Citrus Sinensis ID: 012077

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-

MIERCLGAQRSRKFHRALRQCKVTALCLVLTVVVLRGIIGAGEFGTPEKDFYEIRNRLYFPSRKRGGDPHRVLEERRTTSSSFATHDRNHNKNNYDEFNVKMFMEDNGEDDEKPDPNEPYSRGPKISNWDAQRAQWLNENPDFANFINKKPRVLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDDAGKKLTKELKDRPAFEADDQSAMVYSLATERDKWGDKVYLESEYYLHVNWAILVDRYEEMIEKYRPGLGDHRWPLVTHFVGCKPCAKFGDNLAERCLRQMDRAFTFGDNQILRTYGFTHKSLASGRVKRVRNETRNPLEVKDKVRLLSPPYKAVKNFKPVQSQARTMDTV

cHHHHHccHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccccccccEEEEccccccccccccHHHccHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHcccccccEEEEcccccccccHHHHHHHHHHHHHHccccccccccccEEEcccccccccccccHHHHHHHHHHHHHcccHHHHHHHHccccccccccccEEccccccccccccccccccccccccccccccccccccccccc

cHHHHcccHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHccHcHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccEEEEEEccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEcHHcccHccHHHHHHHHHHHHHHHccccEEEEEEcccEEEEcccccccHHHccccccEEccccHHEEEccccccccccEEEEEccHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccHHHcccEEEcccHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEcccccccccccHHHcccccccHcEcccccccHHHccccccc

mierclgaQRSRKFHRALRQCKVTALCLVLTVVVLRGIigagefgtpekdfYEIRNrlyfpsrkrggdphrvleerrttsssfathdrnhnknnydefNVKMFmedngeddekpdpnepysrgpkisnwDAQRAQWLnenpdfanfinkkprvllvtgsspkacenpvgdhYLLKSIKNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRnlllghpeveflwwmdsdamftdmtfevpwerykdynlvmHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILdawapmgpkgkvrdDAGKKLTKElkdrpafeaddqsAMVYSLATErdkwgdkvYLESEYYLHVNWAILVDRYEEMIEKYrpglgdhrwplvthfvgckpcakfgdNLAERCLRQMDRaftfgdnqilrtygfthkslasGRVKRVrnetrnplevkdkvrllsppykavknfkpvqsqartmdtv

mierclgaqrsrkfhralrqckvtaLCLVLTVVVLRGIigagefgtpekdfyeirnrlyfpsrkrggdphrvleerrttsssfathdrnhnknnydeFNVKMFMEDNGEDDEKPDPNEPYSRGPKISNWDAQRAQWLNENPDFANFINKKPRVLLVTGsspkacenpvgDHYLLKSIKNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDDAGKKLTKElkdrpafeaddqsamVYSLATERDKWGDKVYLESEYYLHVNWAILVDRYEEMIEKYRPGLGDHRWPLVTHFVGCKPCAKFGDNLAERCLRQMDRAFTFGDNQILRTYgfthkslasgrvkrvrnetrnplevkdkvrllsppykavknfkpvqsqartmdtv

MIERCLGAQRSRKFHRALRQCKvtalclvltvvvlRGIIGAGEFGTPEKDFYEIRNRLYFPSRKRGGDPHRVLEERRTTSSSFATHDRNHNKNNYDEFNVKMFMEDNGEDDEKPDPNEPYSRGPKISNWDAQRAQWLNENPDFANFINKKPRVLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDDAGKKLTKELKDRPAFEADDQSAMVYSLATERDKWGDKVYLESEYYLHVNWAILVDRYEEMIEKYRPGLGDHRWPLVTHFVGCKPCAKFGDNLAERCLRQMDRAFTFGDNQILRTYGFTHKSLASGRVKRVRNETRNPLEVKDKVRLLSPPYKAVKNFKPVQSQARTMDTV

************KFHRALRQCKVTALCLVLTVVVLRGIIGAGEFGTPEKDFYEIRNRLYF********************************************************************WDAQRAQWLNENPDFANFINKKPRVLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPM*******************************MVYSLATERDKWGDKVYLESEYYLHVNWAILVDRYEEMIEKYRPGLGDHRWPLVTHFVGCKPCAKFGDNLAERCLRQMDRAFTFGDNQILRTYGFTHKSLA***********************************************

**************HRALRQCKVTALCLVLTVVVLRGIIGAGEFGTPE**FYE************************************************************PDPNEPYSRGPKISNWDAQRAQW****************VLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDDAGKKLTKELKDRPAFEADDQSAMVYSLATERDKWGDKVYLESEYYLHVNWAILVDRYEEMIEKYRPGLGDHRWPLVTHFVGCKPCAKFGDNLAERCLRQMDRAFTFGDNQILRTYGFTHKSLASGRVKRVRNETRNPLEVKDKVRLL***********************

MIERCLGAQRSRKFHRALRQCKVTALCLVLTVVVLRGIIGAGEFGTPEKDFYEIRNRLYFPSRKRGGDPHRVLEERRTTSSSFATHDRNHNKNNYDEFNVKMFMEDN**************RGPKISNWDAQRAQWLNENPDFANFINKKPRVLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDDAGKKLTKELKDRPAFEADDQSAMVYSLATERDKWGDKVYLESEYYLHVNWAILVDRYEEMIEKYRPGLGDHRWPLVTHFVGCKPCAKFGDNLAERCLRQMDRAFTFGDNQILRTYGFTHKSLASGRVKRVRNETRNPLEVKDKVRLLSPPYKAVKNFKP***********

MIERCLGAQRSRKFHRALRQCKVTALCLVLTVVVLRGIIGAGEFGTPEKDFYEIRNRLYFPSRKRGGDPHRVLEERRT*************************MEDNGEDDEKPDPNEPYSRGPKISNWDAQRAQWLNENPDFANFINKKPRVLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDDAGKKLTKELKDRPAFEADDQSAMVYSLATERDKWGDKVYLESEYYLHVNWAILVDRYEEMIEKYRPGLGDHRWPLVTHFVGCKPCAKFGDNLAERCLRQMDRAFTFGDNQILRTYGFTHKSLASGRVKRVRNETRNPLEVKDKVRLLSPPYKAVKNF*************

iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		471	2.2.26 [Sep-21-2011]
Q9LZJ3		460	Xyloglucan 6-xylosyltrans	yes	no	0.959	0.982	0.727	0.0
O22775		461	Putative glycosyltransfer	no	no	0.959	0.980	0.747	0.0
Q9CA75		457	Putative glycosyltransfer	no	no	0.874	0.901	0.536	1e-144
Q9LF80		457	Putative glycosyltransfer	no	no	0.889	0.916	0.517	1e-143
Q9M9U0		513	Putative glycosyltransfer	no	no	0.698	0.641	0.632	1e-137
Q564G7		435	Galactomannan galactosylt	N/A	no	0.662	0.717	0.427	6e-80
O81007		449	Putative glycosyltransfer	no	no	0.653	0.685	0.407	1e-76
Q9SZG1		432	Glycosyltransferase 6 OS=	no	no	0.649	0.708	0.402	5e-75
O94622		375	Uncharacterized alpha-1,2	yes	no	0.460	0.578	0.222	1e-06

>sp\|Q9LZJ3\|XT1_ARATH Xyloglucan 6-xylosyltransferase OS=Arabidopsis thaliana GN=XT1 PE=1 SV=1	Back alignment and function desciption

 Score =  697 bits (1800), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/458 (72%), Positives = 381/458 (83%), Gaps = 6/458 (1%)

Query: 1   MIERCLGAQRSRKFHRALRQCKVTALCLVLTVVVLRGIIGAGEFGTPEKDFYEIRNRLYF 60
           MIE+C+GA R R+  R +RQ KVT LCLVLTV+VLRG IGAG+FGTPEKD  EIR   ++
Sbjct: 1   MIEKCIGAHRFRRLQRFMRQGKVTILCLVLTVIVLRGTIGAGKFGTPEKDIEEIREHFFY 60

Query: 61  PSRKRGGDPHRVLEERRTTSSSFATHDRNHNKNNYDEFNV-KMFMEDNGEDDEKPDPNEP 119
            +RKRG +PHRVL E   +S + ++ D  +  N+Y+ F++ K+F+++  E+  +   N+P
Sbjct: 61  -TRKRG-EPHRVLVE--VSSKTTSSEDGGNGGNSYETFDINKLFVDEGDEEKSRDRTNKP 116

Query: 120 YSRGPKISNWDAQRAQWLNENPDFANFIN-KKPRVLLVTGSSPKACENPVGDHYLLKSIK 178
           YS GPKIS+WD QR  WL +NP F NF+   KPRVLLVTGS+PK CENPVGDHYLLKSIK
Sbjct: 117 YSLGPKISDWDEQRRDWLKQNPSFPNFVAPNKPRVLLVTGSAPKPCENPVGDHYLLKSIK 176

Query: 179 NKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMT 238
           NKIDYCR+HG+EIFY+ ALLDAEMAGFWAKLPLIR LLL HPE+EFLWWMDSDAMFTDM 
Sbjct: 177 NKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEIEFLWWMDSDAMFTDMV 236

Query: 239 FEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKV 298
           FE+PWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRN QWSLD+LDAWAPMGPKGK+
Sbjct: 237 FELPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNSQWSLDLLDAWAPMGPKGKI 296

Query: 299 RDDAGKKLTKELKDRPAFEADDQSAMVYSLATERDKWGDKVYLESEYYLHVNWAILVDRY 358
           R++AGK LT+ELKDRPAFEADDQSAMVY LATER+KWG KVYLES YYLH  W ILVDRY
Sbjct: 297 REEAGKVLTRELKDRPAFEADDQSAMVYLLATEREKWGGKVYLESGYYLHGYWGILVDRY 356

Query: 359 EEMIEKYRPGLGDHRWPLVTHFVGCKPCAKFGDNLAERCLRQMDRAFTFGDNQILRTYGF 418
           EEMIE ++PG GDHRWPLVTHFVGCKPC KFGD   ERCLRQMDRAF FGDNQIL+ YGF
Sbjct: 357 EEMIENHKPGFGDHRWPLVTHFVGCKPCGKFGDYPVERCLRQMDRAFNFGDNQILQMYGF 416

Query: 419 THKSLASGRVKRVRNETRNPLEVKDKVRLLSPPYKAVK 456
           THKSL S RVK  RN+T  PL+ KD+  LL PP+KA K
Sbjct: 417 THKSLGSRRVKPTRNQTDRPLDAKDEFGLLHPPFKAAK 454

Transfer one xylose mainly to the second glucose residue from the non-reducing end. The acceptor should have a minimum of four glucose residues.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 3EC: 9

>sp\|O22775\|GT2_ARATH Putative glycosyltransferase 2 OS=Arabidopsis thaliana GN=GT2 PE=2 SV=1	Back alignment and function description

>sp\|Q9CA75\|GT5_ARATH Putative glycosyltransferase 5 OS=Arabidopsis thaliana GN=GT5 PE=2 SV=1	Back alignment and function description

>sp\|Q9LF80\|GT3_ARATH Putative glycosyltransferase 3 OS=Arabidopsis thaliana GN=GT3 PE=2 SV=1	Back alignment and function description

>sp\|Q9M9U0\|GT4_ARATH Putative glycosyltransferase 4 OS=Arabidopsis thaliana GN=GT4 PE=2 SV=1	Back alignment and function description

>sp\|Q564G7\|GMGT1_CYATE Galactomannan galactosyltransferase 1 OS=Cyamopsis tetragonoloba GN=GMGT1 PE=1 SV=1	Back alignment and function description

>sp\|O81007\|GT7_ARATH Putative glycosyltransferase 7 OS=Arabidopsis thaliana GN=GT7 PE=2 SV=1	Back alignment and function description

>sp\|Q9SZG1\|GT6_ARATH Glycosyltransferase 6 OS=Arabidopsis thaliana GN=GT6 PE=2 SV=1	Back alignment and function description

>sp\|O94622\|YBKD_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C1289.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1289.13c PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		471
359479900		478	PREDICTED: putative glycosyltransferase	0.949	0.935	0.763	0.0
147774978		452	hypothetical protein VITISV_017033 [Viti	0.949	0.988	0.763	0.0
449432844		456	PREDICTED: putative glycosyltransferase	0.953	0.984	0.748	0.0
255551747		461	Xyloglucan 6-xylosyltransferase, putativ	0.961	0.982	0.736	0.0
224110550		460	predicted protein [Populus trichocarpa]	0.961	0.984	0.733	0.0
356572726		455	PREDICTED: xyloglucan 6-xylosyltransfera	0.955	0.989	0.736	0.0
225432316		450	PREDICTED: putative glycosyltransferase	0.944	0.988	0.743	0.0
147836354		450	hypothetical protein VITISV_027412 [Viti	0.944	0.988	0.746	0.0
224118952		459	predicted protein [Populus trichocarpa]	0.942	0.967	0.725	0.0
297817606		459	hypothetical protein ARALYDRAFT_907847 [	0.959	0.984	0.728	0.0

>gi\|359479900\|ref\|XP_002263821.2\| PREDICTED: putative glycosyltransferase 2 [Vitis vinifera]	Back alignment and taxonomy information

 Score =  729 bits (1882), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/457 (76%), Positives = 386/457 (84%), Gaps = 10/457 (2%)

Query: 1   MIERCLGAQRSRKFHRALRQCKVTALCLVLTVVVLRGIIGAGEFGTPEKDFYEIRNRLYF 60
           MIERCLGA+R+R+ HRALR  KVT LCLV+T+VVLRG IGAG+FGTPE+DF EIR+  +F
Sbjct: 1   MIERCLGARRARQIHRALRHFKVTILCLVMTIVVLRGTIGAGKFGTPEQDFVEIRD--HF 58

Query: 61  PSRKRGGDPHRVLEERRTTSSSFATHDRNHNKNNYDEFNVKMFMEDNGEDDEKPDPNEPY 120
             RKR  +PHRVLEE +TTSSS      +   NNY  F++   + D  +D EKPDP +PY
Sbjct: 59  SPRKRA-EPHRVLEEVQTTSSS------SSELNNYATFDLNKLLVDEEDDSEKPDPKKPY 111

Query: 121 SRGPKISNWDAQRAQWLNENPDFANFIN-KKPRVLLVTGSSPKACENPVGDHYLLKSIKN 179
           S GPKIS+WD QR+ WL +NP+F NFI   KPRVLLVTGSSPK CENPVGDHYLLKSIKN
Sbjct: 112 SLGPKISDWDEQRSTWLEQNPNFPNFIGPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKN 171

Query: 180 KIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTF 239
           KIDYCR+HG+EIFY+ ALLDAEMAGFWAKLPLIR LLL HPEVEFLWWMDSDAMFTDM F
Sbjct: 172 KIDYCRLHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAF 231

Query: 240 EVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVR 299
           E+PWERYKDYN VMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGK+R
Sbjct: 232 ELPWERYKDYNFVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKIR 291

Query: 300 DDAGKKLTKELKDRPAFEADDQSAMVYSLATERDKWGDKVYLESEYYLHVNWAILVDRYE 359
            +AGK LT+ELKDRP FEADDQSAMVY LAT++D WG KVYLES YYLH  W ILVDRYE
Sbjct: 292 TEAGKILTRELKDRPVFEADDQSAMVYLLATQKDTWGGKVYLESAYYLHGYWGILVDRYE 351

Query: 360 EMIEKYRPGLGDHRWPLVTHFVGCKPCAKFGDNLAERCLRQMDRAFTFGDNQILRTYGFT 419
           EMIE Y PGLGDHRWPLVTHFVGCKPC KFGD   ERCL+QMDRAF FGDNQ+L+ YGFT
Sbjct: 352 EMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQVLQIYGFT 411

Query: 420 HKSLASGRVKRVRNETRNPLEVKDKVRLLSPPYKAVK 456
           HKSL S RVKR RN+T NPLEVKD++ LL P +KAVK
Sbjct: 412 HKSLGSRRVKRTRNDTNNPLEVKDELGLLHPAFKAVK 448

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|147774978\|emb\|CAN59912.1\| hypothetical protein VITISV_017033 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449432844\|ref\|XP_004134208.1\| PREDICTED: putative glycosyltransferase 2-like [Cucumis sativus] gi\|449513361\|ref\|XP_004164306.1\| PREDICTED: putative glycosyltransferase 2-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|255551747\|ref\|XP_002516919.1\| Xyloglucan 6-xylosyltransferase, putative [Ricinus communis] gi\|223544007\|gb\|EEF45533.1\| Xyloglucan 6-xylosyltransferase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|224110550\|ref\|XP_002315554.1\| predicted protein [Populus trichocarpa] gi\|222864594\|gb\|EEF01725.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356572726\|ref\|XP_003554517.1\| PREDICTED: xyloglucan 6-xylosyltransferase-like [Glycine max]	Back alignment and taxonomy information

>gi\|225432316\|ref\|XP_002273887.1\| PREDICTED: putative glycosyltransferase 2 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|147836354\|emb\|CAN77730.1\| hypothetical protein VITISV_027412 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224118952\|ref\|XP_002331344.1\| predicted protein [Populus trichocarpa] gi\|222873377\|gb\|EEF10508.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|297817606\|ref\|XP_002876686.1\| hypothetical protein ARALYDRAFT_907847 [Arabidopsis lyrata subsp. lyrata] gi\|297322524\|gb\|EFH52945.1\| hypothetical protein ARALYDRAFT_907847 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		471
TAIR\|locus:2132293		461	XT2 "UDP-xylosyltransferase 2"	0.959	0.980	0.732	6.4e-186
TAIR\|locus:2081625		460	XT1 "xylosyltransferase 1" [Ar	0.959	0.982	0.703	1.8e-181
TAIR\|locus:2019090		457	XXT5 "xyloglucan xylosyltransf	0.764	0.787	0.602	6.4e-131
TAIR\|locus:2160369		457	XXT3 "xyloglucan xylosyltransf	0.802	0.827	0.578	8.1e-131
TAIR\|locus:2035030		513	XXT4 "xyloglucan xylosyltransf	0.698	0.641	0.632	8.8e-130
TAIR\|locus:2059155		449	AT2G22900 [Arabidopsis thalian	0.598	0.628	0.413	1.4e-78
TAIR\|locus:2120145		432	AT4G37690 [Arabidopsis thalian	0.547	0.597	0.430	9.6e-76
TAIR\|locus:2121798		120	AT4G38310 [Arabidopsis thalian	0.220	0.866	0.457	8e-24
POMBASE\|SPBC1289.13c		375	SPBC1289.13c "alpha-1,2-galact	0.199	0.250	0.311	8.7e-08
POMBASE\|SPAC22E12.06c		332	gmh3 "alpha-1,2-galactosyltran	0.191	0.271	0.234	0.00019

TAIR\|locus:2132293 XT2 "UDP-xylosyltransferase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1803 (639.7 bits), Expect = 6.4e-186, P = 6.4e-186
 Identities = 336/459 (73%), Positives = 374/459 (81%)

Query:     1 MIERCLGAQRSRKFHRALRQCKXXXXXXXXXXXXXRGIIGAGEFGTPEKDFYEIRNRLYF 60
             MIERCLGA R R+  RALRQ K             R  IGAG+FGTPE+D  EIR   +F
Sbjct:     1 MIERCLGAYRCRRIQRALRQLKVTILCLLLTVVVLRSTIGAGKFGTPEQDLDEIRQ--HF 58

Query:    61 PSRKRGGDPHRVLEERRT--TSSSFATHDRNHNKNNYDEFNVKMFMEDNGEDDEKPDPNE 118
              +RKRG +PHRVLEE +T   SSS      +   NNY+ F++     D GE+ EKPDPN+
Sbjct:    59 HARKRG-EPHRVLEEIQTGGDSSSGDGGGNSGGSNNYETFDINKIFVDEGEE-EKPDPNK 116

Query:   119 PYSRGPKISNWDAQRAQWLNENPDFANFIN-KKPRVLLVTGSSPKACENPVGDHYLLKSI 177
             PY+ GPKIS+WD QR+ WL +NP F NFI   KPRVLLVTGS+PK CENPVGDHYLLKSI
Sbjct:   117 PYTLGPKISDWDEQRSDWLAKNPSFPNFIGPNKPRVLLVTGSAPKPCENPVGDHYLLKSI 176

Query:   178 KNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDM 237
             KNKIDYCR+HG+EIFY+ ALLDAEMAGFWAKLPLIR LLL HPE+EFLWWMDSDAMFTDM
Sbjct:   177 KNKIDYCRLHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEIEFLWWMDSDAMFTDM 236

Query:   238 TFEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGK 297
              FE+PWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRN QW+LD+LD WAPMGPKGK
Sbjct:   237 AFELPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNNQWALDLLDTWAPMGPKGK 296

Query:   298 VRDDAGKKLTKELKDRPAFEADDQSAMVYSLATERDKWGDKVYLESEYYLHVNWAILVDR 357
             +R++AGK LT+ELKDRP FEADDQSAMVY LAT+RD WG+KVYLES YYLH  W ILVDR
Sbjct:   297 IREEAGKVLTRELKDRPVFEADDQSAMVYLLATQRDAWGNKVYLESGYYLHGYWGILVDR 356

Query:   358 YEEMIEKYRPGLGDHRWPLVTHFVGCKPCAKFGDNLAERCLRQMDRAFTFGDNQILRTYG 417
             YEEMIE Y PGLGDHRWPLVTHFVGCKPC KFGD   ERCL+QMDRAF FGDNQIL+ YG
Sbjct:   357 YEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQIYG 416

Query:   418 FTHKSLASGRVKRVRNETRNPLEVKDKVRLLSPPYKAVK 456
             FTHKSLAS +VKRVRNET NPLE+KD++ LL P +KAVK
Sbjct:   417 FTHKSLASRKVKRVRNETSNPLEMKDELGLLHPAFKAVK 455

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA;IDA

GO:0035252 "UDP-xylosyltransferase activity" evidence=IDA

GO:0009969 "xyloglucan biosynthetic process" evidence=IGI

GO:0033843 "xyloglucan 6-xylosyltransferase activity" evidence=IGI

GO:0048767 "root hair elongation" evidence=IGI;RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0005515 "protein binding" evidence=IPI

GO:0010411 "xyloglucan metabolic process" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR\|locus:2081625 XT1 "xylosyltransferase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2019090 XXT5 "xyloglucan xylosyltransferase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2160369 XXT3 "xyloglucan xylosyltransferase 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2035030 XXT4 "xyloglucan xylosyltransferase 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2059155 AT2G22900 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2120145 AT4G37690 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2121798 AT4G38310 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

POMBASE\|SPBC1289.13c SPBC1289.13c "alpha-1,2-galactosyltransferase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]	Back alignment and assigned GO terms

POMBASE\|SPAC22E12.06c gmh3 "alpha-1,2-galactosyltransferase Gmh3" [Schizosaccharomyces pombe (taxid:4896)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O22775	GT2_ARATH	2, ., 4, ., -, ., -	0.7472	0.9596	0.9804	no	no
Q9LZJ3	XT1_ARATH	2, ., 4, ., 2, ., 3, 9	0.7270	0.9596	0.9826	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.2	0.983
3rd Layer	2.4.2.39	0.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		471
PLN03182		429	PLN03182, PLN03182, xyloglucan 6-xylosyltransferas	0.0
PLN03181		453	PLN03181, PLN03181, glycosyltransferase; Provision	1e-129
pfam05637		239	pfam05637, Glyco_transf_34, galactosyl transferase	2e-79

>gnl\|CDD\|215617 PLN03182, PLN03182, xyloglucan 6-xylosyltransferase; Provisional	Back alignment and domain information

 Score =  750 bits (1939), Expect = 0.0
 Identities = 290/453 (64%), Positives = 347/453 (76%), Gaps = 24/453 (5%)

Query: 1   MIERCLGAQRSRKFHRALRQCKVTALCLVLTVVVLRGIIGAGEFGTPEKDFYEIRNRLYF 60
           M++RCLG  R R+  R L   K+T LC  +T++VLRG I  G+FGTPE+DF E+R    F
Sbjct: 1   MLQRCLGTPRGRQLQRTLNNLKITILCGFVTILVLRGTIA-GKFGTPEQDFVELRAH--F 57

Query: 61  PSRKRGGDPHRVLEERRTTSSSFATHDRNHNKNNYDEFNVKMFMEDNGEDDEKPDPNEPY 120
            S +R  +P RVL E R                           + +  ++E+ DPN PY
Sbjct: 58  LSARRIEEPSRVLAEIRFDDDLT---------------------DLDEVEEERWDPNTPY 96

Query: 121 SRGPKISNWDAQRAQWLNENPDFANFINKKPRVLLVTGSSPKACENPVGDHYLLKSIKNK 180
           + GPKIS+WD QR +WL +NP F +F+N KPRVLLVTGS PK CENPVGDHYLLKS+KNK
Sbjct: 97  TLGPKISDWDEQRRRWLRKNPGFPSFVNGKPRVLLVTGSQPKPCENPVGDHYLLKSLKNK 156

Query: 181 IDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFE 240
           IDYCR+HG+EIFY+ A LDAEMAGFWAKLPL+R L+L HPEVE++WWMDSDA+FTDMTFE
Sbjct: 157 IDYCRLHGIEIFYNMAHLDAEMAGFWAKLPLLRKLMLAHPEVEWIWWMDSDALFTDMTFE 216

Query: 241 VPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRD 300
           +P E+Y+ YNLV+HGW+E+VYDQK+WIGLNTGSFL+RNCQWSLD+LDAWAPMGPKG +RD
Sbjct: 217 IPLEKYEGYNLVIHGWDELVYDQKSWIGLNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRD 276

Query: 301 DAGKKLTKELKDRPAFEADDQSAMVYSLATERDKWGDKVYLESEYYLHVNWAILVDRYEE 360
           +AGK LT ELK RPAFEADDQSA+VY L T+R++WGDKVYLE+ YYLH  W  LVDRYEE
Sbjct: 277 EAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYYLHGYWVGLVDRYEE 336

Query: 361 MIEKYRPGLGDHRWPLVTHFVGCKPCAKFGDNLAERCLRQMDRAFTFGDNQILRTYGFTH 420
           M+EKY PGLGD RWP VTHFVGCKPC  +GD   ERCL+QM+RAF F DNQ+L  YGF H
Sbjct: 337 MMEKYHPGLGDDRWPFVTHFVGCKPCGGYGDYPVERCLKQMERAFNFADNQVLELYGFRH 396

Query: 421 KSLASGRVKRVRNETRNPLEVKDKVRLLSPPYK 453
           KSLAS  VKRVRN+T NPLE KD++ L  P +K
Sbjct: 397 KSLASAEVKRVRNDTSNPLEAKDELGLRHPAFK 429

Length = 429

>gnl\|CDD\|215616 PLN03181, PLN03181, glycosyltransferase; Provisional	Back alignment and domain information

>gnl\|CDD\|203296 pfam05637, Glyco_transf_34, galactosyl transferase GMA12/MNN10 family	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		471
PLN03182		429	xyloglucan 6-xylosyltransferase; Provisional	100.0
PLN03181		453	glycosyltransferase; Provisional	100.0
KOG4748		364	consensus Subunit of Golgi mannosyltransferase com	100.0
PF05637		239	Glyco_transf_34: galactosyl transferase GMA12/MNN1	100.0
PF03314		222	DUF273: Protein of unknown function, DUF273; Inter	99.64
KOG4748		364	consensus Subunit of Golgi mannosyltransferase com	98.61
PF03407		212	Nucleotid_trans: Nucleotide-diphospho-sugar transf	98.49
PF01501		250	Glyco_transf_8: Glycosyl transferase family 8; Int	97.31
cd06914		278	GT8_GNT1 GNT1 is a fungal enzyme that belongs to t	96.99
cd02537		240	GT8_Glycogenin Glycogenin belongs the GT 8 family	96.84
cd04194		248	GT8_A4GalT_like A4GalT_like proteins catalyze the	96.73
cd00505		246	Glyco_transf_8 Members of glycosyltransferase fami	95.39
cd06429		257	GT8_like_1 GT8_like_1 represents a subfamily of GT	95.19
PLN00176		333	galactinol synthase	95.04
PRK15171		334	lipopolysaccharide 1,3-galactosyltransferase; Prov	94.86
cd06430		304	GT8_like_2 GT8_like_2 represents a subfamily of GT	94.34
cd06431		280	GT8_LARGE_C LARGE catalytic domain has closest hom	93.42
COG1442		325	RfaJ Lipopolysaccharide biosynthesis proteins, LPS	92.46
PLN02769		629	Probable galacturonosyltransferase	90.27
PLN02718		603	Probable galacturonosyltransferase	87.78
PLN02829		639	Probable galacturonosyltransferase	86.22
PLN02742		534	Probable galacturonosyltransferase	84.56
PLN02523		559	galacturonosyltransferase	80.43

>PLN03182 xyloglucan 6-xylosyltransferase; Provisional	Back alignment and domain information

Probab=100.00  E-value=1.2e-147  Score=1129.71  Aligned_cols=428  Identities=67%  Similarity=1.228  Sum_probs=406.6

Q ss_pred             CccccccchhHHHHHHhhccceehhhhhhHHHhhhccccccCCCCCCcccHHHHHhhcccCCCCCCCCcccchhhcccCC
Q 012077            1 MIERCLGAQRSRKFHRALRQCKVTALCLVLTVVVLRGIIGAGEFGTPEKDFYEIRNRLYFPSRKRGGDPHRVLEERRTTS   80 (471)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~k~t~~c~~~t~~vlrgt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~   80 (471)
                      +.+++++.+|+|++||++||+||||||||||||||||| |+|+||++++|+.+++++....++  -++++|+|+|++.+.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~k~t~lc~~~tilvlrgt-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   77 (429)
T PLN03182          1 MLQRCLGTPRGRQLQRTLNNLKITILCGFVTILVLRGT-IAGKFGTPEQDFVELRAHFLSARR--IEEPSRVLAEIRFDD   77 (429)
T ss_pred             CccccccchhhhhHHHHHhccchhhhhhhheeeEeccc-cccccCCCCcchhhhhhhhccccc--cccccccchhccccC
Confidence            46789999999999999999999999999999999999 999999999999999999765333  378999999987222


Q ss_pred             CCCccccCCCCCCCCccccccccccCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCCCCCCCCCCCCcEEEEEeeC
Q 012077           81 SSFATHDRNHNKNNYDEFNVKMFMEDNGEDDEKPDPNEPYSRGPKISNWDAQRAQWLNENPDFANFINKKPRVLLVTGSS  160 (471)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~i~~wd~~r~~wl~~~p~~~~~~~g~prIvIVT~sd  160 (471)
                      +...                     .++.+++++||++||||||+|+|||+||++||++||+|++...|+|||+|||+++
T Consensus        78 ~~~~---------------------~~~~~~~~~~~~~~y~lg~~i~~wd~~R~~wl~~~p~~~~~~~g~prVviVT~sd  136 (429)
T PLN03182         78 DLTD---------------------LDEVEEERWDPNTPYTLGPKISDWDEQRRRWLRKNPGFPSFVNGKPRVLLVTGSQ  136 (429)
T ss_pred             cccc---------------------ccccchhhcCCCCCcccCCCCCCHHHHHHHHHHhCCCCCCccCCCCCEEEEeCCC
Confidence            2211                     2455778999999999999999999999999999999998667999999999999


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHhCCcEEEeccccCcccccccchHHHHHHHHhcCCCccEEEEeeCCceeecCCCC
Q 012077          161 PKACENPVGDHYLLKSIKNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFE  240 (471)
Q Consensus       161 ~~~c~~~~gd~yL~ksikNk~~YAr~HGY~~~~~~~~ld~~~~~~WaKip~IR~aL~a~PeaEWIwWLDsDAlImNp~~s  240 (471)
                      +++|++++|++||+++++||++||++|||+++|+++.|+++++++|+|+++||++|.+||++|||||||+||+||||+++
T Consensus       137 p~~c~n~~gd~yLlks~kNK~dYAr~HGY~~fyn~~~ld~~~p~~WaKlpaLR~aM~~~PeaEWiWWLDsDALImNmsfe  216 (429)
T PLN03182        137 PKPCENPVGDHYLLKSLKNKIDYCRLHGIEIFYNMAHLDAEMAGFWAKLPLLRKLMLAHPEVEWIWWMDSDALFTDMTFE  216 (429)
T ss_pred             CCcCCCcccHHHHHHHHHHHHHHHHHhCCEEEeehhhcCcCCCcchhHHHHHHHHHHHCCCceEEEEecCCceeecCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCeeecCccceeeeCCCCccccccceeEeccHHHHHHHHHhcccCCCCccccchhhhhhhhhcCCCCCCCCc
Q 012077          241 VPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDDAGKKLTKELKDRPAFEADD  320 (471)
Q Consensus       241 LpLe~~~d~nLvI~g~~dlI~tqddw~GLNtGsFLIRNs~WS~~fLDaWa~m~P~~pv~~~~g~~L~~~l~~~~~f~~~D  320 (471)
                      ||+++|+++|+|||||.++++.+++|+|||+|||||||||||++|||+|++|+|++|+|++||++|+++|+++|.|+++|
T Consensus       217 lPlery~~~NlVihg~~~~l~~~kdW~GLNtGsFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDD  296 (429)
T PLN03182        217 IPLEKYEGYNLVIHGWDELVYDQKSWIGLNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADD  296 (429)
T ss_pred             CCHhHcCCcCeeeccchhhheeccccCccceeeEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCccc
Confidence            99999999999999999999999899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHhhccccccCeeeeecchhhchhhhHhhhhHHHHHHhcCCCCCCCCCCeEEEcccCccCCCCCCChHHHHHHH
Q 012077          321 QSAMVYSLATERDKWGDKVYLESEYYLHVNWAILVDRYEEMIEKYRPGLGDHRWPLVTHFVGCKPCAKFGDNLAERCLRQ  400 (471)
Q Consensus       321 QsAL~yLL~~q~~~w~~kV~len~y~l~gyW~~iv~r~e~~~~~y~pG~GD~r~pFVtHFaGC~~c~~~~~y~~~~C~~~  400 (471)
                      ||||+|||.+++++|++|||+|++|||||||.+||++||++|++||||.||+||||||||+|||||+++++|++++|+++
T Consensus       297 QSAlvyLl~~~~~~w~~kv~le~~y~l~Gyw~~iv~~yee~~~~~~~g~gd~rwPfvtHF~GckpC~~~~~y~~~~C~~~  376 (429)
T PLN03182        297 QSALVYLLLTQRERWGDKVYLENSYYLHGYWVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVGCKPCGGYGDYPVERCLKQ  376 (429)
T ss_pred             HHHHHHHHHhcchhhccceEEeecceeccccHHHHHHHHHHHHhcCCCCCCcccceeEeeccceecCCCCCcCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHhhccchhhHHHhhccccCCCCCcCceecccccCCcccccccccCCCccc
Q 012077          401 MDRAFTFGDNQILRTYGFTHKSLASGRVKRVRNETRNPLEVKDKVRLLSPPY  452 (471)
Q Consensus       401 M~ra~nfadnqvl~~yg~~h~~l~~~~v~~~~~~~~~pl~~~~~~~~~~~~~  452 (471)
                      |+|||||||||||++|||+|++|+|.+|+||||||++||++++++++.++.+
T Consensus       377 m~ra~nFaDnQvL~~yGf~H~~l~~~~v~~~~~~~~~pl~~~~~~~~~~~~~  428 (429)
T PLN03182        377 MERAFNFADNQVLELYGFRHKSLASAEVKRVRNDTSNPLEAKDELGLRHPAF  428 (429)
T ss_pred             HHHHhccchHHHHHHhCccccccCccceeehhccCCCcchhhhhhcccCCCC
Confidence            9999999999999999999999999999999999999999999988766653

>PLN03181 glycosyltransferase; Provisional	Back alignment and domain information

>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif	Back alignment and domain information

>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function	Back alignment and domain information

>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases []	Back alignment and domain information

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family	Back alignment and domain information

>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen	Back alignment and domain information

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	Back alignment and domain information

>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis	Back alignment and domain information

>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>PLN00176 galactinol synthase	Back alignment and domain information

>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional	Back alignment and domain information

>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis	Back alignment and domain information

>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PLN02769 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02718 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02829 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02742 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02523 galacturonosyltransferase	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		471
2p6w_A		213	VP54, putative glycosyltransferase (mannosyltransf	1e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A* Length = 213	Back alignment and structure

 Score = 57.2 bits (137), Expect = 1e-09
 Identities = 26/143 (18%), Positives = 49/143 (34%), Gaps = 11/143 (7%)

Query: 148 NKKPRVLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHG--LEIFYSTALLDAEMAGF 205
              P + +++G  PK         Y  K+ +   +YC +HG       S  L   E A  
Sbjct: 3   MTTPCITILSGHFPKETI------YARKTKELVEEYCSIHGYNFYYEESEPLETEEHALH 56

Query: 206 WAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKN 265
           + +  +I+      P  E+  W+DSD          P   + D +     ++        
Sbjct: 57  FRRSWIIQQAAEKFPSTEWFLWLDSDVYVNPKNKNKPITSFIDLSDPNILYHTFHEAPWG 116

Query: 266 WIGLNTGSFLLRNCQWSLDILDA 288
              +NTG   ++        ++ 
Sbjct: 117 SYPINTG---VKFVHKDALEIEK 136

PyMOL of 2p6w

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		471
2p6w_A		213	VP54, putative glycosyltransferase (mannosyltransf	100.0
1ll2_A		333	Glycogenin-1; protein-substrate complex, beta-alph	96.31
1g9r_A		311	Glycosyl transferase; alpha-beta structure; HET: U	96.23
3u2u_A		263	Glycogenin-1, GN-1, GN1; structural genomics, stru	95.12
3tzt_A		276	Glycosyl transferase family 8; structural genomics	94.79

>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*	Back alignment and structure

Probab=100.00  E-value=3.8e-41  Score=316.16  Aligned_cols=135  Identities=24%  Similarity=0.488  Sum_probs=122.3

Q ss_pred             CCCcEEEEEeeCCCCCCCCcchHHHHHHHHHHHHHHHHhCCcEEEecccc-Cc-ccccccchHHHHHHHHhcCCCccEEE
Q 012077          149 KKPRVLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHGLEIFYSTALL-DA-EMAGFWAKLPLIRNLLLGHPEVEFLW  226 (471)
Q Consensus       149 g~prIvIVT~sd~~~c~~~~gd~yL~ksikNk~~YAr~HGY~~~~~~~~l-d~-~~~~~WaKip~IR~aL~a~PeaEWIw  226 (471)
                      .+|||+||||++|++|      +|++++++||++||++|||+++|+...+ +. ++.+.|.|..+||++|.+||++||||
T Consensus         4 ~~p~IllvtGs~p~ew------~yl~ksiKNK~DYArrHGYelfy~d~~l~k~~e~a~eW~ksW~IR~AM~khPeAEWfW   77 (213)
T 2p6w_A            4 TTPCITILSGHFPKET------IYARKTKELVEEYCSIHGYNFYYEESEPLETEEHALHFRRSWIIQQAAEKFPSTEWFL   77 (213)
T ss_dssp             --CCEEEEEECSCTTC------HHHHHHHHHHHHHHHHHTCEEEEECSCCSCCSHHHHHHTHHHHHHHHHHHCTTCSEEE
T ss_pred             CCceEEEEeCCCCCCc------HHHHHHHHHHHHHHHHcCCeEEEeecccccchhhcccchhhHHHHHHHHHCCCceEEE
Confidence            4799999999999987      8999999999999999999999974433 33 36778999999999999999999999


Q ss_pred             EeeCCceeecCCCCCCcccc---CCCCeeecCccceeeeCCCCcccccccee-------EeccHHHHHHHHHhccc
Q 012077          227 WMDSDAMFTDMTFEVPWERY---KDYNLVMHGWNEMVYDQKNWIGLNTGSFL-------LRNCQWSLDILDAWAPM  292 (471)
Q Consensus       227 WLDsDAlImNp~~sLpLe~~---~d~nLvI~g~~dlI~tqddw~GLNtGsFL-------IRNs~WS~~fLDaWa~m  292 (471)
                      |||+||+||||++++|++++   +++|+++|||.++++++   .||||||||       |||||||++|||+|++|
T Consensus        78 WLDsDAlIMDmnf~lPLe~yldl~~~NlvvHGw~e~~~~~---~~lNtGvfL~~~~~~~irncqWSld~~~~w~~~  150 (213)
T 2p6w_A           78 WLDSDVYVNPKNKNKPITSFIDLSDPNILYHTFHEAPWGS---YPINTGVKFVHKDALEIEKIVWSLRNEAPWNTF  150 (213)
T ss_dssp             EECTTEEECGGGTTSCGGGTCCCCCTTCCEEEECCTTTSS---SSCCTTEEEEEGGGHHHHHHHHHTTTSTTTTST
T ss_pred             EecCCceeecCCCCCcHHHccccccCceeecccccccccc---ccccceeeeecccchhhhhceeehhhhhcccCC
Confidence            99999999999999999999   99999999998887764   499999999       99999999999999986

PyMOL of 2p6w

>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*	Back alignment and structure

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*	Back alignment and structure

>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A	Back alignment and structure

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		471
d1ga8a_		282	Galactosyltransferase LgtC {Neisseria meningitidis	97.32
d1ll2a_		263	Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId:	97.06

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=97.32  E-value=0.00071  Score=62.43  Aligned_cols=57  Identities=14%  Similarity=0.073  Sum_probs=33.3

Q ss_pred             HHHHHHhCCcEEE-ec--cccC--cccccccchHHHHHHHHhc-CCCccEEEEeeCCceeecC
Q 012077          181 IDYCRVHGLEIFY-ST--ALLD--AEMAGFWAKLPLIRNLLLG-HPEVEFLWWMDSDAMFTDM  237 (471)
Q Consensus       181 ~~YAr~HGY~~~~-~~--~~ld--~~~~~~WaKip~IR~aL~a-~PeaEWIwWLDsDAlImNp  237 (471)
                      ..+...++..+.+ ..  ..+.  +.....|++..+.|-.+-. .|+++-|.|||+|++|...
T Consensus        49 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~l~~~lp~~~kiiyLD~D~iv~~d  111 (282)
T d1ga8a_          49 AANLRGGGGNIRFIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDS  111 (282)
T ss_dssp             HHTSGGGTTTEEEEECCGGGGTTSCCCCTTCCGGGGGGGGHHHHCCSCSCEEEECSSEEECSC
T ss_pred             HHHHHHcCCeEEEEECCchHhccccccccccCHHHHHHHHHhhhCCccceEEEecCCEEEecc
Confidence            3445567777764 22  1111  1123345555444433322 3889999999999999974

PyMOL of d1ga8a_

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure