Citrus Sinensis ID: 011993

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470---
MEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK
ccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccEEcccccccccEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHccccccccccccHHHHHHHHccccccccEEEccccccccccccccccccccccccccHHHHHHHHcccccccHHHHHHHHcccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEEcccccEEEEEEccccccEEEEccccccccccEEEEEcccccccccccccccccccEEEEcccEEEEEEEc
cccccccHHHccccccccccEcccccEcHHHcccEEcccEEHHHHHHHHHHHHccccEEEEEEcccEcccccccccEEEEEEcccccEEcEccccccEcccccccccEccccHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHccccccccccHHHHHHHccccHHEEEEEEcccccccccEccccccccccHHHccccHHHHHHHHccccccHHHHHHHHcccHHHHHHHcccHHHEEEcccccccccHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccEEEEEccHHHccccccccccccccccccEEccHcccHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEcccccccccEEEEEEEccccccEEEEEEEcccccEEEEccccccccEEEEEEEcccccccccccccccccccEEEEcccEEEEEEcc
mefqrrrnprdhmvntwgystinffspmsryaaggggplkASWEFKEMVKALHGAGIEVILDVVYNhtneaddanpyttsfrgidnkvYYMVDGTGqllnyagcgntlncnhPVVMELILDSLRHWVVEYHVDGFRFDLASVlcrgtdgsplnappLIRAIAKDAILSRCKIiaepwdcrglylvgkfpnwdrwaewNGKYRDDLRkfikgdpgmkGILATRisgssdlyrvnkrkpyhsinfiiahdgftlyDLVSynykhneangeggndgcndnfswncgfegetdDASIKALRSRQMKNFHLALMVsqgtpmmlmgdeyghtrygnnnsyghdtainnfqwgqletkknshYRFFSEVIKFRQsrrvfgredflnindvtwhednwdnydSKFLAFTLHDNNGADIYLAFNahdffvkvslpppppkrqwfrvvdtnlespddivpegaagtgstynlspyssilleak
mefqrrrnprdhmvntwGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNeaddanpyttsfrgiDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIaepwdcrglylVGKFPNWDRWAEWNGKYRDDLRKfikgdpgmkgilatrisgssdlyRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEangeggndgcNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKfrqsrrvfgredFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLespddivpegaagtgstynlspyssilleak
MEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHneangeggndgcndnFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK
************MVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKV**************************************************
MEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK
*********RDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK
MEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHN****************W***FEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK
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MEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query473 2.2.26 [Sep-21-2011]
Q9M0S5764 Isoamylase 3, chloroplast yes no 1.0 0.619 0.805 0.0
O04196783 Isoamylase 1, chloroplast no no 0.964 0.582 0.493 1e-126
P0A4Y4721 Glycogen operon protein G yes no 0.892 0.585 0.465 4e-99
P0A4Y5721 Glycogen operon protein G yes no 0.892 0.585 0.465 4e-99
A8GKU9661 Glycogen debranching enzy yes no 0.739 0.529 0.480 3e-82
Q6CZK1658 Glycogen debranching enzy yes no 0.780 0.560 0.449 4e-80
C6DH78658 Glycogen debranching enzy yes no 0.761 0.547 0.453 2e-79
A4WFL4657 Glycogen debranching enzy yes no 0.854 0.614 0.419 4e-79
P45178659 Glycogen operon protein G yes no 0.801 0.575 0.414 2e-78
B2VJR7658 Glycogen debranching enzy yes no 0.727 0.522 0.459 2e-77
>sp|Q9M0S5|ISOA3_ARATH Isoamylase 3, chloroplastic OS=Arabidopsis thaliana GN=ISA3 PE=1 SV=2 Back     alignment and function desciption
 Score =  830 bits (2144), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/474 (80%), Positives = 423/474 (89%), Gaps = 1/474 (0%)

Query: 1   MEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVI 60
           +E QRR NPRDHMVNTWGYST+NFF+PMSRYA+G G P+KAS EFKEMVKALH AGIEVI
Sbjct: 291 LELQRRSNPRDHMVNTWGYSTVNFFAPMSRYASGEGDPIKASKEFKEMVKALHSAGIEVI 350

Query: 61  LDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELIL 120
           LDVVYNHTNEADD  PYTTSFRGIDNKVYYM+D   QLLN++GCGNTLNCNHPVVMELIL
Sbjct: 351 LDVVYNHTNEADDKYPYTTSFRGIDNKVYYMLDPNNQLLNFSGCGNTLNCNHPVVMELIL 410

Query: 121 DSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCR 180
           DSLRHWV EYHVDGFRFDLASVLCR TDGSPL+APPLIRAIAKD++LSRCKIIAEPWDC 
Sbjct: 411 DSLRHWVTEYHVDGFRFDLASVLCRATDGSPLSAPPLIRAIAKDSVLSRCKIIAEPWDCG 470

Query: 181 GLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHS 240
           GLYLVGKFPNWDRWAEWNG YRDD+R+FIKGD GMKG  ATR+SGSSDLY+VN+RKPYH 
Sbjct: 471 GLYLVGKFPNWDRWAEWNGMYRDDVRRFIKGDSGMKGSFATRVSGSSDLYQVNQRKPYHG 530

Query: 241 INFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQ 300
           +NF+IAHDGFTL DLVSYN+KHNEANGEGGNDGCNDN SWNCGFEGET DA IK+LR+RQ
Sbjct: 531 VNFVIAHDGFTLRDLVSYNFKHNEANGEGGNDGCNDNHSWNCGFEGETGDAHIKSLRTRQ 590

Query: 301 MKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFS 360
           MKNFHLALM+SQGTPMMLMGDEYGHTRYGNNNSYGHDT++NNFQW +L+ KK +H+RFFS
Sbjct: 591 MKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTSLNNFQWKELDAKKQNHFRFFS 650

Query: 361 EVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDN-NGADIYLAFNAHDF 419
           EVIKFR S  V   E+FL   ++TWHEDNWDN +SKFLAFTLHD   G DIY+AFNAHD+
Sbjct: 651 EVIKFRHSHHVLKHENFLTQGEITWHEDNWDNSESKFLAFTLHDGIGGRDIYVAFNAHDY 710

Query: 420 FVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK 473
           FVK  +P PPP +QWFRV DTNLESPDD V EG AG   TYN++P+SSILL++K
Sbjct: 711 FVKALIPQPPPGKQWFRVADTNLESPDDFVREGVAGVADTYNVAPFSSILLQSK 764
Involved in starch catabolism. ISA3 removes different branches than ISA1-ISA2, namely short chains that prevent amylopectin crystallization. May be the debranching enzyme required to assist beta-amylases for starch degradation in leaves at night.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 6EC: 8
>sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1 Back     alignment and function description
>sp|P0A4Y4|GLGX_MYCTU Glycogen operon protein GlgX homolog OS=Mycobacterium tuberculosis GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|P0A4Y5|GLGX_MYCBO Glycogen operon protein GlgX homolog OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|A8GKU9|GLGX_SERP5 Glycogen debranching enzyme OS=Serratia proteamaculans (strain 568) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|Q6CZK1|GLGX_ERWCT Glycogen debranching enzyme OS=Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|C6DH78|GLGX_PECCP Glycogen debranching enzyme OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|A4WFL4|GLGX_ENT38 Glycogen debranching enzyme OS=Enterobacter sp. (strain 638) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|P45178|GLGX_HAEIN Glycogen operon protein GlgX homolog OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|B2VJR7|GLGX_ERWT9 Glycogen debranching enzyme OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=glgX PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query473
359492463 784 PREDICTED: isoamylase 3, chloroplastic-l 1.0 0.603 0.842 0.0
302142002 775 unnamed protein product [Vitis vinifera] 1.0 0.610 0.842 0.0
255545834 783 isoamylase, putative [Ricinus communis] 1.0 0.604 0.825 0.0
289546597548 isoamylase isoform 3, partial [Manihot e 1.0 0.863 0.833 0.0
356508064 783 PREDICTED: isoamylase 3, chloroplastic-l 1.0 0.604 0.822 0.0
73698629 736 isoamylase isoform 3 [Pisum sativum] 1.0 0.642 0.816 0.0
356518455 772 PREDICTED: isoamylase 3, chloroplastic-l 1.0 0.612 0.820 0.0
139867062 783 isoamylase-type starch-debranching enzym 1.0 0.604 0.822 0.0
224063283 819 predicted protein [Populus trichocarpa] 1.0 0.577 0.798 0.0
27728149 766 isoamylase isoform 3 [Solanum tuberosum] 1.0 0.617 0.808 0.0
>gi|359492463|ref|XP_002284042.2| PREDICTED: isoamylase 3, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  852 bits (2202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/475 (84%), Positives = 429/475 (90%), Gaps = 2/475 (0%)

Query: 1   MEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVI 60
            EFQRR NPRDHM+NTWGYSTINFF+PMSRYA+ GGGP+KAS EFKEMVKALHGAGIEVI
Sbjct: 309 FEFQRRPNPRDHMINTWGYSTINFFAPMSRYASAGGGPIKASREFKEMVKALHGAGIEVI 368

Query: 61  LDVVYNHTNEADDANPYTTSFRGIDNKVYYMVD--GTGQLLNYAGCGNTLNCNHPVVMEL 118
           LDVVYNHTNEADD NPYTTSFRGIDNKVYYMVD    GQLLN++GCGNTLNCNHP+VMEL
Sbjct: 369 LDVVYNHTNEADDENPYTTSFRGIDNKVYYMVDLNNEGQLLNFSGCGNTLNCNHPMVMEL 428

Query: 119 ILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWD 178
           ILDSLRHWV+EYHVDGFRFDLASVLCRGTDGSPLNAPP+IR IAKD ILSRCKIIAEPWD
Sbjct: 429 ILDSLRHWVIEYHVDGFRFDLASVLCRGTDGSPLNAPPIIREIAKDDILSRCKIIAEPWD 488

Query: 179 CRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPY 238
           C GLYLVG+FPNWDRWAEWNGKYRDDLR+FIKGDPG KG  ATR++GSSDLY+VNKRKPY
Sbjct: 489 CGGLYLVGRFPNWDRWAEWNGKYRDDLRRFIKGDPGTKGNFATRVAGSSDLYKVNKRKPY 548

Query: 239 HSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRS 298
           HS+NF+IAHDGFTLYDLVSYN KHN ANGEGG DG NDNFSWNCGFEGET DA IKALRS
Sbjct: 549 HSVNFVIAHDGFTLYDLVSYNSKHNNANGEGGKDGTNDNFSWNCGFEGETADAKIKALRS 608

Query: 299 RQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRF 358
           RQMKNFHLALM SQGTPMMLMGDEYGHTRYGNNNSYGHDTAIN+F WGQL+++K   +RF
Sbjct: 609 RQMKNFHLALMCSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINHFLWGQLDSRKRDRFRF 668

Query: 359 FSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHD 418
           F EVIKFR+   VFGRE+FL   DVTWHEDNWDNY+SKFLAFTLH NNG DIYLAFN HD
Sbjct: 669 FKEVIKFRRMHHVFGRENFLEKKDVTWHEDNWDNYESKFLAFTLHANNGGDIYLAFNTHD 728

Query: 419 FFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK 473
           FFVKV++P PP  R+WFRVVDTNLESP D V EG  G GS YN++PYSSILLEAK
Sbjct: 729 FFVKVAIPSPPANRRWFRVVDTNLESPKDFVSEGVPGIGSAYNVAPYSSILLEAK 783

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|302142002|emb|CBI19205.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255545834|ref|XP_002513977.1| isoamylase, putative [Ricinus communis] gi|223547063|gb|EEF48560.1| isoamylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|289546597|gb|ADD10143.1| isoamylase isoform 3, partial [Manihot esculenta] Back     alignment and taxonomy information
>gi|356508064|ref|XP_003522781.1| PREDICTED: isoamylase 3, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|73698629|gb|AAZ81837.1| isoamylase isoform 3 [Pisum sativum] Back     alignment and taxonomy information
>gi|356518455|ref|XP_003527894.1| PREDICTED: isoamylase 3, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|139867062|dbj|BAF52943.1| isoamylase-type starch-debranching enzyme 3 [Phaseolus vulgaris] Back     alignment and taxonomy information
>gi|224063283|ref|XP_002301076.1| predicted protein [Populus trichocarpa] gi|222842802|gb|EEE80349.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|27728149|gb|AAN15319.1| isoamylase isoform 3 [Solanum tuberosum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query473
TAIR|locus:2122343764 ISA3 "isoamylase 3" [Arabidops 1.0 0.619 0.774 4.8e-213
TAIR|locus:2061216783 ISA1 "isoamylase 1" [Arabidops 0.638 0.385 0.475 2e-115
UNIPROTKB|Q8EGU6750 glgX "Glycogen isoamylase GlgX 0.725 0.457 0.452 9.6e-73
TIGR_CMR|SO_1495750 SO_1495 "glycogen operon prote 0.725 0.457 0.452 9.6e-73
UNIPROTKB|Q9KKS1656 VC_A1029 "Glycogen operon prot 0.871 0.628 0.375 1.8e-64
TIGR_CMR|VC_A1029656 VC_A1029 "glycogen operon prot 0.871 0.628 0.375 1.8e-64
UNIPROTKB|P15067657 glgX [Escherichia coli K-12 (t 0.701 0.505 0.428 2.6e-63
TAIR|locus:2014500882 DBE1 "debranching enzyme 1" [A 0.890 0.477 0.355 4.4e-61
UNIPROTKB|Q81KP1713 BAS4597 "Putative pullulanase" 0.469 0.311 0.298 2.6e-23
TIGR_CMR|BA_4953713 BA_4953 "pullulanase, putative 0.469 0.311 0.298 2.6e-23
TAIR|locus:2122343 ISA3 "isoamylase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2059 (729.9 bits), Expect = 4.8e-213, P = 4.8e-213
 Identities = 367/474 (77%), Positives = 408/474 (86%)

Query:     1 MEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVI 60
             +E QRR NPRDHMVNTWGYST+NFF+PMSRYA+G G P+KAS EFKEMVKALH AGIEVI
Sbjct:   291 LELQRRSNPRDHMVNTWGYSTVNFFAPMSRYASGEGDPIKASKEFKEMVKALHSAGIEVI 350

Query:    61 LDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELIL 120
             LDVVYNHTNEADD  PYTTSFRGIDNKVYYM+D   QLLN++GCGNTLNCNHPVVMELIL
Sbjct:   351 LDVVYNHTNEADDKYPYTTSFRGIDNKVYYMLDPNNQLLNFSGCGNTLNCNHPVVMELIL 410

Query:   121 DSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCR 180
             DSLRHWV EYHVDGFRFDLASVLCR TDGSPL+APPLIRAIAKD++LSRCKIIAEPWDC 
Sbjct:   411 DSLRHWVTEYHVDGFRFDLASVLCRATDGSPLSAPPLIRAIAKDSVLSRCKIIAEPWDCG 470

Query:   181 GLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHS 240
             GLYLVGKFPNWDRWAEWNG YRDD+R+FIKGD GMKG  ATR+SGSSDLY+VN+RKPYH 
Sbjct:   471 GLYLVGKFPNWDRWAEWNGMYRDDVRRFIKGDSGMKGSFATRVSGSSDLYQVNQRKPYHG 530

Query:   241 INFIIAHDGFTLYDLVSYNYKHXXXXXXXXXXXXXXXFSWNCGFEGETDDASIKALRSRQ 300
             +NF+IAHDGFTL DLVSYN+KH                SWNCGFEGET DA IK+LR+RQ
Sbjct:   531 VNFVIAHDGFTLRDLVSYNFKHNEANGEGGNDGCNDNHSWNCGFEGETGDAHIKSLRTRQ 590

Query:   301 MKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFS 360
             MKNFHLALM+SQGTPMMLMGDEYGHTRYGNNNSYGHDT++NNFQW +L+ KK +H+RFFS
Sbjct:   591 MKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTSLNNFQWKELDAKKQNHFRFFS 650

Query:   361 EVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDN-NGADIYLAFNAHDF 419
             EVIKFR S  V   E+FL   ++TWHEDNWDN +SKFLAFTLHD   G DIY+AFNAHD+
Sbjct:   651 EVIKFRHSHHVLKHENFLTQGEITWHEDNWDNSESKFLAFTLHDGIGGRDIYVAFNAHDY 710

Query:   420 FVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK 473
             FVK  +P PPP +QWFRV DTNLESPDD V EG AG   TYN++P+SSILL++K
Sbjct:   711 FVKALIPQPPPGKQWFRVADTNLESPDDFVREGVAGVADTYNVAPFSSILLQSK 764
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004556 "alpha-amylase activity" evidence=ISS
GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0043169 "cation binding" evidence=IEA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009569 "chloroplast starch grain" evidence=IDA
GO:0005983 "starch catabolic process" evidence=IMP
GO:0019156 "isoamylase activity" evidence=IDA
GO:0000272 "polysaccharide catabolic process" evidence=RCA
GO:0005982 "starch metabolic process" evidence=RCA
GO:0009664 "plant-type cell wall organization" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
TAIR|locus:2061216 ISA1 "isoamylase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8EGU6 glgX "Glycogen isoamylase GlgX" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|SO_1495 SO_1495 "glycogen operon protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KKS1 VC_A1029 "Glycogen operon protein GlgX" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_A1029 VC_A1029 "glycogen operon protein GlgX" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
UNIPROTKB|P15067 glgX [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TAIR|locus:2014500 DBE1 "debranching enzyme 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q81KP1 BAS4597 "Putative pullulanase" [Bacillus anthracis (taxid:1392)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4953 BA_4953 "pullulanase, putative" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M0S5ISOA3_ARATH3, ., 2, ., 1, ., 6, 80.80591.00.6191yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.680.946
3rd Layer3.2.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query473
cd11326433 cd11326, AmyAc_Glg_debranch, Alpha amylase catalyt 0.0
COG1523697 COG1523, PulA, Type II secretory pathway, pullulan 1e-176
TIGR02100688 TIGR02100, glgX_debranch, glycogen debranching enz 1e-168
PRK03705658 PRK03705, PRK03705, glycogen debranching enzyme; P 1e-126
PRK14510 1221 PRK14510, PRK14510, putative bifunctional 4-alpha- 1e-109
cd11346347 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic 5e-79
cd11341406 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase 6e-54
TIGR02104605 TIGR02104, pulA_typeI, pullulanase, type I 8e-47
TIGR02103898 TIGR02103, pullul_strch, alpha-1,6-glucosidases, p 2e-20
cd00551260 cd00551, AmyAc_family, Alpha amylase catalytic dom 3e-19
cd11350390 cd11350, AmyAc_4, Alpha amylase catalytic domain f 8e-19
TIGR02102 1111 TIGR02102, pullulan_Gpos, pullulanase, extracellul 9e-19
cd11325436 cd11325, AmyAc_GTHase, Alpha amylase catalytic dom 1e-18
PLN02877970 PLN02877, PLN02877, alpha-amylase/limit dextrinase 2e-18
COG0296628 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [ 2e-16
cd11321406 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic 8e-16
cd11313336 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase cataly 2e-13
TIGR02402544 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose 1e-12
cd11322402 cd11322, AmyAc_Glg_BE, Alpha amylase catalytic dom 6e-11
cd11338389 cd11338, AmyAc_CMD, Alpha amylase catalytic domain 1e-10
cd11353366 cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase cat 1e-09
cd11337328 cd11337, AmyAc_CMD_like, Alpha amylase catalytic d 9e-09
PLN02447758 PLN02447, PLN02447, 1,4-alpha-glucan-branching enz 2e-08
PRK12313633 PRK12313, PRK12313, glycogen branching enzyme; Pro 3e-08
PRK14706639 PRK14706, PRK14706, glycogen branching enzyme; Pro 3e-07
cd11315352 cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic 4e-07
PLN02960897 PLN02960, PLN02960, alpha-amylase 5e-07
pfam00128314 pfam00128, Alpha-amylase, Alpha amylase, catalytic 6e-07
cd11339344 cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catal 1e-06
COG0366505 COG0366, AmyA, Glycosidases [Carbohydrate transpor 2e-06
PRK12568730 PRK12568, PRK12568, glycogen branching enzyme; Pro 2e-06
PLN03244872 PLN03244, PLN03244, alpha-amylase; Provisional 7e-06
PRK05402726 PRK05402, PRK05402, glycogen branching enzyme; Pro 7e-06
PRK10785598 PRK10785, PRK10785, maltodextrin glucosidase; Prov 7e-06
smart00642166 smart00642, Aamy, Alpha-amylase domain 3e-05
PRK147051224 PRK14705, PRK14705, glycogen branching enzyme; Pro 4e-05
TIGR01515618 TIGR01515, branching_enzym, alpha-1,4-glucan:alpha 5e-05
cd11320389 cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase 8e-05
cd11316403 cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic 1e-04
cd11330472 cd11330, AmyAc_OligoGlu, Alpha amylase catalytic d 2e-04
cd11354357 cd11354, AmyAc_bac_CMD_like, Alpha amylase catalyt 5e-04
PLN00196428 PLN00196, PLN00196, alpha-amylase; Provisional 0.001
PRK09441479 PRK09441, PRK09441, cytoplasmic alpha-amylase; Rev 0.001
TIGR02456539 TIGR02456, treS_nterm, trehalose synthase 0.001
cd11346347 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic 0.002
cd11332481 cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalyti 0.002
cd11329477 cd11329, AmyAc_maltase-like, Alpha amylase catalyt 0.003
cd11314302 cd11314, AmyAc_arch_bac_plant_AmyA, Alpha amylase 0.003
TIGR02403543 TIGR02403, trehalose_treC, alpha,alpha-phosphotreh 0.003
cd11317329 cd11317, AmyAc_bac_euk_AmyA, Alpha amylase catalyt 0.004
>gnl|CDD|200465 cd11326, AmyAc_Glg_debranch, Alpha amylase catalytic domain found in glycogen debranching enzymes Back     alignment and domain information 
 Score =  622 bits (1608), Expect = 0.0
 Identities = 214/371 (57%), Positives = 253/371 (68%), Gaps = 8/371 (2%)

Query: 1   MEFQRRRNPRD-HMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEV 59
             F    +  +  + N WGY+T+NFF+P  RYA+    P     EFK MVKALH AGIEV
Sbjct: 67  HAFDDEEHLVERGLTNYWGYNTLNFFAPDPRYASDDA-PGGPVDEFKAMVKALHKAGIEV 125

Query: 60  ILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQ-LLNYAGCGNTLNCNHPVVMEL 118
           ILDVVYNHT E  +  P T SFRG+DN  YY +D  G   LNY GCGNTLN NHPVV+ L
Sbjct: 126 ILDVVYNHTAEGGELGP-TLSFRGLDNASYYRLDPDGPYYLNYTGCGNTLNTNHPVVLRL 184

Query: 119 ILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWD 178
           ILDSLR+WV E HVDGFRFDLASVL R  DG P   PPL+ AIA+D +LS  K+IAEPWD
Sbjct: 185 ILDSLRYWVTEMHVDGFRFDLASVLGRDPDGFPDPNPPLLEAIAQDPVLSGVKLIAEPWD 244

Query: 179 CRGL-YLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKP 237
             G  Y VG FP    WAEWN +YRDD+R+F +GD G+ G  ATR++GSSDL+  + R P
Sbjct: 245 IGGGGYQVGNFPPG--WAEWNDRYRDDVRRFWRGDGGLVGDFATRLAGSSDLFGHDGRSP 302

Query: 238 YHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALR 297
             S+NFI AHDGFTL DLVSYN KHNEANGE   DG NDN SWNCG EG TDD  I ALR
Sbjct: 303 SASVNFITAHDGFTLADLVSYNEKHNEANGENNRDGHNDNLSWNCGVEGPTDDPEILALR 362

Query: 298 SRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYR 357
            RQM+N    L++SQGTPM+L GDE+G T+ GNNN+Y  D  I+   W  LE   +  +R
Sbjct: 363 RRQMRNLLATLLLSQGTPMLLAGDEFGRTQQGNNNAYCQDNEISWLDWDLLE-ADSDLFR 421

Query: 358 FFSEVIKFRQS 368
           F   +I  R++
Sbjct: 422 FVRRLIALRKA 432

Debranching enzymes facilitate the breakdown of glycogen through glucosyltransferase and glucosidase activity. These activities are performed by a single enzyme in mammals, yeast, and some bacteria, but by two distinct enzymes in Escherichia coli and other bacteria. Debranching enzymes perform two activities: 4-alpha-D-glucanotransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). 4-alpha-D-glucanotransferase catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. Amylo-alpha-1,6-glucosidase catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. In Escherichia coli, GlgX is the debranching enzyme and malQ is the 4-alpha-glucanotransferase. TreX, an archaeal glycogen-debranching enzyme has dual activities like mammals and yeast, but is structurally similar to GlgX. TreX exists in two oligomeric states, a dimer and tetramer. Isoamylase (EC 3.2.1.68) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen and their beta-limit dextrins. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Length = 433
>gnl|CDD|224440 COG1523, PulA, Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|131155 TIGR02100, glgX_debranch, glycogen debranching enzyme GlgX Back     alignment and domain information
>gnl|CDD|235152 PRK03705, PRK03705, glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|237739 PRK14510, PRK14510, putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|200484 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic domain family found in plant isoamylases Back     alignment and domain information
>gnl|CDD|200480 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase catalytic domain found in Pullulanase (also called dextrinase; alpha-dextrin endo-1,6-alpha glucosidase), limit dextrinase, and related proteins Back     alignment and domain information
>gnl|CDD|233730 TIGR02104, pulA_typeI, pullulanase, type I Back     alignment and domain information
>gnl|CDD|233729 TIGR02103, pullul_strch, alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>gnl|CDD|200451 cd00551, AmyAc_family, Alpha amylase catalytic domain family Back     alignment and domain information
>gnl|CDD|200488 cd11350, AmyAc_4, Alpha amylase catalytic domain found in an uncharacterized protein family Back     alignment and domain information
>gnl|CDD|233728 TIGR02102, pullulan_Gpos, pullulanase, extracellular, Gram-positive Back     alignment and domain information
>gnl|CDD|200464 cd11325, AmyAc_GTHase, Alpha amylase catalytic domain found in Glycosyltrehalose trehalohydrolase (also called Maltooligosyl trehalose Trehalohydrolase) Back     alignment and domain information
>gnl|CDD|215474 PLN02877, PLN02877, alpha-amylase/limit dextrinase Back     alignment and domain information
>gnl|CDD|223373 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|200460 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic domain found in bacterial and eukaryotic branching enzymes Back     alignment and domain information
>gnl|CDD|200452 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|233850 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>gnl|CDD|200461 cd11322, AmyAc_Glg_BE, Alpha amylase catalytic domain found in the Glycogen branching enzyme (also called 1,4-alpha-glucan branching enzyme) Back     alignment and domain information
>gnl|CDD|200477 cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|200490 cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase catalytic domain found in eukaryotic and bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|200476 cd11337, AmyAc_CMD_like, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|215246 PLN02447, PLN02447, 1,4-alpha-glucan-branching enzyme Back     alignment and domain information
>gnl|CDD|237052 PRK12313, PRK12313, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|237795 PRK14706, PRK14706, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|200454 cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|215519 PLN02960, PLN02960, alpha-amylase Back     alignment and domain information
>gnl|CDD|215737 pfam00128, Alpha-amylase, Alpha amylase, catalytic domain Back     alignment and domain information
>gnl|CDD|200478 cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|223443 COG0366, AmyA, Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|139075 PRK12568, PRK12568, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|178782 PLN03244, PLN03244, alpha-amylase; Provisional Back     alignment and domain information
>gnl|CDD|235445 PRK05402, PRK05402, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|236759 PRK10785, PRK10785, maltodextrin glucosidase; Provisional Back     alignment and domain information
>gnl|CDD|214758 smart00642, Aamy, Alpha-amylase domain Back     alignment and domain information
>gnl|CDD|237794 PRK14705, PRK14705, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|188150 TIGR01515, branching_enzym, alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>gnl|CDD|200459 cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase catalytic domain found in maltogenic amylases, cyclodextrin glycosyltransferase, and related proteins Back     alignment and domain information
>gnl|CDD|200455 cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200469 cd11330, AmyAc_OligoGlu, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase) and related proteins Back     alignment and domain information
>gnl|CDD|200491 cd11354, AmyAc_bac_CMD_like, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|165762 PLN00196, PLN00196, alpha-amylase; Provisional Back     alignment and domain information
>gnl|CDD|236518 PRK09441, PRK09441, cytoplasmic alpha-amylase; Reviewed Back     alignment and domain information
>gnl|CDD|233874 TIGR02456, treS_nterm, trehalose synthase Back     alignment and domain information
>gnl|CDD|200484 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic domain family found in plant isoamylases Back     alignment and domain information
>gnl|CDD|200471 cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins Back     alignment and domain information
>gnl|CDD|200468 cd11329, AmyAc_maltase-like, Alpha amylase catalytic domain family found in maltase Back     alignment and domain information
>gnl|CDD|200453 cd11314, AmyAc_arch_bac_plant_AmyA, Alpha amylase catalytic domain found in archaeal, bacterial, and plant Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|233851 TIGR02403, trehalose_treC, alpha,alpha-phosphotrehalase Back     alignment and domain information
>gnl|CDD|200456 cd11317, AmyAc_bac_euk_AmyA, Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 473
TIGR02100688 glgX_debranch glycogen debranching enzyme GlgX. Th 100.0
PRK03705658 glycogen debranching enzyme; Provisional 100.0
PRK14510 1221 putative bifunctional 4-alpha-glucanotransferase/g 100.0
COG1523697 PulA Type II secretory pathway, pullulanase PulA a 100.0
TIGR02403543 trehalose_treC alpha,alpha-phosphotrehalase. Treha 100.0
PRK10785598 maltodextrin glucosidase; Provisional 100.0
PRK10933551 trehalose-6-phosphate hydrolase; Provisional 100.0
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 100.0
TIGR02456539 treS_nterm trehalose synthase. Trehalose synthase 100.0
TIGR02102 1111 pullulan_Gpos pullulanase, extracellular, Gram-pos 100.0
PRK14706639 glycogen branching enzyme; Provisional 100.0
PRK12313633 glycogen branching enzyme; Provisional 100.0
PRK12568730 glycogen branching enzyme; Provisional 100.0
TIGR01515613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 100.0
PRK05402726 glycogen branching enzyme; Provisional 100.0
PRK09505683 malS alpha-amylase; Reviewed 100.0
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 100.0
PRK147051224 glycogen branching enzyme; Provisional 100.0
PRK09441479 cytoplasmic alpha-amylase; Reviewed 100.0
PLN02877970 alpha-amylase/limit dextrinase 100.0
TIGR02103898 pullul_strch alpha-1,6-glucosidases, pullulanase-t 100.0
TIGR03852470 sucrose_gtfA sucrose phosphorylase. In the forward 100.0
PLN02960897 alpha-amylase 100.0
PLN02447758 1,4-alpha-glucan-branching enzyme 100.0
PRK13840495 sucrose phosphorylase; Provisional 100.0
KOG0470757 consensus 1,4-alpha-glucan branching enzyme/starch 100.0
PLN03244872 alpha-amylase; Provisional 100.0
PLN00196428 alpha-amylase; Provisional 100.0
PLN02361401 alpha-amylase 100.0
COG0296628 GlgB 1,4-alpha-glucan branching enzyme [Carbohydra 100.0
PF00128316 Alpha-amylase: Alpha amylase, catalytic domain; In 100.0
TIGR02455688 TreS_stutzeri trehalose synthase, Pseudomonas stut 100.0
COG0366505 AmyA Glycosidases [Carbohydrate transport and meta 100.0
KOG0471545 consensus Alpha-amylase [Carbohydrate transport an 100.0
PLN02784894 alpha-amylase 100.0
TIGR02401825 trehalose_TreY malto-oligosyltrehalose synthase. T 99.97
PRK14511879 maltooligosyl trehalose synthase; Provisional 99.94
KOG2212504 consensus Alpha-amylase [Carbohydrate transport an 99.91
smart00642166 Aamy Alpha-amylase domain. 99.58
PRK14507 1693 putative bifunctional 4-alpha-glucanotransferase/m 99.56
PF14872811 GHL5: Hypothetical glycoside hydrolase 5 99.46
COG3280 889 TreY Maltooligosyl trehalose synthase [Carbohydrat 99.41
TIGR01531 1464 glyc_debranch glycogen debranching enzymye. glycog 99.32
PF1194189 DUF3459: Domain of unknown function (DUF3459); Int 99.16
PF0280695 Alpha-amylase_C: Alpha amylase, C-terminal all-bet 98.57
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 98.38
PF11852168 DUF3372: Domain of unknown function (DUF3372); Int 98.36
PF02324 809 Glyco_hydro_70: Glycosyl hydrolase family 70; Inte 98.1
PF14701423 hDGE_amylase: glucanotransferase domain of human g 97.93
PF1043878 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal 97.93
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 97.92
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 97.8
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 97.69
cd06597340 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide 97.68
KOG3625 1521 consensus Alpha amylase [Carbohydrate transport an 97.58
PF0853358 Glyco_hydro_42C: Beta-galactosidase C-terminal dom 97.55
cd06594317 GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl 97.54
smart0063281 Aamy_C Aamy_C domain. 97.48
PF02065394 Melibiase: Melibiase; InterPro: IPR000111 O-Glycos 97.37
cd06599317 GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 97.36
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 97.33
PRK145071693 putative bifunctional 4-alpha-glucanotransferase/m 97.18
cd06600317 GH31_MGAM-like This family includes the following 97.12
PRK10658665 putative alpha-glucosidase; Provisional 96.98
cd06602339 GH31_MGAM_SI_GAA This family includes the followin 96.96
PLN02635538 disproportionating enzyme 96.81
PRK14508497 4-alpha-glucanotransferase; Provisional 96.79
cd06604339 GH31_glucosidase_II_MalA Alpha-glucosidase II (alp 96.54
COG1649418 Uncharacterized protein conserved in bacteria [Fun 96.53
PF01055441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 96.46
cd06598317 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide 96.42
COG1501772 Alpha-glucosidases, family 31 of glycosyl hydrolas 96.36
PF13200316 DUF4015: Putative glycosyl hydrolase domain 96.34
PRK10426635 alpha-glucosidase; Provisional 96.34
COG3280889 TreY Maltooligosyl trehalose synthase [Carbohydrat 95.9
PF13199559 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 95.69
PF02324809 Glyco_hydro_70: Glycosyl hydrolase family 70; Inte 95.67
PLN02763 978 hydrolase, hydrolyzing O-glycosyl compounds 95.43
cd06542255 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases 95.31
PRK145101221 putative bifunctional 4-alpha-glucanotransferase/g 95.28
cd06603339 GH31_GANC_GANAB_alpha This family includes the clo 95.27
PRK11052695 malQ 4-alpha-glucanotransferase; Provisional 95.14
cd06595292 GH31_xylosidase_XylS-like This family represents a 94.98
TIGR00217513 malQ 4-alpha-glucanotransferase. This enzyme is kn 94.94
cd02875358 GH18_chitobiase Chitobiase (also known as di-N-ace 94.17
COG3589360 Uncharacterized conserved protein [Function unknow 94.1
cd02871312 GH18_chitinase_D-like GH18 domain of Chitinase D ( 93.73
cd06601332 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) 93.1
TIGR01370315 cysRS possible cysteinyl-tRNA synthetase, Methanoc 92.92
COG1640520 MalQ 4-alpha-glucanotransferase [Carbohydrate tran 92.88
cd06545253 GH18_3CO4_chitinase The Bacteroides thetaiotaomicr 92.84
PF05913357 DUF871: Bacterial protein of unknown function (DUF 92.47
KOG1065805 consensus Maltase glucoamylase and related hydrola 92.35
PF02446496 Glyco_hydro_77: 4-alpha-glucanotransferase; InterP 92.05
cd06570311 GH20_chitobiase-like_1 A functionally uncharacteri 89.3
cd02742303 GH20_hexosaminidase Beta-N-acetylhexosaminidases o 87.48
cd06568329 GH20_SpHex_like A subgroup of the Glycosyl hydrola 86.1
cd06563357 GH20_chitobiase-like The chitobiase of Serratia ma 85.85
cd06564326 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 ( 85.18
cd06589265 GH31 The enzymes of glycosyl hydrolase family 31 ( 85.15
cd02874313 GH18_CFLE_spore_hydrolase Cortical fragment-lytic 84.25
PF00728351 Glyco_hydro_20: Glycosyl hydrolase family 20, cata 83.71
cd06562348 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases c 83.56
COG2342300 Predicted extracellular endo alpha-1,4 polygalacto 83.5
cd00598210 GH18_chitinase-like The GH18 (glycosyl hydrolase, 83.49
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 82.5
cd02932336 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN 82.3
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 82.23
cd02929370 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) 81.48
PF00724341 Oxidored_FMN: NADH:flavin oxidoreductase / NADH ox 81.32
PLN02411391 12-oxophytodienoate reductase 81.19
PF01120346 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 81.0
cd04747361 OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN 80.97
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 80.33
cd02877280 GH18_hevamine_XipI_class_III This conserved domain 80.06
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX Back     alignment and domain information 
Probab=100.00  E-value=1.1e-67  Score=554.99  Aligned_cols=456  Identities=49%  Similarity=0.834  Sum_probs=379.8

Q ss_pred             CCccccCCCC----CCCCCCcCCCCCcccCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEEecccccCCCCCCC
Q 011993            1 MEFQRRRNPR----DHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANP   76 (473)
Q Consensus         1 ~~~~~~~~~~----~~~~~~~GY~~~d~~~vdp~~Gt~~~~~~~~~edl~~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~   76 (473)
                      ||.+..+...    .+..+||||+++|||+|||+||+.+     +++|||+||++||++||+||||+|+|||+......+
T Consensus       204 ~Pi~~~~~~~~~~~~~~~~ywGYd~~~y~a~d~~y~~~g-----~~~efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~  278 (688)
T TIGR02100       204 LPVHAFIDDRHLLEKGLRNYWGYNTLGFFAPEPRYLASG-----QVAEFKTMVRALHDAGIEVILDVVYNHTAEGNELGP  278 (688)
T ss_pred             CCcccCCccccccccCCCCccCcCcccccccChhhcCCC-----CHHHHHHHHHHHHHCCCEEEEEECcCCccCcCCCCC
Confidence            6777765532    2345789999999999999996521     279999999999999999999999999998332223


Q ss_pred             ccccccCCCCccceeecCC--CCcccccCCcCCCCCCCHHHHHHHHHHHHHHHHhcCccEEEEecccccccCCCCCCCCC
Q 011993           77 YTTSFRGIDNKVYYMVDGT--GQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNA  154 (473)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dln~~np~V~~~i~~~~~~w~~~~giDGfR~Daa~~l~~~~~~~~~~~  154 (473)
                      .. .+.+.++..||...++  +.+.++++|+++||+++|+|+++|++++++|++++||||||+|+|..|..+.++ +...
T Consensus       279 ~~-~~~~~d~~~yy~~~~~~~~~~~~~~g~gn~ln~~~p~vr~~i~d~l~~W~~e~gIDGfR~D~a~~l~~~~~~-~~~~  356 (688)
T TIGR02100       279 TL-SFRGIDNASYYRLQPDDKRYYINDTGTGNTLNLSHPRVLQMVMDSLRYWVTEMHVDGFRFDLATTLGRELYG-FDML  356 (688)
T ss_pred             cc-cccCCCCCcceEecCCCCceecCCCCccccccCCCHHHHHHHHHHHHHHHHHcCCcEEEEechhhhccccCC-Cccc
Confidence            22 4556667788877554  677888999999999999999999999999999999999999999999876533 2335


Q ss_pred             HHHHHHHHhccccCCceEEecCCCCc-cccccCCCCCcchhhhhhhHHHHHHHHHHcCCCCcHHHHHHHhcCCccccccc
Q 011993          155 PPLIRAIAKDAILSRCKIIAEPWDCR-GLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVN  233 (473)
Q Consensus       155 ~~~~~~~~~~~~~~~~~li~E~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~  233 (473)
                      .++++++.++...|++++|||.|+.+ ..+..+.|+.  .++.||+.|++.++.|+.|..+....++..|.++..++...
T Consensus       357 ~~~~~~i~~d~~~~~~~ligE~W~~~~~~~~~~~~~~--~~~~~Nd~frd~ir~f~~g~~~~~~~~~~~l~gs~~~~~~~  434 (688)
T TIGR02100       357 SGFFTAIRQDPVLAQVKLIAEPWDIGPGGYQVGNFPP--GWAEWNDRYRDDMRRFWRGDAGMIGELANRLTGSSDLFEHN  434 (688)
T ss_pred             HHHHHHHHhCcccCCeEEEEeeecCCCCcccccCCCC--ceEEecHHHHHHHHHHHcCCCCcHHHHHHHHhCCHhhcccc
Confidence            67899999887889999999999876 5566666653  46899999999999999999988999999999988888766


Q ss_pred             CCCCCcceeEEEecCCCceeeeeeccccccccCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 011993          234 KRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQG  313 (473)
Q Consensus       234 ~~~~~~~~~f~~nHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~l~~pG  313 (473)
                      .+.|..++||+++||+.++.+++.+..+|+.++|+.+.+|.+.++||||+..|....+.....+.+++|++++++|++||
T Consensus       435 ~~~~~~~iNyv~~HD~~tl~D~~~~~~khn~~nge~n~dg~~~N~S~n~g~eG~~~~~~~~~~r~~~~r~~~a~l~~s~G  514 (688)
T TIGR02100       435 GRRPWASINFVTAHDGFTLRDLVSYNEKHNEANGENNRDGHNDNYSWNCGVEGPTDDPAINALRRRQQRNLLATLLLSQG  514 (688)
T ss_pred             CCCcCEEEEEEeCCCCchHHHHHHhhccchhhccccccccccccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence            66788999999999999999999999999999999999999999999999999888877777888899999999999999


Q ss_pred             ceeeecccccccccCCCCCCCCCCCCCCCcccccccccchhHHHHHHHHHHHHhcccCCCCcCCCCC-------Ccceee
Q 011993          314 TPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNI-------NDVTWH  386 (473)
Q Consensus       314 ~P~iy~G~E~g~~~~~~~~~~~~~~~r~~~~W~~~~~~~~~l~~~~~~L~~lR~~~p~l~~g~~~~~-------~~~~~~  386 (473)
                      +||||||||+|+++.++.++|++++.++.|+|+.... ..++++|||+||+|||+||+|+.+.+...       ..+.|.
T Consensus       515 iP~i~~GdE~g~t~~G~~n~y~~~~~~~~~dW~~~~~-~~~l~~~~k~Li~lRk~~~~l~~~~~~~~~~~~~~~~~v~~~  593 (688)
T TIGR02100       515 TPMLLAGDEFGRTQQGNNNAYCQDNEIGWVDWSLDEG-DDELLAFTKKLIALRKAHPVLRRERFFDGRNEADGLKDVTWL  593 (688)
T ss_pred             CceeeecHhhccCCCCCCCCccCCCcccccCcccccc-cHHHHHHHHHHHHHHHhCchhcccccccCCcccCCCCceEEe
Confidence            9999999999999999999999999999999996543 45899999999999999999999987643       346774


Q ss_pred             c--------cccCCCCCcEEEEEEecCC-------CCeEEEEEeCCCCcEEEECCCCCCCCCcEEEEeCCCCCCCCCCCC
Q 011993          387 E--------DNWDNYDSKFLAFTLHDNN-------GADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPE  451 (473)
Q Consensus       387 ~--------~~~~~~~~~v~a~~R~~~~-------~~~~lvv~N~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  451 (473)
                      .        ..|......+++|......       .+.++|++|.+.+.+.+.||...  ..|..++++........   
T Consensus       594 ~~~G~~~~~~~w~~~~~~~l~~~l~~~~~~~~~~~~~~~~v~~N~~~~~~~~~lP~~~--~~w~~~~dt~~~~~~~~---  668 (688)
T TIGR02100       594 NADGEPMTEEDWENPETRLLCMVLSDMDPGGDPGADDSLLLLLNAGPEPVPFKLPGGG--GRWELVLDTADEEAPGI---  668 (688)
T ss_pred             CCCCCcCChhhcCCCCCCEEEEEEeCCccCCCCCCCCeEEEEECCCCCCeEEECCCCC--CcEEEEecCCCCCCccc---
Confidence            2        3463334689999987532       14699999999999999999742  68999999964332211   


Q ss_pred             CCCCCCCeEEEcCCeEEEEEe
Q 011993          452 GAAGTGSTYNLSPYSSILLEA  472 (473)
Q Consensus       452 ~~~~~~~~i~l~p~~~~vl~~  472 (473)
                       ....+..+.|+|++++||..
T Consensus       669 -~~~~~~~~~v~~~s~~vl~~  688 (688)
T TIGR02100       669 -HLDAGQEAELPARSVLLLRR  688 (688)
T ss_pred             -cccCCCEEEEcCCEEEEEeC
Confidence             12235689999999999863

This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
>PRK03705 glycogen debranching enzyme; Provisional Back     alignment and domain information
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase Back     alignment and domain information
>PRK10785 maltodextrin glucosidase; Provisional Back     alignment and domain information
>PRK10933 trehalose-6-phosphate hydrolase; Provisional Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>TIGR02456 treS_nterm trehalose synthase Back     alignment and domain information
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK09505 malS alpha-amylase; Reviewed Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK09441 cytoplasmic alpha-amylase; Reviewed Back     alignment and domain information
>PLN02877 alpha-amylase/limit dextrinase Back     alignment and domain information
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>TIGR03852 sucrose_gtfA sucrose phosphorylase Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>PLN02447 1,4-alpha-glucan-branching enzyme Back     alignment and domain information
>PRK13840 sucrose phosphorylase; Provisional Back     alignment and domain information
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03244 alpha-amylase; Provisional Back     alignment and domain information
>PLN00196 alpha-amylase; Provisional Back     alignment and domain information
>PLN02361 alpha-amylase Back     alignment and domain information
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 Back     alignment and domain information
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type Back     alignment and domain information
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02784 alpha-amylase Back     alignment and domain information
>TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase Back     alignment and domain information
>PRK14511 maltooligosyl trehalose synthase; Provisional Back     alignment and domain information
>KOG2212 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00642 Aamy Alpha-amylase domain Back     alignment and domain information
>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional Back     alignment and domain information
>PF14872 GHL5: Hypothetical glycoside hydrolase 5 Back     alignment and domain information
>COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01531 glyc_debranch glycogen debranching enzymye Back     alignment and domain information
>PF11941 DUF3459: Domain of unknown function (DUF3459); InterPro: IPR022567 This functionally uncharacterised domain is found in bacteria Back     alignment and domain information
>PF02806 Alpha-amylase_C: Alpha amylase, C-terminal all-beta domain; InterPro: IPR006048 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>PF11852 DUF3372: Domain of unknown function (DUF3372); InterPro: IPR024561 This entry represents the uncharacterised C-terminal domain of secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants Back     alignment and domain information
>PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF14701 hDGE_amylase: glucanotransferase domain of human glycogen debranching enzyme Back     alignment and domain information
>PF10438 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal domain; InterPro: IPR019492 This domain is at the very C terminus of cyclo-malto-dextrinase proteins and consists of 8 beta strands, is largely globular and appears to help stabilise the active sites created by upstream domains, IPR015171 from INTERPRO, and IPR006047 from INTERPRO Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF08533 Glyco_hydro_42C: Beta-galactosidase C-terminal domain; InterPro: IPR013739 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>smart00632 Aamy_C Aamy_C domain Back     alignment and domain information
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional Back     alignment and domain information
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>PLN02635 disproportionating enzyme Back     alignment and domain information
>PRK14508 4-alpha-glucanotransferase; Provisional Back     alignment and domain information
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A Back     alignment and domain information
>PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins Back     alignment and domain information
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>PRK11052 malQ 4-alpha-glucanotransferase; Provisional Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>TIGR00217 malQ 4-alpha-glucanotransferase Back     alignment and domain information
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information
>COG3589 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) Back     alignment and domain information
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type Back     alignment and domain information
>COG1640 MalQ 4-alpha-glucanotransferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea Back     alignment and domain information
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02446 Glyco_hydro_77: 4-alpha-glucanotransferase; InterPro: IPR003385 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin Back     alignment and domain information
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides Back     alignment and domain information
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex) Back     alignment and domain information
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin Back     alignment and domain information
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins Back     alignment and domain information
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination Back     alignment and domain information
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3 Back     alignment and domain information
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides Back     alignment and domain information
>COG2342 Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02929 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) and histamine dehydrogenase (HD) FMN-binding domain Back     alignment and domain information
>PF00724 Oxidored_FMN: NADH:flavin oxidoreductase / NADH oxidase family; InterPro: IPR001155 The TIM-barrel fold is a closed barrel structure composed of an eight-fold repeat of beta-alpha units, where the eight parallel beta strands on the inside are covered by the eight alpha helices on the outside [] Back     alignment and domain information
>PLN02411 12-oxophytodienoate reductase Back     alignment and domain information
>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd04747 OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 5 Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02877 GH18_hevamine_XipI_class_III This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query473
2vnc_A718 Crystal Structure Of Glycogen Debranching Enzyme Tr 1e-91
2wsk_A657 Crystal Structure Of Glycogen Debranching Enzyme Gl 4e-66
1bf2_A750 Structure Of Pseudomonas Isoamylase Length = 750 6e-60
2wan_A921 Pullulanase From Bacillus Acidopullulyticus Length 1e-31
2e8y_A718 Crystal Structure Of Pullulanase Type I From Bacill 3e-25
2ya0_A714 Catalytic Module Of The Multi-Modular Glycogen-Degr 2e-21
2ya1_A1014 Product Complex Of A Multi-Modular Glycogen-Degradi 2e-21
2ya2_A708 Catalytic Module Of The Multi-Modular Glycogen-Degr 2e-21
3faw_A 877 Crystal Structure Of The Group B Streptococcus Pull 5e-16
2y4s_A884 Barley Limit Dextrinase In Complex With Beta-Cyclod 3e-15
2fhb_A1083 Crystal Structure Analysis Of Klebsiella Pneumoniae 5e-13
2fgz_A926 Crystal Structure Analysis Of Apo Pullulanase From 5e-13
2fh6_A920 Crystal Structure Analysis Of Klebsiella Pneumoniae 6e-13
2fh8_A922 Crystal Structure Analysis Of Klebsiella Pneumoniae 6e-13
3m07_A618 1.4 Angstrom Resolution Crystal Structure Of Putati 8e-07
3amk_A702 Structure Of The Starch Branching Enzyme I (Bei) Fr 4e-06
3aml_A755 Structure Of The Starch Branching Enzyme I (Bei) Fr 5e-06
1eha_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 8e-06
3vgg_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 8e-06
1eh9_A558 Crystal Structure Of Sulfolobus Solfataricus Glycos 8e-06
1ea9_C583 Cyclomaltodextrinase Length = 583 2e-05
3k1d_A722 Crystal Structure Of Glycogen Branching Enzyme Syno 2e-05
3vgd_A558 Ctystal Structure Of Glycosyltrehalose Trehalohydro 2e-05
3vge_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 4e-05
3dhu_A449 Crystal Structure Of An Alpha-Amylase From Lactobac 3e-04
1sma_A588 Crystal Structure Of A Maltogenic Amylase Length = 3e-04
1gvi_A588 Thermus Maltogenic Amylase In Complex With Beta-Cd 3e-04
1jda_A429 Maltotetraose-Forming Exo-Amylase Length = 429 3e-04
2bhy_A602 Crystal Structure Of Deinococcus Radiodurans Maltoo 3e-04
2bhu_A602 Crystal Structure Of Deinococcus Radiodurans Maltoo 4e-04
2amg_A418 Structure Of Hydrolase (Glycosidase) Length = 418 4e-04
1qi5_A429 Mutant (D294n) Maltotetraose-Forming Exo-Amylase In 4e-04
1gcy_A527 High Resolution Crystal Structure Of Maltotetraose- 4e-04
1qi4_A429 Mutant (e219g) Maltotetraose-forming Exo-amylase In 4e-04
1lwh_A441 Crystal Structure Of T. Maritima 4-Alpha-Glucanotra 5e-04
>pdb|2VNC|A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus Length = 718 Back     alignment and structure 
Iteration: 1

 Score =  333 bits (855), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 198/475 (41%), Positives = 273/475 (57%), Gaps = 48/475 (10%)
Query: 13  MVNTWGYSTINFFSPMSRYAAGG--GGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNE 70
           + N WGY  INFFSP  RY++ G  GG + +   FK+MV  LH AGIEVI+DVVYNHT E
Sbjct: 238 LTNYWGYDPINFFSPECRYSSTGCLGGQVLS---FKKMVNELHNAGIEVIIDVVYNHTAE 294
Query: 71  ADDANPYTTSFRGIDNKVYYMV--DGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVV 128
            +   P T SFRGIDN  YYM+  D     L++ G GNTLN +HP V++++LDSLR+WV 
Sbjct: 295 GNHLGP-TLSFRGIDNTAYYMLQPDNKRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVT 353
Query: 129 EYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDC-RGLYLVGK 187
           E HVDGFRFDLA+ L R      +     I A+ +D ILS+ K+IAEPWD  +G Y VG 
Sbjct: 354 EMHVDGFRFDLAAALARELYSVNMLNTFFI-ALQQDPILSQVKLIAEPWDVGQGGYQVGN 412
Query: 188 FPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAH 247
           FP   +WAEWNGKYRD +R+F +G+      +A R+ GS D+Y  N + P+ SIN++ +H
Sbjct: 413 FPY--QWAEWNGKYRDSIRRFWRGEALPYSEIANRLLGSPDIYLGNNKTPFASINYVTSH 470
Query: 248 DGFTLYDLVSYNYKHXXXXXXXXXXXXXXXFSWNCGFEGETDDASIKALRSRQMKNFHLA 307
           DGFTL DLVSYN KH               +SWNCG EG T+D ++   R +Q +NF + 
Sbjct: 471 DGFTLEDLVSYNQKHNEANGFNNQDGMNENYSWNCGAEGPTNDQNVVICREKQKRNFMIT 530
Query: 308 LMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQ 367
           L+VSQGTPM+L GDE   T+ GNNN++  D  I  F W  L+ +K+    F  ++I+F +
Sbjct: 531 LLVSQGTPMILGGDELSRTQRGNNNAFCQDNEITWFDW-NLDERKSKFLEFVKKMIQFYR 589
Query: 368 SRRVFGREDFLN--------INDVTWH--------EDNWDNYDSKFLAFTLHDNNGADI- 410
           +   F RE +          + DVT++        E  W +  ++ + F L  +   +I 
Sbjct: 590 AHPAFRRERYFQGKKLFGMPLKDVTFYTLEGREVDEKTWSS-PTQLVIFVLEGSVMDEIN 648
Query: 411 -----------YLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLES--PDDIVPEG 452
                       +  NA+   VKV      PK +W  V+ + L    P++ + EG
Sbjct: 649 MYGERIADDSFLIILNANPNNVKVKF----PKGKWELVISSYLREIKPEERIIEG 699
>pdb|2WSK|A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Glgx From Escherichia Coli K-12 Length = 657 Back     alignment and structure
>pdb|1BF2|A Chain A, Structure Of Pseudomonas Isoamylase Length = 750 Back     alignment and structure
>pdb|2WAN|A Chain A, Pullulanase From Bacillus Acidopullulyticus Length = 921 Back     alignment and structure
>pdb|2E8Y|A Chain A, Crystal Structure Of Pullulanase Type I From Bacillus Subtilis Str. 168 Length = 718 Back     alignment and structure
>pdb|2YA0|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 714 Back     alignment and structure
>pdb|2YA1|A Chain A, Product Complex Of A Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 1014 Back     alignment and structure
>pdb|2YA2|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua In Complex With An Inhibitor Length = 708 Back     alignment and structure
>pdb|3FAW|A Chain A, Crystal Structure Of The Group B Streptococcus Pullulanase Sap Length = 877 Back     alignment and structure
>pdb|2Y4S|A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin Length = 884 Back     alignment and structure
>pdb|2FHB|A Chain A, Crystal Structure Analysis Of Klebsiella Pneumoniae Pullulanase Complexed With Maltose Length = 1083 Back     alignment and structure
>pdb|3M07|A Chain A, 1.4 Angstrom Resolution Crystal Structure Of Putative Alpha Amylase From Salmonella Typhimurium Length = 618 Back     alignment and structure
>pdb|3AMK|A Chain A, Structure Of The Starch Branching Enzyme I (Bei) From Oryza Sativa L Length = 702 Back     alignment and structure
>pdb|3AML|A Chain A, Structure Of The Starch Branching Enzyme I (Bei) From Oryza Sativa L Length = 755 Back     alignment and structure
>pdb|1EHA|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase From Sulfolobus Solfataricus Length = 558 Back     alignment and structure
>pdb|3VGG|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase (E283q) Complexed With Maltoheptaose Length = 558 Back     alignment and structure
>pdb|1EH9|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Glycosyltrehalose Trehalohydrolase Length = 558 Back     alignment and structure
>pdb|1EA9|C Chain C, Cyclomaltodextrinase Length = 583 Back     alignment and structure
>pdb|3K1D|A Chain A, Crystal Structure Of Glycogen Branching Enzyme Synonym: 1,4- Glucan:1,4-Alpha-D-Glucan 6-Glucosyl-Transferase From Mycob Tuberculosis H37rv Length = 722 Back     alignment and structure
>pdb|3VGD|A Chain A, Ctystal Structure Of Glycosyltrehalose Trehalohydrolase (D252e) Length = 558 Back     alignment and structure
>pdb|3VGE|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase (D252s) Length = 558 Back     alignment and structure
>pdb|3DHU|A Chain A, Crystal Structure Of An Alpha-Amylase From Lactobacillus Plantarum Length = 449 Back     alignment and structure
>pdb|1SMA|A Chain A, Crystal Structure Of A Maltogenic Amylase Length = 588 Back     alignment and structure
>pdb|1GVI|A Chain A, Thermus Maltogenic Amylase In Complex With Beta-Cd Length = 588 Back     alignment and structure
>pdb|1JDA|A Chain A, Maltotetraose-Forming Exo-Amylase Length = 429 Back     alignment and structure
>pdb|2BHY|A Chain A, Crystal Structure Of Deinococcus Radiodurans Maltooligosyltrehalose Trehalohydrolase In Complex With Trehalose Length = 602 Back     alignment and structure
>pdb|2BHU|A Chain A, Crystal Structure Of Deinococcus Radiodurans Maltooligosyltrehalose Trehalohydrolase Length = 602 Back     alignment and structure
>pdb|2AMG|A Chain A, Structure Of Hydrolase (Glycosidase) Length = 418 Back     alignment and structure
>pdb|1QI5|A Chain A, Mutant (D294n) Maltotetraose-Forming Exo-Amylase In Complex With Maltotetraose Length = 429 Back     alignment and structure
>pdb|1GCY|A Chain A, High Resolution Crystal Structure Of Maltotetraose-Forming Exo-Amylase Length = 527 Back     alignment and structure
>pdb|1QI4|A Chain A, Mutant (e219g) Maltotetraose-forming Exo-amylase In Complex With Maltotetraose Length = 429 Back     alignment and structure
>pdb|1LWH|A Chain A, Crystal Structure Of T. Maritima 4-Alpha-Glucanotransferase Length = 441 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query473
2wsk_A657 Glycogen debranching enzyme; carbohydrate metaboli 0.0
2vr5_A718 Glycogen operon protein GLGX; hydrolase, glycosida 0.0
1bf2_A750 Isoamylase; hydrolase, glycosidase, debranching en 0.0
2ya0_A714 Putative alkaline amylopullulanase; hydrolase, gly 1e-175
3faw_A877 Reticulocyte binding protein; TIM barrel, beta bar 1e-169
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 1e-166
2ya1_A1014 Putative alkaline amylopullulanase; hydrolase, gly 1e-165
4aio_A884 Limit dextrinase; hydrolase, pullulanase, glycosid 1e-163
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 1e-155
2fhf_A1083 Pullulanase; multiple domain, beta-alpha-barrel, a 1e-137
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 1e-16
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 8e-16
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 1e-15
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 8e-14
3aml_A755 OS06G0726400 protein; starch-branching, transferas 3e-13
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 1e-12
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 2e-12
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 2e-12
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 3e-12
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 3e-12
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 4e-12
1gcy_A527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 8e-12
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 9e-12
1ht6_A405 AMY1, alpha-amylase isozyme 1; barley, beta-alpha- 1e-11
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 3e-11
1cyg_A 680 Cyclodextrin glucanotransferase; glycosyltransfera 3e-11
1d3c_A 686 Cyclodextrin glycosyltransferase; alpha-amylase, p 4e-11
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 5e-11
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 6e-11
1qho_A 686 Alpha-amylase; glycoside hydrolase, starch degrada 6e-11
3bmv_A 683 Cyclomaltodextrin glucanotransferase; glycosidase, 1e-10
3bc9_A599 AMYB, alpha amylase, catalytic region; acarbose, t 1e-09
1mxg_A435 Alpha amylase; hyperthermostable, family 13 glycos 6e-09
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 1e-08
1ud2_A480 Amylase, alpha-amylase; calcium-free, alkaline, hy 3e-08
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 6e-08
1r7a_A504 Sucrose phosphorylase; beta-alpha-barrels, dimer, 7e-08
1hvx_A515 Alpha-amylase; hydrolase, glycosyltransferase, the 9e-08
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 1e-07
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 2e-07
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 3e-07
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 3e-07
1jae_A471 Alpha-amylase; glycosidase, carbohydrate metabolis 5e-06
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 6e-06
1hx0_A496 Alpha amylase (PPA); inhibitor, carbohydrate, panc 9e-06
1g94_A448 Alpha-amylase; beta-alpha-8-barrel, 3 domain struc 1e-05
3aie_A844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 2e-05
1lwj_A441 4-alpha-glucanotransferase; alpha-amylase family, 3e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
1wza_A488 Alpha-amylase A; hydrolase, halophilic, thermophil 2e-04
3czg_A644 Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 2e-04
1g5a_A628 Amylosucrase; glycosyltransferase, glycoside hydro 4e-04
3ucq_A655 Amylosucrase; thermostability, amylose synthesis, 7e-04
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} Length = 657 Back     alignment and structure
 Score =  662 bits (1711), Expect = 0.0
 Identities = 172/477 (36%), Positives = 233/477 (48%), Gaps = 39/477 (8%)

Query: 6   RRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVY 65
            R  R  + N WGY+ +  F+    YA      L    EF++ +KALH AGIEVILD+V 
Sbjct: 208 PRLQRMGLSNYWGYNPVAMFALHPAYACSPETALD---EFRDAIKALHKAGIEVILDIVL 264

Query: 66  NHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRH 125
           NH+ E D   P   S RGIDN+ YY +   G   N+ GCGNTLN +HP V++     LR+
Sbjct: 265 NHSAELDLDGP-LFSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRY 323

Query: 126 WVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDC-RGLYL 184
           WV   HVDGFRFDLA+V+ R  +       PL  AI    +LS+ K+IAEPWD   G Y 
Sbjct: 324 WVETCHVDGFRFDLAAVMGRTPEFRQD--APLFTAIQNCPVLSQVKLIAEPWDIAPGGYQ 381

Query: 185 VGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFI 244
           VG FP    +AEWN  +RD  R+F        G  A R + SSD+++ N R P  +IN +
Sbjct: 382 VGNFP--PLFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLV 439

Query: 245 IAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNF 304
            AHDGFTL D V +N+KHNEANGE   DG N+N+S N G EG      +   R   +   
Sbjct: 440 TAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHAL 499

Query: 305 HLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIK 364
              L++SQGTPM+L GDE+GH+++GNNN+Y  D  +    W Q  +       F + +I 
Sbjct: 500 LTTLLLSQGTPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASS---GLTAFTAALIH 556

Query: 365 FRQSRRVFGREDFL--NINDVTW--------HEDNWDNYDSKFLAFTLHDNNGADIYLAF 414
            R+         +      +V W          D W N   K L   L D       +A 
Sbjct: 557 LRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQN-GPKQLQILLSD----RFLIAI 611

Query: 415 NAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLE 471
           NA     ++ LP       W  +             E      + +    +   + +
Sbjct: 612 NATLEVTEIVLPAGE----WHAIPPFA--------GEDNPVITAVWQGPAHGLCVFQ 656
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Length = 718 Back     alignment and structure
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 750 Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Length = 714 Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Length = 877 Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Length = 718 Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Length = 1014 Back     alignment and structure
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A Length = 884 Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Length = 921 Back     alignment and structure
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* Length = 1083 Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Length = 558 Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Length = 618 Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Length = 602 Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 583 Back     alignment and structure
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Length = 755 Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Length = 488 Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Length = 475 Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Length = 449 Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Length = 585 Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Length = 588 Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Length = 696 Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Length = 527 Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Length = 601 Back     alignment and structure
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Length = 405 Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Length = 478 Back     alignment and structure
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Length = 680 Back     alignment and structure
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Length = 686 Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Length = 422 Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Length = 484 Back     alignment and structure
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* Length = 686 Back     alignment and structure
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Length = 683 Back     alignment and structure
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A Length = 599 Back     alignment and structure
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Length = 435 Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Length = 695 Back     alignment and structure
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Length = 480 Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Length = 722 Back     alignment and structure
>1r7a_A Sucrose phosphorylase; beta-alpha-barrels, dimer, glycoside hydrolase, transferase; 1.77A {Bifidobacterium adolescentis} SCOP: b.71.1.1 c.1.8.1 PDB: 2gdv_A* 2gdu_A* Length = 504 Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Length = 515 Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Length = 617 Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Length = 424 Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Length = 483 Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Length = 637 Back     alignment and structure
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* Length = 471 Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Length = 485 Back     alignment and structure
>1hx0_A Alpha amylase (PPA); inhibitor, carbohydrate, pancreas, hydrolase; HET: GLC AC1 BGC MAL; 1.38A {Sus scrofa} SCOP: b.71.1.1 c.1.8.1 PDB: 1wo2_A* 1ua3_A* 1kxq_A 1kxt_A 1kxv_A 1jfh_A* 1vah_A* 1ppi_A* 3l2m_A* 3l2l_A* 1dhk_A* 1ose_A* 1pig_A* 1pif_A* 1bvn_P 3oli_A* 3old_A* 3olg_A* 3ole_A* 3ij8_A* ... Length = 496 Back     alignment and structure
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Length = 448 Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Length = 844 Back     alignment and structure
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* Length = 441 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 Length = 488 Back     alignment and structure
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A Length = 644 Back     alignment and structure
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Length = 628 Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Length = 655 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query473
2vr5_A718 Glycogen operon protein GLGX; hydrolase, glycosida 100.0
1bf2_A750 Isoamylase; hydrolase, glycosidase, debranching en 100.0
2wsk_A657 Glycogen debranching enzyme; carbohydrate metaboli 100.0
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 100.0
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 100.0
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 100.0
1wza_A488 Alpha-amylase A; hydrolase, halophilic, thermophil 100.0
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 100.0
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 100.0
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 100.0
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 100.0
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 100.0
4aie_A549 Glucan 1,6-alpha-glucosidase; hydrolase, glycoside 100.0
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 100.0
1uok_A558 Oligo-1,6-glucosidase; sugar degradation, hydrolas 100.0
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 100.0
3k8k_A669 Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet 100.0
1zja_A557 Trehalulose synthase; sucrose isomerase, alpha-amy 100.0
1m53_A570 Isomaltulose synthase; klebsiella SP. LX3, sucrose 100.0
4aef_A645 Neopullulanase (alpha-amylase II); hydrolase, ther 100.0
3aj7_A589 Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro 100.0
2zic_A543 Dextran glucosidase; TIM barrel, (beta/alpha)8-bar 100.0
1lwj_A441 4-alpha-glucanotransferase; alpha-amylase family, 100.0
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 100.0
2ze0_A555 Alpha-glucosidase; TIM barrel, glucoside hydrolase 100.0
1g5a_A628 Amylosucrase; glycosyltransferase, glycoside hydro 100.0
3czg_A644 Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 100.0
3faw_A877 Reticulocyte binding protein; TIM barrel, beta bar 100.0
2ya0_A714 Putative alkaline amylopullulanase; hydrolase, gly 100.0
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 100.0
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 100.0
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 100.0
2fhf_A1083 Pullulanase; multiple domain, beta-alpha-barrel, a 100.0
3ucq_A655 Amylosucrase; thermostability, amylose synthesis, 100.0
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 100.0
1cyg_A 680 Cyclodextrin glucanotransferase; glycosyltransfera 100.0
2ya1_A1014 Putative alkaline amylopullulanase; hydrolase, gly 100.0
1qho_A 686 Alpha-amylase; glycoside hydrolase, starch degrada 100.0
1d3c_A 686 Cyclodextrin glycosyltransferase; alpha-amylase, p 100.0
3bmv_A 683 Cyclomaltodextrin glucanotransferase; glycosidase, 100.0
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 100.0
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 100.0
1gjw_A637 Maltodextrin glycosyltransferase; alpha-amylase, m 100.0
3aml_A755 OS06G0726400 protein; starch-branching, transferas 100.0
1ud2_A480 Amylase, alpha-amylase; calcium-free, alkaline, hy 100.0
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 100.0
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 100.0
4aio_A884 Limit dextrinase; hydrolase, pullulanase, glycosid 100.0
1g94_A448 Alpha-amylase; beta-alpha-8-barrel, 3 domain struc 100.0
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 100.0
1hvx_A515 Alpha-amylase; hydrolase, glycosyltransferase, the 100.0
1jae_A471 Alpha-amylase; glycosidase, carbohydrate metabolis 100.0
1r7a_A504 Sucrose phosphorylase; beta-alpha-barrels, dimer, 100.0
1ht6_A405 AMY1, alpha-amylase isozyme 1; barley, beta-alpha- 100.0
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 100.0
1mxg_A435 Alpha amylase; hyperthermostable, family 13 glycos 100.0
1gcy_A527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 100.0
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 100.0
3bc9_A599 AMYB, alpha amylase, catalytic region; acarbose, t 100.0
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 100.0
4gqr_A496 Pancreatic alpha-amylase; glycosyl hydrolase, diab 100.0
1iv8_A 720 Maltooligosyl trehalose synthase; beta alpha barre 100.0
3aie_A 844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 99.94
3klk_A 1039 Glucansucrase; native form, open conformation, mul 99.9
3hje_A 704 704AA long hypothetical glycosyltransferase; treha 99.89
3ttq_A 1108 Dextransucrase; (beta/alpha)8 barrel, transferase; 99.47
3aie_A844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 99.42
3klk_A1039 Glucansucrase; native form, open conformation, mul 99.33
3ttq_A1108 Dextransucrase; (beta/alpha)8 barrel, transferase; 99.31
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 98.72
3hje_A704 704AA long hypothetical glycosyltransferase; treha 98.3
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 98.16
4fnq_A729 Alpha-galactosidase AGAB; glycoside hydrolase, hyd 97.91
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 97.83
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 97.58
2f2h_A773 Putative family 31 glucosidase YICI; BETA8alpha8 b 97.04
2g3m_A693 Maltase, alpha-glucosidase; hydrolase, glycoside h 96.72
3lpp_A898 Sucrase-isomaltase; glycoside hydrolase family 31, 96.47
4ba0_A817 Alpha-glucosidase, putative, ADG31B; hydrolase; HE 96.38
3l4y_A875 Maltase-glucoamylase, intestinal; glycoside hydrol 95.86
1x1n_A524 4-alpha-glucanotransferase; disproportionating enz 95.81
3nsx_A666 Alpha-glucosidase; structural genomics, PSI-2, pro 95.76
3vmn_A643 Dextranase; TIM barrel, immunoglobrin fold, greek- 95.68
1esw_A500 Amylomaltase; (beta,alpha)8-barrel, glucanotransfe 95.41
1tz7_A505 4-alpha-glucanotransferase; (beta, alpha)8- barrel 94.78
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 94.54
1szn_A417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 94.42
1x7f_A385 Outer surface protein; structural genomics, unknow 94.26
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 93.94
4axn_A328 Chitinase C1; hydrolase; 1.68A {Serratia marcescen 93.66
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 93.49
2p0o_A372 Hypothetical protein DUF871; structural genomics, 93.46
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 92.81
3fnd_A312 Chitinase; TIM-barrel, structural genomics, PSI-2, 92.74
3top_A 908 Maltase-glucoamylase, intestinal; membrane, hydrol 92.52
2xvl_A 1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 92.5
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 91.3
2ebn_A289 Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl 90.94
3poh_A451 Endo-beta-N-acetylglucosaminidase F1; TIM barrel, 90.76
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 90.72
1eok_A290 Endo-beta-N-acetylglucosaminidase F3; alpha/beta-b 90.7
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 90.18
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 89.89
3ian_A321 Chitinase; structural genomics, hydrolase, glycosi 89.42
2aam_A309 Hypothetical protein TM1410; structural genomics, 89.26
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 89.21
1edt_A271 Endo-beta-N-acetylglucosaminidase H, endo H; hydro 88.85
3tty_A675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 88.04
2ki0_A36 DS119; beta-alpha-beta, de novo protein; NMR {Synt 87.88
1cnv_A299 Concanavalin B; plant chitinase, chitin binding pr 87.86
4ac1_X283 Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, g 87.79
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 87.29
2y8v_A290 CHIC, class III chitinase, putative; afchic, hydro 87.03
2hvm_A273 Hevamine; hydrolase, chitinase/lysozyme; 1.80A {He 86.47
2zxd_A455 Alpha-L-fucosidase, putative; TIM barrel, hydrolas 86.18
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 85.13
2xtk_A310 CHIA1, class III chitinase CHIA1; hydrolase, GH18; 84.82
2uy2_A294 Endochitinase; carbohydrate metabolism, polysaccha 84.61
3cz8_A319 Putative sporulation-specific glycosylase YDHD; st 84.56
1jak_A512 Beta-N-acetylhexosaminidase; glycoside hydrolase, 83.13
2gsj_A271 Protein PPL-2; mimosoideae, chimerolectin, endochi 83.11
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 81.52
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Back     alignment and structure
Probab=100.00  E-value=3.1e-67  Score=562.03  Aligned_cols=457  Identities=43%  Similarity=0.738  Sum_probs=375.2

Q ss_pred             CCccccCCCC----CCCCCCcCCCCCcccCCCCCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEEecccccCCCCCCC
Q 011993            1 MEFQRRRNPR----DHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANP   76 (473)
Q Consensus         1 ~~~~~~~~~~----~~~~~~~GY~~~d~~~vdp~~Gt~~~~~~~~~edl~~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~   76 (473)
                      ||+++++..+    .+..+||||+++||++|||+|||++ .+.++++||++||++||++||+||||+|+||++.   +++
T Consensus       222 ~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~yGt~~-~~~~~~~dfk~lv~~~H~~Gi~VilDvV~NH~~~---~~~  297 (718)
T 2vr5_A          222 MPVFHFIDQRFLTDKGLTNYWGYDPINFFSPECRYSSTG-CLGGQVLSFKKMVNELHNAGIEVIIDVVYNHTAE---GNH  297 (718)
T ss_dssp             CCCBCBCCCHHHHTTTCCCSSCCCBSCSSSBCGGGCSSC-TTTHHHHHHHHHHHHHHTTTCEEEEEECCSCCSS---CST
T ss_pred             eCCEecCccccccccCCcCccCcCcccCcccChhhcCCC-CCCchHHHHHHHHHHHHHCCCEEEEEeccCcccC---ccc
Confidence            7888888743    2456789999999999999999964 3446689999999999999999999999999998   666


Q ss_pred             ccc--cccCCCCccceeecCCC--CcccccCCcCCCCCCCHHHHHHHHHHHHHHHHhcCccEEEEecccccccCCCCCCC
Q 011993           77 YTT--SFRGIDNKVYYMVDGTG--QLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPL  152 (473)
Q Consensus        77 ~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~dln~~np~V~~~i~~~~~~w~~~~giDGfR~Daa~~l~~~~~~~~~  152 (473)
                      |..  .+.+.+++.||.+.+.+  .+.++++|+++||+.||+|+++|++++++|++++||||||||+|+++.+++. .+.
T Consensus       298 ~~~~~~~~~~~~~~yy~~~~~~~~~~~~~~~~~~~ln~~~p~v~~~i~d~l~~W~~e~gvDGfR~D~~~~l~~~~~-~~~  376 (718)
T 2vr5_A          298 LGPTLSFRGIDNTAYYMLQPDNKRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMHVDGFRFDLAAALARELY-SVN  376 (718)
T ss_dssp             TSCCSSHHHHHSTTTBCBCTTTSSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTTCCCEEEETTGGGGGBSSS-SBC
T ss_pred             cCccccccCCCCCcceEeCCCCCceeecCCCccCeecCCCHHHHHHHHHHHHHHHHHcCCCEEEEcchhhhhhccC-Ccc
Confidence            642  23444567888875433  5778889999999999999999999999999889999999999999988762 345


Q ss_pred             CCHHHHHHHHhccccCCceEEecCCCCc-cccccCCCCCcchhhhhhhHHHHHHHHHHcCCCCcHHHHHHHhcCCccccc
Q 011993          153 NAPPLIRAIAKDAILSRCKIIAEPWDCR-GLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYR  231 (473)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~li~E~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~  231 (473)
                      ...+++++++.+...|++++|||.|... ..+..++|+.  .++.||+.+++.++.|+.++......++..+......|.
T Consensus       377 ~~~~~~~~i~~~~~~~~~~liaE~w~~~~~~~~~~~f~~--~~~~wn~~~r~~~~~f~~g~~~~~~~~~~~l~~~~~~y~  454 (718)
T 2vr5_A          377 MLNTFFIALQQDPILSQVKLIAEPWDVGQGGYQVGNFPY--QWAEWNGKYRDSIRRFWRGEALPYSEIANRLLGSPDIYL  454 (718)
T ss_dssp             TTCHHHHHHHHCTTGGGSEEEECCBCSSTTCBCTTCSCT--TEEEECHHHHHHHHHHHHTCCEEHHHHHHHHTTCHHHHG
T ss_pred             chHHHHHHHHhCcccCCcEEEecccccCCCcccccCCch--hHHHHhHHHHHHHHHHHcCCcchHHHHHHHHhcchhhhc
Confidence            5678899998877789999999999866 3455566652  346899999999999999988888889988888777776


Q ss_pred             ccCCCCCcceeEEEecCCCceeeeeeccccccccCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 011993          232 VNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVS  311 (473)
Q Consensus       232 ~~~~~~~~~~~f~~nHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~l~~  311 (473)
                      .....|..++||++|||+.++.+++.+..+++.++|+...+|...+.+|+|+..|..+.+.....+.+++|++++++|++
T Consensus       455 ~~~~~p~~~vnf~~~HD~~~l~dl~~~~~k~~~~~g~~~~dg~~~n~sw~~~~~g~~~~~~~~~~~~~~~r~a~a~ll~~  534 (718)
T 2vr5_A          455 GNNKTPFASINYVTSHDGFTLEDLVSYNQKHNEANGFNNQDGMNENYSWNCGAEGPTNDQNVVICREKQKRNFMITLLVS  534 (718)
T ss_dssp             GGTCCGGGEEECSCCSSSCCHHHHSSCSSCCCGGGSSTTCCSCSCCCCCCSSSSSSCCCHHHHHHHHHHHHHHHHHHTTS
T ss_pred             ccCCCcceeeeeeecCCCCCHHHHHHHhhhhhhhcccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            55556778999999999999999999999999999988888999999999999998877766666778899999999999


Q ss_pred             cCceeeecccccccccCCCCCCCCCCCCCCCcccccccccchhHHHHHHHHHHHHhcccCCCCcCCCCC--------Ccc
Q 011993          312 QGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNI--------NDV  383 (473)
Q Consensus       312 pG~P~iy~G~E~g~~~~~~~~~~~~~~~r~~~~W~~~~~~~~~l~~~~~~L~~lR~~~p~l~~g~~~~~--------~~~  383 (473)
                      ||+||||||||+|+++.++.+.|+++..+++|+|+... ...++++|||+||+||+++|+|+.+.+...        ..+
T Consensus       535 ~G~P~iy~GdE~G~~~~G~~~~y~~~~~~~~~~W~~~~-~~~~l~~~~~~Li~lRk~~pal~~~~~~~~~~~~~~~~~~~  613 (718)
T 2vr5_A          535 QGTPMILGGDELSRTQRGNNNAFCQDNEITWFDWNLDE-RKSKFLEFVKKMIQFYRAHPAFRRERYFQGKKLFGMPLKDV  613 (718)
T ss_dssp             SSEEEEETTTTTTCCCTTCSCCTTCCSTTTSCCCCCCH-HHHHHHHHHHHHHHHHHHCGGGSCSSCCCSSBCTTCSSBSE
T ss_pred             CCCcEEEechhhcccCCCCCCcccCCccccccCccccc-cchHHHHHHHHHHHHHhhCcccccCcccccccccccCCCce
Confidence            99999999999999988888889999899999999754 346899999999999999999999887531        235


Q ss_pred             eeec--------cccCCCCCcEEEEEEecC-------C-----CCeEEEEEeCCCCcEEEECCCCCCCCCcEEEEeCCCC
Q 011993          384 TWHE--------DNWDNYDSKFLAFTLHDN-------N-----GADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLE  443 (473)
Q Consensus       384 ~~~~--------~~~~~~~~~v~a~~R~~~-------~-----~~~~lvv~N~~~~~~~~~l~~~~~~~~~~~~~~~~~~  443 (473)
                      .|+.        .+| ..++++++|.|...       +     ++.++||+|++.+++.+.||....+..|..++++...
T Consensus       614 ~~~~~~g~~~~~~~~-~~~~~~la~~r~~~~~~~~~~~~~~~~~~~ilv~~N~~~~~~~~~lp~~~~g~~w~~l~~t~~~  692 (718)
T 2vr5_A          614 TFYTLEGREVDEKTW-SSPTQLVIFVLEGSVMDEINMYGERIADDSFLIILNANPNNVKVKFPKGKWELVISSYLREIKP  692 (718)
T ss_dssp             EEECSSSCBCCTTTT-TSEESEEEEEEEGGGCCCBCTTSCBCCCCEEEEEEECCSSCEEEECCSSEEEEEEESCCSCCCT
T ss_pred             EEECCCCCcCCcccc-CCCCCEEEEEEeCCccccccccccccCCCeEEEEECCCCCcEEEECCCCCCCCeEEEEecCCCC
Confidence            5532        123 22368999999852       1     4689999999999999999875333478888877533


Q ss_pred             CCCCCCCCCCCCCCCeEEEcCCeEEEEEe
Q 011993          444 SPDDIVPEGAAGTGSTYNLSPYSSILLEA  472 (473)
Q Consensus       444 ~~~~~~~~~~~~~~~~i~l~p~~~~vl~~  472 (473)
                      ..      .....+..++|+|++++||+.
T Consensus       693 ~~------~~~~~~~~~~l~~~s~~vl~~  715 (718)
T 2vr5_A          693 EE------RIIEGEKELEIEGRTALVYRR  715 (718)
T ss_dssp             TS------SCCCTTCEEEECSSEEEEEEE
T ss_pred             cc------ccccCCCeEEECCcEEEEEEe
Confidence            21      112345689999999999974
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Back     alignment and structure
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Back     alignment and structure
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Back     alignment and structure
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* Back     alignment and structure
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* Back     alignment and structure
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} Back     alignment and structure
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* Back     alignment and structure
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* Back     alignment and structure
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} Back     alignment and structure
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Back     alignment and structure
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Back     alignment and structure
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Back     alignment and structure
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* Back     alignment and structure
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Back     alignment and structure
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Back     alignment and structure
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* Back     alignment and structure
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Back     alignment and structure
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A Back     alignment and structure
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* Back     alignment and structure
>1r7a_A Sucrose phosphorylase; beta-alpha-barrels, dimer, glycoside hydrolase, transferase; 1.77A {Bifidobacterium adolescentis} SCOP: b.71.1.1 c.1.8.1 PDB: 2gdv_A* 2gdu_A* Back     alignment and structure
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Back     alignment and structure
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Back     alignment and structure
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Back     alignment and structure
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... Back     alignment and structure
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Back     alignment and structure
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A Back     alignment and structure
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} Back     alignment and structure
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Back     alignment and structure
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A Back     alignment and structure
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Back     alignment and structure
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Back     alignment and structure
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Back     alignment and structure
>1x1n_A 4-alpha-glucanotransferase; disproportionating enzyme, amylomaltase, D-enzyme; 1.80A {Solanum tuberosum} SCOP: c.1.8.1 Back     alignment and structure
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Back     alignment and structure
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A* Back     alignment and structure
>1esw_A Amylomaltase; (beta,alpha)8-barrel, glucanotransferase, alpha-amylase FAMI acarbose, transferase; HET: ACR; 1.90A {Thermus aquaticus} SCOP: c.1.8.1 PDB: 1cwy_A* 1fp8_A 1fp9_A 2owc_A* 2oww_A* 2owx_A* 2x1i_A* Back     alignment and structure
>1tz7_A 4-alpha-glucanotransferase; (beta, alpha)8- barrel; 2.15A {Aquifex aeolicus} SCOP: c.1.8.1 Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Back     alignment and structure
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Back     alignment and structure
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12 Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Back     alignment and structure
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis} Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Back     alignment and structure
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Back     alignment and structure
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Back     alignment and structure
>1eok_A Endo-beta-N-acetylglucosaminidase F3; alpha/beta-barrel, hydrolase; 1.80A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 PDB: 1eom_A* Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} Back     alignment and structure
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15 Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic} Back     alignment and structure
>1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5 Back     alignment and structure
>4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina} Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Back     alignment and structure
>2hvm_A Hevamine; hydrolase, chitinase/lysozyme; 1.80A {Hevea brasiliensis} SCOP: c.1.8.5 PDB: 1hvq_A* 1llo_A 1kr0_A* 1kr1_A* 1kqy_A* 1kqz_A* Back     alignment and structure
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>2xtk_A CHIA1, class III chitinase CHIA1; hydrolase, GH18; HET: AZM; 2.00A {Aspergillus fumigatus} PDB: 2xuc_A 2xvp_A 2xvn_A* Back     alignment and structure
>2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation, glycopr chitin-binding, chitin degradation, CAZY, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A* 2uy4_A* 2uy5_A* Back     alignment and structure
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Back     alignment and structure
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A* Back     alignment and structure
>2gsj_A Protein PPL-2; mimosoideae, chimerolectin, endochitinase, glycosyl hydrolase family 18, equilibrium sedimentation, X-RAY; 1.73A {Parkia platycephala} Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 473
d1bf2a3475 c.1.8.1 (A:163-637) Isoamylase, central domain {Ps 2e-65
d2fhfa5563 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella p 3e-51
d1gjwa2572 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga 1e-31
d1m7xa3396 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enz 4e-29
d1jaea2378 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mea 2e-27
d1g5aa2554 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysacc 1e-23
d1hx0a2403 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus s 2e-23
d1eh9a3400 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrol 4e-22
d1bf2a2113 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amylo 1e-19
d1g94a2354 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoa 3e-18
d1m53a2478 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Kle 5e-18
d1uoka2479 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus 5e-16
d1mxga2361 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeo 2e-15
d1gcya2357 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan m 4e-15
d2bhua3420 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydro 8e-15
d1j0ha3382 c.1.8.1 (A:124-505) Neopullulanase, central domain 2e-14
d1wzla3382 c.1.8.1 (A:121-502) Maltogenic amylase, central do 2e-13
d1ht6a2347 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hor 7e-13
d1wzaa2409 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Haloth 4e-12
d1iv8a2653 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase 4e-12
d1ji1a3432 c.1.8.1 (A:123-554) Maltogenic amylase, central do 6e-12
d1r7aa2434 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobac 8e-12
d1h3ga3422 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central d 1e-10
d1ud2a2390 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillu 2e-10
d1ua7a2344 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillu 4e-09
d1lwha2391 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Ther 7e-09
d1ea9c3382 c.1.8.1 (C:122-503) Maltogenic amylase, central do 8e-09
d1e43a2393 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera 1e-08
d2guya2381 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill 2e-08
d2aaaa2381 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill 8e-08
d2d3na2394 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillu 2e-07
d1qhoa4407 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase 3e-07
d3bmva4406 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase 8e-07
d1hvxa2393 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillu 6e-06
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 475 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Isoamylase, central domain
species: Pseudomonas amyloderamosa [TaxId: 32043]

 Score =  216 bits (549), Expect = 2e-65
 Identities = 139/409 (33%), Positives = 184/409 (44%), Gaps = 47/409 (11%)

Query: 7   RNPRDHMVNTWGYSTINFFSPMSRYAAGG--GGPLKASWEFKEMVKALHGAGIEVILDVV 64
               D   N WGY T N+FSP  RYA     GGP     EF+ MV+A H AGI+V +DVV
Sbjct: 76  VPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTA---EFQAMVQAFHNAGIKVYMDVV 132

Query: 65  YNHT------NEADDANPYTTSFRGIDNKVYYM-VDGTGQLLNYAGCGNTLNCNHPVVME 117
           YNHT        +D       S+RG+DN  YY    G     +  G G   N  + V   
Sbjct: 133 YNHTAEGGTWTSSDPTTATIYSWRGLDNATYYELTSGNQYFYDNTGIGANFNTYNTVAQN 192

Query: 118 LILDSLRHWVVEYHVDGFRFDLASVLCRGTDGS-----------------------PLNA 154
           LI+DSL +W     VDGFRFDLASVL                               +N 
Sbjct: 193 LIVDSLAYWANTMGVDGFRFDLASVLGNSCLNGAYTASAPNCPNGGYNFDAADSNVAINR 252

Query: 155 PPLIRAIAKDAILSRCKIIAEPWDCR-GLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDP 213
                 +   A  S   + AEPW      Y +G FP    W+EWNG +RD LR+      
Sbjct: 253 ILREFTVRPAAGGSGLDLFAEPWAIGGNSYQLGGFPQ--GWSEWNGLFRDSLRQAQNELG 310

Query: 214 GMK---GILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGG 270
            M       A   SGSS+L++ + R P++SINFI  HDG TL D+ S N  +N      G
Sbjct: 311 SMTIYVTQDANDFSGSSNLFQSSGRSPWNSINFIDVHDGMTLKDVYSCNGANNSQAWPYG 370

Query: 271 N--DGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRY 328
               G + N+SW+ G    T  A     + R  +      M+S GTP+M  GDEY  T  
Sbjct: 371 PSDGGTSTNYSWDQGMSAGTGAA---VDQRRAARTGMAFEMLSAGTPLMQGGDEYLRTLQ 427

Query: 329 GNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDF 377
            NNN+Y  D++ N   +    T +++ Y F   +I FR++        +
Sbjct: 428 CNNNAYNLDSSANWLTY-SWTTDQSNFYTFAQRLIAFRKAHPALRPSSW 475
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 563 Back     information, alignment and structure
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Length = 572 Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Length = 396 Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Length = 378 Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Length = 554 Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Length = 403 Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Length = 400 Back     information, alignment and structure
>d1bf2a2 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 113 Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Length = 354 Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Length = 478 Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Length = 479 Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Length = 361 Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Length = 357 Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Length = 420 Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Length = 382 Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Length = 382 Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Length = 347 Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Length = 409 Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 653 Back     information, alignment and structure
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Length = 432 Back     information, alignment and structure
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Length = 434 Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Length = 422 Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Length = 390 Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Length = 344 Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Length = 391 Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Length = 382 Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Length = 393 Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Length = 381 Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Length = 381 Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Length = 394 Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Length = 407 Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Length = 406 Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Length = 393 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query473
d1bf2a3475 Isoamylase, central domain {Pseudomonas amyloderam 100.0
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 100.0
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 100.0
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 100.0
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 100.0
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 100.0
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 100.0
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 100.0
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 100.0
d1qhoa4407 Cyclodextrin glycosyltransferase {Bacillus stearot 100.0
d3bmva4406 Cyclodextrin glycosyltransferase {Thermoanaerobact 100.0
d2fhfa5563 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 100.0
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 100.0
d1g5aa2554 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 100.0
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 100.0
d1m53a2478 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 100.0
d1uoka2479 Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 100.0
d1ji1a3432 Maltogenic amylase, central domain {Thermoactinomy 100.0
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 100.0
d1m7xa3396 1,4-alpha-glucan branching enzyme, central domain 100.0
d1ua7a2344 Bacterial alpha-amylase {Bacillus subtilis [TaxId: 100.0
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 100.0
d1g94a2354 Bacterial alpha-amylase {Pseudoalteromonas halopla 100.0
d1e43a2393 Bacterial alpha-amylase {Chimera (Bacillus amyloli 100.0
d1jaea2378 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 100.0
d1hvxa2393 Bacterial alpha-amylase {Bacillus stearothermophil 100.0
d2d3na2394 Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 100.0
d1mxga2361 Bacterial alpha-amylase {Archaeon Pyrococcus woese 100.0
d1hx0a2403 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 100.0
d1gjwa2572 Maltosyltransferase {Thermotoga maritima [TaxId: 2 100.0
d1ud2a2390 Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta 100.0
d1r7aa2434 Sucrose phosphorylase {Bifidobacterium adolescenti 100.0
d1iv8a2 653 Maltooligosyl trehalose synthase {Archaeon Sulfolo 99.85
d1uoka179 Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 139 99.14
d1j0ha283 Neopullulanase {Bacillus stearothermophilus [TaxId 99.08
d1m53a178 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 99.01
d1ea9c280 Maltogenic amylase {Bacillus sp., cyclomaltodextri 98.92
d1wzla283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 98.88
d1m7xa2106 1,4-alpha-glucan branching enzyme {Escherichia col 98.85
d1g5aa174 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 98.61
d1ji1a283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 98.58
d1bf2a2113 Isoamylase {Pseudomonas amyloderamosa [TaxId: 3204 98.02
d1h3ga283 Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId 97.82
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 97.61
d1g94a194 Bacterial alpha-Amylase {Pseudoalteromonas halopla 97.6
d2f2ha4338 Putative glucosidase YicI, domain 2 {Escherichia c 97.57
d3bmva389 Cyclodextrin glycosyltransferase {Thermoanaerobact 96.97
d1ua7a178 Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 96.9
d1cxla390 Cyclodextrin glycosyltransferase {Bacillus circula 96.79
d1cyga389 Cyclodextrin glycosyltransferase {Bacillus stearot 96.6
d1hx0a193 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 96.59
d1wzaa179 Bacterial alpha-Amylase {Halothermothrix orenii [T 96.57
d1x1na1523 Amylomaltase MalQ {Potato (Solanum tuberosum) [Tax 96.55
d1tz7a1485 Amylomaltase MalQ {Aquifex aeolicus [TaxId: 63363] 96.32
d2fhfa5563 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 96.26
d1jaea193 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 95.99
d1x7fa2244 Outer surface protein, N-terminal domain {Bacillus 95.89
d1eswa_500 Amylomaltase MalQ {Thermus aquaticus [TaxId: 271]} 95.67
d1edta_265 Endo-beta-N-acetylglucosaminidase {Streptomyces pl 94.12
d2ebna_285 Endo-beta-N-acetylglucosaminidase {Flavobacterium 93.74
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 93.25
d2fhfa4118 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 92.73
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 92.7
d1iv8a2653 Maltooligosyl trehalose synthase {Archaeon Sulfolo 92.65
d2hvma_273 Hevamine A (chitinase/lysozyme) {Para rubber tree 92.08
d2aama1285 Hypothetical protein TM1410 {Thermotoga maritima [ 92.06
d1eoka_282 Endo-beta-N-acetylglucosaminidase {Flavobacterium 90.61
d1e43a190 Bacterial alpha-Amylase {Bacillus licheniformis [T 89.95
d1q45a_380 12-oxophytodienoate reductase (OPR, OYE homolog) { 89.07
d1hl9a2350 Putative alpha-L-fucosidase, catalytic domain {The 88.81
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 88.59
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 88.32
d2d3na187 Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 88.31
d1nofa1106 Glycosyl hydrolase family 5 xylanase {Erwinia chry 88.08
d1ud2a190 Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [Ta 87.95
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 87.78
d1uasa189 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 87.76
d1cnva_283 Seed storage protein {Jack bean (Canavalia ensifor 87.71
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 86.93
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 86.89
d1gwja_374 Morphinone reductase {Pseudomonas putida [TaxId: 3 86.89
d1vyra_363 Pentaerythritol tetranirate reductase {Enterobacte 86.3
d1jaka1356 beta-N-acetylhexosaminidase {Streptomyces plicatus 85.38
d1djqa1340 Trimethylamine dehydrogenase, N-terminal domain {M 85.24
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 85.12
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 85.03
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 84.9
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 84.21
d1kwga154 A4 beta-galactosidase {Thermus thermophilus [TaxId 82.98
d1icpa_364 12-oxophytodienoate reductase (OPR, OYE homolog) { 82.63
d1qbaa3443 Bacterial chitobiase (beta-N-acetylhexosaminidase) 81.96
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Isoamylase, central domain
species: Pseudomonas amyloderamosa [TaxId: 32043]

Probab=100.00  E-value=8.8e-49  Score=401.95  Aligned_cols=358  Identities=36%  Similarity=0.570  Sum_probs=259.6

Q ss_pred             CCccccCCCC-------CCCCCCcCCCCCcccCCCCCC-------CCCCCCCCchHHHHHHHHHHHHHCCCEEEEEEecc
Q 011993            1 MEFQRRRNPR-------DHMVNTWGYSTINFFSPMSRY-------AAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYN   66 (473)
Q Consensus         1 ~~~~~~~~~~-------~~~~~~~GY~~~d~~~vdp~~-------Gt~~~~~~~~~edl~~lv~~aH~~Gi~VilD~V~N   66 (473)
                      ||++++++..       .+..+||||+++||++|||+|       ||        .+||++||++||++||+||||+|+|
T Consensus        63 ~Pi~~~~~~~~~~~~~~~~~~~y~GY~~~d~~~vdp~y~~~~~~~Gt--------~~d~~~LV~~aH~~GIrVilD~V~N  134 (475)
T d1bf2a3          63 LPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGP--------TAEFQAMVQAFHNAGIKVYMDVVYN  134 (475)
T ss_dssp             SCCBCBSCTTTTSSTTCCTTCCCSCCCBSCSSCBCGGGCSCCSTTHH--------HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred             CCCCcCCCcccccccccccCcCCCCCCcccCCCcCcccccCCCCCCC--------HHHHHHHHHHHHhcCcEEEEEeccc
Confidence            6888887643       345679999999999999999       77        5999999999999999999999999


Q ss_pred             cccCCCCCCCccccccCCCCccceee------------cCCCCcccccCCcCCCCCCCHHHHHHHHHHHHHHHHhcCccE
Q 011993           67 HTNEADDANPYTTSFRGIDNKVYYMV------------DGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDG  134 (473)
Q Consensus        67 H~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~dln~~np~V~~~i~~~~~~w~~~~giDG  134 (473)
                      ||+.   +|+|+......  ..||.+            .+......+..++++||+.||+|++++++++++|++++||||
T Consensus       135 H~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~np~V~~~~~~~~~~w~~~~gvDG  209 (475)
T d1bf2a3         135 HTAE---GGTWTSSDPTT--ATIYSWRGLDNATYYELTSGNQYFYDNTGIGANFNTYNTVAQNLIVDSLAYWANTMGVDG  209 (475)
T ss_dssp             SCTT---CSBSSSSCSSC--BBCSSHHHHHHHHHBCBCTTSSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTSCCCE
T ss_pred             cccC---CCcccccCCCc--CccccccCcccccccccCCCccccccCCCccCccchhhhHHHHHHHHHHHhhhhhcCCce
Confidence            9999   99999654322  222222            122333456677899999999999999999999998899999


Q ss_pred             EEEecccccccCCCCC------------------CCCCH---HHHHHHHh--ccccCCceEEecCCCCc-cccccCCCCC
Q 011993          135 FRFDLASVLCRGTDGS------------------PLNAP---PLIRAIAK--DAILSRCKIIAEPWDCR-GLYLVGKFPN  190 (473)
Q Consensus       135 fR~Daa~~l~~~~~~~------------------~~~~~---~~~~~~~~--~~~~~~~~li~E~~~~~-~~~~~~~~~~  190 (473)
                      ||+|+++++.+++...                  +....   +.++++..  ....+.+.+++|.|... .....+.++.
T Consensus       210 fR~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  289 (475)
T d1bf2a3         210 FRFDLASVLGNSCLNGAYTASAPNCPNGGYNFDAADSNVAINRILREFTVRPAAGGSGLDLFAEPWAIGGNSYQLGGFPQ  289 (475)
T ss_dssp             EEETTGGGGGBCCSSSSCCTTSTTCTTCSCCBCTTCTTSHHHHHHHHSCBCCTTCCSSBEEEECCCCSSTTCCCTTCSCT
T ss_pred             EEEehHhhhchhhhccchhccCccCcccccchhhhhhhhhhhhhhhhhhhhhhcccccccccccccccccccccccCCcc
Confidence            9999999997654210                  01111   12222222  24567778899988766 3333344432


Q ss_pred             cchhhhhhhHHHHHHHHHHcCC---CCcHHHHHHHhcCCcccccccCCCCCcceeEEEecCCCceeeeeeccccccccCC
Q 011993          191 WDRWAEWNGKYRDDLRKFIKGD---PGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANG  267 (473)
Q Consensus       191 ~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~f~~nHD~~~~~~~~~~~~~~~~~~~  267 (473)
                        .+..|+..+.+.++.+....   ..........+......+......+...++|+++||..++.+++.....+.....
T Consensus       290 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hd~~~~~d~~~~~~~~~~~~~  367 (475)
T d1bf2a3         290 --GWSEWNGLFRDSLRQAQNELGSMTIYVTQDANDFSGSSNLFQSSGRSPWNSINFIDVHDGMTLKDVYSCNGANNSQAW  367 (475)
T ss_dssp             --TCEEECHHHHHHHHHHHHCBTTBCCCHHHHHHHHTTCHHHHGGGTCCGGGEEECSCCSSSCCHHHHTTCSSCCCCCCT
T ss_pred             --chHHhcchhHHHHHHHhcccccchhhHhhhhhhcccchhhhhccCcCHHHHHhHHHhcchhhHHHHhhhhhhhhHhhc
Confidence              23556677777777665432   2334445556666666666666777788999999999988877765555554443


Q ss_pred             C--CCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCceeeecccccccccCCCCCCCCCCCCCCCccc
Q 011993          268 E--GGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQW  345 (473)
Q Consensus       268 ~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~l~~pG~P~iy~G~E~g~~~~~~~~~~~~~~~r~~~~W  345 (473)
                      .  ....+.....+|+++..+.....   ..+.++++++++++|++||+|+||||||+|++..++.++|+.+..++.++|
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~r~~~~~llt~pGiP~iyyGdE~g~~~~g~~~~y~~~~~~~~~~~  444 (475)
T d1bf2a3         368 PYGPSDGGTSTNYSWDQGMSAGTGAA---VDQRRAARTGMAFEMLSAGTPLMQGGDEYLRTLQCNNNAYNLDSSANWLTY  444 (475)
T ss_dssp             TSCCCCCCCSCCCCCCTTTTTTSCCH---HHHHHHHHHHHHHHHHSSSEEEEETTGGGTCCCTTCSCCTTCCSTTTSCCC
T ss_pred             cccccCCCcccccccccCccCCcchh---HHHHHHHHHHHHHHHHhccchheecCHhhCccCCCCcccccCCCccCccCC
Confidence            2  22334445567776655543322   233677889999999999999999999999988888888887777777888


Q ss_pred             ccccccchhHHHHHHHHHHHHhcccCCCCcCC
Q 011993          346 GQLETKKNSHYRFFSEVIKFRQSRRVFGREDF  377 (473)
Q Consensus       346 ~~~~~~~~~l~~~~~~L~~lR~~~p~l~~g~~  377 (473)
                      ...+. ..+++++||+|++||++||+|+.|++
T Consensus       445 ~~~~~-~~~l~~~~~~Li~lR~~~paLr~~~~  475 (475)
T d1bf2a3         445 SWTTD-QSNFYTFAQRLIAFRKAHPALRPSSW  475 (475)
T ss_dssp             CCCHH-HHHHHHHHHHHHHHHHHCGGGSCSSC
T ss_pred             Cccch-hHHHHHHHHHHHHHHhcChhhCCCCC
Confidence            66443 45899999999999999999999864
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1uoka1 b.71.1.1 (A:480-558) Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1j0ha2 b.71.1.1 (A:506-588) Neopullulanase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1m53a1 b.71.1.1 (A:521-598) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1ea9c2 b.71.1.1 (C:504-583) Maltogenic amylase {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1wzla2 b.71.1.1 (A:503-585) Maltogenic amylase {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1m7xa2 b.71.1.1 (A:623-728) 1,4-alpha-glucan branching enzyme {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1g5aa1 b.71.1.1 (A:555-628) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1ji1a2 b.71.1.1 (A:555-637) Maltogenic amylase {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1bf2a2 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d1h3ga2 b.71.1.1 (A:518-600) Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1g94a1 b.71.1.1 (A:355-448) Bacterial alpha-Amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3bmva3 b.71.1.1 (A:407-495) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d1ua7a1 b.71.1.1 (A:348-425) Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1cxla3 b.71.1.1 (A:407-496) Cyclodextrin glycosyltransferase {Bacillus circulans, different strains [TaxId: 1397]} Back     information, alignment and structure
>d1cyga3 b.71.1.1 (A:403-491) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1hx0a1 b.71.1.1 (A:404-496) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1wzaa1 b.71.1.1 (A:437-515) Bacterial alpha-Amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1x1na1 c.1.8.1 (A:2-524) Amylomaltase MalQ {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
>d1tz7a1 c.1.8.1 (A:1-485) Amylomaltase MalQ {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1jaea1 b.71.1.1 (A:379-471) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1eswa_ c.1.8.1 (A:) Amylomaltase MalQ {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fhfa4 b.71.1.1 (A:966-1083) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} Back     information, alignment and structure
>d2aama1 c.1.8.15 (A:28-312) Hypothetical protein TM1410 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Back     information, alignment and structure
>d1e43a1 b.71.1.1 (A:394-483) Bacterial alpha-Amylase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1q45a_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]} Back     information, alignment and structure
>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d2d3na1 b.71.1.1 (A:399-485) Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1nofa1 b.71.1.2 (A:31-43,A:321-413) Glycosyl hydrolase family 5 xylanase {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1ud2a1 b.71.1.1 (A:391-480) Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1gwja_ c.1.4.1 (A:) Morphinone reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1vyra_ c.1.4.1 (A:) Pentaerythritol tetranirate reductase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} Back     information, alignment and structure
>d1djqa1 c.1.4.1 (A:1-340) Trimethylamine dehydrogenase, N-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1kwga1 b.71.1.1 (A:591-644) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1icpa_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]} Back     information, alignment and structure
>d1qbaa3 c.1.8.6 (A:338-780) Bacterial chitobiase (beta-N-acetylhexosaminidase) {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure