Citrus Sinensis ID: 012183


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------47
MEALLRPRIMLSLTIILIPIFLFISGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAATGKKKKKTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVEPTDRAGNELKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTVVVLEKKNVVPVHNIPFQVYYTFKPIFMLAEPMMLASAFFLFFTACVAYLHVDLSIRK
cccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEEccccEEEEEEEEEEEEcccccccEEEEEccccccccEEEEEEEEccccccccccEEcccccccccccccccEEEEEEEccccccccEEEEEEEEEEccccccccccccccccEEEEEEEccEEccccEEcEEEEEEEEccccEEEEcccccccccccEEEEcccccccccccccEEEEEEEccccEEEEEEEEEEEEEEEEEEEEEEEEEEEEccccccccccccccccccccccccccEEEccccccccccEEEEccccEEEEcEEEcccccEEEEEEEEccccccccEEEEEEEEccccccEEEEEccccEEEEEEEccccccEEEEEEEEEEEccccccccEEEccccEEEEEEEEEEEccccccEEEEEEEEcccccccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEc
ccccHHHHHHHHHHHHHHHHHHHHHHHccHHcEEccEEEEEEccccEEEEEEEEEEEEcccccccEEEEEccHHHHcccEEEEEEEcccccccccEEEEEEEEEEEccccccEEEEEEEcccccccccEEEEEEEEEEEcccccccHHccccccEEEEEEcccccccccccEEEEEEEEEcccccccccccccccccccEEEEcccccccccccccEEEEEEccccEEEEEEEEEEEEEEccccEEEEEEEEEEcccccccccccEEEHHcccccccccHHHHEEcccccccccEEEEEEEccEEcccEccccccEEEEEEccccccccccccEEEEEEcccHHHHHHccccccEEEEEEcccccccEEEEEEEEEEEEcccccEEEEEccccccccccEEEEEEEccccEEEEEEEccccHHccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEcc
meallrprIMLSLTIILIPIFLfisgasshqIRINNAERRIDLSTHIVKVFLTLKventgktsaseillafpptqvDHLAFLEALAATGKKKKKTYVSLavkptqlpdapnetnyYTIVLanplntgetATLEILYILThslepfpveisqsesqlvyyrdsalilspyhikqqttfikipsnkvesftrveptdragnelkygpyedrppysyspllvhfennnpfSVVEELVREVEIshwgnlqiTEQYKLAHAgarhkgifsrvdyqskptfsgvsSFKHLLarlpprvhsvyyrdeignistshlradswkiseleiepryplfggwratfvigyglpledflfessdgrrylnftfgcpLVETVVDKLTIkvvlpegakgpsavvpfpveqrletkysyLDVVGRTVVVLEkknvvpvhnipfqvyytfkpifmlaEPMMLASAFFLFFTACVAYLHVDLSIRK
MEALLRPRIMLSLTIILIPIFLFISGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAAtgkkkkktyvslavkptqlpdapneTNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQttfikipsnkvesftrveptdragnelkygpyeDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIgnistshlradswKISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVlpegakgpsavvpfpveqrLETKYSYLDVVGRTVVVLekknvvpvhnipfQVYYTFKPIFMLAEPMMLASAFFLFFTACVAYLHVDLSIRK
MEALLRPRIMlsltiilipiflfisGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAATGkkkkkTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVEPTDRAGNELKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTvvvlekknvvpvHNIPFQVYYTFKPIFMLAEPMMLASAFFLFFTACVAYLHVDLSIRK
****LRPRIMLSLTIILIPIFLFISGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEAL***************************TNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESF**************YG*Y**RPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTVVVLEKKNVVPVHNIPFQVYYTFKPIFMLAEPMMLASAFFLFFTACVAYLHVDLS***
*******RIMLSLTIILIPIFLFISGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEAL******************T**PDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIKI********************LKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDYQSKPT*SGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTVVVLEKKNVVPVHNIPFQVYYTFKPIFMLAEPMMLASAFFLFFTACVAYLHVDLSIR*
MEALLRPRIMLSLTIILIPIFLFISGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAATGKKKKKTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVEPTDRAGNELKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTVVVLEKKNVVPVHNIPFQVYYTFKPIFMLAEPMMLASAFFLFFTACVAYLHVDLSIRK
*EALLRPRIMLSLTIILIPIFLFISGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAATGKKKKKTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVEPTDRAGNELKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTVVVLEKKNVVPVHNIPFQVYYTFKPIFMLAEPMMLASAFFLFFTACVAYLHVDLSIR*
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiii
iiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiii
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEALLRPRIMLSLTIILIPIFLFISGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAATGKKKKKTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVEPTDRAGNELKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTVVVLEKKNVVPVHNIPFQVYYTFKPIFMLAEPMMLASAFFLFFTACVAYLHVDLSIRK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query469 2.2.26 [Sep-21-2011]
Q9ZUA0464 Dolichyl-diphosphooligosa yes no 0.961 0.971 0.732 0.0
B9FDT1473 Dolichyl-diphosphooligosa yes no 0.931 0.923 0.710 0.0
Q0DJC5 615 Dolichyl-diphosphooligosa yes no 0.923 0.704 0.566 1e-147
Q9SFX3 614 Dolichyl-diphosphooligosa no no 0.925 0.706 0.517 1e-133
Q9GMB0 608 Dolichyl-diphosphooligosa yes no 0.901 0.695 0.377 5e-82
Q5RFB6 607 Dolichyl-diphosphooligosa yes no 0.901 0.696 0.377 1e-80
P04843 607 Dolichyl-diphosphooligosa yes no 0.901 0.696 0.377 2e-80
Q91YQ5 608 Dolichyl-diphosphooligosa yes no 0.901 0.695 0.377 2e-80
Q4R4T0 607 Dolichyl-diphosphooligosa N/A no 0.901 0.696 0.375 3e-80
P07153 605 Dolichyl-diphosphooligosa yes no 0.901 0.699 0.373 3e-79
>sp|Q9ZUA0|OST1B_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B OS=Arabidopsis thaliana GN=OST1B PE=2 SV=1 Back     alignment and function desciption
 Score =  690 bits (1781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/453 (73%), Positives = 390/453 (86%), Gaps = 2/453 (0%)

Query: 16  ILIPIFLFISGASSHQ-IRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPT 74
           + + + L IS  SS Q ++I NAERRIDLS+HIVK FLTLKVEN GK  A+E+LLAFPPT
Sbjct: 10  VFVAVLLSISAFSSAQDLQIVNAERRIDLSSHIVKAFLTLKVENIGKDPAAEMLLAFPPT 69

Query: 75  QVDHLAFLEALAATGKKKKKTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEI 134
           Q+ +LA ++ALA TGKKKKKTY+ L VKPT+ PDAPN+T YY +   +PL  GET +LE+
Sbjct: 70  QIKNLAMVQALATTGKKKKKTYLPLDVKPTEQPDAPNDTGYYRVTFISPLGPGETVSLEV 129

Query: 135 LYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVEPT 194
           LYILTHSLEPFPVEI+QSESQLVYY DSA+ILSPYH+KQQTTFIK PS +VESFT +EP 
Sbjct: 130 LYILTHSLEPFPVEITQSESQLVYYHDSAVILSPYHVKQQTTFIKTPSTRVESFTSIEPA 189

Query: 195 DRAGNELKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLA 254
           +RAG E+KYGPYE+R  YSY+P+++HFENN+PF+VVEELVRE+EISHWG+LQITE Y+L 
Sbjct: 190 NRAGKEIKYGPYENRASYSYTPVIIHFENNSPFAVVEELVREIEISHWGSLQITENYRLT 249

Query: 255 HAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSW 314
           H GARHKG+FSRVDYQSK + SG SSF  LLA LPPRV+SVYYRDEIGNISTSHLR   +
Sbjct: 250 HGGARHKGVFSRVDYQSKRSVSGASSFNALLAVLPPRVNSVYYRDEIGNISTSHLRT-GF 308

Query: 315 KISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLT 374
           + SELE EPRYPLFGGW ATF+IGY +PLED+LFE+SDGRRYLNFTFGCPLVET+V+KLT
Sbjct: 309 RKSELEFEPRYPLFGGWSATFIIGYRVPLEDYLFEASDGRRYLNFTFGCPLVETIVNKLT 368

Query: 375 IKVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTVVVLEKKNVVPVHNIPFQVYYTF 434
           IKVVLPEG+K PSAV+PF V Q L+ KYSYLD+VGRTVVVL+K NVVP HN+PFQVYYTF
Sbjct: 369 IKVVLPEGSKDPSAVLPFTVNQELQVKYSYLDIVGRTVVVLQKDNVVPTHNVPFQVYYTF 428

Query: 435 KPIFMLAEPMMLASAFFLFFTACVAYLHVDLSI 467
           KPI+MLAEP ML SAFFL F A +AY+H+DL+I
Sbjct: 429 KPIYMLAEPFMLVSAFFLVFVASLAYVHIDLNI 461




Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 9EC: 9EC: .EC: 1EC: 8
>sp|B9FDT1|OST1B_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B OS=Oryza sativa subsp. japonica GN=OST1B PE=2 SV=1 Back     alignment and function description
>sp|Q0DJC5|OST1A_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A OS=Oryza sativa subsp. japonica GN=OST1A PE=2 SV=1 Back     alignment and function description
>sp|Q9SFX3|OST1A_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A OS=Arabidopsis thaliana GN=OST1A PE=2 SV=1 Back     alignment and function description
>sp|Q9GMB0|RPN1_PIG Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Sus scrofa GN=RPN1 PE=1 SV=1 Back     alignment and function description
>sp|Q5RFB6|RPN1_PONAB Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Pongo abelii GN=RPN1 PE=2 SV=1 Back     alignment and function description
>sp|P04843|RPN1_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Homo sapiens GN=RPN1 PE=1 SV=1 Back     alignment and function description
>sp|Q91YQ5|RPN1_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus GN=Rpn1 PE=2 SV=1 Back     alignment and function description
>sp|Q4R4T0|RPN1_MACFA Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Macaca fascicularis GN=RPN1 PE=2 SV=1 Back     alignment and function description
>sp|P07153|RPN1_RAT Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus GN=Rpn1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query469
224097868469 predicted protein [Populus trichocarpa] 0.963 0.963 0.817 0.0
118488519469 unknown [Populus trichocarpa] 0.968 0.968 0.799 0.0
224113051463 predicted protein [Populus trichocarpa] 0.968 0.980 0.799 0.0
118488320469 unknown [Populus trichocarpa] 0.976 0.976 0.790 0.0
225449032466 PREDICTED: dolichyl-diphosphooligosaccha 0.993 1.0 0.767 0.0
356535631469 PREDICTED: dolichyl-diphosphooligosaccha 0.946 0.946 0.752 0.0
356576227463 PREDICTED: dolichyl-diphosphooligosaccha 0.948 0.961 0.744 0.0
357443215473 Dolichyl-diphosphooligosaccharide-protei 0.997 0.989 0.706 0.0
449487210484 PREDICTED: dolichyl-diphosphooligosaccha 0.993 0.962 0.744 0.0
449449310484 PREDICTED: dolichyl-diphosphooligosaccha 0.993 0.962 0.744 0.0
>gi|224097868|ref|XP_002311086.1| predicted protein [Populus trichocarpa] gi|222850906|gb|EEE88453.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  766 bits (1979), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/454 (81%), Positives = 409/454 (90%), Gaps = 2/454 (0%)

Query: 17  LIPIFLFISGASS-HQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQ 75
           LI  FL IS ASS +QI+I NAERRIDLS+HIVKVFLTLKVEN G T ASEI+LAF P Q
Sbjct: 17  LILTFLTISAASSTNQIQILNAERRIDLSSHIVKVFLTLKVENVGTTPASEIVLAFAPAQ 76

Query: 76  VDHLAFLEALAATGKKKKKTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEIL 135
            DHLA ++A AA GKKKKK+YV L V PT+LPDAPN T Y++I L NPL++GETATLE+L
Sbjct: 77  ADHLALVKAQAAIGKKKKKSYVHLDVNPTELPDAPNGTKYFSISLLNPLSSGETATLEVL 136

Query: 136 YILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVEPTD 195
           YILTHSLEPFP EISQSESQLVY+RDSALILSPYH+KQQTTF+K PS KVESFTRVEPT 
Sbjct: 137 YILTHSLEPFPAEISQSESQLVYFRDSALILSPYHVKQQTTFLKTPSTKVESFTRVEPTK 196

Query: 196 RAGNELKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAH 255
            AG ELKYGPYED PPYS+SP++VH ENN+PF+VVEEL+REVEISHWGNLQITE YKL H
Sbjct: 197 LAGRELKYGPYEDHPPYSFSPVIVHLENNSPFAVVEELLREVEISHWGNLQITEHYKLVH 256

Query: 256 AGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWK 315
           AGARHKG+FSRV+YQS+P+FSG SSFKHLLA LPPRVHSVYYRD+IGNIS+SHLR+D+ K
Sbjct: 257 AGARHKGVFSRVEYQSRPSFSGTSSFKHLLASLPPRVHSVYYRDDIGNISSSHLRSDNRK 316

Query: 316 ISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTI 375
            SELEIEPRYPLFGGW+ATFVIGYGLPLEDFLFES DG+RYLNF+FGCPL ETVVDKLTI
Sbjct: 317 -SELEIEPRYPLFGGWKATFVIGYGLPLEDFLFESPDGKRYLNFSFGCPLAETVVDKLTI 375

Query: 376 KVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTVVVLEKKNVVPVHNIPFQVYYTFK 435
           KVVLPEG+K PSAVVPFPVEQRLETKYSYLDVVGRTV+VLE KNVVP H  PFQVYYTFK
Sbjct: 376 KVVLPEGSKDPSAVVPFPVEQRLETKYSYLDVVGRTVLVLENKNVVPEHITPFQVYYTFK 435

Query: 436 PIFMLAEPMMLASAFFLFFTACVAYLHVDLSIRK 469
           PIFMLAEP+MLAS FFLFF AC+AYLH+DLSIRK
Sbjct: 436 PIFMLAEPLMLASVFFLFFMACLAYLHIDLSIRK 469




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488519|gb|ABK96072.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224113051|ref|XP_002316373.1| predicted protein [Populus trichocarpa] gi|222865413|gb|EEF02544.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118488320|gb|ABK95979.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225449032|ref|XP_002273327.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 [Vitis vinifera] gi|296086009|emb|CBI31450.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356535631|ref|XP_003536348.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356576227|ref|XP_003556235.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like [Glycine max] Back     alignment and taxonomy information
>gi|357443215|ref|XP_003591885.1| Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit [Medicago truncatula] gi|355480933|gb|AES62136.1| Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit [Medicago truncatula] Back     alignment and taxonomy information
>gi|449487210|ref|XP_004157528.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449449310|ref|XP_004142408.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query469
TAIR|locus:2065378464 AT2G01720 "AT2G01720" [Arabido 0.942 0.952 0.709 2.1e-173
TAIR|locus:2014579 614 AT1G76400 "AT1G76400" [Arabido 0.925 0.706 0.487 9.4e-114
UNIPROTKB|E1C0F1 601 RPN1 "Dolichyl-diphosphooligos 0.923 0.720 0.384 9.7e-80
UNIPROTKB|F1SPG2 608 RPN1 "Dolichyl-diphosphooligos 0.901 0.695 0.364 1.5e-74
UNIPROTKB|Q9GMB0 608 RPN1 "Dolichyl-diphosphooligos 0.901 0.695 0.364 1.5e-74
MGI|MGI:98084 608 Rpn1 "ribophorin I" [Mus muscu 0.901 0.695 0.368 1.9e-74
ZFIN|ZDB-GENE-030131-4286 598 rpn1 "ribophorin I" [Danio rer 0.910 0.714 0.344 1.9e-74
UNIPROTKB|P04843 607 RPN1 "Dolichyl-diphosphooligos 0.906 0.700 0.368 8.4e-74
UNIPROTKB|E2RQ08 607 RPN1 "Uncharacterized protein" 0.901 0.696 0.361 1.1e-73
UNIPROTKB|A3KN04 609 RPN1 "Uncharacterized protein" 0.901 0.694 0.364 1.2e-72
TAIR|locus:2065378 AT2G01720 "AT2G01720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1685 (598.2 bits), Expect = 2.1e-173, P = 2.1e-173
 Identities = 315/444 (70%), Positives = 371/444 (83%)

Query:    27 ASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALA 86
             +S+  ++I NAERRIDLS+HIVK FLTLKVEN GK  A+E+LLAFPPTQ+ +LA ++ALA
Sbjct:    22 SSAQDLQIVNAERRIDLSSHIVKAFLTLKVENIGKDPAAEMLLAFPPTQIKNLAMVQALA 81

Query:    87 ATGXXXXXTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFP 146
              TG     TY+ L VKPT+ PDAPN+T YY +   +PL  GET +LE+LYILTHSLEPFP
Sbjct:    82 TTGKKKKKTYLPLDVKPTEQPDAPNDTGYYRVTFISPLGPGETVSLEVLYILTHSLEPFP 141

Query:   147 VEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVEPTDRAGNELKYGPY 206
             VEI+QSESQLVYY DSA+ILSPYH+KQQTTFIK PS +VESFT +EP +RAG E+KYGPY
Sbjct:   142 VEITQSESQLVYYHDSAVILSPYHVKQQTTFIKTPSTRVESFTSIEPANRAGKEIKYGPY 201

Query:   207 EDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSR 266
             E+R  YSY+P+++HFENN+PF+VVEELVRE+EISHWG+LQITE Y+L H GARHKG+FSR
Sbjct:   202 ENRASYSYTPVIIHFENNSPFAVVEELVREIEISHWGSLQITENYRLTHGGARHKGVFSR 261

Query:   267 VDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYP 326
             VDYQSK + SG SSF  LLA LPPRV+SVYYRDEIGNISTSHLR   ++ SELE EPRYP
Sbjct:   262 VDYQSKRSVSGASSFNALLAVLPPRVNSVYYRDEIGNISTSHLRT-GFRKSELEFEPRYP 320

Query:   327 LFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGP 386
             LFGGW ATF+IGY +PLED+LFE+SDGRRYLNFTFGCPLVET+V+KLTIKVVLPEG+K P
Sbjct:   321 LFGGWSATFIIGYRVPLEDYLFEASDGRRYLNFTFGCPLVETIVNKLTIKVVLPEGSKDP 380

Query:   387 SAVVPFPVEQRLETKYSYLDVVGRTXXXXXXXXXXXXHNIPFQVYYTFKPIFMLAEPMML 446
             SAV+PF V Q L+ KYSYLD+VGRT            HN+PFQVYYTFKPI+MLAEP ML
Sbjct:   381 SAVLPFTVNQELQVKYSYLDIVGRTVVVLQKDNVVPTHNVPFQVYYTFKPIYMLAEPFML 440

Query:   447 ASAFFLFFTACVAYLHVDLSI-RK 469
              SAFFL F A +AY+H+DL+I RK
Sbjct:   441 VSAFFLVFVASLAYVHIDLNIVRK 464




GO:0004576 "oligosaccharyl transferase activity" evidence=ISS
GO:0004579 "dolichyl-diphosphooligosaccharide-protein glycotransferase activity" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA
GO:0006486 "protein glycosylation" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2014579 AT1G76400 "AT1G76400" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1C0F1 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1SPG2 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q9GMB0 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:98084 Rpn1 "ribophorin I" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-4286 rpn1 "ribophorin I" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P04843 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RQ08 RPN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|A3KN04 RPN1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9ZUA0OST1B_ARATH2, ., 4, ., 9, 9, ., 1, 80.73280.96160.9719yesno
Q54C27OST1_DICDI2, ., 4, ., 1, ., 1, 1, 90.34510.90190.9195yesno
B9FDT1OST1B_ORYSJ2, ., 4, ., 9, 9, ., 1, 80.71070.93170.9238yesno
Q0DJC5OST1A_ORYSJ2, ., 4, ., 9, 9, ., 1, 80.56650.92320.7040yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.1190.824

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_Genewise1_v1.C_LG_VIII1892
hypothetical protein (469 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_fgenesh4_pg.C_LG_X0451
hypothetical protein (846 aa)
       0.800

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query469
pfam04597429 pfam04597, Ribophorin_I, Ribophorin I 1e-170
>gnl|CDD|218165 pfam04597, Ribophorin_I, Ribophorin I Back     alignment and domain information
 Score =  485 bits (1251), Expect = e-170
 Identities = 182/436 (41%), Positives = 246/436 (56%), Gaps = 13/436 (2%)

Query: 32  IRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAATGKK 91
               N ER IDL+   VK  + + ++N G    SE   AFPP + D+LA L A      K
Sbjct: 2   WENVNVERTIDLTKSYVKETIKITIKNIGDEPQSEYYFAFPPDEADNLAGLSA-KDKDAK 60

Query: 92  KKKTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQ 151
           +K  +  + V+         +T Y+ I L  PL  GE  TL++ Y+LT+ L+P P EI+Q
Sbjct: 61  EKGKFEPIEVENGS------DTGYFKITLPKPLAPGEQVTLKVSYVLTNPLKPLPAEITQ 114

Query: 152 SESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVE--PTDRAGNELKYGPYEDR 209
           SE QL+ Y  +A   SPY  K+Q T IK PS  + S+T+    P  R GN L YGPYE+ 
Sbjct: 115 SEKQLLLYETNAYFYSPYPTKKQKTKIKGPSGNILSYTKTPNLPPTRQGNTLTYGPYENV 174

Query: 210 PPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDY 269
           P +S  P+ VH+ENN P   V  L R++E+SHWGN+ + E Y+L + GA+ KG FSRVDY
Sbjct: 175 PAFSLEPITVHYENNKPLITVTNLERDIEVSHWGNIAVEEYYELTNNGAKLKGGFSRVDY 234

Query: 270 QSKPT-FSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYPLF 328
           Q         S+ K L   LP     VYY DEIGN+STS +R D     ELE++PR+PLF
Sbjct: 235 QKGSYSTRNSSALKSLKTPLPAGATDVYYTDEIGNVSTSRVREDKDSA-ELELKPRFPLF 293

Query: 329 GGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGPSA 388
           GGW+  F IG+ LPL DFL +  D    L   F     + V D +T+KV+LPEGA+    
Sbjct: 294 GGWKYNFTIGWNLPLSDFLRKDGDNTYVLKVPFLNGPKDVVYDNVTLKVILPEGAEDIKV 353

Query: 389 VVPFPVEQR-LETKYSYLDVVGRTVVVLEKKNVVP-VHNIPFQVYYTFKPIFMLAEPMML 446
             PFP++   LE + SYLD  GR VV LEKKN+V    +    V Y +    +L +P+++
Sbjct: 354 ETPFPIDSVELELEKSYLDTKGRPVVTLEKKNLVDEHRDQDVLVTYKYSKSAILRKPLLI 413

Query: 447 ASAFFLFFTACVAYLH 462
           A  FF+ F A +    
Sbjct: 414 AGGFFILFLAVILLGR 429


Ribophorin I is an essential subunit of oligosaccharyltransferase (OST), which is also known as Dolichyl-diphosphooligosaccharide--protein glycosyltransferase, (EC:2.4.1.119). OST catalyzes the transfer of an oligosaccharide from dolichol pyrophosphate to selected asparagine residues of nascent polypeptides as they are translocated into the lumen of the rough endoplasmic reticulum. Ribophorin I and OST48 are though to be responsible for OST catalytic activity. Both yeast and mammalian proteins are glycosylated but the sites are not conserved. Glycosylation may contribute towards general solubility but is unlikely to be involved in a specific biochemical function Most family members are predicted to have a transmembrane helix at the C terminus of this region. Length = 429

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 469
KOG2291 602 consensus Oligosaccharyltransferase, alpha subunit 100.0
PF04597432 Ribophorin_I: Ribophorin I; InterPro: IPR007676 Ri 100.0
PF08487118 VIT: Vault protein inter-alpha-trypsin domain; Int 91.6
smart00609130 VIT Vault protein Inter-alpha-Trypsin domain. 91.49
PF09972 511 DUF2207: Predicted membrane protein (DUF2207); Int 81.88
>KOG2291 consensus Oligosaccharyltransferase, alpha subunit (ribophorin I) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
Probab=100.00  E-value=2.2e-136  Score=1054.76  Aligned_cols=457  Identities=51%  Similarity=0.834  Sum_probs=428.8

Q ss_pred             hhhHHHHHHHHHHHHHHhhccCCCCCeEEeeEEEEEEcCCCeEEEEEEEEEEeCCCCCccEEEEEcCCCcccceeEEEEE
Q 012183            6 RPRIMLSLTIILIPIFLFISGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEAL   85 (469)
Q Consensus         6 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~n~~v~R~idL~~~~vk~~~~i~~kN~g~~p~~~y~~~l~~~~~~~ls~i~a~   85 (469)
                      +++||+..+++|..++..+++.+++.|+|.|++|||||++|+||++++++++|+|++|+++|.+++++....++|+++|.
T Consensus         5 ~~~~~~~l~l~l~aia~~~a~~a~~~w~n~nv~RTIDlsS~ivK~tt~l~i~N~g~ePatey~~a~~~~~~~~la~ls~~   84 (602)
T KOG2291|consen    5 SASWALVLVLLLFAIASGAASSAEQDWVNVNVERTIDLSSQIVKVTTELSIENIGSEPATEYLLAFEKELGASLAFLSVA   84 (602)
T ss_pred             hhHHHHHHHHHHHHHhhccccCCccccccccceEEEehhhhhhhheeEEEEEecCCCchheEEEeccCccccceeEEEEe
Confidence            66777776666666666567778999999999999999999999999999999999999999999999999999999998


Q ss_pred             EccCccccceeeeeeeeeecCCCCCCCceEEEEEeCCCCCCCCeEEEEEEEEEcccccccCcccCcCCceeEEEEeCcee
Q 012183           86 AATGKKKKKTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALI  165 (469)
Q Consensus        86 ~~~~~~k~~~~~~l~v~~~~~~~~~~~~~~y~I~Lp~pl~~~~~~~l~v~~~~~~~~~P~P~~I~q~e~Q~l~~~~~~~~  165 (469)
                      ..+++++  +...+++.+.++.+ .++ ++|.|+||.|+.||++++|.|++++++.++|+|++|+|+|+|+|+|.+|+|+
T Consensus        85 ~~~g~~~--~~l~~s~~~~~~~~-~~~-~~y~v~lp~pl~pge~vTl~V~~~~t~vl~P~Pe~I~QsE~Q~vv~~tn~~~  160 (602)
T KOG2291|consen   85 FTEGKKK--TLLKLSVNPPKKDG-ASE-RVYTVTLPNPLSPGEKVTLIVEAVLTHVLRPLPEEITQSEEQFVVYETNAYL  160 (602)
T ss_pred             eccCccc--cccccccCCcccCC-Ccc-ceEEEeCCCCCCCCceEEEEEEeecccCcccChhhhCcCceeeEEEeccccc
Confidence            8776633  23456666655322 233 7999999999999999999999999999999999999999999999999999


Q ss_pred             cCcceeceEEEEEEeCCCccceeeccCCccccCCeEEeccCCCCCCCCccCeEEEEEccccceEEeeeEEEEEEecccce
Q 012183          166 LSPYHIKQQTTFIKIPSNKVESFTRVEPTDRAGNELKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNL  245 (469)
Q Consensus       166 ~SpY~t~~q~t~v~~~s~~i~s~t~~~~~~~~g~~i~yGP~~~v~p~s~~~~~Vhye~n~P~~~v~~l~R~IeVSHWGni  245 (469)
                      +|||.|++|+|++++||+++++||+.++.+++|+.++||||+|+|+|+++|+.||||||.||+++++|+|+|||||||||
T Consensus       161 ~SpY~Tk~Q~t~ikl~Ss~ies~T~~~~~k~~gn~l~yGPyeni~afs~~pl~VhYEnnaPf~~v~~L~R~IevSHWgnI  240 (602)
T KOG2291|consen  161 LSPYDTKSQSTTIKLPSSKIESYTTVEPSKRSGNELKYGPYENIPAFSQEPLVVHYENNAPFVTVENLEREIEVSHWGNI  240 (602)
T ss_pred             cCcccccceeEEEEcccccceeccccCcccccCceeeecCccccccccCCceEEEEecCCCcceeeeEEEEEEeecceee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEEEEEcCCCCCCCccchhcccCCCCCCceeeeEeeeccCCCccCeEEEeccceeeeeeeeecCCceeEEEEecCC
Q 012183          246 QITEQYKLAHAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRY  325 (469)
Q Consensus       246 ~veE~y~l~N~GA~Lkg~FSR~d~~~~~~~~~~~~~~~l~~~LP~~a~d~YY~D~IGNISTS~~r~~~~~~~~l~l~PRf  325 (469)
                      +|||+|+|+|+||+|||+|||+|||++...++.++++++.+.||++|+|+||||+||||||||+|.+.++ ++|+|+|||
T Consensus       241 qVeE~~~lth~gAkLkg~FSR~d~q~~~~~~g~sai~~l~~~LP~~A~dvYYrDeiGNISTShmr~~~~~-~eleirPRf  319 (602)
T KOG2291|consen  241 QVEENYELTHKGAKLKGPFSRLDYQKQRRTRGASAINSLKTVLPARAKDVYYRDEIGNISTSHMRIDPDK-TELEIRPRF  319 (602)
T ss_pred             EEEEEEEEEecceeccCCcchHhhhhcCCcCcchHHHHHHhhCCCccCceeeecccCcEehhhhcccCcc-ceEEeccCC
Confidence            9999999999999999999999999887668899999999999999999999999999999999999999 999999999


Q ss_pred             cccCCceeeEEEeecCCcccceeeccCCceE-EEEEecCCC-cceEEEEEEEEEEcCCCCcCCceeCCccee-eeeeeEE
Q 012183          326 PLFGGWRATFVIGYGLPLEDFLFESSDGRRY-LNFTFGCPL-VETVVDKLTIKVVLPEGAKGPSAVVPFPVE-QRLETKY  402 (469)
Q Consensus       326 PLfGGWk~~FtiGyn~pl~~~L~~~~~~~~y-L~vp~~~~~-~d~~~d~~~l~IiLPEGA~~i~v~~P~~v~-~~~~~~~  402 (469)
                      ||||||||+|++|||+|+++|||  .+|++| |+++|..++ +|++||+++++|+|||||+||++.+|++++ .++++++
T Consensus       320 PlFGGWkt~ftiGy~lP~~eyl~--~~g~ry~L~~~~~~~~~d~~V~dkl~ikvvLPEGak~i~i~tP~~is~~p~e~~~  397 (602)
T KOG2291|consen  320 PLFGGWKTNFTIGYNLPLEEYLF--SKGRRYALKIILIDHIFDDTVYDKLTIKVVLPEGAKDIEIDTPYEISRSPIELKY  397 (602)
T ss_pred             ccccCceeeEEEecCCcHHHHhh--ccCceeEEccccccCCCccceeeeEEEEEEccCCCcccccccceeeccCchhhhh
Confidence            99999999999999999999998  478888 999999865 667999999999999999999999999986 5699999


Q ss_pred             EeccCCCCeEEEEEeecCCcCCcceEEEEEEcChhhhhhhhHHHHHHHHHHHHHHhhheeeeeEEeC
Q 012183          403 SYLDVVGRTVVVLEKKNVVPVHNIPFQVYYTFKPIFMLAEPMMLASAFFLFFTACVAYLHVDLSIRK  469 (469)
Q Consensus       403 tyLDt~GRpvv~l~~~nlv~~h~~~~~V~Y~~~~~~~l~kPl~i~~~~f~~fl~~~~l~rid~sI~k  469 (469)
                      ||||+.||||++++++|+++.|+++|+|+|+|++..||+|||+|+++||++|++++++.|+||+|++
T Consensus       398 syLDt~GR~Vvv~ek~Nvv~~h~~~i~v~Y~f~~~sml~ePL~i~a~ffilf~~~i~y~~~d~~is~  464 (602)
T KOG2291|consen  398 SYLDTNGRPVVVLEKNNVVPDHNQDIVVHYTFSKSSMLQEPLLIIAAFFILFFAVIVYVRLDFNISS  464 (602)
T ss_pred             hhhhccCcEEEEEEccccCCCCCccEEEEEEechhHhhhccHHHHHHHHHHHHHHheeeecceeecc
Confidence            9999999999999999999999999999999999999999999999999999999999999999975



>PF04597 Ribophorin_I: Ribophorin I; InterPro: IPR007676 Ribophorin I is an essential subunit of oligosaccharyltransferase (OST), which is also known as dolichyl-diphosphooligosaccharide--protein glycosyltransferase, (2 Back     alignment and domain information
>PF08487 VIT: Vault protein inter-alpha-trypsin domain; InterPro: IPR013694 Inter-alpha-trypsin inhibitors (ITIs) consist of one light chain and a variable set of heavy chains Back     alignment and domain information
>smart00609 VIT Vault protein Inter-alpha-Trypsin domain Back     alignment and domain information
>PF09972 DUF2207: Predicted membrane protein (DUF2207); InterPro: IPR018702 This domain has no known function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query469
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 47.9 bits (113), Expect = 6e-06
 Identities = 51/320 (15%), Positives = 98/320 (30%), Gaps = 76/320 (23%)

Query: 40  RIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAATGKK-----KKK 94
           +I L+T   +V   L    T   S     +   P +V  L  L+ L    +         
Sbjct: 267 KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL-LLKYLDCRPQDLPREVLTT 325

Query: 95  TYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSES 154
               L++    + D     + +  V  + L T   ++L +L          P E  +   
Sbjct: 326 NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE---------PAEYRK--- 373

Query: 155 QLVYYRDSALILSPYHIKQQTTFIKIPSNKVESF----TRVEPTDRAGNEL-KYGPYE-D 208
               +   ++   P           IP+  +        + +      N+L KY   E  
Sbjct: 374 ---MFDRLSVF--PPS-------AHIPTILLSLIWFDVIKSDVMVVV-NKLHKYSLVEKQ 420

Query: 209 RPPYSYSPLLVHFE----NNNPFSVVEELVREVEIS---HWGNL--QITEQYKLAHAGAR 259
               + S   ++ E      N +++   +V    I       +L     +QY  +H G  
Sbjct: 421 PKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG-H 479

Query: 260 H-KGI--------FSRV--DY---QSK-----PTFSGVSSFKHLLARLPPRVHSVYYRDE 300
           H K I        F  V  D+   + K       ++   S  + L +L       +Y+  
Sbjct: 480 HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLK------FYKPY 533

Query: 301 IGNISTSHLRADSWKISELE 320
           I      +       ++ + 
Sbjct: 534 I----CDNDPKYERLVNAIL 549


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00