Citrus Sinensis ID: 012202
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 468 | 2.2.26 [Sep-21-2011] | |||||||
| Q95M17 | 472 | Acidic mammalian chitinas | yes | no | 0.741 | 0.735 | 0.304 | 9e-38 | |
| Q6RY07 | 473 | Acidic mammalian chitinas | no | no | 0.666 | 0.659 | 0.310 | 1e-36 | |
| Q9WTV1 | 381 | Chitinase-3-like protein | no | no | 0.664 | 0.816 | 0.316 | 7e-36 | |
| Q91XA9 | 473 | Acidic mammalian chitinas | yes | no | 0.666 | 0.659 | 0.307 | 8e-36 | |
| Q13231 | 466 | Chitotriosidase-1 OS=Homo | yes | no | 0.655 | 0.658 | 0.316 | 8e-36 | |
| Q5RBP6 | 410 | Chitinase-3-like protein | no | no | 0.658 | 0.751 | 0.313 | 1e-35 | |
| P36222 | 383 | Chitinase-3-like protein | no | no | 0.655 | 0.801 | 0.312 | 3e-35 | |
| Q9D7Q1 | 464 | Chitotriosidase-1 OS=Mus | no | no | 0.647 | 0.653 | 0.309 | 1e-34 | |
| Q9BZP6 | 476 | Acidic mammalian chitinas | no | no | 0.741 | 0.728 | 0.280 | 5e-34 | |
| Q29411 | 383 | Chitinase-3-like protein | no | no | 0.664 | 0.812 | 0.289 | 5e-32 |
| >sp|Q95M17|CHIA_BOVIN Acidic mammalian chitinase OS=Bos taurus GN=CHIA PE=1 SV=1 | Back alignment and function desciption |
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Score = 158 bits (399), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 187/374 (50%), Gaps = 27/374 (7%)
Query: 3 SKIIILVLHIFIFSESLPARAQTLIKVGYWDS---GDG-FPISDVNFALFTHLMCGFADV 58
+K+I L F+ + L + Q + W G G F +++ L THL+ FA +
Sbjct: 2 AKLIFLTGLAFLLNAQLGSAYQLVCYFSNWAQYRPGLGSFKPDNIDPCLCTHLIYAFAGM 61
Query: 59 NSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLLSIGGGNNPNYSTYSSMSASSSSRKS 118
S + ++ +D +S+F D +K KN + LL+IGG N + +++M A+ +RK+
Sbjct: 62 -SNSEITTIEWNDVALYSSFND-LKKKNSQLKILLAIGGWNF-GTAPFTAMVATPENRKT 118
Query: 119 FIDSSIKIARLYGFQGLDLSWN----SANTSRDKYNIGILFKEWRAAVDLEARNNSSQSQ 174
FI S IK YGF GLD W + S+DK+ +L +E R A + EA+ +++ +
Sbjct: 119 FISSVIKFLHQYGFDGLDFDWEYPGFRGSPSQDKHLFTVLVQETREAFEQEAKQ-TNKPR 177
Query: 175 LILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSKPTWTNFTGAHAALYD------ 228
L++TA VA + A Y + + QYL+++HVMT + +W +TG ++ LY
Sbjct: 178 LLVTAAVAAGISNIQAGYEIPQLSQYLDFIHVMTYDFHG-SWEGYTGENSPLYKYPTDTG 236
Query: 229 PNSVSNTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGIGAAAT-----GPALY 283
N+ N EY + W + G A+KL++ P YG + L +NGIGA + GP
Sbjct: 237 SNTYLNVEYAMNYWKKNGAPAEKLIIGFPAYGHNFILRDASNNGIGAPTSGAGPAGPYTR 296
Query: 284 DDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGKIWFGFDDVEAVRVKVSYAKEKK 343
+ G Y EI +K+ ++ + V Y G W G+D+V + R+K + KE
Sbjct: 297 EAGFWAYYEICAFLKD---GATEAWDDSQNVPYAYKGTEWVGYDNVNSFRIKAQWLKENN 353
Query: 344 LRGYYVWEVSYDHY 357
G VW + D +
Sbjct: 354 FGGAMVWAIDLDDF 367
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Degrades chitin and chitotriose. May participate in the defense against nematodes, fungi and other pathogens. Plays a role in T-helper cell type 2 (Th2) immune response. Contributes to the response to IL-13 and inflammation in response to IL-13. Stimulates chemokine production by pulmonary epithelial cells. Protects lung epithelial cells against apoptosis and promotes phosphorylation of AKT1. Its function in the inflammatory response and in protecting cells against apoptosis is inhibited by allosamidin, suggesting that the function of this protein depends on carbohydrate binding. Bos taurus (taxid: 9913) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 4 |
| >sp|Q6RY07|CHIA_RAT Acidic mammalian chitinase OS=Rattus norvegicus GN=Chia PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9WTV1|CH3L1_RAT Chitinase-3-like protein 1 OS=Rattus norvegicus GN=Chi3l1 PE=2 SV=3 | Back alignment and function description |
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| >sp|Q91XA9|CHIA_MOUSE Acidic mammalian chitinase OS=Mus musculus GN=Chia PE=1 SV=2 | Back alignment and function description |
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| >sp|Q13231|CHIT1_HUMAN Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q5RBP6|CH3L1_PONAB Chitinase-3-like protein 1 OS=Pongo abelii GN=CHI3L1 PE=2 SV=1 | Back alignment and function description |
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| >sp|P36222|CH3L1_HUMAN Chitinase-3-like protein 1 OS=Homo sapiens GN=CHI3L1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9D7Q1|CHIT1_MOUSE Chitotriosidase-1 OS=Mus musculus GN=Chit1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9BZP6|CHIA_HUMAN Acidic mammalian chitinase OS=Homo sapiens GN=CHIA PE=1 SV=1 | Back alignment and function description |
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| >sp|Q29411|CH3L1_PIG Chitinase-3-like protein 1 OS=Sus scrofa GN=CHI3L1 PE=1 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 468 | ||||||
| 224142425 | 763 | predicted protein [Populus trichocarpa] | 0.980 | 0.601 | 0.569 | 1e-136 | |
| 356558668 | 909 | PREDICTED: uncharacterized protein LOC10 | 0.955 | 0.491 | 0.555 | 1e-135 | |
| 359497026 | 738 | PREDICTED: G-type lectin S-receptor-like | 0.957 | 0.607 | 0.518 | 1e-120 | |
| 359484771 | 781 | PREDICTED: G-type lectin S-receptor-like | 0.935 | 0.560 | 0.482 | 1e-114 | |
| 359497679 | 359 | PREDICTED: chitotriosidase-1-like [Vitis | 0.764 | 0.997 | 0.562 | 1e-102 | |
| 296088199 | 1130 | unnamed protein product [Vitis vinifera] | 0.891 | 0.369 | 0.471 | 1e-101 | |
| 224142429 | 375 | predicted protein [Populus trichocarpa] | 0.762 | 0.952 | 0.520 | 3e-94 | |
| 255565055 | 721 | conserved hypothetical protein [Ricinus | 0.75 | 0.486 | 0.504 | 6e-90 | |
| 147787796 | 658 | hypothetical protein VITISV_036051 [Viti | 0.824 | 0.586 | 0.449 | 2e-87 | |
| 255565049 | 371 | chitinase, putative [Ricinus communis] g | 0.773 | 0.975 | 0.466 | 8e-85 |
| >gi|224142425|ref|XP_002324558.1| predicted protein [Populus trichocarpa] gi|222865992|gb|EEF03123.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/465 (56%), Positives = 333/465 (71%), Gaps = 6/465 (1%)
Query: 1 MASKIIILVL-HIFIFSESLPARAQTLIKVGYWDSGDGFPISDVNFALFTHLMCGFADVN 59
MAS+I I++L H+F+ + A+AQ IK GYW SG PISD+N L+THL+C FA +N
Sbjct: 1 MASRITIIILFHVFLSLKLHTAKAQAWIKAGYWFSGSDLPISDINSTLYTHLICAFAGLN 60
Query: 60 STTYELSLSPSDEEQFSNFTDTVKIKNPSITTLLSIGGGNNPNYSTYSSMSASSSSRKSF 119
S++Y LS+S SD++ FS FT+TVK KNPSITTLLSIGGG+ NYST S+M +S+ RKSF
Sbjct: 61 SSSYHLSISSSDDQFFSAFTNTVKQKNPSITTLLSIGGGS-ANYSTLSAMVGNSTYRKSF 119
Query: 120 IDSSIKIARLYGFQGLDLSWNSANTSRDKYNIGILFKEWRAAVDLEARNNSSQSQLILTA 179
ID SIKIAR YGFQGLD SW SANTS + ++G LF+EWRAA+ LE R SS S+LILTA
Sbjct: 120 IDDSIKIARHYGFQGLDFSWVSANTSDNMDSMGTLFEEWRAAIALE-RRKSSLSELILTA 178
Query: 180 KVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSKPTWTNFTGAHAALYDPNSVSNTEYGI 239
V +SP + ++P+DSIR+ LNW HV+ Y PTW FT A AALYDP+S NT++GI
Sbjct: 179 AVQYSPRLDSGSFPIDSIRKNLNWTHVLAFDYYMPTWAKFTAAFAALYDPDSDVNTDFGI 238
Query: 240 TEWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGIGAAATGPALYDDGLVTYKEIKNHIKN 299
WI GL A KLVL LPFYG+AW L ++ IGA ATGPA+ +DG ++YK+I N+ K
Sbjct: 239 AAWINGGLPASKLVLGLPFYGYAWKLANLNESAIGAPATGPAVTEDGDLSYKDINNYFKT 298
Query: 300 YGPNVRVMYNSTYVVNYCSIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHYWM 359
G V +YNSTYVVNY +G W FD V+ VR KVSYAKEK L GY VWEVSYD W+
Sbjct: 299 NG-RVNPIYNSTYVVNYGIVGPAWISFDGVDVVRTKVSYAKEKALLGYVVWEVSYDDNWV 357
Query: 360 LSRAAAEEDNKNRQNKRLLWAIVLPITAACILLIGFLLYYFCWMKTLKLKAKASKDSANS 419
LS+A + ++ R R+L I+L TAA I+L+G L +YF + LK K+K +K N+
Sbjct: 358 LSQAGVDLKHEGRPKSRIL-IIILTTTAAVIILLG-LAFYFIRNRILKSKSKETKLKVNN 415
Query: 420 QADAGDFNRTDPDLREYSLADIEAATDRLSIENKLGEGGYGPVYK 464
A AGDF+ +PDL YSLADIE ATD+ + ENKLGEGG+GPVYK
Sbjct: 416 AAAAGDFDSNNPDLIVYSLADIEKATDQFAFENKLGEGGFGPVYK 460
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356558668|ref|XP_003547625.1| PREDICTED: uncharacterized protein LOC100787480 [Glycine max] | Back alignment and taxonomy information |
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| >gi|359497026|ref|XP_003635401.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410-like, partial [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359484771|ref|XP_003633158.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359497679|ref|XP_003635605.1| PREDICTED: chitotriosidase-1-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296088199|emb|CBI35714.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224142429|ref|XP_002324560.1| predicted protein [Populus trichocarpa] gi|222865994|gb|EEF03125.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255565055|ref|XP_002523520.1| conserved hypothetical protein [Ricinus communis] gi|223537227|gb|EEF38859.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|147787796|emb|CAN60684.1| hypothetical protein VITISV_036051 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255565049|ref|XP_002523517.1| chitinase, putative [Ricinus communis] gi|223537224|gb|EEF38856.1| chitinase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 468 | ||||||
| TAIR|locus:2134025 | 379 | ChiC "class V chitinase" [Arab | 0.771 | 0.952 | 0.385 | 2.7e-68 | |
| TAIR|locus:2134015 | 398 | AT4G19800 [Arabidopsis thalian | 0.717 | 0.844 | 0.379 | 6e-64 | |
| TAIR|locus:2134030 | 366 | AT4G19820 [Arabidopsis thalian | 0.724 | 0.926 | 0.363 | 3.9e-60 | |
| TAIR|locus:2133940 | 362 | AT4G19750 [Arabidopsis thalian | 0.726 | 0.939 | 0.376 | 9.3e-59 | |
| TAIR|locus:2133955 | 369 | AT4G19760 [Arabidopsis thalian | 0.726 | 0.921 | 0.374 | 1.4e-57 | |
| TAIR|locus:2134010 | 363 | AT4G19720 [Arabidopsis thalian | 0.705 | 0.909 | 0.351 | 2.2e-50 | |
| TAIR|locus:2134020 | 332 | AT4G19730 [Arabidopsis thalian | 0.653 | 0.921 | 0.356 | 1.3e-45 | |
| TAIR|locus:2133970 | 261 | AT4G19770 [Arabidopsis thalian | 0.510 | 0.915 | 0.388 | 6.6e-42 | |
| UNIPROTKB|G1TJP4 | 388 | CHI3L1 "Uncharacterized protei | 0.664 | 0.801 | 0.298 | 8.3e-35 | |
| UNIPROTKB|F1MH27 | 472 | CHIA "Acidic mammalian chitina | 0.741 | 0.735 | 0.286 | 1.1e-34 |
| TAIR|locus:2134025 ChiC "class V chitinase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 141/366 (38%), Positives = 213/366 (58%)
Query: 2 ASKIIILVLHIFIFSESLPARAQTLIKVGYWDSGDGFPISDVNFALFTHLMCGFADVNST 61
++K+I L++ I F + AQT++K YW FP++D++ +LFTHL C FAD+NS
Sbjct: 3 STKLISLIVSITFFLTLQCSMAQTVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQ 62
Query: 62 TYELSLSPSDEEQFSNFTDTVKIKNPSITTLLSIGGGNNPNYXXXXXXXXXXXXXXXXXX 121
T ++++S +++ +FS FT TV+ +NPS+ TLLSIGGG +
Sbjct: 63 TNQVTVSSANQPKFSTFTQTVQRRNPSVKTLLSIGGGI-ADKTAYASMASNPTSRKSFID 121
Query: 122 XXIKIARLYGFQGLDLSWNSANTSRDKYNIGILFKEWRAAVDLEARNNSSQSQLILTAKV 181
I++AR YGF GLDL W +++ + N G L +EWR+AV EA ++S + +L+L A V
Sbjct: 122 SSIRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREWRSAVVAEA-SSSGKPRLLLAAAV 180
Query: 182 AHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSKPTWTNFTGAHAALYDP-NSVSNTEYGIT 240
+S + YPV ++ L+WV++M + P W+ TG AAL+DP N+ + + G
Sbjct: 181 FYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGPGWSRVTGPPAALFDPSNAGPSGDAGTR 240
Query: 241 EWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGIGAAATGPALYDDGLVTYKEIKNHIKNY 300
WI+ GL A K VL P+YG+AW L + A TG A+ DG + Y +I+ I +
Sbjct: 241 SWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDN 300
Query: 301 GPNVRVMYNSTYVVNYCSIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHYWML 360
G +YNST V +YC G W G+DD +++ KV YAK++ L GY+ W V D L
Sbjct: 301 GATT--VYNSTVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGL 358
Query: 361 SRAAAE 366
SRAA++
Sbjct: 359 SRAASQ 364
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| TAIR|locus:2134015 AT4G19800 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2134030 AT4G19820 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2133940 AT4G19750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2133955 AT4G19760 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2134010 AT4G19720 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2134020 AT4G19730 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2133970 AT4G19770 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G1TJP4 CHI3L1 "Uncharacterized protein" [Oryctolagus cuniculus (taxid:9986)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1MH27 CHIA "Acidic mammalian chitinase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1.14 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00005601001 | SubName- Full=Chromosome undetermined scaffold_155, whole genome shotgun sequence; (467 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 468 | |||
| cd02879 | 299 | cd02879, GH18_plant_chitinase_class_V, The class V | 1e-116 | |
| smart00636 | 334 | smart00636, Glyco_18, Glyco_18 domain | 4e-80 | |
| pfam00704 | 325 | pfam00704, Glyco_hydro_18, Glycosyl hydrolases fam | 5e-73 | |
| cd02872 | 362 | cd02872, GH18_chitolectin_chitotriosidase, This co | 4e-60 | |
| cd06548 | 322 | cd06548, GH18_chitinase, The GH18 (glycosyl hydrol | 1e-34 | |
| COG3325 | 441 | COG3325, ChiA, Chitinase [Carbohydrate transport a | 1e-31 | |
| cd02873 | 413 | cd02873, GH18_IDGF, The IDGF's (imaginal disc grow | 5e-31 | |
| cd00598 | 210 | cd00598, GH18_chitinase-like, The GH18 (glycosyl h | 3e-23 | |
| cd06545 | 253 | cd06545, GH18_3CO4_chitinase, The Bacteroides thet | 5e-10 | |
| cd02874 | 313 | cd02874, GH18_CFLE_spore_hydrolase, Cortical fragm | 2e-05 | |
| COG3858 | 423 | COG3858, COG3858, Predicted glycosyl hydrolase [Ge | 3e-05 |
| >gnl|CDD|119358 cd02879, GH18_plant_chitinase_class_V, The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes | Back alignment and domain information |
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Score = 343 bits (883), Expect = e-116
Identities = 149/343 (43%), Positives = 205/343 (59%), Gaps = 49/343 (14%)
Query: 24 QTLIKVGYWDSGDG-FPISDVNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTV 82
T++K GYW + FP S+++ +LFTHL FAD++ +TYE+ +SPSDE +FS FT+TV
Sbjct: 1 STIVKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVISPSDESEFSTFTETV 60
Query: 83 KIKNPSITTLLSIGGGNNPNYSTYSSMSASSSSRKSFIDSSIKIARLYGFQGLDLSWNSA 142
K KNPS+ TLLSIGGG + + S +++M++ ++RK+FI+SSIK+AR YGF GLDL W
Sbjct: 61 KRKNPSVKTLLSIGGGGS-DSSAFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFP 119
Query: 143 NTSRDKYNIGILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAA----YPVDSIR 198
++ + N G L +EWRAAV EAR+ S + L+LTA V SP+ + YP+++I
Sbjct: 120 SSQVEMENFGKLLEEWRAAVKDEARS-SGRPPLLLTAAVYFSPILFLSDDSVSYPIEAIN 178
Query: 199 QYLNWVHVMTTGYSKPTWTNFTGAHAALYDPNSVSNTEYGITEWIEEGLSADKLVLCLPF 258
+ L+WV+VM Y +N TG AALYDPNS +T+YGI WI+ G+ A KLVL LP
Sbjct: 179 KNLDWVNVMAYDYYGSWESNTTGPAAALYDPNSNVSTDYGIKSWIKAGVPAKKLVLGLPL 238
Query: 259 YGFAWTLVKPEDNGIGAAATGPALYDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCS 318
YG AWTL Y++T V +Y
Sbjct: 239 YGRAWTL------------------------------------------YDTTTVSSYVY 256
Query: 319 IGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHYWMLS 361
G W G+DDV+++ VKV YAK+K L GY+ W V YD LS
Sbjct: 257 AGTTWIGYDDVQSIAVKVKYAKQKGLLGYFAWAVGYDDNNWLS 299
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The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. Length = 299 |
| >gnl|CDD|214753 smart00636, Glyco_18, Glyco_18 domain | Back alignment and domain information |
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| >gnl|CDD|216071 pfam00704, Glyco_hydro_18, Glycosyl hydrolases family 18 | Back alignment and domain information |
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| >gnl|CDD|119351 cd02872, GH18_chitolectin_chitotriosidase, This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases | Back alignment and domain information |
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| >gnl|CDD|119365 cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites | Back alignment and domain information |
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| >gnl|CDD|225862 COG3325, ChiA, Chitinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
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| >gnl|CDD|119352 cd02873, GH18_IDGF, The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster | Back alignment and domain information |
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| >gnl|CDD|119349 cd00598, GH18_chitinase-like, The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods | Back alignment and domain information |
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| >gnl|CDD|119362 cd06545, GH18_3CO4_chitinase, The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas | Back alignment and domain information |
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| >gnl|CDD|119353 cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination | Back alignment and domain information |
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| >gnl|CDD|226376 COG3858, COG3858, Predicted glycosyl hydrolase [General function prediction only] | Back alignment and domain information |
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Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 468 | |||
| cd02879 | 299 | GH18_plant_chitinase_class_V The class V plant chi | 100.0 | |
| cd02872 | 362 | GH18_chitolectin_chitotriosidase This conserved do | 100.0 | |
| cd02873 | 413 | GH18_IDGF The IDGF's (imaginal disc growth factors | 100.0 | |
| smart00636 | 334 | Glyco_18 Glycosyl hydrolase family 18. | 100.0 | |
| KOG2806 | 432 | consensus Chitinase [Carbohydrate transport and me | 100.0 | |
| COG3325 | 441 | ChiA Chitinase [Carbohydrate transport and metabol | 100.0 | |
| cd02878 | 345 | GH18_zymocin_alpha Zymocin, alpha subunit. Zymocin | 100.0 | |
| cd06548 | 322 | GH18_chitinase The GH18 (glycosyl hydrolases, fami | 100.0 | |
| PF00704 | 343 | Glyco_hydro_18: Glycosyl hydrolases family 18; Int | 100.0 | |
| cd02876 | 318 | GH18_SI-CLP Stabilin-1 interacting chitinase-like | 100.0 | |
| cd02875 | 358 | GH18_chitobiase Chitobiase (also known as di-N-ace | 100.0 | |
| cd02874 | 313 | GH18_CFLE_spore_hydrolase Cortical fragment-lytic | 100.0 | |
| cd06549 | 298 | GH18_trifunctional GH18 domain of an uncharacteriz | 100.0 | |
| cd06545 | 253 | GH18_3CO4_chitinase The Bacteroides thetaiotaomicr | 100.0 | |
| cd00598 | 210 | GH18_chitinase-like The GH18 (glycosyl hydrolase, | 100.0 | |
| COG3858 | 423 | Predicted glycosyl hydrolase [General function pre | 100.0 | |
| cd06546 | 256 | GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase | 99.97 | |
| cd06544 | 253 | GH18_narbonin Narbonin is a plant 2S protein from | 99.97 | |
| cd02871 | 312 | GH18_chitinase_D-like GH18 domain of Chitinase D ( | 99.96 | |
| KOG2091 | 392 | consensus Predicted member of glycosyl hydrolase f | 99.94 | |
| cd06542 | 255 | GH18_EndoS-like Endo-beta-N-acetylglucosaminidases | 99.89 | |
| cd02877 | 280 | GH18_hevamine_XipI_class_III This conserved domain | 99.85 | |
| cd06543 | 294 | GH18_PF-ChiA-like PF-ChiA is an uncharacterized ch | 99.81 | |
| COG3469 | 332 | Chitinase [Carbohydrate transport and metabolism] | 99.74 | |
| KOG4701 | 568 | consensus Chitinase [Cell wall/membrane/envelope b | 99.34 | |
| cd06547 | 339 | GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENG | 98.64 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 98.17 | |
| PF03644 | 311 | Glyco_hydro_85: Glycosyl hydrolase family 85 ; Int | 98.1 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 98.08 | |
| PF11340 | 181 | DUF3142: Protein of unknown function (DUF3142); In | 97.6 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 97.33 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 96.89 | |
| KOG2331 | 526 | consensus Predicted glycosylhydrolase [General fun | 96.38 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 96.3 | |
| PF14883 | 294 | GHL13: Hypothetical glycosyl hydrolase family 13 | 94.5 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 94.12 | |
| TIGR01370 | 315 | cysRS possible cysteinyl-tRNA synthetase, Methanoc | 92.18 | |
| PF04478 | 154 | Mid2: Mid2 like cell wall stress sensor; InterPro: | 90.5 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 90.06 | |
| COG1649 | 418 | Uncharacterized protein conserved in bacteria [Fun | 89.89 | |
| cd02810 | 289 | DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) | 88.88 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 88.77 | |
| COG1306 | 400 | Uncharacterized conserved protein [Function unknow | 87.21 | |
| PF01102 | 122 | Glycophorin_A: Glycophorin A; InterPro: IPR001195 | 86.83 | |
| TIGR02103 | 898 | pullul_strch alpha-1,6-glucosidases, pullulanase-t | 86.71 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 85.8 | |
| cd02930 | 353 | DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-bindin | 84.91 | |
| TIGR02402 | 542 | trehalose_TreZ malto-oligosyltrehalose trehalohydr | 84.67 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 84.54 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 84.19 | |
| PF15102 | 146 | TMEM154: TMEM154 protein family | 83.91 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 83.57 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 83.16 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 82.35 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 82.25 | |
| cd04734 | 343 | OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN | 82.19 | |
| PLN02960 | 897 | alpha-amylase | 82.0 | |
| PRK14581 | 672 | hmsF outer membrane N-deacetylase; Provisional | 81.31 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 81.19 | |
| PF02439 | 38 | Adeno_E3_CR2: Adenovirus E3 region protein CR2; In | 80.48 |
| >cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-61 Score=462.22 Aligned_cols=288 Identities=51% Similarity=0.916 Sum_probs=260.6
Q ss_pred cEEEEEEcCCC-CCCCCCCCCCCCcEEEEEeEEeeCCCcEEecCCcchHHHHHHHHHHHhhCCCcEEEEEEeCCCCCCCc
Q 012202 26 LIKVGYWDSGD-GFPISDVNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLLSIGGGNNPNYS 104 (468)
Q Consensus 26 ~~v~gY~~~~~-~~~~~~~~~~~~thi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~kvllsigG~~~~~~~ 104 (468)
-+++|||++|. .+.+++++.++||||+|+|+.++++++.+...+.+...+..+.+.+|+++|++|+++|||||+. ++.
T Consensus 3 ~~~~~Y~~~w~~~~~~~~i~~~~~THi~yaf~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~lkvlisiGG~~~-~s~ 81 (299)
T cd02879 3 IVKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVISPSDESEFSTFTETVKRKNPSVKTLLSIGGGGS-DSS 81 (299)
T ss_pred eEEEEEECCCCCCCChhHCCcccCCEEEEEEEEecCCCCEEeeccccHHHHHHHHHHHHHhCCCCeEEEEEeCCCC-CCc
Confidence 46899999988 8999999999999999999999998877877766677778888889999999999999999986 467
Q ss_pred cchHhhcChhhHHHHHHHHHHHHHHcCCCeeeeeccCCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCceEEEEEEeccC
Q 012202 105 TYSSMSASSSSRKSFIDSSIKIARLYGFQGLDLSWNSANTSRDKYNIGILFKEWRAAVDLEARNNSSQSQLILTAKVAHS 184 (468)
Q Consensus 105 ~~~~~~~~~~~r~~fi~~l~~~l~~~~~DGvdiD~E~~~~~~~~~~~~~ll~~lr~~l~~~~~~~~~~~~~~ls~a~~~~ 184 (468)
.|+.++++++.|++|++++++++++|+|||||||||+|..++|+++|+.||++||++|++..+. .++..++||+++|+.
T Consensus 82 ~fs~~~~~~~~R~~fi~siv~~l~~~~fDGidiDWE~P~~~~d~~n~~~ll~elr~~l~~~~~~-~~~~~~~ls~av~~~ 160 (299)
T cd02879 82 AFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFPSSQVEMENFGKLLEEWRAAVKDEARS-SGRPPLLLTAAVYFS 160 (299)
T ss_pred hhhHHhCCHHHHHHHHHHHHHHHHHhCCCceeecccCCCChhHHHHHHHHHHHHHHHHHHHhhc-cCCCcEEEEeecccc
Confidence 8999999999999999999999999999999999999988789999999999999999976543 343449999999876
Q ss_pred ccc----ccCCCChhHHhccccEEeeecccccCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCceEEecceeE
Q 012202 185 PLS----TAAAYPVDSIRQYLNWVHVMTTGYSKPTWTNFTGAHAALYDPNSVSNTEYGITEWIEEGLSADKLVLCLPFYG 260 (468)
Q Consensus 185 ~~~----~~~~~~~~~l~~~~D~v~lm~yd~~~~~~~~~~~~~apl~~~~~~~~~~~~~~~~~~~g~~~~Ki~lglp~yG 260 (468)
+.. ....||++++.++|||||||+||+||+|....++|+|||+.+....+++.+|+.|++.|+|++||+||+|+||
T Consensus 161 ~~~~~~~~~~~yd~~~l~~~vD~i~vMtYD~~g~~~~~~~~~~a~l~~~~~~~~~~~~v~~~~~~g~p~~KlvlGvp~YG 240 (299)
T cd02879 161 PILFLSDDSVSYPIEAINKNLDWVNVMAYDYYGSWESNTTGPAAALYDPNSNVSTDYGIKSWIKAGVPAKKLVLGLPLYG 240 (299)
T ss_pred hhhccccccccCCHHHHHhhCCEEEEEeecccCCCCCCCCCCCCcCCCCCCCCCHHHHHHHHHHcCCCHHHEEEEecccc
Confidence 654 3446899999999999999999999999777789999999877778999999999999999999999999999
Q ss_pred EeeeecCCCCCCCCCccCCCCCCCCccccHHHHHHHhhcCCCCeEEEEecceeeEEEEeCCEEEEEcCHHHHHHHHHHhh
Q 012202 261 FAWTLVKPEDNGIGAAATGPALYDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGKIWFGFDDVEAVRVKVSYAK 340 (468)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~~~~~~s~~~k~~~~~ 340 (468)
|.|++ ||+.+.++|.+.+.+||+|||++|++.|++|++
T Consensus 241 r~~~~------------------------------------------~D~~~~~~y~~~~~~wi~ydd~~Si~~K~~~a~ 278 (299)
T cd02879 241 RAWTL------------------------------------------YDTTTVSSYVYAGTTWIGYDDVQSIAVKVKYAK 278 (299)
T ss_pred ccccc------------------------------------------cCCCcceEEEEECCEEEEeCCHHHHHHHHHHHH
Confidence 99952 788888999998899999999999999999999
Q ss_pred hcCcccEEEEeeccCcc
Q 012202 341 EKKLRGYYVWEVSYDHY 357 (468)
Q Consensus 341 ~~~L~G~~~~~l~~d~~ 357 (468)
+.+|+|+++|++++|+.
T Consensus 279 ~~~lgGv~~W~l~~Dd~ 295 (299)
T cd02879 279 QKGLLGYFAWAVGYDDN 295 (299)
T ss_pred hCCCCeEEEEEeecCCc
Confidence 99999999999999984
|
The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. |
| >cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases | Back alignment and domain information |
|---|
| >cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster | Back alignment and domain information |
|---|
| >smart00636 Glyco_18 Glycosyl hydrolase family 18 | Back alignment and domain information |
|---|
| >KOG2806 consensus Chitinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG3325 ChiA Chitinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd02878 GH18_zymocin_alpha Zymocin, alpha subunit | Back alignment and domain information |
|---|
| >cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites | Back alignment and domain information |
|---|
| >PF00704 Glyco_hydro_18: Glycosyl hydrolases family 18; InterPro: IPR001223 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome | Back alignment and domain information |
|---|
| >cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes | Back alignment and domain information |
|---|
| >cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination | Back alignment and domain information |
|---|
| >cd06549 GH18_trifunctional GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain | Back alignment and domain information |
|---|
| >cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas | Back alignment and domain information |
|---|
| >cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods | Back alignment and domain information |
|---|
| >COG3858 Predicted glycosyl hydrolase [General function prediction only] | Back alignment and domain information |
|---|
| >cd06546 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii | Back alignment and domain information |
|---|
| >cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L | Back alignment and domain information |
|---|
| >cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) | Back alignment and domain information |
|---|
| >KOG2091 consensus Predicted member of glycosyl hydrolase family 18 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins | Back alignment and domain information |
|---|
| >cd02877 GH18_hevamine_XipI_class_III This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain | Back alignment and domain information |
|---|
| >cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain | Back alignment and domain information |
|---|
| >COG3469 Chitinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >KOG4701 consensus Chitinase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins | Back alignment and domain information |
|---|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF03644 Glyco_hydro_85: Glycosyl hydrolase family 85 ; InterPro: IPR005201 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
| >PF11340 DUF3142: Protein of unknown function (DUF3142); InterPro: IPR021488 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
| >KOG2331 consensus Predicted glycosylhydrolase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF14883 GHL13: Hypothetical glycosyl hydrolase family 13 | Back alignment and domain information |
|---|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type | Back alignment and domain information |
|---|
| >PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region | Back alignment and domain information |
|---|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
| >COG1649 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain | Back alignment and domain information |
|---|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG1306 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane | Back alignment and domain information |
|---|
| >TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type | Back alignment and domain information |
|---|
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
| >cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain | Back alignment and domain information |
|---|
| >TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase | Back alignment and domain information |
|---|
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
| >PF15102 TMEM154: TMEM154 protein family | Back alignment and domain information |
|---|
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
| >cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3 | Back alignment and domain information |
|---|
| >PLN02960 alpha-amylase | Back alignment and domain information |
|---|
| >PRK14581 hmsF outer membrane N-deacetylase; Provisional | Back alignment and domain information |
|---|
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host [] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 468 | ||||
| 3aqu_A | 356 | Crystal Structure Of A Class V Chitinase From Arabi | 6e-68 | ||
| 3alg_A | 353 | Crystal Structure Of Class V Chitinase (E115q Mutan | 7e-68 | ||
| 3alf_A | 353 | Crystal Structure Of Class V Chitinase From Nicotia | 9e-68 | ||
| 1guv_A | 366 | Structure Of Human Chitotriosidase Length = 366 | 4e-31 | ||
| 1hki_A | 365 | Crystal Structure Of Human Chitinase In Complex Wit | 9e-31 | ||
| 1hkk_A | 364 | High Resoultion Crystal Structure Of Human Chitinas | 1e-30 | ||
| 1lg1_A | 365 | Crystal Structure Of Human Chitotriosidase In Compl | 1e-30 | ||
| 1waw_A | 445 | Specificity And Affinity Of Natural Product Cyclope | 2e-30 | ||
| 1hjv_A | 362 | Crystal Structure Of Hcgp-39 In Complex With Chitin | 3e-30 | ||
| 3fxy_A | 395 | Acidic Mammalian Chinase, Catalytic Domain Length = | 4e-30 | ||
| 2ybt_A | 381 | Crystal Structure Of Human Acidic Chitinase In Comp | 5e-30 | ||
| 1syt_A | 361 | Crystal Structure Of Signalling Protein From Goat S | 3e-26 | ||
| 1ljy_A | 361 | Crystal Structure Of A Novel Regulatory 40 Kda Mamm | 4e-26 | ||
| 1zbv_A | 361 | Crystal Structure Of The Goat Signalling Protein (S | 7e-26 | ||
| 2pi6_A | 361 | Crystal Structure Of The Sheep Signalling Glycoprot | 8e-26 | ||
| 1sr0_A | 361 | Crystal Structure Of Signalling Protein From Sheep( | 8e-26 | ||
| 1xhg_A | 361 | Crystal Structure Of A 40 Kda Signalling Protein Fr | 2e-25 | ||
| 2esc_A | 361 | Crystal Structure Of A 40 Kda Protective Signalling | 3e-25 | ||
| 1owq_A | 361 | Crystal Structure Of A 40 Kda Signalling Protein (S | 4e-25 | ||
| 1tfv_A | 361 | Crystal Structure Of A Buffalo Signaling Glycoprote | 8e-25 | ||
| 1e9l_A | 377 | The Crystal Structure Of Novel Mammalian Lectin Ym1 | 6e-23 | ||
| 4ay1_A | 365 | Human Ykl-39 Is A Pseudo-Chitinase With Retained Ch | 1e-21 | ||
| 1itx_A | 419 | Catalytic Domain Of Chitinase A1 From Bacillus Circ | 2e-13 | ||
| 1w9p_A | 433 | Specificity And Affinity Of Natural Product Cyclope | 2e-12 | ||
| 1wno_A | 395 | Crystal Structure Of A Native Chitinase From Asperg | 4e-12 | ||
| 1ll6_A | 392 | Structure Of The D169n Mutant Of C. Immitis Chitina | 1e-11 | ||
| 1ll7_A | 392 | Structure Of The E171q Mutant Of C. Immitis Chitina | 1e-11 | ||
| 1d2k_A | 392 | C. Immitis Chitinase 1 At 2.2 Angstroms Resolution | 1e-11 | ||
| 3g6l_A | 406 | The Crystal Structure Of A Chitinase Crchi1 From Th | 1e-10 | ||
| 1jnd_A | 420 | Crystal Structure Of Imaginal Disc Growth Factor-2 | 3e-09 | ||
| 1rd6_A | 563 | Crystal Structure Of S. Marcescens Chitinase A Muta | 3e-09 | ||
| 2wly_A | 548 | Chitinase A From Serratia Marcescens Atcc990 In Com | 4e-09 | ||
| 2wk2_A | 540 | Chitinase A From Serratia Marcescens Atcc990 In Com | 4e-09 | ||
| 1ctn_A | 540 | Crystal Structure Of A Bacterial Chitinase At 2.3 A | 4e-09 | ||
| 1k9t_A | 540 | Chitinase A Complexed With Tetra-N-Acetylchitotrios | 5e-09 | ||
| 1eib_A | 540 | Crystal Structure Of Chitinase A Mutant D313a Compl | 5e-09 | ||
| 1ehn_A | 540 | Crystal Structure Of Chitinase A Mutant E315q Compl | 5e-09 | ||
| 1edq_A | 540 | Crystal Structure Of Chitinase A From S. Marcescens | 6e-09 | ||
| 1ffr_A | 540 | Crystal Structure Of Chitinase A Mutant Y390f Compl | 6e-09 | ||
| 3qok_A | 420 | Crystal Structure Of Putative Chitinase Ii From Kle | 9e-09 | ||
| 1nh6_A | 540 | Structure Of S. Marcescens Chitinase A, E315l, Comp | 1e-08 | ||
| 1ur9_A | 499 | Interactions Of A Family 18 Chitinase With The Desi | 2e-08 | ||
| 1e6n_B | 499 | Chitinase B From Serratia Marcescens Inactive Mutan | 3e-08 | ||
| 3ars_A | 584 | Crystal Structure Analysis Of Chitinase A From Vibr | 3e-08 | ||
| 1ogb_A | 499 | Chitinase B From Serratia Marcescens Mutant D142n L | 3e-08 | ||
| 1e15_A | 499 | Chitinase B From Serratia Marcescens Length = 499 | 3e-08 | ||
| 1e6z_A | 498 | Chitinase B From Serratia Marcescens Wildtype In Co | 3e-08 | ||
| 1h0g_A | 499 | Complex Of A Chitinase With The Natural Product Cyc | 3e-08 | ||
| 1goi_A | 499 | Crystal Structure Of The D140n Mutant Of Chitinase | 1e-07 | ||
| 3b8s_A | 584 | Crystal Structure Of Wild-Type Chitinase A From Vib | 3e-07 | ||
| 3b9a_A | 584 | Crystal Structure Of Vibrio Harveyi Chitinase A Com | 4e-07 | ||
| 1kfw_A | 435 | Structure Of Catalytic Domain Of Psychrophilic Chit | 5e-06 |
| >pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana Length = 356 | Back alignment and structure |
|
| >pdb|3ALG|A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 Length = 353 | Back alignment and structure |
| >pdb|3ALF|A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum Length = 353 | Back alignment and structure |
| >pdb|1GUV|A Chain A, Structure Of Human Chitotriosidase Length = 366 | Back alignment and structure |
| >pdb|1HKI|A Chain A, Crystal Structure Of Human Chitinase In Complex With Glucoallosamidin B Length = 365 | Back alignment and structure |
| >pdb|1HKK|A Chain A, High Resoultion Crystal Structure Of Human Chitinase In Complex With Allosamidin Length = 364 | Back alignment and structure |
| >pdb|1LG1|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With Chitobiose Length = 365 | Back alignment and structure |
| >pdb|1WAW|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitor Argadin Against Human Chitinase Length = 445 | Back alignment and structure |
| >pdb|1HJV|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin Tetramer Length = 362 | Back alignment and structure |
| >pdb|3FXY|A Chain A, Acidic Mammalian Chinase, Catalytic Domain Length = 395 | Back alignment and structure |
| >pdb|2YBT|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex With Bisdionin C Length = 381 | Back alignment and structure |
| >pdb|1SYT|A Chain A, Crystal Structure Of Signalling Protein From Goat Spg-40 In The Presense Of N,n',n''-triacetyl-chitotriose At 2.6a Resolution Length = 361 | Back alignment and structure |
| >pdb|1LJY|A Chain A, Crystal Structure Of A Novel Regulatory 40 Kda Mammary Gland Protein (Mgp-40) Secreted During Involution Length = 361 | Back alignment and structure |
| >pdb|1ZBV|A Chain A, Crystal Structure Of The Goat Signalling Protein (Spg-40) Complexed With A Designed Peptide Trp-Pro-Trp At 3.2a Resolution Length = 361 | Back alignment and structure |
| >pdb|2PI6|A Chain A, Crystal Structure Of The Sheep Signalling Glycoprotein (Sps-40) Complex With 2-Methyl-2-4-Pentanediol At 1.65a Resolution Reveals Specific Binding Characteristics Of Sps-40 Length = 361 | Back alignment and structure |
| >pdb|1SR0|A Chain A, Crystal Structure Of Signalling Protein From Sheep(Sps-40) At 3.0a Resolution Using Crystal Grown In The Presence Of Polysaccharides Length = 361 | Back alignment and structure |
| >pdb|1XHG|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein From Porcine (spp-40) At 2.89a Resolution Length = 361 | Back alignment and structure |
| >pdb|2ESC|A Chain A, Crystal Structure Of A 40 Kda Protective Signalling Protein From Bovine (Spc-40) At 2.1 A Resolution Length = 361 | Back alignment and structure |
| >pdb|1OWQ|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein (Spc-40) Secreted During Involution Length = 361 | Back alignment and structure |
| >pdb|1TFV|A Chain A, Crystal Structure Of A Buffalo Signaling Glycoprotein (Spb-40) Secreted During Involution Length = 361 | Back alignment and structure |
| >pdb|1E9L|A Chain A, The Crystal Structure Of Novel Mammalian Lectin Ym1 Suggests A Saccharide Binding Site Length = 377 | Back alignment and structure |
| >pdb|4AY1|A Chain A, Human Ykl-39 Is A Pseudo-Chitinase With Retained Chitooligosaccharide Binding Properties Length = 365 | Back alignment and structure |
| >pdb|1ITX|A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12 Length = 419 | Back alignment and structure |
| >pdb|1W9P|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human And Bacterial Chitinasefra Length = 433 | Back alignment and structure |
| >pdb|1WNO|A Chain A, Crystal Structure Of A Native Chitinase From Aspergillus Fumigatus Yj- 407 Length = 395 | Back alignment and structure |
| >pdb|1LL6|A Chain A, Structure Of The D169n Mutant Of C. Immitis Chitinase 1 Length = 392 | Back alignment and structure |
| >pdb|1LL7|A Chain A, Structure Of The E171q Mutant Of C. Immitis Chitinase 1 Length = 392 | Back alignment and structure |
| >pdb|1D2K|A Chain A, C. Immitis Chitinase 1 At 2.2 Angstroms Resolution Length = 392 | Back alignment and structure |
| >pdb|3G6L|A Chain A, The Crystal Structure Of A Chitinase Crchi1 From The Nematophagous Fungus Clonostachys Rosea Length = 406 | Back alignment and structure |
| >pdb|1JND|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2 Length = 420 | Back alignment and structure |
| >pdb|1RD6|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant W167a Length = 563 | Back alignment and structure |
| >pdb|2WLY|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline. Length = 548 | Back alignment and structure |
| >pdb|2WK2|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline Dithioamide Length = 540 | Back alignment and structure |
| >pdb|1CTN|A Chain A, Crystal Structure Of A Bacterial Chitinase At 2.3 Angstroms Resolution Length = 540 | Back alignment and structure |
| >pdb|1K9T|A Chain A, Chitinase A Complexed With Tetra-N-Acetylchitotriose Length = 540 | Back alignment and structure |
| >pdb|1EIB|A Chain A, Crystal Structure Of Chitinase A Mutant D313a Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540 | Back alignment and structure |
| >pdb|1EHN|A Chain A, Crystal Structure Of Chitinase A Mutant E315q Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540 | Back alignment and structure |
| >pdb|1EDQ|A Chain A, Crystal Structure Of Chitinase A From S. Marcescens At 1.55 Angstroms Length = 540 | Back alignment and structure |
| >pdb|1FFR|A Chain A, Crystal Structure Of Chitinase A Mutant Y390f Complexed With Hexa-n- Acetylchitohexaose (nag)6 Length = 540 | Back alignment and structure |
| >pdb|3QOK|A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae Length = 420 | Back alignment and structure |
| >pdb|1NH6|A Chain A, Structure Of S. Marcescens Chitinase A, E315l, Complex With Hexasaccharide Length = 540 | Back alignment and structure |
| >pdb|1UR9|A Chain A, Interactions Of A Family 18 Chitinase With The Designed Inhibitor Hm508, And Its Degradation Product, Chitobiono-Delta-Lactone Length = 499 | Back alignment and structure |
| >pdb|1E6N|B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q In Complex With N-Acetylglucosamine-Pentamer Length = 499 | Back alignment and structure |
| >pdb|3ARS|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio Harveyi With Novel Inhibitors - Apo Structure Of Mutant W275g Length = 584 | Back alignment and structure |
| >pdb|1OGB|A Chain A, Chitinase B From Serratia Marcescens Mutant D142n Length = 499 | Back alignment and structure |
| >pdb|1E15|A Chain A, Chitinase B From Serratia Marcescens Length = 499 | Back alignment and structure |
| >pdb|1E6Z|A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex With Catalytic Intermediate Length = 498 | Back alignment and structure |
| >pdb|1H0G|A Chain A, Complex Of A Chitinase With The Natural Product Cyclopentapeptide Argadin From Clonostachys Length = 499 | Back alignment and structure |
| >pdb|1GOI|A Chain A, Crystal Structure Of The D140n Mutant Of Chitinase B From Serratia Marcescens At 1.45 A Resolution Length = 499 | Back alignment and structure |
| >pdb|3B8S|A Chain A, Crystal Structure Of Wild-Type Chitinase A From Vibrio Harveyi Length = 584 | Back alignment and structure |
| >pdb|3B9A|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed With Hexasaccharide Length = 584 | Back alignment and structure |
| >pdb|1KFW|A Chain A, Structure Of Catalytic Domain Of Psychrophilic Chitinase B From Arthrobacter Tad20 Length = 435 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Length = 353 | Back alignment and structure |
|---|
Score = 336 bits (863), Expect = e-113
Identities = 146/354 (41%), Positives = 212/354 (59%), Gaps = 8/354 (2%)
Query: 27 IKVGYWDSGDGFPISDVNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKN 86
+K GYW G +++++ LFTHL C FAD+N +L +SP +++ F FT TV+ KN
Sbjct: 4 VKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSFRQFTSTVQRKN 63
Query: 87 PSITTLLSIGGGNNPNYSTYSSMSASSSSRKSFIDSSIKIARLYGFQGLDLSWNSANTSR 146
PS+ T LSI GG N + Y M+ +SRKSFIDSSI++AR GF GLDL W ++
Sbjct: 64 PSVKTFLSIAGGRA-NSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSAA 122
Query: 147 DKYNIGILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHV 206
D N+G L EWR A++ EAR NS ++ L+LTA V++SP YPV+S+ + L+W+++
Sbjct: 123 DMTNLGTLLNEWRTAINTEAR-NSGRAALLLTAAVSNSPRVNGLNYPVESLARNLDWINL 181
Query: 207 MTTGYSKPTW-TNFTGAHAALYDPNSVSNTEYGITEWIEEGLSADKLVLCLPFYGFAWTL 265
M + P W + T +HA L+DP + + GI WI+ G+ KLVL +PFYG+AW L
Sbjct: 182 MAYDFYGPNWSPSQTNSHAQLFDPVNHVSGSDGINAWIQAGVPTKKLVLGIPFYGYAWRL 241
Query: 266 VKPEDNGIGAAATGPAL---YDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGKI 322
V +G+ A A G + DDG +TY I+++I +YN+T V +YC G
Sbjct: 242 VNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVESRAT--TVYNATIVGDYCYSGSN 299
Query: 323 WFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHYWMLSRAAAEEDNKNRQNKR 376
W +DD + VR KV+Y K + L GY+ W V+ D W LSR A++ + Q +
Sbjct: 300 WISYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQNWGLSRTASQTWGVSFQEMK 353
|
| >3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Length = 356 | Back alignment and structure |
|---|
| >4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
| >3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Length = 395 | Back alignment and structure |
|---|
| >1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Length = 377 | Back alignment and structure |
|---|
| >1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Length = 445 | Back alignment and structure |
|---|
| >2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Length = 361 | Back alignment and structure |
|---|
| >1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Length = 433 | Back alignment and structure |
|---|
| >3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Length = 406 | Back alignment and structure |
|---|
| >1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Length = 392 | Back alignment and structure |
|---|
| >3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Length = 420 | Back alignment and structure |
|---|
| >1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Length = 420 | Back alignment and structure |
|---|
| >1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Length = 419 | Back alignment and structure |
|---|
| >1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Length = 540 | Back alignment and structure |
|---|
| >1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Length = 499 | Back alignment and structure |
|---|
| >1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Length = 435 | Back alignment and structure |
|---|
| >3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Length = 574 | Back alignment and structure |
|---|
| >3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Length = 312 | Back alignment and structure |
|---|
| >3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Length = 584 | Back alignment and structure |
|---|
| >3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Length = 319 | Back alignment and structure |
|---|
| >3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Length = 275 | Back alignment and structure |
|---|
| >3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Length = 393 | Back alignment and structure |
|---|
| >3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Length = 333 | Back alignment and structure |
|---|
| >1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Length = 271 | Back alignment and structure |
|---|
| >2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Length = 290 | Back alignment and structure |
|---|
| >3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Length = 302 | Back alignment and structure |
|---|
| >3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} Length = 321 | Back alignment and structure |
|---|
| >1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Length = 290 | Back alignment and structure |
|---|
| >2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Length = 289 | Back alignment and structure |
|---|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
| >3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} Length = 451 | Back alignment and structure |
|---|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
| >2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A Length = 311 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 468 | |||
| 3alf_A | 353 | Chitinase, class V; hydrolase; 1.20A {Nicotiana ta | 100.0 | |
| 3aqu_A | 356 | AT4G19810; stress response, TIM barrel, hydrolase, | 100.0 | |
| 3fy1_A | 395 | Amcase, TSA1902, acidic mammalian chitinase; struc | 100.0 | |
| 4ay1_A | 365 | Chitinase-3-like protein 2; chilectin, lectin, chi | 100.0 | |
| 1vf8_A | 377 | YM1, secretory protein; chitinase, CHI-lectin, str | 100.0 | |
| 2pi6_A | 361 | Chitinase-3-like protein 1; complex, signaling pro | 100.0 | |
| 1wb0_A | 445 | Chitinase 1, chitotriosidase 1; cyclopentapeptide | 100.0 | |
| 1itx_A | 419 | Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) | 100.0 | |
| 3qok_A | 420 | Putative chitinase II; structural genomics, PSI-bi | 100.0 | |
| 3g6m_A | 406 | Chitinase, crchi1; inhibitor, caffeine, glycosidas | 100.0 | |
| 1kfw_A | 435 | Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob | 100.0 | |
| 1goi_A | 499 | Chitinase B; chitin degradation, hydrolase, glycos | 100.0 | |
| 1edq_A | 540 | Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1 | 100.0 | |
| 1ll7_A | 392 | Chitinase 1; beta-alpha barrel, hydrolase; 2.00A { | 100.0 | |
| 1jnd_A | 420 | Imaginal DISC growth factor-2; IDGF, chitinase, in | 100.0 | |
| 1w9p_A | 433 | Chitinase; peptide inhibitors, argifin, argadin, g | 100.0 | |
| 3arx_A | 584 | Chitinase A; TIM barrel, inhibitor complex, glycos | 100.0 | |
| 3oa5_A | 574 | CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers | 100.0 | |
| 3cz8_A | 319 | Putative sporulation-specific glycosylase YDHD; st | 100.0 | |
| 3bxw_B | 393 | Chitinase domain-containing protein 1; TIM barrel, | 100.0 | |
| 3fnd_A | 312 | Chitinase; TIM-barrel, structural genomics, PSI-2, | 100.0 | |
| 1nar_A | 290 | Narbonin; plant SEED protein; 1.80A {Vicia narbone | 100.0 | |
| 3n12_A | 333 | Chitinase A, chinctu2; zinc atoms, complex, hydrol | 100.0 | |
| 2y8v_A | 290 | CHIC, class III chitinase, putative; afchic, hydro | 100.0 | |
| 3sim_A | 275 | Protein, family 18 chitinase; family 18 plant chit | 100.0 | |
| 4axn_A | 328 | Chitinase C1; hydrolase; 1.68A {Serratia marcescen | 100.0 | |
| 3ebv_A | 302 | Chinitase A; chitinase A, CHIA, glycosidase, struc | 100.0 | |
| 3ian_A | 321 | Chitinase; structural genomics, hydrolase, glycosi | 100.0 | |
| 4ac1_X | 283 | Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, g | 99.97 | |
| 2hvm_A | 273 | Hevamine; hydrolase, chitinase/lysozyme; 1.80A {He | 99.96 | |
| 2gsj_A | 271 | Protein PPL-2; mimosoideae, chimerolectin, endochi | 99.96 | |
| 1edt_A | 271 | Endo-beta-N-acetylglucosaminidase H, endo H; hydro | 99.95 | |
| 2uy2_A | 294 | Endochitinase; carbohydrate metabolism, polysaccha | 99.95 | |
| 1eok_A | 290 | Endo-beta-N-acetylglucosaminidase F3; alpha/beta-b | 99.94 | |
| 1cnv_A | 299 | Concanavalin B; plant chitinase, chitin binding pr | 99.94 | |
| 2ebn_A | 289 | Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl | 99.92 | |
| 2xtk_A | 310 | CHIA1, class III chitinase CHIA1; hydrolase, GH18; | 99.92 | |
| 1ta3_A | 274 | XIP-1, xylanase inhibitor protein I; beta alpha ba | 99.89 | |
| 3poh_A | 451 | Endo-beta-N-acetylglucosaminidase F1; TIM barrel, | 99.86 | |
| 3mu7_A | 273 | XAIP-II, xylanase and alpha-amylase inhibitor prot | 99.84 | |
| 2dsk_A | 311 | Chitinase; catalytic domain, active domain, crysta | 99.7 | |
| 2w91_A | 653 | Endo-beta-N-acetylglucosaminidase D; hydrolase, N- | 97.77 | |
| 2vtf_A | 626 | Endo-beta-N-acetylglucosaminidase; hydrolase, fami | 97.7 | |
| 3gdb_A | 937 | Endo-D, putative uncharacterized protein SPR0440; | 93.37 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 89.65 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 87.13 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 85.21 | |
| 2jwa_A | 44 | Receptor tyrosine-protein kinase ERBB-2; transmemb | 84.68 | |
| 2l2t_A | 44 | Receptor tyrosine-protein kinase ERBB-4; transmemb | 84.6 | |
| 2aam_A | 309 | Hypothetical protein TM1410; structural genomics, | 83.58 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 83.43 | |
| 4f9d_A | 618 | Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; | 83.39 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 82.65 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 81.73 | |
| 2wnw_A | 447 | Activated by transcription factor SSRB; hydrolase, | 81.69 | |
| 1wzl_A | 585 | Alpha-amylase II; pullulan, GH-13, alpha-amylase f | 81.43 | |
| 2dh2_A | 424 | 4F2 cell-surface antigen heavy chain; TIM-barrel, | 80.26 |
| >3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-68 Score=517.16 Aligned_cols=336 Identities=43% Similarity=0.803 Sum_probs=302.5
Q ss_pred CcEEEEEEcCCCCCCCCCCCCCCCcEEEEEeEEeeCCCcEEecCCcchHHHHHHHHHHHhhCCCcEEEEEEeCCCCCCCc
Q 012202 25 TLIKVGYWDSGDGFPISDVNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLLSIGGGNNPNYS 104 (468)
Q Consensus 25 ~~~v~gY~~~~~~~~~~~~~~~~~thi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~kvllsigG~~~~~~~ 104 (468)
+++++|||-....+.+++++.++||||+|+|+.++++++.+...+.+...+..+++.+|+++|++|+++|||||+. ++.
T Consensus 2 ~~~~~gY~~~~~~~~~~~i~~~~~THi~yaF~~i~~~~~~v~~~~~~~~~~~~~~~~lk~~~~~lkvllsiGG~~~-~~~ 80 (353)
T 3alf_A 2 QNVKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSFRQFTSTVQRKNPSVKTFLSIAGGRA-NST 80 (353)
T ss_dssp CCEEEEEEEGGGCCCGGGCCGGGCSEEEEEEEEEETTTTEEECCHHHHHHHHHHHHHHHHHCTTCEEEEEEECTTS-CHH
T ss_pred CceEEEEEecCCCCCHhHCCcccCCEEEEEEEEeeCCCCEEEeCCccHHHHHHHHHHHHhhCCCCeEEEEECCCCC-Cch
Confidence 4789999955567999999999999999999999998778887766567788888889999999999999999985 467
Q ss_pred cchHhhcChhhHHHHHHHHHHHHHHcCCCeeeeeccCCCCCCchhhHHHHHHHHHHHHHHHhhcCCCCceEEEEEEeccC
Q 012202 105 TYSSMSASSSSRKSFIDSSIKIARLYGFQGLDLSWNSANTSRDKYNIGILFKEWRAAVDLEARNNSSQSQLILTAKVAHS 184 (468)
Q Consensus 105 ~~~~~~~~~~~r~~fi~~l~~~l~~~~~DGvdiD~E~~~~~~~~~~~~~ll~~lr~~l~~~~~~~~~~~~~~ls~a~~~~ 184 (468)
.|+.+++++++|++|++++++++++|+|||||||||+|..++|+.+|+.||++||++|++.++. .+++.++||+++|+.
T Consensus 81 ~f~~~~~~~~~r~~fi~siv~~~~~~~fDGiDiDwE~p~~~~d~~n~~~ll~eLr~~l~~~~~~-~~~~~~~Ls~a~~~~ 159 (353)
T 3alf_A 81 AYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSAADMTNLGTLLNEWRTAINTEARN-SGRAALLLTAAVSNS 159 (353)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHTCSEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHHHH-HCSCCCEEEEEEESS
T ss_pred hHHHHhcCHHHHHHHHHHHHHHHHHcCCCeEEEEeeecCChhHHHHHHHHHHHHHHHHHHhhhh-cCCCceEEEEecccC
Confidence 8999999999999999999999999999999999999977789999999999999999987543 344448999999976
Q ss_pred cccccCCCChhHHhccccEEeeecccccCC-CCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCceEEecceeEEee
Q 012202 185 PLSTAAAYPVDSIRQYLNWVHVMTTGYSKP-TWTNFTGAHAALYDPNSVSNTEYGITEWIEEGLSADKLVLCLPFYGFAW 263 (468)
Q Consensus 185 ~~~~~~~~~~~~l~~~~D~v~lm~yd~~~~-~~~~~~~~~apl~~~~~~~~~~~~~~~~~~~g~~~~Ki~lglp~yG~~~ 263 (468)
+......||+++|.+++||||||+||+||+ |....+||+|||+++....+++.+|+.|++.|+|++||+||+|+|||.|
T Consensus 160 ~~~~~~~~d~~~l~~~vD~invMtYD~~g~~w~~~~~g~~a~l~~~~~~~~~~~~v~~~~~~gvp~~KlvlGip~YGr~~ 239 (353)
T 3alf_A 160 PRVNGLNYPVESLARNLDWINLMAYDFYGPNWSPSQTNSHAQLFDPVNHVSGSDGINAWIQAGVPTKKLVLGIPFYGYAW 239 (353)
T ss_dssp SEETTEECCHHHHHHHCSEEEEECCCSSCTTTSTTBCCCSSCSCCTTTCCSHHHHHHHHHHTTCCGGGEEEEEESEEEEE
T ss_pred chhhhcCCCHHHHhhhccEEEEEEeeccCCCCCCCCCCCCCcCcCCCCCccHHHHHHHHHHcCCChHHEEEEeCCceeee
Confidence 655445689999999999999999999999 8657899999999877788999999999999999999999999999999
Q ss_pred eecCCCCCCCCCccCCC---CCCCCccccHHHHHHHhhcCCCCeEEEEecceeeEEEEeCCEEEEEcCHHHHHHHHHHhh
Q 012202 264 TLVKPEDNGIGAAATGP---ALYDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGKIWFGFDDVEAVRVKVSYAK 340 (468)
Q Consensus 264 ~~~~~~~~~~~~~~~~~---~~~~~~~~~y~~i~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~i~~~~~~s~~~k~~~~~ 340 (468)
++.++.++++++|+.|+ ++.++|.++|.|||+++++++ ++..||+.+++||.|.+.+||+|||++|+..|++|++
T Consensus 240 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~y~ei~~~~~~~g--~~~~~D~~~~~~y~y~~~~~v~ydd~~Si~~K~~~~~ 317 (353)
T 3alf_A 240 RLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVESR--ATTVYNATIVGDYCYSGSNWISYDDTQTVRNKVNYVK 317 (353)
T ss_dssp EESCTTCCSTTCBEEEECTTSCTTTCEEEHHHHHHHHHHHT--CEEEEETTTTEEEEEETTEEEEECCHHHHHHHHHHHH
T ss_pred eccCCcCCCCCCCCCCCCCCCCCCCCeEcHHHHHHHHhhCC--CeEEEccccceEEEEeCCEEEEcCCHHHHHHHHHHHH
Confidence 99999999999998776 556779999999999998888 9999999999999999899999999999999999999
Q ss_pred hcCcccEEEEeeccCcchhhhhhh
Q 012202 341 EKKLRGYYVWEVSYDHYWMLSRAA 364 (468)
Q Consensus 341 ~~~L~G~~~~~l~~d~~~~~~~~~ 364 (468)
+.+|+|+++|+++.|+.+.+..+.
T Consensus 318 ~~gLgGv~~W~l~~Dd~~~ll~a~ 341 (353)
T 3alf_A 318 GRGLLGYFAWHVAGDQNWGLSRTA 341 (353)
T ss_dssp HTTCSEEEEECGGGSSTTHHHHHH
T ss_pred hCCCCEEEEEeccCCCCchHHHHH
Confidence 999999999999999877665543
|
| >3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* | Back alignment and structure |
|---|
| >4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
| >1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A | Back alignment and structure |
|---|
| >2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... | Back alignment and structure |
|---|
| >1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* | Back alignment and structure |
|---|
| >1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 | Back alignment and structure |
|---|
| >3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* | Back alignment and structure |
|---|
| >1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 | Back alignment and structure |
|---|
| >1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* | Back alignment and structure |
|---|
| >1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* | Back alignment and structure |
|---|
| >1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A | Back alignment and structure |
|---|
| >1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* | Back alignment and structure |
|---|
| >1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* | Back alignment and structure |
|---|
| >3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* | Back alignment and structure |
|---|
| >3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A | Back alignment and structure |
|---|
| >3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
| >3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
| >3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A | Back alignment and structure |
|---|
| >1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 | Back alignment and structure |
|---|
| >3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* | Back alignment and structure |
|---|
| >2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} | Back alignment and structure |
|---|
| >3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} | Back alignment and structure |
|---|
| >4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} | Back alignment and structure |
|---|
| >3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} | Back alignment and structure |
|---|
| >3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
| >4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina} | Back alignment and structure |
|---|
| >2hvm_A Hevamine; hydrolase, chitinase/lysozyme; 1.80A {Hevea brasiliensis} SCOP: c.1.8.5 PDB: 1hvq_A* 1llo_A 1kr0_A* 1kr1_A* 1kqy_A* 1kqz_A* | Back alignment and structure |
|---|
| >2gsj_A Protein PPL-2; mimosoideae, chimerolectin, endochitinase, glycosyl hydrolase family 18, equilibrium sedimentation, X-RAY; 1.73A {Parkia platycephala} | Back alignment and structure |
|---|
| >1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A | Back alignment and structure |
|---|
| >2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation, glycopr chitin-binding, chitin degradation, CAZY, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A* 2uy4_A* 2uy5_A* | Back alignment and structure |
|---|
| >1eok_A Endo-beta-N-acetylglucosaminidase F3; alpha/beta-barrel, hydrolase; 1.80A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 PDB: 1eom_A* | Back alignment and structure |
|---|
| >1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5 | Back alignment and structure |
|---|
| >2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 | Back alignment and structure |
|---|
| >2xtk_A CHIA1, class III chitinase CHIA1; hydrolase, GH18; HET: AZM; 2.00A {Aspergillus fumigatus} PDB: 2xuc_A 2xvp_A 2xvn_A* | Back alignment and structure |
|---|
| >1ta3_A XIP-1, xylanase inhibitor protein I; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Triticum aestivum} SCOP: c.1.8.5 PDB: 1om0_A* 1te1_A* | Back alignment and structure |
|---|
| >3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >3mu7_A XAIP-II, xylanase and alpha-amylase inhibitor protein; TIM barell, amylase/xylanase inhibitory protein, hydrolase I; 1.29A {Scadoxus multiflorus} SCOP: c.1.8.0 PDB: 3o9n_A 3oih_A* 3hu7_A 3m7s_A* 3d5h_A* | Back alignment and structure |
|---|
| >2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A | Back alignment and structure |
|---|
| >2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A* | Back alignment and structure |
|---|
| >2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A* | Back alignment and structure |
|---|
| >3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A | Back alignment and structure |
|---|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A | Back alignment and structure |
|---|
| >2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15 | Back alignment and structure |
|---|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
| >4f9d_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; family 4 carbohydrate esterase, TIM barrel, hydrolase, deace carbohydrate/sugar binding; HET: MES; 1.90A {Escherichia coli} PDB: 4f9j_A* | Back alignment and structure |
|---|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* | Back alignment and structure |
|---|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
| >2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} | Back alignment and structure |
|---|
| >1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A | Back alignment and structure |
|---|
| >2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 468 | ||||
| d1goia2 | 356 | c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic | 3e-38 | |
| d1w9pa1 | 333 | c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergil | 4e-35 | |
| d1vf8a1 | 302 | c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin | 1e-34 | |
| d1vf8a1 | 302 | c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin | 1e-04 | |
| d1wb0a1 | 297 | c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma | 2e-34 | |
| d1wb0a1 | 297 | c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma | 4e-06 | |
| d1ll7a1 | 330 | c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus ( | 6e-34 | |
| d1edqa2 | 358 | c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalyt | 1e-32 | |
| d2pi6a1 | 292 | c.1.8.5 (A:1-239,A:308-361) Signal processing prot | 5e-31 | |
| d2pi6a1 | 292 | c.1.8.5 (A:1-239,A:308-361) Signal processing prot | 8e-06 | |
| d1jnda1 | 327 | c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth f | 2e-30 | |
| d1kfwa1 | 374 | c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitina | 5e-26 | |
| d1itxa1 | 347 | c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillu | 2e-24 | |
| d1nara_ | 289 | c.1.8.5 (A:) Seed storage protein {Vicia narbonens | 2e-19 | |
| d2ebna_ | 285 | c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl | 5e-17 | |
| d1edta_ | 265 | c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {St | 2e-16 | |
| d2hvma_ | 273 | c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para | 3e-11 | |
| d1vf8a2 | 70 | d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mo | 2e-09 | |
| d1ta3a_ | 274 | c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I { | 5e-09 | |
| d1wb0a2 | 68 | d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo | 1e-06 | |
| d1itxa2 | 72 | d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circul | 3e-06 | |
| d2pi6a2 | 68 | d.26.3.1 (A:240-307) Signal processing protein (SP | 8e-06 | |
| d1edqa3 | 73 | d.26.3.1 (A:444-516) Chitinase A {Serratia marcesc | 3e-05 | |
| d1cnva_ | 283 | c.1.8.5 (A:) Seed storage protein {Jack bean (Cana | 1e-04 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 4e-04 | |
| d1eoka_ | 282 | c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl | 5e-04 | |
| d1kfwa2 | 61 | d.26.3.1 (A:328-388) Psychrophilic chitinase B {Ar | 7e-04 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 8e-04 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 0.001 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 0.003 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 0.003 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 0.004 |
| >d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Chitinase B, catalytic domain species: Serratia marcescens [TaxId: 615]
Score = 140 bits (353), Expect = 3e-38
Identities = 64/340 (18%), Positives = 124/340 (36%), Gaps = 54/340 (15%)
Query: 31 YWDSGDGFPISDVNFAL---FTHLMCGFADVNSTTYELSLSPSDEEQFSNFTD---TVKI 84
S FP+S++ A TH+ F D+NS +++ + + + +K
Sbjct: 22 TDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKA 81
Query: 85 KNPSITTLLSIGGGN-----NPNYSTYSSMSASSSSRKSFIDSSIKIARLYGFQGLDLSW 139
NPS+ + SIGG +++ Y + + +SR F S ++I + YGF G+++ W
Sbjct: 82 HNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDW 141
Query: 140 NSANTSRDKYNIGILFKEWRAAVD-LEARNNSSQSQLILTAKVAHSPLSTAAAY-PVDSI 197
+ + +E R ++ + LT A + Y + I
Sbjct: 142 EY-PQAAEVDGFIAALQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQI 200
Query: 198 RQYLNWVHVMTTGYSKPTWTNFTGAHAALYDPNSVSNTEYGITEWIEEGLSADKLVLCLP 257
L+++++MT + P W T AAL+ + L
Sbjct: 201 VAPLDYINLMTYDLAGP-WEKVTNHQAALFGDAAGP---------------TFYNALREA 244
Query: 258 FYGFAWTLVKPEDNGIGAAATGPALYDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYC 317
G++W + + A ++ H+ G + ++ V+
Sbjct: 245 NLGWSWEELTRAFPSPFSLTVDAA-----------VQQHLMMEG-----VPSAKIVM--- 285
Query: 318 SIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
FDD E+ + K Y K+++L G W + D+
Sbjct: 286 -----GVPFDDAESFKYKAKYIKQQQLGGVMFWHLGQDNR 320
|
| >d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Length = 333 | Back information, alignment and structure |
|---|
| >d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 302 | Back information, alignment and structure |
|---|
| >d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 302 | Back information, alignment and structure |
|---|
| >d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
| >d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
| >d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Length = 330 | Back information, alignment and structure |
|---|
| >d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 358 | Back information, alignment and structure |
|---|
| >d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292 | Back information, alignment and structure |
|---|
| >d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292 | Back information, alignment and structure |
|---|
| >d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 327 | Back information, alignment and structure |
|---|
| >d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 374 | Back information, alignment and structure |
|---|
| >d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 347 | Back information, alignment and structure |
|---|
| >d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Length = 289 | Back information, alignment and structure |
|---|
| >d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Length = 285 | Back information, alignment and structure |
|---|
| >d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Length = 265 | Back information, alignment and structure |
|---|
| >d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 273 | Back information, alignment and structure |
|---|
| >d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 70 | Back information, alignment and structure |
|---|
| >d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 274 | Back information, alignment and structure |
|---|
| >d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 68 | Back information, alignment and structure |
|---|
| >d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 72 | Back information, alignment and structure |
|---|
| >d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 68 | Back information, alignment and structure |
|---|
| >d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} Length = 73 | Back information, alignment and structure |
|---|
| >d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} Length = 283 | Back information, alignment and structure |
|---|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
| >d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Length = 282 | Back information, alignment and structure |
|---|
| >d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 61 | Back information, alignment and structure |
|---|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 468 | |||
| d1w9pa1 | 333 | Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} | 100.0 | |
| d1itxa1 | 347 | Chitinase A1 {Bacillus circulans [TaxId: 1397]} | 100.0 | |
| d1wb0a1 | 297 | Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1kfwa1 | 374 | Psychrophilic chitinase B {Arthrobacter sp., tad20 | 100.0 | |
| d2pi6a1 | 292 | Signal processing protein (SPC-40, MGP-40) {Sheep | 100.0 | |
| d1edqa2 | 358 | Chitinase A, catalytic domain {Serratia marcescens | 100.0 | |
| d1vf8a1 | 302 | Chitinase-like lectin ym1, saccharide binding doma | 100.0 | |
| d1ll7a1 | 330 | Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: | 100.0 | |
| d1jnda1 | 327 | Imaginal disc growth factor-2 {Fruit fly (Drosophi | 100.0 | |
| d1goia2 | 356 | Chitinase B, catalytic domain {Serratia marcescens | 100.0 | |
| d1nara_ | 289 | Seed storage protein {Vicia narbonensis, Narbonin | 99.96 | |
| d1edta_ | 265 | Endo-beta-N-acetylglucosaminidase {Streptomyces pl | 99.94 | |
| d2ebna_ | 285 | Endo-beta-N-acetylglucosaminidase {Flavobacterium | 99.94 | |
| d2hvma_ | 273 | Hevamine A (chitinase/lysozyme) {Para rubber tree | 99.94 | |
| d1ta3a_ | 274 | Xylanase inhibitor protein I, XIP-I {Wheat (Tritic | 99.89 | |
| d1cnva_ | 283 | Seed storage protein {Jack bean (Canavalia ensifor | 99.87 | |
| d1eoka_ | 282 | Endo-beta-N-acetylglucosaminidase {Flavobacterium | 99.72 | |
| d1vf8a2 | 70 | Chitinase-like lectin ym1 {Mouse (Mus musculus) [T | 99.35 | |
| d1wb0a2 | 68 | Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 | 99.21 | |
| d2pi6a2 | 68 | Signal processing protein (SPC-40, MGP-40) {Sheep | 99.16 | |
| d1itxa2 | 72 | Chitinase A1 {Bacillus circulans [TaxId: 1397]} | 99.0 | |
| d1edqa3 | 73 | Chitinase A {Serratia marcescens [TaxId: 615]} | 98.86 | |
| d1kfwa2 | 61 | Psychrophilic chitinase B {Arthrobacter sp., tad20 | 98.7 | |
| d1jnda2 | 92 | Imaginal disc growth factor-2 {Fruit fly (Drosophi | 98.51 | |
| d1w9pa2 | 62 | Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} | 98.18 | |
| d1goia3 | 88 | Chitinase B {Serratia marcescens [TaxId: 615]} | 98.18 | |
| d1ll7a2 | 62 | Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: | 98.17 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 91.65 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 89.77 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 87.77 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 87.09 | |
| d2nt0a2 | 354 | Glucosylceramidase, catalytic domain {Human (Homo | 85.26 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 80.83 | |
| d2aama1 | 285 | Hypothetical protein TM1410 {Thermotoga maritima [ | 80.78 |
| >d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Chitinase 1 species: Aspergillus fumigatus [TaxId: 5085]
Probab=100.00 E-value=1.8e-51 Score=395.91 Aligned_cols=261 Identities=24% Similarity=0.399 Sum_probs=224.9
Q ss_pred cCCcEEEEEEcCC----CCCCCCCCCCCCCcEEEEEeEEeeCCCcEEecCCcc-------------------hHHHHHHH
Q 012202 23 AQTLIKVGYWDSG----DGFPISDVNFALFTHLMCGFADVNSTTYELSLSPSD-------------------EEQFSNFT 79 (468)
Q Consensus 23 ~~~~~v~gY~~~~----~~~~~~~~~~~~~thi~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~ 79 (468)
++..+|||||++| +.+.++++|.++||||+|+|+.++++++.+...++. ...+..+.
T Consensus 2 ~~g~kvv~Yy~~W~~y~~~~~~~~i~~~~~THI~yaFa~i~~~~g~~~~~d~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (333)
T d1w9pa1 2 SSGYRSVVYFVNWAIYGRNHNPQDLPVERLTHVLYAFANVRPETGEVYMTDSWADIEKHYPGDSWSDTGNNVYGCIKQLY 81 (333)
T ss_dssp BCCBEEEEEEEGGGGSTTCCCGGGSCGGGCSEEEEEEEEECTTTCCEEESCHHHHHTCCCTTCCSSCCSSCCCHHHHHHH
T ss_pred CCCCEEEEEECcccccCCCCChhHCCcccCCeEEEeeEEecCCCCeEEecChHHhhccccCCccccccccchhhHHHHHH
Confidence 5678999999996 357899999999999999999999987777665431 23455554
Q ss_pred HHHHhhCCCcEEEEEEeCCCCCCCccchHhhcChhhHHHHHHHHHHHHHHcCCCeeeeeccCCCCCCchhhHHHHHHHHH
Q 012202 80 DTVKIKNPSITTLLSIGGGNNPNYSTYSSMSASSSSRKSFIDSSIKIARLYGFQGLDLSWNSANTSRDKYNIGILFKEWR 159 (468)
Q Consensus 80 ~~~k~~~~~~kvllsigG~~~~~~~~~~~~~~~~~~r~~fi~~l~~~l~~~~~DGvdiD~E~~~~~~~~~~~~~ll~~lr 159 (468)
.+|+++|++||++|||||+. +..|+.++.+++.|++||++++++|++|+|||||||||+|...++..+|+.||++||
T Consensus 82 -~lk~~~p~lKvllSiGGw~~--s~~f~~~~~~~~~R~~Fi~siv~~l~~y~fDGiDiDWE~p~~~~~~~~~~~llkelr 158 (333)
T d1w9pa1 82 -LLKKQNRNLKVLLSIGGWTY--SPNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEYPENDQQANDFVLLLKEVR 158 (333)
T ss_dssp -HHHHHCTTCEEEEEEECTTT--GGGHHHHHTSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCSHHHHHHHHHHHHHHH
T ss_pred -HHHhccCCceEEEEEeCCcC--CCcccccccCHHHHHHHHHHHHHHHHHhcCCceeeeeeecccccccchHHHHHHHHH
Confidence 68999999999999999997 889999999999999999999999999999999999999998778889999999999
Q ss_pred HHHHHHhhcCCCCceEEEEEEeccCcccccCCCChhHHhccccEEeeecccccCCCCCCCCCCCCCCCCCCC-----CCc
Q 012202 160 AAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSKPTWTNFTGAHAALYDPNS-----VSN 234 (468)
Q Consensus 160 ~~l~~~~~~~~~~~~~~ls~a~~~~~~~~~~~~~~~~l~~~~D~v~lm~yd~~~~~~~~~~~~~apl~~~~~-----~~~ 234 (468)
++|+.....+.....+.||+++|+.+.... .|+++++.++|||||||+||++++| +..++++||||.... .++
T Consensus 159 ~~L~~~~~~~~~~~~~~ls~a~~~~~~~~~-~~d~~~i~~~vD~invMtYD~~g~~-~~~tg~~aply~~~~~~~~~~~n 236 (333)
T d1w9pa1 159 TALDSYSAANAGGQHFLLTVASPAGPDKIK-VLHLKDMDQQLDFWNLMAYDYAGSF-SSLSGHQANVYNDTSNPLSTPFN 236 (333)
T ss_dssp HHHHHHHHHHSTTCCCEEEEEECCSHHHHH-HSCHHHHHTTCSEEEECCCCCSSTT-SSSCCCSSCSSCCTTCGGGCSCC
T ss_pred HHHHhhhhhhccCCceEEEEEccCChhhhh-ccchHHHhhcCCeEEEeeeccCCCC-CCCCCCCccccCCCCCCccCCcc
Confidence 999876543333344899999998765543 4899999999999999999999997 567999999986432 568
Q ss_pred HHHHHHHHHHcCCCCCceEEecceeEEeeeecCCCCCCCCCccCCCCCCCCccccHHHHHHHhhcCCCCeEEEEecceee
Q 012202 235 TEYGITEWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGIGAAATGPALYDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVV 314 (468)
Q Consensus 235 ~~~~~~~~~~~g~~~~Ki~lglp~yG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~i~~~~~~~~~~~~~~~d~~~~~ 314 (468)
++.+|++|++.|+|++|||||+||||+.|
T Consensus 237 v~~av~~~~~~Gvp~~KlvlGiPfyg~~~--------------------------------------------------- 265 (333)
T d1w9pa1 237 TQTALDLYRAGGVPANKIVLGMPLDNPQV--------------------------------------------------- 265 (333)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEESCCHHH---------------------------------------------------
T ss_pred HHHHHHHHHHCCCCHHHeEEEeCCCchHH---------------------------------------------------
Confidence 99999999999999999999999998644
Q ss_pred EEEEeCCEEEEEcCHHHHHHHHHHhhhcCcccEEEEeeccCc
Q 012202 315 NYCSIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDH 356 (468)
Q Consensus 315 ~y~~~~~~~i~~~~~~s~~~k~~~~~~~~L~G~~~~~l~~d~ 356 (468)
+..|..|+++++|+|+++|++++|.
T Consensus 266 -----------------~~~k~~y~~~~~lgG~m~We~~~D~ 290 (333)
T d1w9pa1 266 -----------------ANLKSGYIKSLGLGGAMWWDSSSDK 290 (333)
T ss_dssp -----------------HHHHHHHHHHHTCCEEEEECGGGSC
T ss_pred -----------------HHHhHHHHHhCCCceEEEEeccCCC
Confidence 3457889999999999999999885
|
| >d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
| >d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} | Back information, alignment and structure |
|---|
| >d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
| >d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
| >d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} | Back information, alignment and structure |
|---|
| >d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
| >d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} | Back information, alignment and structure |
|---|
| >d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} | Back information, alignment and structure |
|---|
| >d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} | Back information, alignment and structure |
|---|
| >d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
| >d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} | Back information, alignment and structure |
|---|
| >d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} | Back information, alignment and structure |
|---|
| >d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} | Back information, alignment and structure |
|---|
| >d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
| >d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
| >d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
| >d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} | Back information, alignment and structure |
|---|
| >d1jnda2 d.26.3.1 (A:279-370) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1w9pa2 d.26.3.1 (A:299-360) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} | Back information, alignment and structure |
|---|
| >d1goia3 d.26.3.1 (A:292-379) Chitinase B {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
| >d1ll7a2 d.26.3.1 (A:293-354) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} | Back information, alignment and structure |
|---|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
| >d2aama1 c.1.8.15 (A:28-312) Hypothetical protein TM1410 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|