373)
T COG4641         237 PNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQDSKD  316 (373)
T ss_pred             chhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEecCHHH
Confidence            467777774556999999999999999533332222   48999999999999999998999999999888888899999


Q ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHH
Q 011979          418 LADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEW  456 (473)
Q Consensus       418 la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~  456 (473)
                      +.+.+.+++.+    ++.++++.+.+.+.+ ..++.+...
T Consensus       317 l~~~~~yll~h----~~erkeiae~~ye~V~~~ht~~~r~  352 (373)
T COG4641         317 LKEKLKYLLNH----PDERKEIAECAYERVLARHTYEERI  352 (373)
T ss_pred             HHHHHHHHhcC----cchHHHHHHhhHHHHHHhccHHHHH
Confidence            99999999997    788999999998877 446655554

>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]

Probab=98.10  E-value=0.00022  Score=74.90  Aligned_cols=141  Identities=16%  Similarity=0.177  Sum_probs=93.3

Q ss_pred             cCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHH
Q 011979          253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE  332 (473)
Q Consensus       253 ~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~  332 (473)
                      ...++|.+++..|+....   ..+++.+-....                            .-+.++++...+ ....  
T Consensus       233 ~~~d~~~vyvslGt~~~~---~~l~~~~~~a~~----------------------------~l~~~vi~~~~~-~~~~--  278 (406)
T COG1819         233 IPADRPIVYVSLGTVGNA---VELLAIVLEALA----------------------------DLDVRVIVSLGG-ARDT--  278 (406)
T ss_pred             hcCCCCeEEEEcCCcccH---HHHHHHHHHHHh----------------------------cCCcEEEEeccc-cccc--
Confidence            355677788888888765   333333222221                            124666776644 1111  


Q ss_pred             HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCC-CCCCCcHHHHHHHhcCCcEEEecc----CccccceecC
Q 011979          333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVD  406 (473)
Q Consensus       333 ~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s-~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i~~~  406 (473)
                          .-++ .|+...+. +|+.+   ++..||++|+   .+ .+     .+.|++.+|+|+|+-..    ...++.+.+-
T Consensus       279 ----~~~~p~n~~v~~~-~p~~~---~l~~ad~vI~---hGG~g-----tt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~  342 (406)
T COG1819         279 ----LVNVPDNVIVADY-VPQLE---LLPRADAVIH---HGGAG-----TTSEALYAGVPLVVIPDGADQPLNAERVEEL  342 (406)
T ss_pred             ----cccCCCceEEecC-CCHHH---HhhhcCEEEe---cCCcc-----hHHHHHHcCCCEEEecCCcchhHHHHHHHHc
Confidence                1224 58888876 76655   8999999998   33 33     88999999999999853    3456777788


Q ss_pred             CceEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          407 KNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       407 ~~G~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      +.|....    +.+.+++++.+++.+    +..++..++....+.
T Consensus       343 G~G~~l~~~~l~~~~l~~av~~vL~~----~~~~~~~~~~~~~~~  383 (406)
T COG1819         343 GAGIALPFEELTEERLRAAVNEVLAD----DSYRRAAERLAEEFK  383 (406)
T ss_pred             CCceecCcccCCHHHHHHHHHHHhcC----HHHHHHHHHHHHHhh
Confidence            8897764    599999999999995    555555444444444

>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]

Probab=98.03  E-value=0.0036  Score=66.75  Aligned_cols=149  Identities=14%  Similarity=0.159  Sum_probs=105.0

Q ss_pred             CCCEEEEEEcCCCCh---HHHHHHHHHcCC--CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcC
Q 011979          314 YPRLLFIITGKGPDK---ESYEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCG  388 (473)
Q Consensus       314 ~~~~~l~ivG~g~~~---~~l~~~~~~~~l--~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G  388 (473)
                      .|+-.|++-|.|++.   ..+++.+++.|+  +++.|.++ .|.++....|.-||+++=    ++-.+=.++.+|++-+|
T Consensus       457 vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~-~~~~~h~a~~~iADlvLD----TyPY~g~TTa~daLwm~  531 (620)
T COG3914         457 VPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPP-APNEDHRARYGIADLVLD----TYPYGGHTTASDALWMG  531 (620)
T ss_pred             CCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCC-CCCHHHHHhhchhheeee----cccCCCccchHHHHHhc
Confidence            689999999987653   678889999999  69999999 999999999999999995    43333456899999999


Q ss_pred             CcEEEeccC------ccccceecCCceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccc-cchH-HHHHHHH
Q 011979          389 LPVCAVSYS------CIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS-ARWA-TEWEEHA  460 (473)
Q Consensus       389 ~PvI~~~~~------~~~e~i~~~~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~w~-~~~~~~~  460 (473)
                      +||++-...      |..-+-.-|..-+++.|.++..+.-..+-++    +..+.+.+...++-.+. -=|+ ..+.+-+
T Consensus       532 vPVlT~~G~~FasR~~~si~~~agi~e~vA~s~~dYV~~av~~g~d----ral~q~~r~~l~~~r~tspL~d~~~far~l  607 (620)
T COG3914         532 VPVLTRVGEQFASRNGASIATNAGIPELVADSRADYVEKAVAFGSD----RALRQQVRAELKRSRQTSPLFDPKAFARKL  607 (620)
T ss_pred             CceeeeccHHHHHhhhHHHHHhcCCchhhcCCHHHHHHHHHHhccc----HHHHHhhHHHHHhccccCcccCHHHHHHHH
Confidence            999986421      1111112233445666777777776767664    66666666655553311 1244 4556677


Q ss_pred             HHHHHHHhhcc
Q 011979          461 KPLITEVISQF  471 (473)
Q Consensus       461 ~~~~~~~~~~~  471 (473)
                      ..++.++.++.
T Consensus       608 e~~y~~M~~~y  618 (620)
T COG3914         608 ETLYWGMWSEY  618 (620)
T ss_pred             HHHHHHHHHhh
Confidence            88888877764

>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A

Probab=98.02  E-value=0.00022  Score=75.44  Aligned_cols=177  Identities=12%  Similarity=0.077  Sum_probs=107.3

Q ss_pred             cccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCC-ChH
Q 011979          251 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKE  329 (473)
Q Consensus       251 ~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~-~~~  329 (473)
                      ..++++. ++++...++  .|--+..++++..+.++                           .|+.+|++...+. ..+
T Consensus       279 ~gLp~d~-vvF~~fn~~--~KI~p~~l~~W~~IL~~---------------------------vP~S~L~L~~~~~~~~~  328 (468)
T PF13844_consen  279 YGLPEDA-VVFGSFNNL--FKISPETLDLWARILKA---------------------------VPNSRLWLLRFPASGEA  328 (468)
T ss_dssp             GT--SSS-EEEEE-S-G--GG--HHHHHHHHHHHHH---------------------------STTEEEEEEETSTTHHH
T ss_pred             cCCCCCc-eEEEecCcc--ccCCHHHHHHHHHHHHh---------------------------CCCcEEEEeeCCHHHHH
Confidence            3444443 244444444  46667778888887774                           6999998876543 346


Q ss_pred             HHHHHHHHcCC--CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCcccc------
Q 011979          330 SYEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE------  401 (473)
Q Consensus       330 ~l~~~~~~~~l--~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e------  401 (473)
                      .+++.+++.|+  +++.|.+. .+.++....++.+|+++=++ |..|   ++..+||+.+|+|||+-....+..      
T Consensus       329 ~l~~~~~~~Gv~~~Ri~f~~~-~~~~ehl~~~~~~DI~LDT~-p~nG---~TTt~dALwmGVPvVTl~G~~~~sR~~aSi  403 (468)
T PF13844_consen  329 RLRRRFAAHGVDPDRIIFSPV-APREEHLRRYQLADICLDTF-PYNG---GTTTLDALWMGVPVVTLPGETMASRVGASI  403 (468)
T ss_dssp             HHHHHHHHTTS-GGGEEEEE----HHHHHHHGGG-SEEE--S-SS-----SHHHHHHHHHT--EEB---SSGGGSHHHHH
T ss_pred             HHHHHHHHcCCChhhEEEcCC-CCHHHHHHHhhhCCEEeeCC-CCCC---cHHHHHHHHcCCCEEeccCCCchhHHHHHH
Confidence            78888999999  69999987 88889999999999999731 1122   679999999999999975322211      


Q ss_pred             ceecCCceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc--cccchHHHHHHHHHHHHHH
Q 011979          402 LVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG--LSARWATEWEEHAKPLITE  466 (473)
Q Consensus       402 ~i~~~~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~w~~~~~~~~~~~~~~  466 (473)
                      +-.-|-.-+++.|.++..+.-.++..+    ++.++++++..++..  +...=...|-+.++..+..
T Consensus       404 L~~lGl~ElIA~s~~eYv~~Av~La~D----~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~  466 (468)
T PF13844_consen  404 LRALGLPELIADSEEEYVEIAVRLATD----PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ  466 (468)
T ss_dssp             HHHHT-GGGB-SSHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred             HHHcCCchhcCCCHHHHHHHHHHHhCC----HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence            111122345667899999999999995    889999988887644  1122223444444444443

>PLN02448 UDP-glycosyltransferase family protein

Probab=97.95  E-value=0.021  Score=61.07  Aligned_cols=115  Identities=16%  Similarity=0.185  Sum_probs=69.9

Q ss_pred             CEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec
Q 011979          316 RLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS  395 (473)
Q Consensus       316 ~~~l~ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~  395 (473)
                      +..++++..++ ...+.+...    +++.+. .|+|+.+   +|...++..+.   +++.  .++++||+++|+|+|+..
T Consensus       303 ~~~~lw~~~~~-~~~~~~~~~----~~~~v~-~w~pQ~~---iL~h~~v~~fv---tHgG--~nS~~eal~~GvP~l~~P  368 (459)
T PLN02448        303 GVRFLWVARGE-ASRLKEICG----DMGLVV-PWCDQLK---VLCHSSVGGFW---THCG--WNSTLEAVFAGVPMLTFP  368 (459)
T ss_pred             CCCEEEEEcCc-hhhHhHhcc----CCEEEe-ccCCHHH---HhccCccceEE---ecCc--hhHHHHHHHcCCCEEecc
Confidence            45777765543 222333221    367677 4798876   45567774442   2221  238999999999999986


Q ss_pred             c----CccccceecC-CceEEe---------CCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          396 Y----SCIEELVKVD-KNGLLF---------SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       396 ~----~~~~e~i~~~-~~G~~~---------~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      .    ......+.+. +.|+-.         -+.+++++++.+++.+   +.++.++|++++.+..
T Consensus       369 ~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~---~~~~~~~~r~~a~~~~  431 (459)
T PLN02448        369 LFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDL---ESEEGKEMRRRAKELQ  431 (459)
T ss_pred             ccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcC---CchhHHHHHHHHHHHH
Confidence            3    2333444332 445544         1578999999999975   2244556777776654

>PRK02797 4-alpha-L-fucosyltransferase; Provisional

Probab=97.93  E-value=0.0031  Score=63.00  Aligned_cols=230  Identities=15%  Similarity=0.146  Sum_probs=133.1

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH  179 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~  179 (473)
                      .+.+-+++|+-.. +.+..+.+..+.+  +-=+.||-++-.++   -...+...+++..+.+...++..+|+++.....-
T Consensus        38 ~r~~rff~HGqFn-~~lwlall~g~~~--~~q~yWhiWGaDLY---e~~~~lk~rlfy~lRR~aq~rvg~v~atrGD~~~  111 (322)
T PRK02797         38 NRAQRFFLHGQFN-PTLWLALLSGKIK--PKQFYWHIWGADLY---EESKGLKFRLFYPLRRLAQKRVGHVFATRGDLSY  111 (322)
T ss_pred             CccceEEEecCCC-HHHHHHHHhCCcC--ccceEEEEEChhhh---hcccchhHHHHHHHHHHHHhhcCeEEEecchHHH
Confidence            6778888888443 2222233332222  22345665553332   1123444567778889988999999994444443


Q ss_pred             HHHHHhCCceEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCe
Q 011979          180 ELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPA  259 (473)
Q Consensus       180 ~l~~~~g~~~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (473)
                      +-++.++++...++-       |+..........                                     ....+..+.
T Consensus       112 ~a~~~~~v~~~llyf-------pt~m~~~l~~~~-------------------------------------~~~~~~~~~  147 (322)
T PRK02797        112 FAQRHPKVPGSLLYF-------PTRMDPSLNTMA-------------------------------------NDRQRAGKM  147 (322)
T ss_pred             HHHhcCCCCccEEec-------CCcchhhhcccc-------------------------------------ccccCCCce
Confidence            345666777554332       111100000000                                     001122333


Q ss_pred             EEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEE-cCC--C--ChHHHHHH
Q 011979          260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKG--P--DKESYEEK  334 (473)
Q Consensus       260 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv-G~g--~--~~~~l~~~  334 (473)
                      .|+..-+-++..++..++++++..                             ...++++++. |.+  .  +.+++++.
T Consensus       148 tIlvGNSgd~SN~Hie~L~~l~~~-----------------------------~~~~v~ii~PlsYp~gn~~Yi~~V~~~  198 (322)
T PRK02797        148 TILVGNSGDRSNRHIEALRALHQQ-----------------------------FGDNVKIIVPMGYPANNQAYIEEVRQA  198 (322)
T ss_pred             EEEEeCCCCCcccHHHHHHHHHHH-----------------------------hCCCeEEEEECCcCCCCHHHHHHHHHH
Confidence            444444455666676666666665                             3467887765 442  2  22445555


Q ss_pred             HHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc-CccccceecCCceEEe
Q 011979          335 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCIEELVKVDKNGLLF  412 (473)
Q Consensus       335 ~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~-~~~~e~i~~~~~G~~~  412 (473)
                      ++++-- +++..+...+|.+|+.++++.+|++++.+  ....++|+ +.=.+..|+||+.+.. +-..++. +.+.-+++
T Consensus       199 ~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~--~RQQgiGn-l~lLi~~G~~v~l~r~n~fwqdl~-e~gv~Vlf  274 (322)
T PRK02797        199 GLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIF--ARQQGIGT-LCLLIQLGKPVVLSRDNPFWQDLT-EQGLPVLF  274 (322)
T ss_pred             HHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEee--chhhHHhH-HHHHHHCCCcEEEecCCchHHHHH-hCCCeEEe
Confidence            555544 68988888899999999999999999953  35666775 4557899999999964 4445544 33444444

>PLN02208 glycosyltransferase family protein

Probab=97.90  E-value=0.051  Score=57.83  Aligned_cols=114  Identities=13%  Similarity=0.170  Sum_probs=71.4

Q ss_pred             cEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----Cccccce-ecCCceEEeC---
Q 011979          342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELV-KVDKNGLLFS---  413 (473)
Q Consensus       342 ~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i-~~~~~G~~~~---  413 (473)
                      ++.+. .|+|+.+   +|+...+..+   -+++.  -++++||+++|+|+|+...    ......+ ..-+.|+..+   
T Consensus       312 g~~v~-~W~PQ~~---iL~H~~v~~F---vtHcG--~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~  382 (442)
T PLN02208        312 GVVWG-GWVQQPL---ILDHPSIGCF---VNHCG--PGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK  382 (442)
T ss_pred             CcEee-ccCCHHH---HhcCCccCeE---EccCC--chHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc
Confidence            45554 5799877   6777877666   23321  2499999999999999863    2233433 3346676662   


Q ss_pred             ----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Q 011979          414 ----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV  467 (473)
Q Consensus       414 ----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~  467 (473)
                          +.++++++|.+++++   +.+..+++++++++..+...=.-+=...+..+++++
T Consensus       383 ~~~~~~~~l~~ai~~~m~~---~~e~g~~~r~~~~~~~~~~~~~gsS~~~l~~~v~~l  437 (442)
T PLN02208        383 TGWFSKESLSNAIKSVMDK---DSDLGKLVRSNHTKLKEILVSPGLLTGYVDKFVEEL  437 (442)
T ss_pred             CCcCcHHHHHHHHHHHhcC---CchhHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence                578999999999975   235567788877765522210111222355665555

>PLN02173 UDP-glucosyl transferase family protein

Probab=97.79  E-value=0.077  Score=56.53  Aligned_cols=93  Identities=12%  Similarity=0.198  Sum_probs=61.6

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----CccccceecC-CceEEeC--
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVD-KNGLLFS--  413 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i~~~-~~G~~~~--  413 (473)
                      +++.+. .|+|+.+   +|...++..+.   +++.  .++++||+++|+|+|+...    ......+.+. +.|+-..  
T Consensus       317 ~~~~i~-~W~PQ~~---iL~H~~v~~Fv---tHcG--wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~  387 (449)
T PLN02173        317 DKSLVL-KWSPQLQ---VLSNKAIGCFM---THCG--WNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE  387 (449)
T ss_pred             CceEEe-CCCCHHH---HhCCCccceEE---ecCc--cchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec
Confidence            467777 4899766   67777766652   3221  2499999999999999863    3344445432 4555541  


Q ss_pred             ------CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          414 ------SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       414 ------~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                            +.+++++++.+++.+    + +.+++++++++..
T Consensus       388 ~~~~~~~~e~v~~av~~vm~~----~-~~~~~r~~a~~~~  422 (449)
T PLN02173        388 KESGIAKREEIEFSIKEVMEG----E-KSKEMKENAGKWR  422 (449)
T ss_pred             ccCCcccHHHHHHHHHHHhcC----C-hHHHHHHHHHHHH
Confidence                  578999999999975    2 2356666666544

>PRK10017 colanic acid biosynthesis protein; Provisional

Probab=97.78  E-value=0.034  Score=58.86  Aligned_cols=103  Identities=13%  Similarity=0.093  Sum_probs=65.7

Q ss_pred             HHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC----ccccceecC
Q 011979          332 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVD  406 (473)
Q Consensus       332 ~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~----~~~e~i~~~  406 (473)
                      ++..+.+.- .+++++....+..++..+++++|++|-    ..-+    .++=|+++|+|+|+-.+.    ++.+.+.- 
T Consensus       297 ~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig----~RlH----a~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~-  367 (426)
T PRK10017        297 LNLRQHVSDPARYHVVMDELNDLEMGKILGACELTVG----TRLH----SAIISMNFGTPAIAINYEHKSAGIMQQLGL-  367 (426)
T ss_pred             HHHHHhcccccceeEecCCCChHHHHHHHhhCCEEEE----ecch----HHHHHHHcCCCEEEeeehHHHHHHHHHcCC-
Confidence            444455443 344443221456688899999999996    3333    678899999999998743    33333322 


Q ss_pred             CceEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          407 KNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       407 ~~G~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                       ..++.+    +.+++.+.+.+++++   .++.++++.++..+..
T Consensus       368 -~~~~~~~~~l~~~~Li~~v~~~~~~---r~~~~~~l~~~v~~~r  408 (426)
T PRK10017        368 -PEMAIDIRHLLDGSLQAMVADTLGQ---LPALNARLAEAVSRER  408 (426)
T ss_pred             -ccEEechhhCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHH
Confidence             223332    477899999999986   3445556666666644

>PRK14089 ipid-A-disaccharide synthase; Provisional

Probab=97.70  E-value=0.0016  Score=66.89  Aligned_cols=184  Identities=13%  Similarity=0.034  Sum_probs=106.3

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhC-CCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~-~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      .+||+++.-+.|.+... +++.+++.. ++|++|.+-.--|     .++. ...        +.+.+.+|.++|+=+...
T Consensus        75 ~~pd~~i~iD~p~Fnl~-lak~~k~~~~~i~viyyi~PqvW-----AWr~-~R~--------~~i~k~~d~vl~ifPFE~  139 (347)
T PRK14089         75 KQADKVLLMDSSSFNIP-LAKKIKKAYPKKEIIYYILPQVW-----AWKK-GRA--------KILEKYCDFLASILPFEV  139 (347)
T ss_pred             cCCCEEEEeCCCCCCHH-HHHHHHhcCCCCCEEEEECccce-----eeCc-chH--------HHHHHHHhhhhccCCCCH
Confidence            78999988776766655 455555543 7999886554322     1111 111        233456777777665444


Q ss_pred             HHHHHHhCCceEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCC
Q 011979          179 HELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRP  258 (473)
Q Consensus       179 ~~l~~~~g~~~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (473)
                      +.+    |.+++++-+...+...+.    +.                                          .+. +.|
T Consensus       140 ~~y----g~~~~~VGhPl~d~~~~~----~~------------------------------------------~~~-~~~  168 (347)
T PRK14089        140 QFY----QSKATYVGHPLLDEIKEF----KK------------------------------------------DLD-KEG  168 (347)
T ss_pred             HHh----CCCCEEECCcHHHhhhhh----hh------------------------------------------hcC-CCC
Confidence            444    666554422111111000    00                                          011 124


Q ss_pred             eEEEEEeeccC--CCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHHH
Q 011979          259 ALVVSSTSWTP--DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR  336 (473)
Q Consensus       259 ~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~  336 (473)
                      .+.+.-||-..  .+....+++++..+.++                             ...+++.|... .+.+++...
T Consensus       169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~-----------------------------~~~~~i~~a~~-~~~i~~~~~  218 (347)
T PRK14089        169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGK-----------------------------EKILVVPSFFK-GKDLKEIYG  218 (347)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHHHHHhhc-----------------------------CcEEEEeCCCc-HHHHHHHHh
Confidence            57777777543  24566777888887651                             26788887643 345555544


Q ss_pred             HcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec
Q 011979          337 RLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS  395 (473)
Q Consensus       337 ~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~  395 (473)
                      +.  ..+.+.      ++..++++.||+.++   .|     |++.+|++.+|+|.|..-
T Consensus       219 ~~--~~~~~~------~~~~~~m~~aDlal~---~S-----GT~TLE~al~g~P~Vv~Y  261 (347)
T PRK14089        219 DI--SEFEIS------YDTHKALLEAEFAFI---CS-----GTATLEAALIGTPFVLAY  261 (347)
T ss_pred             cC--CCcEEe------ccHHHHHHhhhHHHh---cC-----cHHHHHHHHhCCCEEEEE
Confidence            32  234443      255789999999997   32     447779999999999964

>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long)

Probab=97.60  E-value=0.026  Score=57.30  Aligned_cols=246  Identities=16%  Similarity=0.171  Sum_probs=138.5

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      ..+.+-++.|+-... .+..+.+..+.+..+  +.||-++-.++.   ...+...+++..+.+.+.++..+|++ ++..-
T Consensus        76 ~~r~~kff~HGqFn~-~lwlaLl~g~~~~~k--~~WhIWGaDLYe---~~~~~k~rlfy~lRr~aq~rvg~V~a-t~GDl  148 (360)
T PF07429_consen   76 ADRADKFFLHGQFNP-WLWLALLFGKIKLKK--CYWHIWGADLYE---DSRSLKFRLFYFLRRLAQKRVGHVFA-TRGDL  148 (360)
T ss_pred             hCccceEEEeccCcH-HHHHHHHcCCccccc--eEEEEeCchhhc---cccccchhHHHHHHHHHHhhcCeEEE-EcchH
Confidence            378888888885433 232343443333333  345555422221   12233345556778888888888876 55666


Q ss_pred             HHHHHHhCCc-eEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCC
Q 011979          179 HELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR  257 (473)
Q Consensus       179 ~~l~~~~g~~-~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (473)
                      .++++.++.. ...++.       |+..+......   .                                  .......
T Consensus       149 ~~~~q~~~~~~~~~lyf-------Pt~m~~~~~~~---~----------------------------------~~~~~~~  184 (360)
T PF07429_consen  149 AYFQQRYPRVPASLLYF-------PTRMDPALTLS---E----------------------------------KNKKNKG  184 (360)
T ss_pred             HHHHHHcCCCCceEEEc-------CCCCchhhhcc---c----------------------------------cccCCCC
Confidence            6777777543 333322       21110000000   0                                  0011223


Q ss_pred             CeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEE-cCCCCh----HHHH
Q 011979          258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDK----ESYE  332 (473)
Q Consensus       258 ~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv-G~g~~~----~~l~  332 (473)
                      +..|+..-+-++..+.-..+++++..                             ...++++++- |.|...    ++++
T Consensus       185 ~ltILvGNSgd~sNnHieaL~~L~~~-----------------------------~~~~~kIivPLsYg~~n~~Yi~~V~  235 (360)
T PF07429_consen  185 KLTILVGNSGDPSNNHIEALEALKQQ-----------------------------FGDDVKIIVPLSYGANNQAYIQQVI  235 (360)
T ss_pred             ceEEEEcCCCCCCccHHHHHHHHHHh-----------------------------cCCCeEEEEECCCCCchHHHHHHHH
Confidence            43454444556666676666666653                             2356776653 555422    4445


Q ss_pred             HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEE
Q 011979          333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL  411 (473)
Q Consensus       333 ~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~  411 (473)
                      +.++++-- +++..+..++|.+|+.++++.+|++++.  .....++|+ +.=.+.+|+||+-+..........+.+.-++
T Consensus       236 ~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~--~~RQQgiGn-I~lLl~~G~~v~L~~~np~~~~l~~~~ipVl  312 (360)
T PF07429_consen  236 QAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFN--HNRQQGIGN-ICLLLQLGKKVFLSRDNPFWQDLKEQGIPVL  312 (360)
T ss_pred             HHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEe--echhhhHhH-HHHHHHcCCeEEEecCChHHHHHHhCCCeEE
Confidence            55555432 5888876559999999999999999995  236677774 5568999999999976555555544444444


Q ss_pred             eC----CHHHHHHHHHHHHh
Q 011979          412 FS----SSSELADQLLMLFK  427 (473)
Q Consensus       412 ~~----~~~~la~~i~~l~~  427 (473)
                      +.    |...+.++=.++..
T Consensus       313 f~~d~L~~~~v~ea~rql~~  332 (360)
T PF07429_consen  313 FYGDELDEALVREAQRQLAN  332 (360)
T ss_pred             eccccCCHHHHHHHHHHHhh
Confidence            43    24444444444433

This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall

>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II

Probab=97.55  E-value=0.011  Score=60.09  Aligned_cols=102  Identities=17%  Similarity=0.128  Sum_probs=68.7

Q ss_pred             CCCCeEEEEEee-ccCCCCHH--HHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHH
Q 011979          255 PNRPALVVSSTS-WTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY  331 (473)
Q Consensus       255 ~~~~~~i~~~G~-~~~~K~~~--~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l  331 (473)
                      +++|.+++..|. ..+.|.+.  -..+.++.+.+                             .+..++++|...+.+..
T Consensus       172 ~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~-----------------------------~~~~ivl~G~~~e~~~~  222 (334)
T TIGR02195       172 TERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID-----------------------------QGYQVVLFGSAKDHPAG  222 (334)
T ss_pred             CCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH-----------------------------CCCEEEEEEChhhHHHH
Confidence            346667777766 44666543  56666666544                             24678899976665555


Q ss_pred             HHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe
Q 011979          332 EEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV  394 (473)
Q Consensus       332 ~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~  394 (473)
                      ++..+..+-..+.+.|. .+-.++..+++.||++|.   ..++     .+==|.|.|+|+|+-
T Consensus       223 ~~i~~~~~~~~~~l~g~-~sL~el~ali~~a~l~I~---~DSG-----p~HlAaA~~~P~i~l  276 (334)
T TIGR02195       223 NEIEALLPGELRNLAGE-TSLDEAVDLIALAKAVVT---NDSG-----LMHVAAALNRPLVAL  276 (334)
T ss_pred             HHHHHhCCcccccCCCC-CCHHHHHHHHHhCCEEEe---eCCH-----HHHHHHHcCCCEEEE
Confidence            55544433223446676 788999999999999998   4555     334477999999986

This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>PLN02562 UDP-glycosyltransferase

Probab=97.49  E-value=0.2  Score=53.37  Aligned_cols=79  Identities=14%  Similarity=0.137  Sum_probs=54.2

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----Cccccceec-CCceEEeC--
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKV-DKNGLLFS--  413 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i~~-~~~G~~~~--  413 (473)
                      +|+.+. .|+|+.+   +|...++..+.   +++.  -++++||+.+|+|+|+...    ......+.+ -+.|+-..  
T Consensus       328 ~~~~v~-~w~PQ~~---iL~h~~v~~fv---tH~G--~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~  398 (448)
T PLN02562        328 KQGKVV-SWAPQLE---VLKHQAVGCYL---THCG--WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGF  398 (448)
T ss_pred             cCEEEE-ecCCHHH---HhCCCccceEE---ecCc--chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCC
Confidence            477676 4798876   45666665552   2221  2389999999999999852    334444433 35666664  


Q ss_pred             CHHHHHHHHHHHHhC
Q 011979          414 SSSELADQLLMLFKG  428 (473)
Q Consensus       414 ~~~~la~~i~~l~~~  428 (473)
                      +.+++++++.+++.+
T Consensus       399 ~~~~l~~~v~~~l~~  413 (448)
T PLN02562        399 GQKEVEEGLRKVMED  413 (448)
T ss_pred             CHHHHHHHHHHHhCC
Confidence            588999999999974

>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional

Probab=97.44  E-value=0.13  Score=52.82  Aligned_cols=100  Identities=10%  Similarity=0.018  Sum_probs=64.3

Q ss_pred             CCeEEEEEeeccCCCCH--HHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC--hHHHH
Q 011979          257 RPALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYE  332 (473)
Q Consensus       257 ~~~~i~~~G~~~~~K~~--~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~--~~~l~  332 (473)
                      ++.+++..|.-...|.+  +...+.++.+.+                             .+..++++|...+  .+..+
T Consensus       183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~-----------------------------~~~~vvl~ggp~e~e~~~~~  233 (352)
T PRK10422        183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA-----------------------------RGYEVVLTSGPDKDDLACVN  233 (352)
T ss_pred             CCeEEEecCCCccccCCCHHHHHHHHHHHHH-----------------------------CCCeEEEEcCCChHHHHHHH
Confidence            35577777765566654  355555555543                             2567888875322  22234


Q ss_pred             HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe
Q 011979          333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV  394 (473)
Q Consensus       333 ~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~  394 (473)
                      +.++.... ..+.+.|. .+-.++..+++.||++|.   ..+|     .+==|.|+|+|+|+-
T Consensus       234 ~i~~~~~~~~~~~l~g~-~sL~el~ali~~a~l~v~---nDSG-----p~HlAaA~g~P~v~l  287 (352)
T PRK10422        234 EIAQGCQTPPVTALAGK-TTFPELGALIDHAQLFIG---VDSA-----PAHIAAAVNTPLICL  287 (352)
T ss_pred             HHHHhcCCCccccccCC-CCHHHHHHHHHhCCEEEe---cCCH-----HHHHHHHcCCCEEEE
Confidence            44443332 23556777 789999999999999998   5565     334477899999986

>COG1817 Uncharacterized protein conserved in archaea [Function unknown]

Probab=97.34  E-value=0.083  Score=52.78  Aligned_cols=288  Identities=16%  Similarity=0.147  Sum_probs=153.5

Q ss_pred             CCCCChhHHH---HHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchh-HHHHHHHHHHHHHH
Q 011979           14 DLGRSPRMQY---QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVL-KPVLLLLKPLIQFF   89 (473)
Q Consensus        14 ~~g~s~r~~~---~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   89 (473)
                      |++.++.+..   ....|.++ ||+|.+.|..... ..++.+-.|+....+..     .+...+. +.+....+..    
T Consensus         6 DI~n~~hvhfFk~lI~elekk-G~ev~iT~rd~~~-v~~LLd~ygf~~~~Igk-----~g~~tl~~Kl~~~~eR~~----   74 (346)
T COG1817           6 DIGNPPHVHFFKNLIWELEKK-GHEVLITCRDFGV-VTELLDLYGFPYKSIGK-----HGGVTLKEKLLESAERVY----   74 (346)
T ss_pred             EcCCcchhhHHHHHHHHHHhC-CeEEEEEEeecCc-HHHHHHHhCCCeEeecc-----cCCccHHHHHHHHHHHHH----
Confidence            3444444443   34567776 9999987765433 34667777888888872     1111122 2222111111    


Q ss_pred             HHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCE
Q 011979           90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANG  169 (473)
Q Consensus        90 ~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~  169 (473)
                       .+..+.. ..+||+.+.-+.+.++-.      +...++|.|+-.-+-+. .                .-.+.....|+.
T Consensus        75 -~L~ki~~-~~kpdv~i~~~s~~l~rv------afgLg~psIi~~D~ehA-~----------------~qnkl~~Pla~~  129 (346)
T COG1817          75 -KLSKIIA-EFKPDVAIGKHSPELPRV------AFGLGIPSIIFVDNEHA-E----------------AQNKLTLPLADV  129 (346)
T ss_pred             -HHHHHHh-hcCCceEeecCCcchhhH------HhhcCCceEEecCChhH-H----------------HHhhcchhhhhh
Confidence             1122222 278998886443333322      44456777763333210 0                114556678898


Q ss_pred             EEEcCHHHHHHHHHHhCCc-e-EEeeCCCC-----CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchh
Q 011979          170 CLCVTQAMQHELAQNWGIK-A-TVLYDQPP-----EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETI  242 (473)
Q Consensus       170 vi~vS~~~~~~l~~~~g~~-~-~vi~n~~~-----~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (473)
                      +++.+......+.. +|.+ . .+-+++..     ..|.|.     .+..++||.                         
T Consensus       130 ii~P~~~~~~~~~~-~G~~p~~i~~~~giae~~~v~~f~pd-----~evlkeLgl-------------------------  178 (346)
T COG1817         130 IITPEAIDEEELLD-FGADPNKISGYNGIAELANVYGFVPD-----PEVLKELGL-------------------------  178 (346)
T ss_pred             eecccccchHHHHH-hCCCccceecccceeEEeecccCCCC-----HHHHHHcCC-------------------------
Confidence            88888877777766 4554 3 33344422     235443     345555652                         


Q ss_pred             hhcccccccccCCCCCeEEEEE---ee--ccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCE
Q 011979          243 FTSLAGIDVFLKPNRPALVVSS---TS--WTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL  317 (473)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~i~~~---G~--~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (473)
                                 ..+.+.+++=.   |.  ....++.+.+-+++.++.+                            .+  
T Consensus       179 -----------~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k----------------------------~g--  217 (346)
T COG1817         179 -----------EEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKK----------------------------YG--  217 (346)
T ss_pred             -----------CCCCceEEEeeccccceeeccccchhhHHHHHHHHHh----------------------------Cc--
Confidence                       22233233211   11  2234566677888888766                            23  


Q ss_pred             EEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC
Q 011979          318 LFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS  397 (473)
Q Consensus       318 ~l~ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~  397 (473)
                       .+++-   ..+..++..+++.  ++...   -+..|-.+++--|++.+-    ..    |+-.-||...|+|.|++.-|
T Consensus       218 -iV~ip---r~~~~~eife~~~--n~i~p---k~~vD~l~Llyya~lvig----~g----gTMarEaAlLGtpaIs~~pG  280 (346)
T COG1817         218 -IVLIP---REKEQAEIFEGYR--NIIIP---KKAVDTLSLLYYATLVIG----AG----GTMAREAALLGTPAISCYPG  280 (346)
T ss_pred             -EEEec---CchhHHHHHhhhc--cccCC---cccccHHHHHhhhheeec----CC----chHHHHHHHhCCceEEecCC
Confidence             33333   2333455555443  33322   224555557777888774    22    34668999999999999622


Q ss_pred             ---ccccceecCCceEEeC--CHHHHHHHHHHHHhC
Q 011979          398 ---CIEELVKVDKNGLLFS--SSSELADQLLMLFKG  428 (473)
Q Consensus       398 ---~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~  428 (473)
                         +..++..+  .|.++.  |+.+..+...+.+..
T Consensus       281 kll~vdk~lie--~G~~~~s~~~~~~~~~a~~~l~~  314 (346)
T COG1817         281 KLLAVDKYLIE--KGLLYHSTDEIAIVEYAVRNLKY  314 (346)
T ss_pred             ccccccHHHHh--cCceeecCCHHHHHHHHHHHhhc
Confidence               34444433  566764  566666666666553

>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=97.33  E-value=0.32  Score=51.93  Aligned_cols=93  Identities=13%  Similarity=0.225  Sum_probs=60.4

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----CccccceecC-CceEEeC--
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVD-KNGLLFS--  413 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i~~~-~~G~~~~--  413 (473)
                      +|..+. .|+|+.+   ++...++..+.   +++-  -++++||+++|+|+|+...    ......+.+. +.|+..+  
T Consensus       324 ~~g~v~-~w~PQ~~---iL~h~~v~~fv---tH~G--~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~  394 (451)
T PLN02410        324 GRGYIV-KWAPQKE---VLSHPAVGGFW---SHCG--WNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGD  394 (451)
T ss_pred             CCeEEE-ccCCHHH---HhCCCccCeee---ecCc--hhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCc
Confidence            466666 4899987   56666664442   2221  2389999999999999863    2333444333 6777763  


Q ss_pred             -CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          414 -SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       414 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                       +.+++++++.+++.+    ++ .+++++++++..
T Consensus       395 ~~~~~v~~av~~lm~~----~~-~~~~r~~a~~l~  424 (451)
T PLN02410        395 LDRGAVERAVKRLMVE----EE-GEEMRKRAISLK  424 (451)
T ss_pred             ccHHHHHHHHHHHHcC----Cc-HHHHHHHHHHHH
Confidence             588999999999975    22 345555555543

>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2

Probab=97.26  E-value=0.00039  Score=67.96  Aligned_cols=81  Identities=17%  Similarity=0.129  Sum_probs=46.6

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhC-------CCeEEEEecCchhhhhh-h-hc---C-CCchH--------HHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLR-------RSAFIVDWHNFGYTLLS-L-SL---G-RRSHF--------VSIYRW  158 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~-------~~~~i~~~h~~~~~~~~-~-~~---~-~~~~~--------~~~~~~  158 (473)
                      .+||+||+|+   +.+..+..+++...       ++|+++++|+..|.-.. . ..   + +...+        .... .
T Consensus       132 ~~pDIIH~hD---W~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~i-n  207 (245)
T PF08323_consen  132 WKPDIIHCHD---WHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQI-N  207 (245)
T ss_dssp             -S-SEEEEEC---GGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEE-E
T ss_pred             CCCCEEEecC---chHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhcccccccccccc-C
Confidence            4799999999   55555555555543       59999999997531100 0 00   0 00000        0000 1


Q ss_pred             HHHHHhhcCCEEEEcCHHHHHHHHHH
Q 011979          159 IEKYYGKMANGCLCVTQAMQHELAQN  184 (473)
Q Consensus       159 ~e~~~~~~ad~vi~vS~~~~~~l~~~  184 (473)
                      +.+.-...||.|.|||+.+++++.+.
T Consensus       208 ~lk~gi~~AD~v~TVS~~Ya~Ei~~~  233 (245)
T PF08323_consen  208 FLKAGIVYADKVTTVSPTYAREIQTP  233 (245)
T ss_dssp             HHHHHHHHSSEEEESSHHHHHHTTSH
T ss_pred             HHHHHHHhcCEeeeCCHHHHHHHhCc
Confidence            23455568999999999999888654

4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....

>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=97.25  E-value=9e-06  Score=74.31  Aligned_cols=89  Identities=16%  Similarity=0.303  Sum_probs=60.3

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc--------cccceecCCceEEe
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC--------IEELVKVDKNGLLF  412 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~--------~~e~i~~~~~G~~~  412 (473)
                      .+|.+.++   .+++.+++..||+.|.    ..|   +.++.|++++|+|.|..+...        ....+.....|...
T Consensus        55 ~~v~~~~~---~~~m~~~m~~aDlvIs----~aG---~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~  124 (167)
T PF04101_consen   55 PNVKVFGF---VDNMAELMAAADLVIS----HAG---AGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML  124 (167)
T ss_dssp             CCCEEECS---SSSHHHHHHHHSEEEE----CS----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS
T ss_pred             CcEEEEec---hhhHHHHHHHcCEEEe----CCC---ccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc
Confidence            58999988   6789999999999886    333   358999999999999886554        33334444455555


Q ss_pred             C----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 011979          413 S----SSSELADQLLMLFKGFPDDSDVLKKLRNGT  443 (473)
Q Consensus       413 ~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~  443 (473)
                      .    +.+.|.++|..++++    +.....+.+.+
T Consensus       125 ~~~~~~~~~L~~~i~~l~~~----~~~~~~~~~~~  155 (167)
T PF04101_consen  125 DESELNPEELAEAIEELLSD----PEKLKEMAKAA  155 (167)
T ss_dssp             ECCC-SCCCHHHHHHCHCCC----HH-SHHHCCCH
T ss_pred             CcccCCHHHHHHHHHHHHcC----cHHHHHHHHHH
Confidence            3    367899999998885    55555554443

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.

>PLN00414 glycosyltransferase family protein

Probab=97.22  E-value=0.41  Score=51.01  Aligned_cols=103  Identities=12%  Similarity=0.207  Sum_probs=66.3

Q ss_pred             HHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----Cccccce-e
Q 011979          330 SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELV-K  404 (473)
Q Consensus       330 ~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i-~  404 (473)
                      .+++.++..|   ..+. .|+|+.+   +|....+..+.   +++.  -++++||+++|+|+|+...    ......+ .
T Consensus       304 ~f~~r~~~~g---~vv~-~w~PQ~~---vL~h~~v~~fv---tH~G--~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~  371 (446)
T PLN00414        304 GFEERVKGRG---IVWE-GWVEQPL---ILSHPSVGCFV---NHCG--FGSMWESLVSDCQIVFIPQLADQVLITRLLTE  371 (446)
T ss_pred             hHHHHhcCCC---eEEe-ccCCHHH---HhcCCccceEE---ecCc--hhHHHHHHHcCCCEEecCcccchHHHHHHHHH
Confidence            4555544333   3333 5788876   56666554441   2211  2499999999999999863    2344444 3


Q ss_pred             cCCceEEeC-------CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          405 VDKNGLLFS-------SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       405 ~~~~G~~~~-------~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      .-+.|+...       +.+++++++.+++.+   +.+..+++++++++..
T Consensus       372 ~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~---~~e~g~~~r~~a~~~~  418 (446)
T PLN00414        372 ELEVSVKVQREDSGWFSKESLRDTVKSVMDK---DSEIGNLVKRNHKKLK  418 (446)
T ss_pred             HhCeEEEeccccCCccCHHHHHHHHHHHhcC---ChhhHHHHHHHHHHHH
Confidence            456776662       588999999999975   3456677788877765

>PLN03007 UDP-glucosyltransferase family protein

Probab=97.18  E-value=0.48  Score=51.01  Aligned_cols=92  Identities=18%  Similarity=0.248  Sum_probs=55.9

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----Ccccccee-cCCceEEe---
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVK-VDKNGLLF---  412 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i~-~~~~G~~~---  412 (473)
                      .++.+.+ |+|+.   .+|..+++..+.   +++-  -++++||+++|+|+|+...    ......+. .-+.|+-.   
T Consensus       345 ~g~~v~~-w~PQ~---~iL~h~~v~~fv---tH~G--~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~  415 (482)
T PLN03007        345 KGLIIRG-WAPQV---LILDHQATGGFV---THCG--WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAK  415 (482)
T ss_pred             CCEEEec-CCCHH---HHhccCccceee---ecCc--chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccc
Confidence            4677764 69885   577788775552   2221  2489999999999999863    22222221 11223221   


Q ss_pred             -------C--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 011979          413 -------S--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM  446 (473)
Q Consensus       413 -------~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~  446 (473)
                             +  +.+++++++.+++.+    + +.+++++++++.
T Consensus       416 ~~~~~~~~~~~~~~l~~av~~~m~~----~-~~~~~r~~a~~~  453 (482)
T PLN03007        416 KLVKVKGDFISREKVEKAVREVIVG----E-EAEERRLRAKKL  453 (482)
T ss_pred             cccccccCcccHHHHHHHHHHHhcC----c-HHHHHHHHHHHH
Confidence                   1  588999999999985    2 234455555443

>PLN02534 UDP-glycosyltransferase

Probab=97.07  E-value=0.62  Score=50.26  Aligned_cols=117  Identities=16%  Similarity=0.235  Sum_probs=65.9

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc----ccc-ceecCCceEEe---
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEE-LVKVDKNGLLF---  412 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~----~~e-~i~~~~~G~~~---  412 (473)
                      .++.+. .|+|+.+   ++...++..+.   +++-  .++++||+++|+|+|+....+    ... +++.-+.|+-+   
T Consensus       344 ~g~~v~-~w~pq~~---iL~h~~v~~fv---tH~G--~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~  414 (491)
T PLN02534        344 RGLLIK-GWAPQVL---ILSHPAIGGFL---THCG--WNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVE  414 (491)
T ss_pred             CCeecc-CCCCHHH---HhcCCccceEE---ecCc--cHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEeccc
Confidence            355555 4788854   67777775552   2221  348999999999999986321    111 12222233321   


Q ss_pred             --------------CCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccc--cchH---HHHHHHHHHHHHHHhhc
Q 011979          413 --------------SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS--ARWA---TEWEEHAKPLITEVISQ  470 (473)
Q Consensus       413 --------------~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~w~---~~~~~~~~~~~~~~~~~  470 (473)
                                    -+.+++++++.+++.+   +.++-++|++++.+..+.  .++.   .+++ .+..+++++.+|
T Consensus       415 ~~~~~~~~~~~~~~v~~eev~~~v~~~m~~---~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~-nl~~fv~~i~~~  487 (491)
T PLN02534        415 VPVRWGDEERVGVLVKKDEVEKAVKTLMDD---GGEEGERRRRRAQELGVMARKAMELGGSSHI-NLSILIQDVLKQ  487 (491)
T ss_pred             ccccccccccccCccCHHHHHHHHHHHhcc---ccccHHHHHHHHHHHHHHHHHHhcCCCcHHH-HHHHHHHHHHHH
Confidence                          2478999999999862   123345666666654411  1111   1222 256666666554

>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative

Probab=97.00  E-value=0.27  Score=50.19  Aligned_cols=70  Identities=16%  Similarity=0.133  Sum_probs=47.5

Q ss_pred             CEEEEEEcCCCC-h-HHHHHHHHHcCCCc-EEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEE
Q 011979          316 RLLFIITGKGPD-K-ESYEEKIRRLRLKR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC  392 (473)
Q Consensus       316 ~~~l~ivG~g~~-~-~~l~~~~~~~~l~~-V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI  392 (473)
                      +..++++|...+ . +..++..+..+-.+ +.+.|. .+-.++..+++.||++|.   ..+|     .+==|.|+|+|+|
T Consensus       213 ~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~-~sL~el~ali~~a~l~Vs---~DSG-----p~HlAaA~g~p~v  283 (344)
T TIGR02201       213 GYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGK-LTLPQLAALIDHARLFIG---VDSV-----PMHMAAALGTPLV  283 (344)
T ss_pred             CCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCC-CCHHHHHHHHHhCCEEEe---cCCH-----HHHHHHHcCCCEE
Confidence            467888885432 2 22344433333223 446676 788999999999999998   4555     3445788999999


Q ss_pred             Ee
Q 011979          393 AV  394 (473)
Q Consensus       393 ~~  394 (473)
                      +-
T Consensus       284 ~L  285 (344)
T TIGR02201       284 AL  285 (344)
T ss_pred             EE
Confidence            86

This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.

>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS)

Probab=96.97  E-value=0.071  Score=52.68  Aligned_cols=71  Identities=27%  Similarity=0.254  Sum_probs=51.8

Q ss_pred             CEEEEEEcCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe
Q 011979          316 RLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV  394 (473)
Q Consensus       316 ~~~l~ivG~g~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~  394 (473)
                      +++++++|...+.+..++..+..+. ..+.+.|. .+-.++..+++.||++|.   ..++     .+==|.|+|+|+|+-
T Consensus       153 ~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~-~~l~e~~~li~~~~l~I~---~Dsg-----~~HlA~a~~~p~i~l  223 (279)
T cd03789         153 GARVVLTGGPAERELAEEIAAALGGPRVVNLAGK-TSLRELAALLARADLVVT---NDSG-----PMHLAAALGTPTVAL  223 (279)
T ss_pred             CCEEEEEechhhHHHHHHHHHhcCCCccccCcCC-CCHHHHHHHHHhCCEEEe---eCCH-----HHHHHHHcCCCEEEE
Confidence            6888999976666666666655432 34556666 678999999999999998   4444     334457999999997


Q ss_pred             c
Q 011979          395 S  395 (473)
Q Consensus       395 ~  395 (473)
                      -
T Consensus       224 ~  224 (279)
T cd03789         224 F  224 (279)
T ss_pred             E
Confidence            4

Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule

Probab=96.80  E-value=0.0095  Score=63.98  Aligned_cols=96  Identities=19%  Similarity=0.308  Sum_probs=60.0

Q ss_pred             CCEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe
Q 011979          315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV  394 (473)
Q Consensus       315 ~~~~l~ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~  394 (473)
                      |. ++++.-.+.....+.        +|+.+. .|+|+.++   |....+-++   -+++.  -..+.||+.+|+|+|+.
T Consensus       306 ~~-~~iW~~~~~~~~~l~--------~n~~~~-~W~PQ~~l---L~hp~v~~f---itHgG--~~s~~Ea~~~gvP~l~~  367 (500)
T PF00201_consen  306 PQ-RFIWKYEGEPPENLP--------KNVLIV-KWLPQNDL---LAHPRVKLF---ITHGG--LNSTQEALYHGVPMLGI  367 (500)
T ss_dssp             TT-EEEEEETCSHGCHHH--------TTEEEE-SS--HHHH---HTSTTEEEE---EES----HHHHHHHHHCT--EEE-
T ss_pred             CC-ccccccccccccccc--------ceEEEe-ccccchhh---hhcccceee---eeccc--cchhhhhhhccCCccCC
Confidence            55 677766553222211        478666 58998655   666655544   23332  34999999999999998


Q ss_pred             cc----CccccceecCCceEEeC----CHHHHHHHHHHHHhC
Q 011979          395 SY----SCIEELVKVDKNGLLFS----SSSELADQLLMLFKG  428 (473)
Q Consensus       395 ~~----~~~~e~i~~~~~G~~~~----~~~~la~~i~~l~~~  428 (473)
                      +.    ......+.+.+.|...+    +.+++.++|.+++++
T Consensus       368 P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~vl~~  409 (500)
T PF00201_consen  368 PLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRAAIREVLEN  409 (500)
T ss_dssp             GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHHHHHHHHS
T ss_pred             CCcccCCccceEEEEEeeEEEEEecCCcHHHHHHHHHHHHhh
Confidence            63    34555566667787775    589999999999996

This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....

>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]

Probab=96.79  E-value=0.58  Score=45.85  Aligned_cols=111  Identities=13%  Similarity=0.086  Sum_probs=68.0

Q ss_pred             CCCCCeEEEEEeeccCCCCH--HHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHH
Q 011979          254 KPNRPALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY  331 (473)
Q Consensus       254 ~~~~~~~i~~~G~~~~~K~~--~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l  331 (473)
                      +.-++.+-+.+|.-.+.-.+  +...+..+.+.+                         ++......|++.-+-...+..
T Consensus       158 p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k-------------------------~l~~~g~~~lisfSRRTp~~~  212 (329)
T COG3660         158 PLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVK-------------------------ILENQGGSFLISFSRRTPDTV  212 (329)
T ss_pred             CCCCceEEEEecCCCCCCccCHHHHHHHHHHHHH-------------------------HHHhCCceEEEEeecCCcHHH
Confidence            33466688888877666554  333333333322                         112356778887766556677


Q ss_pred             HHHHHH-cCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec
Q 011979          332 EEKIRR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS  395 (473)
Q Consensus       332 ~~~~~~-~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~  395 (473)
                      +..++. +.- +-+.+-+.--...=+..++..||..+.   +.-..   +-+.||.+.|+||-+-.
T Consensus       213 ~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~---TaDSi---nM~sEAasTgkPv~~~~  272 (329)
T COG3660         213 KSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIIS---TADSI---NMCSEAASTGKPVFILE  272 (329)
T ss_pred             HHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEE---ecchh---hhhHHHhccCCCeEEEe
Confidence            777776 332 233333221245578899999999998   22221   25689999999998753

>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins

Probab=96.73  E-value=0.22  Score=50.46  Aligned_cols=76  Identities=18%  Similarity=0.127  Sum_probs=54.7

Q ss_pred             CEEEEEEcCCCChHHHHHHHHHcC--CCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEE
Q 011979          316 RLLFIITGKGPDKESYEEKIRRLR--LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA  393 (473)
Q Consensus       316 ~~~l~ivG~g~~~~~l~~~~~~~~--l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~  393 (473)
                      ...+.|+.+-....+.++.++++-  ...+.+... -+..=+..+|..||.+++   +.-   .-.-+.||.++|+||..
T Consensus       182 ~~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~-~~~nPy~~~La~ad~i~V---T~D---SvSMvsEA~~tG~pV~v  254 (311)
T PF06258_consen  182 GGSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDG-TGENPYLGFLAAADAIVV---TED---SVSMVSEAAATGKPVYV  254 (311)
T ss_pred             CCeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecC-CCCCcHHHHHHhCCEEEE---cCc---cHHHHHHHHHcCCCEEE
Confidence            378999997765566666666553  257755554 566679999999999998   221   12368999999999999


Q ss_pred             eccCc
Q 011979          394 VSYSC  398 (473)
Q Consensus       394 ~~~~~  398 (473)
                      -...+
T Consensus       255 ~~l~~  259 (311)
T PF06258_consen  255 LPLPG  259 (311)
T ss_pred             ecCCC
Confidence            76543

The function of this family is unknown.

>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional

Probab=96.73  E-value=0.21  Score=51.14  Aligned_cols=101  Identities=17%  Similarity=0.174  Sum_probs=66.2

Q ss_pred             CCCeEEEEEee-ccCCCCH--HHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHH
Q 011979          256 NRPALVVSSTS-WTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE  332 (473)
Q Consensus       256 ~~~~~i~~~G~-~~~~K~~--~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~  332 (473)
                      +++.+++..|. +.+.|.+  +-..+.++.+.+                             .++.++++|...+++..+
T Consensus       179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~-----------------------------~~~~vvl~Gg~~e~~~~~  229 (348)
T PRK10916        179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLID-----------------------------EGYQVVLFGSAKDHEAGN  229 (348)
T ss_pred             CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHH-----------------------------CCCeEEEEeCHHhHHHHH
Confidence            45656667665 3455554  345555555533                             357888898665555555


Q ss_pred             HHHHHcCC---Cc-EEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe
Q 011979          333 EKIRRLRL---KR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV  394 (473)
Q Consensus       333 ~~~~~~~l---~~-V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~  394 (473)
                      +..+..+-   .+ +.+.|. .+-.++..+++.||++|.   ..+|     .+==|.|.|+|+|+-
T Consensus       230 ~i~~~~~~~~~~~~~~l~g~-~sL~el~ali~~a~l~I~---nDTG-----p~HlAaA~g~P~val  286 (348)
T PRK10916        230 EILAALNTEQQAWCRNLAGE-TQLEQAVILIAACKAIVT---NDSG-----LMHVAAALNRPLVAL  286 (348)
T ss_pred             HHHHhcccccccceeeccCC-CCHHHHHHHHHhCCEEEe---cCCh-----HHHHHHHhCCCEEEE
Confidence            55554432   12 455666 788999999999999998   4555     334478899999985

>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]

Probab=96.70  E-value=0.1  Score=54.33  Aligned_cols=118  Identities=22%  Similarity=0.289  Sum_probs=79.0

Q ss_pred             HHHHHHHHcCC-----C--cEEEecCCCC------cccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc
Q 011979          330 SYEEKIRRLRL-----K--RVAFRTMWLS------AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY  396 (473)
Q Consensus       330 ~l~~~~~~~~l-----~--~V~~~g~~v~------~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~  396 (473)
                      -+...+++.++     +  +|.|.+.+++      .-|+.++.+.++++|+   ||+.|++|..-.|--.+|.|-|+|+.
T Consensus       456 piL~~iRr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVF---PSYYEPWGYTPAECTVMGiPSvtTNl  532 (692)
T KOG3742|consen  456 PILSSIRRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVF---PSYYEPWGYTPAECTVMGIPSVTTNL  532 (692)
T ss_pred             hHHHHhHhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhcccccccc---ccccCCCCCCchheEEeccccccccc
Confidence            35566777666     2  3555554443      3488999999999999   79999999999999999999999986


Q ss_pred             Cc----cccceecCC-ceEEe-C--------CHHHHHHHHHHHHhCCCCCHHHHHHHHHH--HHHhccccchHHH
Q 011979          397 SC----IEELVKVDK-NGLLF-S--------SSSELADQLLMLFKGFPDDSDVLKKLRNG--TLEMGLSARWATE  455 (473)
Q Consensus       397 ~~----~~e~i~~~~-~G~~~-~--------~~~~la~~i~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~w~~~  455 (473)
                      +|    +.|.|.+.. -|+.. +        ++++|++.|...++     ...|+++.++  ..+.+.-..|..-
T Consensus       533 SGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F~~-----qsRRQRIiqRNrtErLSdLLDWk~l  602 (692)
T KOG3742|consen  533 SGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEFCK-----QSRRQRIIQRNRTERLSDLLDWKYL  602 (692)
T ss_pred             cchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHHHH-----HHHHHHHHHhcchhhHHHHHhHHHH
Confidence            54    456665443 46554 2        25666666666665     3445554333  3333334566543

>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=96.70  E-value=0.24  Score=50.55  Aligned_cols=100  Identities=23%  Similarity=0.242  Sum_probs=71.4

Q ss_pred             CCeEEEEEe-eccCCCCHH--HHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHH
Q 011979          257 RPALVVSST-SWTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE  333 (473)
Q Consensus       257 ~~~~i~~~G-~~~~~K~~~--~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~  333 (473)
                      +|.+++..| +-...|.+.  ...+.++.+.+                             ...+++++|+..+.+..++
T Consensus       175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~-----------------------------~~~~Vvl~g~~~e~e~~~~  225 (334)
T COG0859         175 RPYIVINPGASRGSAKRWPLEHYAELAELLIA-----------------------------KGYQVVLFGGPDEEERAEE  225 (334)
T ss_pred             CCeEEEeccccccccCCCCHHHHHHHHHHHHH-----------------------------CCCEEEEecChHHHHHHHH
Confidence            566888888 666777654  55555555555                             2388999998765566666


Q ss_pred             HHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec
Q 011979          334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS  395 (473)
Q Consensus       334 ~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~  395 (473)
                      ..+.++- .+.+.|. .+-.++..++..||++|.   ..++     .+==|.|.|+|+|+--
T Consensus       226 i~~~~~~-~~~l~~k-~sL~e~~~li~~a~l~I~---~DSg-----~~HlAaA~~~P~I~iy  277 (334)
T COG0859         226 IAKGLPN-AVILAGK-TSLEELAALIAGADLVIG---NDSG-----PMHLAAALGTPTIALY  277 (334)
T ss_pred             HHHhcCC-ccccCCC-CCHHHHHHHHhcCCEEEc---cCCh-----HHHHHHHcCCCEEEEE
Confidence            6666652 2227777 889999999999999997   4555     3445789999999974

>PLN02670 transferase, transferring glycosyl groups

Probab=96.66  E-value=0.032  Score=59.79  Aligned_cols=108  Identities=17%  Similarity=0.161  Sum_probs=68.1

Q ss_pred             EEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----CccccceecCCceEEeC-----
Q 011979          343 VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVDKNGLLFS-----  413 (473)
Q Consensus       343 V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i~~~~~G~~~~-----  413 (473)
                      +.+. .|+|+.+   +|....+..+.   +++.  -++++||+++|+|+|+...    ......+...+.|+..+     
T Consensus       341 ~vv~-~W~PQ~~---IL~H~~v~~Fv---tHcG--wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~  411 (472)
T PLN02670        341 MIHV-GWVPQVK---ILSHESVGGFL---THCG--WNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD  411 (472)
T ss_pred             eEEe-CcCCHHH---HhcCcccceee---ecCC--cchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC
Confidence            4444 5799876   56677775552   2221  2489999999999999852    33444555567787662     


Q ss_pred             ---CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Q 011979          414 ---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI  464 (473)
Q Consensus       414 ---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~  464 (473)
                         +.+++.+++.+++.+    + .-+++++++++..+.+.=...-++.+..++
T Consensus       412 ~~~~~e~i~~av~~vm~~----~-~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~  460 (472)
T PLN02670        412 GSFTSDSVAESVRLAMVD----D-AGEEIRDKAKEMRNLFGDMDRNNRYVDELV  460 (472)
T ss_pred             CcCcHHHHHHHHHHHhcC----c-chHHHHHHHHHHHHHHhCcchhHHHHHHHH
Confidence               478999999999975    2 234566666665544443333344443333

>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=96.61  E-value=0.29  Score=48.45  Aligned_cols=65  Identities=15%  Similarity=0.366  Sum_probs=46.4

Q ss_pred             CEEEEEEcCC-CChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe
Q 011979          316 RLLFIITGKG-PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV  394 (473)
Q Consensus       316 ~~~l~ivG~g-~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~  394 (473)
                      ++.++ +|.+ |....+.+.++.+.  ++.++   ...++++.++++||+.+.    +.    |+.+.|+...|+|.++-
T Consensus       187 nl~iV-~gs~~p~l~~l~k~~~~~~--~i~~~---~~~~dma~LMke~d~aI~----Aa----GstlyEa~~lgvP~l~l  252 (318)
T COG3980         187 NLHIV-VGSSNPTLKNLRKRAEKYP--NINLY---IDTNDMAELMKEADLAIS----AA----GSTLYEALLLGVPSLVL  252 (318)
T ss_pred             eEEEE-ecCCCcchhHHHHHHhhCC--CeeeE---ecchhHHHHHHhcchhee----cc----chHHHHHHHhcCCceEE
Confidence            44443 3433 55566666666654  88887   448999999999999996    32    45899999999994443

>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB

Probab=96.57  E-value=0.95  Score=45.18  Aligned_cols=178  Identities=21%  Similarity=0.168  Sum_probs=99.5

Q ss_pred             HhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCceEEeeCCCCCCccc
Q 011979          123 SSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHP  202 (473)
Q Consensus       123 ~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g~~~~vi~n~~~~~f~~  202 (473)
                      ++..+.|+++.-.+.+.      +  .++   ..+++-+...+.+|.+.+=-+...+++++ .|+++.+.++..- .+.+
T Consensus        95 a~~~~k~~~~~g~giGP------~--~~~---~~r~~~~~~l~~~~~i~vRD~~S~~~l~~-~g~~i~~~~D~a~-~l~~  161 (298)
T TIGR03609        95 ARLFGKPVILWGQGIGP------L--RRR---LSRWLVRRVLRGCRAISVRDAASYRLLKR-LGIPAELAADPVW-LLPP  161 (298)
T ss_pred             HHHcCCCEEEEecccCC------c--CCH---HHHHHHHHHHccCCEEEEeCHHHHHHHHH-hCCCceEeCChhh-hCCC
Confidence            44567888876666631      1  111   23355566678899988888888877765 6876555443211 0101


Q ss_pred             CChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccC--CCCHHHHHHHH
Q 011979          203 TSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTP--DEDFGILLEAA  280 (473)
Q Consensus       203 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~--~K~~~~li~a~  280 (473)
                      .....                                            ....+++.+.+.+..+..  ....+.+.+++
T Consensus       162 ~~~~~--------------------------------------------~~~~~~~~i~i~~r~~~~~~~~~~~~l~~~l  197 (298)
T TIGR03609       162 EPWPG--------------------------------------------GEPLPEPVIVVSLRPWPLLDVSRLLRLLRAL  197 (298)
T ss_pred             Ccccc--------------------------------------------cccCCCCeEEEEECCCCcCCHHHHHHHHHHH
Confidence            00000                                            011123434444433321  12345666666


Q ss_pred             HHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcC--CCChHHHHHHHHHcCC-CcEEEecCCCCcccHHH
Q 011979          281 LMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK--GPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPL  357 (473)
Q Consensus       281 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~--g~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~  357 (473)
                      ..+.++                            .+.+++++.-  ..+.+..++..+.+.- ..|  +.. .+.+++..
T Consensus       198 ~~l~~~----------------------------~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i--~~~-~~~~e~~~  246 (298)
T TIGR03609       198 DRLQRD----------------------------TGAFVLFLPFQQPQDLPLARALRDQLLGPAEV--LSP-LDPEELLG  246 (298)
T ss_pred             HHHHHh----------------------------hCCeEEEEeCCcchhHHHHHHHHHhcCCCcEE--Eec-CCHHHHHH
Confidence            666552                            2455555443  2344444444444432 233  333 67889999


Q ss_pred             HHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc
Q 011979          358 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY  396 (473)
Q Consensus       358 ~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~  396 (473)
                      +++++|++|.    ++.+    .++=|+.+|+|+++..+
T Consensus       247 ~i~~~~~vI~----~RlH----~~I~A~~~gvP~i~i~y  277 (298)
T TIGR03609       247 LFASARLVIG----MRLH----ALILAAAAGVPFVALSY  277 (298)
T ss_pred             HHhhCCEEEE----echH----HHHHHHHcCCCEEEeec
Confidence            9999999986    4333    67889999999998753

The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).

>PLN02764 glycosyltransferase family protein

Probab=95.99  E-value=0.11  Score=55.27  Aligned_cols=89  Identities=15%  Similarity=0.120  Sum_probs=59.1

Q ss_pred             CCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----Cccccce-ecCCceEEe------C-CH
Q 011979          348 MWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELV-KVDKNGLLF------S-SS  415 (473)
Q Consensus       348 ~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i-~~~~~G~~~------~-~~  415 (473)
                      .|+|+.+   ++....+..+.   +++.  .++++||+++|+|+|+...    ......+ +.-+.|+-.      . +.
T Consensus       323 ~W~PQ~~---vL~h~~v~~Fv---tH~G--~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~  394 (453)
T PLN02764        323 GWVQQPL---ILSHPSVGCFV---SHCG--FGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSK  394 (453)
T ss_pred             CCCCHHH---HhcCcccCeEE---ecCC--chHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCH
Confidence            5799877   45666554442   2221  2399999999999999863    2333444 334566653      1 57


Q ss_pred             HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          416 SELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       416 ~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      +++.+++.+++++   ..+..+++++++++..
T Consensus       395 e~i~~av~~vm~~---~~~~g~~~r~~a~~~~  423 (453)
T PLN02764        395 ESLRDAINSVMKR---DSEIGNLVKKNHTKWR  423 (453)
T ss_pred             HHHHHHHHHHhcC---CchhHHHHHHHHHHHH
Confidence            8999999999975   2255667777777654

>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]

Probab=95.92  E-value=0.1  Score=58.14  Aligned_cols=133  Identities=17%  Similarity=0.111  Sum_probs=98.9

Q ss_pred             CCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCC-CCh-----
Q 011979          255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDK-----  328 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g-~~~-----  328 (473)
                      |+.. .++++=|+.+.|...+.+.-+..+.+.+    +++                  ..|.+.+++.|+- |.-     
T Consensus       485 p~~l-fd~~~kRiheYKRq~Lnl~~i~~ly~~i----~~d------------------~~prv~~iFaGKAhP~y~~aK~  541 (750)
T COG0058         485 PNAL-FDGQARRIHEYKRQLLNLLDIERLYRIL----KED------------------WVPRVQIIFAGKAHPADYAAKE  541 (750)
T ss_pred             CCcc-eeeeehhhhhhhhhHHhHhhHHHHHHHH----hcC------------------CCCceEEEEeccCCCcchHHHH
Confidence            4443 8889999999999888877766665532    111                  2477888888874 221     


Q ss_pred             --HHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCC--CCCCCcHHHHHHHhcCCcEEEeccCccccce
Q 011979          329 --ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS--SGLDLPMKVVDMFGCGLPVCAVSYSCIEELV  403 (473)
Q Consensus       329 --~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s--~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i  403 (473)
                        ..+.+.++..+. .+|.|+.. .+..-...++..||+-..   .|  ..|..|+.-|=+|..|.+-|+|-.|..-|+.
T Consensus       542 iIk~I~~~a~~in~~lkVvFl~n-YdvslA~~iipa~Dvweq---is~a~~EASGTsnMK~alNGaltigtlDGanvEi~  617 (750)
T COG0058         542 IIKLINDVADVINNKLKVVFLPN-YDVSLAELLIPAADVWEQ---IPTAGKEASGTSNMKAALNGALTLGTLDGANVEIY  617 (750)
T ss_pred             HHHHHHHHHHhhcccceEEEeCC-CChhHHHhhccccccccc---CCCCCccccCcCcchHHhcCCceeeccccHHHHHH
Confidence              223334444444 47888876 777788889999999998   34  5588888999999999999999988888888


Q ss_pred             e--cCCceEEeCC
Q 011979          404 K--VDKNGLLFSS  414 (473)
Q Consensus       404 ~--~~~~G~~~~~  414 (473)
                      +  .+.|||++.+
T Consensus       618 e~vg~~N~~~fG~  630 (750)
T COG0058         618 EHVGGENGWIFGE  630 (750)
T ss_pred             HhcCCCceEEeCC
Confidence            6  7899999974

>PLN03004 UDP-glycosyltransferase

Probab=95.88  E-value=0.095  Score=55.89  Aligned_cols=79  Identities=14%  Similarity=0.202  Sum_probs=56.0

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec----cCcccccee-cCCceEEeC--
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIEELVK-VDKNGLLFS--  413 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~----~~~~~e~i~-~~~~G~~~~--  413 (473)
                      .++.+. .|+|+.+   +|..+++..+.   +++.  -++++||+++|+|+|+..    .......+. +-+.|+..+  
T Consensus       334 ~g~~v~-~W~PQ~~---iL~H~~v~~Fv---TH~G--~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~  404 (451)
T PLN03004        334 KGMVVK-SWAPQVP---VLNHKAVGGFV---THCG--WNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNES  404 (451)
T ss_pred             CcEEEE-eeCCHHH---HhCCCccceEe---ccCc--chHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCC
Confidence            466666 4799877   67888886552   3221  248999999999999985    333444453 346776662  


Q ss_pred             -----CHHHHHHHHHHHHhC
Q 011979          414 -----SSSELADQLLMLFKG  428 (473)
Q Consensus       414 -----~~~~la~~i~~l~~~  428 (473)
                           +.+++++++.+++.+
T Consensus       405 ~~~~~~~e~l~~av~~vm~~  424 (451)
T PLN03004        405 ETGFVSSTEVEKRVQEIIGE  424 (451)
T ss_pred             cCCccCHHHHHHHHHHHhcC
Confidence                 578999999999974

>PLN00164 glucosyltransferase; Provisional

Probab=95.84  E-value=0.13  Score=55.26  Aligned_cols=93  Identities=16%  Similarity=0.235  Sum_probs=59.4

Q ss_pred             EEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----Cccccce-ecCCceEEeC----
Q 011979          343 VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELV-KVDKNGLLFS----  413 (473)
Q Consensus       343 V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i-~~~~~G~~~~----  413 (473)
                      +.+. .|+|+.+   +|...++..+.+-...     ++++||+++|+|+|+...    ......+ ..-+.|+...    
T Consensus       341 ~~v~-~w~PQ~~---iL~h~~vg~fvtH~Gw-----nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~  411 (480)
T PLN00164        341 LVWP-TWAPQKE---ILAHAAVGGFVTHCGW-----NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRK  411 (480)
T ss_pred             eEEe-ecCCHHH---HhcCcccCeEEeeccc-----chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccc
Confidence            4443 4688765   5677776555211222     389999999999999852    3333333 3456776652    


Q ss_pred             -----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          414 -----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       414 -----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                           +.++++++|.+++.+   ..++.+++++++.+..
T Consensus       412 ~~~~~~~e~l~~av~~vm~~---~~~~~~~~r~~a~~~~  447 (480)
T PLN00164        412 RDNFVEAAELERAVRSLMGG---GEEEGRKAREKAAEMK  447 (480)
T ss_pred             cCCcCcHHHHHHHHHHHhcC---CchhHHHHHHHHHHHH
Confidence                 478999999999975   1223556666666654

>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria

Probab=95.84  E-value=0.21  Score=46.12  Aligned_cols=155  Identities=12%  Similarity=0.021  Sum_probs=82.8

Q ss_pred             CCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhCCCCEEEEeCCC
Q 011979           32 MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPP  111 (473)
Q Consensus        32 ~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~  111 (473)
                      .||+|..+|.......     .+||+..++..............+.+-............+..|..+-..||+|+.|..+
T Consensus         2 ~gh~v~fl~~~~~~~~-----~~GV~~~~y~~~~~~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H~GW   76 (171)
T PF12000_consen    2 RGHEVVFLTERKRPPI-----PPGVRVVRYRPPRGPTPGTHPYVRDFEAAVLRGQAVARAARQLRAQGFVPDVIIAHPGW   76 (171)
T ss_pred             CCCEEEEEecCCCCCC-----CCCcEEEEeCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEcCCc
Confidence            4999999995443322     16999988873222222222222222222222222333444555554679999999865


Q ss_pred             chhHHHHHHHHHh-hCCCeEEEEecCchhhhhhhh--cC---CCchHH----HHHHHHHHHHhhcCCEEEEcCHHHHHHH
Q 011979          112 SVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLS--LG---RRSHFV----SIYRWIEKYYGKMANGCLCVTQAMQHEL  181 (473)
Q Consensus       112 ~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~~--~~---~~~~~~----~~~~~~e~~~~~~ad~vi~vS~~~~~~l  181 (473)
                      .-..     .++- ..++|++... ++.|......  +.   +...-.    +......-.....||..++.|...++.+
T Consensus        77 Ge~L-----flkdv~P~a~li~Y~-E~~y~~~g~d~~FDpe~p~~~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~f  150 (171)
T PF12000_consen   77 GETL-----FLKDVFPDAPLIGYF-EFYYRASGADVGFDPEFPPSLDDRARLRMRNAHNLLALEQADAGISPTRWQRSQF  150 (171)
T ss_pred             chhh-----hHHHhCCCCcEEEEE-EEEecCCCCcCCCCCCCCCCHHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHhC
Confidence            4322     2233 3578876521 1111111000  00   111111    1122223333447999999999999888


Q ss_pred             HHHhCCceEEeeCCCC
Q 011979          182 AQNWGIKATVLYDQPP  197 (473)
Q Consensus       182 ~~~~g~~~~vi~n~~~  197 (473)
                      -..+..++.||++|.+
T Consensus       151 P~~~r~kI~VihdGiD  166 (171)
T PF12000_consen  151 PAEFRSKISVIHDGID  166 (171)
T ss_pred             CHHHHcCcEEeecccc
Confidence            7777888999999954

This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.

>PLN02210 UDP-glucosyl transferase

Probab=95.76  E-value=0.19  Score=53.75  Aligned_cols=78  Identities=14%  Similarity=0.193  Sum_probs=53.0

Q ss_pred             cEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----Cccccceec-CCceEEeC---
Q 011979          342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKV-DKNGLLFS---  413 (473)
Q Consensus       342 ~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i~~-~~~G~~~~---  413 (473)
                      +..+. .|+|+.+   +|..+++..+..-...+     +++|++++|+|+|+-..    ......+.+ -+.|+...   
T Consensus       325 ~g~v~-~w~PQ~~---iL~h~~vg~FitH~G~n-----S~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~  395 (456)
T PLN02210        325 QGVVL-EWSPQEK---ILSHMAISCFVTHCGWN-----STIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDA  395 (456)
T ss_pred             CeEEE-ecCCHHH---HhcCcCcCeEEeeCCcc-----cHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccc
Confidence            44445 5799875   77788755552112233     88999999999999863    233444444 56776652   


Q ss_pred             -----CHHHHHHHHHHHHhC
Q 011979          414 -----SSSELADQLLMLFKG  428 (473)
Q Consensus       414 -----~~~~la~~i~~l~~~  428 (473)
                           +.+++++++.+++.+
T Consensus       396 ~~~~~~~~~l~~av~~~m~~  415 (456)
T PLN02210        396 VDGELKVEEVERCIEAVTEG  415 (456)
T ss_pred             cCCcCCHHHHHHHHHHHhcC
Confidence                 578999999999974

>PLN02555 limonoid glucosyltransferase

Probab=95.65  E-value=0.19  Score=54.07  Aligned_cols=93  Identities=16%  Similarity=0.240  Sum_probs=59.2

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----CccccceecC-CceEEe---
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVD-KNGLLF---  412 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i~~~-~~G~~~---  412 (473)
                      +|+.+. .|+|+.+   +|....+..+.   +++.  -++++||+.+|+|+|+...    ......+.+. +.|+..   
T Consensus       337 ~~g~v~-~W~PQ~~---iL~H~~v~~Fv---tH~G--~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~  407 (480)
T PLN02555        337 DKGKIV-QWCPQEK---VLAHPSVACFV---THCG--WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRG  407 (480)
T ss_pred             CceEEE-ecCCHHH---HhCCCccCeEE---ecCC--cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCC
Confidence            467666 4798866   45444443331   2221  2389999999999999863    2333434333 667665   


Q ss_pred             ---C---CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          413 ---S---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       413 ---~---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                         .   +.+++++++.+++.+     ++.++|++++++..
T Consensus       408 ~~~~~~v~~~~v~~~v~~vm~~-----~~g~~~r~ra~~l~  443 (480)
T PLN02555        408 EAENKLITREEVAECLLEATVG-----EKAAELKQNALKWK  443 (480)
T ss_pred             ccccCcCcHHHHHHHHHHHhcC-----chHHHHHHHHHHHH
Confidence               1   478999999999974     23456777776654

>PLN03015 UDP-glucosyl transferase

Probab=95.16  E-value=5.6  Score=42.71  Aligned_cols=93  Identities=17%  Similarity=0.185  Sum_probs=57.1

Q ss_pred             EEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----Cccccce-ecCCceEEeC----
Q 011979          343 VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELV-KVDKNGLLFS----  413 (473)
Q Consensus       343 V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i-~~~~~G~~~~----  413 (473)
                      +.+. .|+|+.++   +....+..+.   +++.  -++++||+++|+|+|+...    ......+ ..-+.|+-..    
T Consensus       337 l~v~-~W~PQ~~v---L~h~~vg~fv---tH~G--wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~  407 (470)
T PLN03015        337 LVVT-QWAPQVEI---LSHRSIGGFL---SHCG--WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPS  407 (470)
T ss_pred             eEEE-ecCCHHHH---hccCccCeEE---ecCC--chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccccc
Confidence            3343 57998875   4456665552   2211  2389999999999999863    2222323 3445565551    


Q ss_pred             ----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          414 ----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       414 ----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                          +.+++++++..++..   ..++-++|++++.+..
T Consensus       408 ~~~v~~e~i~~~v~~lm~~---~~eeg~~~R~ra~~lk  442 (470)
T PLN03015        408 EKVIGREEVASLVRKIVAE---EDEEGQKIRAKAEEVR  442 (470)
T ss_pred             CCccCHHHHHHHHHHHHcc---CcccHHHHHHHHHHHH
Confidence                478999999999962   1133456666666644

>PLN02554 UDP-glycosyltransferase family protein

Probab=95.00  E-value=0.38  Score=51.75  Aligned_cols=78  Identities=13%  Similarity=0.151  Sum_probs=50.8

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----Cccc-cceecCCceEEeC--
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIE-ELVKVDKNGLLFS--  413 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~-e~i~~~~~G~~~~--  413 (473)
                      +|+.+. .|+|+.+   +|+...+..+.   +++.  -++++||+.+|+|+|+...    .... ..+..-+.|+..+  
T Consensus       342 ~~g~v~-~W~PQ~~---iL~H~~v~~Fv---tH~G--~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~  412 (481)
T PLN02554        342 DIGKVI-GWAPQVA---VLAKPAIGGFV---THCG--WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKY  412 (481)
T ss_pred             cCceEE-eeCCHHH---HhCCcccCccc---ccCc--cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecc
Confidence            466666 5899866   55455554441   2221  2389999999999999863    2233 3344445665541  


Q ss_pred             -------------CHHHHHHHHHHHHh
Q 011979          414 -------------SSSELADQLLMLFK  427 (473)
Q Consensus       414 -------------~~~~la~~i~~l~~  427 (473)
                                   +.++++++|.+++.
T Consensus       413 ~~~~~~~~~~~~~~~e~l~~av~~vm~  439 (481)
T PLN02554        413 WRGDLLAGEMETVTAEEIERGIRCLME  439 (481)
T ss_pred             ccccccccccCeEcHHHHHHHHHHHhc
Confidence                         57899999999996

>PLN02167 UDP-glycosyltransferase family protein

Probab=94.98  E-value=0.45  Score=51.14  Aligned_cols=78  Identities=17%  Similarity=0.236  Sum_probs=50.4

Q ss_pred             cEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----Ccccc-ceecCCceEEeC---
Q 011979          342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEE-LVKVDKNGLLFS---  413 (473)
Q Consensus       342 ~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e-~i~~~~~G~~~~---  413 (473)
                      +..+. .|+|+.+   +|....+..+.+-...+     +++||+++|+|+|+...    ..... ++..-+.|+...   
T Consensus       341 rg~v~-~w~PQ~~---iL~h~~vg~fvtH~G~n-----S~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~  411 (475)
T PLN02167        341 RGLVC-GWAPQVE---ILAHKAIGGFVSHCGWN-----SVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDY  411 (475)
T ss_pred             Ceeee-ccCCHHH---HhcCcccCeEEeeCCcc-----cHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccc
Confidence            34455 5788866   56665554442112233     88999999999999863    22332 244456676541   


Q ss_pred             --------CHHHHHHHHHHHHhC
Q 011979          414 --------SSSELADQLLMLFKG  428 (473)
Q Consensus       414 --------~~~~la~~i~~l~~~  428 (473)
                              +.+++++++.+++.+
T Consensus       412 ~~~~~~~~~~~~l~~av~~~m~~  434 (475)
T PLN02167        412 VSAYGEIVKADEIAGAVRSLMDG  434 (475)
T ss_pred             ccccCCcccHHHHHHHHHHHhcC
Confidence                    478999999999975

>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=94.84  E-value=0.084  Score=43.88  Aligned_cols=82  Identities=13%  Similarity=0.114  Sum_probs=57.5

Q ss_pred             EEEEcC-CCChHHHHHHHHHcCCCcEEE--ecCCCCccc--HHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEE
Q 011979          319 FIITGK-GPDKESYEEKIRRLRLKRVAF--RTMWLSAED--YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA  393 (473)
Q Consensus       319 l~ivG~-g~~~~~l~~~~~~~~l~~V~~--~g~~v~~~~--i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~  393 (473)
                      ++|+|+ ......+++.++++|.+-+.+  -+. .....  ++..+..||+.|++...-+....-..--+|-..|+|++.
T Consensus         2 vliVGG~~~~~~~~~~~~~~~G~~~~~hg~~~~-~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~   80 (97)
T PF10087_consen    2 VLIVGGREDRERRYKRILEKYGGKLIHHGRDGG-DEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY   80 (97)
T ss_pred             EEEEcCCcccHHHHHHHHHHcCCEEEEEecCCC-CccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence            577885 356788999999999866666  233 33444  999999999999963332333344455667788999999


Q ss_pred             eccCcccc
Q 011979          394 VSYSCIEE  401 (473)
Q Consensus       394 ~~~~~~~e  401 (473)
                      +...+...
T Consensus        81 ~~~~~~~~   88 (97)
T PF10087_consen   81 SRSRGVSS   88 (97)
T ss_pred             ECCCCHHH
Confidence            98655443

>PRK14986 glycogen phosphorylase; Provisional

Probab=94.49  E-value=0.3  Score=55.19  Aligned_cols=144  Identities=15%  Similarity=0.119  Sum_probs=99.3

Q ss_pred             cCCCCCeEEEEEeeccCCCCHHH-HHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCC-CCh--
Q 011979          253 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDK--  328 (473)
Q Consensus       253 ~~~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g-~~~--  328 (473)
                      +.|+.- ..+++=|+.+.|...+ ++..+..+.+-                    .+.+........+++.|+- |.-  
T Consensus       539 ldp~sL-fd~qakR~heYKRq~LNil~~i~ry~~i--------------------~~~p~~~~~P~~~IFaGKAaP~y~~  597 (815)
T PRK14986        539 VNPKAL-FDVQIKRIHEYKRQLMNVLHVITRYNRI--------------------KADPDAKWVPRVNIFAGKAASAYYM  597 (815)
T ss_pred             cCcccc-eeeeehhhhhhhhhhHHHhhhHHHHHHH--------------------HhCCCcCCCCeEEEEeecCCCCcHH
Confidence            344433 7888999999999988 77777666541                    1111111234788888874 221  


Q ss_pred             -HHHHH----HHHH----cCC-C--cEEEecCCCCcccHHHHHhcCcEEEEeccCC--CCCCCcHHHHHHHhcCCcEEEe
Q 011979          329 -ESYEE----KIRR----LRL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS--SGLDLPMKVVDMFGCGLPVCAV  394 (473)
Q Consensus       329 -~~l~~----~~~~----~~l-~--~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s--~~e~~p~kv~Eama~G~PvI~~  394 (473)
                       ..+-+    .++.    -.+ +  +|.|+.- ...+-...++..||+-..   .|  ..|..|+.=+=+|..|.+.++|
T Consensus       598 aK~iIk~I~~va~~in~Dp~v~~~lkVVFlen-Y~vslAe~lipg~Dv~eq---is~ag~EASGTsnMK~alNGaLtlgt  673 (815)
T PRK14986        598 AKHIIHLINDVAKVINNDPQIGDKLKVVFIPN-YSVSLAQLIIPAADLSEQ---ISLAGTEASGTSNMKFALNGALTIGT  673 (815)
T ss_pred             HHHHHHHHHHHHHHhccChhhcCceeEEEeCC-CCHHHHHHhhhhhhhhhh---CCCCCccccCcchhhHHhcCceeeec
Confidence             22222    2221    112 2  6888876 677788889999999998   34  4578888889999999999999


Q ss_pred             ccCccccceec--CCceEEeC-CHHHHHHH
Q 011979          395 SYSCIEELVKV--DKNGLLFS-SSSELADQ  421 (473)
Q Consensus       395 ~~~~~~e~i~~--~~~G~~~~-~~~~la~~  421 (473)
                      -.|...|+.++  +.||+++. +.+++.+.
T Consensus       674 lDG~nvEi~e~vG~eN~~~fG~~~~ev~~~  703 (815)
T PRK14986        674 LDGANVEMLEHVGEENIFIFGNTAEEVEAL  703 (815)
T ss_pred             cCCchhHHHHhcCCCcEEEeCCCHHHHHHH
Confidence            98988888875  78999997 56555543

>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=94.36  E-value=1.1  Score=48.25  Aligned_cols=77  Identities=19%  Similarity=0.220  Sum_probs=49.0

Q ss_pred             cEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----Cccccce-ecCCceEEeC---
Q 011979          342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELV-KVDKNGLLFS---  413 (473)
Q Consensus       342 ~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i-~~~~~G~~~~---  413 (473)
                      ++.+.+ |+|+.+   +|....+.++.   +++-  .++++||+++|+|+|+...    ......+ +.-+.|+...   
T Consensus       344 g~~v~~-w~PQ~~---vL~h~~v~~fv---tH~G--~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~  414 (477)
T PLN02863        344 GLVIRG-WAPQVA---ILSHRAVGAFL---THCG--WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGA  414 (477)
T ss_pred             CEEecC-CCCHHH---HhcCCCcCeEE---ecCC--chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCC
Confidence            566654 688854   66665554442   2221  2389999999999999863    2333433 3346676551   


Q ss_pred             ----CHHHHHHHHHHHHh
Q 011979          414 ----SSSELADQLLMLFK  427 (473)
Q Consensus       414 ----~~~~la~~i~~l~~  427 (473)
                          +.+++++++.+++.
T Consensus       415 ~~~~~~~~v~~~v~~~m~  432 (477)
T PLN02863        415 DTVPDSDELARVFMESVS  432 (477)
T ss_pred             CCCcCHHHHHHHHHHHhh
Confidence                46789999988874

>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=94.02  E-value=0.15  Score=49.27  Aligned_cols=102  Identities=16%  Similarity=0.196  Sum_probs=59.2

Q ss_pred             CCCCeEEEEEeeccCCCCHHH--HHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC--hHH
Q 011979          255 PNRPALVVSSTSWTPDEDFGI--LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KES  330 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~~K~~~~--li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~--~~~  330 (473)
                      .+++.+++..|.-.+.|.+..  ..+.+..+.+                             ....++++|.+.+  .+.
T Consensus       103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~-----------------------------~~~~vvl~g~~~~~~~~~  153 (247)
T PF01075_consen  103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKE-----------------------------RGYRVVLLGGPEEQEKEI  153 (247)
T ss_dssp             TTSSEEEEE---SSGGGS--HHHHHHHHHHHCC-----------------------------CT-EEEE--SSHHHHHHH
T ss_pred             ccCCeEEEeecCCCccccCCHHHHHHHHHHHHh-----------------------------hCceEEEEccchHHHHHH
Confidence            346667777777667777543  4455555433                             2378889997654  122


Q ss_pred             HHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe
Q 011979          331 YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV  394 (473)
Q Consensus       331 l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~  394 (473)
                      .++..+...-..+.+.|. .+-.++..+++.||++|.   ..++     .+==|.|.|+|+|+-
T Consensus       154 ~~~~~~~~~~~~~~~~~~-~~l~e~~ali~~a~~~I~---~Dtg-----~~HlA~a~~~p~v~l  208 (247)
T PF01075_consen  154 ADQIAAGLQNPVINLAGK-TSLRELAALISRADLVIG---NDTG-----PMHLAAALGTPTVAL  208 (247)
T ss_dssp             HHHHHTTHTTTTEEETTT-S-HHHHHHHHHTSSEEEE---ESSH-----HHHHHHHTT--EEEE
T ss_pred             HHHHHHhcccceEeecCC-CCHHHHHHHHhcCCEEEe---cCCh-----HHHHHHHHhCCEEEE
Confidence            222223222236888887 889999999999999998   4444     445578899999997

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.

>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I

Probab=93.93  E-value=0.85  Score=45.88  Aligned_cols=99  Identities=16%  Similarity=0.107  Sum_probs=64.9

Q ss_pred             CCCeEEEEEeeccCCCCH--HHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh-HHHH
Q 011979          256 NRPALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYE  332 (473)
Q Consensus       256 ~~~~~i~~~G~~~~~K~~--~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-~~l~  332 (473)
                      +++.+++..|.=...|.+  +...+.++.+.+                             .+..++++|+++.+ +..+
T Consensus       178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~-----------------------------~~~~~vl~~g~~~e~~~~~  228 (319)
T TIGR02193       178 PAPYAVLLHATSRDDKTWPEERWRELARLLLA-----------------------------RGLQIVLPWGNDAEKQRAE  228 (319)
T ss_pred             CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHH-----------------------------CCCeEEEeCCCHHHHHHHH
Confidence            356577777654456655  455566666544                             25677887655543 3344


Q ss_pred             HHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe
Q 011979          333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV  394 (473)
Q Consensus       333 ~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~  394 (473)
                      +..+..  ++..+.|. .+-.++..+++.||++|.   ..++     .+==|.|+|+|+|+-
T Consensus       229 ~i~~~~--~~~~l~g~-~sL~el~ali~~a~l~I~---~DSg-----p~HlAaa~g~P~i~l  279 (319)
T TIGR02193       229 RIAEAL--PGAVVLPK-MSLAEVAALLAGADAVVG---VDTG-----LTHLAAALDKPTVTL  279 (319)
T ss_pred             HHHhhC--CCCeecCC-CCHHHHHHHHHcCCEEEe---CCCh-----HHHHHHHcCCCEEEE
Confidence            444433  34466777 889999999999999998   4555     333467889999986

This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases

Probab=93.88  E-value=0.47  Score=53.60  Aligned_cols=143  Identities=16%  Similarity=0.166  Sum_probs=98.9

Q ss_pred             cCCCCCeEEEEEeeccCCCCHHH-HHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCC-CCh--
Q 011979          253 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDK--  328 (473)
Q Consensus       253 ~~~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g-~~~--  328 (473)
                      +.|+.- ..+++=|+.+.|...+ ++..+..+.+                    +.+++........+++.|+- |.-  
T Consensus       526 ldp~sl-fdvq~KR~heYKRq~LNil~ii~~y~~--------------------i~~~p~~~~~P~~~IFaGKAaP~y~~  584 (797)
T cd04300         526 VDPDSL-FDVQVKRIHEYKRQLLNVLHIIHLYNR--------------------IKENPNADIVPRTFIFGGKAAPGYYM  584 (797)
T ss_pred             cCCCcc-EEEEeeechhhhhhhhHHHhhHHHHHH--------------------HHhCCCcCCCCeEEEEeccCCCCcHH
Confidence            344443 7889999999999988 7777766654                    11122112234788888864 221  


Q ss_pred             -HHHHHHHHHcC--------C-C--cEEEecCCCCcccHHHHHhcCcEEEEeccCC--CCCCCcHHHHHHHhcCCcEEEe
Q 011979          329 -ESYEEKIRRLR--------L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS--SGLDLPMKVVDMFGCGLPVCAV  394 (473)
Q Consensus       329 -~~l~~~~~~~~--------l-~--~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s--~~e~~p~kv~Eama~G~PvI~~  394 (473)
                       ..+-+++....        + +  +|.|+.- ...+-...++..||+-..   .|  ..|..|+.=+=+|..|.+.++|
T Consensus       585 aK~iIklI~~va~~in~Dp~v~~~lkVVFlen-Y~VslAe~iipaaDvseq---is~ag~EASGTsnMK~~lNGaltlgt  660 (797)
T cd04300         585 AKLIIKLINAVADVVNNDPDVGDKLKVVFLPN-YNVSLAEKIIPAADLSEQ---ISTAGKEASGTGNMKFMLNGALTIGT  660 (797)
T ss_pred             HHHHHHHHHHHHHHhccChhcCCceEEEEeCC-CChHHHHHhhhhhhhhhh---CCCCCccccCCchhhHHhcCceeeec
Confidence             22222222211        2 2  6888876 777788899999999998   44  4578888889999999999999


Q ss_pred             ccCccccceec--CCceEEeC-CHHHHHH
Q 011979          395 SYSCIEELVKV--DKNGLLFS-SSSELAD  420 (473)
Q Consensus       395 ~~~~~~e~i~~--~~~G~~~~-~~~~la~  420 (473)
                      -.|...|+.+.  +.|++++. +.+++.+
T Consensus       661 lDGanvEi~e~vG~eN~fiFG~~~~ev~~  689 (797)
T cd04300         661 LDGANVEIAEEVGEENIFIFGLTAEEVEA  689 (797)
T ss_pred             ccchhHHHHHHhCcCcEEEeCCCHHHHHH
Confidence            88888887776  78999997 5555543

It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis

Probab=93.73  E-value=6.5  Score=37.38  Aligned_cols=48  Identities=27%  Similarity=0.327  Sum_probs=38.7

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY  396 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~  396 (473)
                      .++.......+.+++..+++++|++|.   ....     ..+=|+++|+|+|+-++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~Is---~RlH-----~~I~a~~~g~P~i~i~y  284 (286)
T PF04230_consen  237 FNVIIIDYSLSPDELLELISQADLVIS---MRLH-----GAILALSLGVPVIAISY  284 (286)
T ss_pred             cceeEecCCCCHHHHHHHHhcCCEEEe---cCCH-----HHHHHHHcCCCEEEEec
Confidence            456666666889999999999999997   3433     66889999999999754

CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].

>PLN02152 indole-3-acetate beta-glucosyltransferase

Probab=93.51  E-value=12  Score=39.95  Aligned_cols=79  Identities=16%  Similarity=0.209  Sum_probs=51.8

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----CccccceecC-CceEEe---
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVD-KNGLLF---  412 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i~~~-~~G~~~---  412 (473)
                      ++..+. .|+|+.+   +|...++..+.   +++.  .++++||+.+|+|+|+...    ......+.+. +.|+-.   
T Consensus       327 ~~g~v~-~W~PQ~~---iL~h~~vg~fv---tH~G--~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~  397 (455)
T PLN02152        327 EVGMIV-SWCSQIE---VLRHRAVGCFV---THCG--WSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVREN  397 (455)
T ss_pred             CCeEEE-eeCCHHH---HhCCcccceEE---eeCC--cccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecC
Confidence            455555 5899766   67788876662   3221  2388999999999999863    2333344331 234433   


Q ss_pred             -C---CHHHHHHHHHHHHhC
Q 011979          413 -S---SSSELADQLLMLFKG  428 (473)
Q Consensus       413 -~---~~~~la~~i~~l~~~  428 (473)
                       +   +.+++++++.+++++
T Consensus       398 ~~~~~~~e~l~~av~~vm~~  417 (455)
T PLN02152        398 SEGLVERGEIRRCLEAVMEE  417 (455)
T ss_pred             cCCcCcHHHHHHHHHHHHhh
Confidence             1   478999999999974

>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases

Probab=93.11  E-value=0.45  Score=53.67  Aligned_cols=144  Identities=17%  Similarity=0.153  Sum_probs=99.5

Q ss_pred             cCCCCCeEEEEEeeccCCCCHHH-HHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCC-CCh--
Q 011979          253 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDK--  328 (473)
Q Consensus       253 ~~~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g-~~~--  328 (473)
                      +.|+.- ..+++=|+.+.|...+ ++..+..+.+                    +.+.+........+++.|+- |.-  
T Consensus       523 ldp~sl-fdvq~KR~heYKRq~LNil~ii~~y~~--------------------i~~~p~~~~~P~~~IFaGKAaP~y~~  581 (794)
T TIGR02093       523 VDPNSI-FDVQVKRLHEYKRQLLNVLHVIYLYNR--------------------IKEDPPKDIVPRTVIFGGKAAPGYHM  581 (794)
T ss_pred             cCcccc-chhhheechhhhHHHHHHhhhHHHHHH--------------------HHhCCCcCCCCeEEEEEecCCCCcHH
Confidence            344433 6788899999999988 7777766654                    11111111224688888864 221  


Q ss_pred             -HHHHHHHHHcC--------C-C--cEEEecCCCCcccHHHHHhcCcEEEEeccCC--CCCCCcHHHHHHHhcCCcEEEe
Q 011979          329 -ESYEEKIRRLR--------L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS--SGLDLPMKVVDMFGCGLPVCAV  394 (473)
Q Consensus       329 -~~l~~~~~~~~--------l-~--~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s--~~e~~p~kv~Eama~G~PvI~~  394 (473)
                       +.+-+++....        + +  +|.|+.- ...+-...++..||+-..   .|  ..|..|+.=+=+|..|.+.|+|
T Consensus       582 aK~iIklI~~va~~iN~Dp~v~~~lkVVFlen-Y~VslAe~iipaaDvseq---istag~EASGTsnMK~alNGaltlgt  657 (794)
T TIGR02093       582 AKLIIKLINSVAEVVNNDPAVGDKLKVVFVPN-YNVSLAELIIPAADLSEQ---ISTAGKEASGTGNMKFMLNGALTIGT  657 (794)
T ss_pred             HHHHHHHHHHHHHHhccChhhCCceeEEEeCC-CChHHHHHhhhhhhhhhh---CCCCCccccCcchhHHHhcCcceeec
Confidence             22333333222        2 2  6888876 777888899999999998   34  4578888889999999999999


Q ss_pred             ccCccccceec--CCceEEeC-CHHHHHHH
Q 011979          395 SYSCIEELVKV--DKNGLLFS-SSSELADQ  421 (473)
Q Consensus       395 ~~~~~~e~i~~--~~~G~~~~-~~~~la~~  421 (473)
                      -.|...|+.++  +.|++++. +.+++.+.
T Consensus       658 lDGanvEi~e~vG~eN~fiFG~~~~ev~~~  687 (794)
T TIGR02093       658 LDGANVEIREEVGAENIFIFGLTVEEVEAL  687 (794)
T ss_pred             ccchhHHHHHHhCcccEEEcCCCHHHHHHH
Confidence            88888888876  78999997 55555543

This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.

>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2

Probab=93.02  E-value=3  Score=44.66  Aligned_cols=76  Identities=11%  Similarity=-0.134  Sum_probs=48.1

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHH---HHH--HHHHHHHhhcCCEEEEcC
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFV---SIY--RWIEKYYGKMANGCLCVT  174 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~---~~~--~~~e~~~~~~ad~vi~vS  174 (473)
                      ..||+||.|.   ..+..++.+++...++|...+.|.++-+.+..+--.+..+.   .+.  --.|...++.||.|||.|
T Consensus       400 ~~PdlI~GnY---sDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST  476 (550)
T PF00862_consen  400 GKPDLIIGNY---SDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITST  476 (550)
T ss_dssp             S--SEEEEEH---HHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESS
T ss_pred             CCCcEEEecc---CcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcc
Confidence            6899999998   77888888999999999999999997433321111122221   111  223677778999999998


Q ss_pred             HHHH
Q 011979          175 QAMQ  178 (473)
Q Consensus       175 ~~~~  178 (473)
                      ....
T Consensus       477 ~QEI  480 (550)
T PF00862_consen  477 YQEI  480 (550)
T ss_dssp             HHHH
T ss_pred             hHhh
Confidence            7444

4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.

>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes

Probab=92.94  E-value=0.98  Score=44.80  Aligned_cols=86  Identities=10%  Similarity=0.087  Sum_probs=57.2

Q ss_pred             hhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhh-hhcCC----------CchHHHHHHHHHHHHhhc
Q 011979           98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLS-LSLGR----------RSHFVSIYRWIEKYYGKM  166 (473)
Q Consensus        98 ~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~-~~~~~----------~~~~~~~~~~~e~~~~~~  166 (473)
                      ...+.|++|+.+..  .+.+++..++...+.|++++-|+.. +-.+ .....          +..+.++++.+-+.++..
T Consensus       169 ~lP~advyHsvstG--yAgl~g~~~k~~~g~P~lLTEHGIY-~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~  245 (268)
T PF11997_consen  169 PLPKADVYHSVSTG--YAGLLGALAKYRYGRPFLLTEHGIY-TREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRA  245 (268)
T ss_pred             cCCCCCEEecCCcc--HHHHHHHHHHHHhCCCEEEecCCcc-HHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHh
Confidence            45678999987743  3344577888889999999999983 2111 00000          122235667778888999


Q ss_pred             CCEEEEcCHHHHHHHHHHhCC
Q 011979          167 ANGCLCVTQAMQHELAQNWGI  187 (473)
Q Consensus       167 ad~vi~vS~~~~~~l~~~~g~  187 (473)
                      ||.|++.++..+. .+...|.
T Consensus       246 Ad~I~~l~~~n~~-~q~~~Ga  265 (268)
T PF11997_consen  246 ADRITPLYEYNRE-WQIELGA  265 (268)
T ss_pred             hCeecccchhhHH-HHHHhCC
Confidence            9999999998764 3333454

It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.

>PLN02207 UDP-glycosyltransferase

Probab=92.91  E-value=1.4  Score=47.26  Aligned_cols=78  Identities=17%  Similarity=0.165  Sum_probs=50.5

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----Cccccc-eecCCceEEe---
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEEL-VKVDKNGLLF---  412 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~-i~~~~~G~~~---  412 (473)
                      ++..+. .|+|+.++   |....+..+.   +++.  -++++||+.+|+|+|+-..    ...... +..-+.|+-.   
T Consensus       332 ~~g~i~-~W~PQ~~I---L~H~~vg~Fv---TH~G--wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~  402 (468)
T PLN02207        332 GRGMIC-GWSPQVEI---LAHKAVGGFV---SHCG--WNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLD  402 (468)
T ss_pred             CCeEEE-EeCCHHHH---hcccccceee---ecCc--cccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecc
Confidence            466566 58999775   5555564442   2221  1388999999999999863    233343 3335566522   


Q ss_pred             --------CCHHHHHHHHHHHHh
Q 011979          413 --------SSSSELADQLLMLFK  427 (473)
Q Consensus       413 --------~~~~~la~~i~~l~~  427 (473)
                              -+.+++.++|.+++.
T Consensus       403 ~~~~~~~~v~~e~i~~av~~vm~  425 (468)
T PLN02207        403 YRVHSDEIVNANEIETAIRCVMN  425 (468)
T ss_pred             cccccCCcccHHHHHHHHHHHHh
Confidence                    157899999999996

>PRK14985 maltodextrin phosphorylase; Provisional

Probab=92.19  E-value=0.52  Score=53.14  Aligned_cols=137  Identities=15%  Similarity=0.154  Sum_probs=95.5

Q ss_pred             EEEEEeeccCCCCHHH-HHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCC-CCh---HHHHHH
Q 011979          260 LVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDK---ESYEEK  334 (473)
Q Consensus       260 ~i~~~G~~~~~K~~~~-li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g-~~~---~~l~~~  334 (473)
                      ..+++=|+.+.|...+ ++..+..+.+                    +.+.+........+++.|+- |.-   ..+-++
T Consensus       531 fdvq~kR~heYKRq~Lnil~ii~~y~~--------------------i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIkl  590 (798)
T PRK14985        531 FDVQIKRLHEYKRQHLNLLHILALYKE--------------------IRENPQADRVPRVFLFGAKAAPGYYLAKNIIFA  590 (798)
T ss_pred             chhhHhhhhhhhhhhhHhhhhHHHHHH--------------------HHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHH
Confidence            6778899999999888 7777666654                    11111112234788888874 221   222222


Q ss_pred             HHHcC--------C-C--cEEEecCCCCcccHHHHHhcCcEEEEeccCC--CCCCCcHHHHHHHhcCCcEEEeccCcccc
Q 011979          335 IRRLR--------L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS--SGLDLPMKVVDMFGCGLPVCAVSYSCIEE  401 (473)
Q Consensus       335 ~~~~~--------l-~--~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s--~~e~~p~kv~Eama~G~PvI~~~~~~~~e  401 (473)
                      +....        + +  +|.|+.- ....-...++..||+-..   .|  ..|..|+.=+=+|..|.+.++|-.|...|
T Consensus       591 I~~va~~in~Dp~v~~~lkVVFlen-Y~VslAe~lipaaDvseq---is~ag~EASGTsnMK~amNGaLtlgtlDGanvE  666 (798)
T PRK14985        591 INKVAEVINNDPLVGDKLKVVFLPD-YCVSAAELLIPAADISEQ---ISTAGKEASGTGNMKLALNGALTVGTLDGANVE  666 (798)
T ss_pred             HHHHHHHhcCChhhCCceeEEEeCC-CChHHHHHHhhhhhhhhh---CCCCCccccCcchhHHHhcCceeeecccchHHH
Confidence            22221        1 2  6888876 777888899999999998   44  45788888899999999999998888888


Q ss_pred             ceec--CCceEEeC-CHHHHHH
Q 011979          402 LVKV--DKNGLLFS-SSSELAD  420 (473)
Q Consensus       402 ~i~~--~~~G~~~~-~~~~la~  420 (473)
                      +.+.  +.|||++. +.+++.+
T Consensus       667 i~e~vG~eN~f~fG~~~~ev~~  688 (798)
T PRK14985        667 IAEQVGEENIFIFGHTVEQVKA  688 (798)
T ss_pred             HHHHhCcCcEEEeCCCHHHHHH
Confidence            7765  78999997 5555444

>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional

Probab=92.16  E-value=1.1  Score=45.17  Aligned_cols=69  Identities=14%  Similarity=0.038  Sum_probs=48.0

Q ss_pred             CEEEEEEcCCC-ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe
Q 011979          316 RLLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV  394 (473)
Q Consensus       316 ~~~l~ivG~g~-~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~  394 (473)
                      +..+++.|+++ +.+..++.++ . .+++.+.|. .+-.++..+++.||++|.   ..++     .+==|.|+|+|+|+-
T Consensus       210 ~~~ivl~~G~~~e~~~~~~i~~-~-~~~~~l~g~-~sL~elaali~~a~l~I~---nDSG-----p~HlA~A~g~p~val  278 (322)
T PRK10964        210 GLRIKLPWGAEHEEQRAKRLAE-G-FPYVEVLPK-LSLEQVARVLAGAKAVVS---VDTG-----LSHLTAALDRPNITL  278 (322)
T ss_pred             CCeEEEeCCCHHHHHHHHHHHc-c-CCcceecCC-CCHHHHHHHHHhCCEEEe---cCCc-----HHHHHHHhCCCEEEE
Confidence            45677764344 3333343333 2 245777787 889999999999999998   5565     444578999999996


Q ss_pred             c
Q 011979          395 S  395 (473)
Q Consensus       395 ~  395 (473)
                      -
T Consensus       279 f  279 (322)
T PRK10964        279 Y  279 (322)
T ss_pred             E
Confidence            3

>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane []

Probab=92.07  E-value=1.4  Score=40.72  Aligned_cols=68  Identities=19%  Similarity=0.184  Sum_probs=37.7

Q ss_pred             CCCCEEEEeCCCchh-HHHHHHHHHhh--CCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHH
Q 011979          100 ASPDVFLVQNPPSVP-TLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQA  176 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~-~~~~~~~~~~~--~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~  176 (473)
                      .+||+|++++|.... ...++++...+  .+.++||-- .+.      +....+.-.+       .+++.||.+++.-++
T Consensus        91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIE-S~a------Rv~~lSlTGk-------lly~~aD~f~VQW~~  156 (170)
T PF08660_consen   91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIE-SFA------RVKTLSLTGK-------LLYPFADRFIVQWEE  156 (170)
T ss_pred             hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEE-eee------ecCCCchHHH-------HHHHhCCEEEEcCHH
Confidence            679999999975542 22222222211  278877611 110      1223333233       334479999999998


Q ss_pred             HHHHH
Q 011979          177 MQHEL  181 (473)
Q Consensus       177 ~~~~l  181 (473)
                      +++.+
T Consensus       157 l~~~y  161 (170)
T PF08660_consen  157 LAEKY  161 (170)
T ss_pred             HHhHC
Confidence            77543

>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=91.94  E-value=4.4  Score=45.44  Aligned_cols=137  Identities=15%  Similarity=0.153  Sum_probs=85.2

Q ss_pred             eEEEEEeeccCCCCHHH-HHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCC-CCh---HHHHH
Q 011979          259 ALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDK---ESYEE  333 (473)
Q Consensus       259 ~~i~~~G~~~~~K~~~~-li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g-~~~---~~l~~  333 (473)
                      ...+++-|+.+.|...+ ++..+..+.+                    +.+..........+++.|+- |.-   +.+-+
T Consensus       445 lfdv~~rR~heYKRq~LniL~ii~~y~r--------------------ik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk  504 (713)
T PF00343_consen  445 LFDVQARRFHEYKRQLLNILHIIDRYNR--------------------IKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIK  504 (713)
T ss_dssp             EEEEEES-SCCCCTHHHHHHHHHHHHHH--------------------HHHSTTSCCS-EEEEEE----TT-HHHHHHHH
T ss_pred             hhhhhhhhcccccccCcccccHHHHHHH--------------------HHhcccCCCCCeEEEEeccCCCCcHHHHHHHH
Confidence            36789999999999888 4444555443                    11111112234789999975 321   22333


Q ss_pred             HHHHc--------CC-C--cEEEecCCCCcccHHHHHhcCcEEEEeccCC--CCCCCcHHHHHHHhcCCcEEEeccCccc
Q 011979          334 KIRRL--------RL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS--SGLDLPMKVVDMFGCGLPVCAVSYSCIE  400 (473)
Q Consensus       334 ~~~~~--------~l-~--~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s--~~e~~p~kv~Eama~G~PvI~~~~~~~~  400 (473)
                      ++...        .+ +  +|.|+.- .+..-...++..+|+-..   .|  ..|..|+.-+=+|..|.+-+++-.|..-
T Consensus       505 ~I~~va~~in~Dp~v~~~lkVvFlen-YdvslA~~lipg~DVwln---~p~~p~EASGTSgMK~~~NGaL~lstlDG~ni  580 (713)
T PF00343_consen  505 LINNVAEVINNDPEVGDRLKVVFLEN-YDVSLAEKLIPGVDVWLN---IPTRPKEASGTSGMKAAMNGALNLSTLDGWNI  580 (713)
T ss_dssp             HHHHHHHHHCT-TTTCCGEEEEEETT--SHHHHHHHGGG-SEEEE------TTSSSS-SHHHHHHHTT-EEEEESSTCHH
T ss_pred             HHHHHHHHHhcChhhccceeEEeecC-CcHHHHHHHhhhhhhhhh---CCCCCccccCCCcchhhcCCCeEEecccchhH
Confidence            32221        22 2  6899876 777788889999999999   34  5588999999999999999999888877


Q ss_pred             cceec--CCceEEeC-CHHHHH
Q 011979          401 ELVKV--DKNGLLFS-SSSELA  419 (473)
Q Consensus       401 e~i~~--~~~G~~~~-~~~~la  419 (473)
                      |+.+.  ..+++++. +.+++.
T Consensus       581 Ei~e~vG~eN~fiFG~~~~ev~  602 (713)
T PF00343_consen  581 EIAEAVGEENIFIFGLTAEEVE  602 (713)
T ss_dssp             HHHHHH-GGGSEEES-BHHHHH
T ss_pred             HHHHhcCCCcEEEcCCCHHHHH
Confidence            77643  45789997 455543

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....

>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT

Probab=91.22  E-value=2.3  Score=41.89  Aligned_cols=70  Identities=19%  Similarity=0.224  Sum_probs=45.6

Q ss_pred             CCCEEEEEEcCCCCh--HHHHHHHHHc-CCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCc
Q 011979          314 YPRLLFIITGKGPDK--ESYEEKIRRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLP  390 (473)
Q Consensus       314 ~~~~~l~ivG~g~~~--~~l~~~~~~~-~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~P  390 (473)
                      .|+..++|-=...+.  ... ....++ +..++.+...   .-.+..++..||.++.   .++.     +-+||+.+|+|
T Consensus       153 ~p~~~lvvK~HP~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~Ll~~s~~Vvt---inSt-----vGlEAll~gkp  220 (269)
T PF05159_consen  153 NPDAKLVVKPHPDERGGNKY-SYLEELPNLPNVVIIDD---DVNLYELLEQSDAVVT---INST-----VGLEALLHGKP  220 (269)
T ss_pred             CCCCEEEEEECchhhCCCCh-hHhhhhhcCCCeEEECC---CCCHHHHHHhCCEEEE---ECCH-----HHHHHHHcCCc
Confidence            567887765532110  111 222222 2356666643   6789999999999998   3333     66999999999


Q ss_pred             EEEec
Q 011979          391 VCAVS  395 (473)
Q Consensus       391 vI~~~  395 (473)
                      |++-.
T Consensus       221 Vi~~G  225 (269)
T PF05159_consen  221 VIVFG  225 (269)
T ss_pred             eEEec
Confidence            99964

Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport

>PLN02992 coniferyl-alcohol glucosyltransferase

Probab=90.44  E-value=3  Score=44.91  Aligned_cols=78  Identities=13%  Similarity=0.121  Sum_probs=53.2

Q ss_pred             cEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----Cccccce-ecCCceEEeC---
Q 011979          342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELV-KVDKNGLLFS---  413 (473)
Q Consensus       342 ~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i-~~~~~G~~~~---  413 (473)
                      ++.+. .|+|+.+   ++....+..+.   +++.  -++++||+.+|+|+|+...    ......+ ..-+.|+..+   
T Consensus       339 g~vv~-~W~PQ~~---iL~h~~vg~Fi---tH~G--~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~  409 (481)
T PLN02992        339 GFVVP-SWAPQAE---ILAHQAVGGFL---THCG--WSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPK  409 (481)
T ss_pred             CEEEe-ecCCHHH---HhCCcccCeeE---ecCc--hhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCC
Confidence            46665 4798876   56677774442   3221  2489999999999999863    3334444 3556676652   


Q ss_pred             ---CHHHHHHHHHHHHhC
Q 011979          414 ---SSSELADQLLMLFKG  428 (473)
Q Consensus       414 ---~~~~la~~i~~l~~~  428 (473)
                         +.+++++++.+++.+
T Consensus       410 ~~~~~~~l~~av~~vm~~  427 (481)
T PLN02992        410 EVISRSKIEALVRKVMVE  427 (481)
T ss_pred             CcccHHHHHHHHHHHhcC
Confidence               478999999999975

>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P

Probab=90.08  E-value=26  Score=36.42  Aligned_cols=72  Identities=18%  Similarity=0.226  Sum_probs=51.2

Q ss_pred             CCEEEEEEcCCCChHHHHHHHH----------HcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHH
Q 011979          315 PRLLFIITGKGPDKESYEEKIR----------RLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDM  384 (473)
Q Consensus       315 ~~~~l~ivG~g~~~~~l~~~~~----------~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Ea  384 (473)
                      ..+.+++.+ |.....+.....          ..+-=.+.++++ +|++++..+|..||+.++     +||+   +++=|
T Consensus       209 ~pv~llvp~-g~~~~~~~~~~~~~~~~~g~~~~~g~l~l~~lPF-~~Q~~yD~LLw~cD~NfV-----RGED---SfVRA  278 (374)
T PF10093_consen  209 KPVHLLVPE-GRALNSLAAWLGDALLQAGDSWQRGNLTLHVLPF-VPQDDYDRLLWACDFNFV-----RGED---SFVRA  278 (374)
T ss_pred             CCeEEEecC-CccHHHHHHHhccccccCccccccCCeEEEECCC-CCHHHHHHHHHhCccceE-----ecch---HHHHH
Confidence            346666666 444444544332          111125888888 999999999999999998     5543   67899


Q ss_pred             HhcCCcEEEecc
Q 011979          385 FGCGLPVCAVSY  396 (473)
Q Consensus       385 ma~G~PvI~~~~  396 (473)
                      .-+|+|.|=.-+
T Consensus       279 qwAgkPFvWhIY  290 (374)
T PF10093_consen  279 QWAGKPFVWHIY  290 (374)
T ss_pred             HHhCCCceEecC
Confidence            999999998754

The function is unknown.

>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]

Probab=86.68  E-value=7.8  Score=41.33  Aligned_cols=106  Identities=18%  Similarity=0.281  Sum_probs=58.3

Q ss_pred             CCEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe
Q 011979          315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV  394 (473)
Q Consensus       315 ~~~~l~ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~  394 (473)
                      +++.|++.=.++....+.+...+.+-.+|.+. .|+|+.++.  +....+..+   -+++ |++ .++|+..+|+|+|+.
T Consensus       309 ~~~~FiW~~~~~~~~~~~~~~~~~~~~nV~~~-~W~PQ~~ll--l~H~~v~~F---vTHg-G~n-St~E~~~~GvP~v~~  380 (496)
T KOG1192|consen  309 QGVTFLWKYRPDDSIYFPEGLPNRGRGNVVLS-KWAPQNDLL--LDHPAVGGF---VTHG-GWN-STLESIYSGVPMVCV  380 (496)
T ss_pred             CCceEEEEecCCcchhhhhcCCCCCcCceEEe-cCCCcHHHh--cCCCcCcEE---EECC-ccc-HHHHHHhcCCceecC
Confidence            46667776655433221111111011367776 589999987  444334444   1222 232 669999999999976


Q ss_pred             c----cCcccc-ceecCCceEEeC---CHHHHHHHHHHHHhC
Q 011979          395 S----YSCIEE-LVKVDKNGLLFS---SSSELADQLLMLFKG  428 (473)
Q Consensus       395 ~----~~~~~e-~i~~~~~G~~~~---~~~~la~~i~~l~~~  428 (473)
                      +    ..-.+. +..++..|+...   +..++.+++..++.+
T Consensus       381 Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~  422 (496)
T KOG1192|consen  381 PLFGDQPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILEN  422 (496)
T ss_pred             CccccchhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcC
Confidence            4    223333 444444555543   233377888888774

>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins

Probab=86.25  E-value=3.2  Score=33.92  Aligned_cols=73  Identities=5%  Similarity=-0.112  Sum_probs=43.2

Q ss_pred             CCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEE
Q 011979           53 HPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV  132 (473)
Q Consensus        53 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~  132 (473)
                      .+|++++.+|..+  .....-++..+ ....+++       .++.+ ++.|+||.|...+.... -+.+.++..+.+.|+
T Consensus        13 tngLKVYYlP~~~--~~~~~t~Pt~~-~~~pl~R-------~Ilir-E~I~IVHgH~a~S~l~h-E~i~hA~~mGlktVf   80 (90)
T PF08288_consen   13 TNGLKVYYLPLKV--FYNQCTLPTLF-GSFPLLR-------NILIR-ERIDIVHGHQAFSTLCH-EAILHARTMGLKTVF   80 (90)
T ss_pred             CCCeEEEeecchh--hhcCcchHHHH-HhhHHHH-------HHHHH-cCeeEEEeehhhhHHHH-HHHHHHHhCCCcEEe
Confidence            5689999998332  22222222222 1222222       22222 88999999985433333 355667778999999


Q ss_pred             EecCc
Q 011979          133 DWHNF  137 (473)
Q Consensus       133 ~~h~~  137 (473)
                      +-|.+
T Consensus        81 TDHSL   85 (90)
T PF08288_consen   81 TDHSL   85 (90)
T ss_pred             ecccc
Confidence            99987

These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process

>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=83.37  E-value=16  Score=39.19  Aligned_cols=125  Identities=10%  Similarity=0.182  Sum_probs=78.8

Q ss_pred             CCEEEEEEcC---CCChHHHHHHHHH-cCC-CcEEEecCCCC---cccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHh
Q 011979          315 PRLLFIITGK---GPDKESYEEKIRR-LRL-KRVAFRTMWLS---AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFG  386 (473)
Q Consensus       315 ~~~~l~ivG~---g~~~~~l~~~~~~-~~l-~~V~~~g~~v~---~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama  386 (473)
                      ...-+.+.|.   |.-+..+-++.+. .+. ..+.+..+-.+   ...+.+.++.|-.+++|   ...+...-.++||+.
T Consensus       289 R~~L~~F~G~~~~~~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p---~Gd~~ts~R~fdai~  365 (464)
T KOG1021|consen  289 RPILAFFAGAPAGGQIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCP---PGDTPTSPRLFDAIV  365 (464)
T ss_pred             CceEEEEeccccCCcHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECC---CCCCcccHhHHHHHH
Confidence            4567778886   2334555555554 111 23333322122   47889999999999995   333333449999999


Q ss_pred             cC-CcEEEecc--CccccceecCCceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011979          387 CG-LPVCAVSY--SCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLE  445 (473)
Q Consensus       387 ~G-~PvI~~~~--~~~~e~i~~~~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~  445 (473)
                      +| .|||.++.  ....+.++-...+++++ .+++-+.|.+++...+  .+....|+++..+
T Consensus       366 ~gCvPViisd~~~lpf~~~~d~~~fSV~v~-~~~v~~~~~~iL~~i~--~~~~~~m~~~v~~  424 (464)
T KOG1021|consen  366 SGCVPVIISDGIQLPFGDVLDWTEFSVFVP-EKDVPELIKNILLSIP--EEEVLRMRENVIR  424 (464)
T ss_pred             hCCccEEEcCCcccCcCCCccceEEEEEEE-HHHhhhHHHHHHHhcC--HHHHHHHHHHHHH
Confidence            99 69999974  45566666666666666 5555555566655433  4556778888774

>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]

Probab=81.13  E-value=76  Score=33.26  Aligned_cols=83  Identities=19%  Similarity=0.197  Sum_probs=56.8

Q ss_pred             cccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc-----cccce---ecCCceEEeCCHHHHHHHHH
Q 011979          352 AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC-----IEELV---KVDKNGLLFSSSSELADQLL  423 (473)
Q Consensus       352 ~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~-----~~e~i---~~~~~G~~~~~~~~la~~i~  423 (473)
                      ..++..++..+|++|.   .     ++.+.+|+|...+|||.-....     .....   ....-|-++.+.+++.++|.
T Consensus       277 ~~di~dll~~sDiLIT---D-----ySSv~fdf~~l~KPiify~~D~~~y~~~rg~~~d~~~~~Pg~~~~~~~~li~ai~  348 (388)
T COG1887         277 NADINDLLLVSDILIT---D-----YSSVIFDFMLLDKPIIFYTYDLEQYDELRGFYLDYKFEAPGEVVETQEELIDAIK  348 (388)
T ss_pred             chhHHHHHhhhCEEEe---e-----chHHHHHHHHhcCcEEEEecChHHHHhhhhhhhhHHhcCCccccccHHHHHHHHH
Confidence            5899999999999997   2     3448999999999999974221     11111   22345667778889999999


Q ss_pred             HHHhCCCCCHHHHHHHHHHHHH
Q 011979          424 MLFKGFPDDSDVLKKLRNGTLE  445 (473)
Q Consensus       424 ~l~~~~~~~~~~~~~~~~~~~~  445 (473)
                      ....+   +....++++..-.+
T Consensus       349 ~~~~~---~~~~~~k~~~~~~~  367 (388)
T COG1887         349 PYDED---GNYDLEKLRVFNDK  367 (388)
T ss_pred             hhhcc---cchhHHHHHHHHHh
Confidence            88775   23334444444444

>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase []

Probab=80.88  E-value=11  Score=34.20  Aligned_cols=69  Identities=17%  Similarity=0.283  Sum_probs=42.3

Q ss_pred             hCCCCEEEEeCCCchhHHH-HHHHHHh--hCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCH
Q 011979           99 IASPDVFLVQNPPSVPTLV-AVKWASS--LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ  175 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~-~~~~~~~--~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~  175 (473)
                      ..+||+|+++.|.  ++.+ +..+..+  +.++|++.-+=|+. .     .. ..           ++...+|..++.|+
T Consensus        87 ~~~PD~IIsThp~--~~~~~l~~lk~~~~~~~~p~~tvvTD~~-~-----~H-~~-----------W~~~~~D~y~Vase  146 (169)
T PF06925_consen   87 EFQPDLIISTHPF--PAQVPLSRLKRRGRLPNIPVVTVVTDFD-T-----VH-PF-----------WIHPGVDRYFVASE  146 (169)
T ss_pred             hcCCCEEEECCcc--hhhhHHHHHHHhhcccCCcEEEEEcCCC-C-----CC-cC-----------eecCCCCEEEECCH
Confidence            4899999999873  3333 2333222  23577654333330 0     00 00           12357999999999


Q ss_pred             HHHHHHHHHhCCc
Q 011979          176 AMQHELAQNWGIK  188 (473)
Q Consensus       176 ~~~~~l~~~~g~~  188 (473)
                      .+++.+.+ .|++
T Consensus       147 ~~~~~l~~-~Gi~  158 (169)
T PF06925_consen  147 EVKEELIE-RGIP  158 (169)
T ss_pred             HHHHHHHH-cCCC
Confidence            99999988 5887

; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process

>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E

Probab=80.84  E-value=65  Score=32.29  Aligned_cols=140  Identities=9%  Similarity=0.071  Sum_probs=77.2

Q ss_pred             EEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChH--HHHHH---
Q 011979          260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE--SYEEK---  334 (473)
Q Consensus       260 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~--~l~~~---  334 (473)
                      +=+|+||++-.||+..+++.-.+..+                            .++++-++-|-.....  .+.+.   
T Consensus       185 v~~yigR~Tt~kG~~~mfD~h~~~lK----------------------------~~~~~t~~~GierS~A~~~i~d~~~~  236 (355)
T PF11440_consen  185 VNRYIGRQTTWKGPRRMFDLHEKILK----------------------------PAGFKTIMEGIERSPAKISIKDHGIP  236 (355)
T ss_dssp             EEEEE--SSGGG-HHHHHHHHHHTTT----------------------------TTT-EEEEE---SSTHHHHHHHTT--
T ss_pred             cceeeeeeeeecCcHHHhhhHHHhcC----------------------------CcchhHHhhhhhcCCceeeeecCCcc
Confidence            44799999999999999988777544                            5889999988433211  11111   


Q ss_pred             --------HHHcCC---CcEEEecCCCCcccHHHHHhcCcEEEEeccCC--C-CCCCcHHHHHHHhcCC-cEEEeccCcc
Q 011979          335 --------IRRLRL---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS--S-GLDLPMKVVDMFGCGL-PVCAVSYSCI  399 (473)
Q Consensus       335 --------~~~~~l---~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s--~-~e~~p~kv~Eama~G~-PvI~~~~~~~  399 (473)
                              +.+..+   .-+.++|+++ .+|..+.++.+-+++-...-.  + ...+-..-+|..|||. ||.-.+.|..
T Consensus       237 ~~y~~~~~~~~~~~~pN~~~~v~~~Yi-~~E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN  315 (355)
T PF11440_consen  237 YEYYPKLDCDEPKPAPNSPVPVYGPYI-RSEGLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGEN  315 (355)
T ss_dssp             EEEE-CTGGGG---SSS--EEEESS---HHHHHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHH
T ss_pred             cccCccccccCcccCCCCcceecchhh-hHHHHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeecccccc
Confidence                    111112   1388889844 788888899888887642222  1 2447779999999994 6666554432


Q ss_pred             -------ccceecCCceEEeC--CHHHHHHHHHHHHhC
Q 011979          400 -------EELVKVDKNGLLFS--SSSELADQLLMLFKG  428 (473)
Q Consensus       400 -------~e~i~~~~~G~~~~--~~~~la~~i~~l~~~  428 (473)
                             ..++.+....+.++  |.++-.+.|.++.++
T Consensus       316 ~r~~~D~~~~~~~~~~~I~~De~dle~T~ekl~E~a~~  353 (355)
T PF11440_consen  316 NRFTLDGTRYIDHPYSAIYFDENDLESTVEKLIEVANN  353 (355)
T ss_dssp             SB-TTTSSBGGSS--S-EEE-TTSHHHHHHHHHHHHT-
T ss_pred             ceeeecCceeeccCcceeEeccchHHHHHHHHHHHhcc
Confidence                   23455555555564  577777777776653

coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	473
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	2e-08
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	3e-08
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	1e-06
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	9e-06
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	3e-05
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	4e-05
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	1e-04

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394

 Score = 55.0 bits (133), Expect = 2e-08
 Identities = 61/448 (13%), Positives = 136/448 (30%), Gaps = 137/448 (30%)

Query: 24  QALSLARQMS---LEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80
               L +Q++    E+  +  G   P      +P+I+ H   +       + +     L 
Sbjct: 32  VGTELGKQLAERGHEIHFITSGL--PFRLNKVYPNIYFH---EVTVNQYSVFQYPPYDLA 86

Query: 81  LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSA--FIVDWHNFG 138
           L   + +          +  + D+  V     +P  +    A  +       +   H   
Sbjct: 87  LASKMAEV--------AQRENLDILHVHYA--IPHAICAYLAKQMIGERIKIVTTLHGTD 136

Query: 139 YTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLY--- 193
            T+L                + ++  + ++    V+ ++ +E  +          +Y   
Sbjct: 137 ITVLGSD--------PSLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFI 188

Query: 194 DQPPEFFHPTSLEE-KHELFCRLNK--ILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250
           D     +    + + K E     ++  ++H        +SN     K           + 
Sbjct: 189 D--ERVYFKRDMTQLKKEYGISESEKILIH--------ISN-FRKVK----------RVQ 227

Query: 251 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGK 310
                                    +++A        A I+ E D+              
Sbjct: 228 D------------------------VVQAF-------AKIVTEVDAK------------- 243

Query: 311 QYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAF---RTMWLSAEDYPLLLGSADLGV 366
                    ++ G GP+  +  + ++ L +  RV F   +      ++   LL  +D  +
Sbjct: 244 --------LLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQ------DNVAELLAMSD--L 287

Query: 367 CLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLL 423
            L  S        + +++   CG+P        I E+++    G L     ++ +ADQ +
Sbjct: 288 MLLLSEKES--FGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAI 345

Query: 424 MLFKGFPDDSDVLKKLRNGTLEMGLSAR 451
            L K    D ++ +        MG  AR
Sbjct: 346 QLLK----DEELHRN-------MGERAR 362

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166

 Score = 51.8 bits (125), Expect = 3e-08
 Identities = 15/155 (9%), Positives = 51/155 (32%), Gaps = 26/155 (16%)

Query: 314 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 372
              ++ ++ GKGPD++  +   ++L +     F    +++ +   +L +    + +H ++
Sbjct: 30  KQDIVLLLKGKGPDEKKIKLLAQKLGVKAEFGF----VNSNELLEILKTCT--LYVHAAN 83

Query: 373 S-GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGF 429
                  +  ++    G+     +               LF   ++ +L+ ++       
Sbjct: 84  VES--EAIACLEAISVGIVPVIANSPLSATRQFALDERSLFEPNNAKDLSAKIDWWL--- 138

Query: 430 PDDSDVLKKLRNGTLEMGLSARWATE---WEEHAK 461
            ++    ++       M      +      E    
Sbjct: 139 -ENKLERER-------MQNEYAKSALNYTLENSVI 165

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413

 Score = 49.4 bits (117), Expect = 1e-06
 Identities = 25/146 (17%), Positives = 42/146 (28%), Gaps = 17/146 (11%)

Query: 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS 373
                 I  G+             L           L+ EDY  LL  + +G+ L   S 
Sbjct: 274 SNEWKIISVGEKHKDI-------ALGKGIHLNSLGKLTLEDYADLLKRSSIGISL-MISP 325

Query: 374 GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS--ELADQLLMLFKGFPD 431
               P   ++M   GL V    Y    +L     N +     +   +A+ L+ L      
Sbjct: 326 HPSYP--PLEMAHFGLRVITNKYENK-DLSNWHSNIVSLEQLNPENIAETLVELC----M 378

Query: 432 DSDVLKKLRNGTLEMGLSARWATEWE 457
             +     +  +  M        E+ 
Sbjct: 379 SFNNRDVDKKESSNMMFYINEFNEFS 404

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 35/160 (21%), Positives = 56/160 (35%), Gaps = 28/160 (17%)

Query: 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCL-HTSS 372
            P    +I G G  + +       +  + V F    L  +D    L +AD+      T  
Sbjct: 227 RPDAQLLIVGSGRYESTLRRLATDVS-QNVKF-LGRLEYQDMINTLAAADIFAMPARTRG 284

Query: 373 SGLD---LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFK 427
            GLD   L +  ++   CG+PV A +     E V     GL+   S   +L++ L+ L  
Sbjct: 285 GGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETV-TPATGLVVEGSDVDKLSELLIEL-- 341

Query: 428 GFPDDSDVLKKLRNGTL--EMGLSAR-WATE---WEEHAK 461
                      L +      MG + R        WE   +
Sbjct: 342 -----------LDDPIRRAAMGAAGRAHVEAEWSWEIMGE 370

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 5e-06
 Identities = 58/377 (15%), Positives = 112/377 (29%), Gaps = 83/377 (22%)

Query: 101 SPDVFLVQNPPSVPTLVAVK-WASSLRRSAFIVDWHN---FGYTLLSLSLGRRSHFVS-- 154
              VF   N   +   + ++     LR +  ++        G T ++L +          
Sbjct: 122 DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL-IDGVLGSGKTWVALDVCLSYKVQCKM 180

Query: 155 ---IYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHEL 211
              I+ W+           L + Q + +++  NW    T   D              H +
Sbjct: 181 DFKIF-WLNLKNCNSPETVLEMLQKLLYQIDPNW----TSRSDHSSNIKLRI-----HSI 230

Query: 212 FCRLNKILHQP-----LGVQDCVSNGMEGQKAD---ETIFT----SLAGIDVFLKPNRPA 259
              L ++L        L V   V N       +   + + T     +            +
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290

Query: 260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNE---EVFLKEISDG------- 309
           L   S + TPDE   +LL+       R   +  E  +TN     +  + I DG       
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDC---RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW 347

Query: 310 KQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLH 369
           K     +L  II      + S         L+   +R M+              L V   
Sbjct: 348 KHVNCDKLTTII------ESSLNV------LEPAEYRKMFD------------RLSVF-- 381

Query: 370 TSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELV-KVDKNGLL----FSSSSELADQLLM 424
                  +P  ++ +    +       S +  +V K+ K  L+      S+  +    L 
Sbjct: 382 --PPSAHIPTILLSLIWFDVI-----KSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLE 434

Query: 425 LFKGFPDDSDVLKKLRN 441
           L     ++  + + + +
Sbjct: 435 LKVKLENEYALHRSIVD 451

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 2e-04
 Identities = 33/269 (12%), Positives = 74/269 (27%), Gaps = 75/269 (27%)

Query: 256 NRPALVVSSTSWTPDEDFGILLEA--ALMYDRRVAAILNEDDSTNE-------------- 299
            +  L V   ++  + D   + +   +++    +  I+   D+ +               
Sbjct: 18  YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEE 77

Query: 300 --EVFLKEISDGKQY--LYPRLLFIITGKGPDKESYEEKIRRL-------------RLKR 342
             + F++E+     Y  L   +             Y E+  RL             RL+ 
Sbjct: 78  MVQKFVEEVLR-INYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP 136

Query: 343 V-AFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE 401
               R   L               V +     G         + G G    A+   C+  
Sbjct: 137 YLKLRQALLELRPAK--------NVLID----G---------VLGSGKTWVALD-VCLSY 174

Query: 402 LVKVDKNGLLF-------SSSSELADQLLMLF----KGFPDDSDVLKKLRNGTLEMGLSA 450
            V+   +  +F       +S   + + L  L       +   SD    ++     +    
Sbjct: 175 KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234

Query: 451 RWATEWEEHAKPLI-------TEVISQFD 472
           R   + + +   L+        +  + F+
Sbjct: 235 RRLLKSKPYENCLLVLLNVQNAKAWNAFN 263

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416

 Score = 46.6 bits (111), Expect = 9e-06
 Identities = 29/163 (17%), Positives = 58/163 (35%), Gaps = 32/163 (19%)

Query: 314 YPRLLFIITGKGPD-----KESYEEKIRRLRLKR-VAFRTMWL--SAEDYPLLLGSADLG 365
            P +  ++ G            +E+ +R++     V   T  +   A +      ++D  
Sbjct: 260 IPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASD-- 317

Query: 366 VCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSC--IEELVKVDKNGLLFSSSSELADQL 422
           V L  S   G    + V +    G PV  +  +   I+  +   + G L   ++E  + +
Sbjct: 318 VILQMSIREGF--GLTVTEAMWKGKPV--IGRAVGGIKFQIVDGETGFLVRDANEAVEVV 373

Query: 423 LMLFKGFPDDSDVLKKLRNGTLEMGLSAR-WATE---WEEHAK 461
           L L K      +V K+       MG  A+    +     +H +
Sbjct: 374 LYLLK----HPEVSKE-------MGAKAKERVRKNFIITKHME 405

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 28/136 (20%), Positives = 44/136 (32%), Gaps = 28/136 (20%)

Query: 315 PRLLFIITGKGPDKESYEEKIRRLR---LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTS 371
                 I G     +  E   R++       V F    +S E+   L         L T+
Sbjct: 49  QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLG-SVSEEELIDLYSRCK--GLLCTA 105

Query: 372 SSGLDLPMKVVDMFG--------CGLPVCAVSYSCIEELVKVDKNGLLFSSSSE-LADQL 422
                      + FG         G PV AV+    +E V  +K G L ++    + D +
Sbjct: 106 KD---------EDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNADVNEIIDAM 156

Query: 423 LMLFKGFPDDSDVLKK 438
             + K    + D  KK
Sbjct: 157 KKVSK----NPDKFKK 168

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 23/167 (13%), Positives = 44/167 (26%), Gaps = 31/167 (18%)

Query: 314 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 372
                 +          +E    +L +   V F   +    D   L+ +AD  + LH + 
Sbjct: 225 LRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHF---FSGRNDVSELMAAAD--LLLHPAY 279

Query: 373 SGLDLPMKVVDMFG--------CGLPVCAVSYSCIEELVKVDKNGLLFSS---SSELADQ 421
                     +  G         GLPV   +       +     G + +      +L + 
Sbjct: 280 Q---------EAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEV 330

Query: 422 LLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI 468
           L          S +             +    +   E A  +IT  +
Sbjct: 331 LRKAL----TQSPLRMAWAENARHYADTQDLYS-LPEKAADIITGGL 372

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 9/109 (8%)

Query: 319 FIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLP 378
            ++ G   + E ++E  RR     V      +  E    LL SA   + +  + +G    
Sbjct: 191 LVLAGPAWEPEYFDEITRRYG-STVEPIGE-VGGERRLDLLASAHAVLAMSQAVTGPWGG 248

Query: 379 -------MKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 420
                    V +    G PV      C+ E+V      + + +     +
Sbjct: 249 IWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDFAPDE 297

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	473
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	100.0
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	100.0
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	100.0
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	100.0
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	100.0
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	100.0
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	100.0
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	100.0
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	100.0
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	100.0
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	100.0
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	100.0
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	100.0
3vue_A	536	GBSS-I, granule-bound starch synthase 1, chloropla	99.98
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	99.97
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	99.96
3beo_A	375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	99.95
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	99.95
1vgv_A	384	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.94
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	99.93
2vsy_A	568	XCC0866; transferase, glycosyl transferase, GT-B,	99.93
3rhz_A	339	GTF3, nucleotide sugar synthetase-like protein; gl	99.92
3nb0_A	725	Glycogen [starch] synthase isoform 2; glycogen syn	99.92
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	99.92
1uqt_A	482	Alpha, alpha-trehalose-phosphate synthase; glycosy	99.9
1v4v_A	376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	99.9
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	99.9
2xci_A	374	KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci	99.89
3t5t_A	496	Putative glycosyltransferase; GTB fold, pseudoglyc	99.85
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	99.82
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	99.81
3dzc_A	396	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.8
3ot5_A	403	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.77
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	99.76
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	99.72
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	99.7
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	99.68
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	99.67
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	99.65
2p6p_A	384	Glycosyl transferase; X-RAY-diffraction,urdamycina	99.57
2iya_A	424	OLEI, oleandomycin glycosyltransferase; carbohydra	99.46
4hwg_A	385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	99.45
2yjn_A	441	ERYCIII, glycosyltransferase; transferase, cytochr	99.36
3h4t_A	404	Glycosyltransferase GTFA, glycosyltransferase; van	99.24
1iir_A	415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	99.23
3q3e_A	631	HMW1C-like glycosyltransferase; N-glycosylation; 2	99.19
4amg_A	400	Snogd; transferase, polyketide biosynthesis, GT1 f	99.14
1rrv_A	416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	99.06
2o6l_A	170	UDP-glucuronosyltransferase 2B7; drug metabolism,	99.06
3hbf_A	454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	98.62
1l5w_A	796	Maltodextrin phosphorylase; enzymatic catalysis, s	98.55
2c1x_A	456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	98.53
2pq6_A	482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	98.46
2vch_A	480	Hydroquinone glucosyltransferase; glycosyltransfer	98.35
2acv_A	463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	98.28
2gj4_A	824	Glycogen phosphorylase, muscle form; transferase;	98.01
3hbm_A	282	UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je	97.96
2c4m_A	796	Glycogen phosphorylase; allosteric control, phosph	97.92
1psw_A	348	ADP-heptose LPS heptosyltransferase II; structural	97.88
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	97.85
4gyw_A	723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	97.85
3tov_A	349	Glycosyl transferase family 9; structural genomics	97.79
2jzc_A	224	UDP-N-acetylglucosamine transferase subunit ALG13;	96.58
2gt1_A	326	Lipopolysaccharide heptosyltransferase-1; GT-B fol	94.03
1ygp_A	879	Yeast glycogen phosphorylase; phosphorylated form,	93.22

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*

Probab=100.00  E-value=3.6e-38  Score=326.73  Aligned_cols=384  Identities=17%  Similarity=0.181  Sum_probs=270.4

Q ss_pred             CCCCeEEEEEec----------CCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCCcc-cccCCCEEEEEeecCCCCCC
Q 011979            2 GRRGRACVVVLG----------DLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAA-ILEHPSIHIHTMTQWPTIPR   69 (473)
Q Consensus         2 ~~~~~~~i~~~~----------~~g~s~r-~~~~a~~L~~~~g~eV~vi~~~~~~~~~~-~~~~~~i~i~~~~~~~~~~~   69 (473)
                      .+|++++++...          ..||..+ +..++..|.++ ||+|+|++......... ....+++++++++..+....
T Consensus        18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~   96 (438)
T 3c48_A           18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQ-GIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGL   96 (438)
T ss_dssp             -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHT-TCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSC
T ss_pred             cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhc-CCEEEEEecCCCCCCcccccccCCeEEEEecCCCcccc
Confidence            456677766642          2355444 34566777776 99999999765422111 12246899999883221111


Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCC-
Q 011979           70 GLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-  148 (473)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~-  148 (473)
                      ....+...+..+.+.+      +...+.+..+||+||+|.   .....++.++++..++|+|+++|+....... .... 
T Consensus        97 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~Div~~~~---~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~-~~~~~  166 (438)
T 3c48_A           97 SKEELPTQLAAFTGGM------LSFTRREKVTYDLIHSHY---WLSGQVGWLLRDLWRIPLIHTAHTLAAVKNS-YRDDS  166 (438)
T ss_dssp             CGGGGGGGHHHHHHHH------HHHHHHHTCCCSEEEEEH---HHHHHHHHHHHHHHTCCEEEECSSCHHHHSC-C----
T ss_pred             chhHHHHHHHHHHHHH------HHHHHhccCCCCEEEeCC---ccHHHHHHHHHHHcCCCEEEEecCCcccccc-ccccc
Confidence            1111222221111111      111122223599999997   3334345566666789999999998532110 0111 


Q ss_pred             CchHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCc---eEEeeCCC-CCCcccCChhHHHHHHHhhhhhccCCCC
Q 011979          149 RSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLG  224 (473)
Q Consensus       149 ~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g~~---~~vi~n~~-~~~f~~~~~~~~~~l~~~l~~~~~~~~~  224 (473)
                      .........++++.+.+.+|.++++|+.+++.+.+.+|.+   +.+++|+. .+.|.+.....+..++.+++        
T Consensus       167 ~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~--------  238 (438)
T 3c48_A          167 DTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELG--------  238 (438)
T ss_dssp             CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTT--------
T ss_pred             CCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHhcC--------
Confidence            1111233456778888999999999999999998878764   88999994 45666553333334555544        


Q ss_pred             cccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHh
Q 011979          225 VQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLK  304 (473)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~  304 (473)
                                                  +++++ .+++|+|++.+.||++.+++|+..+.++                  
T Consensus       239 ----------------------------~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~------------------  271 (438)
T 3c48_A          239 ----------------------------IPLHT-KVVAFVGRLQPFKGPQVLIKAVAALFDR------------------  271 (438)
T ss_dssp             ----------------------------CCSSS-EEEEEESCBSGGGCHHHHHHHHHHHHHH------------------
T ss_pred             ----------------------------CCCCC-cEEEEEeeecccCCHHHHHHHHHHHHhh------------------
Confidence                                        22233 3899999999999999999999999873                  


Q ss_pred             hhccCccccCC--CEEEEEEcC----CCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCC
Q 011979          305 EISDGKQYLYP--RLLFIITGK----GPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDL  377 (473)
Q Consensus       305 ~~~~~~~~~~~--~~~l~ivG~----g~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~  377 (473)
                               .|  +++|+|+|+    |+..+.++++++++++ ++|.|+|. ++.+++..+|+.||++|+   +|..|++
T Consensus       272 ---------~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~-~~~~~~~~~~~~adv~v~---ps~~e~~  338 (438)
T 3c48_A          272 ---------DPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDP-RPPSELVAVYRAADIVAV---PSFNESF  338 (438)
T ss_dssp             ---------CTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECC-CCHHHHHHHHHHCSEEEE---CCSCCSS
T ss_pred             ---------CCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCC-CChHHHHHHHHhCCEEEE---CccccCC
Confidence                     45  899999999    8888899999999999 79999998 999999999999999999   6788999


Q ss_pred             cHHHHHHHhcCCcEEEeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHH
Q 011979          378 PMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATE  455 (473)
Q Consensus       378 p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~  455 (473)
                      |++++|||+||+|||+++.++..+++.++.+|++++  |+++++++|.+++++    ++.+++|++++++...+++|+..
T Consensus       339 ~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~----~~~~~~~~~~~~~~~~~~s~~~~  414 (438)
T 3c48_A          339 GLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDD----DETRIRMGEDAVEHARTFSWAAT  414 (438)
T ss_dssp             CHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHhCCHHHH
Confidence            999999999999999999999999999999999997  799999999999995    89999999999998866999877


Q ss_pred             HHHHHHHHHHHHhh
Q 011979          456 WEEHAKPLITEVIS  469 (473)
Q Consensus       456 ~~~~~~~~~~~~~~  469 (473)
                      .+++ ..+++++++
T Consensus       415 ~~~~-~~~~~~~~~  427 (438)
T 3c48_A          415 AAQL-SSLYNDAIA  427 (438)
T ss_dssp             HHHH-HHHHHHHHH
T ss_pred             HHHH-HHHHHHHhh
Confidence            6663 445555543

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*

Probab=100.00  E-value=5.3e-38  Score=319.46  Aligned_cols=362  Identities=14%  Similarity=0.110  Sum_probs=270.9

Q ss_pred             CCCCCeEEEEEecCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCC-cccccCCCEEEEEeecCCCCCCCCcchhHHH
Q 011979            1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPH-AAILEHPSIHIHTMTQWPTIPRGLPKVLKPV   78 (473)
Q Consensus         1 m~~~~~~~i~~~~~~g~s~r~~~~a~~L~~~-~g~eV~vi~~~~~~~~-~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~   78 (473)
                      |+++++++++........++....+..+++. .||+|+|++....... .......++++++++...     ........
T Consensus         1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~   75 (394)
T 3okp_A            1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQDPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSV-----MLPTPTTA   75 (394)
T ss_dssp             ---CCCEEEEESCCTTSCSHHHHHHHHHHTTSCGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSS-----CCSCHHHH
T ss_pred             CCCCceEEEEeCccCCccchHHHHHHHHHHHhcCCeEEEEECCCCccchhhhccccceEEEEccccc-----cccchhhH
Confidence            7777778777654333345565556666654 4999999998754321 233346789999988311     11122223


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCC-eEEEEecCchhhhhhhhcCCCchHHHHHH
Q 011979           79 LLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRS-AFIVDWHNFGYTLLSLSLGRRSHFVSIYR  157 (473)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~-~~i~~~h~~~~~~~~~~~~~~~~~~~~~~  157 (473)
                      ..+.+.+.            ..+||+||++.+......  +.+++. .++ ++|+++|+....     .. ..   ...+
T Consensus        76 ~~l~~~~~------------~~~~Dvv~~~~~~~~~~~--~~~~~~-~~~~~~i~~~h~~~~~-----~~-~~---~~~~  131 (394)
T 3okp_A           76 HAMAEIIR------------EREIDNVWFGAAAPLALM--AGTAKQ-AGASKVIASTHGHEVG-----WS-ML---PGSR  131 (394)
T ss_dssp             HHHHHHHH------------HTTCSEEEESSCTTGGGG--HHHHHH-TTCSEEEEECCSTHHH-----HT-TS---HHHH
T ss_pred             HHHHHHHH------------hcCCCEEEECCcchHHHH--HHHHHh-cCCCcEEEEeccchhh-----hh-hc---chhh
Confidence            33333332            278999999886444322  334443 455 488899987321     11 11   2334


Q ss_pred             HHHHHHhhcCCEEEEcCHHHHHHHHHHhCC--ceEEeeCC-CCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcC
Q 011979          158 WIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGME  234 (473)
Q Consensus       158 ~~e~~~~~~ad~vi~vS~~~~~~l~~~~g~--~~~vi~n~-~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  234 (473)
                      .+.+.+.+.+|.++++|+.+++.+.+.++.  ++.+++|+ +.+.|.+.....+..++.+++                  
T Consensus       132 ~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~------------------  193 (394)
T 3okp_A          132 QSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLG------------------  193 (394)
T ss_dssp             HHHHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTT------------------
T ss_pred             HHHHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhcC------------------
Confidence            566777789999999999999999988866  48999999 456777756666777777765                  


Q ss_pred             CCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccC
Q 011979          235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY  314 (473)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (473)
                                        ++++++ .++|+|++.+.||++.+++|+..+.++                           .
T Consensus       194 ------------------~~~~~~-~i~~~G~~~~~Kg~~~li~a~~~l~~~---------------------------~  227 (394)
T 3okp_A          194 ------------------FTDTTP-VIACNSRLVPRKGQDSLIKAMPQVIAA---------------------------R  227 (394)
T ss_dssp             ------------------CCTTCC-EEEEESCSCGGGCHHHHHHHHHHHHHH---------------------------S
T ss_pred             ------------------CCcCce-EEEEEeccccccCHHHHHHHHHHHHhh---------------------------C
Confidence                              223333 899999999999999999999999873                           6


Q ss_pred             CCEEEEEEcCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCC-------CCCcHHHHHHHh
Q 011979          315 PRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-------LDLPMKVVDMFG  386 (473)
Q Consensus       315 ~~~~l~ivG~g~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~-------e~~p~kv~Eama  386 (473)
                      |+++|+|+|+|+..+.+++++  .++ ++|.|+|. ++.+++..+|+.||++|+   +|..       |++|++++|||+
T Consensus       228 ~~~~l~i~G~g~~~~~l~~~~--~~~~~~v~~~g~-~~~~~~~~~~~~ad~~v~---ps~~~~~~~~~e~~~~~~~Ea~a  301 (394)
T 3okp_A          228 PDAQLLIVGSGRYESTLRRLA--TDVSQNVKFLGR-LEYQDMINTLAAADIFAM---PARTRGGGLDVEGLGIVYLEAQA  301 (394)
T ss_dssp             TTCEEEEECCCTTHHHHHHHT--GGGGGGEEEEES-CCHHHHHHHHHHCSEEEE---CCCCBGGGTBCCSSCHHHHHHHH
T ss_pred             CCeEEEEEcCchHHHHHHHHH--hcccCeEEEcCC-CCHHHHHHHHHhCCEEEe---cCccccccccccccCcHHHHHHH
Confidence            899999999999998888888  555 79999998 999999999999999999   5665       999999999999


Q ss_pred             cCCcEEEeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcc-ccchHHHHHHHHHHH
Q 011979          387 CGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGL-SARWATEWEEHAKPL  463 (473)
Q Consensus       387 ~G~PvI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~w~~~~~~~~~~~  463 (473)
                      +|+|||+++.++..|++.++ +|++++  |+++++++|.+++++    ++.++++++++++... .|+|+...++. ..+
T Consensus       302 ~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~~-~~~  375 (394)
T 3okp_A          302 CGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLDD----PIRRAAMGAAGRAHVEAEWSWEIMGERL-TNI  375 (394)
T ss_dssp             TTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHTC----HHHHHHHHHHHHHHHHHHTBHHHHHHHH-HHH
T ss_pred             cCCCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhCCHHHHHHHH-HHH
Confidence            99999999999999999988 999997  899999999999995    9999999999998774 58998776664 444


Q ss_pred             HHHH
Q 011979          464 ITEV  467 (473)
Q Consensus       464 ~~~~  467 (473)
                      ++++
T Consensus       376 ~~~~  379 (394)
T 3okp_A          376 LQSE  379 (394)
T ss_dssp             HHSC
T ss_pred             HHHh
Confidence            4443

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=100.00  E-value=8.4e-38  Score=322.10  Aligned_cols=377  Identities=17%  Similarity=0.124  Sum_probs=268.0

Q ss_pred             CCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCCccc-----------------ccCCCEEEEEeecCCCCCCCCcc-h
Q 011979           14 DLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAI-----------------LEHPSIHIHTMTQWPTIPRGLPK-V   74 (473)
Q Consensus        14 ~~g~s~r-~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~-----------------~~~~~i~i~~~~~~~~~~~~~~~-~   74 (473)
                      ..||.++ +..++..|+++ ||+|+|+++.........                 ...+|+++++++........... .
T Consensus        16 ~~gG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~   94 (439)
T 3fro_A           16 KVGGLAEALTAISEALASL-GHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPG   94 (439)
T ss_dssp             CSSSHHHHHHHHHHHHHHT-TCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEEESGGGGCSSTTCSH
T ss_pred             ccCCHHHHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEecchhccccccccCC
Confidence            4566555 44567888887 999999997654432110                 04579999999841111111110 1


Q ss_pred             hHH-HHHHHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhh-c--CCCc
Q 011979           75 LKP-VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLS-L--GRRS  150 (473)
Q Consensus        75 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~-~--~~~~  150 (473)
                      ... ...+.........++..++.+..+||+||+|++   ....++.++++..++|+|+++|+......... .  ....
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~---~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~  171 (439)
T 3fro_A           95 WDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDW---HTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLS  171 (439)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESG---GGHHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCG
T ss_pred             cchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecch---hhhhhHHHHhhccCCCEEEEecccccccCchHHhCccccc
Confidence            111 111222222222233333323469999999984   33445666667788999999999852110000 0  0000


Q ss_pred             hH-HHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHh---CCceEEeeCC-CCCCcccC-----ChhHHHHHHHhhhhhcc
Q 011979          151 HF-VSIYRWIEKYYGKMANGCLCVTQAMQHELAQNW---GIKATVLYDQ-PPEFFHPT-----SLEEKHELFCRLNKILH  220 (473)
Q Consensus       151 ~~-~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~---g~~~~vi~n~-~~~~f~~~-----~~~~~~~l~~~l~~~~~  220 (473)
                      .. ......+++...+.||.++++|+.+++.....+   ..++.+++|+ +.+.|.|.     ..+.+.+++.+++    
T Consensus       172 ~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~----  247 (439)
T 3fro_A          172 ELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFG----  247 (439)
T ss_dssp             GGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHT----
T ss_pred             cccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcC----
Confidence            00 000014577778899999999999998855533   4458999999 44666654     2335566666665    


Q ss_pred             CCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeecc-CCCCHHHHHHHHHHhHHHHHhhhccCCCchh
Q 011979          221 QPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNE  299 (473)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~-~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~  299 (473)
                                                      ++++  .+++|+|++. +.||++.+++|+..+.+              
T Consensus       248 --------------------------------~~~~--~~i~~~G~~~~~~Kg~~~li~a~~~l~~--------------  279 (439)
T 3fro_A          248 --------------------------------MDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSS--------------  279 (439)
T ss_dssp             --------------------------------CCSC--EEEEEECCSSCTTBCHHHHHHHHHHHHT--------------
T ss_pred             --------------------------------CCCC--cEEEEEcccccccccHHHHHHHHHHHHh--------------
Confidence                                            2223  4999999999 99999999999999876              


Q ss_pred             hHHHhhhccCccccC--CCEEEEEEcCCCCh--HHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCC
Q 011979          300 EVFLKEISDGKQYLY--PRLLFIITGKGPDK--ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGL  375 (473)
Q Consensus       300 ~~~~~~~~~~~~~~~--~~~~l~ivG~g~~~--~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e  375 (473)
                                   ..  ++++|+|+|+|+..  +.+++++++++ +.+.|.|. ++.+++..+|+.||++|+   ||..|
T Consensus       280 -------------~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g~-~~~~~~~~~~~~adv~v~---ps~~e  341 (439)
T 3fro_A          280 -------------KKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEM-LSREFVRELYGSVDFVII---PSYFE  341 (439)
T ss_dssp             -------------SGGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECSC-CCHHHHHHHHTTCSEEEE---CBSCC
T ss_pred             -------------cccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcCC-CCHHHHHHHHHHCCEEEe---CCCCC
Confidence                         23  78999999999877  88999999998 67777776 999999999999999999   67779


Q ss_pred             CCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchH
Q 011979          376 DLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWA  453 (473)
Q Consensus       376 ~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~  453 (473)
                      ++|++++||||||+|||+++.++..|++.++ +|++++  |+++++++|.++++.   |++.+++|++++++..++++|+
T Consensus       342 ~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll~~---~~~~~~~~~~~~~~~~~~~s~~  417 (439)
T 3fro_A          342 PFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKALEL---SRSDLSKFRENCKKRAMSFSWE  417 (439)
T ss_dssp             SSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHHHH---TTTTTHHHHHHHHHHHHTSCHH
T ss_pred             CccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEeCCCCHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHhhCcHH
Confidence            9999999999999999999999999999877 999997  799999999999983   3788999999999988889998


Q ss_pred             HHHHHHHHHHHHHHhh
Q 011979          454 TEWEEHAKPLITEVIS  469 (473)
Q Consensus       454 ~~~~~~~~~~~~~~~~  469 (473)
                      ...+++. .+++++++
T Consensus       418 ~~~~~~~-~~~~~~~~  432 (439)
T 3fro_A          418 KSAERYV-KAYTGSID  432 (439)
T ss_dssp             HHHHHHH-HHHHTCSC
T ss_pred             HHHHHHH-HHHHHHHH
Confidence            8877744 45555543

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*

Probab=100.00  E-value=1.9e-36  Score=320.55  Aligned_cols=376  Identities=14%  Similarity=0.082  Sum_probs=265.5

Q ss_pred             CCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCC-cc----cc---cCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHH
Q 011979           15 LGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPH-AA----IL---EHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPL   85 (473)
Q Consensus        15 ~g~s~r~-~~~a~~L~~~~g~eV~vi~~~~~~~~-~~----~~---~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (473)
                      .||.++. ..++..|++. ||+|+|+|....... +.    ..   ..+|+++++++..+............+..   ..
T Consensus        32 ~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~~~~~---~~  107 (499)
T 2r60_A           32 FGGQLVYVKEVSLALAEM-GVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIPFGGDKFLPKEELWPYLHE---YV  107 (499)
T ss_dssp             BSHHHHHHHHHHHHHHHT-TCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEECCSCSSCCCGGGCGGGHHH---HH
T ss_pred             CCCeeehHHHHHHHHHhc-CCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEecCCCcCCcCHHHHHHHHHH---HH
Confidence            3544444 3456777776 999999997643211 11    11   14699999998322111111111111111   11


Q ss_pred             HHHHHHHHHHhhhh-CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCC--C-chHHH-----HH
Q 011979           86 IQFFMLLWFLCVKI-ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR--R-SHFVS-----IY  156 (473)
Q Consensus        86 ~~~~~~~~~~~~~~-~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~--~-~~~~~-----~~  156 (473)
                      ..    +..++.+. .+||+||+|.+   ....++.++++..++|+|++.|+............  . ..+.+     ..
T Consensus       108 ~~----l~~~l~~~~~~~Divh~~~~---~~~~~~~~~~~~~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (499)
T 2r60_A          108 NK----IINFYREEGKFPQVVTTHYG---DGGLAGVLLKNIKGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRR  180 (499)
T ss_dssp             HH----HHHHHHHHTCCCSEEEEEHH---HHHHHHHHHHHHHCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHH
T ss_pred             HH----HHHHHHhcCCCCCEEEEcCC---cchHHHHHHHHhcCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHH
Confidence            11    11122222 48999999983   33434666677778999999999853222110000  0 11111     23


Q ss_pred             HHHHHHHhhcCCEEEEcCHHHHHHHHHH--hC-C-------ceEEeeCC-CCCCcccCC-hhHHHHHHHhhhhhccCCCC
Q 011979          157 RWIEKYYGKMANGCLCVTQAMQHELAQN--WG-I-------KATVLYDQ-PPEFFHPTS-LEEKHELFCRLNKILHQPLG  224 (473)
Q Consensus       157 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~--~g-~-------~~~vi~n~-~~~~f~~~~-~~~~~~l~~~l~~~~~~~~~  224 (473)
                      .++++.+.+.+|.++++|+.+++.+.+.  +| .       ++.+++|+ +.+.|.+.. .+.+.+++.+++...     
T Consensus       181 ~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~-----  255 (499)
T 2r60_A          181 IIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDL-----  255 (499)
T ss_dssp             HHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHS-----
T ss_pred             HHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhcCccchhhhHHHHHHHhcccc-----
Confidence            3567888899999999999999998887  67 4       48999999 446676653 234455666654100     


Q ss_pred             cccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHh
Q 011979          225 VQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLK  304 (473)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~  304 (473)
                                                ...+++.+ +++|+|++.+.||++.+++|+..+.++                  
T Consensus       256 --------------------------~~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~~------------------  290 (499)
T 2r60_A          256 --------------------------GSERMELP-AIIASSRLDQKKNHYGLVEAYVQNKEL------------------  290 (499)
T ss_dssp             --------------------------CGGGTTSC-EEEECSCCCGGGCHHHHHHHHHTCHHH------------------
T ss_pred             --------------------------cccCCCCc-EEEEeecCccccCHHHHHHHHHHHHHh------------------
Confidence                                      00122334 899999999999999999999998763                  


Q ss_pred             hhccCccccCC-CEEEEEEcC--CC------C-------hHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcC----c
Q 011979          305 EISDGKQYLYP-RLLFIITGK--GP------D-------KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSA----D  363 (473)
Q Consensus       305 ~~~~~~~~~~~-~~~l~ivG~--g~------~-------~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~a----d  363 (473)
                               .+ .++|+|+|+  |+      .       .++++++++++++ ++|.|+|. ++.+++..+|+.|    |
T Consensus       291 ---------~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~-v~~~~~~~~~~~a~~~~d  360 (499)
T 2r60_A          291 ---------QDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPL-NSQQELAGCYAYLASKGS  360 (499)
T ss_dssp             ---------HHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEEC-CSHHHHHHHHHHHHHTTC
T ss_pred             ---------CCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCC-CCHHHHHHHHHhcCcCCC
Confidence                     23 368999998  44      1       6789999999999 79999998 9999999999999    9


Q ss_pred             EEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 011979          364 LGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRN  441 (473)
Q Consensus       364 i~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~  441 (473)
                      ++|+   ||..|+||++++||||||+|||+++.++..|++.++.+|++++  |+++++++|.+++++    ++.+++|++
T Consensus       361 v~v~---pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~----~~~~~~~~~  433 (499)
T 2r60_A          361 VFAL---TSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFES----EETWSAYQE  433 (499)
T ss_dssp             EEEE---CCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHSC----HHHHHHHHH
T ss_pred             EEEE---CcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHhC----HHHHHHHHH
Confidence            9999   6888999999999999999999999999999999999999996  799999999999985    899999999


Q ss_pred             HHHHhccc-cchHHHHHHHHHHHHHHHhh
Q 011979          442 GTLEMGLS-ARWATEWEEHAKPLITEVIS  469 (473)
Q Consensus       442 ~~~~~~~~-~~w~~~~~~~~~~~~~~~~~  469 (473)
                      ++++...+ |+|+...+++ ..++++++.
T Consensus       434 ~a~~~~~~~fs~~~~~~~~-~~~y~~~~~  461 (499)
T 2r60_A          434 KGKQRVEERYTWQETARGY-LEVIQEIAD  461 (499)
T ss_dssp             HHHHHHHHHSBHHHHHHHH-HHHHHHHHH
T ss_pred             HHHHHHHHhCCHHHHHHHH-HHHHHHHHh
Confidence            99988855 9998877764 344454443

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*

Probab=100.00  E-value=1.1e-35  Score=304.58  Aligned_cols=361  Identities=15%  Similarity=0.182  Sum_probs=259.9

Q ss_pred             EEEEEecCCCCChhHH-HHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHH
Q 011979            7 ACVVVLGDLGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPL   85 (473)
Q Consensus         7 ~~i~~~~~~g~s~r~~-~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (473)
                      ++....+..||.++.. .++..|+++ ||+|+|++.......  ....+++.++.++....+.  .......+....++ 
T Consensus        18 ~~~~~~p~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~--~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~l-   91 (394)
T 2jjm_A           18 IGITCYPSVGGSGVVGTELGKQLAER-GHEIHFITSGLPFRL--NKVYPNIYFHEVTVNQYSV--FQYPPYDLALASKM-   91 (394)
T ss_dssp             EEEECCC--CHHHHHHHHHHHHHHHT-TCEEEEECSSCC------CCCTTEEEECCCCC------CCSCCHHHHHHHHH-
T ss_pred             eehhcCCCCCCHHHHHHHHHHHHHhC-CCEEEEEeCCCCCcc--cccCCceEEEecccccccc--cccccccHHHHHHH-
Confidence            4444455667655554 456777776 999999997543211  1235678877766221111  11111111111111 


Q ss_pred             HHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhC--CCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHH
Q 011979           86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLR--RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY  163 (473)
Q Consensus        86 ~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~--~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~  163 (473)
                             ..++ +..+||+||++.+.  +....+.++++..  ++|+|++.|+......    +...    .++.+++..
T Consensus        92 -------~~~l-~~~~~Dvv~~~~~~--~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~~~----~~~~~~~~~  153 (394)
T 2jjm_A           92 -------AEVA-QRENLDILHVHYAI--PHAICAYLAKQMIGERIKIVTTLHGTDITVL----GSDP----SLNNLIRFG  153 (394)
T ss_dssp             -------HHHH-HHHTCSEEEECSST--THHHHHHHHHHHTTTCSEEEEECCHHHHHTT----TTCT----TTHHHHHHH
T ss_pred             -------HHHH-HHcCCCEEEEcchh--HHHHHHHHHHHhhcCCCCEEEEEecCccccc----CCCH----HHHHHHHHH
Confidence                   1112 23789999999753  2333344455443  5999999999743111    1111    123456677


Q ss_pred             hhcCCEEEEcCHHHHHHHHHHhCC--ceEEeeCCC-CCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccc
Q 011979          164 GKMANGCLCVTQAMQHELAQNWGI--KATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE  240 (473)
Q Consensus       164 ~~~ad~vi~vS~~~~~~l~~~~g~--~~~vi~n~~-~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  240 (473)
                      .+.+|.++++|+.+++.+.+.++.  ++.+++|+. .+.|.+..   +..++.+++                        
T Consensus       154 ~~~ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~---~~~~~~~~~------------------------  206 (394)
T 2jjm_A          154 IEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRD---MTQLKKEYG------------------------  206 (394)
T ss_dssp             HHHSSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCCCC---CHHHHHHTT------------------------
T ss_pred             HhhCCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCCcc---hHHHHHHcC------------------------
Confidence            788999999999999999887765  589999994 45565542   233444433                        


Q ss_pred             hhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEE
Q 011979          241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI  320 (473)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  320 (473)
                                  ++++.+ .++|+|++.+.||++.+++|+..+.+                            .++++|+
T Consensus       207 ------------~~~~~~-~i~~~G~~~~~Kg~~~li~a~~~l~~----------------------------~~~~~l~  245 (394)
T 2jjm_A          207 ------------ISESEK-ILIHISNFRKVKRVQDVVQAFAKIVT----------------------------EVDAKLL  245 (394)
T ss_dssp             ------------CC---C-EEEEECCCCGGGTHHHHHHHHHHHHH----------------------------SSCCEEE
T ss_pred             ------------CCCCCe-EEEEeeccccccCHHHHHHHHHHHHh----------------------------hCCCEEE
Confidence                        122233 89999999999999999999999977                            2568999


Q ss_pred             EEcCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCcc
Q 011979          321 ITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI  399 (473)
Q Consensus       321 ivG~g~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~  399 (473)
                      |+|+|+..+.+++.++++++ ++|.|+|+   .+++..+|+.||++|+   ||..|++|++++|||+||+|||+++.++.
T Consensus       246 i~G~g~~~~~l~~~~~~~~l~~~v~~~g~---~~~~~~~~~~adv~v~---ps~~e~~~~~~~EAma~G~PvI~~~~~~~  319 (394)
T 2jjm_A          246 LVGDGPEFCTILQLVKNLHIEDRVLFLGK---QDNVAELLAMSDLMLL---LSEKESFGLVLLEAMACGVPCIGTRVGGI  319 (394)
T ss_dssp             EECCCTTHHHHHHHHHTTTCGGGBCCCBS---CSCTHHHHHTCSEEEE---CCSCCSCCHHHHHHHHTTCCEEEECCTTS
T ss_pred             EECCchHHHHHHHHHHHcCCCCeEEEeCc---hhhHHHHHHhCCEEEe---ccccCCCchHHHHHHhcCCCEEEecCCCh
Confidence            99999999999999999998 89999997   7999999999999999   67789999999999999999999999999


Q ss_pred             ccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHHHHHHHHHhhc
Q 011979          400 EELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAKPLITEVISQ  470 (473)
Q Consensus       400 ~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~  470 (473)
                      .|++.++.+|++++  |+++++++|.+++++    ++.+++|++++++.. +.++|+...++ +..++++++++
T Consensus       320 ~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~~  388 (394)
T 2jjm_A          320 PEVIQHGDTGYLCEVGDTTGVADQAIQLLKD----EELHRNMGERARESVYEQFRSEKIVSQ-YETIYYDVLRD  388 (394)
T ss_dssp             TTTCCBTTTEEEECTTCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHHSCHHHHHHH-HHHHHHHTC--
T ss_pred             HHHhhcCCceEEeCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHhh
Confidence            99999999999997  799999999999995    899999999999987 78999887776 44555665543

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*

Probab=100.00  E-value=4.5e-35  Score=299.44  Aligned_cols=357  Identities=14%  Similarity=0.127  Sum_probs=248.8

Q ss_pred             CCCCeEEEEEecC---CCCC-hhHHHHHHHHHhhCCCcEEEEecCCCCC-CcccccCCCEEEEEeecCCCCCCCCcchhH
Q 011979            2 GRRGRACVVVLGD---LGRS-PRMQYQALSLARQMSLEVDVVAYGGSKP-HAAILEHPSIHIHTMTQWPTIPRGLPKVLK   76 (473)
Q Consensus         2 ~~~~~~~i~~~~~---~g~s-~r~~~~a~~L~~~~g~eV~vi~~~~~~~-~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~   76 (473)
                      .+|++++++....   .||. .++...+..|.++ ||+|++++...... .+......+ +++.++.... .........
T Consensus        18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~   94 (406)
T 2gek_A           18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA-GHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYNGS-VARLRFGPA   94 (406)
T ss_dssp             ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT-TCEEEEEESCCTTSCCCTTEEECC-CCC-------------CCHH
T ss_pred             CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCccccCCcccccCC-cEEeccccCC-cccccccHH
Confidence            4456666665321   2443 2344566777776 99999999765432 111111222 3333331000 000000000


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHH
Q 011979           77 PVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIY  156 (473)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~  156 (473)
                      ....+.           .++ +..+||+||++.+.....   +.++++..++|+|+++|+...        .......+.
T Consensus        95 ~~~~l~-----------~~l-~~~~~Dii~~~~~~~~~~---~~~~~~~~~~~~i~~~h~~~~--------~~~~~~~~~  151 (406)
T 2gek_A           95 THRKVK-----------KWI-AEGDFDVLHIHEPNAPSL---SMLALQAAEGPIVATFHTSTT--------KSLTLSVFQ  151 (406)
T ss_dssp             HHHHHH-----------HHH-HHHCCSEEEEECCCSSSH---HHHHHHHEESSEEEEECCCCC--------SHHHHHHHH
T ss_pred             HHHHHH-----------HHH-HhcCCCEEEECCccchHH---HHHHHHhcCCCEEEEEcCcch--------hhhhHHHHH
Confidence            011111           122 226899999998765443   334455567999999999731        111122333


Q ss_pred             HHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCc-eEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcC
Q 011979          157 RWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGME  234 (473)
Q Consensus       157 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g~~-~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  234 (473)
                      ++++ ...+.+|.++++|+.+++.+.+.++.+ + +++|+.+ +.|.+....                            
T Consensus       152 ~~~~-~~~~~~d~ii~~s~~~~~~~~~~~~~~~~-vi~~~v~~~~~~~~~~~----------------------------  201 (406)
T 2gek_A          152 GILR-PYHEKIIGRIAVSDLARRWQMEALGSDAV-EIPNGVDVASFADAPLL----------------------------  201 (406)
T ss_dssp             STTH-HHHTTCSEEEESSHHHHHHHHHHHSSCEE-ECCCCBCHHHHHTCCCC----------------------------
T ss_pred             HHHH-HHHhhCCEEEECCHHHHHHHHHhcCCCcE-EecCCCChhhcCCCchh----------------------------
Confidence            3444 667889999999999999998877766 6 8888743 333222100                            


Q ss_pred             CCCccchhhhcccccccccCCCCCeEEEEEeec-cCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCcccc
Q 011979          235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL  313 (473)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~-~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (473)
                                      ...+.+++ .++|+|++ .+.||++.+++|+..+.+                           .
T Consensus       202 ----------------~~~~~~~~-~i~~~G~~~~~~Kg~~~li~a~~~l~~---------------------------~  237 (406)
T 2gek_A          202 ----------------DGYPREGR-TVLFLGRYDEPRKGMAVLLAALPKLVA---------------------------R  237 (406)
T ss_dssp             ----------------TTCSCSSC-EEEEESCTTSGGGCHHHHHHHHHHHHT---------------------------T
T ss_pred             ----------------hhccCCCe-EEEEEeeeCccccCHHHHHHHHHHHHH---------------------------H
Confidence                            01222333 89999999 999999999999999876                           3


Q ss_pred             CCCEEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCC-CCCCCcHHHHHHHhcCCcEE
Q 011979          314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVC  392 (473)
Q Consensus       314 ~~~~~l~ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s-~~e~~p~kv~Eama~G~PvI  392 (473)
                      .|+++|+|+|+|+. +.+++.++++ .++|.|+|. ++.+++..+|+.||++|+   +| ..|++|++++|||+||+|||
T Consensus       238 ~~~~~l~i~G~~~~-~~l~~~~~~~-~~~v~~~g~-~~~~~~~~~~~~adv~v~---ps~~~e~~~~~~~Ea~a~G~PvI  311 (406)
T 2gek_A          238 FPDVEILIVGRGDE-DELREQAGDL-AGHLRFLGQ-VDDATKASAMRSADVYCA---PHLGGESFGIVLVEAMAAGTAVV  311 (406)
T ss_dssp             STTCEEEEESCSCH-HHHHHHTGGG-GGGEEECCS-CCHHHHHHHHHHSSEEEE---CCCSCCSSCHHHHHHHHHTCEEE
T ss_pred             CCCeEEEEEcCCcH-HHHHHHHHhc-cCcEEEEec-CCHHHHHHHHHHCCEEEe---cCCCCCCCchHHHHHHHcCCCEE
Confidence            68999999999987 8888888876 479999998 999999999999999999   56 48999999999999999999


Q ss_pred             EeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhh
Q 011979          393 AVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVIS  469 (473)
Q Consensus       393 ~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~  469 (473)
                      +++.++..|++.++.+|++++  |+++++++|.+++++    ++.++++++++++..+.++|+...++ +..++++++.
T Consensus       312 ~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~----~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~  385 (406)
T 2gek_A          312 ASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILED----DQLRAGYVARASERVHRYDWSVVSAQ-IMRVYETVSG  385 (406)
T ss_dssp             ECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHGGGGBHHHHHHH-HHHHHHHHCC
T ss_pred             EecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHh
Confidence            999999999999999999994  799999999999995    89999999999998888999877766 4445555543

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*

Probab=100.00  E-value=8.2e-36  Score=301.59  Aligned_cols=346  Identities=13%  Similarity=0.069  Sum_probs=242.7

Q ss_pred             CCeEEEEEe-cCCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHH
Q 011979            4 RGRACVVVL-GDLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLL   81 (473)
Q Consensus         4 ~~~~~i~~~-~~~g~s~r-~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~   81 (473)
                      ||++++... ...||..+ +...+..|+++ ||+|+|++......     ..++++++.++.  .   ..........  
T Consensus         1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~-----~~~~~~v~~~~~--~---~~~~~~~~~~--   67 (374)
T 2iw1_A            1 MIVAFCLYKYFPFGGLQRDFMRIASTVAAR-GHHVRVYTQSWEGD-----CPKAFELIQVPV--K---SHTNHGRNAE--   67 (374)
T ss_dssp             -CEEEECSEECTTCHHHHHHHHHHHHHHHT-TCCEEEEESEECSC-----CCTTCEEEECCC--C---CSSHHHHHHH--
T ss_pred             CeEEEEEeecCCCcchhhHHHHHHHHHHhC-CCeEEEEecCCCCC-----CCCCcEEEEEcc--C---cccchhhHHH--
Confidence            344443322 23555444 44566778886 99999999653221     124788888872  1   1111111111  


Q ss_pred             HHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHH
Q 011979           82 LKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEK  161 (473)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~  161 (473)
                        ....    +..++ +..+||+||++++.....   +.+......++.+++.|+...        ......+.+.++++
T Consensus        68 --~~~~----l~~~i-~~~~~Dvv~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~  129 (374)
T 2iw1_A           68 --YYAW----VQNHL-KEHPADRVVGFNKMPGLD---VYFAADVCYAEKVAQEKGFLY--------RLTSRYRHYAAFER  129 (374)
T ss_dssp             --HHHH----HHHHH-HHSCCSEEEESSCCTTCS---EEECCSCCHHHHHHHHCCHHH--------HTSHHHHHHHHHHH
T ss_pred             --HHHH----HHHHH-hccCCCEEEEecCCCCce---eeeccccccceeeeecccchh--------hhcHHHHHHHHHHH
Confidence              1111    11222 237899999987432110   001111122233333444321        11112234456666


Q ss_pred             HHhh--cCCEEEEcCHHHHHHHHHHhCCc---eEEeeCCCC-CCcccCC-hhHHHHHHHhhhhhccCCCCcccccCCCcC
Q 011979          162 YYGK--MANGCLCVTQAMQHELAQNWGIK---ATVLYDQPP-EFFHPTS-LEEKHELFCRLNKILHQPLGVQDCVSNGME  234 (473)
Q Consensus       162 ~~~~--~ad~vi~vS~~~~~~l~~~~g~~---~~vi~n~~~-~~f~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  234 (473)
                      ...+  .+|.++++|+.+++.+.+.+|.+   +.+++|+.+ +.|.+.. ...+..++.+++                  
T Consensus       130 ~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~------------------  191 (374)
T 2iw1_A          130 ATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNG------------------  191 (374)
T ss_dssp             HHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTT------------------
T ss_pred             HHhhccCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhC------------------
Confidence            6654  69999999999999999888763   889999944 5565542 234555666654                  


Q ss_pred             CCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccC
Q 011979          235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY  314 (473)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (473)
                                        +++++ .+++|+|++.+.||++.+++|+..+.++                          ..
T Consensus       192 ------------------~~~~~-~~i~~~G~~~~~K~~~~li~a~~~l~~~--------------------------~~  226 (374)
T 2iw1_A          192 ------------------IKEQQ-NLLLQVGSDFGRKGVDRSIEALASLPES--------------------------LR  226 (374)
T ss_dssp             ------------------CCTTC-EEEEEECSCTTTTTHHHHHHHHHTSCHH--------------------------HH
T ss_pred             ------------------CCCCC-eEEEEeccchhhcCHHHHHHHHHHhHhc--------------------------cC
Confidence                              22223 3899999999999999999999998652                          13


Q ss_pred             CCEEEEEEcCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEE
Q 011979          315 PRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA  393 (473)
Q Consensus       315 ~~~~l~ivG~g~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~  393 (473)
                      ++++|+|+|+|+. +.++++++++++ ++|.|+|+   .+++..+|+.||++|+   ||..|++|++++|||+||+|||+
T Consensus       227 ~~~~l~i~G~g~~-~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~ad~~v~---ps~~e~~~~~~~Ea~a~G~Pvi~  299 (374)
T 2iw1_A          227 HNTLLFVVGQDKP-RKFEALAEKLGVRSNVHFFSG---RNDVSELMAAADLLLH---PAYQEAAGIVLLEAITAGLPVLT  299 (374)
T ss_dssp             HTEEEEEESSSCC-HHHHHHHHHHTCGGGEEEESC---CSCHHHHHHHCSEEEE---CCSCCSSCHHHHHHHHHTCCEEE
T ss_pred             CceEEEEEcCCCH-HHHHHHHHHcCCCCcEEECCC---cccHHHHHHhcCEEEe---ccccCCcccHHHHHHHCCCCEEE
Confidence            6899999999874 779999999998 89999997   7899999999999999   67789999999999999999999


Q ss_pred             eccCccccceecCCceEEeC---CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHH
Q 011979          394 VSYSCIEELVKVDKNGLLFS---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWAT  454 (473)
Q Consensus       394 ~~~~~~~e~i~~~~~G~~~~---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~  454 (473)
                      ++.++..+++.++.+|++++   |+++++++|.+++++    ++.++++++++++...+++|..
T Consensus       300 ~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~----~~~~~~~~~~~~~~~~~~~~~~  359 (374)
T 2iw1_A          300 TAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ----SPLRMAWAENARHYADTQDLYS  359 (374)
T ss_dssp             ETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHSCCSC
T ss_pred             ecCCCchhhhccCCceEEeCCCCCHHHHHHHHHHHHcC----hHHHHHHHHHHHHHHHHhhHHH
Confidence            99999999999999999985   799999999999995    8999999999999886666654

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*

Probab=100.00  E-value=1.6e-35  Score=305.52  Aligned_cols=362  Identities=14%  Similarity=0.147  Sum_probs=244.1

Q ss_pred             CCCCCeEEEEEecCCCCChhHHH-HHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHH
Q 011979            1 MGRRGRACVVVLGDLGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVL   79 (473)
Q Consensus         1 m~~~~~~~i~~~~~~g~s~r~~~-~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~   79 (473)
                      |.+||++++......||..+... ++..|.+. ||+|++++............  ++.. .+.  .........  ....
T Consensus        38 ~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~-G~~v~v~~~~~~~~~~~~~~--~~~~-~~~--~~~~~~~~~--~~~~  109 (416)
T 2x6q_A           38 LKGRSFVHVNSTSFGGGVAEILHSLVPLLRSI-GIEARWFVIEGPTEFFNVTK--TFHN-ALQ--GNESLKLTE--EMKE  109 (416)
T ss_dssp             TTTCEEEEEESCSSSSTHHHHHHHHHHHHHHT-TCEEEEEECCCCHHHHHHHH--HHHH-HHT--TCCSCCCCH--HHHH
T ss_pred             hhccEEEEEeCCCCCCCHHHHHHHHHHHHHhC-CCeEEEEEccCCcchhhhhc--ccce-eec--ccccccccH--HHHH
Confidence            55566555554444566666654 56777776 99999998654321100000  0000 000  000011111  1111


Q ss_pred             HHHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHH
Q 011979           80 LLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWI  159 (473)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~  159 (473)
                      ......+    .+...+ +..+||+||+|++......   .+++  +++|+|++.|+...       ...   ....+++
T Consensus       110 ~~~~~~~----~~~~~l-~~~~~Dvv~~~~~~~~~~~---~~~~--~~~p~v~~~h~~~~-------~~~---~~~~~~~  169 (416)
T 2x6q_A          110 LYLNVNR----ENSKFI-DLSSFDYVLVHDPQPAALI---EFYE--KKSPWLWRCHIDLS-------SPN---REFWEFL  169 (416)
T ss_dssp             HHHHHHH----HHHHSS-CGGGSSEEEEESSTTGGGG---GGSC--CCSCEEEECCSCCS-------SCC---HHHHHHH
T ss_pred             HHHHHHH----HHHHHH-hhcCCCEEEEeccchhhHH---HHHH--hcCCEEEEEccccC-------Ccc---HHHHHHH
Confidence            1111111    111222 3368999999996543221   1222  34899999998731       111   1223344


Q ss_pred             HHHHhhcCCEEE-EcCHHHHHHHHHHhCCceEEeeCCCC-CCccc--CChhHHHHHHHhhhhhccCCCCcccccCCCcCC
Q 011979          160 EKYYGKMANGCL-CVTQAMQHELAQNWGIKATVLYDQPP-EFFHP--TSLEEKHELFCRLNKILHQPLGVQDCVSNGMEG  235 (473)
Q Consensus       160 e~~~~~~ad~vi-~vS~~~~~~l~~~~g~~~~vi~n~~~-~~f~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  235 (473)
                      ++.+. .+|.++ ++|+..++.+.   ..++.+++|+.+ ..|.+  .+.+.+..++.+++                   
T Consensus       170 ~~~~~-~~~~~i~~~s~~~~~~~~---~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~-------------------  226 (416)
T 2x6q_A          170 RRFVE-KYDRYIFHLPEYVQPELD---RNKAVIMPPSIDPLSEKNVELKQTEILRILERFD-------------------  226 (416)
T ss_dssp             HHHHT-TSSEEEESSGGGSCTTSC---TTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTT-------------------
T ss_pred             HHHHH-hCCEEEEechHHHHhhCC---ccceEEeCCCCChhhhcccccChhhHHHHHHHhC-------------------
Confidence            55544 456554 67766554221   145889999943 44433  23445566666654                   


Q ss_pred             CCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCC
Q 011979          236 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP  315 (473)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (473)
                                       ++++++ +++|+|++.+.||++.+++|+..+.++                           .|
T Consensus       227 -----------------~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~~---------------------------~~  261 (416)
T 2x6q_A          227 -----------------VDPEKP-IITQVSRFDPWKGIFDVIEIYRKVKEK---------------------------IP  261 (416)
T ss_dssp             -----------------CCTTSC-EEEEECCCCTTSCHHHHHHHHHHHHHH---------------------------CT
T ss_pred             -----------------CCCCCc-EEEEEeccccccCHHHHHHHHHHHHHh---------------------------CC
Confidence                             233344 899999999999999999999999873                           68


Q ss_pred             CEEEEEEcCCCC-----hHHHHHHHHHcCC-CcEEEecC--CCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhc
Q 011979          316 RLLFIITGKGPD-----KESYEEKIRRLRL-KRVAFRTM--WLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC  387 (473)
Q Consensus       316 ~~~l~ivG~g~~-----~~~l~~~~~~~~l-~~V~~~g~--~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~  387 (473)
                      +++|+|+|+|+.     .+.++++++++++ ++|.|+|+  .++.+++..+|+.||++|+   ||..|+||++++|||||
T Consensus       262 ~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~---ps~~E~~~~~~lEAma~  338 (416)
T 2x6q_A          262 GVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQ---MSIREGFGLTVTEAMWK  338 (416)
T ss_dssp             TCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEE---CCSSCSSCHHHHHHHHT
T ss_pred             CeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEE---CCCcCCCccHHHHHHHc
Confidence            999999999975     4668889999998 79999995  1346799999999999999   68889999999999999


Q ss_pred             CCcEEEeccCccccceecCCceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHHHHHHHH
Q 011979          388 GLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAKPLITE  466 (473)
Q Consensus       388 G~PvI~~~~~~~~e~i~~~~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~  466 (473)
                      |+|||+++.++..|++.++.+|++++|+++++++|.+++++    ++.+++|++++++.. +.|+|+...+++. .++++
T Consensus       339 G~PvI~~~~~g~~e~i~~~~~g~l~~d~~~la~~i~~ll~~----~~~~~~~~~~a~~~~~~~fs~~~~~~~~~-~~~~~  413 (416)
T 2x6q_A          339 GKPVIGRAVGGIKFQIVDGETGFLVRDANEAVEVVLYLLKH----PEVSKEMGAKAKERVRKNFIITKHMERYL-DILNS  413 (416)
T ss_dssp             TCCEEEESCHHHHHHCCBTTTEEEESSHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHHTBHHHHHHHHH-HHHHT
T ss_pred             CCCEEEccCCCChhheecCCCeEEECCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHcCHHHHHHHHH-HHHHH
Confidence            99999999999999999999999999999999999999995    899999999999877 4799987776643 34443

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A

Probab=100.00  E-value=3.2e-34  Score=301.79  Aligned_cols=289  Identities=15%  Similarity=0.134  Sum_probs=218.0

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHH-hhCCCeEEEEecCchhhhh-hh-hc---C-CCchH------HHHHHHHHHHHhhc
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLL-SL-SL---G-RRSHF------VSIYRWIEKYYGKM  166 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~-~~~~~~~i~~~h~~~~~~~-~~-~~---~-~~~~~------~~~~~~~e~~~~~~  166 (473)
                      .+||+||+|++..   ..++.+++ +..++|+|+++|+.++... .. ..   + ....+      .....++++...+.
T Consensus       128 ~~~Divh~~~~~~---~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (485)
T 2qzs_A          128 WRPDVVHAHDWHA---GLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYY  204 (485)
T ss_dssp             CCCSEEEEETGGG---TTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHH
T ss_pred             CCCCEEEeeccch---hHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHh
Confidence            5899999998432   22344444 5678999999999742110 00 00   0 00000      00011456677788


Q ss_pred             CCEEEEcCHHHHHHHHHH-hC-------------CceEEeeCCC-CCCcccCCh----------------hHHHHHHHhh
Q 011979          167 ANGCLCVTQAMQHELAQN-WG-------------IKATVLYDQP-PEFFHPTSL----------------EEKHELFCRL  215 (473)
Q Consensus       167 ad~vi~vS~~~~~~l~~~-~g-------------~~~~vi~n~~-~~~f~~~~~----------------~~~~~l~~~l  215 (473)
                      +|.++++|+.+++.+.+. +|             .++.+++|+. .+.|.+...                ..+..++.++
T Consensus       205 ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  284 (485)
T 2qzs_A          205 ADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAM  284 (485)
T ss_dssp             CSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHH
T ss_pred             cCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHc
Confidence            999999999999988754 44             5689999994 466665421                1245566665


Q ss_pred             hhhccCCCCcccccCCCcCCCCccchhhhcccccccccCC--CCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhcc
Q 011979          216 NKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP--NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE  293 (473)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~  293 (473)
                      +                                    +++  +.+ +++|+|++.+.||++.+++|+..+.+        
T Consensus       285 ~------------------------------------~~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~--------  319 (485)
T 2qzs_A          285 G------------------------------------LKVDDKVP-LFAVVSRLTSQKGLDLVLEALPGLLE--------  319 (485)
T ss_dssp             T------------------------------------CCCCTTSC-EEEEEEEESGGGCHHHHHHHHHHHHH--------
T ss_pred             C------------------------------------CCCCCCCe-EEEEeccCccccCHHHHHHHHHHHhh--------
Confidence            5                                    122  233 89999999999999999999999876        


Q ss_pred             CCCchhhHHHhhhccCccccCCCEEEEEEcCCC--ChHHHHHHHHHcCCCcEE-EecCCCCcccHHHHHhcCcEEEEecc
Q 011979          294 DDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVA-FRTMWLSAEDYPLLLGSADLGVCLHT  370 (473)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~--~~~~l~~~~~~~~l~~V~-~~g~~v~~~~i~~~l~~adi~v~~~~  370 (473)
                                           ++++|+|+|+|+  ..+.+++++++++ ++|. |.|.  +.+++..+|+.||++|+   
T Consensus       320 ---------------------~~~~l~ivG~g~~~~~~~l~~~~~~~~-~~v~~~~g~--~~~~~~~~~~~adv~v~---  372 (485)
T 2qzs_A          320 ---------------------QGGQLALLGAGDPVLQEGFLAAAAEYP-GQVGVQIGY--HEAFSHRIMGGADVILV---  372 (485)
T ss_dssp             ---------------------TTCEEEEEEEECHHHHHHHHHHHHHST-TTEEEEESC--CHHHHHHHHHHCSEEEE---
T ss_pred             ---------------------CCcEEEEEeCCchHHHHHHHHHHHhCC-CcEEEeCCC--CHHHHHHHHHhCCEEEE---
Confidence                                 479999999996  4678888898887 7897 5654  67777999999999999   


Q ss_pred             CCCCCCCcHHHHHHHhcCCcEEEeccCccccceecC---------CceEEeC--CHHHHHHHHHHHHh--CCCCCHHHHH
Q 011979          371 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD---------KNGLLFS--SSSELADQLLMLFK--GFPDDSDVLK  437 (473)
Q Consensus       371 ~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~---------~~G~~~~--~~~~la~~i~~l~~--~~~~~~~~~~  437 (473)
                      ||..|+||++++||||||+|||+++.+|+.|++.++         .+|++++  |+++|+++|.++++  .   |++.++
T Consensus       373 pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~---~~~~~~  449 (485)
T 2qzs_A          373 PSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWS---RPSLWR  449 (485)
T ss_dssp             CCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHT---SHHHHH
T ss_pred             CCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcC---CHHHHH
Confidence            688899999999999999999999999999999988         8999996  79999999999993  2   489999


Q ss_pred             HHHHHHHHhccccchHHHHHHHHHHHHHHHhh
Q 011979          438 KLRNGTLEMGLSARWATEWEEHAKPLITEVIS  469 (473)
Q Consensus       438 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~  469 (473)
                      +|++++++  +.|+|+...+++ ..++++++.
T Consensus       450 ~~~~~~~~--~~fs~~~~~~~~-~~ly~~~~~  478 (485)
T 2qzs_A          450 FVQRQAMA--MDFSWQVAAKSY-RELYYRLKL  478 (485)
T ss_dssp             HHHHHHHH--CCCCHHHHHHHH-HHHHHHHC-
T ss_pred             HHHHHHHh--hcCCHHHHHHHH-HHHHHHhhh
Confidence            99999986  589999887774 456665544

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A

Probab=100.00  E-value=1.1e-34  Score=305.35  Aligned_cols=290  Identities=13%  Similarity=0.117  Sum_probs=218.9

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhh--CCCeEEEEecCchhhhh-h---h-hcC-CCchH----HHH--HHHHHHHHh
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLL-S---L-SLG-RRSHF----VSI--YRWIEKYYG  164 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~--~~~~~i~~~h~~~~~~~-~---~-~~~-~~~~~----~~~--~~~~e~~~~  164 (473)
                      ..+||+||+|++   ....++.++++.  .++|+|+++|+.++... .   . ..+ ....+    ...  ...+++...
T Consensus       128 ~~~~DiIh~~~~---~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (485)
T 1rzu_A          128 GWRPDMVHAHDW---QAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGL  204 (485)
T ss_dssp             SCCCSEEEEEHH---HHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHH
T ss_pred             CCCCCEEEeccc---chhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHH
Confidence            368999999983   333234455554  78999999999742110 0   0 000 00000    000  013566777


Q ss_pred             hcCCEEEEcCHHHHHHHHHH-hC-----------CceEEeeCC-CCCCcccCChh----------------HHHHHHHhh
Q 011979          165 KMANGCLCVTQAMQHELAQN-WG-----------IKATVLYDQ-PPEFFHPTSLE----------------EKHELFCRL  215 (473)
Q Consensus       165 ~~ad~vi~vS~~~~~~l~~~-~g-----------~~~~vi~n~-~~~~f~~~~~~----------------~~~~l~~~l  215 (473)
                      +.+|.++++|+.+++.+.+. +|           .++.+++|+ +.+.|.+....                .+..++.++
T Consensus       205 ~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  284 (485)
T 1rzu_A          205 QTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHF  284 (485)
T ss_dssp             HHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHH
T ss_pred             hhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhc
Confidence            88999999999999988764 33           348999999 44666654321                245566665


Q ss_pred             hhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCC-CCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccC
Q 011979          216 NKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN-RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED  294 (473)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~  294 (473)
                      +                                    ++++ .+ +++|+|++.+.||++.+++|+..+.+         
T Consensus       285 ~------------------------------------~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~---------  318 (485)
T 1rzu_A          285 R------------------------------------IDDDGSP-LFCVISRLTWQKGIDLMAEAVDEIVS---------  318 (485)
T ss_dssp             T------------------------------------CCCSSSC-EEEEESCBSTTTTHHHHHTTHHHHHH---------
T ss_pred             C------------------------------------CCCCCCe-EEEEEccCccccCHHHHHHHHHHHHh---------
Confidence            5                                    2332 33 89999999999999999999999876         


Q ss_pred             CCchhhHHHhhhccCccccCCCEEEEEEcCCCC--hHHHHHHHHHcCCCcEE-EecCCCCcccHHHHHhcCcEEEEeccC
Q 011979          295 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVA-FRTMWLSAEDYPLLLGSADLGVCLHTS  371 (473)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~--~~~l~~~~~~~~l~~V~-~~g~~v~~~~i~~~l~~adi~v~~~~~  371 (473)
                                          ++++|+|+|+|+.  .+.+++++++++ ++|. |.|.  +.+++..+|+.||++|+   |
T Consensus       319 --------------------~~~~l~ivG~g~~~~~~~l~~~~~~~~-~~v~~~~g~--~~~~~~~~~~~adv~v~---p  372 (485)
T 1rzu_A          319 --------------------LGGRLVVLGAGDVALEGALLAAASRHH-GRVGVAIGY--NEPLSHLMQAGCDAIII---P  372 (485)
T ss_dssp             --------------------TTCEEEEEECBCHHHHHHHHHHHHHTT-TTEEEEESC--CHHHHHHHHHHCSEEEE---C
T ss_pred             --------------------cCceEEEEeCCchHHHHHHHHHHHhCC-CcEEEecCC--CHHHHHHHHhcCCEEEE---C
Confidence                                4899999999973  678888888886 7898 5554  67777999999999999   6


Q ss_pred             CCCCCCcHHHHHHHhcCCcEEEeccCccccceecC---------CceEEeC--CHHHHHHHHHHHHh--CCCCCHHHHHH
Q 011979          372 SSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD---------KNGLLFS--SSSELADQLLMLFK--GFPDDSDVLKK  438 (473)
Q Consensus       372 s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~---------~~G~~~~--~~~~la~~i~~l~~--~~~~~~~~~~~  438 (473)
                      |..|+||++++||||||+|||+++.+|+.|++.++         .+|++++  |+++|+++|.++++  .   |++.+++
T Consensus       373 S~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~---~~~~~~~  449 (485)
T 1rzu_A          373 SRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYH---DPKLWTQ  449 (485)
T ss_dssp             CSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHT---CHHHHHH
T ss_pred             cccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhC---CHHHHHH
Confidence            88899999999999999999999999999999988         8999996  79999999999993  2   4899999


Q ss_pred             HHHHHHHhccccchHHHHHHHHHHHHHHHhh
Q 011979          439 LRNGTLEMGLSARWATEWEEHAKPLITEVIS  469 (473)
Q Consensus       439 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~  469 (473)
                      |++++++  +.|+|+...+++ ..+++++.+
T Consensus       450 ~~~~~~~--~~fs~~~~~~~~-~~~y~~~~~  477 (485)
T 1rzu_A          450 MQKLGMK--SDVSWEKSAGLY-AALYSQLIS  477 (485)
T ss_dssp             HHHHHHT--CCCBHHHHHHHH-HHHHHHHTC
T ss_pred             HHHHHHH--HhCChHHHHHHH-HHHHHHhhC
Confidence            9999986  589999887774 456666554

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*

Probab=100.00  E-value=8.1e-34  Score=316.30  Aligned_cols=371  Identities=11%  Similarity=0.105  Sum_probs=249.5

Q ss_pred             HHHHhhCCCcEE----EEecCCCCC--------CcccccCCCEEEEEeecCCCC---CCCCcc--hhHHHHHHH-HHHHH
Q 011979           26 LSLARQMSLEVD----VVAYGGSKP--------HAAILEHPSIHIHTMTQWPTI---PRGLPK--VLKPVLLLL-KPLIQ   87 (473)
Q Consensus        26 ~~L~~~~g~eV~----vi~~~~~~~--------~~~~~~~~~i~i~~~~~~~~~---~~~~~~--~~~~~~~~~-~~~~~   87 (473)
                      ..|+++ ||+|+    |+|.....+        .+.+...+|++++++|..+..   ...+++  +...+..+. ..+..
T Consensus       321 ~~L~~~-G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~  399 (816)
T 3s28_A          321 QRIKQQ-GLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVE  399 (816)
T ss_dssp             HHHHHT-TCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHH
T ss_pred             HHHHHC-CCccceeeEEEeCCCCCCCCCccCCcceeecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHH
Confidence            344555 99886    998553221        111222369999999843321   111111  222222111 11111


Q ss_pred             HHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHH-----HHHHHH
Q 011979           88 FFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIY-----RWIEKY  162 (473)
Q Consensus        88 ~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~-----~~~e~~  162 (473)
                            .+.....+||+||+|.   ..+..++.++++..++|+|++.|+++.................+     ...|+.
T Consensus       400 ------il~~~~~~PDVIHsH~---~~sglva~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~  470 (816)
T 3s28_A          400 ------LSKELNGKPDLIIGNY---SDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIF  470 (816)
T ss_dssp             ------HHHHCSSCCSEEEEEH---HHHHHHHHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHH
T ss_pred             ------HHHhcCCCCeEEEeCC---chHHHHHHHHHHHcCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHH
Confidence                  1111124799999997   55565678888888999999999985322210000001111111     124777


Q ss_pred             HhhcCCEEEEcCHHHHHHHHH---HhC---------------------CceEEeeCC-CCCCcccCChhHH--HHHHHhh
Q 011979          163 YGKMANGCLCVTQAMQHELAQ---NWG---------------------IKATVLYDQ-PPEFFHPTSLEEK--HELFCRL  215 (473)
Q Consensus       163 ~~~~ad~vi~vS~~~~~~l~~---~~g---------------------~~~~vi~n~-~~~~f~~~~~~~~--~~l~~~l  215 (473)
                      ..+.||.|+|+|+..++.+.+   .|+                     .++.+|+|| +.+.|.|......  ..+...+
T Consensus       471 ~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i  550 (816)
T 3s28_A          471 AMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEI  550 (816)
T ss_dssp             HHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHH
T ss_pred             HHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccc
Confidence            889999999999998874211   111                     168999999 4477766532111  0000000


Q ss_pred             hhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCC
Q 011979          216 NKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD  295 (473)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~  295 (473)
                      ...+..+......                    -....+++++ +++|+|++.+.||++.+++|+..+.++         
T Consensus       551 ~~~l~~p~~~r~~--------------------lg~l~~~~~~-vIl~vGRl~~~KGid~LIeA~~~L~~~---------  600 (816)
T 3s28_A          551 EELLYSDVENKEH--------------------LCVLKDKKKP-ILFTMARLDRVKNLSGLVEWYGKNTRL---------  600 (816)
T ss_dssp             HHHHHCSCCBTTE--------------------ESCBSCTTSC-EEEEECCCCTTTTHHHHHHHHHHCHHH---------
T ss_pred             cccccchhhHHHH--------------------hcccCCCCCe-EEEEEccCcccCCHHHHHHHHHHHHhh---------
Confidence            0000000000000                    0000133444 999999999999999999999999773         


Q ss_pred             CchhhHHHhhhccCccccCCCEEEEEEcCCC-----------ChHHHHHHHHHcCC-CcEEEecC---CCCcccHHHHHh
Q 011979          296 STNEEVFLKEISDGKQYLYPRLLFIITGKGP-----------DKESYEEKIRRLRL-KRVAFRTM---WLSAEDYPLLLG  360 (473)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~-----------~~~~l~~~~~~~~l-~~V~~~g~---~v~~~~i~~~l~  360 (473)
                                        .++++|+|+|+|+           ..+.++++++++++ ++|.|+|.   +++.+++..+|.
T Consensus       601 ------------------~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~  662 (816)
T 3s28_A          601 ------------------RELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYIC  662 (816)
T ss_dssp             ------------------HHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHH
T ss_pred             ------------------CCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHH
Confidence                              5789999999998           45788999999999 89999995   144588999998


Q ss_pred             -cCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC--CHHHHHHHHHHHH----hCCCCCH
Q 011979          361 -SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLF----KGFPDDS  433 (473)
Q Consensus       361 -~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~----~~~~~~~  433 (473)
                       .+|++|+   ||..|+||++++||||||+|||+|+.+|+.|++.++.+|++++  |+++++++|.+++    .    |+
T Consensus       663 ~aaDvfV~---PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~----d~  735 (816)
T 3s28_A          663 DTKGAFVQ---PALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKE----DP  735 (816)
T ss_dssp             HTTCEEEE---CCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHH----CT
T ss_pred             hcCeEEEE---CCCccCccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhcc----CH
Confidence             6899999   7888999999999999999999999999999999999999997  7999999998776    6    48


Q ss_pred             HHHHHHHHHHHHhc-cccchHHHHHHHHH
Q 011979          434 DVLKKLRNGTLEMG-LSARWATEWEEHAK  461 (473)
Q Consensus       434 ~~~~~~~~~~~~~~-~~~~w~~~~~~~~~  461 (473)
                      +.+++|++++++.+ +.|+|+...+++.+
T Consensus       736 ~~~~~m~~~ar~~a~~~fSwe~~a~~ll~  764 (816)
T 3s28_A          736 SHWDEISKGGLQRIEEKYTWQIYSQRLLT  764 (816)
T ss_dssp             HHHHHHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            99999999999988 78999887777543

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=100.00  E-value=7.5e-33  Score=278.08  Aligned_cols=293  Identities=16%  Similarity=0.095  Sum_probs=219.2

Q ss_pred             CCCChhHH-HHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 011979           15 LGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW   93 (473)
Q Consensus        15 ~g~s~r~~-~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (473)
                      .||..+.. ..+..|.++ ||+|++++.......     .+++++++.+          ..    ..+.+.+        
T Consensus        29 ~gG~~~~~~~l~~~L~~~-G~~v~v~~~~~~~~~-----~~~~~~~~~~----------~~----~~l~~~l--------   80 (342)
T 2iuy_A           29 YGGIQWVVANLMDGLLEL-GHEVFLLGAPGSPAG-----RPGLTVVPAG----------EP----EEIERWL--------   80 (342)
T ss_dssp             SCHHHHHHHHHHHHHHHT-TCEEEEESCTTSCCC-----STTEEECSCC----------SH----HHHHHHH--------
T ss_pred             CChHHHHHHHHHHHHHHc-CCeEEEEecCCCCCC-----CCcceeccCC----------cH----HHHHHHH--------
Confidence            45555544 456777776 999999997654321     2355543221          00    1122222        


Q ss_pred             HHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEc
Q 011979           94 FLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV  173 (473)
Q Consensus        94 ~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v  173 (473)
                          +..+||+||++.+.....      +++..++| |+++|+...       ..                ..+|.++++
T Consensus        81 ----~~~~~Dvi~~~~~~~~~~------~~~~~~~p-v~~~h~~~~-------~~----------------~~~d~ii~~  126 (342)
T 2iuy_A           81 ----RTADVDVVHDHSGGVIGP------AGLPPGTA-FISSHHFTT-------RP----------------VNPVGCTYS  126 (342)
T ss_dssp             ----HHCCCSEEEECSSSSSCS------TTCCTTCE-EEEEECSSS-------BC----------------SCCTTEEES
T ss_pred             ----HhcCCCEEEECCchhhHH------HHhhcCCC-EEEecCCCC-------Cc----------------ccceEEEEc
Confidence                227899999998653221      14566899 999999842       11                119999999


Q ss_pred             CHHHHHHHHHHhCCceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccc
Q 011979          174 TQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF  252 (473)
Q Consensus       174 S~~~~~~l~~~~g~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (473)
                      |+.+++.+.+  +.++.+++|+.+ +.|.+...                                               
T Consensus       127 S~~~~~~~~~--~~~~~vi~ngvd~~~~~~~~~-----------------------------------------------  157 (342)
T 2iuy_A          127 SRAQRAHCGG--GDDAPVIPIPVDPARYRSAAD-----------------------------------------------  157 (342)
T ss_dssp             CHHHHHHTTC--CTTSCBCCCCBCGGGSCCSTT-----------------------------------------------
T ss_pred             CHHHHHHHhc--CCceEEEcCCCChhhcCcccc-----------------------------------------------
Confidence            9999988876  566889999843 44433210                                               


Q ss_pred             cCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHH
Q 011979          253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE  332 (473)
Q Consensus       253 ~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~  332 (473)
                      ..++++ .++|+|++.+.||++.+++|++.+                                +++|+|+|+|+..+.++
T Consensus       158 ~~~~~~-~i~~vG~~~~~Kg~~~li~a~~~~--------------------------------~~~l~i~G~g~~~~~l~  204 (342)
T 2iuy_A          158 QVAKED-FLLFMGRVSPHKGALEAAAFAHAC--------------------------------GRRLVLAGPAWEPEYFD  204 (342)
T ss_dssp             CCCCCS-CEEEESCCCGGGTHHHHHHHHHHH--------------------------------TCCEEEESCCCCHHHHH
T ss_pred             cCCCCC-EEEEEeccccccCHHHHHHHHHhc--------------------------------CcEEEEEeCcccHHHHH
Confidence            011233 799999999999999999999874                                48999999999999999


Q ss_pred             HHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCC----------CCCCcHHHHHHHhcCCcEEEeccCccccc
Q 011979          333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS----------GLDLPMKVVDMFGCGLPVCAVSYSCIEEL  402 (473)
Q Consensus       333 ~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~----------~e~~p~kv~Eama~G~PvI~~~~~~~~e~  402 (473)
                      +++++++ ++|.|+|. ++.+++..+|+.||++|+   ||.          .|+||++++|||+||+|||+++.++..|+
T Consensus       205 ~~~~~~~-~~v~~~g~-~~~~~l~~~~~~adv~v~---ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~  279 (342)
T 2iuy_A          205 EITRRYG-STVEPIGE-VGGERRLDLLASAHAVLA---MSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEI  279 (342)
T ss_dssp             HHHHHHT-TTEEECCC-CCHHHHHHHHHHCSEEEE---CCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHH
T ss_pred             HHHHHhC-CCEEEecc-CCHHHHHHHHHhCCEEEE---CCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHH
Confidence            9999988 89999998 999999999999999999   565          79999999999999999999999999999


Q ss_pred             eec--CCceEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHHHHHHHHHhh
Q 011979          403 VKV--DKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAKPLITEVIS  469 (473)
Q Consensus       403 i~~--~~~G~~~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~  469 (473)
                      +.+  +.+|++++ |+++++++|.++++            ++++++.. +.++|+...+++ ..+++++++
T Consensus       280 ~~~~~~~~g~~~~~d~~~l~~~i~~l~~------------~~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~  337 (342)
T 2iuy_A          280 VPSVGEVVGYGTDFAPDEARRTLAGLPA------------SDEVRRAAVRLWGHVTIAERY-VEQYRRLLA  337 (342)
T ss_dssp             GGGGEEECCSSSCCCHHHHHHHHHTSCC------------HHHHHHHHHHHHBHHHHHHHH-HHHHHHHHT
T ss_pred             hcccCCCceEEcCCCHHHHHHHHHHHHH------------HHHHHHHHHHhcCHHHHHHHH-HHHHHHHHc
Confidence            999  89999998 99999999998865            33444433 478998777664 445555543

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*

Probab=100.00  E-value=7.5e-32  Score=277.41  Aligned_cols=269  Identities=13%  Similarity=0.188  Sum_probs=209.8

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCC----CeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCC--EEEEc
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRR----SAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMAN--GCLCV  173 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~----~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad--~vi~v  173 (473)
                      .+||+||++++   ... .+.++....+    .+++..+|....       .....        .+.+.+.+|  .++++
T Consensus        80 ~~~Div~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~--------~~~~~~~~~~~~ii~~  140 (413)
T 3oy2_A           80 HKPDIVMIYND---PIV-IGNYLLAMGKCSHRTKIVLYVDLVSK-------NIREN--------LWWIFSHPKVVGVMAM  140 (413)
T ss_dssp             HCCSEEEEEEC---HHH-HHHHHHHGGGCCSCCEEEEEECCCSB-------SCCGG--------GGGGGGCTTEEEEEES
T ss_pred             cCCCEEEEcch---HHH-HHHHHHHhccCCCCCceeeeccccch-------hhHHH--------HHHHHhccCCceEEEc
Confidence            68999999963   222 2334444443    355666776521       11111        245667888  99999


Q ss_pred             CHHHHHHHHHHhCC--ceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccc
Q 011979          174 TQAMQHELAQNWGI--KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID  250 (473)
Q Consensus       174 S~~~~~~l~~~~g~--~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (473)
                      |+.+++.+.+ +|.  ++.+++|+.+ +.|        ...+.+++                                  
T Consensus       141 S~~~~~~~~~-~~~~~~~~vi~ngvd~~~~--------~~~~~~~~----------------------------------  177 (413)
T 3oy2_A          141 SKCWISDICN-YGCKVPINIVSHFVDTKTI--------YDARKLVG----------------------------------  177 (413)
T ss_dssp             STHHHHHHHH-TTCCSCEEECCCCCCCCCC--------TTHHHHTT----------------------------------
T ss_pred             CHHHHHHHHH-cCCCCceEEeCCCCCHHHH--------HHHHHhcC----------------------------------
Confidence            9999999988 664  4899999944 444        11222222                                  


Q ss_pred             cccCC-CCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh-
Q 011979          251 VFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-  328 (473)
Q Consensus       251 ~~~~~-~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-  328 (473)
                        +++ +....++|+|++.+.||++.+++|+..+.++                           .|+++|+|+|+|+.. 
T Consensus       178 --~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~ivG~g~~~~  228 (413)
T 3oy2_A          178 --LSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISK---------------------------YPDAKVRFLCNSHHES  228 (413)
T ss_dssp             --CGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHH---------------------------CTTCCEEEEEECCTTC
T ss_pred             --CCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHh---------------------------CCCcEEEEEeCCcccc
Confidence              111 1234899999999999999999999998773                           789999999999865 


Q ss_pred             -----HHHHHHHHHcCC-Cc-------EEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec
Q 011979          329 -----ESYEEKIRRLRL-KR-------VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS  395 (473)
Q Consensus       329 -----~~l~~~~~~~~l-~~-------V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~  395 (473)
                           +.++++++++++ ++       |.+.|. ++.+++..+|+.||++|+   ||..|+||++++||||||+|||+++
T Consensus       229 ~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~-~~~~~~~~~~~~adv~v~---pS~~E~~~~~~lEAma~G~PvI~s~  304 (413)
T 3oy2_A          229 KFDLHSIALRELVASGVDNVFTHLNKIMINRTV-LTDERVDMMYNACDVIVN---CSSGEGFGLCSAEGAVLGKPLIISA  304 (413)
T ss_dssp             SCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSC-CCHHHHHHHHHHCSEEEE---CCSCCSSCHHHHHHHTTTCCEEEEC
T ss_pred             hhhHHHHHHHHHHHcCcccccccccceeeccCc-CCHHHHHHHHHhCCEEEe---CCCcCCCCcHHHHHHHcCCCEEEcC
Confidence                 889999999999 45       777776 999999999999999999   7889999999999999999999999


Q ss_pred             cCccccceecCCc---------------eE--EeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHH
Q 011979          396 YSCIEELVKVDKN---------------GL--LFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATE  455 (473)
Q Consensus       396 ~~~~~e~i~~~~~---------------G~--~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~  455 (473)
                      .++..|++.++.+               |+  +++  |+++++++| +++++    ++.+++|++++++.. +.|+|+..
T Consensus       305 ~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~~----~~~~~~~~~~a~~~~~~~fs~~~~  379 (413)
T 3oy2_A          305 VGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFKD----EKNRKEYGKRVQDFVKTKPTWDDI  379 (413)
T ss_dssp             CHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTTS----HHHHHHHHHHHHHHHTTSCCHHHH
T ss_pred             CCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhcC----HHHHHHHHHHHHHHHHHhCCHHHH
Confidence            9999999998887               88  875  899999999 99985    999999999999986 67999887


Q ss_pred             HHHHHHHHHHHHhh
Q 011979          456 WEEHAKPLITEVIS  469 (473)
Q Consensus       456 ~~~~~~~~~~~~~~  469 (473)
                      .++ +..+++++..
T Consensus       380 ~~~-~~~~~~~~~~  392 (413)
T 3oy2_A          380 SSD-IIDFFNSLLR  392 (413)
T ss_dssp             HHH-HHHHHHHHTC
T ss_pred             HHH-HHHHHHHHHh
Confidence            776 4455555543

>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*

Probab=99.98  E-value=3.9e-30  Score=276.19  Aligned_cols=290  Identities=14%  Similarity=0.110  Sum_probs=206.4

Q ss_pred             CCCEEEEeCCCchhHHHHHHHHHh-------hCCCeEEEEecCchhhh------hhhhcCCCchHHHH------------
Q 011979          101 SPDVFLVQNPPSVPTLVAVKWASS-------LRRSAFIVDWHNFGYTL------LSLSLGRRSHFVSI------------  155 (473)
Q Consensus       101 ~~Dvi~~~~p~~~~~~~~~~~~~~-------~~~~~~i~~~h~~~~~~------~~~~~~~~~~~~~~------------  155 (473)
                      .+|++|+|+   +.+..+..+++.       .+++|+|+|+|+..+.-      ..............            
T Consensus       153 ~ddIiH~hD---W~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (536)
T 3vue_A          153 EDVVFVCND---WHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEG  229 (536)
T ss_dssp             SCEEEEEES---GGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCE
T ss_pred             CCEEEEECc---chHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccc
Confidence            467888999   444333333332       24799999999874210      00000000000000            


Q ss_pred             -HHHHHHHHhhcCCEEEEcCHHHHHHHHHHhC-----------CceEEeeCC-CCCCcccCC-------------hh---
Q 011979          156 -YRWIEKYYGKMANGCLCVTQAMQHELAQNWG-----------IKATVLYDQ-PPEFFHPTS-------------LE---  206 (473)
Q Consensus       156 -~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g-----------~~~~vi~n~-~~~~f~~~~-------------~~---  206 (473)
                       .-.+++.....||.|+|||+.+++++.+.++           .++.+|+|| +.+.|.|..             .+   
T Consensus       230 ~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~  309 (536)
T 3vue_A          230 RKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKA  309 (536)
T ss_dssp             EEEEHHHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHH
T ss_pred             cchhHHHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhH
Confidence             0013556667899999999999999877553           248999999 446676632             11   


Q ss_pred             -HHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHH
Q 011979          207 -EKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDR  285 (473)
Q Consensus       207 -~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~  285 (473)
                       .+..+...++.                                  ...++.| +|+++||+.++||++.|++|+..+.+
T Consensus       310 ~~k~~l~~~~gl----------------------------------~~d~~~p-~i~~vgRl~~~Kg~~~li~a~~~l~~  354 (536)
T 3vue_A          310 LNKEALQAEAGL----------------------------------PVDRKIP-LIAFIGRLEEQKGPDVMAAAIPELMQ  354 (536)
T ss_dssp             HHHHHHHHHTTS----------------------------------CCCTTSC-EEEEECCBSGGGCHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhcCC----------------------------------CCCCCCc-EEEEEeeccccCChHHHHHHHHHhHh
Confidence             12333333331                                  2334566 99999999999999999999999855


Q ss_pred             HHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh--HHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCc
Q 011979          286 RVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSAD  363 (473)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~--~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~ad  363 (473)
                                                   ++.+|+|+|.|+..  ..++.....++ .+|.+.+. .+.+++..+|+.||
T Consensus       355 -----------------------------~~~~l~l~G~G~~~~~~~~~~~~~~~~-~~v~~~~~-~~~~~~~~~~~~aD  403 (536)
T 3vue_A          355 -----------------------------EDVQIVLLGTGKKKFEKLLKSMEEKYP-GKVRAVVK-FNAPLAHLIMAGAD  403 (536)
T ss_dssp             -----------------------------SSCEEEEECCBCHHHHHHHHHHHHHST-TTEEEECS-CCHHHHHHHHHHCS
T ss_pred             -----------------------------hCCeEEEEeccCchHHHHHHHHHhhcC-CceEEEEe-ccHHHHHHHHHhhh
Confidence                                         46788899988643  33444444443 68999988 89999999999999


Q ss_pred             EEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceE----------EeC--CHHHHHHHHHHHHhCCCC
Q 011979          364 LGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGL----------LFS--SSSELADQLLMLFKGFPD  431 (473)
Q Consensus       364 i~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~----------~~~--~~~~la~~i~~l~~~~~~  431 (473)
                      ++|+   ||..|+||++++|||+||+|||+|+.||+.|+|.++.+|+          +++  |+++|+++|.++++.+  
T Consensus       404 ~~v~---PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~--  478 (536)
T 3vue_A          404 VLAV---PSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVV--  478 (536)
T ss_dssp             EEEE---CCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHT--
T ss_pred             eeec---ccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhc--
Confidence            9999   7889999999999999999999999999999999999998          444  5899999999887642  


Q ss_pred             CHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Q 011979          432 DSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV  467 (473)
Q Consensus       432 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~  467 (473)
                      ++..+++|.+++.+  +.|+|++..+++. .|+.++
T Consensus       479 ~~~~~~~~~~~am~--~~fSW~~~A~~y~-~ly~~L  511 (536)
T 3vue_A          479 GTPAYEEMVRNCMN--QDLSWKGPAKNWE-NVLLGL  511 (536)
T ss_dssp             TSHHHHHHHHHHHH--SCCSSHHHHHHHH-HHHHTT
T ss_pred             CcHHHHHHHHHHHH--hcCCHHHHHHHHH-HHHHHh
Confidence            13457788888755  4799999988854 455544

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=99.97  E-value=7.4e-29  Score=250.49  Aligned_cols=329  Identities=16%  Similarity=0.126  Sum_probs=220.6

Q ss_pred             CeEEEEEecCCCC-ChhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHH
Q 011979            5 GRACVVVLGDLGR-SPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLK   83 (473)
Q Consensus         5 ~~~~i~~~~~~g~-s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~   83 (473)
                      ++++++..+ .|+ ..+....+..|.++ ||+|++++..... ........|++++.++....  .... ....+.....
T Consensus         7 mkIl~~~~~-~gG~~~~~~~la~~L~~~-G~~V~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~--~~~~-~~~~~~~~~~   80 (364)
T 1f0k_A            7 KRLMVMAGG-TGGHVFPGLAVAHHLMAQ-GWQVRWLGTADRM-EADLVPKHGIEIDFIRISGL--RGKG-IKALIAAPLR   80 (364)
T ss_dssp             CEEEEECCS-SHHHHHHHHHHHHHHHTT-TCEEEEEECTTST-HHHHGGGGTCEEEECCCCCC--TTCC-HHHHHTCHHH
T ss_pred             cEEEEEeCC-CccchhHHHHHHHHHHHc-CCEEEEEecCCcc-hhhhccccCCceEEecCCcc--CcCc-cHHHHHHHHH
Confidence            566666533 332 22233566777776 9999999976432 11233445888888773211  1111 0111100111


Q ss_pred             HHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHH
Q 011979           84 PLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY  163 (473)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~  163 (473)
                      .+.... -+..++ +..+||+||++.+..  .. .+.++++..++|+|++.|+...       +          ...+++
T Consensus        81 ~~~~~~-~l~~~l-~~~~pDvv~~~~~~~--~~-~~~~~~~~~~~p~v~~~~~~~~-------~----------~~~~~~  138 (364)
T 1f0k_A           81 IFNAWR-QARAIM-KAYKPDVVLGMGGYV--SG-PGGLAAWSLGIPVVLHEQNGIA-------G----------LTNKWL  138 (364)
T ss_dssp             HHHHHH-HHHHHH-HHHCCSEEEECSSTT--HH-HHHHHHHHTTCCEEEEECSSSC-------C----------HHHHHH
T ss_pred             HHHHHH-HHHHHH-HhcCCCEEEEeCCcC--ch-HHHHHHHHcCCCEEEEecCCCC-------c----------HHHHHH
Confidence            111111 111222 236899999997542  22 2455666778999999998621       1          124456


Q ss_pred             hhcCCEEEEcCHHHHHHHHHHhCCceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchh
Q 011979          164 GKMANGCLCVTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETI  242 (473)
Q Consensus       164 ~~~ad~vi~vS~~~~~~l~~~~g~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (473)
                      .+.+|.+++.++..       ++ ++.+++|+.. +.|.+..  .+    .+++                          
T Consensus       139 ~~~~d~v~~~~~~~-------~~-~~~~i~n~v~~~~~~~~~--~~----~~~~--------------------------  178 (364)
T 1f0k_A          139 AKIATKVMQAFPGA-------FP-NAEVVGNPVRTDVLALPL--PQ----QRLA--------------------------  178 (364)
T ss_dssp             TTTCSEEEESSTTS-------SS-SCEECCCCCCHHHHTSCC--HH----HHHT--------------------------
T ss_pred             HHhCCEEEecChhh-------cC-CceEeCCccchhhcccch--hh----hhcc--------------------------
Confidence            77899999998764       22 5678888743 3333221  11    1111                          


Q ss_pred             hhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEE-EEE
Q 011979          243 FTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FII  321 (473)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~i  321 (473)
                                .+++++.+++++|++.+.|+.+.+++|+..+.+                              +++ +++
T Consensus       179 ----------~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~------------------------------~~~~l~i  218 (364)
T 1f0k_A          179 ----------GREGPVRVLVVGGSQGARILNQTMPQVAAKLGD------------------------------SVTIWHQ  218 (364)
T ss_dssp             ----------TCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG------------------------------GEEEEEE
T ss_pred             ----------cCCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC------------------------------CcEEEEE
Confidence                      233455567777899999999999999998731                              577 677


Q ss_pred             EcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccc-
Q 011979          322 TGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE-  400 (473)
Q Consensus       322 vG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~-  400 (473)
                      +|+|+ .+.+++.++++++++|.|+|+ +  +++..+|+.||++|+   +| +   |++++|||+||+|||+++.++.. 
T Consensus       219 ~G~~~-~~~l~~~~~~~~~~~v~~~g~-~--~~~~~~~~~ad~~v~---~s-g---~~~~~EAma~G~Pvi~~~~~g~~~  287 (364)
T 1f0k_A          219 SGKGS-QQSVEQAYAEAGQPQHKVTEF-I--DDMAAAYAWADVVVC---RS-G---ALTVSEIAAAGLPALFVPFQHKDR  287 (364)
T ss_dssp             CCTTC-HHHHHHHHHHTTCTTSEEESC-C--SCHHHHHHHCSEEEE---CC-C---HHHHHHHHHHTCCEEECCCCCTTC
T ss_pred             cCCch-HHHHHHHHhhcCCCceEEecc-h--hhHHHHHHhCCEEEE---CC-c---hHHHHHHHHhCCCEEEeeCCCCch
Confidence            89887 577889999998888999998 4  899999999999999   44 2   89999999999999999988764 


Q ss_pred             -------cceecCCceEEeC--C--HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHH
Q 011979          401 -------ELVKVDKNGLLFS--S--SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEH  459 (473)
Q Consensus       401 -------e~i~~~~~G~~~~--~--~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~  459 (473)
                             +++ +.+.|++++  |  +++++++|.++  +    ++.+++|++++++..+.++|+...+.+
T Consensus       288 ~q~~~~~~~~-~~g~g~~~~~~d~~~~~la~~i~~l--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (364)
T 1f0k_A          288 QQYWNALPLE-KAGAAKIIEQPQLSVDAVANTLAGW--S----RETLLTMAERARAASIPDATERVANEV  350 (364)
T ss_dssp             HHHHHHHHHH-HTTSEEECCGGGCCHHHHHHHHHTC--C----HHHHHHHHHHHHHTCCTTHHHHHHHHH
T ss_pred             hHHHHHHHHH-hCCcEEEeccccCCHHHHHHHHHhc--C----HHHHHHHHHHHHHhhccCHHHHHHHHH
Confidence                   455 445599996  4  88999999888  4    889999999999988778877666553

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*

Probab=99.96  E-value=9.2e-30  Score=264.87  Aligned_cols=262  Identities=15%  Similarity=0.138  Sum_probs=184.2

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHH----h---hCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCC--EE
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWAS----S---LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMAN--GC  170 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~----~---~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad--~v  170 (473)
                      .++|+||++.   +.+...+....    .   ....|+++..|+++..     +.....    .+.+.+..++.++  .+
T Consensus       131 ~~~Dvv~a~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~----~~~~~~~~~~~~~~~~v  198 (413)
T 2x0d_A          131 AKHDIFIATA---WWTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEPG-----FYQWSS----QYVLAESTYKYRGPQIA  198 (413)
T ss_dssp             CTTEEEEECS---HHHHHHHHHHHHHHHHHHTCCCCCEEEEECSCGGG-----GSCSSH----HHHHHHHTTSCCSCEEE
T ss_pred             CCCCEEEEeh---HHHHHHHHHhhhhhhhhcccccCcEEEEEeechhh-----cCccCh----HHHHHHHHhccCCceEE
Confidence            5799999987   44443333221    0   2356888888887431     112121    1234555666555  58


Q ss_pred             EEcCHHHHHHHHHHhCC---ceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcc
Q 011979          171 LCVTQAMQHELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL  246 (473)
Q Consensus       171 i~vS~~~~~~l~~~~g~---~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (473)
                      +++|+.+++.+.+. |.   ++.+++++.+ +.|.+..                                          
T Consensus       199 i~~S~~~~~~l~~~-g~~~~~~~~i~~g~d~~~~~~~~------------------------------------------  235 (413)
T 2x0d_A          199 VFNSELLKQYFNNK-GYNFTDEYFFQPKINTTLKNYIN------------------------------------------  235 (413)
T ss_dssp             EEESHHHHHHHHHH-TCCCSEEEEECCCCCHHHHTTTT------------------------------------------
T ss_pred             EEcCHHHHHHHHHc-CCCCCceEEeCCCcCchhhcccc------------------------------------------
Confidence            99999999999875 43   3677777743 2221100                                          


Q ss_pred             cccccccCCCCCeEEEEEeec-cCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCC---EEEEEE
Q 011979          247 AGIDVFLKPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR---LLFIIT  322 (473)
Q Consensus       247 ~~~~~~~~~~~~~~i~~~G~~-~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~iv  322 (473)
                           ...++.+ .++++|++ .+.||++.+++|+..+.++                           .|+   ++|+++
T Consensus       236 -----~~~~~~~-~il~~gr~~~~~Kg~~~li~A~~~l~~~---------------------------~~~~~~~~l~iv  282 (413)
T 2x0d_A          236 -----DKRQKEK-IILVYGRPSVKRNAFTLIVEALKIFVQK---------------------------YDRSNEWKIISV  282 (413)
T ss_dssp             -----SCCCCCS-EEEEEECTTCGGGCHHHHHHHHHHHHHH---------------------------CTTGGGCEEEEE
T ss_pred             -----cccCCCC-EEEEEecCchhccCHHHHHHHHHHHHHh---------------------------CCCCCceEEEEE
Confidence                 0112223 78888996 6889999999999998763                           454   899999


Q ss_pred             cCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCcccc
Q 011979          323 GKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE  401 (473)
Q Consensus       323 G~g~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e  401 (473)
                      |+|+..       .++++ ++|.|+|. ++.++++.+|+.||++|+   +|..|+||++++||||||+|||++. +|..|
T Consensus       283 G~~~~~-------~~l~~~~~v~f~G~-~~~~~l~~~~~~adv~v~---pS~~E~~g~~~lEAmA~G~PVV~~~-~g~~e  350 (413)
T 2x0d_A          283 GEKHKD-------IALGKGIHLNSLGK-LTLEDYADLLKRSSIGIS---LMISPHPSYPPLEMAHFGLRVITNK-YENKD  350 (413)
T ss_dssp             ESCCCC-------EEEETTEEEEEEES-CCHHHHHHHHHHCCEEEC---CCSSSSCCSHHHHHHHTTCEEEEEC-BTTBC
T ss_pred             cCCchh-------hhcCCcCcEEEcCC-CCHHHHHHHHHhCCEEEE---ecCCCCCCcHHHHHHhCCCcEEEeC-CCcch
Confidence            998764       24556 68999998 999999999999999999   7888999999999999999999954 56789


Q ss_pred             ceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhc
Q 011979          402 LVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQ  470 (473)
Q Consensus       402 ~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~  470 (473)
                      ++.++.+|++++  |+++++++|.+++++    ++.+++   ++++..+.++|+...++  ..++.++.+|
T Consensus       351 ~v~~~~~G~lv~~~d~~~la~ai~~ll~~----~~~~~~---~~~~~~~~~~W~~~~~~--~~~~~~l~~~  412 (413)
T 2x0d_A          351 LSNWHSNIVSLEQLNPENIAETLVELCMS----FNNRDV---DKKESSNMMFYINEFNE--FSFIKEIEEK  412 (413)
T ss_dssp             GGGTBTTEEEESSCSHHHHHHHHHHHHHH----TC----------CCBSCGGGCCCC-----TTHHHHHTT
T ss_pred             hhhcCCCEEEeCCCCHHHHHHHHHHHHcC----HHHHHH---hHHHHHHhCCHHHHHHH--HHHHHHHHhh
Confidence            999999999885  799999999999985    555555   56666678999988766  5555555554

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A

Probab=99.95  E-value=1.7e-27  Score=241.15  Aligned_cols=263  Identities=12%  Similarity=0.040  Sum_probs=185.1

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH  179 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~  179 (473)
                      .+||+||+|++. .+.. .+.++++..++|+++..|+...      ......+..  ...++.+.+.+|.++++|+..++
T Consensus        94 ~~pDvv~~~~~~-~~~~-~~~~~~~~~~ip~v~~~~~~~~------~~~~~~~~~--~~~~~~~~~~~d~ii~~s~~~~~  163 (375)
T 3beo_A           94 AKPDIVLVHGDT-TTTF-IASLAAFYNQIPVGHVEAGLRT------WDKYSPYPE--EMNRQLTGVMADLHFSPTAKSAT  163 (375)
T ss_dssp             HCCSEEEEETTS-HHHH-HHHHHHHHTTCCEEEESCCCCC------SCTTSSTTH--HHHHHHHHHHCSEEEESSHHHHH
T ss_pred             hCCCEEEEeCCc-hHHH-HHHHHHHHHCCCEEEEeccccc------ccccCCChh--HhhhhHHhhhhheeeCCCHHHHH
Confidence            789999998742 2222 3556667788999987776511      111111100  12233445569999999999999


Q ss_pred             HHHHHhCCc---eEEeeCC-CC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccC
Q 011979          180 ELAQNWGIK---ATVLYDQ-PP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK  254 (473)
Q Consensus       180 ~l~~~~g~~---~~vi~n~-~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (473)
                      .+.+ +|.+   +.+++|+ .+ ..|.+... .+.+++.+                                      + 
T Consensus       164 ~~~~-~g~~~~~i~vi~n~~~d~~~~~~~~~-~~~~~~~~--------------------------------------~-  202 (375)
T 3beo_A          164 NLQK-ENKDESRIFITGNTAIDALKTTVKET-YSHPVLEK--------------------------------------L-  202 (375)
T ss_dssp             HHHH-TTCCGGGEEECCCHHHHHHHHHCCSS-CCCHHHHT--------------------------------------T-
T ss_pred             HHHH-cCCCcccEEEECChhHhhhhhhhhhh-hhHHHHHh--------------------------------------c-
Confidence            9876 5663   7888886 22 12211100 01111111                                      1 


Q ss_pred             CCCCeEEEEEeeccCC-CCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHH
Q 011979          255 PNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE  333 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~~-K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~  333 (473)
                      ++++.+++++|++.+. ||++.+++|+..+.++                           .|++++++ |.|+. ..+++
T Consensus       203 ~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~~i~-~~g~~-~~~~~  253 (375)
T 3beo_A          203 GNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDK---------------------------HEDVQVVY-PVHMN-PVVRE  253 (375)
T ss_dssp             TTSEEEEEECCCGGGTTHHHHHHHHHHHHHHHH---------------------------CTTEEEEE-ECCSC-HHHHH
T ss_pred             cCCCeEEEEecccccchhHHHHHHHHHHHHHhh---------------------------CCCeEEEE-eCCCC-HHHHH
Confidence            2244477899999875 9999999999998773                           57898654 66765 34555


Q ss_pred             HHHHc-CC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec-cCccccceecCCceE
Q 011979          334 KIRRL-RL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNGL  410 (473)
Q Consensus       334 ~~~~~-~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~-~~~~~e~i~~~~~G~  410 (473)
                      .++++ +. ++|.|+|. ++..++..+|+.||++|+   +|     |..++|||+||+|||+++ .++..+++.++ +|+
T Consensus       254 ~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~v~---~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~  323 (375)
T 3beo_A          254 TANDILGDYGRIHLIEP-LDVIDFHNVAARSYLMLT---DS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLK  323 (375)
T ss_dssp             HHHHHHTTCTTEEEECC-CCHHHHHHHHHTCSEEEE---CC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEE
T ss_pred             HHHHHhhccCCEEEeCC-CCHHHHHHHHHhCcEEEE---CC-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ceE
Confidence            55554 33 69999987 888899999999999999   45     567999999999999996 48899998777 999


Q ss_pred             EeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHH
Q 011979          411 LFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW  456 (473)
Q Consensus       411 ~~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~  456 (473)
                      +++ |+++++++|.+++++    ++.+++|+++++++...++|+...
T Consensus       324 ~v~~d~~~la~~i~~ll~~----~~~~~~~~~~~~~~~~~~~~~~i~  366 (375)
T 3beo_A          324 LAGTDEETIFSLADELLSD----KEAHDKMSKASNPYGDGRASERIV  366 (375)
T ss_dssp             ECCSCHHHHHHHHHHHHHC----HHHHHHHCCCCCTTCCSCHHHHHH
T ss_pred             EcCCCHHHHHHHHHHHHhC----hHhHhhhhhcCCCCCCCcHHHHHH
Confidence            994 899999999999995    889999998887755445544433

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*

Probab=99.95  E-value=3.1e-27  Score=244.88  Aligned_cols=328  Identities=12%  Similarity=0.059  Sum_probs=210.2

Q ss_pred             CeEEEEEec-CC-CCChhHHHHHHHHHhhCCCcEEEEecCCCC-------C-------CcccccCCCEEEEEeecCCCCC
Q 011979            5 GRACVVVLG-DL-GRSPRMQYQALSLARQMSLEVDVVAYGGSK-------P-------HAAILEHPSIHIHTMTQWPTIP   68 (473)
Q Consensus         5 ~~~~i~~~~-~~-g~s~r~~~~a~~L~~~~g~eV~vi~~~~~~-------~-------~~~~~~~~~i~i~~~~~~~~~~   68 (473)
                      ++++++... .. +..+...+.+..|+++ | +|+|++.....       .       .+.....+|+++++......+.
T Consensus        15 MkIl~is~~~~p~~~~~~~~~l~~~l~~~-G-~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~~~~~   92 (406)
T 2hy7_A           15 PCYLVLSSHDFRTPRRANIHFITDQLALR-G-TTRFFSLRYSRLSRMKGDMRLPLDDTANTVVSHNGVDCYLWRTTVHPF   92 (406)
T ss_dssp             SCEEEEESSCTTSSSCCHHHHHHHHHHHH-S-CEEEEECSCBTTHHHHTCTTGGGGGGTTSEEEETTEEEEECCBSSCCC
T ss_pred             ceEEEEecccCCChhhhhHhHHHHHHHhC-C-ceEEEEecccHHHHhhccchhhhhccCccceecCCeEEEeeccccCCc
Confidence            345545433 22 2334445666778877 9 99999643210       0       0111224688888765322221


Q ss_pred             CCCcchhHHHHHH-HHHH-HHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhc
Q 011979           69 RGLPKVLKPVLLL-LKPL-IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSL  146 (473)
Q Consensus        69 ~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~  146 (473)
                      .......+.+... .... ......+..+.   .++|+||....  .... ++ .+++..++|+++++|+.....   ..
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~DvIh~~~~--~~~~-~~-~~~~~~~~p~v~~~h~~~~~~---~~  162 (406)
T 2hy7_A           93 NTRRSWLRPVEDAMFRWYAAHPPKQLLDWM---RESDVIVFESG--IAVA-FI-ELAKRVNPAAKLVYRASDGLS---TI  162 (406)
T ss_dssp             CCCCGGGHHHHHHHHHHHHHCCCHHHHHHH---HHCSEEEEESS--GGGG-GH-HHHHHHCTTSEEEEEESSCHH---HH
T ss_pred             cccchhhhccchhHHHHHHHhHHHHHHHHh---cCCCEEEECCc--hHHH-HH-HHHHHhCCCEEEEEeccchhh---cc
Confidence            1111222222110 0000 00000111111   36899995442  2111 11 233445789999999752200   01


Q ss_pred             CCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCc
Q 011979          147 GRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGV  225 (473)
Q Consensus       147 ~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~  225 (473)
                      . ..   ...+.+++...+.+|.++++|+.+++.+.+. + ++.+++||.+ +.|.+..                     
T Consensus       163 ~-~~---~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~-~-~i~vipngvd~~~f~~~~---------------------  215 (406)
T 2hy7_A          163 N-VA---SYIEREFDRVAPTLDVIALVSPAMAAEVVSR-D-NVFHVGHGVDHNLDQLGD---------------------  215 (406)
T ss_dssp             T-CC---HHHHHHHHHHGGGCSEEEESCGGGGGGCSCS-T-TEEECCCCBCTTHHHHHC---------------------
T ss_pred             c-cc---HHHHHHHHHHHHhCCEEEEcCHHHHHHHHhc-C-CEEEEcCCcChHhcCccc---------------------
Confidence            1 11   2344667888899999999999999888653 5 8999999944 4442211                     


Q ss_pred             ccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhh
Q 011979          226 QDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKE  305 (473)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~  305 (473)
                                                ..+.+.+..++|+|++.+.||+   ++++   .+                    
T Consensus       216 --------------------------~~~~~~~~~i~~vGrl~~~Kg~---~~~l---~~--------------------  243 (406)
T 2hy7_A          216 --------------------------PSPYAEGIHAVAVGSMLFDPEF---FVVA---SK--------------------  243 (406)
T ss_dssp             --------------------------SCSCCSSEEEEEECCTTBCHHH---HHHH---HH--------------------
T ss_pred             --------------------------ccccCCCcEEEEEeccccccCH---HHHH---HH--------------------
Confidence                                      0011232489999999999998   3333   33                    


Q ss_pred             hccCccccCCCEEEEEEcCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHH
Q 011979          306 ISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDM  384 (473)
Q Consensus       306 ~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Ea  384 (473)
                             ..|+++|+|+|+|+        ++++++ ++|.|+|. ++.+++..+|+.||++|+   ||..|++|++++||
T Consensus       244 -------~~~~~~l~ivG~g~--------~~~~~l~~~V~f~G~-~~~~~l~~~~~~adv~v~---ps~~E~~~~~~lEA  304 (406)
T 2hy7_A          244 -------AFPQVTFHVIGSGM--------GRHPGYGDNVIVYGE-MKHAQTIGYIKHARFGIA---PYASEQVPVYLADS  304 (406)
T ss_dssp             -------HCTTEEEEEESCSS--------CCCTTCCTTEEEECC-CCHHHHHHHHHTCSEEEC---CBSCSCCCTTHHHH
T ss_pred             -------hCCCeEEEEEeCch--------HHhcCCCCCEEEcCC-CCHHHHHHHHHhcCEEEE---CCCcccCchHHHHH
Confidence                   15899999999987        556677 79999998 999999999999999999   67789999999999


Q ss_pred             H-------hcCCcEEEeccCccccceecCCceEE-eC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHH
Q 011979          385 F-------GCGLPVCAVSYSCIEELVKVDKNGLL-FS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWAT  454 (473)
Q Consensus       385 m-------a~G~PvI~~~~~~~~e~i~~~~~G~~-~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~  454 (473)
                      |       |||+|||+|+.      +.++.+|++ ++  |+++|+++|.+++++    ++         .+..+.++|+.
T Consensus       305 m~Kl~eYla~G~PVIas~~------v~~~~~G~l~v~~~d~~~la~ai~~ll~~----~~---------~~~~~~~sw~~  365 (406)
T 2hy7_A          305 SMKLLQYDFFGLPAVCPNA------VVGPYKSRFGYTPGNADSVIAAITQALEA----PR---------VRYRQCLNWSD  365 (406)
T ss_dssp             CHHHHHHHHHTCCEEEEGG------GTCSCSSEEEECTTCHHHHHHHHHHHHHC----CC---------CCCSCCCBHHH
T ss_pred             HHHHHHHhhCCCcEEEehh------cccCcceEEEeCCCCHHHHHHHHHHHHhC----cc---------hhhhhcCCHHH
Confidence            9       99999999987      667888998 75  799999999999996    22         13346899988


Q ss_pred             HHHHHHH
Q 011979          455 EWEEHAK  461 (473)
Q Consensus       455 ~~~~~~~  461 (473)
                      ..+++.+
T Consensus       366 ~a~~~~~  372 (406)
T 2hy7_A          366 TTDRVLD  372 (406)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHHH
Confidence            8777653

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*

Probab=99.94  E-value=1.4e-26  Score=235.46  Aligned_cols=268  Identities=15%  Similarity=0.112  Sum_probs=185.0

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchH-HHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      .+||+||++++.. ... .+.++++..++|++++.|+...      ......+ ..   .....+.+.+|.++++|+..+
T Consensus        85 ~~pDvv~~~~~~~-~~~-~~~~~a~~~~ip~v~~~~~~~~------~~~~~~~~~~---~~~~~~~~~~d~ii~~s~~~~  153 (384)
T 1vgv_A           85 FKPDVVLVHGDTT-TTL-ATSLAAFYQRIPVGHVEAGLRT------GDLYSPWPEE---ANRTLTGHLAMYHFSPTETSR  153 (384)
T ss_dssp             HCCSEEEEETTCH-HHH-HHHHHHHTTTCCEEEESCCCCC------SCTTSSTTHH---HHHHHHHTTCSEEEESSHHHH
T ss_pred             hCCCEEEEeCCch-HHH-HHHHHHHHHCCCEEEEeccccc------ccccCCCchH---hhHHHHHhhccEEEcCcHHHH
Confidence            7899999997422 222 3456667788999999888731      1110111 11   112233567999999999999


Q ss_pred             HHHHHHhCCc---eEEeeCCC-CCCcccCC-----hhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccccc
Q 011979          179 HELAQNWGIK---ATVLYDQP-PEFFHPTS-----LEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGI  249 (473)
Q Consensus       179 ~~l~~~~g~~---~~vi~n~~-~~~f~~~~-----~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (473)
                      +.+.+ +|.+   +.+++|+. +..+.+..     ...+.+++.+++                                 
T Consensus       154 ~~l~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------  199 (384)
T 1vgv_A          154 QNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYP---------------------------------  199 (384)
T ss_dssp             HHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCT---------------------------------
T ss_pred             HHHHH-cCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhcc---------------------------------
Confidence            98876 5764   67777762 21111000     000112222211                                 


Q ss_pred             ccccCCCCCeEEEEEeeccCC-CCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEE-cCCC-
Q 011979          250 DVFLKPNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP-  326 (473)
Q Consensus       250 ~~~~~~~~~~~i~~~G~~~~~-K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv-G~g~-  326 (473)
                        .++++++.+++++|++.+. ||++.+++|+..+.++                           .|+++++++ |.++ 
T Consensus       200 --~~~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~---------------------------~~~~~l~i~~g~~~~  250 (384)
T 1vgv_A          200 --FIDPDKKMILVTGHRRESFGRGFEEICHALADIATT---------------------------HQDIQIVYPVHLNPN  250 (384)
T ss_dssp             --TCCTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCBCHH
T ss_pred             --ccCCCCCEEEEEeCCccccchHHHHHHHHHHHHHhh---------------------------CCCeEEEEEcCCCHH
Confidence              0223455588899999876 9999999999998773                           578999886 5443 


Q ss_pred             ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc-Cccccceec
Q 011979          327 DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCIEELVKV  405 (473)
Q Consensus       327 ~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~-~~~~e~i~~  405 (473)
                      ..+.+++.++.  .++|.|+|. ++.+++..+|+.||++|+   +|     |..++|||+||+|||+++. ++..+++.+
T Consensus       251 ~~~~l~~~~~~--~~~v~~~g~-~~~~~~~~~~~~ad~~v~---~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~  319 (384)
T 1vgv_A          251 VREPVNRILGH--VKNVILIDP-QEYLPFVWLMNHAWLILT---DS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTA  319 (384)
T ss_dssp             HHHHHHHHHTT--CTTEEEECC-CCHHHHHHHHHHCSEEEE---SS-----STGGGTGGGGTCCEEEESSCCSCHHHHHH
T ss_pred             HHHHHHHHhhc--CCCEEEeCC-CCHHHHHHHHHhCcEEEE---CC-----cchHHHHHHcCCCEEEccCCCCcchhhhC
Confidence            22333333321  269999987 888999999999999999   45     2348999999999999986 888999877


Q ss_pred             CCceEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHH
Q 011979          406 DKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWE  457 (473)
Q Consensus       406 ~~~G~~~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~  457 (473)
                      + +|++++ |+++++++|.+++++    ++.+++|+++++++...++|+...+
T Consensus       320 g-~g~lv~~d~~~la~~i~~ll~d----~~~~~~~~~~~~~~~~~~~~~~i~~  367 (384)
T 1vgv_A          320 G-TVRLVGTDKQRIVEEVTRLLKD----ENEYQAMSRAHNPYGDGQACSRILE  367 (384)
T ss_dssp             T-SEEEECSSHHHHHHHHHHHHHC----HHHHHHHHSSCCTTCCSCHHHHHHH
T ss_pred             C-ceEEeCCCHHHHHHHHHHHHhC----hHHHhhhhhccCCCcCCCHHHHHHH
Confidence            7 999996 899999999999995    8899999998877654555544433

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}

Probab=99.93  E-value=1.5e-25  Score=201.80  Aligned_cols=162  Identities=13%  Similarity=0.252  Sum_probs=141.5

Q ss_pred             CeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHHHH
Q 011979          258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR  337 (473)
Q Consensus       258 ~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~~  337 (473)
                      |..++|+|++.+.||++.+++|+..+++                            .|+++|+|+|+|+..+.+++.+++
T Consensus         2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~----------------------------~~~~~l~i~G~g~~~~~~~~~~~~   53 (166)
T 3qhp_A            2 PFKIAMVGRYSNEKNQSVLIKAVALSKY----------------------------KQDIVLLLKGKGPDEKKIKLLAQK   53 (166)
T ss_dssp             CEEEEEESCCSTTTTHHHHHHHHHTCTT----------------------------GGGEEEEEECCSTTHHHHHHHHHH
T ss_pred             ceEEEEEeccchhcCHHHHHHHHHHhcc----------------------------CCCeEEEEEeCCccHHHHHHHHHH
Confidence            4589999999999999999999999854                            479999999999999999999999


Q ss_pred             cCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCC-cEEEe-ccCccccceecCCceEEeCCH
Q 011979          338 LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL-PVCAV-SYSCIEELVKVDKNGLLFSSS  415 (473)
Q Consensus       338 ~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~-PvI~~-~~~~~~e~i~~~~~G~~~~~~  415 (473)
                      +++ +|.| |+ ++.+++..+|+.||++|+   ||..|++|++++|||+||+ |||++ +.++..+++.++.+.+...|+
T Consensus        54 ~~~-~v~~-g~-~~~~~~~~~~~~adv~v~---ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~~~~~~~~  127 (166)
T 3qhp_A           54 LGV-KAEF-GF-VNSNELLEILKTCTLYVH---AANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERSLFEPNNA  127 (166)
T ss_dssp             HTC-EEEC-CC-CCHHHHHHHHTTCSEEEE---CCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGGEECTTCH
T ss_pred             cCC-eEEE-ee-cCHHHHHHHHHhCCEEEE---CCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCceEEcCCCH
Confidence            998 8999 87 999999999999999999   6888999999999999998 99994 688999999887664444589


Q ss_pred             HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHH
Q 011979          416 SELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWE  457 (473)
Q Consensus       416 ~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~  457 (473)
                      ++++++|.+++++    ++.+++|++++++..++|+|+...+
T Consensus       128 ~~l~~~i~~l~~~----~~~~~~~~~~~~~~~~~~s~~~~~~  165 (166)
T 3qhp_A          128 KDLSAKIDWWLEN----KLERERMQNEYAKSALNYTLENSVI  165 (166)
T ss_dssp             HHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHHC------
T ss_pred             HHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHCChhhhhc
Confidence            9999999999995    9999999999999888899887554

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*

Probab=99.93  E-value=2.3e-25  Score=238.94  Aligned_cols=260  Identities=12%  Similarity=0.078  Sum_probs=191.6

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH  179 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~  179 (473)
                      .+||+||.+.+...... .+.++  .+..|+++++|++..       .....         ...+..+|.++++|+..++
T Consensus       281 ~~~Div~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~-------~~~~~---------~~~~~~~d~~i~~s~~~~~  341 (568)
T 2vsy_A          281 HGIDLLFDLRGWGGGGR-PEVFA--LRPAPVQVNWLAYPG-------TSGAP---------WMDYVLGDAFALPPALEPF  341 (568)
T ss_dssp             TTCSEEEECSSCTTCSS-CHHHH--TCCSSEEEEESSSSS-------CCCCT---------TCCEEEECTTTSCTTTGGG
T ss_pred             CCCCEEEECCCCCCcch-HHHHh--cCCCceeEeeecCCc-------ccCCC---------CceEEEECCCcCCcccccC
Confidence            78999998654332211 12222  245688888887521       00000         0112357888899987653


Q ss_pred             HHHHHhCCceEEeeCCCCCCcccCCh---hHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCC
Q 011979          180 ELAQNWGIKATVLYDQPPEFFHPTSL---EEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN  256 (473)
Q Consensus       180 ~l~~~~g~~~~vi~n~~~~~f~~~~~---~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (473)
                           ++.++.++||.    |.+...   ..+...+.+++                                    ++++
T Consensus       342 -----~~~~i~~ipn~----~~~~~~~~~~~~~~~r~~~~------------------------------------~~~~  376 (568)
T 2vsy_A          342 -----YSEHVLRLQGA----FQPSDTSRVVAEPPSRTQCG------------------------------------LPEQ  376 (568)
T ss_dssp             -----CSSEEEECSSC----SCCCCTTCCCCCCCCTGGGT------------------------------------CCTT
T ss_pred             -----CcceeEcCCCc----CCCCCCCCCCCCCCCccccC------------------------------------CCCC
Confidence                 45668888883    222210   00001111121                                    2222


Q ss_pred             CCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEc-CCCChHHHHHHH
Q 011979          257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KGPDKESYEEKI  335 (473)
Q Consensus       257 ~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG-~g~~~~~l~~~~  335 (473)
                       + +++++|++.+ ||++.+++|+..+.++                           .|+++|+|+| +|+..+.+++.+
T Consensus       377 -~-~v~~~g~~~~-K~~~~li~a~~~l~~~---------------------------~~~~~l~i~G~~g~~~~~l~~~~  426 (568)
T 2vsy_A          377 -G-VVLCCFNNSY-KLNPQSMARMLAVLRE---------------------------VPDSVLWLLSGPGEADARLRAFA  426 (568)
T ss_dssp             -S-CEEEECCCGG-GCCHHHHHHHHHHHHH---------------------------CTTCEEEEECCSTTHHHHHHHHH
T ss_pred             -C-EEEEeCCccc-cCCHHHHHHHHHHHHh---------------------------CCCcEEEEecCCHHHHHHHHHHH
Confidence             2 5669999999 9999999999998773                           6899999999 899889999999


Q ss_pred             HHcCC--CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEE-------eccC-------cc
Q 011979          336 RRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA-------VSYS-------CI  399 (473)
Q Consensus       336 ~~~~l--~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~-------~~~~-------~~  399 (473)
                      +++++  ++|.|+|+ ++.+++..+|+.||++|+   ||.. ++|++++|||+||+|||+       |+.+       |+
T Consensus       427 ~~~~l~~~~v~~~g~-~~~~~~~~~~~~adv~v~---ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~  501 (568)
T 2vsy_A          427 HAQGVDAQRLVFMPK-LPHPQYLARYRHADLFLD---THPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGL  501 (568)
T ss_dssp             HHTTCCGGGEEEECC-CCHHHHHHHGGGCSEEEC---CSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTC
T ss_pred             HHcCCChhHEEeeCC-CCHHHHHHHHhcCCEEee---CCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCC
Confidence            99998  58999998 999999999999999999   6766 899999999999999999       9998       88


Q ss_pred             ccceecCCceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc---cccchHHHHHHHHHHHHHHHhhcc
Q 011979          400 EELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG---LSARWATEWEEHAKPLITEVISQF  471 (473)
Q Consensus       400 ~e~i~~~~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~w~~~~~~~~~~~~~~~~~~~  471 (473)
                      .|++.+        |+++++++|.+++++    ++.+++|++++++..   +.|+|+...++ +..+++++..++
T Consensus       502 ~e~v~~--------~~~~la~~i~~l~~~----~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~~~y~~~~~~~  563 (568)
T 2vsy_A          502 DEMNVA--------DDAAFVAKAVALASD----PAALTALHARVDVLRRASGVFHMDGFADD-FGALLQALARRH  563 (568)
T ss_dssp             GGGBCS--------SHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHSSTTCHHHHHHH-HHHHHHHHHHTT
T ss_pred             hhhhcC--------CHHHHHHHHHHHhcC----HHHHHHHHHHHHHhhhcCCCCCHHHHHHH-HHHHHHHHHHHH
Confidence            887754        899999999999995    899999999998876   67999887766 455666665543

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*

Probab=99.92  E-value=8.3e-24  Score=214.44  Aligned_cols=258  Identities=12%  Similarity=0.050  Sum_probs=186.2

Q ss_pred             hhCCCCEEEEeCCCchhHHHHHHHHHhh--CCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCH
Q 011979           98 KIASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ  175 (473)
Q Consensus        98 ~~~~~Dvi~~~~p~~~~~~~~~~~~~~~--~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~  175 (473)
                      ...++|+|+++.|+.......+.++.++  +++|+|+.+||++...    .. .+.   .....|+.+++.||.|++.|+
T Consensus        71 ~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~----~~-~~~---~~~~~E~~~y~~aD~Ii~~S~  142 (339)
T 3rhz_A           71 GLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLM----FS-GNF---YLMDRTIAYYNKADVVVAPSQ  142 (339)
T ss_dssp             TCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHH----CG-GGG---GGHHHHHHHHTTCSEEEESCH
T ss_pred             cCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhh----Cc-cch---hhHHHHHHHHHHCCEEEECCH
Confidence            4578999999999864333223344443  3899999999995311    11 111   122469999999999999999


Q ss_pred             HHHHHHHHHhCCc-eEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccC
Q 011979          176 AMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK  254 (473)
Q Consensus       176 ~~~~~l~~~~g~~-~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (473)
                      .+++.+.+ .|.+ ..+++.+..+...+.+.                                              . .
T Consensus       143 ~~~~~l~~-~G~~~~ki~~~~~~~~~~~~~~----------------------------------------------~-~  174 (339)
T 3rhz_A          143 KMIDKLRD-FGMNVSKTVVQGMWDHPTQAPM----------------------------------------------F-P  174 (339)
T ss_dssp             HHHHHHHH-TTCCCSEEEECCSCCCCCCCCC----------------------------------------------C-C
T ss_pred             HHHHHHHH-cCCCcCceeecCCCCccCcccc----------------------------------------------c-c
Confidence            99999987 4766 34443321100000000                                              0 1


Q ss_pred             CCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHH
Q 011979          255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK  334 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~  334 (473)
                      +.....++|+|+++....       +..+                              .++++|+|+|+|++.      
T Consensus       175 ~~~~~~i~yaG~l~k~~~-------L~~l------------------------------~~~~~f~ivG~G~~~------  211 (339)
T 3rhz_A          175 AGLKREIHFPGNPERFSF-------VKEW------------------------------KYDIPLKVYTWQNVE------  211 (339)
T ss_dssp             CEEEEEEEECSCTTTCGG-------GGGC------------------------------CCSSCEEEEESCCCC------
T ss_pred             cCCCcEEEEeCCcchhhH-------HHhC------------------------------CCCCeEEEEeCCccc------
Confidence            112238999999984211       1111                              268999999999874      


Q ss_pred             HHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCC-C----CCCCcHHHHHHHhcCCcEEEeccCccccceecCCce
Q 011979          335 IRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-S----GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG  409 (473)
Q Consensus       335 ~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s-~----~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G  409 (473)
                        +  ++||.|+|. +|.++++.+++.+|+++++ .+. .    ...+|.|++||||||+|||+++.++..+++.++++|
T Consensus       212 --~--l~nV~f~G~-~~~~el~~~l~~~~~~lv~-~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G  285 (339)
T 3rhz_A          212 --L--PQNVHKINY-RPDEQLLMEMSQGGFGLVW-MDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLG  285 (339)
T ss_dssp             --C--CTTEEEEEC-CCHHHHHHHHHTEEEEECC-CCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCE
T ss_pred             --C--cCCEEEeCC-CCHHHHHHHHHhCCEEEEE-CCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeE
Confidence              1  349999998 9999999999999999985 111 1    146799999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Q 011979          410 LLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITE  466 (473)
Q Consensus       410 ~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  466 (473)
                      +++++.++++++|..+.      ++.+++|++|+++.++.++|..--++.+.+.+.+
T Consensus       286 ~~~~~~~e~~~~i~~l~------~~~~~~m~~na~~~a~~~~~~~f~k~~l~~~~~~  336 (339)
T 3rhz_A          286 WIVKDVEEAIMKVKNVN------EDEYIELVKNVRSFNPILRKGFFTRRLLTESVFQ  336 (339)
T ss_dssp             EEESSHHHHHHHHHHCC------HHHHHHHHHHHHHHTHHHHTTHHHHHHHHHHHHH
T ss_pred             EEeCCHHHHHHHHHHhC------HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence            99999999999998762      5679999999999888888877766666554433

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*

Probab=99.92  E-value=6e-23  Score=221.18  Aligned_cols=327  Identities=17%  Similarity=0.093  Sum_probs=209.4

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHh-hCCCeEEEEecCchhhhh-h--hh------cCCCch----H---HHHHHHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLL-S--LS------LGRRSH----F---VSIYRWIEKY  162 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~-~--~~------~~~~~~----~---~~~~~~~e~~  162 (473)
                      ..||++|+|.   +.+..+..+++. ..++|.|+++|...+.-. .  ..      +.....    .   ..-...+|+.
T Consensus       180 ~~pdIiH~HD---W~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKa  256 (725)
T 3nb0_A          180 QHAIVAHFHE---WLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERA  256 (725)
T ss_dssp             SEEEEEEEES---GGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHH
T ss_pred             CCCcEEEeCc---hhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHH
Confidence            4589999999   555544555543 568999999999831000 0  00      000000    0   0112456888


Q ss_pred             HhhcCCEEEEcCHHHHHHHHHHhCCc-eEEeeCC-CCCCcccCCh--hHHHHHHHhhhhhccCCCCcccccCCCcCCCCc
Q 011979          163 YGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSL--EEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA  238 (473)
Q Consensus       163 ~~~~ad~vi~vS~~~~~~l~~~~g~~-~~vi~n~-~~~~f~~~~~--~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  238 (473)
                      ....||.++|||+.++++++..++.+ -.+|+|| +.+.|.|...  +.+.+-+.++...+                   
T Consensus       257 ga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~iIpNGID~~~f~p~~~~~~~k~~aK~klq~~l-------------------  317 (725)
T 3nb0_A          257 AAHSADVFTTVSQITAFEAEHLLKRKPDGILPNGLNVIKFQAFHEFQNLHALKKEKINDFV-------------------  317 (725)
T ss_dssp             HHHHSSEEEESSHHHHHHHHHHTSSCCSEECCCCBCCCCCSSTTHHHHHHHHHHHHHHHHH-------------------
T ss_pred             HHHhCCEEEECCHHHHHHHHHHhcCCCCEEEcCCccccccCcchhhHHHHHHHHHHHHHHH-------------------
Confidence            88899999999999999999877766 3459999 5578877521  12222222221100                   


Q ss_pred             cchhhhcccccccccCCCCCeEEEEEeecc-CCCCHHHHHHHHHHhHHHHHhh----------hccCCCc----------
Q 011979          239 DETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAI----------LNEDDST----------  297 (473)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~-~~K~~~~li~a~~~l~~~~~~~----------~~~~~~~----------  297 (473)
                       ..+|.    +.+.+++++..+++.+||+. .+||++.+++|+..+..+++..          +--++..          
T Consensus       318 -~~~~~----~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~  392 (725)
T 3nb0_A          318 -RGHFH----GCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQ  392 (725)
T ss_dssp             -HHHTT----TCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHH
T ss_pred             -Hhhcc----cCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcch
Confidence             00000    01123334444677789999 6899999999999998763211          0001100          


Q ss_pred             ---------------------------------------hhh--------HHHhhhc-----cCccccCCCEEEEEEcCC
Q 011979          298 ---------------------------------------NEE--------VFLKEIS-----DGKQYLYPRLLFIITGKG  325 (473)
Q Consensus       298 ---------------------------------------~~~--------~~~~~~~-----~~~~~~~~~~~l~ivG~g  325 (473)
                                                             +.+        |.+|.|.     ...+ ..|=+.=.++-  
T Consensus       393 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~-lpp~~TH~~~~--  469 (725)
T 3nb0_A          393 AEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQ-LPPIVTHNMVD--  469 (725)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTC-CCCSBSEEETT--
T ss_pred             hHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCC-CCCeeeeeccc--
Confidence                                                   000        1111110     0000 01111111211  


Q ss_pred             CChHHHHHHHHHcCC-Cc------EEEecCCCCcc------cHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEE
Q 011979          326 PDKESYEEKIRRLRL-KR------VAFRTMWLSAE------DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC  392 (473)
Q Consensus       326 ~~~~~l~~~~~~~~l-~~------V~~~g~~v~~~------~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI  392 (473)
                      ...+.+...++++++ ++      |.|++.|++..      ++..+|+.||++|+   ||..|+||++++||||||+|||
T Consensus       470 ~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~---PS~~EgfGl~~LEAmA~G~PvI  546 (725)
T 3nb0_A          470 DANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVF---PSYYEPWGYTPAECTVMGVPSI  546 (725)
T ss_dssp             GGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEEC---CCSSBSSCHHHHHHHHTTCCEE
T ss_pred             CCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEe---ccccCCCCHHHHHHHHcCCCEE
Confidence            224567788888888 33      78888889876      59999999999999   7999999999999999999999


Q ss_pred             EeccCccccceecC-------CceEEeC-----CHHHHHHHH----HHHHhCCCCCHHHHHHHHHHHHHhccccchHHHH
Q 011979          393 AVSYSCIEELVKVD-------KNGLLFS-----SSSELADQL----LMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW  456 (473)
Q Consensus       393 ~~~~~~~~e~i~~~-------~~G~~~~-----~~~~la~~i----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~  456 (473)
                      +|+.+|..++|.++       .+|+++.     |+++++++|    ..+++.   ++..+.+|++++++.++.++|+...
T Consensus       547 ~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~---d~~~r~~mr~~ar~~A~~FSWe~iA  623 (725)
T 3nb0_A          547 TTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKK---TRRQRINQRNATEALSDLLDWKRMG  623 (725)
T ss_dssp             EETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTC---CHHHHHHHHHHHHHGGGGGBHHHHH
T ss_pred             EeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHhCCHHHHH
Confidence            99999999998875       3698772     455555444    444443   5788899999999988899999988


Q ss_pred             HHHHHH
Q 011979          457 EEHAKP  462 (473)
Q Consensus       457 ~~~~~~  462 (473)
                      +++++.
T Consensus       624 ~~Yl~~  629 (725)
T 3nb0_A          624 LEYVKA  629 (725)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            886643

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8

Probab=99.92  E-value=3.8e-24  Score=198.17  Aligned_cols=151  Identities=20%  Similarity=0.266  Sum_probs=139.7

Q ss_pred             EEEEEeecc-CCCCHHHHHHHHHHhH--HHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCC--ChHHHHHH
Q 011979          260 LVVSSTSWT-PDEDFGILLEAALMYD--RRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEK  334 (473)
Q Consensus       260 ~i~~~G~~~-~~K~~~~li~a~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~--~~~~l~~~  334 (473)
                      +++|+|++. +.||++.+++|+..+.  +                           ..|+++|+|+|.|+  ..+.+++.
T Consensus        38 ~i~~~G~~~~~~K~~~~li~a~~~l~~~~---------------------------~~~~~~l~i~G~~~~~~~~~l~~~   90 (200)
T 2bfw_A           38 TFMFIGRFDRGQKGVDVLLKAIEILSSKK---------------------------EFQEMRFIIIGKGDPELEGWARSL   90 (200)
T ss_dssp             EEEEESCBCSSSSCHHHHHHHHHHHTTSG---------------------------GGGGEEEEEECCBCHHHHHHHHHH
T ss_pred             EEEEeeccccccCCHHHHHHHHHHHHhhc---------------------------cCCCeEEEEECCCChHHHHHHHHH
Confidence            899999999 9999999999999985  4                           25789999999998  78889999


Q ss_pred             HHHcCCCcEEE-ecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC
Q 011979          335 IRRLRLKRVAF-RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS  413 (473)
Q Consensus       335 ~~~~~l~~V~~-~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~  413 (473)
                      +++++  +|.| +|. ++.+++..+|+.||++|+   +|..|++|++++|||+||+|||+++.++..+++ ++.+|++++
T Consensus        91 ~~~~~--~v~~~~g~-~~~~~~~~~~~~ad~~l~---ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~-~~~~g~~~~  163 (200)
T 2bfw_A           91 EEKHG--NVKVITEM-LSREFVRELYGSVDFVII---PSYFEPFGLVALEAMCLGAIPIASAVGGLRDII-TNETGILVK  163 (200)
T ss_dssp             HHHCT--TEEEECSC-CCHHHHHHHHTTCSEEEE---CCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC-CTTTCEEEC
T ss_pred             HHhcC--CEEEEecc-CCHHHHHHHHHHCCEEEE---CCCCCCccHHHHHHHHCCCCEEEeCCCChHHHc-CCCceEEec
Confidence            99988  9999 988 999999999999999999   677799999999999999999999999999999 899999997


Q ss_pred             --CHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHhcc
Q 011979          414 --SSSELADQLLMLFK-GFPDDSDVLKKLRNGTLEMGL  448 (473)
Q Consensus       414 --~~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~  448 (473)
                        |+++++++|.++++ +    ++.+++|++++++..+
T Consensus       164 ~~~~~~l~~~i~~l~~~~----~~~~~~~~~~a~~~~~  197 (200)
T 2bfw_A          164 AGDPGELANAILKALELS----RSDLSKFRENCKKRAM  197 (200)
T ss_dssp             TTCHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHH
Confidence              79999999999999 6    8999999999998663

>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*

Probab=99.90  E-value=2.6e-22  Score=212.62  Aligned_cols=276  Identities=9%  Similarity=-0.002  Sum_probs=186.6

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHh-hCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      ..+|+||+|++....   +...++. ..++|+++++|........  +.. -+...   .+-+. ...+|.+...+....
T Consensus       122 ~~~DiV~vHdyhl~~---l~~~lr~~~~~~~i~~~~H~pfp~~~~--~~~-lp~~~---~il~~-ll~~d~i~f~~~~~~  191 (482)
T 1uqt_A          122 QDDDIIWIHDYHLLP---FAHELRKRGVNNRIGFFLHIPFPTPEI--FNA-LPTYD---TLLEQ-LCDYDLLGFQTENDR  191 (482)
T ss_dssp             CTTCEEEEESGGGTT---HHHHHHHTTCCSCEEEECCSCCCCHHH--HTT-STTHH---HHHHH-HTTSSEEEESSHHHH
T ss_pred             CCCCEEEEECchHHH---HHHHHHHhCCCCcEEEEEcCCCCCHHH--Hhh-CccHH---HHHHh-hhccCeEEEECHHHH
Confidence            567999999853322   3344444 4479999999986311100  000 01100   11111 124677776666554


Q ss_pred             HHHHH-----------------HhCC--ceEEeeCCCC-CCcccCC----hhHHHHHHHhhhhhccCCCCcccccCCCcC
Q 011979          179 HELAQ-----------------NWGI--KATVLYDQPP-EFFHPTS----LEEKHELFCRLNKILHQPLGVQDCVSNGME  234 (473)
Q Consensus       179 ~~l~~-----------------~~g~--~~~vi~n~~~-~~f~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  234 (473)
                      ..+..                 .+|.  ++.++|+|.+ +.|.+..    ..+..+++.+++                  
T Consensus       192 ~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~------------------  253 (482)
T 1uqt_A          192 LAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELK------------------  253 (482)
T ss_dssp             HHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTT------------------
T ss_pred             HHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhC------------------
Confidence            44432                 1232  3788899854 5554321    001334444432                  


Q ss_pred             CCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccC
Q 011979          235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY  314 (473)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (473)
                                           +++ +++++||+.+.||++.+++|+..+.++                           +
T Consensus       254 ---------------------~~~-vil~VgRl~~~Kgi~~ll~A~~~ll~~---------------------------~  284 (482)
T 1uqt_A          254 ---------------------NVQ-NIFSVERLDYSKGLPERFLAYEALLEK---------------------------Y  284 (482)
T ss_dssp             ---------------------TCE-EEEEECCBCGGGCHHHHHHHHHHHHHH---------------------------C
T ss_pred             ---------------------CCE-EEEEEeCCcccCCHHHHHHHHHHHHHh---------------------------C
Confidence                                 123 899999999999999999999998763                           3


Q ss_pred             C----CEEEEEEcCC-----CC----hHHHHHHHHHcCC-------CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCC
Q 011979          315 P----RLLFIITGKG-----PD----KESYEEKIRRLRL-------KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG  374 (473)
Q Consensus       315 ~----~~~l~ivG~g-----~~----~~~l~~~~~~~~l-------~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~  374 (473)
                      |    +++|+++|.+     ++    .+++++++.+++.       ..|.++++.++.+++..+|+.||++|+   +|..
T Consensus       285 p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~---pS~~  361 (482)
T 1uqt_A          285 PQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLV---TPLR  361 (482)
T ss_dssp             GGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEE---CCSS
T ss_pred             ccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEE---CCCc
Confidence            3    4889999953     22    2334445544321       247765444999999999999999999   7999


Q ss_pred             CCCcHHHHHHHhcCC-----cEEEeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          375 LDLPMKVVDMFGCGL-----PVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       375 e~~p~kv~Eama~G~-----PvI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      |+||++++||||||+     |+|+|+.+|..+.+.   +|++++  |+++++++|.+++++   ++++++++.+++++.+
T Consensus       362 EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~---~g~lv~p~d~~~lA~ai~~lL~~---~~~~r~~~~~~~~~~v  435 (482)
T 1uqt_A          362 DGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDEVAAALDRALTM---SLAERISRHAEMLDVI  435 (482)
T ss_dssp             BSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTCHHHHHHHHHHHHTC---CHHHHHHHHHHHHHHH
T ss_pred             ccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC---CeEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHH
Confidence            999999999999997     999999888777772   789986  799999999999986   5778889999998888


Q ss_pred             cccchHHHHHHHHH
Q 011979          448 LSARWATEWEEHAK  461 (473)
Q Consensus       448 ~~~~w~~~~~~~~~  461 (473)
                      ..++|+.-.++.+.
T Consensus       436 ~~~s~~~~a~~~l~  449 (482)
T 1uqt_A          436 VKNDINHWQECFIS  449 (482)
T ss_dssp             HHTCHHHHHHHHHH
T ss_pred             HhCCHHHHHHHHHH
Confidence            77888654454443

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3

Probab=99.90  E-value=1.4e-22  Score=205.73  Aligned_cols=268  Identities=15%  Similarity=0.069  Sum_probs=181.3

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      ..+||+||++++...  ...+.++++..++|+++..++...      ......+.  .....+.+.+.+|.++++|+..+
T Consensus        89 ~~~pDvv~~~~~~~~--~~~~~~~a~~~~ip~v~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~s~~~~  158 (376)
T 1v4v_A           89 EMGADYVLVHGDTLT--TFAVAWAAFLEGIPVGHVEAGLRS------GNLKEPFP--EEANRRLTDVLTDLDFAPTPLAK  158 (376)
T ss_dssp             HTTCSEEEEESSCHH--HHHHHHHHHHTTCCEEEETCCCCC------SCTTSSTT--HHHHHHHHHHHCSEEEESSHHHH
T ss_pred             HcCCCEEEEeCChHH--HHHHHHHHHHhCCCEEEEeCCCcc------ccccCCCc--hHHHHHHHHHHhceeeCCCHHHH
Confidence            378999999975322  223456677788998754443310      00001110  11234455667999999999999


Q ss_pred             HHHHHHhCCc---eEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCC
Q 011979          179 HELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP  255 (473)
Q Consensus       179 ~~l~~~~g~~---~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (473)
                      +.+.+ .|.+   +.+++|+..+.+..      ..-...+.                                .  .+ +
T Consensus       159 ~~l~~-~g~~~~ki~vi~n~~~d~~~~------~~~~~~~~--------------------------------~--~~-~  196 (376)
T 1v4v_A          159 ANLLK-EGKREEGILVTGQTGVDAVLL------AAKLGRLP--------------------------------E--GL-P  196 (376)
T ss_dssp             HHHHT-TTCCGGGEEECCCHHHHHHHH------HHHHCCCC--------------------------------T--TC-C
T ss_pred             HHHHH-cCCCcceEEEECCchHHHHhh------hhhhhHHH--------------------------------H--hc-C
Confidence            98876 4664   56666542111100      00000000                                0  11 1


Q ss_pred             CCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEE-cCCC-ChHHHHH
Q 011979          256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP-DKESYEE  333 (473)
Q Consensus       256 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv-G~g~-~~~~l~~  333 (473)
                      +++.+++++||+...|+++.+++|+..+.++                           .|+++++++ |+|+ ..+.+++
T Consensus       197 ~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~lv~~~g~~~~~~~~l~~  249 (376)
T 1v4v_A          197 EGPYVTVTMHRRENWPLLSDLAQALKRVAEA---------------------------FPHLTFVYPVHLNPVVREAVFP  249 (376)
T ss_dssp             SSCEEEECCCCGGGGGGHHHHHHHHHHHHHH---------------------------CTTSEEEEECCSCHHHHHHHHH
T ss_pred             CCCEEEEEeCcccchHHHHHHHHHHHHHHhh---------------------------CCCeEEEEECCCCHHHHHHHHH
Confidence            3455778899998888999999999998763                           578888886 7665 3455555


Q ss_pred             HHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe-ccCccccceecCCceEEe
Q 011979          334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKVDKNGLLF  412 (473)
Q Consensus       334 ~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~-~~~~~~e~i~~~~~G~~~  412 (473)
                      .++.  .++|.|+|. ++..++..+|+.||++|.   +|  +  ++ ++|||+||+|||++ +.++..+++.. ++|+++
T Consensus       250 ~~~~--~~~v~~~g~-~g~~~~~~~~~~ad~~v~---~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~-g~g~lv  317 (376)
T 1v4v_A          250 VLKG--VRNFVLLDP-LEYGSMAALMRASLLLVT---DS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKA-GILKLA  317 (376)
T ss_dssp             HHTT--CTTEEEECC-CCHHHHHHHHHTEEEEEE---SC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHH-TSEEEC
T ss_pred             Hhcc--CCCEEEECC-CCHHHHHHHHHhCcEEEE---CC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcC-CceEEC
Confidence            5432  368999987 777899999999999998   45  2  33 78999999999998 46888887754 589999


Q ss_pred             -CCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Q 011979          413 -SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLIT  465 (473)
Q Consensus       413 -~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~  465 (473)
                       .|+++++++|.+++++    ++.+++|++++    ..+.|...++++++.+.+
T Consensus       318 ~~d~~~la~~i~~ll~d----~~~~~~~~~~~----~~~~~~~~~~~i~~~i~~  363 (376)
T 1v4v_A          318 GTDPEGVYRVVKGLLEN----PEELSRMRKAK----NPYGDGKAGLMVARGVAW  363 (376)
T ss_dssp             CSCHHHHHHHHHHHHTC----HHHHHHHHHSC----CSSCCSCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhC----hHhhhhhcccC----CCCCCChHHHHHHHHHHH
Confidence             5899999999999985    88889898643    356677777777665544

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8

Probab=99.90  E-value=2.1e-23  Score=190.91  Aligned_cols=154  Identities=21%  Similarity=0.199  Sum_probs=137.2

Q ss_pred             ccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHH
Q 011979          252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY  331 (473)
Q Consensus       252 ~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l  331 (473)
                      .++.+++ +++|+|++.+.||++.+++|+..+                               ++++|+|+|.|+..+.+
T Consensus        18 ~~~~~~~-~i~~~G~~~~~Kg~~~li~a~~~l-------------------------------~~~~l~i~G~~~~~~~l   65 (177)
T 2f9f_A           18 KFKCYGD-FWLSVNRIYPEKRIELQLEVFKKL-------------------------------QDEKLYIVGWFSKGDHA   65 (177)
T ss_dssp             CCCCCCS-CEEEECCSSGGGTHHHHHHHHHHC-------------------------------TTSCEEEEBCCCTTSTH
T ss_pred             ccCCCCC-EEEEEeccccccCHHHHHHHHHhC-------------------------------CCcEEEEEecCccHHHH
Confidence            5666666 899999999999999999999885                               57899999999988889


Q ss_pred             HHHHH--HcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCc
Q 011979          332 EEKIR--RLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKN  408 (473)
Q Consensus       332 ~~~~~--~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~  408 (473)
                      ++.++  .+++ ++|.|+|. ++.+++..+|+.||++|+   ++..|++|++++|||+||+|||+++.++..+++.++.+
T Consensus        66 ~~~~~~~~~~l~~~v~~~g~-~~~~e~~~~~~~adi~v~---ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~  141 (177)
T 2f9f_A           66 ERYARKIMKIAPDNVKFLGS-VSEEELIDLYSRCKGLLC---TAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKT  141 (177)
T ss_dssp             HHHHHHHHHHSCTTEEEEES-CCHHHHHHHHHHCSEEEE---CCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTT
T ss_pred             HHHHHhhhcccCCcEEEeCC-CCHHHHHHHHHhCCEEEe---CCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCc
Confidence            99999  7788 79999998 999999999999999999   67789999999999999999999999999999999999


Q ss_pred             eEEe-CCHHHHHHHHHHHHhCCCCCHHH-HHHHHHHHHH
Q 011979          409 GLLF-SSSSELADQLLMLFKGFPDDSDV-LKKLRNGTLE  445 (473)
Q Consensus       409 G~~~-~~~~~la~~i~~l~~~~~~~~~~-~~~~~~~~~~  445 (473)
                      |+++ .|+++++++|.+++++    ++. ++++++++++
T Consensus       142 g~~~~~d~~~l~~~i~~l~~~----~~~~~~~~~~~a~~  176 (177)
T 2f9f_A          142 GYLVNADVNEIIDAMKKVSKN----PDKFKKDCFRRAKE  176 (177)
T ss_dssp             EEEECSCHHHHHHHHHHHHHC----TTTTHHHHHHHHHT
T ss_pred             cEEeCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHhc
Confidence            9998 5799999999999986    333 6666666654

>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*

Probab=99.89  E-value=8.6e-22  Score=201.96  Aligned_cols=236  Identities=17%  Similarity=0.136  Sum_probs=170.6

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH  179 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~  179 (473)
                      .+||+++++....++...     ....+ |+++..+.+         ...+        +.+.+.+.+|.++++|+..++
T Consensus       110 ~~pDiv~~~~~~~~~~~~-----~~~~~-p~~~~~~~~---------~~~~--------~~~~~~~~~d~ii~~S~~~~~  166 (374)
T 2xci_A          110 SKPKALIVVEREFWPSLI-----IFTKV-PKILVNAYA---------KGSL--------IEKILSKKFDLIIMRTQEDVE  166 (374)
T ss_dssp             HCCSEEEEESCCCCHHHH-----HHCCS-CEEEEEECC---------CCCH--------HHHHHHTTCSEEEESCHHHHH
T ss_pred             hCCCEEEEECccCcHHHH-----HHHhC-CEEEEEeec---------CchH--------HHHHHHHhCCEEEECCHHHHH
Confidence            689999987655455431     22233 766543332         1111        345566789999999999999


Q ss_pred             HHHHHhCCc-eEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCC
Q 011979          180 ELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRP  258 (473)
Q Consensus       180 ~l~~~~g~~-~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (473)
                      .+.+ +|.+ +.+++|+.   |.+.... +.                                          .+  ..+
T Consensus       167 ~l~~-~g~~ki~vi~n~~---f~~~~~~-~~------------------------------------------~l--~~~  197 (374)
T 2xci_A          167 KFKT-FGAKRVFSCGNLK---FICQKGK-GI------------------------------------------KL--KGE  197 (374)
T ss_dssp             HHHT-TTCCSEEECCCGG---GCCCCCS-CC------------------------------------------CC--SSC
T ss_pred             HHHH-cCCCeEEEcCCCc---cCCCcCh-hh------------------------------------------hh--cCC
Confidence            9977 4764 77777651   2211100 00                                          01  113


Q ss_pred             eEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh-HHHHHHHHH
Q 011979          259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEEKIRR  337 (473)
Q Consensus       259 ~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-~~l~~~~~~  337 (473)
                       +++++|+.  .|+++.+++|+..+.+                           ..|+++|+|+|+|+.+ +++++++++
T Consensus       198 -vi~~~~~~--~k~~~~ll~A~~~l~~---------------------------~~p~~~lvivG~g~~~~~~l~~~~~~  247 (374)
T 2xci_A          198 -FIVAGSIH--TGEVEIILKAFKEIKK---------------------------TYSSLKLILVPRHIENAKIFEKKARD  247 (374)
T ss_dssp             -EEEEEEEC--GGGHHHHHHHHHHHHT---------------------------TCTTCEEEEEESSGGGHHHHHHHHHH
T ss_pred             -EEEEEeCC--CchHHHHHHHHHHHHh---------------------------hCCCcEEEEECCCHHHHHHHHHHHHH
Confidence             56666653  5899999999999876                           3689999999999876 589999999


Q ss_pred             cCCC---------cEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe-ccCccccceecC-
Q 011979          338 LRLK---------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKVD-  406 (473)
Q Consensus       338 ~~l~---------~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~-~~~~~~e~i~~~-  406 (473)
                      +++.         +|.+.|.   .+|+..+|+.||++++|  +|..+.+|++++||||||+|||++ +.++..|++.+. 
T Consensus       248 ~gl~~~~~~~~~~~v~~~~~---~~dl~~~y~~aDv~vl~--ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~  322 (374)
T 2xci_A          248 FGFKTSFFENLEGDVILVDR---FGILKELYPVGKIAIVG--GTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLE  322 (374)
T ss_dssp             TTCCEEETTCCCSSEEECCS---SSCHHHHGGGEEEEEEC--SSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHH
T ss_pred             CCCceEEecCCCCcEEEECC---HHHHHHHHHhCCEEEEC--CcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHH
Confidence            9874         5777776   69999999999999984  345566889999999999999986 678888877542 


Q ss_pred             CceE--EeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          407 KNGL--LFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       407 ~~G~--~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      .+|+  .+.|+++|+++|.++++    | +.+++|++++++..
T Consensus       323 ~~G~l~~~~d~~~La~ai~~ll~----d-~~r~~mg~~ar~~~  360 (374)
T 2xci_A          323 KEGAGFEVKNETELVTKLTELLS----V-KKEIKVEEKSREIK  360 (374)
T ss_dssp             HTTCEEECCSHHHHHHHHHHHHH----S-CCCCCHHHHHHHHH
T ss_pred             HCCCEEEeCCHHHHHHHHHHHHh----H-HHHHHHHHHHHHHH
Confidence            2444  44689999999999998    5 56788999998865

>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*

Probab=99.85  E-value=6.8e-19  Score=185.73  Aligned_cols=268  Identities=10%  Similarity=-0.042  Sum_probs=184.0

Q ss_pred             CCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHHH
Q 011979          101 SPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE  180 (473)
Q Consensus       101 ~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~  180 (473)
                      ..|+|++|+++.++..  ..+-....+.++.+.+|-......-  + +.-+.. ....+-+- ...+|.|..-+......
T Consensus       149 ~~D~VwVhDYhL~llp--~~lR~~~~~~~igfFlHiPfPs~e~--f-~~Lp~~-~r~ell~g-ll~~DligF~t~~y~~~  221 (496)
T 3t5t_A          149 ADPVYLVHDYQLVGVP--ALLREQRPDAPILLFVHIPWPSADY--W-RILPKE-IRTGILHG-MLPATTIGFFADRWCRN  221 (496)
T ss_dssp             SSCEEEEESGGGTTHH--HHHHHHCTTSCEEEECCSCCCCHHH--H-TTSCHH-HHHHHHHH-HTTSSEEEESSHHHHHH
T ss_pred             CCCEEEEeCccHhHHH--HHHHhhCCCCeEEEEEcCCCCCHHH--H-hhCcHh-HHHHHHHH-HHhCCEEEEecHHHHHH
Confidence            5789999996554433  3333345678999999987311110  0 111100 00111122 23689999999987765


Q ss_pred             HHHH----h-CC----------------ceEEeeCC-CCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCc
Q 011979          181 LAQN----W-GI----------------KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA  238 (473)
Q Consensus       181 l~~~----~-g~----------------~~~vi~n~-~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  238 (473)
                      +.+.    . |.                ++.++|+| +++.|.+...+.+.+++++++                      
T Consensus       222 Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~----------------------  279 (496)
T 3t5t_A          222 FLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWAD----------------------  279 (496)
T ss_dssp             HHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHT----------------------
T ss_pred             HHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhC----------------------
Confidence            4432    2 31                25678888 446676543222234444433                      


Q ss_pred             cchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCC--
Q 011979          239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR--  316 (473)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  316 (473)
                                       ++ .+++++||+.+.||++.+++|+ .+.++                           +|+  
T Consensus       280 -----------------~~-~lIl~VgRLd~~KGi~~lL~Af-~ll~~---------------------------~P~~~  313 (496)
T 3t5t_A          280 -----------------GH-RLVVHSGRTDPIKNAERAVRAF-VLAAR---------------------------GGGLE  313 (496)
T ss_dssp             -----------------TS-EEEEEEEESSGGGCHHHHHHHH-HHHHH---------------------------TSSCT
T ss_pred             -----------------Cc-eEEEEcccCccccCHHHHHHHH-HHHHh---------------------------Ccccc
Confidence                             12 2899999999999999999999 76653                           454  


Q ss_pred             -EEEEEEcC-----CCChHH----HHHHHHHcCC----CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHH
Q 011979          317 -LLFIITGK-----GPDKES----YEEKIRRLRL----KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVV  382 (473)
Q Consensus       317 -~~l~ivG~-----g~~~~~----l~~~~~~~~l----~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~  382 (473)
                       +.|+++|.     |++.+.    +++++.+++.    ..|.|+|. ++.+++..+|+.||++|+   +|..|+||++.+
T Consensus       314 ~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~-v~~~el~aly~~ADv~vv---~SlrEGfgLv~~  389 (496)
T 3t5t_A          314 KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDND-NDVNHTIACFRRADLLIF---NSTVDGQNLSTF  389 (496)
T ss_dssp             TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEC-CCHHHHHHHHHHCSEEEE---CCSSBSCCSHHH
T ss_pred             eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCC-CCHHHHHHHHHhccEEEE---CcccccCChhHH
Confidence             67888863     333233    4444444432    26999998 999999999999999999   899999999999


Q ss_pred             HHHhcC---CcEEEeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccch
Q 011979          383 DMFGCG---LPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARW  452 (473)
Q Consensus       383 Eama~G---~PvI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w  452 (473)
                      ||||||   .|+|.|..+|..+.+.  .+|++++  |++++|++|.+++++   ++++++++.+..++.+..+++
T Consensus       390 EamA~~~~~g~lVlSe~aGa~~~l~--~~allVnP~D~~~lA~AI~~aL~m---~~~er~~r~~~~~~~V~~~d~  459 (496)
T 3t5t_A          390 EAPLVNERDADVILSETCGAAEVLG--EYCRSVNPFDLVEQAEAISAALAA---GPRQRAEAAARRRDAARPWTL  459 (496)
T ss_dssp             HHHHHCSSCCEEEEETTBTTHHHHG--GGSEEECTTBHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHTTCBH
T ss_pred             HHHHhCCCCCCEEEeCCCCCHHHhC--CCEEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHCCH
Confidence            999997   8999999888888773  4789996  799999999999997   577888888888888866654

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=99.82  E-value=9.9e-19  Score=179.31  Aligned_cols=340  Identities=13%  Similarity=0.039  Sum_probs=206.8

Q ss_pred             CCeEEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeec-------------CCC---C
Q 011979            4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ-------------WPT---I   67 (473)
Q Consensus         4 ~~~~~i~~~~~~g~s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~-------------~~~---~   67 (473)
                      ++|++++..+..|+..++...+..|.++ ||+|++++...   ........|+.++.++.             ...   +
T Consensus        20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~-GheV~v~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (412)
T 3otg_A           20 HMRVLFASLGTHGHTYPLLPLATAARAA-GHEVTFATGEG---FAGTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPE   95 (412)
T ss_dssp             SCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECGG---GHHHHHHTTCEEEECCCCHHHHHHHHHHHHHSCSCCT
T ss_pred             eeEEEEEcCCCcccHHHHHHHHHHHHHC-CCEEEEEccHH---HHHHHHhcCCceeecCcccccchhhhhhhhhcccCCc
Confidence            3456666666556666777788888887 99999999642   12344456888888872             000   0


Q ss_pred             CCCCcc-hhHHHHHHHHH-HHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhh
Q 011979           68 PRGLPK-VLKPVLLLLKP-LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLS  145 (473)
Q Consensus        68 ~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~  145 (473)
                      ...... .......+... ......-+..++ +..+||+|+++... .    .+.++++..++|+|+..|+...      
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~~pDvVv~~~~~-~----~~~~aa~~~giP~v~~~~~~~~------  163 (412)
T 3otg_A           96 GLTPEQLSELPQIVFGRVIPQRVFDELQPVI-ERLRPDLVVQEISN-Y----GAGLAALKAGIPTICHGVGRDT------  163 (412)
T ss_dssp             TCCHHHHTTSHHHHHHTHHHHHHHHHHHHHH-HHHCCSEEEEETTC-H----HHHHHHHHHTCCEEEECCSCCC------
T ss_pred             cCChhHhhHHHHHHHhccchHHHHHHHHHHH-HhcCCCEEEECchh-h----HHHHHHHHcCCCEEEecccccC------
Confidence            000000 00111111111 000011122222 23689999988522 1    1446667778999998888731      


Q ss_pred             cCCCchHHHHHHHHHHHHhh------------cCCEEEEcCHHHHHHHHHHhCCc-eEEeeCCCCCCcccCChhHHHHHH
Q 011979          146 LGRRSHFVSIYRWIEKYYGK------------MANGCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELF  212 (473)
Q Consensus       146 ~~~~~~~~~~~~~~e~~~~~------------~ad~vi~vS~~~~~~l~~~~g~~-~~vi~n~~~~~f~~~~~~~~~~l~  212 (473)
                        .......+.+++.+...+            .+|.+++.++...+......... ..+.+.....   ....   .   
T Consensus       164 --~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~---  232 (412)
T 3otg_A          164 --PDDLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRPVPFAE---QGDL---P---  232 (412)
T ss_dssp             --CSHHHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCTTEEECCCCCCCC---CCCC---C---
T ss_pred             --chhhhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCCCcceeeccCCCC---CCCC---C---
Confidence              111122333333333332            56778888877665555433222 1111111100   0000   0   


Q ss_pred             Hhh-hhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhh
Q 011979          213 CRL-NKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAIL  291 (473)
Q Consensus       213 ~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~  291 (473)
                       .+ +                                   ...++++.++++.|+.. .++.+.+.+++..+.+      
T Consensus       233 -~~~~-----------------------------------~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~------  269 (412)
T 3otg_A          233 -AWLS-----------------------------------SRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAG------  269 (412)
T ss_dssp             -GGGG-----------------------------------GSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHT------
T ss_pred             -Cccc-----------------------------------cccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHc------
Confidence             00 0                                   11345677888999996 7778888777777654      


Q ss_pred             ccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC-hHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEec
Q 011979          292 NEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLH  369 (473)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~-~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~  369 (473)
                                             .++++++++++.. .+.++      ++ ++|.+.|+ +   ++..+|..||++|.  
T Consensus       270 -----------------------~~~~~~~~~g~~~~~~~l~------~~~~~v~~~~~-~---~~~~~l~~ad~~v~--  314 (412)
T 3otg_A          270 -----------------------LDADVLVASGPSLDVSGLG------EVPANVRLESW-V---PQAALLPHVDLVVH--  314 (412)
T ss_dssp             -----------------------SSSEEEEECCSSCCCTTCC------CCCTTEEEESC-C---CHHHHGGGCSEEEE--
T ss_pred             -----------------------CCCEEEEEECCCCChhhhc------cCCCcEEEeCC-C---CHHHHHhcCcEEEE--
Confidence                                   2456666655433 33332      23 69999988 4   69999999999997  


Q ss_pred             cCCCCCCCcHHHHHHHhcCCcEEEeccC----ccccceecCCceEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 011979          370 TSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRN  441 (473)
Q Consensus       370 ~~s~~e~~p~kv~Eama~G~PvI~~~~~----~~~e~i~~~~~G~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~  441 (473)
                       .+ +   +++++|||++|+|+|+++.+    +..+.+.+.++|++++    |+++|+++|.+++++    ++.+++|++
T Consensus       315 -~~-g---~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~----~~~~~~~~~  385 (412)
T 3otg_A          315 -HG-G---SGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAE----ESYRAGARA  385 (412)
T ss_dssp             -SC-C---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHC----HHHHHHHHH
T ss_pred             -CC-c---hHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhC----HHHHHHHHH
Confidence             33 2   36999999999999997654    4677888888999985    689999999999995    899999999


Q ss_pred             HHHHhccccchHHHHH
Q 011979          442 GTLEMGLSARWATEWE  457 (473)
Q Consensus       442 ~~~~~~~~~~w~~~~~  457 (473)
                      .+++......|+...+
T Consensus       386 ~~~~~~~~~~~~~~~~  401 (412)
T 3otg_A          386 VAAEIAAMPGPDEVVR  401 (412)
T ss_dssp             HHHHHHHSCCHHHHHT
T ss_pred             HHHHHhcCCCHHHHHH
Confidence            9999887777655443

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=99.81  E-value=2.8e-18  Score=175.21  Aligned_cols=305  Identities=17%  Similarity=0.156  Sum_probs=184.4

Q ss_pred             HHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhCCCC
Q 011979           24 QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPD  103 (473)
Q Consensus        24 ~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D  103 (473)
                      .|..|.++ ||+|.++|.... .........|++++.++.......+.....+   ...+++..+... ..++ +..+||
T Consensus        22 la~~L~~~-g~~V~~vg~~~g-~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~l-~~~~PD   94 (365)
T 3s2u_A           22 CAREFQAR-GYAVHWLGTPRG-IENDLVPKAGLPLHLIQVSGLRGKGLKSLVK---APLELLKSLFQA-LRVI-RQLRPV   94 (365)
T ss_dssp             HHHHHHHT-TCEEEEEECSSS-THHHHTGGGTCCEEECC-----------------CHHHHHHHHHHH-HHHH-HHHCCS
T ss_pred             HHHHHHhC-CCEEEEEECCch-HhhchhhhcCCcEEEEECCCcCCCCHHHHHH---HHHHHHHHHHHH-HHHH-HhcCCC
Confidence            44455554 999999985432 2234455667888887732221111111111   112222211111 1222 337899


Q ss_pred             EEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHH
Q 011979          104 VFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ  183 (473)
Q Consensus       104 vi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~  183 (473)
                      +|+.+...  .+. .+.+++++.++|++++-++..       .+          ...+++.+.++.+.+..+....    
T Consensus        95 vVi~~g~~--~s~-p~~laA~~~~iP~vihe~n~~-------~G----------~~nr~l~~~a~~v~~~~~~~~~----  150 (365)
T 3s2u_A           95 CVLGLGGY--VTG-PGGLAARLNGVPLVIHEQNAV-------AG----------TANRSLAPIARRVCEAFPDTFP----  150 (365)
T ss_dssp             EEEECSSS--THH-HHHHHHHHTTCCEEEEECSSS-------CC----------HHHHHHGGGCSEEEESSTTSSC----
T ss_pred             EEEEcCCc--chH-HHHHHHHHcCCCEEEEecchh-------hh----------hHHHhhccccceeeeccccccc----
Confidence            99988742  222 355677788999998665551       11          2234566788988776553210    


Q ss_pred             HhCCceEEeeCCCC-CCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEE
Q 011979          184 NWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVV  262 (473)
Q Consensus       184 ~~g~~~~vi~n~~~-~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  262 (473)
                       ...+..+..+... +.+...                                            .....+.++++.+++
T Consensus       151 -~~~k~~~~g~pvr~~~~~~~--------------------------------------------~~~~~~~~~~~~ilv  185 (365)
T 3s2u_A          151 -ASDKRLTTGNPVRGELFLDA--------------------------------------------HARAPLTGRRVNLLV  185 (365)
T ss_dssp             -C---CEECCCCCCGGGCCCT--------------------------------------------TSSCCCTTSCCEEEE
T ss_pred             -CcCcEEEECCCCchhhccch--------------------------------------------hhhcccCCCCcEEEE
Confidence             0111222222211 111111                                            001134556777888


Q ss_pred             EEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEE-EcCCCChHHHHHHHHHcCCC
Q 011979          263 SSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKGPDKESYEEKIRRLRLK  341 (473)
Q Consensus       263 ~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i-vG~g~~~~~l~~~~~~~~l~  341 (473)
                      +.|+.+..+..+.+.+++..+..                            ..++.+++ +|.+ +.+.+.+..++.+. 
T Consensus       186 ~gGs~g~~~~~~~~~~al~~l~~----------------------------~~~~~vi~~~G~~-~~~~~~~~~~~~~~-  235 (365)
T 3s2u_A          186 LGGSLGAEPLNKLLPEALAQVPL----------------------------EIRPAIRHQAGRQ-HAEITAERYRTVAV-  235 (365)
T ss_dssp             CCTTTTCSHHHHHHHHHHHTSCT----------------------------TTCCEEEEECCTT-THHHHHHHHHHTTC-
T ss_pred             ECCcCCccccchhhHHHHHhccc----------------------------ccceEEEEecCcc-ccccccceeccccc-
Confidence            88999888888888888887743                            13444444 4543 45566667777664 


Q ss_pred             cEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCcc--------ccceecCCceEEeC
Q 011979          342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI--------EELVKVDKNGLLFS  413 (473)
Q Consensus       342 ~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~--------~e~i~~~~~G~~~~  413 (473)
                      ++.+.++   .++++++|..||++|+    ..|   ++++.|+|++|+|+|..+.+..        ++.+.+.+.|++++
T Consensus       236 ~~~v~~f---~~dm~~~l~~aDlvI~----raG---~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~  305 (365)
T 3s2u_A          236 EADVAPF---ISDMAAAYAWADLVIC----RAG---ALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLP  305 (365)
T ss_dssp             CCEEESC---CSCHHHHHHHCSEEEE----CCC---HHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECC
T ss_pred             ccccccc---hhhhhhhhccceEEEe----cCC---cchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEee
Confidence            6788888   6899999999999997    233   6799999999999998865432        24556667788874


Q ss_pred             ----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcc
Q 011979          414 ----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGL  448 (473)
Q Consensus       414 ----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~  448 (473)
                          ++++|+++|.++++|    ++.+++|++++++...
T Consensus       306 ~~~~~~~~L~~~i~~ll~d----~~~~~~m~~~a~~~~~  340 (365)
T 3s2u_A          306 QKSTGAAELAAQLSEVLMH----PETLRSMADQARSLAK  340 (365)
T ss_dssp             TTTCCHHHHHHHHHHHHHC----THHHHHHHHHHHHTCC
T ss_pred             cCCCCHHHHHHHHHHHHCC----HHHHHHHHHHHHhcCC
Confidence                488999999999995    8999999999998763

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}

Probab=99.80  E-value=7.4e-19  Score=181.56  Aligned_cols=269  Identities=14%  Similarity=0.112  Sum_probs=176.5

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchH-HHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      .+||+|++++....  ...+.++++..++|+++..++...      +....++ ...   ....+.+.+|.+++.|+..+
T Consensus       110 ~kPDvVi~~g~~~~--~~~~~~aa~~~~IPv~h~~ag~rs------~~~~~~~~~~~---~r~~~~~~a~~~~~~se~~~  178 (396)
T 3dzc_A          110 EQPDVVLVHGDTAT--TFAASLAAYYQQIPVGHVEAGLRT------GNIYSPWPEEG---NRKLTAALTQYHFAPTDTSR  178 (396)
T ss_dssp             HCCSEEEEETTSHH--HHHHHHHHHTTTCCEEEETCCCCC------SCTTSSTTHHH---HHHHHHHTCSEEEESSHHHH
T ss_pred             cCCCEEEEECCchh--HHHHHHHHHHhCCCEEEEECCccc------cccccCCcHHH---HHHHHHHhcCEEECCCHHHH
Confidence            78999999985432  223556778889997754333210      0111111 111   12233568999999999999


Q ss_pred             HHHHHHhCCc---eEEeeCCCCCCcccCChh------HHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccccc
Q 011979          179 HELAQNWGIK---ATVLYDQPPEFFHPTSLE------EKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGI  249 (473)
Q Consensus       179 ~~l~~~~g~~---~~vi~n~~~~~f~~~~~~------~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (473)
                      +.+.+ .|++   +.++.|...+.+......      .+.+++.+++                                 
T Consensus       179 ~~l~~-~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg---------------------------------  224 (396)
T 3dzc_A          179 ANLLQ-ENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFP---------------------------------  224 (396)
T ss_dssp             HHHHH-TTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCT---------------------------------
T ss_pred             HHHHH-cCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhC---------------------------------
Confidence            99887 5775   555554321211111000      0233444433                                 


Q ss_pred             ccccCCCCCeEEEEEeeccC-CCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEE-cCCCC
Q 011979          250 DVFLKPNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPD  327 (473)
Q Consensus       250 ~~~~~~~~~~~i~~~G~~~~-~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv-G~g~~  327 (473)
                        .++++++.++++.+|... .++++.+++|+..+.++                           .|++.+++. |.++ 
T Consensus       225 --~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~---------------------------~~~~~~v~~~g~~~-  274 (396)
T 3dzc_A          225 --MLDASKKLILVTGHRRESFGGGFERICQALITTAEQ---------------------------HPECQILYPVHLNP-  274 (396)
T ss_dssp             --TCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCBCH-
T ss_pred             --ccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHh---------------------------CCCceEEEEeCCCh-
Confidence              012345545666655433 46789999999998773                           688999886 5543 


Q ss_pred             hHHHHHHHHH-cCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe-ccCcccccee
Q 011979          328 KESYEEKIRR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVK  404 (473)
Q Consensus       328 ~~~l~~~~~~-~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~-~~~~~~e~i~  404 (473)
                        .+++.+++ ++. ++|.+.++ ++..++..+|+.||++|.   +| |   + ...|||++|+|||++ +.++..|.+.
T Consensus       275 --~~~~~l~~~~~~~~~v~~~~~-lg~~~~~~l~~~ad~vv~---~S-G---g-~~~EA~a~G~PvV~~~~~~~~~e~v~  343 (396)
T 3dzc_A          275 --NVREPVNKLLKGVSNIVLIEP-QQYLPFVYLMDRAHIILT---DS-G---G-IQEEAPSLGKPVLVMRETTERPEAVA  343 (396)
T ss_dssp             --HHHHHHHHHTTTCTTEEEECC-CCHHHHHHHHHHCSEEEE---SC-S---G-GGTTGGGGTCCEEECCSSCSCHHHHH
T ss_pred             --HHHHHHHHHHcCCCCEEEeCC-CCHHHHHHHHHhcCEEEE---CC-c---c-HHHHHHHcCCCEEEccCCCcchHHHH
Confidence              23444444 243 68999988 888899999999999988   45 2   2 348999999999999 6777788887


Q ss_pred             cCCceEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHH
Q 011979          405 VDKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL  463 (473)
Q Consensus       405 ~~~~G~~~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  463 (473)
                      .+ .+++++ |.+++++++..++++    ++.+++|++++..    +......+++++.+
T Consensus       344 ~G-~~~lv~~d~~~l~~ai~~ll~d----~~~~~~m~~~~~~----~~~~~aa~ri~~~l  394 (396)
T 3dzc_A          344 AG-TVKLVGTNQQQICDALSLLLTD----PQAYQAMSQAHNP----YGDGKACQRIADIL  394 (396)
T ss_dssp             HT-SEEECTTCHHHHHHHHHHHHHC----HHHHHHHHTSCCT----TCCSCHHHHHHHHH
T ss_pred             cC-ceEEcCCCHHHHHHHHHHHHcC----HHHHHHHhhccCC----CcCChHHHHHHHHH
Confidence            66 567776 799999999999995    8889999887654    44445556655543

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}

Probab=99.77  E-value=1.1e-17  Score=173.25  Aligned_cols=268  Identities=15%  Similarity=0.122  Sum_probs=175.5

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchH-HHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      .+||+|++++.....  ..+.++++..++|+++...+..      .+...+++ ..   ...+.+.+.+|.+++.|+..+
T Consensus       113 ~kPD~Vi~~gd~~~~--l~~~laA~~~~IPv~h~~aglr------s~~~~~~~p~~---~~r~~~~~~a~~~~~~se~~~  181 (403)
T 3ot5_A          113 ENPDIVLVHGDTTTS--FAAGLATFYQQKMLGHVEAGLR------TWNKYSPFPEE---MNRQLTGVMADIHFSPTKQAK  181 (403)
T ss_dssp             HCCSEEEEETTCHHH--HHHHHHHHHTTCEEEEESCCCC------CSCTTSSTTHH---HHHHHHHHHCSEEEESSHHHH
T ss_pred             cCCCEEEEECCchhH--HHHHHHHHHhCCCEEEEECCcc------ccccccCCcHH---HHHHHHHHhcCEEECCCHHHH
Confidence            789999999854322  2345677788999764333220      01111111 11   122344567999999999999


Q ss_pred             HHHHHHhCCc---eEEeeCCCCCCccc-CChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccC
Q 011979          179 HELAQNWGIK---ATVLYDQPPEFFHP-TSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK  254 (473)
Q Consensus       179 ~~l~~~~g~~---~~vi~n~~~~~f~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (473)
                      +.+.+ .|.+   +.++.|...+.+.. .....+.+.+.                                      .+ 
T Consensus       182 ~~l~~-~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~--------------------------------------~l-  221 (403)
T 3ot5_A          182 ENLLA-EGKDPATIFVTGNTAIDALKTTVQKDYHHPILE--------------------------------------NL-  221 (403)
T ss_dssp             HHHHH-TTCCGGGEEECCCHHHHHHHHHSCTTCCCHHHH--------------------------------------SC-
T ss_pred             HHHHH-cCCCcccEEEeCCchHHHHHhhhhhhcchHHHH--------------------------------------hc-
Confidence            99987 4775   45554421111100 00000001111                                      12 


Q ss_pred             CCCCeEEEEEeeccC-CCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEE-cCCCChHHHH
Q 011979          255 PNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKESYE  332 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~-~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv-G~g~~~~~l~  332 (473)
                      ++++.+++++||... .++++.+++|+..+.++                           .|++.+++. |.++   .++
T Consensus       222 ~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~---------------------------~~~~~~v~~~~~~~---~~~  271 (403)
T 3ot5_A          222 GDNRLILMTAHRRENLGEPMQGMFEAVREIVES---------------------------REDTELVYPMHLNP---AVR  271 (403)
T ss_dssp             TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCSCH---HHH
T ss_pred             cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHh---------------------------CCCceEEEecCCCH---HHH
Confidence            335556677777543 46789999999998773                           688999987 4333   234


Q ss_pred             HHHHH-cCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe-ccCccccceecCCce
Q 011979          333 EKIRR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKVDKNG  409 (473)
Q Consensus       333 ~~~~~-~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~-~~~~~~e~i~~~~~G  409 (473)
                      +.+++ ++. ++|.++++ ++..++..+|+.||++|.   +|     |....||+++|+|+|++ +.++..|.+..+ +|
T Consensus       272 ~~l~~~~~~~~~v~l~~~-l~~~~~~~l~~~ad~vv~---~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~  341 (403)
T 3ot5_A          272 EKAMAILGGHERIHLIEP-LDAIDFHNFLRKSYLVFT---DS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TL  341 (403)
T ss_dssp             HHHHHHHTTCTTEEEECC-CCHHHHHHHHHHEEEEEE---CC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SE
T ss_pred             HHHHHHhCCCCCEEEeCC-CCHHHHHHHHHhcCEEEE---CC-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-cE
Confidence            44444 344 69999998 888899999999999887   44     33448999999999999 677777887554 88


Q ss_pred             EEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Q 011979          410 LLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITE  466 (473)
Q Consensus       410 ~~~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  466 (473)
                      ++++ |.+++++++.+++++    ++.+++|++++..    |.....++++++.+.+.
T Consensus       342 ~lv~~d~~~l~~ai~~ll~~----~~~~~~m~~~~~~----~g~~~aa~rI~~~l~~~  391 (403)
T 3ot5_A          342 KLIGTNKENLIKEALDLLDN----KESHDKMAQAANP----YGDGFAANRILAAIKSH  391 (403)
T ss_dssp             EECCSCHHHHHHHHHHHHHC----HHHHHHHHHSCCT----TCCSCHHHHHHHHHHHH
T ss_pred             EEcCCCHHHHHHHHHHHHcC----HHHHHHHHhhcCc----ccCCcHHHHHHHHHHHH
Confidence            8886 899999999999985    8888889876554    44455666666655443

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}

Probab=99.76  E-value=1.3e-16  Score=164.87  Aligned_cols=149  Identities=17%  Similarity=0.176  Sum_probs=106.7

Q ss_pred             CCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEE-EEEcCCCChHHHHHH
Q 011979          256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEEK  334 (473)
Q Consensus       256 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ivG~g~~~~~l~~~  334 (473)
                      +++.++++.|+.. .++.+.+.+++..+.+                            .+++++ +++|+|++.+.++  
T Consensus       231 ~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~----------------------------~~~~~~~~~~G~~~~~~~l~--  279 (430)
T 2iyf_A          231 AEKVVLVSLGSAF-TKQPAFYRECVRAFGN----------------------------LPGWHLVLQIGRKVTPAELG--  279 (430)
T ss_dssp             CSEEEEEECTTTC-C-CHHHHHHHHHHHTT----------------------------CTTEEEEEECC---CGGGGC--
T ss_pred             CCCeEEEEcCCCC-CCcHHHHHHHHHHHhc----------------------------CCCeEEEEEeCCCCChHHhc--
Confidence            4556888999998 5555555555544422                            246777 5789887655442  


Q ss_pred             HHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc----cccceecCCce
Q 011979          335 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNG  409 (473)
Q Consensus       335 ~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~----~~e~i~~~~~G  409 (473)
                          .+ ++|.+.|. ++..   .+|..||++|.   .+ +   +++++|||++|+|+|+++..+    ..+.+.+.+.|
T Consensus       280 ----~~~~~v~~~~~-~~~~---~~l~~ad~~v~---~~-G---~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g  344 (430)
T 2iyf_A          280 ----ELPDNVEVHDW-VPQL---AILRQADLFVT---HA-G---AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVA  344 (430)
T ss_dssp             ----SCCTTEEEESS-CCHH---HHHTTCSEEEE---CC-C---HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSE
T ss_pred             ----cCCCCeEEEec-CCHH---HHhhccCEEEE---CC-C---ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCE
Confidence                23 68999987 6654   78999999887   32 2   369999999999999997644    45667777889


Q ss_pred             EEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHH
Q 011979          410 LLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWAT  454 (473)
Q Consensus       410 ~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~  454 (473)
                      +.++    |.++++++|.+++++    ++.++++++.+++......|+.
T Consensus       345 ~~~~~~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~~~~~~~~  389 (430)
T 2iyf_A          345 RKLATEEATADLLRETALALVDD----PEVARRLRRIQAEMAQEGGTRR  389 (430)
T ss_dssp             EECCCC-CCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHCHHHH
T ss_pred             EEcCCCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHhcCcHHH
Confidence            9986    689999999999985    8888889998888765444443

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*

Probab=99.72  E-value=1.1e-16  Score=163.97  Aligned_cols=150  Identities=13%  Similarity=0.091  Sum_probs=101.4

Q ss_pred             CCCCeEEEEEeeccCCC----------CHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcC
Q 011979          255 PNRPALVVSSTSWTPDE----------DFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK  324 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~~K----------~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~  324 (473)
                      ++++.++++.|+....+          .+..+++++..+                                +++++++|+
T Consensus       225 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~~  272 (398)
T 4fzr_A          225 RKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL--------------------------------GFEVVVAVS  272 (398)
T ss_dssp             CSSCEEECC----------------CCSHHHHHHHGGGG--------------------------------TCEEEECCC
T ss_pred             CCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC--------------------------------CCEEEEEeC
Confidence            35666888999997555          345555554432                                478888887


Q ss_pred             CCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec----cCccc
Q 011979          325 GPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIE  400 (473)
Q Consensus       325 g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~----~~~~~  400 (473)
                      ++..+.++    .+ .++|.+.|+ +   ++..++..||++|.   .+ +   +.++.|||++|+|+|+..    ..+..
T Consensus       273 ~~~~~~l~----~~-~~~v~~~~~-~---~~~~ll~~ad~~v~---~g-G---~~t~~Ea~~~G~P~v~~p~~~~q~~~a  336 (398)
T 4fzr_A          273 DKLAQTLQ----PL-PEGVLAAGQ-F---PLSAIMPACDVVVH---HG-G---HGTTLTCLSEGVPQVSVPVIAEVWDSA  336 (398)
T ss_dssp             C------------C-CTTEEEESC-C---CHHHHGGGCSEEEE---CC-C---HHHHHHHHHTTCCEEECCCSGGGHHHH
T ss_pred             Ccchhhhc----cC-CCcEEEeCc-C---CHHHHHhhCCEEEe---cC-C---HHHHHHHHHhCCCEEecCCchhHHHHH
Confidence            76543333    22 279999987 5   47889999999997   22 2   568999999999999954    44677


Q ss_pred             cceecCCceEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHH
Q 011979          401 ELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW  456 (473)
Q Consensus       401 e~i~~~~~G~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~  456 (473)
                      +.+.+.+.|++++    |.++++++|.+++++    ++.++++++.++++.....|+...
T Consensus       337 ~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~----~~~~~~~~~~~~~~~~~~~~~~~~  392 (398)
T 4fzr_A          337 RLLHAAGAGVEVPWEQAGVESVLAACARIRDD----SSYVGNARRLAAEMATLPTPADIV  392 (398)
T ss_dssp             HHHHHTTSEEECC-------CHHHHHHHHHHC----THHHHHHHHHHHHHTTSCCHHHHH
T ss_pred             HHHHHcCCEEecCcccCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHcCCCHHHHH
Confidence            8888889999986    688999999999995    888999999999887667665443

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}

Probab=99.70  E-value=2.8e-15  Score=152.71  Aligned_cols=350  Identities=13%  Similarity=0.055  Sum_probs=191.2

Q ss_pred             CCCeEEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCC-----CCCcchhHH
Q 011979            3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIP-----RGLPKVLKP   77 (473)
Q Consensus         3 ~~~~~~i~~~~~~g~s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~-----~~~~~~~~~   77 (473)
                      .|++++++..+..|+..++...+..|.++ ||+|++++...   ..+.....|+.++.++......     .........
T Consensus         3 ~M~~il~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~~~---~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (402)
T 3ia7_A            3 RQRHILFANVQGHGHVYPSLGLVSELARR-GHRITYVTTPL---FADEVKAAGAEVVLYKSEFDTFHVPEVVKQEDAETQ   78 (402)
T ss_dssp             CCCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECHH---HHHHHHHTTCEEEECCCGGGTSSSSSSSCCTTHHHH
T ss_pred             CCCEEEEEeCCCCcccccHHHHHHHHHhC-CCEEEEEcCHH---HHHHHHHcCCEEEecccccccccccccccccchHHH
Confidence            35567767777677777888888899887 99999999532   1223345688888877311000     000111111


Q ss_pred             HHH-HHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhh-------cCCC
Q 011979           78 VLL-LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLS-------LGRR  149 (473)
Q Consensus        78 ~~~-~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~-------~~~~  149 (473)
                      +.. +.+.......-+...+ +..+||+|+++++..   . .+.+++...++|+++..|+++.......       ....
T Consensus        79 ~~~~~~~~~~~~~~~l~~~l-~~~~pD~Vi~d~~~~---~-~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~  153 (402)
T 3ia7_A           79 LHLVYVRENVAILRAAEEAL-GDNPPDLVVYDVFPF---I-AGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNGQR  153 (402)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-TTCCCSEEEEESTTH---H-HHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHH-hccCCCEEEECchHH---H-HHHHHHHhhCCCEEEEecccccCcccccccccccccccc
Confidence            111 2222222222222333 337899999985222   1 2456667788999998877642110000       0000


Q ss_pred             ch--HHHHHHHHHHHHhhc-------------CCEEEEcCHHHHHHHHHHhCCceEEeeCCCCCCcccCChhHHHHHHHh
Q 011979          150 SH--FVSIYRWIEKYYGKM-------------ANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCR  214 (473)
Q Consensus       150 ~~--~~~~~~~~e~~~~~~-------------ad~vi~vS~~~~~~l~~~~g~~~~vi~n~~~~~f~~~~~~~~~~l~~~  214 (473)
                      .+  ...+..++.+...+.             .|..++.+....+.....++.+  +.+.|+.-  ....  .       
T Consensus       154 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~vGp~~--~~~~--~-------  220 (402)
T 3ia7_A          154 HPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETFDER--FAFVGPTL--TGRD--G-------  220 (402)
T ss_dssp             CGGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGGCCTT--EEECCCCC--CC------------
T ss_pred             ChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccccCCCC--eEEeCCCC--CCcc--c-------
Confidence            01  111222222222111             1333333332222221112222  11222110  0000  0       


Q ss_pred             hhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccC
Q 011979          215 LNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED  294 (473)
Q Consensus       215 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~  294 (473)
                                               ..       .-....++++.++++.|+....+ .+.+.+.+..+.+         
T Consensus       221 -------------------------~~-------~~~~~~~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~~---------  258 (402)
T 3ia7_A          221 -------------------------QP-------GWQPPRPDAPVLLVSLGNQFNEH-PEFFRACAQAFAD---------  258 (402)
T ss_dssp             --------------------------C-------CCCCSSTTCCEEEEECCSCSSCC-HHHHHHHHHHHTT---------
T ss_pred             -------------------------CC-------CCcccCCCCCEEEEECCCCCcch-HHHHHHHHHHHhc---------
Confidence                                     00       00011345677888999987664 2333333333322         


Q ss_pred             CCchhhHHHhhhccCccccCCCEEEE-EEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCC
Q 011979          295 DSTNEEVFLKEISDGKQYLYPRLLFI-ITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS  373 (473)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~l~-ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~  373 (473)
                                         .+ ++++ ++|++++.+.+++    + .++|.+.|+ ++..   .++..||++|.   .+ 
T Consensus       259 -------------------~~-~~~~~~~g~~~~~~~~~~----~-~~~v~~~~~-~~~~---~ll~~ad~~v~---~~-  305 (402)
T 3ia7_A          259 -------------------TP-WHVVMAIGGFLDPAVLGP----L-PPNVEAHQW-IPFH---SVLAHARACLT---HG-  305 (402)
T ss_dssp             -------------------SS-CEEEEECCTTSCGGGGCS----C-CTTEEEESC-CCHH---HHHTTEEEEEE---CC-
T ss_pred             -------------------CC-cEEEEEeCCcCChhhhCC----C-CCcEEEecC-CCHH---HHHhhCCEEEE---CC-
Confidence                               23 4444 4676655443332    1 169999987 6554   89999999987   33 


Q ss_pred             CCCCcHHHHHHHhcCCcEEEecc-----CccccceecCCceEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011979          374 GLDLPMKVVDMFGCGLPVCAVSY-----SCIEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTL  444 (473)
Q Consensus       374 ~e~~p~kv~Eama~G~PvI~~~~-----~~~~e~i~~~~~G~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~  444 (473)
                      |   ..+++|||++|+|+|+...     .+..+.+.+.+.|..++    +.+++++++.+++++    ++.++++++.+.
T Consensus       306 G---~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~----~~~~~~~~~~~~  378 (402)
T 3ia7_A          306 T---TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAAD----SAVRERVRRMQR  378 (402)
T ss_dssp             C---HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHC----HHHHHHHHHHHH
T ss_pred             C---HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHH
Confidence            2   2588999999999996644     46677778888999885    689999999999995    888888988888


Q ss_pred             HhccccchHHHH
Q 011979          445 EMGLSARWATEW  456 (473)
Q Consensus       445 ~~~~~~~w~~~~  456 (473)
                      ++.....++...
T Consensus       379 ~~~~~~~~~~~~  390 (402)
T 3ia7_A          379 DILSSGGPARAA  390 (402)
T ss_dssp             HHHTSCHHHHHH
T ss_pred             HHhhCChHHHHH
Confidence            876555544433

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*

Probab=99.68  E-value=5.8e-16  Score=157.84  Aligned_cols=154  Identities=10%  Similarity=0.090  Sum_probs=114.7

Q ss_pred             CCCCeEEEEEeeccCCCCH-HHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHH
Q 011979          255 PNRPALVVSSTSWTPDEDF-GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE  333 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~~K~~-~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~  333 (473)
                      ++++.++++.|+....++. ..+++++... .                           ..|+++++++|+++..+.++ 
T Consensus       216 ~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~---------------------------~~p~~~~v~~~~~~~~~~l~-  266 (391)
T 3tsa_A          216 TSARRVCICMGRMVLNATGPAPLLRAVAAA-T---------------------------ELPGVEAVIAVPPEHRALLT-  266 (391)
T ss_dssp             CSSEEEEEECCHHHHHHHCSHHHHHHHHHH-H---------------------------TSTTEEEEEECCGGGGGGCT-
T ss_pred             CCCCEEEEEcCCCCCcccchHHHHHHHHHh-c---------------------------cCCCeEEEEEECCcchhhcc-
Confidence            4566688888998765444 6666666655 4                           35789999999876544332 


Q ss_pred             HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec----cCccccceecCCc
Q 011979          334 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIEELVKVDKN  408 (473)
Q Consensus       334 ~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~----~~~~~e~i~~~~~  408 (473)
                           ++ ++|.+.|+ ++..   .++..||++|.   .+    -+.+++|||++|+|+|+..    ..+..+.+.+.+.
T Consensus       267 -----~~~~~v~~~~~-~~~~---~ll~~ad~~v~---~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~  330 (391)
T 3tsa_A          267 -----DLPDNARIAES-VPLN---LFLRTCELVIC---AG----GSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGA  330 (391)
T ss_dssp             -----TCCTTEEECCS-CCGG---GTGGGCSEEEE---CC----CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTS
T ss_pred             -----cCCCCEEEecc-CCHH---HHHhhCCEEEe---CC----CHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCC
Confidence                 23 69999987 6654   45699999997   22    2358999999999999964    3456677888889


Q ss_pred             eEEeCC------HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHH
Q 011979          409 GLLFSS------SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWE  457 (473)
Q Consensus       409 G~~~~~------~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~  457 (473)
                      |++++.      .+++++++.+++++    ++.++++++.+.++.....|+...+
T Consensus       331 g~~~~~~~~~~~~~~l~~ai~~ll~~----~~~~~~~~~~~~~~~~~~~~~~~~~  381 (391)
T 3tsa_A          331 GICLPDEQAQSDHEQFTDSIATVLGD----TGFAAAAIKLSDEITAMPHPAALVR  381 (391)
T ss_dssp             EEECCSHHHHTCHHHHHHHHHHHHTC----THHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred             EEecCcccccCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHcCCCHHHHHH
Confidence            999854      89999999999985    8889999999988776666654433

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*

Probab=99.67  E-value=1.5e-15  Score=155.52  Aligned_cols=154  Identities=18%  Similarity=0.079  Sum_probs=109.9

Q ss_pred             CCCCCeEEEEEeeccCC-CCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHH
Q 011979          254 KPNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE  332 (473)
Q Consensus       254 ~~~~~~~i~~~G~~~~~-K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~  332 (473)
                      .++++.++++.|++... ++.+.+.++++.+.+                             .+++++++|+++..+.++
T Consensus       229 ~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~-----------------------------~~~~~v~~~g~~~~~~l~  279 (398)
T 3oti_A          229 VPARPEVAITMGTIELQAFGIGAVEPIIAAAGE-----------------------------VDADFVLALGDLDISPLG  279 (398)
T ss_dssp             CCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT-----------------------------SSSEEEEECTTSCCGGGC
T ss_pred             CCCCCEEEEEcCCCccccCcHHHHHHHHHHHHc-----------------------------CCCEEEEEECCcChhhhc
Confidence            34567788889999655 355555555555543                             257889998876544333


Q ss_pred             HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe----ccCccc--cceec
Q 011979          333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV----SYSCIE--ELVKV  405 (473)
Q Consensus       333 ~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~----~~~~~~--e~i~~  405 (473)
                            ++ +||.+.|+ +   ++..++..||++|.   .+    -+.++.|||++|+|+|+.    +..+..  +.+.+
T Consensus       280 ------~~~~~v~~~~~-~---~~~~ll~~ad~~v~---~~----G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~  342 (398)
T 3oti_A          280 ------TLPRNVRAVGW-T---PLHTLLRTCTAVVH---HG----GGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSR  342 (398)
T ss_dssp             ------SCCTTEEEESS-C---CHHHHHTTCSEEEE---CC----CHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHH
T ss_pred             ------cCCCcEEEEcc-C---CHHHHHhhCCEEEE---CC----CHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHH
Confidence                  23 69999987 4   57788999999997   22    235899999999999994    456777  88888


Q ss_pred             CCceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHH
Q 011979          406 DKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWE  457 (473)
Q Consensus       406 ~~~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~  457 (473)
                      .+.|+.++..+.-.+.+.+++++    ++.++++++.+.++.....|+...+
T Consensus       343 ~g~g~~~~~~~~~~~~l~~ll~~----~~~~~~~~~~~~~~~~~~~~~~~~~  390 (398)
T 3oti_A          343 RGIGLVSTSDKVDADLLRRLIGD----ESLRTAAREVREEMVALPTPAETVR  390 (398)
T ss_dssp             HTSEEECCGGGCCHHHHHHHHHC----HHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred             CCCEEeeCCCCCCHHHHHHHHcC----HHHHHHHHHHHHHHHhCCCHHHHHH
Confidence            89999986322223333377774    8999999999998776666654443

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*

Probab=99.65  E-value=3e-14  Score=146.32  Aligned_cols=346  Identities=13%  Similarity=0.083  Sum_probs=188.2

Q ss_pred             CCCeEEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCC-----CcchhHH
Q 011979            3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRG-----LPKVLKP   77 (473)
Q Consensus         3 ~~~~~~i~~~~~~g~s~r~~~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~-----~~~~~~~   77 (473)
                      +|++++++..+..|+..++...+..|.++ ||+|++++...   ..+.....|+.++.++........     .......
T Consensus        19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~-Gh~V~v~~~~~---~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (415)
T 3rsc_A           19 HMAHLLIVNVASHGLILPTLTVVTELVRR-GHRVSYVTAGG---FAEPVRAAGATVVPYQSEIIDADAAEVFGSDDLGVR   94 (415)
T ss_dssp             CCCEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGG---GHHHHHHTTCEEEECCCSTTTCCHHHHHHSSSSCHH
T ss_pred             cCCEEEEEeCCCccccccHHHHHHHHHHC-CCEEEEEeCHH---HHHHHHhcCCEEEeccccccccccchhhccccHHHH
Confidence            46778877777778888888899999997 99999999432   223344568888888732110000     0000111


Q ss_pred             HHH-HHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhh-------hhhcCCC
Q 011979           78 VLL-LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLL-------SLSLGRR  149 (473)
Q Consensus        78 ~~~-~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-------~~~~~~~  149 (473)
                      +.. +.+.......-+...+ +..+||+|+++++...    .+.+++...++|+++..+++.....       .......
T Consensus        95 ~~~~~~~~~~~~~~~l~~~l-~~~~PDlVi~d~~~~~----~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~  169 (415)
T 3rsc_A           95 PHLMYLRENVSVLRATAEAL-DGDVPDLVLYDDFPFI----AGQLLAARWRRPAVRLSAAFASNEHYSFSQDMVTLAGTI  169 (415)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-SSSCCSEEEEESTTHH----HHHHHHHHTTCCEEEEESSCCCCSSCCHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHH-hccCCCEEEECchhhh----HHHHHHHHhCCCEEEEEecccccCccccccccccccccC
Confidence            111 1111112122222333 3378999998743222    2456677789999998877631100       0000000


Q ss_pred             ch--HHHHHHHHHHHHhhc-------------CCEEEEcCHHHHHHHHHHhCCceEEeeCCCCCCcccCChhHHHHHHHh
Q 011979          150 SH--FVSIYRWIEKYYGKM-------------ANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCR  214 (473)
Q Consensus       150 ~~--~~~~~~~~e~~~~~~-------------ad~vi~vS~~~~~~l~~~~g~~~~vi~n~~~~~f~~~~~~~~~~l~~~  214 (473)
                      .+  .......+.+...+.             ++..++.+....+.....++.+  +.+.|+.  +... .         
T Consensus       170 ~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~vGp~--~~~~-~---------  235 (415)
T 3rsc_A          170 DPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTFDDR--FVFVGPC--FDDR-R---------  235 (415)
T ss_dssp             CGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGCCTT--EEECCCC--CCCC-G---------
T ss_pred             ChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccCCCc--eEEeCCC--CCCc-c---------
Confidence            01  111111222211111             1333333222211111111111  1111111  0000 0         


Q ss_pred             hhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccC
Q 011979          215 LNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED  294 (473)
Q Consensus       215 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~  294 (473)
                                              +...+       ....++++.++++.|+...... +.+...+..+.+         
T Consensus       236 ------------------------~~~~~-------~~~~~~~~~v~v~~Gs~~~~~~-~~~~~~~~al~~---------  274 (415)
T 3rsc_A          236 ------------------------FLGEW-------TRPADDLPVVLVSLGTTFNDRP-GFFRDCARAFDG---------  274 (415)
T ss_dssp             ------------------------GGCCC-------CCCSSCCCEEEEECTTTSCCCH-HHHHHHHHHHTT---------
T ss_pred             ------------------------cCcCc-------cccCCCCCEEEEECCCCCCChH-HHHHHHHHHHhc---------
Confidence                                    00000       0113456778888899865432 223223332222         


Q ss_pred             CCchhhHHHhhhccCccccCCCEEEEE-EcCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCC
Q 011979          295 DSTNEEVFLKEISDGKQYLYPRLLFII-TGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS  372 (473)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~l~i-vG~g~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s  372 (473)
                                         .+ +++++ +|.+++.+.++      .+ ++|.+.++ ++..   .++..||++|.   .+
T Consensus       275 -------------------~~-~~~v~~~g~~~~~~~l~------~~~~~v~~~~~-~~~~---~ll~~ad~~v~---~~  321 (415)
T 3rsc_A          275 -------------------QP-WHVVMTLGGQVDPAALG------DLPPNVEAHRW-VPHV---KVLEQATVCVT---HG  321 (415)
T ss_dssp             -------------------SS-CEEEEECTTTSCGGGGC------CCCTTEEEESC-CCHH---HHHHHEEEEEE---SC
T ss_pred             -------------------CC-cEEEEEeCCCCChHHhc------CCCCcEEEEec-CCHH---HHHhhCCEEEE---CC
Confidence                               23 66666 77665554433      23 69999987 6544   88999999997   22


Q ss_pred             CCCCCcHHHHHHHhcCCcEEEec----cCccccceecCCceEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011979          373 SGLDLPMKVVDMFGCGLPVCAVS----YSCIEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTL  444 (473)
Q Consensus       373 ~~e~~p~kv~Eama~G~PvI~~~----~~~~~e~i~~~~~G~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~  444 (473)
                       |   ..+++|||++|+|+|+..    .....+.+.+.+.|..+.    +.++++++|.+++++    ++.++++++.+.
T Consensus       322 -G---~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~  393 (415)
T 3rsc_A          322 -G---MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAAD----PALLARVEAMRG  393 (415)
T ss_dssp             -C---HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHTC----HHHHHHHHHHHH
T ss_pred             -c---HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHH
Confidence             2   258899999999999954    444667777778888875    689999999999995    888888888888


Q ss_pred             HhccccchH
Q 011979          445 EMGLSARWA  453 (473)
Q Consensus       445 ~~~~~~~w~  453 (473)
                      ++.....++
T Consensus       394 ~~~~~~~~~  402 (415)
T 3rsc_A          394 HVRRAGGAA  402 (415)
T ss_dssp             HHHHSCHHH
T ss_pred             HHHhcCHHH
Confidence            766444443

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}

Probab=99.57  E-value=2.6e-13  Score=137.98  Aligned_cols=157  Identities=13%  Similarity=0.109  Sum_probs=109.4

Q ss_pred             CCCCeEEEEEeeccCC-------CCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCC
Q 011979          255 PNRPALVVSSTSWTPD-------EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD  327 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~~-------K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~  327 (473)
                      ++++.++++.|+....       +.+..+++++...                                +++++++++++.
T Consensus       208 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~~~~~g~~~  255 (384)
T 2p6p_A          208 DTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW--------------------------------DVELIVAAPDTV  255 (384)
T ss_dssp             CSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT--------------------------------TCEEEEECCHHH
T ss_pred             CCCCEEEEECCCCCccccccccHHHHHHHHHHHhcC--------------------------------CcEEEEEeCCCC
Confidence            3456688999999875       5566777776542                                477887765432


Q ss_pred             hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC----ccccce
Q 011979          328 KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELV  403 (473)
Q Consensus       328 ~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~----~~~e~i  403 (473)
                      .+.++    .+. ++|.+ |. ++   ...+|..||++|.   .+ |   +++++|||++|+|+|+.+..    ...+.+
T Consensus       256 ~~~l~----~~~-~~v~~-~~-~~---~~~~l~~~d~~v~---~~-G---~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~  318 (384)
T 2p6p_A          256 AEALR----AEV-PQARV-GW-TP---LDVVAPTCDLLVH---HA-G---GVSTLTGLSAGVPQLLIPKGSVLEAPARRV  318 (384)
T ss_dssp             HHHHH----HHC-TTSEE-EC-CC---HHHHGGGCSEEEE---CS-C---TTHHHHHHHTTCCEEECCCSHHHHHHHHHH
T ss_pred             HHhhC----CCC-CceEE-cC-CC---HHHHHhhCCEEEe---CC-c---HHHHHHHHHhCCCEEEccCcccchHHHHHH
Confidence            22222    221 58888 76 65   4668899999998   32 1   34899999999999999754    366667


Q ss_pred             ecCCceEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Q 011979          404 KVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLIT  465 (473)
Q Consensus       404 ~~~~~G~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~  465 (473)
                      .+.+.|+.++    +.++++++|.+++++    ++.++++++.+.++..... .+..-+.+.+++.
T Consensus       319 ~~~g~g~~~~~~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~  379 (384)
T 2p6p_A          319 ADYGAAIALLPGEDSTEAIADSCQELQAK----DTYARRAQDLSREISGMPL-PATVVTALEQLAH  379 (384)
T ss_dssp             HHHTSEEECCTTCCCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHTSCC-HHHHHHHHHHHHH
T ss_pred             HHCCCeEecCcCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHhCCC-HHHHHHHHHHHhh
Confidence            7778899885    689999999999995    8888888888888763332 2333333444443

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}

Probab=99.46  E-value=2.4e-11  Score=125.28  Aligned_cols=142  Identities=15%  Similarity=0.150  Sum_probs=100.0

Q ss_pred             CCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEE-EEEcCCCChHHHHH
Q 011979          255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEE  333 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ivG~g~~~~~l~~  333 (473)
                      ++++.++++.|+.. ....+.+.+++..+.+                             .++++ +++|.+.+.+.++ 
T Consensus       253 ~~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~-----------------------------~~~~~~~~~g~~~~~~~~~-  301 (424)
T 2iya_A          253 DGRPVLLIALGSAF-TDHLDFYRTCLSAVDG-----------------------------LDWHVVLSVGRFVDPADLG-  301 (424)
T ss_dssp             SSCCEEEEECCSSS-CCCHHHHHHHHHHHTT-----------------------------CSSEEEEECCTTSCGGGGC-
T ss_pred             CCCCEEEEEcCCCC-cchHHHHHHHHHHHhc-----------------------------CCcEEEEEECCcCChHHhc-
Confidence            34667888889987 3344444333433322                             34666 5578766544332 


Q ss_pred             HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC----ccccceecCCc
Q 011979          334 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVDKN  408 (473)
Q Consensus       334 ~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~----~~~e~i~~~~~  408 (473)
                           .+ ++|.+.+. +|+.   .+|..||++|.   . .|   .++++||+++|+|+|+....    ...+.+.+.+.
T Consensus       302 -----~~~~~v~~~~~-~~~~---~~l~~~d~~v~---~-~G---~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~  365 (424)
T 2iya_A          302 -----EVPPNVEVHQW-VPQL---DILTKASAFIT---H-AG---MGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGL  365 (424)
T ss_dssp             -----SCCTTEEEESS-CCHH---HHHTTCSEEEE---C-CC---HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTS
T ss_pred             -----cCCCCeEEecC-CCHH---HHHhhCCEEEE---C-Cc---hhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCC
Confidence                 23 68999986 7654   68999999886   2 22   36999999999999999753    34556667788


Q ss_pred             eEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          409 GLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       409 G~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      |+.++    +.++++++|.+++++    ++.++++++.+.+..
T Consensus       366 g~~~~~~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~  404 (424)
T 2iya_A          366 GRHIPRDQVTAEKLREAVLAVASD----PGVAERLAAVRQEIR  404 (424)
T ss_dssp             EEECCGGGCCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHH
T ss_pred             EEEcCcCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHH
Confidence            98885    689999999999985    777778877777755

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}

Probab=99.45  E-value=1.4e-12  Score=134.12  Aligned_cols=248  Identities=15%  Similarity=0.136  Sum_probs=157.1

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH  179 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~  179 (473)
                      .+||+|++++.... ++ . .++++..++|+++...+..       .........   .....+.+.+|.+++.|+..++
T Consensus        93 ~kPD~Vlv~gd~~~-~~-a-alaA~~~~IPv~h~eaglr-------s~~~~~pee---~nR~~~~~~a~~~~~~te~~~~  159 (385)
T 4hwg_A           93 EKPDAVLFYGDTNS-CL-S-AIAAKRRKIPIFHMEAGNR-------CFDQRVPEE---INRKIIDHISDVNITLTEHARR  159 (385)
T ss_dssp             HCCSEEEEESCSGG-GG-G-HHHHHHTTCCEEEESCCCC-------CSCTTSTHH---HHHHHHHHHCSEEEESSHHHHH
T ss_pred             cCCcEEEEECCchH-HH-H-HHHHHHhCCCEEEEeCCCc-------cccccCcHH---HHHHHHHhhhceeecCCHHHHH
Confidence            78999999985432 22 2 4566778999765444331       111110011   1123344679999999999999


Q ss_pred             HHHHHhCCc---eEEeeCCCCCCcccC-ChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCC
Q 011979          180 ELAQNWGIK---ATVLYDQPPEFFHPT-SLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP  255 (473)
Q Consensus       180 ~l~~~~g~~---~~vi~n~~~~~f~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (473)
                      .+.+ .|.+   +.++.|...+.+... +...+.+++++++                                    +++
T Consensus       160 ~l~~-~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lg------------------------------------l~~  202 (385)
T 4hwg_A          160 YLIA-EGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLS------------------------------------LTP  202 (385)
T ss_dssp             HHHH-TTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTT------------------------------------CCT
T ss_pred             HHHH-cCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcC------------------------------------CCc
Confidence            9887 4775   444433211111110 0112233344443                                    222


Q ss_pred             CCCeEEEEEeecc---CCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHH
Q 011979          256 NRPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE  332 (473)
Q Consensus       256 ~~~~~i~~~G~~~---~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~  332 (473)
                       ++.+++..|+..   ..+++..+++|+..+.++                           . ++.+++... |   .++
T Consensus       203 -~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~---------------------------~-~~~vv~p~~-p---~~~  249 (385)
T 4hwg_A          203 -KQYFLISSHREENVDVKNNLKELLNSLQMLIKE---------------------------Y-NFLIIFSTH-P---RTK  249 (385)
T ss_dssp             -TSEEEEEECCC-----CHHHHHHHHHHHHHHHH---------------------------H-CCEEEEEEC-H---HHH
T ss_pred             -CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhc---------------------------C-CeEEEEECC-h---HHH
Confidence             455677777643   346788999999988763                           3 567666543 3   356


Q ss_pred             HHHHHc-C-C---CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC-ccccceecC
Q 011979          333 EKIRRL-R-L---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVD  406 (473)
Q Consensus       333 ~~~~~~-~-l---~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~-~~~e~i~~~  406 (473)
                      +.++++ + +   ++|.+.++ ++..++..+++.||+++.   +|.     ....||+++|+|||+.... +..|.+..+
T Consensus       250 ~~l~~~~~~~~~~~~v~l~~~-lg~~~~~~l~~~adlvvt---~SG-----gv~~EA~alG~Pvv~~~~~ter~e~v~~G  320 (385)
T 4hwg_A          250 KRLEDLEGFKELGDKIRFLPA-FSFTDYVKLQMNAFCILS---DSG-----TITEEASILNLPALNIREAHERPEGMDAG  320 (385)
T ss_dssp             HHHHTSGGGGGTGGGEEECCC-CCHHHHHHHHHHCSEEEE---CCT-----THHHHHHHTTCCEEECSSSCSCTHHHHHT
T ss_pred             HHHHHHHHHhcCCCCEEEEcC-CCHHHHHHHHHhCcEEEE---CCc-----cHHHHHHHcCCCEEEcCCCccchhhhhcC
Confidence            666665 4 2   58999988 888899999999999996   452     2579999999999998643 356766554


Q ss_pred             CceEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011979          407 KNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTL  444 (473)
Q Consensus       407 ~~G~~~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~  444 (473)
                       ++++++ |.+++++++..++++    +..+++|++++.
T Consensus       321 -~~~lv~~d~~~i~~ai~~ll~d----~~~~~~m~~~~~  354 (385)
T 4hwg_A          321 -TLIMSGFKAERVLQAVKTITEE----HDNNKRTQGLVP  354 (385)
T ss_dssp             -CCEECCSSHHHHHHHHHHHHTT----CBTTBCCSCCCH
T ss_pred             -ceEEcCCCHHHHHHHHHHHHhC----hHHHHHhhccCC
Confidence             778886 899999999999986    444444544333

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}

Probab=99.36  E-value=1.6e-10  Score=120.07  Aligned_cols=148  Identities=14%  Similarity=0.062  Sum_probs=106.7

Q ss_pred             CCCCeEEEEEeeccCC-----CCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChH
Q 011979          255 PNRPALVVSSTSWTPD-----EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE  329 (473)
Q Consensus       255 ~~~~~~i~~~G~~~~~-----K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~  329 (473)
                      ++++.++++.|+....     +.+..+++++..+                                +++++++++++..+
T Consensus       265 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~  312 (441)
T 2yjn_A          265 PERRRVCLTLGISSRENSIGQVSIEELLGAVGDV--------------------------------DAEIIATFDAQQLE  312 (441)
T ss_dssp             CSSCEEEEEC----------CCSTTTTHHHHHTS--------------------------------SSEEEECCCTTTTS
T ss_pred             CCCCEEEEECCCCcccccChHHHHHHHHHHHHcC--------------------------------CCEEEEEECCcchh
Confidence            4567788899998754     7788888887653                                46788877665433


Q ss_pred             HHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC----cccccee
Q 011979          330 SYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVK  404 (473)
Q Consensus       330 ~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~----~~~e~i~  404 (473)
                      .++      ++ ++|.+.++ ++.   ..+|..||++|.   . .|   +.+++|||++|+|+|+.+..    ...+.+.
T Consensus       313 ~l~------~~~~~v~~~~~-~~~---~~ll~~ad~~V~---~-~G---~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~  375 (441)
T 2yjn_A          313 GVA------NIPDNVRTVGF-VPM---HALLPTCAATVH---H-GG---PGSWHTAAIHGVPQVILPDGWDTGVRAQRTQ  375 (441)
T ss_dssp             SCS------SCCSSEEECCS-CCH---HHHGGGCSEEEE---C-CC---HHHHHHHHHTTCCEEECCCSHHHHHHHHHHH
T ss_pred             hhc------cCCCCEEEecC-CCH---HHHHhhCCEEEE---C-CC---HHHHHHHHHhCCCEEEeCCcccHHHHHHHHH
Confidence            221      23 68999986 765   467899999997   2 22   46899999999999999763    3566777


Q ss_pred             cCCceEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHH
Q 011979          405 VDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATE  455 (473)
Q Consensus       405 ~~~~G~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~  455 (473)
                      +.+.|+.++    +.++++++|.+++++    ++.++++++.+.+......++..
T Consensus       376 ~~g~g~~~~~~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~~~~~~~~~  426 (441)
T 2yjn_A          376 EFGAGIALPVPELTPDQLRESVKRVLDD----PAHRAGAARMRDDMLAEPSPAEV  426 (441)
T ss_dssp             HHTSEEECCTTTCCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHTSCCHHHH
T ss_pred             HcCCEEEcccccCCHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHcCCCHHHH
Confidence            778899885    689999999999985    88888898888887655554443

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*

Probab=99.24  E-value=1.8e-09  Score=111.01  Aligned_cols=139  Identities=13%  Similarity=0.096  Sum_probs=96.1

Q ss_pred             CCCCeEEEEEeecc-CCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHH
Q 011979          255 PNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE  333 (473)
Q Consensus       255 ~~~~~~i~~~G~~~-~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~  333 (473)
                      ++++.++++.|+.. ..+....+++++..+                                ++++++.+++...+.   
T Consensus       219 ~~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~--------------------------------~~~vv~~~g~~~~~~---  263 (404)
T 3h4t_A          219 AGSPPVYVGFGSGPAPAEAARVAIEAVRAQ--------------------------------GRRVVLSSGWAGLGR---  263 (404)
T ss_dssp             TSSCCEEECCTTSCCCTTHHHHHHHHHHHT--------------------------------TCCEEEECTTTTCCC---
T ss_pred             cCCCeEEEECCCCCCcHHHHHHHHHHHHhC--------------------------------CCEEEEEeCCccccc---
Confidence            34566888889987 555566666666653                                356666654332211   


Q ss_pred             HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc----cccceecCCc
Q 011979          334 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKN  408 (473)
Q Consensus       334 ~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~----~~e~i~~~~~  408 (473)
                          .+. +||.+.++ +|.   ..++..+|++|.   .+ |   ..++.||+++|+|+|+....+    ..+.+.+.+.
T Consensus       264 ----~~~~~~v~~~~~-~~~---~~ll~~~d~~v~---~g-G---~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~  328 (404)
T 3h4t_A          264 ----IDEGDDCLVVGE-VNH---QVLFGRVAAVVH---HG-G---AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGV  328 (404)
T ss_dssp             ----SSCCTTEEEESS-CCH---HHHGGGSSEEEE---CC-C---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTS
T ss_pred             ----ccCCCCEEEecC-CCH---HHHHhhCcEEEE---CC-c---HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCC
Confidence                223 69999976 664   567789999997   22 2   248899999999999986433    3345666677


Q ss_pred             eEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcc
Q 011979          409 GLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGL  448 (473)
Q Consensus       409 G~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~  448 (473)
                      |...+    +.+++++++.++++     ++.++++++.+.++..
T Consensus       329 g~~l~~~~~~~~~l~~ai~~ll~-----~~~~~~~~~~~~~~~~  367 (404)
T 3h4t_A          329 GVAHDGPTPTVESLSAALATALT-----PGIRARAAAVAGTIRT  367 (404)
T ss_dssp             EEECSSSSCCHHHHHHHHHHHTS-----HHHHHHHHHHHTTCCC
T ss_pred             EeccCcCCCCHHHHHHHHHHHhC-----HHHHHHHHHHHHHHhh
Confidence            88864    68999999999976     4667777777776553

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.23  E-value=1.8e-09  Score=111.13  Aligned_cols=135  Identities=11%  Similarity=0.043  Sum_probs=94.8

Q ss_pred             CCeEEEEEeecc-CCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEE-cCCCChHHHHHH
Q 011979          257 RPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKESYEEK  334 (473)
Q Consensus       257 ~~~~i~~~G~~~-~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv-G~g~~~~~l~~~  334 (473)
                      ++.++++.|+.. ..+..+.+++++..+                                +.+++++ |.+...  .   
T Consensus       238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~--~---  280 (415)
T 1iir_A          238 PPPVYLGFGSLGAPADAVRVAIDAIRAH--------------------------------GRRVILSRGWADLV--L---  280 (415)
T ss_dssp             SCCEEEECC---CCHHHHHHHHHHHHHT--------------------------------TCCEEECTTCTTCC--C---
T ss_pred             CCeEEEeCCCCCCcHHHHHHHHHHHHHC--------------------------------CCeEEEEeCCCccc--c---
Confidence            455888889984 666667777777653                                2345554 765422  0   


Q ss_pred             HHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc----cccceecCCce
Q 011979          335 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNG  409 (473)
Q Consensus       335 ~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~----~~e~i~~~~~G  409 (473)
                         ..+ ++|.+.+. +|..   .++..||++|.   .+ |   .++++||+++|+|+|+....+    ..+.+.+.+.|
T Consensus       281 ---~~~~~~v~~~~~-~~~~---~~l~~~d~~v~---~~-G---~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g  346 (415)
T 1iir_A          281 ---PDDGADCFAIGE-VNHQ---VLFGRVAAVIH---HG-G---AGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVG  346 (415)
T ss_dssp             ---SSCGGGEEECSS-CCHH---HHGGGSSEEEE---CC-C---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSE
T ss_pred             ---cCCCCCEEEeCc-CChH---HHHhhCCEEEe---CC-C---hhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCc
Confidence               234 68999976 8764   45799999997   22 2   369999999999999986543    55667777889


Q ss_pred             EEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          410 LLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       410 ~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      +..+    +.++++++|.++ ++    ++.++++++.+.+..
T Consensus       347 ~~~~~~~~~~~~l~~~i~~l-~~----~~~~~~~~~~~~~~~  383 (415)
T 1iir_A          347 VAHDGPIPTFDSLSAALATA-LT----PETHARATAVAGTIR  383 (415)
T ss_dssp             EECSSSSCCHHHHHHHHHHH-TS----HHHHHHHHHHHHHSC
T ss_pred             ccCCcCCCCHHHHHHHHHHH-cC----HHHHHHHHHHHHHHh
Confidence            8875    689999999999 74    777777777777644

>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A

Probab=99.19  E-value=8.3e-09  Score=110.94  Aligned_cols=172  Identities=13%  Similarity=0.060  Sum_probs=127.8

Q ss_pred             EEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEE--EEcCCC-ChHHHHHHHH
Q 011979          260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI--ITGKGP-DKESYEEKIR  336 (473)
Q Consensus       260 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--ivG~g~-~~~~l~~~~~  336 (473)
                      +++..++  ..|..+.+++++..+.++                           .|+..++  ++|+++ ....+.+.+.
T Consensus       443 ~Fg~fn~--~~Ki~p~~l~~WarIL~~---------------------------vP~s~L~l~~~g~~~g~~~~~~~~~~  493 (631)
T 3q3e_A          443 NIGIAST--TMKLNPYFLEALKAIRDR---------------------------AKVKVHFHFALGQSNGITHPYVERFI  493 (631)
T ss_dssp             EEEEEEC--STTCCHHHHHHHHHHHHH---------------------------CSSEEEEEEEESSCCGGGHHHHHHHH
T ss_pred             EEEECCc--cccCCHHHHHHHHHHHHh---------------------------CCCcEEEEEecCCCchhhHHHHHHHH
Confidence            4555555  468889999999998875                           5776654  367432 2334445566


Q ss_pred             HcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCcccccee------cCCce
Q 011979          337 RLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVK------VDKNG  409 (473)
Q Consensus       337 ~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~------~~~~G  409 (473)
                      +.|+ ++|.|.|. ++.++....|+.+|+++-   ++.. +-|++.+|||+||+|||+........-+.      -|-.+
T Consensus       494 ~~GI~~Rv~F~g~-~p~~e~la~y~~aDIfLD---pfpy-~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE  568 (631)
T 3q3e_A          494 KSYLGDSATAHPH-SPYHQYLRILHNCDMMVN---PFPF-GNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPE  568 (631)
T ss_dssp             HHHHGGGEEEECC-CCHHHHHHHHHTCSEEEC---CSSS-CCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCG
T ss_pred             HcCCCccEEEcCC-CCHHHHHHHHhcCcEEEe---CCcc-cCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCc
Confidence            7788 79999998 999999999999999998   3433 34899999999999999976555443332      24445


Q ss_pred             E-EeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccc-c---chHHHHHHHHHHHHHHHhh
Q 011979          410 L-LFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS-A---RWATEWEEHAKPLITEVIS  469 (473)
Q Consensus       410 ~-~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~---~w~~~~~~~~~~~~~~~~~  469 (473)
                      + +..|.+++++...++..+    ++.+.+++++.++.... .   .|...+++.+..++.+..+
T Consensus       569 ~LIA~d~eeYv~~Av~La~D----~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~~w~~  629 (631)
T 3q3e_A          569 WLIANTVDEYVERAVRLAEN----HQERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLNAFLK  629 (631)
T ss_dssp             GGEESSHHHHHHHHHHHHHC----HHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHHHHHH
T ss_pred             ceecCCHHHHHHHHHHHhCC----HHHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHh
Confidence            3 778999999999999995    99999999999886522 1   4567778877777776543

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*

Probab=99.14  E-value=4.2e-10  Score=114.38  Aligned_cols=144  Identities=17%  Similarity=0.130  Sum_probs=94.1

Q ss_pred             CCCCCeEEEEEeeccCCCC-HHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHH
Q 011979          254 KPNRPALVVSSTSWTPDED-FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE  332 (473)
Q Consensus       254 ~~~~~~~i~~~G~~~~~K~-~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~  332 (473)
                      .++++.++++.|+....++ ...+.+++..+.+                             .+..+++.+.+...+.. 
T Consensus       234 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~-----------------------------~~~~~v~~~~~~~~~~~-  283 (400)
T 4amg_A          234 AAGRRRIAVTLGSIDALSGGIAKLAPLFSEVAD-----------------------------VDAEFVLTLGGGDLALL-  283 (400)
T ss_dssp             CTTCCEEEECCCSCC--CCSSSTTHHHHHHGGG-----------------------------SSSEEEEECCTTCCCCC-
T ss_pred             cCCCcEEEEeCCcccccCccHHHHHHHHHHhhc-----------------------------cCceEEEEecCcccccc-
Confidence            4456668888888765543 3444444444433                             34566666654432211 


Q ss_pred             HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC----ccccceecCC
Q 011979          333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVDK  407 (473)
Q Consensus       333 ~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~----~~~e~i~~~~  407 (473)
                           ..+ +|+.+.+. +|+   ..+|..+|++|.   . .|   .++++||+++|+|+|+....    ...+.+.+.+
T Consensus       284 -----~~~~~~v~~~~~-~p~---~~lL~~~~~~v~---h-~G---~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G  347 (400)
T 4amg_A          284 -----GELPANVRVVEW-IPL---GALLETCDAIIH---H-GG---SGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLG  347 (400)
T ss_dssp             -----CCCCTTEEEECC-CCH---HHHHTTCSEEEE---C-CC---HHHHHHHHHHTCCEEECCC---CHHHHHHHHHHT
T ss_pred             -----ccCCCCEEEEee-cCH---HHHhhhhhheec---c-CC---ccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCC
Confidence                 123 68998865 764   567889999886   2 22   35899999999999997543    3556666777


Q ss_pred             ceEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          408 NGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       408 ~G~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      .|+..++.+..+++|.+++++    ++.+++.++-+.++.
T Consensus       348 ~g~~l~~~~~~~~al~~lL~d----~~~r~~a~~l~~~~~  383 (400)
T 4amg_A          348 IGFDAEAGSLGAEQCRRLLDD----AGLREAALRVRQEMS  383 (400)
T ss_dssp             SEEECCTTTCSHHHHHHHHHC----HHHHHHHHHHHHHHH
T ss_pred             CEEEcCCCCchHHHHHHHHcC----HHHHHHHHHHHHHHH
Confidence            888888766778899999985    776666666555554

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.06  E-value=1.2e-08  Score=104.97  Aligned_cols=135  Identities=10%  Similarity=-0.015  Sum_probs=93.4

Q ss_pred             CCeEEEEEeeccC---CCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEE-cCCCChHHHH
Q 011979          257 RPALVVSSTSWTP---DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKESYE  332 (473)
Q Consensus       257 ~~~~i~~~G~~~~---~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv-G~g~~~~~l~  332 (473)
                      ++.++++.|+...   .+....+++++..+                                +.+++++ |.+...  . 
T Consensus       237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~--~-  281 (416)
T 1rrv_A          237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ--------------------------------GRRVILSRGWTELV--L-  281 (416)
T ss_dssp             SCCEEECCTTCCSHHHHHHHHHHHHHHHHT--------------------------------TCCEEEECTTTTCC--C-
T ss_pred             CCeEEEecCCCCccChHHHHHHHHHHHHHC--------------------------------CCeEEEEeCCcccc--c-
Confidence            3557888899853   44455555555542                                2455554 765421  1 


Q ss_pred             HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC----ccccceecCC
Q 011979          333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVDK  407 (473)
Q Consensus       333 ~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~----~~~e~i~~~~  407 (473)
                           ..+ +++.+.+. +|.   ..++..||++|.   . .|   ..++.||+++|+|+|+....    ...+.+.+.+
T Consensus       282 -----~~~~~~v~~~~~-~~~---~~ll~~~d~~v~---~-~G---~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g  345 (416)
T 1rrv_A          282 -----PDDRDDCFAIDE-VNF---QALFRRVAAVIH---H-GS---AGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALG  345 (416)
T ss_dssp             -----SCCCTTEEEESS-CCH---HHHGGGSSEEEE---C-CC---HHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHT
T ss_pred             -----cCCCCCEEEecc-CCh---HHHhccCCEEEe---c-CC---hhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCC
Confidence                 134 68999976 774   567899999997   2 22   35999999999999998643    3455666777


Q ss_pred             ceEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          408 NGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       408 ~G~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      .|+..+    +.++++++|.++ .+    ++.++++++.+.+..
T Consensus       346 ~g~~~~~~~~~~~~l~~~i~~l-~~----~~~~~~~~~~~~~~~  384 (416)
T 1rrv_A          346 IGVAHDGPTPTFESLSAALTTV-LA----PETRARAEAVAGMVL  384 (416)
T ss_dssp             SEEECSSSCCCHHHHHHHHHHH-TS----HHHHHHHHHHTTTCC
T ss_pred             CccCCCCCCCCHHHHHHHHHHh-hC----HHHHHHHHHHHHHHh
Confidence            888874    589999999999 74    777777777666644

>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}

Probab=99.06  E-value=5.3e-10  Score=100.69  Aligned_cols=134  Identities=11%  Similarity=0.110  Sum_probs=96.6

Q ss_pred             CCCeEEEEEeecc---CCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHH
Q 011979          256 NRPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE  332 (473)
Q Consensus       256 ~~~~~i~~~G~~~---~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~  332 (473)
                      +++.++++.|+..   ..+.+..+++++..+                                +.+++++++++..+   
T Consensus        20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~--------------------------------~~~~~~~~g~~~~~---   64 (170)
T 2o6l_A           20 ENGVVVFSLGSMVSNMTEERANVIASALAQI--------------------------------PQKVLWRFDGNKPD---   64 (170)
T ss_dssp             TTCEEEEECCSCCTTCCHHHHHHHHHHHTTS--------------------------------SSEEEEECCSSCCT---
T ss_pred             CCCEEEEECCCCcccCCHHHHHHHHHHHHhC--------------------------------CCeEEEEECCcCcc---
Confidence            4566889999986   445566666666432                                25777777665322   


Q ss_pred             HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC----ccccceecCC
Q 011979          333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVDK  407 (473)
Q Consensus       333 ~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~----~~~e~i~~~~  407 (473)
                            .+ ++|.+.|+ ++.+++..+ ..||++|.   .+    -+.+++|||++|+|+|+.+..    +..+.+.+.+
T Consensus        65 ------~~~~~v~~~~~-~~~~~~l~~-~~ad~~I~---~~----G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g  129 (170)
T 2o6l_A           65 ------TLGLNTRLYKW-IPQNDLLGH-PKTRAFIT---HG----GANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARG  129 (170)
T ss_dssp             ------TCCTTEEEESS-CCHHHHHTS-TTEEEEEE---CC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTT
T ss_pred             ------cCCCcEEEecC-CCHHHHhcC-CCcCEEEE---cC----CccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcC
Confidence                  23 68999986 887554433 89999997   22    247999999999999999753    4566777888


Q ss_pred             ceEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          408 NGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       408 ~G~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      .|+.++    +.++++++|.+++++    ++    +++++++..
T Consensus       130 ~g~~~~~~~~~~~~l~~~i~~ll~~----~~----~~~~a~~~~  165 (170)
T 2o6l_A          130 AAVRVDFNTMSSTDLLNALKRVIND----PS----YKENVMKLS  165 (170)
T ss_dssp             SEEECCTTTCCHHHHHHHHHHHHHC----HH----HHHHHHHHC
T ss_pred             CeEEeccccCCHHHHHHHHHHHHcC----HH----HHHHHHHHH
Confidence            999986    689999999999985    54    455555543

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*

Probab=98.62  E-value=1.7e-05  Score=82.95  Aligned_cols=114  Identities=15%  Similarity=0.138  Sum_probs=75.1

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC----ccccceecC-CceEEeC--
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVD-KNGLLFS--  413 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~----~~~e~i~~~-~~G~~~~--  413 (473)
                      +|+.+.+ |+|+   ..+|..+++.++.   +++-  .++++|++++|+|+|+....    .....+.+. +.|+..+  
T Consensus       327 ~~~~vv~-w~Pq---~~vL~h~~v~~fv---tH~G--~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~  397 (454)
T 3hbf_A          327 TKGKIVA-WAPQ---VEILKHSSVGVFL---THSG--WNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNG  397 (454)
T ss_dssp             TTEEEES-SCCH---HHHHHSTTEEEEE---ECCC--HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGG
T ss_pred             CceEEEe-eCCH---HHHHhhcCcCeEE---ecCC--cchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCC
Confidence            5888885 7887   4788999965552   2221  34999999999999998642    234455553 7888874  


Q ss_pred             --CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccch----HHHHHHHHHHHHHHHh
Q 011979          414 --SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARW----ATEWEEHAKPLITEVI  468 (473)
Q Consensus       414 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w----~~~~~~~~~~~~~~~~  468 (473)
                        +.+++.+++.+++++     +..++|++++++..+...=    .-+=.+.++.+++++.
T Consensus       398 ~~~~~~l~~av~~ll~~-----~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~  453 (454)
T 3hbf_A          398 VLTKESIKKALELTMSS-----EKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT  453 (454)
T ss_dssp             SCCHHHHHHHHHHHHSS-----HHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHCC-----ChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence              589999999999984     3456677777765522211    1122233666666654

>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*

Probab=98.55  E-value=8.5e-06  Score=89.51  Aligned_cols=184  Identities=13%  Similarity=0.077  Sum_probs=124.1

Q ss_pred             ccCCCCCeEEEEEeeccCCCCHHH-HHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh--
Q 011979          252 FLKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--  328 (473)
Q Consensus       252 ~~~~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~--  328 (473)
                      .+.++.+ .++++.|+.+.|++++ ++..+..+.+                    +.+.+.....++.+++.|++...  
T Consensus       521 ~vdpd~l-~~~~vkRl~eYKRq~Lnil~ii~~~~~--------------------i~~~~~~~~~p~q~If~GKA~P~y~  579 (796)
T 1l5w_A          521 EINPQAI-FDIQIKRLHEYKRQHLNLLHILALYKE--------------------IRENPQADRVPRVFLFGAKAAPGYY  579 (796)
T ss_dssp             CCCTTSE-EEEEESCCCGGGTHHHHHHHHHHHHHH--------------------HHTCTTCCCCCEEEEEECCCCTTCH
T ss_pred             CcCCCcc-eEeeeecchhhcccCEeHHHHHHHHHH--------------------HhcCCCCCCCCeEEEEEecCChhHH
Confidence            3455555 8999999999999999 8888887654                    11111112245999999998532  


Q ss_pred             HH------HHHHHH----HcCC-C--cEEEecCCCCcccHHHHHhcCcEEEEeccCCC--CCCCcHHHHHHHhcCCcEEE
Q 011979          329 ES------YEEKIR----RLRL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCA  393 (473)
Q Consensus       329 ~~------l~~~~~----~~~l-~--~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~--~e~~p~kv~Eama~G~PvI~  393 (473)
                      ..      +.+.++    +-.. +  +|.|+.. .+.+-...++..||+.++   +|.  .|.+|+.-+=+|..|.+.|+
T Consensus       580 ~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~n-Y~vslA~~I~~gaDv~l~---~S~a~~EAsGTs~MKam~NGaL~iG  655 (796)
T 1l5w_A          580 LAKNIIFAINKVADVINNDPLVGDKLKVVFLPD-YCVSAAEKLIPAADISEQ---ISTAGKEASGTGNMKLALNGALTVG  655 (796)
T ss_dssp             HHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSS-CCHHHHHHHGGGCSEEEE---CCCTTTCCCCSHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHHHHHhccccccCCceEEEEECC-CCHHHHHHHhhhcceeec---CCCCCCCCCchHHHHHHHcCCeeec
Confidence            11      222332    1123 4  6888866 678888899999999999   564  79999999999999999999


Q ss_pred             eccCccccceec--CCceEEeC-CHHHHHHHHH------HHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Q 011979          394 VSYSCIEELVKV--DKNGLLFS-SSSELADQLL------MLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI  464 (473)
Q Consensus       394 ~~~~~~~e~i~~--~~~G~~~~-~~~~la~~i~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~  464 (473)
                      +-.|...|+..+  ..||+++. +++++.+.-.      .+..+   ++ ..+++..++..  ..++|++.  +.+.+|+
T Consensus       656 tLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~~y~a~~~y~~---~~-~~~~vvd~~~~--g~fs~~~~--~~y~~Ly  727 (796)
T 1l5w_A          656 TLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKK---DK-VLDAVLKELES--GKYSDGDK--HAFDQML  727 (796)
T ss_dssp             CSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHH---CH-HHHHHHHHHHH--TTTTTTCT--TTTHHHH
T ss_pred             CcCCeeeehhhccCCCcEEEecCCHHHHHHHHHcccCHHHHhhc---CH-HHHHHHHHHHc--CCCCCCcH--HHHHHHH
Confidence            876766666543  46999997 5666653211      22222   35 35555555554  26888765  3366666


Q ss_pred             HHHh
Q 011979          465 TEVI  468 (473)
Q Consensus       465 ~~~~  468 (473)
                      +.+.
T Consensus       728 ~~L~  731 (796)
T 1l5w_A          728 HSIG  731 (796)
T ss_dssp             HHTS
T ss_pred             HHHh
Confidence            6664

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*

Probab=98.53  E-value=2.5e-05  Score=81.69  Aligned_cols=112  Identities=16%  Similarity=0.124  Sum_probs=75.5

Q ss_pred             CcEEEecCCCCcccHHHHHh--cCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC----ccccceecC-CceEEeC
Q 011979          341 KRVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVD-KNGLLFS  413 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~--~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~----~~~e~i~~~-~~G~~~~  413 (473)
                      +|+.+.+ |+|+.   .+|.  ++|++|.    -.|   .++++|++++|+|+|+....    .....+.+. +.|+..+
T Consensus       325 ~~~~v~~-w~pq~---~vL~h~~~~~fvt----h~G---~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~  393 (456)
T 2c1x_A          325 GYGMVVP-WAPQA---EVLAHEAVGAFVT----HCG---WNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE  393 (456)
T ss_dssp             TTEEEES-CCCHH---HHHTSTTEEEEEE----CCC---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG
T ss_pred             CceEEec-CCCHH---HHhcCCcCCEEEe----cCC---cchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEec
Confidence            4788886 68874   5688  5567775    222   35999999999999998642    344556566 7888774


Q ss_pred             ----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccc--h--HHHHHHHHHHHHHHHh
Q 011979          414 ----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSAR--W--ATEWEEHAKPLITEVI  468 (473)
Q Consensus       414 ----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--w--~~~~~~~~~~~~~~~~  468 (473)
                          +.++++++|.+++++    ++ .++|++++++..+...  +  .-+=.+.+..+++++.
T Consensus       394 ~~~~~~~~l~~~i~~ll~~----~~-~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~  451 (456)
T 2c1x_A          394 GGVFTKSGLMSCFDQILSQ----EK-GKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS  451 (456)
T ss_dssp             GGSCCHHHHHHHHHHHHHS----HH-HHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHT
T ss_pred             CCCcCHHHHHHHHHHHHCC----Cc-HHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHH
Confidence                589999999999985    54 5677888777653321  1  0111234666666653

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10

Probab=98.46  E-value=3.5e-05  Score=80.98  Aligned_cols=113  Identities=16%  Similarity=0.183  Sum_probs=75.9

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC----cccccee-cCCceEEeC--
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVK-VDKNGLLFS--  413 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~----~~~e~i~-~~~~G~~~~--  413 (473)
                      +|+.+.+ |+|+.   .+|..+++.++.   +++-  .++++|++++|+|+|+....    .....+. +.+.|+..+  
T Consensus       353 ~~~~v~~-~~pq~---~~L~h~~~~~~v---th~G--~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~  423 (482)
T 2pq6_A          353 DRGLIAS-WCPQD---KVLNHPSIGGFL---THCG--WNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTN  423 (482)
T ss_dssp             TTEEEES-CCCHH---HHHTSTTEEEEE---ECCC--HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSS
T ss_pred             CCEEEEe-ecCHH---HHhcCCCCCEEE---ecCC--cchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCC
Confidence            5888886 69875   478777774441   2221  35999999999999998643    2334443 567888875  


Q ss_pred             -CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchH----HHHHHHHHHHHHHH
Q 011979          414 -SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWA----TEWEEHAKPLITEV  467 (473)
Q Consensus       414 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~----~~~~~~~~~~~~~~  467 (473)
                       +.+++.++|.+++++    ++ .++|++++++..+...=.    -+-.+.+..+++++
T Consensus       424 ~~~~~l~~~i~~ll~~----~~-~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~  477 (482)
T 2pq6_A          424 VKREELAKLINEVIAG----DK-GKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDV  477 (482)
T ss_dssp             CCHHHHHHHHHHHHTS----HH-HHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHcC----Cc-HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence             689999999999985    54 467888888766332210    12233466666655

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*

Probab=98.35  E-value=0.0005  Score=72.18  Aligned_cols=91  Identities=19%  Similarity=0.160  Sum_probs=61.4

Q ss_pred             EEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC----ccccce-ecCCceEEeC-----
Q 011979          344 AFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELV-KVDKNGLLFS-----  413 (473)
Q Consensus       344 ~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~----~~~e~i-~~~~~G~~~~-----  413 (473)
                      .+...|+|+.   .+|..+++.++.   +++-  .++++||+++|+|+|+....    .....+ ..-+.|+..+     
T Consensus       341 ~~v~~w~Pq~---~vL~h~~v~~fv---tHgG--~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~  412 (480)
T 2vch_A          341 FVIPFWAPQA---QVLAHPSTGGFL---THCG--WNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDG  412 (480)
T ss_dssp             EEEESCCCHH---HHHHSTTEEEEE---ECCC--HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTS
T ss_pred             EEEeCccCHH---HHhCCCCcCeEE---eccc--chhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCC
Confidence            3444578874   789999975552   2221  34999999999999998642    234443 5667777652     


Q ss_pred             --CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          414 --SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       414 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                        +.++++++|.+++++    + .-..+++++++..
T Consensus       413 ~~~~~~l~~av~~vl~~----~-~~~~~r~~a~~l~  443 (480)
T 2vch_A          413 LVRREEVARVVKGLMEG----E-EGKGVRNKMKELK  443 (480)
T ss_dssp             CCCHHHHHHHHHHHHTS----T-HHHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHhcC----c-chHHHHHHHHHHH
Confidence              479999999999984    2 2345666666554

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*

Probab=98.28  E-value=0.001  Score=69.52  Aligned_cols=76  Identities=17%  Similarity=0.124  Sum_probs=55.3

Q ss_pred             CcEEEecCCCCcccHHHHHh--cCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC----ccccc-eecCCceEEe-
Q 011979          341 KRVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEEL-VKVDKNGLLF-  412 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~--~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~----~~~e~-i~~~~~G~~~-  412 (473)
                      +++.+.+ |+|+.   .+|.  ++|++|.    -.|   .++++|++++|+|+|+....    ..... +...+.|+.. 
T Consensus       332 ~~~~v~~-w~pq~---~vL~h~~~~~fvt----h~G---~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~  400 (463)
T 2acv_A          332 GKGMICG-WAPQV---EVLAHKAIGGFVS----HCG---WNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLR  400 (463)
T ss_dssp             CSEEEES-SCCHH---HHHHSTTEEEEEE----CCC---HHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESC
T ss_pred             CCEEEEc-cCCHH---HHhCCCccCeEEe----cCC---chhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEe
Confidence            3788887 78875   4576  5666775    222   35999999999999998642    23444 4677788877 


Q ss_pred             -----C----CHHHHHHHHHHHHh
Q 011979          413 -----S----SSSELADQLLMLFK  427 (473)
Q Consensus       413 -----~----~~~~la~~i~~l~~  427 (473)
                           +    +.+++.++|.++++
T Consensus       401 ~~~~~~~~~~~~~~l~~ai~~ll~  424 (463)
T 2acv_A          401 VDYRKGSDVVAAEEIEKGLKDLMD  424 (463)
T ss_dssp             SSCCTTCCCCCHHHHHHHHHHHTC
T ss_pred             cccCCCCccccHHHHHHHHHHHHh
Confidence                 1    47899999999986

>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...

Probab=98.01  E-value=5.9e-05  Score=83.17  Aligned_cols=183  Identities=14%  Similarity=0.099  Sum_probs=121.6

Q ss_pred             ccCCCCCeEEEEEeeccCCCCHHHH-HHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh--
Q 011979          252 FLKPNRPALVVSSTSWTPDEDFGIL-LEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--  328 (473)
Q Consensus       252 ~~~~~~~~~i~~~G~~~~~K~~~~l-i~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~--  328 (473)
                      .+.++.+ +++++.|+.+.|+++++ +..+..+.+                    +.+.+.....+..+++.|++...  
T Consensus       545 ~vdpd~l-~~g~vkRl~eYKRq~L~~l~~i~~~~~--------------------i~~~~~~~~~p~q~If~GKA~P~y~  603 (824)
T 2gj4_A          545 HINPNSL-FDVQVKRIHEYKRQLLNCLHVITLYNR--------------------IKKEPNKFVVPRTVMIGGKAAPGYH  603 (824)
T ss_dssp             CCCTTSE-EEEEESCCCGGGTHHHHHHHHHHHHHH--------------------HHHCTTSCCCCEEEEEECCCCTTCH
T ss_pred             CcCCCcc-eEeeeecchhhcchhhHHHHHHHHHHH--------------------HHhCCCCCCCCEEEEEEEeCCHhHH
Confidence            3455565 89999999999999998 777776643                    00111111125899999998532  


Q ss_pred             HH------HHHHHHHcC----C-C--cEEEecCCCCcccHHHHHhcCcEEEEeccCCC--CCCCcHHHHHHHhcCCcEEE
Q 011979          329 ES------YEEKIRRLR----L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCA  393 (473)
Q Consensus       329 ~~------l~~~~~~~~----l-~--~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~--~e~~p~kv~Eama~G~PvI~  393 (473)
                      ..      +.+.++..+    + +  +|.|+.. .+.+-...++..||+.++   +|.  .|.+|+.-+=+|..|.+.|+
T Consensus       604 ~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~n-YdvslA~~I~~gaDv~l~---~S~ag~EAsGTs~MKamlNGaLtig  679 (824)
T 2gj4_A          604 MAKMIIKLITAIGDVVNHDPVVGDRLRVIFLEN-YRVSLAEKVIPAADLSEQ---ISTAGTEASGTGNMKFMLNGALTIG  679 (824)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETT-CCHHHHHHHGGGCSEEEE---CCCTTSCSCCSHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHHHHHhccCcccCCceEEEEECC-CCHHHHHHHhhhcceeec---CCCCCCCCCchHHHHHHHcCceEEE
Confidence            22      344444332    2 3  6888866 678888899999999999   564  79999999999999999999


Q ss_pred             eccCcccccee--cCCceEEeC-CHHHHHHHHH-------HHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHH
Q 011979          394 VSYSCIEELVK--VDKNGLLFS-SSSELADQLL-------MLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL  463 (473)
Q Consensus       394 ~~~~~~~e~i~--~~~~G~~~~-~~~~la~~i~-------~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  463 (473)
                      +-.|..-|+..  ...|||++. .++++ ..+.       .+.+.   +++ .+++-.++..  ..|+|...  +.+.+|
T Consensus       680 tlDGanvEi~e~vG~~Ngf~FG~~~~ev-~~l~~~~~~a~~~Y~~---~~~-l~~v~d~i~~--g~fs~~~~--~~y~~l  750 (824)
T 2gj4_A          680 TMDGANVEMAEEAGEENFFIFGMRVEDV-DRLDQRGYNAQEYYDR---IPE-LRQIIEQLSS--GFFSPKQP--DLFKDI  750 (824)
T ss_dssp             CSCTTHHHHHHHHCGGGSEECSCCHHHH-HHHHHHCCCHHHHHHH---CHH-HHHHHHHHHH--TTTCTTST--TTTHHH
T ss_pred             EecCccchhhhccCCCCEEEeCCcHHHH-HHHHHcCCCHHHHhcC---CHH-HHHHHHHHHh--CCCCCCCh--HHHHHH
Confidence            87666556543  356899997 46666 4442       23332   333 3343444443  36888776  336666


Q ss_pred             HHHHh
Q 011979          464 ITEVI  468 (473)
Q Consensus       464 ~~~~~  468 (473)
                      ++++.
T Consensus       751 y~~l~  755 (824)
T 2gj4_A          751 VNMLM  755 (824)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66654

>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*

Probab=97.96  E-value=0.00069  Score=66.24  Aligned_cols=66  Identities=12%  Similarity=0.095  Sum_probs=51.6

Q ss_pred             EEEEEcCCC-ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc
Q 011979          318 LFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY  396 (473)
Q Consensus       318 ~l~ivG~g~-~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~  396 (473)
                      -.+++|.+. ..+++++.+++.  +++.+.++   .++++++|..||+.|.   .  +   |+++.|++++|+|+|....
T Consensus       186 i~vv~G~~~~~~~~l~~~~~~~--~~v~v~~~---~~~m~~~m~~aDlvI~---~--g---G~T~~E~~~~g~P~i~ip~  252 (282)
T 3hbm_A          186 ISIATSSSNPNLKKLQKFAKLH--NNIRLFID---HENIAKLMNESNKLII---S--A---SSLVNEALLLKANFKAICY  252 (282)
T ss_dssp             EEEEECTTCTTHHHHHHHHHTC--SSEEEEES---CSCHHHHHHTEEEEEE---E--S---SHHHHHHHHTTCCEEEECC
T ss_pred             EEEEECCCchHHHHHHHHHhhC--CCEEEEeC---HHHHHHHHHHCCEEEE---C--C---cHHHHHHHHcCCCEEEEeC
Confidence            446677764 356666666543  48999988   7999999999999997   2  2   4699999999999999764

>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}

Probab=97.92  E-value=3.5e-05  Score=84.69  Aligned_cols=183  Identities=13%  Similarity=0.056  Sum_probs=119.8

Q ss_pred             ccCCCCCeEEEEEeeccCCCCHHH-HHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh--
Q 011979          252 FLKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--  328 (473)
Q Consensus       252 ~~~~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~--  328 (473)
                      .+.++.+ .++++.|+.+.|++++ ++..+..+.+                    +.+.+.....++.+++.|++...  
T Consensus       511 ~vdpd~l-~~~~vkRlheYKRq~Lnil~ii~~~~~--------------------i~~~~~~~~~p~q~If~GKA~P~y~  569 (796)
T 2c4m_A          511 EIDPESI-FDVQIKRLHEYKRQLMNALYVLDLYFR--------------------IKEDGLTDIPARTVIFGAKAAPGYV  569 (796)
T ss_dssp             CCCTTSE-EEEEECCCCGGGTHHHHHHHHHHHHHH--------------------HHTSCCCSSCCEEEEEECCCCTTCH
T ss_pred             CCCCCCc-EEEEeecchhhcccCEeHHHHHHHHHH--------------------HhhCCCCCCCCeEEEEEecCCHhHH
Confidence            3455655 8999999999999999 8888887754                    11111111245899999998532  


Q ss_pred             HH------HHHHHH----HcCC-C--cEEEecCCCCcccHHHHHhcCcEEEEeccCCC--CCCCcHHHHHHHhcCCcEEE
Q 011979          329 ES------YEEKIR----RLRL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCA  393 (473)
Q Consensus       329 ~~------l~~~~~----~~~l-~--~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~--~e~~p~kv~Eama~G~PvI~  393 (473)
                      ..      +.+.++    +-.. +  +|.|+.. .+.+-...++..||+.++   +|.  .|.+|+.-+=+|..|.+.|+
T Consensus       570 ~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~n-Y~vslA~~I~~gaDv~l~---~S~a~~EAsGTs~MKam~NGaL~iG  645 (796)
T 2c4m_A          570 RAKAIIKLINSIADLVNNDPEVSPLLKVVFVEN-YNVSPAEHILPASDVSEQ---ISTAGKEASGTSNMKFMMNGALTLG  645 (796)
T ss_dssp             HHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETT-CCHHHHHHHGGGCSEEEE---CCCTTSCSCCHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHHHHHhccccccCCceEEEEECC-CCHHHHHHHhhhcceeec---CCCCCCCCCchHHHHHHHcCCeEEe
Confidence            11      233333    0123 4  6888876 678888899999999999   564  79999999999999999999


Q ss_pred             eccCccccceec--CCceEEeCC----HHHHHHH---HHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Q 011979          394 VSYSCIEELVKV--DKNGLLFSS----SSELADQ---LLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI  464 (473)
Q Consensus       394 ~~~~~~~e~i~~--~~~G~~~~~----~~~la~~---i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~  464 (473)
                      +-.|...|+..+  ..|||++..    +.++..+   ...+-+    ++ ..+++..++..  ..++|++.  +.+.+|+
T Consensus       646 tLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~y~a~~~y~~----~~-~~~~vvd~~~~--g~fs~~~~--~~y~~Ly  716 (796)
T 2c4m_A          646 TMDGANVEIVDSVGEENAYIFGARVEELPALRESYKPYELYET----VP-GLKRALDALDN--GTLNDNNS--GLFYDLK  716 (796)
T ss_dssp             ESSTHHHHHHHHHCGGGSEEESCCTTTHHHHHHTCCHHHHHHH----ST-THHHHHHTTTS--SSSCCTTC--CHHHHHH
T ss_pred             ccCCeEeehhhhcCCCcEEEecCchhhHHHHHHhhChHHHhhc----CH-HHHHHHHHHHc--CCCCCCCH--HHHHHHH
Confidence            876766666543  469999962    4444332   111222    23 23333333333  36888765  2366666


Q ss_pred             HHHh
Q 011979          465 TEVI  468 (473)
Q Consensus       465 ~~~~  468 (473)
                      +.++
T Consensus       717 ~~L~  720 (796)
T 2c4m_A          717 HSLI  720 (796)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6654

>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7

Probab=97.88  E-value=0.00059  Score=67.72  Aligned_cols=101  Identities=16%  Similarity=0.165  Sum_probs=69.3

Q ss_pred             CCCeEEEEEee-ccCCCCHH--HHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHH
Q 011979          256 NRPALVVSSTS-WTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE  332 (473)
Q Consensus       256 ~~~~~i~~~G~-~~~~K~~~--~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~  332 (473)
                      +++.+++..|+ ..+.|.+.  .+.++++.+.+                             .+++++++|...+.+..+
T Consensus       179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~-----------------------------~~~~vvl~g~~~e~~~~~  229 (348)
T 1psw_A          179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID-----------------------------EGYQVVLFGSAKDHEAGN  229 (348)
T ss_dssp             SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH-----------------------------TTCEEEECCCGGGHHHHH
T ss_pred             CCcEEEEECCCCccccCCCCHHHHHHHHHHHHH-----------------------------CCCeEEEEeChhhHHHHH
Confidence            35667777787 55666654  77777777765                             267889998655544444


Q ss_pred             HHHHHcC----CCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe
Q 011979          333 EKIRRLR----LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV  394 (473)
Q Consensus       333 ~~~~~~~----l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~  394 (473)
                      +..+..+    ...+.+.|. .+-.++..+++.||++|.   .+++     .+-.|.|+|+|+|+-
T Consensus       230 ~i~~~~~~~~~~~~~~l~g~-~sl~e~~ali~~a~l~I~---~Dsg-----~~HlAaa~g~P~v~l  286 (348)
T 1psw_A          230 EILAALNTEQQAWCRNLAGE-TQLDQAVILIAACKAIVT---NDSG-----LMHVAAALNRPLVAL  286 (348)
T ss_dssp             HHHTTSCHHHHTTEEECTTT-SCHHHHHHHHHTSSEEEE---ESSH-----HHHHHHHTTCCEEEE
T ss_pred             HHHHhhhhccccceEeccCc-CCHHHHHHHHHhCCEEEe---cCCH-----HHHHHHHcCCCEEEE
Confidence            4443322    123456676 888999999999999998   3444     233399999999996

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=97.85  E-value=0.00034  Score=77.26  Aligned_cols=260  Identities=13%  Similarity=0.055  Sum_probs=142.8

Q ss_pred             HhhCCCeEEEEecCchhhhhhhhcCC----CchHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCc-eEEeeCCCC
Q 011979          123 SSLRRSAFIVDWHNFGYTLLSLSLGR----RSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPP  197 (473)
Q Consensus       123 ~~~~~~~~i~~~h~~~~~~~~~~~~~----~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~g~~-~~vi~n~~~  197 (473)
                      .+..+..+|.+||+.+...+......    ........+.+. ...+..|.+++.|+.+.+.+.+.++.+ -.++..|-|
T Consensus       432 ~k~~~~~~iq~wHG~~lK~~g~d~~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~P  510 (729)
T 3l7i_A          432 NKKENQTYIQTWHGTPLKRLANDMKVVRMPGTTTPKYKRNFN-RETSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYP  510 (729)
T ss_dssp             CCCTTCEEEECCSSCCSBCCGGGCSCCCCTTCCHHHHHHHHH-HHHTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCG
T ss_pred             ccCCCcEEEECCCCCchhhccccccccccccccCHHHHHHHH-HhhccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCC
Confidence            34456788999999853222111110    011111111111 223567999999999999999888886 567777743


Q ss_pred             --C-Ccc-cCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCC-
Q 011979          198 --E-FFH-PTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDED-  272 (473)
Q Consensus       198 --~-~f~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~-  272 (473)
                        + .|. +...+.+.+++++++                                    ++++++ +|+|.-++..... 
T Consensus       511 R~D~l~~~~~~~~~~~~~~~~~~------------------------------------~~~~kk-~ILyaPT~r~~~~~  553 (729)
T 3l7i_A          511 RNDVLVNRANDQEYLDEIRTHLN------------------------------------LPSDKK-VIMYAPTWRDDEFV  553 (729)
T ss_dssp             GGHHHHHSTTCHHHHHHHHHHTT------------------------------------CCSSCE-EEEECCCCCGGGCC
T ss_pred             chHHHhcccchHHHHHHHHHHhC------------------------------------CCCCCe-EEEEeeeeeCCccc
Confidence              2 232 223334555666654                                    334444 8999988776421 


Q ss_pred             --------HHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHHHHcCC-CcE
Q 011979          273 --------FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRV  343 (473)
Q Consensus       273 --------~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l-~~V  343 (473)
                              ...-++.+....                             .++..+++-.- |.   +.+.....+. +.+
T Consensus       554 ~~~~~~~~~~~~~~~l~~~l-----------------------------~~~~~li~r~H-p~---~~~~~~~~~~~~~~  600 (729)
T 3l7i_A          554 SKGKYLFELKIDLDNLYKEL-----------------------------GDDYVILLRMH-YL---ISNALDLSGYENFA  600 (729)
T ss_dssp             GGGSSCCCCTTCHHHHHHHH-----------------------------TTTEEEEECCC-HH---HHTTCCCTTCTTTE
T ss_pred             cccccccchhhHHHHHHHHc-----------------------------CCCeEEEEecC-cc---hhccccccccCCcE
Confidence                    111122222211                             24677776543 11   1111111122 344


Q ss_pred             EEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC---------ccccceecCCceEEeCC
Q 011979          344 AFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS---------CIEELVKVDKNGLLFSS  414 (473)
Q Consensus       344 ~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~---------~~~e~i~~~~~G~~~~~  414 (473)
                      .-...   ..++.+++..||++|.   ..+     ..++|++..++|||.....         |.-.-..+..-|-++.|
T Consensus       601 ~~~~~---~~di~~ll~~aD~lIT---DyS-----Sv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~~~~  669 (729)
T 3l7i_A          601 IDVSN---YNDVSELFLISDCLIT---DYS-----SVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPIYTE  669 (729)
T ss_dssp             EECTT---CSCHHHHHHTCSEEEE---SSC-----THHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCEESS
T ss_pred             EeCCC---CcCHHHHHHHhCEEEe---ech-----HHHHhHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCeECC
Confidence            44433   5799999999999997   333     3899999999999987321         11111122345677788


Q ss_pred             HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHh
Q 011979          415 SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI  468 (473)
Q Consensus       415 ~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~  468 (473)
                      .++|.++|......   +.+..++..+-..++. .+.=.++-+++++.+++...
T Consensus       670 ~~eL~~~i~~~~~~---~~~~~~~~~~~~~~~~-~~~dg~as~ri~~~i~~~~~  719 (729)
T 3l7i_A          670 PYGLAKELKNLDKV---QQQYQEKIDAFYDRFC-SVDNGKASQYIGDLIHKDIK  719 (729)
T ss_dssp             HHHHHHHHTTHHHH---HHHTHHHHHHHHHHHS-TTCCSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhcc---chhHHHHHHHHHHHhC-CccCChHHHHHHHHHHhcCc
Confidence            99999999887653   1122222333333322 23334566777777666543

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*

Probab=97.85  E-value=0.00033  Score=77.41  Aligned_cols=142  Identities=14%  Similarity=0.089  Sum_probs=106.3

Q ss_pred             CCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCC-ChHHHHHHHHHcCC--CcEEEe
Q 011979          270 DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKESYEEKIRRLRL--KRVAFR  346 (473)
Q Consensus       270 ~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~-~~~~l~~~~~~~~l--~~V~~~  346 (473)
                      .|=-+..++.+..+.++                           .|+-+|++...+. ....+++.+++.|+  ++|.|.
T Consensus       533 ~Ki~p~~~~~W~~IL~~---------------------------vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~  585 (723)
T 4gyw_A          533 YKIDPSTLQMWANILKR---------------------------VPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFS  585 (723)
T ss_dssp             GGCCHHHHHHHHHHHHH---------------------------CSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEE
T ss_pred             ccCCHHHHHHHHHHHHh---------------------------CCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEEC
Confidence            45566777888877774                           6999998887653 35678888999998  699999


Q ss_pred             cCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCcccc-----ce-ecCCceEEeCCHHHHHH
Q 011979          347 TMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE-----LV-KVDKNGLLFSSSSELAD  420 (473)
Q Consensus       347 g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e-----~i-~~~~~G~~~~~~~~la~  420 (473)
                      +. .+.++....++.+|+++=    +...+=+++.+||+.+|+|||+-....+..     ++ .-|-.-+++.|.++..+
T Consensus       586 ~~-~~~~~~l~~~~~~Di~LD----t~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~~~~~Y~~  660 (723)
T 4gyw_A          586 PV-APKEEHVRRGQLADVCLD----TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYED  660 (723)
T ss_dssp             EC-CCHHHHHHHGGGCSEEEC----CSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCSSHHHHHH
T ss_pred             CC-CCHHHHHHHhCCCeEEeC----CCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccCCHHHHHH
Confidence            88 999999999999999996    322234689999999999999975322111     00 01223356678999999


Q ss_pred             HHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          421 QLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       421 ~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      .-.++.++    ++.+.++++..++..
T Consensus       661 ~a~~la~d----~~~l~~lr~~l~~~~  683 (723)
T 4gyw_A          661 IAVKLGTD----LEYLKKVRGKVWKQR  683 (723)
T ss_dssp             HHHHHHHC----HHHHHHHHHHHHHHH
T ss_pred             HHHHHhcC----HHHHHHHHHHHHHHH
Confidence            99999985    888888887776543

>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}

Probab=97.79  E-value=0.0023  Score=64.26  Aligned_cols=104  Identities=15%  Similarity=0.193  Sum_probs=72.7

Q ss_pred             CCCCCeEEEEEeeccCCCCH--HHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHH
Q 011979          254 KPNRPALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY  331 (473)
Q Consensus       254 ~~~~~~~i~~~G~~~~~K~~--~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l  331 (473)
                      .++++.+++..|.-...|.+  +.+.+.++.+.++                             +.+++++|...+.+..
T Consensus       182 ~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~-----------------------------g~~vvl~g~~~e~~~~  232 (349)
T 3tov_A          182 TDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL-----------------------------GYKTVFFGGPMDLEMV  232 (349)
T ss_dssp             CTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH-----------------------------TCEEEECCCTTTHHHH
T ss_pred             CCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC-----------------------------CCeEEEEeCcchHHHH
Confidence            34466677777764445554  5677777777652                             4678888876666656


Q ss_pred             HHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec
Q 011979          332 EEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS  395 (473)
Q Consensus       332 ~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~  395 (473)
                      ++..+..+...+.+.|. .+-.++..+++.||++|.   ..++   + .-+ |.|+|+|+|+--
T Consensus       233 ~~i~~~~~~~~~~l~g~-~sl~e~~ali~~a~~~i~---~DsG---~-~Hl-Aaa~g~P~v~lf  287 (349)
T 3tov_A          233 QPVVEQMETKPIVATGK-FQLGPLAAAMNRCNLLIT---NDSG---P-MHV-GISQGVPIVALY  287 (349)
T ss_dssp             HHHHHTCSSCCEECTTC-CCHHHHHHHHHTCSEEEE---ESSH---H-HHH-HHTTTCCEEEEC
T ss_pred             HHHHHhcccccEEeeCC-CCHHHHHHHHHhCCEEEE---CCCC---H-HHH-HHhcCCCEEEEE
Confidence            66666554344666776 888999999999999998   3344   2 334 899999999963

>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A

Probab=96.58  E-value=0.0016  Score=61.52  Aligned_cols=73  Identities=10%  Similarity=0.014  Sum_probs=51.9

Q ss_pred             cEEEecCCCCcccHHHHHh-cCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc---c-----ccceecCCceEEe
Q 011979          342 RVAFRTMWLSAEDYPLLLG-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC---I-----EELVKVDKNGLLF  412 (473)
Q Consensus       342 ~V~~~g~~v~~~~i~~~l~-~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~---~-----~e~i~~~~~G~~~  412 (473)
                      ++...++   .+++..+|. .||++|.    -.|   ..+++|++++|+|.|......   .     ++.+.+.+.+++.
T Consensus       115 ~v~v~~f---~~~m~~~l~~~AdlvIs----haG---agTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~  184 (224)
T 2jzc_A          115 KVIGFDF---STKMQSIIRDYSDLVIS----HAG---TGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC  184 (224)
T ss_dssp             EEEECCS---SSSHHHHHHHHCSCEEE----SSC---HHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE
T ss_pred             eEEEeec---cchHHHHHHhcCCEEEE----CCc---HHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc
Confidence            5666666   589999999 9999997    223   359999999999999987532   1     2334333445554


Q ss_pred             CCHHHHHHHHHHH
Q 011979          413 SSSSELADQLLML  425 (473)
Q Consensus       413 ~~~~~la~~i~~l  425 (473)
                       +++.|+++|..+
T Consensus       185 -~~~~L~~~i~~l  196 (224)
T 2jzc_A          185 -APTETGLIAGLR  196 (224)
T ss_dssp             -CSCTTTHHHHHH
T ss_pred             -CHHHHHHHHHHH
Confidence             567777777776

>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*

Probab=94.03  E-value=0.056  Score=52.93  Aligned_cols=132  Identities=11%  Similarity=0.035  Sum_probs=78.4

Q ss_pred             CCCeEEEEEeeccCCCCHH--HHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHH-HH
Q 011979          256 NRPALVVSSTSWTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES-YE  332 (473)
Q Consensus       256 ~~~~~i~~~G~~~~~K~~~--~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~-l~  332 (473)
                      +++.+++..|.-...|.+.  .+.+.++.+.+                             .++++++++.++.... .+
T Consensus       177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~-----------------------------~~~~vvl~~g~~~e~~~~~  227 (326)
T 2gt1_A          177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLAD-----------------------------SGIRIKLPWGAPHEEERAK  227 (326)
T ss_dssp             TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTT-----------------------------TCCEEEECCSSHHHHHHHH
T ss_pred             CCCEEEEEeCCCCccccCCHHHHHHHHHHHHH-----------------------------CCCcEEEecCCHHHHHHHH
Confidence            3555666666655556544  56566665533                             3578888743443333 33


Q ss_pred             HHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccc----------cc
Q 011979          333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE----------EL  402 (473)
Q Consensus       333 ~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~----------e~  402 (473)
                      +..+..  +++.+.|. .+-.++..+++.||++|.   ..+|   + .=+ |.|+|+|+|+--.+..+          .+
T Consensus       228 ~i~~~~--~~~~l~g~-~sl~el~ali~~a~l~I~---~DSG---~-~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~  296 (326)
T 2gt1_A          228 RLAEGF--AYVEVLPK-MSLEGVARVLAGAKFVVS---VDTG---L-SHL-TAALDRPNITVYGPTDPGLIGGYGKNQMV  296 (326)
T ss_dssp             HHHTTC--TTEEECCC-CCHHHHHHHHHTCSEEEE---ESSH---H-HHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEE
T ss_pred             HHHhhC--CcccccCC-CCHHHHHHHHHhCCEEEe---cCCc---H-HHH-HHHcCCCEEEEECCCChhhcCCCCCCceE
Confidence            333322  46777777 889999999999999998   3344   2 334 77799999986211111          11


Q ss_pred             eecCCceEEeC-CHHHHHHHHHHHHhC
Q 011979          403 VKVDKNGLLFS-SSSELADQLLMLFKG  428 (473)
Q Consensus       403 i~~~~~G~~~~-~~~~la~~i~~l~~~  428 (473)
                      +. +...-+-+ ++++..+++.++++.
T Consensus       297 ~~-~~~~cm~~I~~~~V~~~i~~~l~~  322 (326)
T 2gt1_A          297 CR-APGNELSQLTANAVKQFIEENAEK  322 (326)
T ss_dssp             EE-CGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred             ec-CCcccccCCCHHHHHHHHHHHHHH
Confidence            11 11111112 588888888887763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	473
d2bisa1	437	c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro	1e-04

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

 Score = 42.1 bits (97), Expect = 1e-04
 Identities = 33/162 (20%), Positives = 58/162 (35%), Gaps = 10/162 (6%)

Query: 311 QYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHT 370
           +  +  + FII GKG  +     +    +   V   T  LS E    L GS D    +  
Sbjct: 278 KKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVD---FVII 334

Query: 371 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKG 428
            S      +  ++    G    A +   + +++  ++ G+L       ELA+ +L   + 
Sbjct: 335 PSYFEPFGLVALEAMCLGAIPIASAVGGLRDIIT-NETGILVKAGDPGELANAILKALE- 392

Query: 429 FPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQ 470
                  L K R    +  +S  W    E + K   T  I +
Sbjct: 393 --LSRSDLSKFRENCKKRAMSFSWEKSAERYVK-AYTGSIDR 431

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	473
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	100.0
d2iw1a1	370	Lipopolysaccharide core biosynthesis protein RfaG	100.0
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	100.0
d2bfwa1	196	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.89
d2f9fa1	166	First mannosyl transferase WbaZ {Archaeoglobus ful	99.88
d1uqta_	456	Trehalose-6-phosphate synthase, OtsA {Escherichia	99.83
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	99.34
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	99.01
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	98.84
d1v4va_	373	UDP-N-acetylglucosamine 2-epimerase {Thermus therm	98.84
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	98.66
d1o6ca_	377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	98.61
d1f6da_	376	UDP-N-acetylglucosamine 2-epimerase {Escherichia c	98.41
d2acva1	461	Triterpene UDP-glucosyl transferase UGT71G1 {Medic	98.37
d2c1xa1	450	UDP glucose:flavonoid 3-o-glucosyltransferase {Gra	98.16
d2pq6a1	473	(Iso)flavonoid glycosyltransferase {Medicago trunc	97.72
d1pswa_	348	ADP-heptose LPS heptosyltransferase II {Escherichi	97.26
d2vcha1	471	Hydroquinone glucosyltransferase {Thale cress (Ara	97.15
d2gj4a1	824	Glycogen phosphorylase {Rabbit (Oryctolagus cunicu	95.77
d1l5wa_	796	Maltodextrin phosphorylase (MALP) {Escherichia col	95.53
d1ygpa_	876	Glycogen phosphorylase {Baker's yeast (Saccharomyc	89.64
d2djia1	177	Pyruvate oxidase {Aerococcus viridans [TaxId: 1377	86.75
d2ez9a1	183	Pyruvate oxidase {Lactobacillus plantarum [TaxId:	82.1
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	81.78

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=100.00  E-value=1e-33  Score=288.94  Aligned_cols=383  Identities=18%  Similarity=0.126  Sum_probs=250.9

Q ss_pred             CCCChhHHH-HHHHHHhhCCCcEEEEecCCCCCCccc-----------------ccCCCEEEEEeecCCC--CCCCCcch
Q 011979           15 LGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAI-----------------LEHPSIHIHTMTQWPT--IPRGLPKV   74 (473)
Q Consensus        15 ~g~s~r~~~-~a~~L~~~~g~eV~vi~~~~~~~~~~~-----------------~~~~~i~i~~~~~~~~--~~~~~~~~   74 (473)
                      .||.+++.+ ++..|+++ ||+|+|+++.......+.                 ....++.++++.....  .....+..
T Consensus        15 ~GG~~~~~~~La~~L~~~-Gh~V~Vvtp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (437)
T d2bisa1          15 VGGLAEALTAISEALASL-GHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGW   93 (437)
T ss_dssp             SSSHHHHHHHHHHHHHHT-TCEEEEEEECTTSSCCEEEEEEECSSSEEEEEEEEEEETTEEEEEEESSGGGCSCTTCSHH
T ss_pred             cCCHHHHHHHHHHHHHHc-CCEEEEEecCCCccchhhccceeecccccceeeeeeccCCeEEEecCccccccccccccch
Confidence            466666554 57788887 999999996543221111                 1234566666653211  11111111


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhh---hcCCCch
Q 011979           75 LKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSL---SLGRRSH  151 (473)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~---~~~~~~~  151 (473)
                      .................+..++.....||+||+|++   .+..++.++++..++|+|++.|+..+.....   .......
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~---~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~  170 (437)
T d2bisa1          94 DGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDW---HTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSE  170 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETG---GGHHHHHHHHHHHCCCEEEEESSCCCCCEEHHHHHHTTCGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCh---hhhhHhhhhhccccCceeEEEeeccccccchhhhhhccchh
Confidence            111111111112222334445544467899999984   3444577777888999999999985311000   0000000


Q ss_pred             H-HHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHh---CCceEEeeCC-CCCCcccC----C-hhHHHHHHHhhhhhccC
Q 011979          152 F-VSIYRWIEKYYGKMANGCLCVTQAMQHELAQNW---GIKATVLYDQ-PPEFFHPT----S-LEEKHELFCRLNKILHQ  221 (473)
Q Consensus       152 ~-~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~---g~~~~vi~n~-~~~~f~~~----~-~~~~~~l~~~l~~~~~~  221 (473)
                      . .......++...+.+|.+++++..........+   ..++.+++|+ +.+.|.+.    . .+.+..++.+++     
T Consensus       171 ~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~-----  245 (437)
T d2bisa1         171 LAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFG-----  245 (437)
T ss_dssp             GCCSSEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTT-----
T ss_pred             hhhHHHHHHHHHHHHhhhhhcccchhhhhhhhhhhccccCceEEEecccccccccccccchhhHHHHHhhhhhhh-----
Confidence            0 000112355666789999999998876655443   3448999999 44555443    1 112333443333     


Q ss_pred             CCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccC-CCCHHHHHHHHHHhHHHHHhhhccCCCchhh
Q 011979          222 PLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEE  300 (473)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~-~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~  300 (473)
                                                      .. ....++|+|++.. .||++.+++|+..+..+              
T Consensus       246 --------------------------------~~-~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~--------------  278 (437)
T d2bisa1         246 --------------------------------MD-EGVTFMFIGRFDRGQKGVDVLLKAIEILSSK--------------  278 (437)
T ss_dssp             --------------------------------CC-SCEEEEEESCBCSSSSCHHHHHHHHHHHTTS--------------
T ss_pred             --------------------------------cc-CCceEEEeecccccchhHHHHHhhhcccccc--------------
Confidence                                            11 2238999999965 69999999999987431              


Q ss_pred             HHHhhhccCccccCCCEEEEEEcCCCChHH-HHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcH
Q 011979          301 VFLKEISDGKQYLYPRLLFIITGKGPDKES-YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPM  379 (473)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~-l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~  379 (473)
                                 ...++++|+|+|.|+.... ..+.... ..+++.+.+++++.+++..+++.||++++   +|..|++|+
T Consensus       279 -----------~~~~~~~lvi~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~adi~v~---~s~~e~~~~  343 (437)
T d2bisa1         279 -----------KEFQEMRFIIIGKGDPELEGWARSLEE-KHGNVKVITEMLSREFVRELYGSVDFVII---PSYFEPFGL  343 (437)
T ss_dssp             -----------GGGGGEEEEEECCBCHHHHHHHHHHHH-TCTTEEEECSCCCHHHHHHHHTTCSEEEE---CCSCCSSCH
T ss_pred             -----------cccccceeeeecccccccccchhhhcc-ccccceeccccCcHHHHHHHHhhhccccc---cccccccch
Confidence                       0247899999999875422 2222222 23344444444999999999999999999   788899999


Q ss_pred             HHHHHHhcCCcEEEeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHH
Q 011979          380 KVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWE  457 (473)
Q Consensus       380 kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~  457 (473)
                      +++|||+||+|||+++.|+..|++.+ .+|++++  |+++++++|.+++++   |++.+++|++++++..++|+|++..+
T Consensus       344 ~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d~~~la~~i~~ll~~---~~~~~~~~~~~~~~~~~~~s~~~~a~  419 (437)
T d2bisa1         344 VALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALEL---SRSDLSKFRENCKKRAMSFSWEKSAE  419 (437)
T ss_dssp             HHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTTCHHHHHHHHHHHHTT---TTSCTHHHHHHHHHHHHHSCHHHHHH
T ss_pred             HHHHHHHCCCCEEEeCCCCcHHhEEC-CcEEEECCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence            99999999999999999999998875 5899985  799999999999875   57789999999999888899999887


Q ss_pred             HHHHHHHHHHhhccCC
Q 011979          458 EHAKPLITEVISQFDD  473 (473)
Q Consensus       458 ~~~~~~~~~~~~~~~~  473 (473)
                      ++.+ +++.++.+..|
T Consensus       420 ~~~~-iY~~~i~r~~~  434 (437)
T d2bisa1         420 RYVK-AYTGSIDRAFD  434 (437)
T ss_dssp             HHHH-HHHTCSCCBCT
T ss_pred             HHHH-HHHHHHHhHhh
Confidence            7554 67777766543

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.9e-33  Score=278.17  Aligned_cols=341  Identities=12%  Similarity=0.047  Sum_probs=230.0

Q ss_pred             CCCCChhHH-HHHHHHHhhCCCcEEEEecCCCCCCcccccCCCEEEEEeecCCCCCCCCcchhHHHHHHHHHHHHHHHHH
Q 011979           14 DLGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLL   92 (473)
Q Consensus        14 ~~g~s~r~~-~~a~~L~~~~g~eV~vi~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (473)
                      .+||.+|.. ..|..|+++ ||+|+|+|......     ...+++++.++.     ............. ..       +
T Consensus        11 p~GG~e~~~~~la~~L~~~-G~~V~v~~~~~~~~-----~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~-------~   71 (370)
T d2iw1a1          11 PFGGLQRDFMRIASTVAAR-GHHVRVYTQSWEGD-----CPKAFELIQVPV-----KSHTNHGRNAEYY-AW-------V   71 (370)
T ss_dssp             TTCHHHHHHHHHHHHHHHT-TCCEEEEESEECSC-----CCTTCEEEECCC-----CCSSHHHHHHHHH-HH-------H
T ss_pred             CCCCHHHHHHHHHHHHHHC-CCEEEEEecCCCCC-----CCCceEEEEcCc-----cccccchhhHHHH-HH-------H
Confidence            367776666 457888887 99999999653321     134778888772     1111111111111 11       1


Q ss_pred             HHHhhhhCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhh-hhhhc---CCCchHHHHHHHHHHHHh--hc
Q 011979           93 WFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTL-LSLSL---GRRSHFVSIYRWIEKYYG--KM  166 (473)
Q Consensus        93 ~~~~~~~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~-~~~~~---~~~~~~~~~~~~~e~~~~--~~  166 (473)
                      ...+ +..++|+|+.+..+..  .            . ++..++..+.. .....   .........+...++...  ..
T Consensus        72 ~~~~-~~~~~d~v~~~~~~~~--~------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (370)
T d2iw1a1          72 QNHL-KEHPADRVVGFNKMPG--L------------D-VYFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGK  135 (370)
T ss_dssp             HHHH-HHSCCSEEEESSCCTT--C------------S-EEECCSCCHHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTC
T ss_pred             HHHH-HhcccceeeecccCch--H------------H-HHHHhhcccceeeeeecCccccccchhchhHHHHHHHHhhcc
Confidence            1111 2378999998764221  0            0 11111110000 00000   001111122223333322  35


Q ss_pred             CCEEEEcCHHHHHHHHHHhCCc---eEEeeCCCC-CCcc-cCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccch
Q 011979          167 ANGCLCVTQAMQHELAQNWGIK---ATVLYDQPP-EFFH-PTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADET  241 (473)
Q Consensus       167 ad~vi~vS~~~~~~l~~~~g~~---~~vi~n~~~-~~f~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (473)
                      ++.+++.++.....+.+.++.+   +.+++|+.+ +.+. +.....+..++..++                         
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~-------------------------  190 (370)
T d2iw1a1         136 STKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNG-------------------------  190 (370)
T ss_dssp             CCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTT-------------------------
T ss_pred             CceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhccC-------------------------
Confidence            7889999999988888877765   789999843 3332 233334555555544                         


Q ss_pred             hhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEE
Q 011979          242 IFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII  321 (473)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i  321 (473)
                                 ++++++ +++++|++.+.||++.+++|+..+.++                           .++..+.+
T Consensus       191 -----------~~~~~~-~i~~~gr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~~~i  231 (370)
T d2iw1a1         191 -----------IKEQQN-LLLQVGSDFGRKGVDRSIEALASLPES---------------------------LRHNTLLF  231 (370)
T ss_dssp             -----------CCTTCE-EEEEECSCTTTTTHHHHHHHHHTSCHH---------------------------HHHTEEEE
T ss_pred             -----------CCccce-EEEEEeccccccchhhhcccccccccc---------------------------cccceeee
Confidence                       233343 899999999999999999999998763                           45667777


Q ss_pred             EcCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccc
Q 011979          322 TGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE  400 (473)
Q Consensus       322 vG~g~~~~~l~~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~  400 (473)
                      +|+++..+.+++++++++. +++.|+|+   .+++.++|++||++|+   ||..|+||++++|||+||+|||+|+.++.+
T Consensus       232 i~g~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adv~v~---ps~~E~~~~~~~EAma~G~PvI~s~~~g~~  305 (370)
T d2iw1a1         232 VVGQDKPRKFEALAEKLGVRSNVHFFSG---RNDVSELMAAADLLLH---PAYQEAAGIVLLEAITAGLPVLTTAVCGYA  305 (370)
T ss_dssp             EESSSCCHHHHHHHHHHTCGGGEEEESC---CSCHHHHHHHCSEEEE---CCSCCSSCHHHHHHHHHTCCEEEETTSTTT
T ss_pred             cccccccccccccccccccccccccccc---cccccccccccccccc---ccccccccceeeecccCCeeEEEeCCCChH
Confidence            7777777889999999998 89999987   7899999999999999   688899999999999999999999999999


Q ss_pred             cceecCCceEEe-C--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Q 011979          401 ELVKVDKNGLLF-S--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI  464 (473)
Q Consensus       401 e~i~~~~~G~~~-~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~  464 (473)
                      |++.++.+|+++ +  |+++++++|.+++++    ++.+++|+++|+++++.++|. .|.+.+..++
T Consensus       306 e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d----~~~~~~~~~~ar~~~~~~~~~-~~~~~~~~ii  367 (370)
T d2iw1a1         306 HYIADANCGTVIAEPFSQEQLNEVLRKALTQ----SPLRMAWAENARHYADTQDLY-SLPEKAADII  367 (370)
T ss_dssp             HHHHHHTCEEEECSSCCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHSCCS-CHHHHHHHHH
T ss_pred             HHhcCCCceEEEcCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHhChh-HHHHHHHHHH
Confidence            999999999765 3  799999999999995    999999999999887555442 2444444443

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=9.4e-32  Score=280.97  Aligned_cols=295  Identities=13%  Similarity=0.068  Sum_probs=204.6

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhh------hhhcCCCchHH------HHHHHHHHHHhhcC
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLL------SLSLGRRSHFV------SIYRWIEKYYGKMA  167 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~------~~~~~~~~~~~------~~~~~~e~~~~~~a  167 (473)
                      .+||+||+|+....... .........++|+|++.|+..+...      .........+.      .-....++.....+
T Consensus       129 ~~pDIvH~h~~~~~l~~-~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  207 (477)
T d1rzua_         129 WRPDMVHAHDWQAAMTP-VYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTA  207 (477)
T ss_dssp             CCCSEEEEEHHHHTTHH-HHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHC
T ss_pred             CCCCEEEecchhHHHHH-HHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHHhh
Confidence            57999999983222222 1222334567999999998642110      00000000000      00002344555689


Q ss_pred             CEEEEcCHHHHHHHHH-Hh-----------CCceEEeeCC-CCCCcccCCh----------------hHHHHHHHhhhhh
Q 011979          168 NGCLCVTQAMQHELAQ-NW-----------GIKATVLYDQ-PPEFFHPTSL----------------EEKHELFCRLNKI  218 (473)
Q Consensus       168 d~vi~vS~~~~~~l~~-~~-----------g~~~~vi~n~-~~~~f~~~~~----------------~~~~~l~~~l~~~  218 (473)
                      |.++++|...++.+.. .+           ..++.+|+|+ +.+.|.|...                ..+..++.+.+  
T Consensus       208 d~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--  285 (477)
T d1rzua_         208 TALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFR--  285 (477)
T ss_dssp             SEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHT--
T ss_pred             hhhhhccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcc--
Confidence            9999999988765432 11           1237899998 4455655311                01122222221  


Q ss_pred             ccCCCCcccccCCCcCCCCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCch
Q 011979          219 LHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTN  298 (473)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~  298 (473)
                                                        ++++...+++|+||+.+.||++.|++|+..+.+             
T Consensus       286 ----------------------------------~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~-------------  318 (477)
T d1rzua_         286 ----------------------------------IDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS-------------  318 (477)
T ss_dssp             ----------------------------------CCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH-------------
T ss_pred             ----------------------------------cccCCccEEEEEeeeeecCCcHHHHHHHHHHHh-------------
Confidence                                              222233389999999999999999999999876             


Q ss_pred             hhHHHhhhccCccccCCCEEEEEEcCCCChHHH--HHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCC
Q 011979          299 EEVFLKEISDGKQYLYPRLLFIITGKGPDKESY--EEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLD  376 (473)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l--~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~  376 (473)
                                      .+.+++++|.|+.....  ++....++ .+|.+.+. .+.++...+++.||++|+   ||..|+
T Consensus       319 ----------------~~~~l~~~G~G~~~~~~~~~~~~~~~~-~~v~~~~~-~~~~~~~~~~~~aD~~v~---PS~~E~  377 (477)
T d1rzua_         319 ----------------LGGRLVVLGAGDVALEGALLAAASRHH-GRVGVAIG-YNEPLSHLMQAGCDAIII---PSRFEP  377 (477)
T ss_dssp             ----------------TTCEEEEEECBCHHHHHHHHHHHHHTT-TTEEEEES-CCHHHHHHHHHHCSEEEE---CCSCCS
T ss_pred             ----------------hCCeEEEEecCCchHHHHHHHHHhhcC-CeEEEEcc-cChhHHHHHHHhCccccC---CccccC
Confidence                            36788999988754333  33333333 78999988 788899999999999999   788899


Q ss_pred             CcHHHHHHHhcCCcEEEeccCccccceecCC---------ceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011979          377 LPMKVVDMFGCGLPVCAVSYSCIEELVKVDK---------NGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE  445 (473)
Q Consensus       377 ~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~---------~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~  445 (473)
                      ||++++||||||+|||+|+.||++|+|.++.         +|++++  |+++|+++|.++++.. +|++.+++|++++.+
T Consensus       378 fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~-~~~~~~~~~~~~a~~  456 (477)
T d1rzua_         378 CGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYY-HDPKLWTQMQKLGMK  456 (477)
T ss_dssp             SCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhh-CCHHHHHHHHHHHHH
Confidence            9999999999999999999999999998764         899996  7999999999887632 269999999999864


Q ss_pred             hccccchHHHHHHHHHHHHHHHhh
Q 011979          446 MGLSARWATEWEEHAKPLITEVIS  469 (473)
Q Consensus       446 ~~~~~~w~~~~~~~~~~~~~~~~~  469 (473)
                        ++|+|+...+++. ++|+++++
T Consensus       457 --~~fsw~~~a~~~~-~lY~~ll~  477 (477)
T d1rzua_         457 --SDVSWEKSAGLYA-ALYSQLIS  477 (477)
T ss_dssp             --CCCBHHHHHHHHH-HHHHHHTC
T ss_pred             --hhCCHHHHHHHHH-HHHHHHhC
Confidence              4799999988854 47777653

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=99.89  E-value=8.3e-23  Score=188.11  Aligned_cols=157  Identities=20%  Similarity=0.242  Sum_probs=128.6

Q ss_pred             EEEEEeecc-CCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh-HH-HHHHHH
Q 011979          260 LVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ES-YEEKIR  336 (473)
Q Consensus       260 ~i~~~G~~~-~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-~~-l~~~~~  336 (473)
                      .++|+||+. ++||++.+++|++.+.++                         ...++++|+|+|.|+.. +. .+...+
T Consensus        34 ~il~~Grl~~~~Kg~~~li~a~~~l~~~-------------------------~~~~~~~l~i~G~g~~~~~~~~~~~~~   88 (196)
T d2bfwa1          34 TFMFIGRFDRGQKGVDVLLKAIEILSSK-------------------------KEFQEMRFIIIGKGDPELEGWARSLEE   88 (196)
T ss_dssp             EEEEESCBCSSSSCHHHHHHHHHHHTTS-------------------------GGGGGEEEEEECCBCHHHHHHHHHHHH
T ss_pred             EEEEEcCCCccccCHHHHHHHHHhhhcc-------------------------cCCCCeEEEEEeecccchhhhhhhhhh
Confidence            799999997 589999999999988541                         02478999999998643 22 222333


Q ss_pred             HcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC--C
Q 011979          337 RLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--S  414 (473)
Q Consensus       337 ~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~--~  414 (473)
                      .  ..++.+++++++.+++..+|+.||++|+   ||..|++|.+++|||+||+|||+++.++..+++.+ .+|++++  |
T Consensus        89 ~--~~~~~~~~~~~~~~~l~~~~~~~di~v~---ps~~e~~~~~~~Eam~~G~pvI~~~~~~~~e~i~~-~~g~~~~~~~  162 (196)
T d2bfwa1          89 K--HGNVKVITEMLSREFVRELYGSVDFVII---PSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGD  162 (196)
T ss_dssp             H--CTTEEEECSCCCHHHHHHHHTTCSEEEE---CCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHCCT-TTCEEECTTC
T ss_pred             c--cceeEEeeeccccccchhcccccccccc---ccccccccccchhhhhcCceeeecCCCccceeecC-CceeeECCCC
Confidence            3  3355555555999999999999999999   67889999999999999999999999999998864 6899986  7


Q ss_pred             HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcccc
Q 011979          415 SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSA  450 (473)
Q Consensus       415 ~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~  450 (473)
                      +++++++|.++++.   +++.+++|+++|++.+.+|
T Consensus       163 ~~~l~~~i~~~l~~---~~~~~~~~~~~a~~~a~~f  195 (196)
T d2bfwa1         163 PGELANAILKALEL---SRSDLSKFRENCKKRAMSF  195 (196)
T ss_dssp             HHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHhC
Confidence            99999999999885   6889999999999876444

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: First mannosyl transferase WbaZ
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.88  E-value=1.2e-22  Score=182.25  Aligned_cols=148  Identities=22%  Similarity=0.257  Sum_probs=125.8

Q ss_pred             EEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCCh---HHHHHHHH
Q 011979          260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---ESYEEKIR  336 (473)
Q Consensus       260 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~---~~l~~~~~  336 (473)
                      .++|+||+.+.||++.+++|++.+                               ++.+++|+|.|+..   +.+.+.+.
T Consensus        14 ~~l~iGrl~~~K~~~~~i~a~~~l-------------------------------~~~~l~ivg~~~~~~~~~~~~~~~~   62 (166)
T d2f9fa1          14 FWLSVNRIYPEKRIELQLEVFKKL-------------------------------QDEKLYIVGWFSKGDHAERYARKIM   62 (166)
T ss_dssp             CEEEECCSSGGGTHHHHHHHHHHC-------------------------------TTSCEEEEBCCCTTSTHHHHHHHHH
T ss_pred             EEEEEecCccccCHHHHHHHHHHh-------------------------------cCCeEEEEEecccccchhhhhhhhc
Confidence            578999999999999999999875                               56788999987654   34444455


Q ss_pred             HcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCccccceecCCceEEeC-CH
Q 011979          337 RLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS-SS  415 (473)
Q Consensus       337 ~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~~~e~i~~~~~G~~~~-~~  415 (473)
                      +...++|+|+|. ++.+++..+|+.||++|+   ||..|++|++++|||+||+|||+++.++..|++.++.+|++++ |+
T Consensus        63 ~~~~~~v~~~g~-~~~~~~~~~~~~ad~~i~---ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~d~  138 (166)
T d2f9fa1          63 KIAPDNVKFLGS-VSEEELIDLYSRCKGLLC---TAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNADV  138 (166)
T ss_dssp             HHSCTTEEEEES-CCHHHHHHHHHHCSEEEE---CCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECSCH
T ss_pred             ccccCcEEEeec-cccccccccccccccccc---ccccccccccccccccccccceeecCCcceeeecCCcccccCCCCH
Confidence            554589999987 999999999999999999   7888999999999999999999999999999999999999986 79


Q ss_pred             HHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011979          416 SELADQLLMLFKGFPDDSDVLKKLRNGTLE  445 (473)
Q Consensus       416 ~~la~~i~~l~~~~~~~~~~~~~~~~~~~~  445 (473)
                      ++++++|.+++++   ....++.+.++|++
T Consensus       139 ~~~~~~i~~l~~~---~~~~~~~~~~~a~~  165 (166)
T d2f9fa1         139 NEIIDAMKKVSKN---PDKFKKDCFRRAKE  165 (166)
T ss_dssp             HHHHHHHHHHHHC---TTTTHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhC---HHHHHHHHHHHHhC
Confidence            9999999999996   22344556666654

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=4.5e-19  Score=184.12  Aligned_cols=286  Identities=8%  Similarity=-0.025  Sum_probs=189.7

Q ss_pred             CCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHHH
Q 011979          100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH  179 (473)
Q Consensus       100 ~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~  179 (473)
                      ..-|+|++|.+..++.  ...+-....+.++.+.+|..+....-+..   .+...   .+-. ....+|.+...+.....
T Consensus       121 ~~~d~iwvhDyhl~ll--p~~lR~~~~~~~i~~flH~pfP~~~~fr~---lp~~~---~il~-~ll~~d~igf~~~~~~~  191 (456)
T d1uqta_         121 QDDDIIWIHDYHLLPF--AHELRKRGVNNRIGFFLHIPFPTPEIFNA---LPTYD---TLLE-QLCDYDLLGFQTENDRL  191 (456)
T ss_dssp             CTTCEEEEESGGGTTH--HHHHHHTTCCSCEEEECCSCCCCHHHHTT---STTHH---HHHH-HHTTSSEEEESSHHHHH
T ss_pred             cCCCeEEEeccchhhh--HHHHHHhCCCCcEEEEeCCCCCChHHhcc---CcchH---HHHH-HhhccccccccCHHHHH
Confidence            4568999999644332  24444445678999999987421111111   11111   1111 12368999888887776


Q ss_pred             HHHHH----hCC---------------ceEEeeCCCC-CCcccC----ChhHHHHHHHhhhhhccCCCCcccccCCCcCC
Q 011979          180 ELAQN----WGI---------------KATVLYDQPP-EFFHPT----SLEEKHELFCRLNKILHQPLGVQDCVSNGMEG  235 (473)
Q Consensus       180 ~l~~~----~g~---------------~~~vi~n~~~-~~f~~~----~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  235 (473)
                      .+.+.    .+.               ++.++|+|.+ ..|.+.    ..+...+++..                     
T Consensus       192 ~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~~~l~~~---------------------  250 (456)
T d1uqta_         192 AFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAE---------------------  250 (456)
T ss_dssp             HHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHH---------------------
T ss_pred             HHHHHHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHHHHHHHHHHHh---------------------
Confidence            65432    111               1445555532 222211    11111122211                     


Q ss_pred             CCccchhhhcccccccccCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCC
Q 011979          236 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP  315 (473)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (473)
                                        ..+++ +++++||+.+.||++.+++|+..+.++                       .+-...
T Consensus       251 ------------------~~~~~-~il~V~Rld~~KGi~~~l~A~~~~l~~-----------------------~p~~~~  288 (456)
T d1uqta_         251 ------------------LKNVQ-NIFSVERLDYSKGLPERFLAYEALLEK-----------------------YPQHHG  288 (456)
T ss_dssp             ------------------TTTCE-EEEEECCBCGGGCHHHHHHHHHHHHHH-----------------------CGGGTT
T ss_pred             ------------------cCCCe-EEEEeCCCchhhchHHHHHHHHHHHHh-----------------------Cccccc
Confidence                              12333 999999999999999999999998763                       000123


Q ss_pred             CEEEEEEcCCCCh---------HHHHHHHHHc-------CC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCc
Q 011979          316 RLLFIITGKGPDK---------ESYEEKIRRL-------RL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLP  378 (473)
Q Consensus       316 ~~~l~ivG~g~~~---------~~l~~~~~~~-------~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p  378 (473)
                      ++.++.+|.+...         .++.+++.++       +. +.+.+.+. ++.+++..+|+.||++++   +|..|+||
T Consensus       289 ~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~-~~~~~l~a~~~~Adv~v~---~s~~EG~~  364 (456)
T d1uqta_         289 KIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQH-FDRKLLMKIFRYSDVGLV---TPLRDGMN  364 (456)
T ss_dssp             TEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSC-CCHHHHHHHHHHCSEEEE---CCSSBSCC
T ss_pred             cEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCC-cCHHHHhHHHhhhceeec---CCccCCCC
Confidence            5778888876432         1222333322       34 56888887 999999999999999999   89999999


Q ss_pred             HHHHHHHhcCCc-----EEEeccCccccceecCCceEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccc
Q 011979          379 MKVVDMFGCGLP-----VCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSAR  451 (473)
Q Consensus       379 ~kv~Eama~G~P-----vI~~~~~~~~e~i~~~~~G~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  451 (473)
                      ++++||||||+|     +|+|+.+|..+.+.   .|++++  |++++|++|.+++++   ++++++++.+++++.+.+++
T Consensus       365 lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~---~g~lVnP~d~~~~A~ai~~aL~~---~~~er~~~~~~~~~~v~~~~  438 (456)
T d1uqta_         365 LVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDEVAAALDRALTM---SLAERISRHAEMLDVIVKND  438 (456)
T ss_dssp             HHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTCHHHHHHHHHHHHTC---CHHHHHHHHHHHHHHHHHTC
T ss_pred             cHHHHHHHhCCCCCCCcEEEeCCCCCHHHhC---CeEEECcCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHCC
Confidence            999999999999     99999999999884   378886  899999999999987   67888899999999887776


Q ss_pred             hHHHHHHHHHHHHHHHh
Q 011979          452 WATEWEEHAKPLITEVI  468 (473)
Q Consensus       452 w~~~~~~~~~~~~~~~~  468 (473)
                      +. .|.+.+..-++++.
T Consensus       439 ~~-~W~~~fl~~l~~~~  454 (456)
T d1uqta_         439 IN-HWQECFISDLKQIV  454 (456)
T ss_dssp             HH-HHHHHHHHHHHHSC
T ss_pred             HH-HHHHHHHHHHHhhc
Confidence            54 46555444444443

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=99.34  E-value=1.1e-10  Score=113.43  Aligned_cols=115  Identities=16%  Similarity=0.198  Sum_probs=78.2

Q ss_pred             EEEEEEcCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc
Q 011979          317 LLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY  396 (473)
Q Consensus       317 ~~l~ivG~g~~~~~l~~~~~~~~l~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~  396 (473)
                      ...+.+|..................++...++   .+++.+++..||++|.    ..|   +..+.|++++|+|+|+.+.
T Consensus       207 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~f---~~~~~~lm~~adl~It----~~G---~~T~~Eal~~g~P~I~iP~  276 (351)
T d1f0ka_         207 VTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEF---IDDMAAAYAWADVVVC----RSG---ALTVSEIAAAGLPALFVPF  276 (351)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHTTCTTSEEESC---CSCHHHHHHHCSEEEE----CCC---HHHHHHHHHHTCCEEECCC
T ss_pred             ceeeeeccccchhhhhhhhcccccccceeeee---hhhHHHHHHhCchhhc----ccc---chHHHHHHHhCCceeeeec
Confidence            44455554443332232222322357888888   6889999999999997    333   3589999999999998753


Q ss_pred             C-------ccccceecCCceEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011979          397 S-------CIEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG  447 (473)
Q Consensus       397 ~-------~~~e~i~~~~~G~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~  447 (473)
                      .       ..++.+.+.+.|++.+    +.+.+.+.|..+      +++.+.+|++++++..
T Consensus       277 ~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l------~~~~~~~~~~~~~~~~  332 (351)
T d1f0ka_         277 QHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW------SRETLLTMAERARAAS  332 (351)
T ss_dssp             CCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC------CHHHHHHHHHHHHHTC
T ss_pred             ccCCchHHHHHHHHHHCCCEEEechhhCCHHHHHHHHHhh------CHHHHHHHHHHHHccC
Confidence            2       2345677777888875    355666665544      3678889999999865

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.01  E-value=9.5e-09  Score=100.42  Aligned_cols=107  Identities=14%  Similarity=0.104  Sum_probs=72.4

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc--------cccceecCCceEEe
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC--------IEELVKVDKNGLLF  412 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~--------~~e~i~~~~~G~~~  412 (473)
                      +||.+.+. +|+   ..++..+|++|.   .+ |   .+++.|||++|+|+|+....+        ..+.+.+.+.|+..
T Consensus       270 ~~v~i~~~-~p~---~~ll~~a~~~v~---hg-G---~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l  338 (391)
T d1pn3a_         270 ADCFVVGE-VNL---QELFGRVAAAIH---HD-S---AGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAV  338 (391)
T ss_dssp             TTCCEESS-CCH---HHHHTTSSCEEE---ES-C---HHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEE
T ss_pred             CCEEEecc-cCH---HHHHhhccEEEe---cC-c---hHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEc
Confidence            68999875 764   566889999997   22 2   358999999999999987433        35667777889887


Q ss_pred             C----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHh
Q 011979          413 S----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI  468 (473)
Q Consensus       413 ~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~  468 (473)
                      +    +.++|+++|.+++++     +    ++++++++++... +..-.+.++.+.+.+.
T Consensus       339 ~~~~~~~~~l~~~i~~~l~~-----~----~r~~a~~~a~~~~-~~g~~~aa~~i~~~l~  388 (391)
T d1pn3a_         339 DGPVPTIDSLSAALDTALAP-----E----IRARATTVADTIR-ADGTTVAAQLLFDAVS  388 (391)
T ss_dssp             CCSSCCHHHHHHHHHHHTST-----T----HHHHHHHHGGGSC-SCHHHHHHHHHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHHhCH-----H----HHHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence            4    489999999999863     2    3344554443332 2234444444444443

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=98.84  E-value=2.5e-07  Score=90.35  Aligned_cols=76  Identities=9%  Similarity=0.012  Sum_probs=60.2

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc----cccceecCCceEEeC---
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS---  413 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~----~~e~i~~~~~G~~~~---  413 (473)
                      +||.+.+. +|+   ..++..+|++|.   ..    -..++.||+++|+|+|+....+    ..+.+.+.+.|+..+   
T Consensus       286 ~~v~~~~~-~p~---~~ll~~~~~~I~---hg----G~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~  354 (401)
T d1rrva_         286 DDCFAIDE-VNF---QALFRRVAAVIH---HG----SAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPT  354 (401)
T ss_dssp             TTEEEESS-CCH---HHHGGGSSEEEE---CC----CHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSC
T ss_pred             CCEEEEec-cCc---HHHhhhccEEEe---cC----CchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEcCcCC
Confidence            68999975 775   556788999997   22    2459999999999999987544    556677778898885   


Q ss_pred             -CHHHHHHHHHHHHh
Q 011979          414 -SSSELADQLLMLFK  427 (473)
Q Consensus       414 -~~~~la~~i~~l~~  427 (473)
                       ++++|+++|.++++
T Consensus       355 ~~~~~L~~ai~~vl~  369 (401)
T d1rrva_         355 PTFESLSAALTTVLA  369 (401)
T ss_dssp             CCHHHHHHHHHHHTS
T ss_pred             CCHHHHHHHHHHHhC
Confidence             48999999999985

>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Thermus thermophilus [TaxId: 274]

Probab=98.84  E-value=1.5e-07  Score=93.56  Aligned_cols=274  Identities=15%  Similarity=0.073  Sum_probs=163.1

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      ..+||+|++++-. ..++ ++.+++...++|+++ +|.-..+.   ......+ --   .......+.|+..+|.++..+
T Consensus        86 ~~kPD~vlv~GDr-~e~l-a~a~aa~~~~ipi~H-iegG~rsg---~~~~~~~-de---~~R~~iskls~~hf~~t~~~~  155 (373)
T d1v4va_          86 EMGADYVLVHGDT-LTTF-AVAWAAFLEGIPVGH-VEAGLRSG---NLKEPFP-EE---ANRRLTDVLTDLDFAPTPLAK  155 (373)
T ss_dssp             HTTCSEEEEESSC-HHHH-HHHHHHHHTTCCEEE-ETCCCCCS---CTTSSTT-HH---HHHHHHHHHCSEEEESSHHHH
T ss_pred             hcCcccccccccC-ccch-hHHHHHHHhhhhhee-eccccccc---ccccCcc-hh---hhhhhhccccceeeecchhhh
Confidence            3789999998743 3344 467788888999665 44310000   0001111 11   222344568999999999999


Q ss_pred             HHHHHHhCCc-eEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCC
Q 011979          179 HELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR  257 (473)
Q Consensus       179 ~~l~~~~g~~-~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (473)
                      +.|.+ .|.+ -.+...|.+      ..+.-.. ...+...                                ....+..
T Consensus       156 ~~L~~-~Ge~~~~I~~vG~p------~~D~i~~-~~~~~~~--------------------------------~~~~~~~  195 (373)
T d1v4va_         156 ANLLK-EGKREEGILVTGQT------GVDAVLL-AAKLGRL--------------------------------PEGLPEG  195 (373)
T ss_dssp             HHHHT-TTCCGGGEEECCCH------HHHHHHH-HHHHCCC--------------------------------CTTCCSS
T ss_pred             hhhhh-hcccccceeecccc------hhhHHHh-hhhhccc--------------------------------ccccccc
Confidence            99987 4775 333333432      0111000 0111100                                0112234


Q ss_pred             CeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHHHH
Q 011979          258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR  337 (473)
Q Consensus       258 ~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~~  337 (473)
                      ++.++..-+-...++...+.+++..+.+.                           .+++.+++.... ....-+...+.
T Consensus       196 ~~~lvt~hr~~n~~~~~~~~~~~~~~~~~---------------------------~~~~~~i~p~~~-~~~~~~~~~~~  247 (373)
T d1v4va_         196 PYVTVTMHRRENWPLLSDLAQALKRVAEA---------------------------FPHLTFVYPVHL-NPVVREAVFPV  247 (373)
T ss_dssp             CEEEECCCCGGGGGGHHHHHHHHHHHHHH---------------------------CTTSEEEEECCS-CHHHHHHHHHH
T ss_pred             cceeEEeccccccchHHHHHHHHHHHhhh---------------------------cccceeeeeecc-cccchhhhhhh
Confidence            44666666666556677777777777662                           456666665432 22211222233


Q ss_pred             cCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEe-ccCccccceecCCceEEeCCH
Q 011979          338 LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKVDKNGLLFSSS  415 (473)
Q Consensus       338 ~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~-~~~~~~e~i~~~~~G~~~~~~  415 (473)
                      ... +++.++.. +++.++..+++.|++++-   .|++     -+.||.++|+|+|.. +.+.-.+-+..+.+-++..|.
T Consensus       248 ~~~~~n~~~~~~-l~~~~~l~ll~~s~~vig---nSss-----gi~Ea~~lg~P~Inir~~~eRqeg~~~g~nvlv~~d~  318 (373)
T d1v4va_         248 LKGVRNFVLLDP-LEYGSMAALMRASLLLVT---DSGG-----LQEEGAALGVPVVVLRNVTERPEGLKAGILKLAGTDP  318 (373)
T ss_dssp             HTTCTTEEEECC-CCHHHHHHHHHTEEEEEE---SCHH-----HHHHHHHTTCCEEECSSSCSCHHHHHHTSEEECCSCH
T ss_pred             hcccccceeecc-chHHHHHHHhhhceeEec---ccch-----hhhcchhhcCcEEEeCCCccCHHHHhcCeeEEcCCCH
Confidence            333 79999998 999999999999999986   4443     678999999999998 456666666655553333489


Q ss_pred             HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Q 011979          416 SELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV  467 (473)
Q Consensus       416 ~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~  467 (473)
                      +++.+++..++++    ++.++++.+.    ..-|--.++-+++++.|.+.+
T Consensus       319 ~~I~~~i~~~l~~----~~~~~~~~~~----~npYGdG~as~rI~~~L~~~~  362 (373)
T d1v4va_         319 EGVYRVVKGLLEN----PEELSRMRKA----KNPYGDGKAGLMVARGVAWRL  362 (373)
T ss_dssp             HHHHHHHHHHHTC----HHHHHHHHHS----CCSSCCSCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHcC----HHHHhhcccC----CCCCCCCHHHHHHHHHHHHHh
Confidence            9999999999885    6665554432    112322345566666665433

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=98.66  E-value=2.7e-07  Score=89.65  Aligned_cols=76  Identities=12%  Similarity=0.030  Sum_probs=59.7

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccCc----cccceecCCceEEeC---
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS---  413 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~~----~~e~i~~~~~G~~~~---  413 (473)
                      +||.+.+. +|+   ..+|..+|++|.     ++  -..++.|++++|+|+|+....+    ..+.+.+.+.|+..+   
T Consensus       285 ~nv~~~~~-~p~---~~~l~~~~~~V~-----hg--G~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~  353 (401)
T d1iira_         285 ADCFAIGE-VNH---QVLFGRVAAVIH-----HG--GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPI  353 (401)
T ss_dssp             GGEEECSS-CCH---HHHGGGSSEEEE-----CC--CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSS
T ss_pred             CCEEEEec-cCH---HHHHhhcCEEEe-----cC--CchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcCcCC
Confidence            68999875 764   567889999996     22  3569999999999999976433    455666777888874   


Q ss_pred             -CHHHHHHHHHHHHh
Q 011979          414 -SSSELADQLLMLFK  427 (473)
Q Consensus       414 -~~~~la~~i~~l~~  427 (473)
                       ++++++++|.++++
T Consensus       354 ~~~~~l~~ai~~~l~  368 (401)
T d1iira_         354 PTFDSLSAALATALT  368 (401)
T ss_dssp             CCHHHHHHHHHHHTS
T ss_pred             CCHHHHHHHHHHHhC
Confidence             59999999999986

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]

Probab=98.61  E-value=9.2e-06  Score=80.44  Aligned_cols=251  Identities=14%  Similarity=0.080  Sum_probs=135.0

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      ..+||+|++++-. ..++ ++.+++...++|+++ +|.-.-     +.....+.  .-........+.||..+|.++..+
T Consensus        86 ~~kpD~v~v~GDr-~e~l-a~a~aa~~~~Ipi~H-iegG~~-----s~~~~~~~--~de~~R~~iskls~~hf~~t~~~~  155 (377)
T d1o6ca_          86 DIKPDIVLVHGDT-TTTF-AGSLAAFYHQIAVGH-VEAGLR-----TGNKYSPF--PEELNRQMTGAIADLHFAPTGQAK  155 (377)
T ss_dssp             HHCCSEEEEETTC-HHHH-HHHHHHHHTTCEEEE-ESCCCC-----CSCTTTTT--THHHHHHHHHHHCSEEEESSHHHH
T ss_pred             hcccceeEeeecc-cccc-hhhhhhhhccceEEE-Eecccc-----cccccccC--chhhhccccccceeEEeecchhhh
Confidence            3789999998743 3333 577888889999754 443210     00000000  011223345568999999999999


Q ss_pred             HHHHHHhCCc-eEEeeCCCCCCcccCChhHHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhcccccccccCCCC
Q 011979          179 HELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR  257 (473)
Q Consensus       179 ~~l~~~~g~~-~~vi~n~~~~~f~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (473)
                      +.|.+ .|.+ -.+...|.+      ..   ..+........                   ....+        ......
T Consensus       156 ~~L~~-~G~~~~~I~~vG~~------~~---D~i~~~~~~~~-------------------~~~~~--------~~~~~~  198 (377)
T d1o6ca_         156 DNLLK-ENKKADSIFVTGNT------AI---DALNTTVRDGY-------------------SHPVL--------DQVGED  198 (377)
T ss_dssp             HHHHH-TTCCGGGEEECCCH------HH---HHHHHHCCSSC-------------------CCSTT--------TTTTTS
T ss_pred             hhhhh-hccccceEeeccch------hH---HHHHHHHHHHH-------------------hhhhh--------hhccCC
Confidence            99988 4766 344444432      00   01111000000                   00000        111123


Q ss_pred             CeEEEEEeeccCC-CCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHHHHHH
Q 011979          258 PALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR  336 (473)
Q Consensus       258 ~~~i~~~G~~~~~-K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~~~~~  336 (473)
                      +.+++..-+.... +.....+.++.....                           ..++..+++......  .......
T Consensus       199 ~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~i~~~~~~~--~~~~~~~  249 (377)
T d1o6ca_         199 KMILLTAHRRENLGEPMENMFKAIRRIVG---------------------------EFEDVQVVYPVHLNP--VVREAAH  249 (377)
T ss_dssp             EEEEECC----------HHHHHHHHHHHH---------------------------HCTTEEEEEC----C--HHHHHHH
T ss_pred             ceEEEEeccccccccchHHHHHHHHhhcc---------------------------ccccccccccccccc--ccchhhh
Confidence            3344444443332 222333344433333                           135566655543222  2333333


Q ss_pred             H-cCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc-CccccceecCCceEEeC
Q 011979          337 R-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCIEELVKVDKNGLLFS  413 (473)
Q Consensus       337 ~-~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~-~~~~e~i~~~~~G~~~~  413 (473)
                      + +.. ++|.+... +++.++..+++.|++++-   .|++     -+.||-.+|+|+|.... +.-.+-+..+.+ ++++
T Consensus       250 ~~~~~~~ni~~~~~-l~~~~fl~llk~s~~vIg---nSss-----~i~Ea~~lg~P~Inir~~tERqe~~~~g~n-ilv~  319 (377)
T d1o6ca_         250 KHFGDSDRVHLIEP-LEVIDFHNFAAKSHFILT---DSGG-----VQEEAPSLGKPVLVLRDTTERPEGVEAGTL-KLAG  319 (377)
T ss_dssp             HC--CCSSEEECCC-CCHHHHHHHHHHCSEEEE---C--C-----HHHHGGGGTCCEEEECSCCC---CTTTTSS-EEEC
T ss_pred             hccccccceEeccc-cchHHHHHHHhhhheeec---ccch-----hHHhhhhhhceEEEeCCCCcCcchhhcCee-EECC
Confidence            3 333 79999988 999999999999999886   5555     67899999999999843 445565655544 4454


Q ss_pred             -CHHHHHHHHHHHHhCCCCCHHHHHHH
Q 011979          414 -SSSELADQLLMLFKGFPDDSDVLKKL  439 (473)
Q Consensus       414 -~~~~la~~i~~l~~~~~~~~~~~~~~  439 (473)
                       |.+++.+++.+++++    +...+.+
T Consensus       320 ~~~~~I~~~i~~~l~~----~~~~~~~  342 (377)
T d1o6ca_         320 TDEENIYQLAKQLLTD----PDEYKKM  342 (377)
T ss_dssp             SCHHHHHHHHHHHHHC----HHHHHHH
T ss_pred             CCHHHHHHHHHHHHhC----hHHHhhh
Confidence             899999999999885    5554443

>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.41  E-value=1.8e-05  Score=78.30  Aligned_cols=250  Identities=16%  Similarity=0.085  Sum_probs=142.7

Q ss_pred             hCCCCEEEEeCCCchhHHHHHHHHHhhCCCeEEEEecCchhhhhhhhcCCCchHHHHHHHHHHHHhhcCCEEEEcCHHHH
Q 011979           99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ  178 (473)
Q Consensus        99 ~~~~Dvi~~~~p~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~  178 (473)
                      ..+||+|++++-. ..++ ++.+++...++|+++ +|.-.-+.   ......+-    ........+.||..+|.++..+
T Consensus        84 ~~kPD~v~v~GDr-~e~l-a~a~aa~~~~ipi~H-iegG~~s~---~~~~~~pd----e~~R~~iskls~~hf~~~~~~~  153 (376)
T d1f6da_          84 EFKPDVVLVHGDT-TTTL-ATSLAAFYQRIPVGH-VEAGLRTG---DLYSPWPE----EANRTLTGHLAMYHFSPTETSR  153 (376)
T ss_dssp             HHCCSEEEEETTC-HHHH-HHHHHHHTTTCCEEE-ESCCCCCS---CTTSSTTH----HHHHHHHHHTCSEEEESSHHHH
T ss_pred             hccCcceeeeccc-cchh-hHHHHHHhhCceEEE-Eecccccc---cccccCch----hhhhhhhccceeEEEeccHHHH
Confidence            3789999998743 3444 577788889999654 45421000   00001111    1223345578999999999999


Q ss_pred             HHHHHHhCCc-eEEeeCCCC--CCcccCChh--HHHHHHHhhhhhccCCCCcccccCCCcCCCCccchhhhccccccccc
Q 011979          179 HELAQNWGIK-ATVLYDQPP--EFFHPTSLE--EKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL  253 (473)
Q Consensus       179 ~~l~~~~g~~-~~vi~n~~~--~~f~~~~~~--~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (473)
                      +.|.+ .|.+ -.+...|.+  +.+......  ....+.......                               -...
T Consensus       154 ~~L~~-~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~  201 (376)
T d1f6da_         154 QNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAAN-------------------------------YPFI  201 (376)
T ss_dssp             HHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTT-------------------------------CTTC
T ss_pred             hHHHh-cCCCccccceecCchHHHHHHHHhhhhccchhhhhhhcc-------------------------------cccc
Confidence            99988 4776 334444432  111000000  000000000000                               0012


Q ss_pred             CCCCCeEEEEEeecc-CCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHHHH
Q 011979          254 KPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE  332 (473)
Q Consensus       254 ~~~~~~~i~~~G~~~-~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~l~  332 (473)
                      ..+.+++++..=+.. ..+....++.++..+.+.                           ..++.+++.-... ...-+
T Consensus       202 ~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~---------------------------~~~~~ii~p~~~~-~~~~~  253 (376)
T d1f6da_         202 DPDKKMILVTGHRRESFGRGFEEICHALADIATT---------------------------HQDIQIVYPVHLN-PNVRE  253 (376)
T ss_dssp             CTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCBC-HHHHH
T ss_pred             CCCCceEEEecccchhhhhhHHHHHHHHhhhhhh---------------------------cceeEEecccccc-hhhhh
Confidence            233443444333322 233456666777666552                           4566766665322 22122


Q ss_pred             HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec-cCccccceecCCceE
Q 011979          333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNGL  410 (473)
Q Consensus       333 ~~~~~~~l-~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~-~~~~~e~i~~~~~G~  410 (473)
                      ...+.+.. +++.+... +++.++..+++.|++.+-   .|++     -+.||-.+|+|+|.-. ...-.+-+..+ +-+
T Consensus       254 ~~~~~~~~~~ni~~~~~-l~~~~fl~ll~~a~~vig---nSss-----gi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i  323 (376)
T d1f6da_         254 PVNRILGHVKNVILIDP-QEYLPFVWLMNHAWLILT---DSGG-----IQEEAPSLGKPVLVMRDTTERPEAVTAG-TVR  323 (376)
T ss_dssp             HHHHHHTTCTTEEEECC-CCHHHHHHHHHHCSEEEE---SSSG-----GGGTGGGGTCCEEECSSCCSCHHHHHHT-SEE
T ss_pred             hHhhhhcccccceeecc-ccHHHHHHHHhhceEEEe---cCcc-----hHhhHHHhCCCEEEcCCCccCccceecC-eeE
Confidence            22233333 79999998 999999999999999997   5544     5679999999999763 23344555444 444


Q ss_pred             EeC-CHHHHHHHHHHHHhC
Q 011979          411 LFS-SSSELADQLLMLFKG  428 (473)
Q Consensus       411 ~~~-~~~~la~~i~~l~~~  428 (473)
                      +++ |.+++.+++.+++++
T Consensus       324 ~v~~~~~~I~~ai~~~l~~  342 (376)
T d1f6da_         324 LVGTDKQRIVEEVTRLLKD  342 (376)
T ss_dssp             ECCSSHHHHHHHHHHHHHC
T ss_pred             ECCCCHHHHHHHHHHHHhC
Confidence            554 799999999999885

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Triterpene UDP-glucosyl transferase UGT71G1
species: Medicago truncatula [TaxId: 3880]

Probab=98.37  E-value=0.00028  Score=69.14  Aligned_cols=116  Identities=12%  Similarity=0.048  Sum_probs=70.0

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----Cccccc-eecCCceEEeC--
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEEL-VKVDKNGLLFS--  413 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~-i~~~~~G~~~~--  413 (473)
                      .|+.+.. |.++.++. .+..+|++|.    ..|   -..+.||+.+|+|+|+...    .....- ++..+.|+..+  
T Consensus       330 ~n~~v~~-~~pq~~~l-~~p~~~~fIt----HGG---~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~  400 (461)
T d2acva1         330 GKGMICG-WAPQVEVL-AHKAIGGFVS----HCG---WNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVD  400 (461)
T ss_dssp             CSEEEES-SCCHHHHH-HSTTEEEEEE----CCC---HHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSS
T ss_pred             CCeEEEe-cCCHHHHH-hcccCCEEEe----cCC---ccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeecc
Confidence            4677764 46665544 4678889886    222   2499999999999999863    233344 45567787763  


Q ss_pred             --------CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHh
Q 011979          414 --------SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI  468 (473)
Q Consensus       414 --------~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~  468 (473)
                              +.+++++++.+++++-....+..+++++.+++..++-   -+-...+.+++++++
T Consensus       401 ~~~~~~~~t~~~l~~a~~~vl~~d~~~r~~a~~l~~~~r~a~~~g---g~s~~~~~~~~~~~~  460 (461)
T d2acva1         401 YRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDG---GSSLISVGKLIDDIT  460 (461)
T ss_dssp             CCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTT---SHHHHHHHHHHHHHH
T ss_pred             ccccCCccCHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhcCC---CchHHHHHHHHHHhc
Confidence                    4789999999999641111223334444444322110   011233677777775

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

Probab=98.16  E-value=5.6e-05  Score=74.54  Aligned_cols=92  Identities=15%  Similarity=0.137  Sum_probs=62.8

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEeccC----cccccee-cCCceEEeC--
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVK-VDKNGLLFS--  413 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~~----~~~e~i~-~~~~G~~~~--  413 (473)
                      +|+.+.. |+|+.++.. ...++++|.    .-|   ...+.||+.+|+|+|+....    .....+. ..+.|+..+  
T Consensus       319 ~nv~~~~-~~pq~~lL~-hp~~~~fIt----HGG---~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~  389 (450)
T d2c1xa1         319 GYGMVVP-WAPQAEVLA-HEAVGAFVT----HCG---WNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGG  389 (450)
T ss_dssp             TTEEEES-CCCHHHHHT-STTEEEEEE----CCC---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGG
T ss_pred             ccccccc-cCChHhhhc-cCceeEEEc----cCC---ccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCC
Confidence            4788874 477765332 255677775    222   34899999999999999743    2334454 458898875  


Q ss_pred             --CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 011979          414 --SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM  446 (473)
Q Consensus       414 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~  446 (473)
                        +.+++.++|.+++++    + .++++++++.+.
T Consensus       390 ~~t~~~l~~ai~~vL~d----~-~y~~~~~r~~~l  419 (450)
T d2c1xa1         390 VFTKSGLMSCFDQILSQ----E-KGKKLRENLRAL  419 (450)
T ss_dssp             SCCHHHHHHHHHHHHHS----H-HHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHhcC----c-HHHHHHHHHHHH
Confidence              589999999999996    3 344555555543

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]

Probab=97.72  E-value=0.0026  Score=61.99  Aligned_cols=111  Identities=15%  Similarity=0.196  Sum_probs=73.9

Q ss_pred             CcEEEecCCCCcccHHHHH--hcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc----Cccccce-ecCCceEEeC
Q 011979          341 KRVAFRTMWLSAEDYPLLL--GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELV-KVDKNGLLFS  413 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l--~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~----~~~~e~i-~~~~~G~~~~  413 (473)
                      +||.+.. |+|+.++   |  .+++++|.     +|-  ...+.||+.+|+|+|+...    .....-+ +..+.|+..+
T Consensus       346 ~Nv~~~~-~~Pq~~l---L~hp~~~~fIt-----HGG--~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~  414 (473)
T d2pq6a1         346 DRGLIAS-WCPQDKV---LNHPSIGGFLT-----HCG--WNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID  414 (473)
T ss_dssp             TTEEEES-CCCHHHH---HTSTTEEEEEE-----CCC--HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC
T ss_pred             CceEEee-eCCHHHH---hcCCcCcEEEe-----cCC--ccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeC
Confidence            5898885 5887664   6  45666775     221  2489999999999999963    2333434 4447888876


Q ss_pred             ---CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccc--hH---HHHHHHHHHHHHHHh
Q 011979          414 ---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSAR--WA---TEWEEHAKPLITEVI  468 (473)
Q Consensus       414 ---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--w~---~~~~~~~~~~~~~~~  468 (473)
                         +.++++++|.+++++    +. .+++++||.+.++...  ++   .++ ..++.++++++
T Consensus       415 ~~~t~~~l~~ai~~vl~d----~~-~~~~r~~a~~l~~~~~~a~~~gg~s~-~~~~~~i~~~~  471 (473)
T d2pq6a1         415 TNVKREELAKLINEVIAG----DK-GKKMKQKAMELKKKAEENTRPGGCSY-MNLNKVIKDVL  471 (473)
T ss_dssp             SSCCHHHHHHHHHHHHTS----HH-HHHHHHHHHHHHHHHHHHTSTTCHHH-HHHHHHHHHTT
T ss_pred             CCcCHHHHHHHHHHHHcC----Ch-HHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHh
Confidence               699999999999996    43 4567777777663321  11   122 23566776664

>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: ADP-heptose LPS heptosyltransferase II
domain: ADP-heptose LPS heptosyltransferase II
species: Escherichia coli [TaxId: 562]

Probab=97.26  E-value=0.0016  Score=61.85  Aligned_cols=104  Identities=15%  Similarity=0.145  Sum_probs=68.8

Q ss_pred             CCCCCeEEEEEe-eccCCCC--HHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCCCChHH
Q 011979          254 KPNRPALVVSST-SWTPDED--FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES  330 (473)
Q Consensus       254 ~~~~~~~i~~~G-~~~~~K~--~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~  330 (473)
                      ..+++.+++..| +..+.|.  .+..++.++.+.+                             .+..++++|.+.+.+.
T Consensus       177 ~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~-----------------------------~~~~ivl~g~~~e~~~  227 (348)
T d1pswa_         177 SSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID-----------------------------EGYQVVLFGSAKDHEA  227 (348)
T ss_dssp             CSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH-----------------------------TTCEEEECCCGGGHHH
T ss_pred             ccCCCeEEeccccchhhccccchHHHhhhHHHHhh-----------------------------cCCccccccccchHHH
Confidence            344565666665 4444454  4557777777765                             3567888886555554


Q ss_pred             HHHHHHHcCC---Cc-EEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEec
Q 011979          331 YEEKIRRLRL---KR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS  395 (473)
Q Consensus       331 l~~~~~~~~l---~~-V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~  395 (473)
                      .++..+....   .+ +.+.|. .+-.++..+++.||++|.   .+++     .+=-|.|+|+|+|+--
T Consensus       228 ~~~~~~~~~~~~~~~~~~l~g~-~sl~el~~li~~a~l~I~---~Dtg-----~~HlAaa~g~p~i~lf  287 (348)
T d1pswa_         228 GNEILAALNTEQQAWCRNLAGE-TQLDQAVILIAACKAIVT---NDSG-----LMHVAAALNRPLVALY  287 (348)
T ss_dssp             HHHHHTTSCHHHHTTEEECTTT-SCHHHHHHHHHTSSEEEE---ESSH-----HHHHHHHTTCCEEEEE
T ss_pred             HHHHHHhhhcccccccccccCC-ccHHHHHHHHhcceeEee---cCcc-----HHHHHHHcCCCEEEEE
Confidence            4444333321   23 445565 788999999999999998   4555     5677999999999973

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Hydroquinone glucosyltransferase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.15  E-value=0.12  Score=49.51  Aligned_cols=91  Identities=16%  Similarity=0.102  Sum_probs=60.0

Q ss_pred             CcEEEecCCCCcccHHHHHhcCcEEEEeccCCCCCCCcHHHHHHHhcCCcEEEecc-C---ccccce-ecCCceEEeC--
Q 011979          341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-S---CIEELV-KVDKNGLLFS--  413 (473)
Q Consensus       341 ~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s~~e~~p~kv~Eama~G~PvI~~~~-~---~~~e~i-~~~~~G~~~~--  413 (473)
                      +||.+.+ |+|+.++... .+++++|.     ++-  ...+.||+.+|+|+|+... +   .....+ +.-+.|+...  
T Consensus       334 ~nv~~~~-w~Pq~~lL~h-p~~~~fVt-----HGG--~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~  404 (471)
T d2vcha1         334 RGFVIPF-WAPQAQVLAH-PSTGGFLT-----HCG--WNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAG  404 (471)
T ss_dssp             TEEEEES-CCCHHHHHHS-TTEEEEEE-----CCC--HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCC
T ss_pred             CCeeecc-cCCHHHHhcC-ccCCEEEe-----cCC--ccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecC
Confidence            6888885 5988764331 45677775     221  2489999999999999863 2   233333 3346777552  


Q ss_pred             -----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011979          414 -----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE  445 (473)
Q Consensus       414 -----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~  445 (473)
                           +.++++++|.+++++    ++ .+.+++||.+
T Consensus       405 ~~~~~t~~~l~~ai~~vl~~----~~-~~~~r~ra~~  436 (471)
T d2vcha1         405 DDGLVRREEVARVVKGLMEG----EE-GKGVRNKMKE  436 (471)
T ss_dssp             TTSCCCHHHHHHHHHHHHTS----TH-HHHHHHHHHH
T ss_pred             CCCcCCHHHHHHHHHHHhCC----cH-HHHHHHHHHH
Confidence                 579999999999986    32 2345555544

>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Glycogen phosphorylase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=95.77  E-value=0.31  Score=51.36  Aligned_cols=137  Identities=15%  Similarity=0.080  Sum_probs=94.2

Q ss_pred             cCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCC-CCh---
Q 011979          253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDK---  328 (473)
Q Consensus       253 ~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g-~~~---  328 (473)
                      +.++. ..++++=|+.+.|...+.+.-+-.+.++++.+.+..                   .....+++.|+- |.-   
T Consensus       546 ldp~~-lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~-------------------~~P~q~IFaGKAhP~d~~g  605 (824)
T d2gj4a1         546 INPNS-LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKF-------------------VVPRTVMIGGKAAPGYHMA  605 (824)
T ss_dssp             CCTTS-EEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSC-------------------CCCEEEEEECCCCTTCHHH
T ss_pred             CCcch-hhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCC-------------------CCCeEEEEeCCCCCccHHH
Confidence            34444 378999999999999885544433333333332221                   235899999975 322   


Q ss_pred             HHHHHHHHHc----C----C---CcEEEecCCCCcccHHHHHhcCcEEEEeccCC--CCCCCcHHHHHHHhcCCcEEEec
Q 011979          329 ESYEEKIRRL----R----L---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS--SGLDLPMKVVDMFGCGLPVCAVS  395 (473)
Q Consensus       329 ~~l~~~~~~~----~----l---~~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s--~~e~~p~kv~Eama~G~PvI~~~  395 (473)
                      +.+-+++..+    +    +   -+|.|+.- ...+-...++..||+-..   .|  ..|..|+.=+=+|..|.+.+++-
T Consensus       606 K~iIk~I~~va~~in~dp~~~~~lkVvFlen-Y~v~lA~~li~g~Dvwln---~p~~~~EASGTSgMK~alNGal~lstl  681 (824)
T d2gj4a1         606 KMIIKLITAIGDVVNHDPVVGDRLRVIFLEN-YRVSLAEKVIPAADLSEQ---ISTAGTEASGTGNMKFMLNGALTIGTM  681 (824)
T ss_dssp             HHHHHHHHHHHHHHTTCTTTGGGEEEEEETT-CCHHHHHHHGGGCSEEEE---CCCTTSCSCCSHHHHHHHTTCEEEECS
T ss_pred             HHHHHHHHHHHHHHhcChhhccceeEEEcCC-CchHHHHHhhhhhhhhhc---CCCCCcccCCcchhHHHHcCCeeeccc
Confidence            2222222211    1    1   16889976 778888899999999999   44  45888889999999999999998


Q ss_pred             cCccccceec--CCceEEeC
Q 011979          396 YSCIEELVKV--DKNGLLFS  413 (473)
Q Consensus       396 ~~~~~e~i~~--~~~G~~~~  413 (473)
                      .|...|+.++  +.|||++.
T Consensus       682 DGwnvEi~~~vg~~N~~~fG  701 (824)
T d2gj4a1         682 DGANVEMAEEAGEENFFIFG  701 (824)
T ss_dssp             CTTHHHHHHHHCGGGSEECS
T ss_pred             cchHHHHHHhcCcccEEEeC
Confidence            8888787664  67899996

>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Maltodextrin phosphorylase (MALP)
species: Escherichia coli [TaxId: 562]

Probab=95.53  E-value=0.22  Score=52.45  Aligned_cols=137  Identities=13%  Similarity=0.105  Sum_probs=95.9

Q ss_pred             cCCCCCeEEEEEeeccCCCCHHHHHHHHHHhHHHHHhhhccCCCchhhHHHhhhccCccccCCCEEEEEEcCC-CCh---
Q 011979          253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDK---  328 (473)
Q Consensus       253 ~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g-~~~---  328 (473)
                      +.++. ..++++=|+...|...+++.-...+.+++                   .+........+.+++.|+- |.-   
T Consensus       522 ldp~~-LtigfaRRfa~YKR~~L~~~~i~~l~~~l-------------------~~~~~~~~~Pvq~IfaGKAhP~d~~g  581 (796)
T d1l5wa_         522 INPQA-IFDIQIKRLHEYKRQHLNLLHILALYKEI-------------------RENPQADRVPRVFLFGAKAAPGYYLA  581 (796)
T ss_dssp             CCTTS-EEEEEESCCCGGGTHHHHHHHHHHHHHHH-------------------HTCTTCCCCCEEEEEECCCCTTCHHH
T ss_pred             cChhh-ccchhhhhhhhhhcccchhhhHHHHHHHH-------------------hcCcccCCCceEEEEcCCCCCchHHH
Confidence            44444 38899999999999998766655554432                   1111111234889999975 322   


Q ss_pred             HHHHHHHHHc--------CCC---cEEEecCCCCcccHHHHHhcCcEEEEeccCC--CCCCCcHHHHHHHhcCCcEEEec
Q 011979          329 ESYEEKIRRL--------RLK---RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS--SGLDLPMKVVDMFGCGLPVCAVS  395 (473)
Q Consensus       329 ~~l~~~~~~~--------~l~---~V~~~g~~v~~~~i~~~l~~adi~v~~~~~s--~~e~~p~kv~Eama~G~PvI~~~  395 (473)
                      .++-+.+...        .+.   +|.|+.- .+-+-...++..+|+-+.   .+  ..|..|+.=+=||..|.+.+++-
T Consensus       582 K~iIk~I~~va~~in~dp~~~~~~kVVFlen-Ydv~lA~~lv~g~DVwln---~p~~p~EASGTSgMKaalNG~lnlstl  657 (796)
T d1l5wa_         582 KNIIFAINKVADVINNDPLVGDKLKVVFLPD-YCVSAAEKLIPAADISEQ---ISTAGKEASGTGNMKLALNGALTVGTL  657 (796)
T ss_dssp             HHHHHHHHHHHHHHHTCTTTGGGEEEEECSS-CCHHHHHHHGGGCSEEEE---CCCTTTCCCCSHHHHHHHTTCEEEECS
T ss_pred             HHHHHHHHHHHHHhcCChhhccceeEEEeCC-CchHHHHHHhcccchhhh---CCCCCcccCCchHHHHHHcCCeeeecc
Confidence            2222222211        111   6899876 777788889999999999   33  55889999999999999999998


Q ss_pred             cCccccceec--CCceEEeC
Q 011979          396 YSCIEELVKV--DKNGLLFS  413 (473)
Q Consensus       396 ~~~~~e~i~~--~~~G~~~~  413 (473)
                      .|...|..++  +.|||++.
T Consensus       658 DGw~vE~~~~vg~eN~f~fG  677 (796)
T d1l5wa_         658 DGANVEIAEKVGEENIFIFG  677 (796)
T ss_dssp             CTTHHHHHHHHCGGGSEECS
T ss_pred             cchHHHHHHhcCccceEEec
Confidence            8888887764  78999996

>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Pyruvate oxidase
species: Aerococcus viridans [TaxId: 1377]

Probab=86.75  E-value=6.2  Score=32.69  Aligned_cols=107  Identities=13%  Similarity=0.058  Sum_probs=60.3

Q ss_pred             EEEEEEcCCC--ChHHHHHHHHHcCCCcEE--------------EecCC--CCcccHHHHHhcCcEEEEeccCCCCCCCc
Q 011979          317 LLFIITGKGP--DKESYEEKIRRLRLKRVA--------------FRTMW--LSAEDYPLLLGSADLGVCLHTSSSGLDLP  378 (473)
Q Consensus       317 ~~l~ivG~g~--~~~~l~~~~~~~~l~~V~--------------~~g~~--v~~~~i~~~l~~adi~v~~~~~s~~e~~p  378 (473)
                      --++|+|.|.  ..+++.++++.++++-+.              +.|..  ........++.+||++++.-  +.. ++.
T Consensus        23 ~Pvii~G~g~~~a~~~l~~lae~l~~Pv~~t~~~~g~ip~~hp~~~G~~g~~~~~~~~~~l~~aDlvi~lG--~~~-~~~   99 (177)
T d2djia1          23 RPVIYAGIGTMGHGPAVQELARKIKAPVITTGKNFETFEWDFEALTGSTYRVGWKPANETILEADTVLFAG--SNF-PFS   99 (177)
T ss_dssp             SEEEEECGGGTTCHHHHHHHHHHHTCCEEECTTCGGGSCTTCTTBCCCSSSSSCHHHHHHHHHCSEEEEES--CCC-TTT
T ss_pred             CEEEEECcChhhHHHHHHHhhhccceEEEecccccccccccccccccccccccChhhhhhhhccCceEEee--ccC-CCc
Confidence            4578889873  346799999999875332              22210  22345668899999999952  111 110


Q ss_pred             HHHHHHHhcCCcEEEeccCccccceecCCc-eEEeCCHHHHHHHHHHHHhC
Q 011979          379 MKVVDMFGCGLPVCAVSYSCIEELVKVDKN-GLLFSSSSELADQLLMLFKG  428 (473)
Q Consensus       379 ~kv~Eama~G~PvI~~~~~~~~e~i~~~~~-G~~~~~~~~la~~i~~l~~~  428 (473)
                       .....+.-..++|..+... .++-..... --+..|+....++|...++.
T Consensus       100 -~~~~~~~~~~kiI~Id~d~-~~i~~~~~~d~~i~gD~~~~L~~L~~~l~~  148 (177)
T d2djia1         100 -EVEGTFRNVDNFIQIDIDP-AMLGKRHHADVAILGDAALAIDEILNKVDA  148 (177)
T ss_dssp             -TTTTTTTTCSEEEEEESCG-GGTTSSSCCSEEEESCHHHHHHHHHHHSCC
T ss_pred             -cceeccccccchheEEecc-cccCCcccCceEEEeCHHHHHHHHHHhhhh
Confidence             0112345566787766432 222111111 12446777777877777764

>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Pyruvate oxidase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=82.10  E-value=13  Score=30.97  Aligned_cols=106  Identities=12%  Similarity=0.118  Sum_probs=60.6

Q ss_pred             EEEEEEcCCCC--hHHHHHHHHHcCCCcEE--------------EecCC--CCcccHHHHHhcCcEEEEeccCCCCCCCc
Q 011979          317 LLFIITGKGPD--KESYEEKIRRLRLKRVA--------------FRTMW--LSAEDYPLLLGSADLGVCLHTSSSGLDLP  378 (473)
Q Consensus       317 ~~l~ivG~g~~--~~~l~~~~~~~~l~~V~--------------~~g~~--v~~~~i~~~l~~adi~v~~~~~s~~e~~p  378 (473)
                      --++|+|.|-.  .+++.++++.++++-+.              ++|..  ........++..||++++.-+ .... . 
T Consensus        32 rPvii~G~G~~~a~~~l~~lae~~~~Pv~tt~~~~g~~~~~hp~~~G~~G~~~~~~~~~~i~~aDlil~vG~-~l~~-~-  108 (183)
T d2ez9a1          32 RPLIYYGIGARKAGKELEQLSKTLKIPLMSTYPAKGIVADRYPAYLGSANRVAQKPANEALAQADVVLFVGN-NYPF-A-  108 (183)
T ss_dssp             SEEEEECGGGTTCHHHHHHHHHHHTCCEEECGGGTTSSCTTCTTBCCCCSSSSCHHHHHHHHHCSEEEEESC-CCTT-T-
T ss_pred             CeEEEEcCCcccchHHHHHHhhccceEEEeeccccccccccCccccccccccccHHHHhhhhccCceEEeec-ccCc-c-
Confidence            36789998743  36789999999875332              22210  224567888999999998521 1111 1 


Q ss_pred             HHHHHHHhcCCcEEEeccCccccceec--CCceEEeCCHHHHHHHHHHHHhC
Q 011979          379 MKVVDMFGCGLPVCAVSYSCIEELVKV--DKNGLLFSSSSELADQLLMLFKG  428 (473)
Q Consensus       379 ~kv~Eama~G~PvI~~~~~~~~e~i~~--~~~G~~~~~~~~la~~i~~l~~~  428 (473)
                       .....+.-+..+|..+... .++-..  ...+ ++.|+....++|...++.
T Consensus       109 -~~~~~~~~~~~iI~Id~d~-~~i~~~~~~~~~-i~~D~~~~l~~L~~~l~~  157 (183)
T d2ez9a1         109 -EVSKAFKNTRYFLQIDIDP-AKLGKRHKTDIA-VLADAQKTLAAILAQVSE  157 (183)
T ss_dssp             -TTTTTTTTCSEEEEEESCG-GGTTSSSCCSEE-EESCHHHHHHHHHHTCCC
T ss_pred             -cceeecccccchheeeccH-HHHhhcCCCCeE-EEECHHHHHHHHHHHhhh
Confidence             1123455677888776543 222211  1223 334676777777666654

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=81.78  E-value=10  Score=30.81  Aligned_cols=107  Identities=9%  Similarity=0.024  Sum_probs=63.5

Q ss_pred             CCEEEEEEcCCCChHHHHHHHHHcCCCcEEEecC---------------CCCcccHHHHHhcCcEEEEeccCCCCC-CCc
Q 011979          315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTM---------------WLSAEDYPLLLGSADLGVCLHTSSSGL-DLP  378 (473)
Q Consensus       315 ~~~~l~ivG~g~~~~~l~~~~~~~~l~~V~~~g~---------------~v~~~~i~~~l~~adi~v~~~~~s~~e-~~p  378 (473)
                      .+-+++|+|.|..-..+-+.....|.+++.+..+               +++.+++.+.+.++|+.+..  ++..+ -+.
T Consensus        23 ~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~~l~~~Divi~a--tss~~~ii~  100 (159)
T d1gpja2          23 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSA--TAAPHPVIH  100 (159)
T ss_dssp             TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEEC--CSSSSCCBC
T ss_pred             ccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccccchhHHHHhccCCEEEEe--cCCCCcccc
Confidence            4668899998865544555555555555555544               25568999999999999983  22222 244


Q ss_pred             HHHHHHHh----cCCcEEEeccCcccc---ceecCCceEEeCCHHHHHHHHHH
Q 011979          379 MKVVDMFG----CGLPVCAVSYSCIEE---LVKVDKNGLLFSSSSELADQLLM  424 (473)
Q Consensus       379 ~kv~Eama----~G~PvI~~~~~~~~e---~i~~~~~G~~~~~~~~la~~i~~  424 (473)
                      -..++...    .+.|.+..|.+-.++   -+... .|+..=|.++|.+...+
T Consensus       101 ~~~i~~~~~~r~~~~~~~iiDlavPr~vd~~v~~~-~~v~l~~ld~l~~~~~~  152 (159)
T d1gpja2         101 VDDVREALRKRDRRSPILIIDIANPRDVEEGVENI-EDVEVRTIDDLRVIARE  152 (159)
T ss_dssp             HHHHHHHHHHCSSCCCEEEEECCSSCSBCTTGGGS-TTEEEEEHHHHHHHHHH
T ss_pred             HhhhHHHHHhcccCCCeEEEeecCCCCcChhhhcc-CCeEEEeHHHHHHHHHH
Confidence            44554332    578999998754432   23222 23444356665554443