Citrus Sinensis ID: 012209
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 468 | 2.2.26 [Sep-21-2011] | |||||||
| Q0WP36 | 464 | Molybdate transporter 2 O | yes | no | 0.955 | 0.963 | 0.724 | 1e-164 | |
| Q9SL95 | 456 | Molybdate transporter 1 O | no | no | 0.925 | 0.949 | 0.530 | 1e-132 | |
| A6YCJ2 | 519 | Molybdate transporter 1 O | N/A | no | 0.435 | 0.393 | 0.421 | 2e-39 |
| >sp|Q0WP36|MOT2_ARATH Molybdate transporter 2 OS=Arabidopsis thaliana GN=MOT2 PE=1 SV=2 | Back alignment and function desciption |
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Score = 577 bits (1486), Expect = e-164, Method: Compositional matrix adjust.
Identities = 337/465 (72%), Positives = 384/465 (82%), Gaps = 18/465 (3%)
Query: 10 TTTAPLVHHNH-------RPGRRKHSLVSELSGAVGDLGTFIPIVLTLTLVSNLDLSTTL 62
TTT PL+ + R R K+ L SELSGAVGDLGTFIPIVLTLTLVSNLDLSTTL
Sbjct: 3 TTTTPLLPGDRSRCGWLRRRLRLKNPLSSELSGAVGDLGTFIPIVLTLTLVSNLDLSTTL 62
Query: 63 IFTSLYNIATGLLFGLPMPVQPMKSIAAVAVSESPHLTTSQIAAAGLCTAATLFLLGLTG 122
IFT YNIATGLLF +PMPVQPMKSIAAVAVSESPHLT SQIAAAG TAATL LLG TG
Sbjct: 63 IFTGFYNIATGLLFDIPMPVQPMKSIAAVAVSESPHLTPSQIAAAGASTAATLLLLGATG 122
Query: 123 LMSFFYRFIPLPVVRGVQLSQGLSFAFTAIKYVRFNQDFATSKSTSS-RPWLGLDGLLLA 181
MSF Y IPLPVVRGVQLSQGL FAFTAIKYVRFN D AT K +SS R WLGLDGL+LA
Sbjct: 123 AMSFLYNIIPLPVVRGVQLSQGLQFAFTAIKYVRFNYDTATLKPSSSPRIWLGLDGLILA 182
Query: 182 LTAILFLVLTTGSGDYGTHNQEFDIDNTDDVNDSGRRLRLHTRLRILSAIPAALVVFLLG 241
L A+LF++L+TGSG+ ++ D+ T S RLR+LS+IP+AL+VF LG
Sbjct: 183 LAALLFIILSTGSGN-DREAEDGDLAETS----SNESQSRRRRLRLLSSIPSALIVFALG 237
Query: 242 LILCFIRDPTIFNDLRFGPSEISVLKITWDDWKVGFLRAAIPQIPLSVLNSVIAVCKLSG 301
L+LCFIRDP+IF DL+FGPS+ +L+I+WDDWK+GFLRAAIPQIPLSVLNSVIAVCKLS
Sbjct: 238 LVLCFIRDPSIFKDLKFGPSKFHILRISWDDWKIGFLRAAIPQIPLSVLNSVIAVCKLSN 297
Query: 302 DLFPDREELSATKVSISVGVMNFVGCWFGAMPVCHGAGGLAGQYRFGARSGMAVVFLGLG 361
DLF +ELSAT VSISVGVMN +GCWFGAMPVCHGAGGLAGQYRFGARSG++V+FLG+G
Sbjct: 298 DLF--DKELSATTVSISVGVMNLIGCWFGAMPVCHGAGGLAGQYRFGARSGLSVIFLGIG 355
Query: 362 KLAIGLVFGNSFMRILGQFPIGILGVLLLFAGIELAMASRDMNTKEESFVMLVCAAVSLT 421
KL +GLVFGNSF+RIL QFPIGILGVLLLFAGIELAMAS+DMN+KE+SF+MLVCAAVS+T
Sbjct: 356 KLIVGLVFGNSFVRILSQFPIGILGVLLLFAGIELAMASKDMNSKEDSFIMLVCAAVSMT 415
Query: 422 GSSAALGFCCGILLFLLLKLRSMECSRFGVSKFWSKSSAEDMDDS 466
GSSAALGF CG++L+LLLKLR+++CS +S+SS E DS
Sbjct: 416 GSSAALGFGCGVVLYLLLKLRTLDCSSV---TLFSRSSDESQVDS 457
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Molybdate transporter required for vacuolar molybdate export during senescence. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9SL95|MOT1_ARATH Molybdate transporter 1 OS=Arabidopsis thaliana GN=MOT1 PE=1 SV=1 | Back alignment and function description |
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| >sp|A6YCJ2|MOT1_CHLRE Molybdate transporter 1 OS=Chlamydomonas reinhardtii GN=MOT1 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 468 | ||||||
| 255553015 | 464 | sulfate transporter, putative [Ricinus c | 0.980 | 0.989 | 0.770 | 0.0 | |
| 225442781 | 469 | PREDICTED: uncharacterized protein LOC10 | 0.948 | 0.946 | 0.717 | 1e-169 | |
| 449436100 | 470 | PREDICTED: molybdate transporter 2-like | 0.985 | 0.980 | 0.658 | 1e-169 | |
| 356526171 | 469 | PREDICTED: uncharacterized protein LOC10 | 0.976 | 0.974 | 0.695 | 1e-164 | |
| 15220100 | 464 | sulfate transmembrane transporter [Arabi | 0.955 | 0.963 | 0.724 | 1e-162 | |
| 110738373 | 464 | sulfate transporter like protein [Arabid | 0.955 | 0.963 | 0.722 | 1e-161 | |
| 297842833 | 459 | sulfate transporter [Arabidopsis lyrata | 0.918 | 0.936 | 0.729 | 1e-160 | |
| 14270245 | 447 | putative sulfate transporter [Brassica n | 0.897 | 0.939 | 0.732 | 1e-157 | |
| 414877453 | 459 | TPA: sulfate transporter [Zea mays] gi|4 | 0.910 | 0.928 | 0.664 | 1e-155 | |
| 226499738 | 459 | sulfate transporter [Zea mays] gi|195642 | 0.910 | 0.928 | 0.662 | 1e-154 |
| >gi|255553015|ref|XP_002517550.1| sulfate transporter, putative [Ricinus communis] gi|223543182|gb|EEF44714.1| sulfate transporter, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/470 (77%), Positives = 405/470 (86%), Gaps = 11/470 (2%)
Query: 3 EQRQQTPTTTAPLVHHN---HRPGRRKHSLVSELSGAVGDLGTFIPIVLTLTLVSNLDLS 59
E +T TTT PL+H N HR K ++ SELSGAVGDLGTFIPIVLTLTLVS+LDLS
Sbjct: 2 ESPSRTTTTTTPLLHQNRWWHRHLHLKTTISSELSGAVGDLGTFIPIVLTLTLVSHLDLS 61
Query: 60 TTLIFTSLYNIATGLLFGLPMPVQPMKSIAAVAVSESPHLTTSQIAAAGLCTAATLFLLG 119
TTLIFTSLYNI+TGLLFG+PMPVQPMKSIAAVAVSE PHLTT+QIA AG TAATL +LG
Sbjct: 62 TTLIFTSLYNISTGLLFGIPMPVQPMKSIAAVAVSELPHLTTAQIATAGATTAATLLILG 121
Query: 120 LTGLMSFFYRFIPLPVVRGVQLSQGLSFAFTAIKYVRFNQDFATSKSTSSRPWLGLDGLL 179
TGLMSFFY+FIPLPVVRGVQLSQGLSFAF+AIKY+R+NQDF TSKSTS R WLGLDGL+
Sbjct: 122 ATGLMSFFYKFIPLPVVRGVQLSQGLSFAFSAIKYIRYNQDFITSKSTSPRSWLGLDGLV 181
Query: 180 LALTAILFLVLTTGSG-DYGTHNQEFDIDNTDDVNDSGRRLRLHTRLRILSAIPAALVVF 238
LA++A+LFL+ TTGSG D+ + + D+ + S +R R++ RLRILSAIPAAL+VF
Sbjct: 182 LAISALLFLIFTTGSGADHPSMS-----DDDQSLTRSSQR-RVNRRLRILSAIPAALIVF 235
Query: 239 LLGLILCFIRDPTIFNDLRFGPSEISVLKITWDDWKVGFLRAAIPQIPLSVLNSVIAVCK 298
L GL+LCFIRDP+I DL+FGPS I VLKI W+DWK+GFLR AIPQIPLSVLNSVIAVCK
Sbjct: 236 LFGLVLCFIRDPSIIKDLKFGPSRIQVLKIAWEDWKIGFLRGAIPQIPLSVLNSVIAVCK 295
Query: 299 LSGDLFPDREELSATKVSISVGVMNFVGCWFGAMPVCHGAGGLAGQYRFGARSGMAVVFL 358
LS DLFPDR ELSATKVSISVG+MN VGCWFGAMPVCHGAGGLAGQYRFGARSG +VVFL
Sbjct: 296 LSTDLFPDR-ELSATKVSISVGLMNLVGCWFGAMPVCHGAGGLAGQYRFGARSGASVVFL 354
Query: 359 GLGKLAIGLVFGNSFMRILGQFPIGILGVLLLFAGIELAMASRDMNTKEESFVMLVCAAV 418
G+GKL IGLVFGNSF+RIL QFPIGILGVLLLFAGIELAMAS+DMNTKEESFVMLVCAAV
Sbjct: 355 GIGKLVIGLVFGNSFIRILNQFPIGILGVLLLFAGIELAMASKDMNTKEESFVMLVCAAV 414
Query: 419 SLTGSSAALGFCCGILLFLLLKLRSMECSRFGVSKFWSKSSAEDMDDSVP 468
S+TGSSAALGF CGILL+LLLKLRSM+CS F + F SKSS +D +P
Sbjct: 415 SMTGSSAALGFGCGILLYLLLKLRSMDCSYFRFTNFCSKSSDDDQSILIP 464
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225442781|ref|XP_002285217.1| PREDICTED: uncharacterized protein LOC100241221 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449436100|ref|XP_004135832.1| PREDICTED: molybdate transporter 2-like [Cucumis sativus] gi|449490985|ref|XP_004158766.1| PREDICTED: molybdate transporter 2-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356526171|ref|XP_003531693.1| PREDICTED: uncharacterized protein LOC100776620 [Glycine max] | Back alignment and taxonomy information |
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| >gi|15220100|ref|NP_178147.1| sulfate transmembrane transporter [Arabidopsis thaliana] gi|387942523|sp|Q0WP36.2|MOT2_ARATH RecName: Full=Molybdate transporter 2; AltName: Full=Sulfate transporter like protein 5.1 gi|12324980|gb|AAG52436.1|AC018848_7 putative sulfate transporter; 22471-23865 [Arabidopsis thaliana] gi|17381200|gb|AAL36412.1| putative sulfate transporter protein [Arabidopsis thaliana] gi|21537100|gb|AAM61441.1| putative sulfate transporter [Arabidopsis thaliana] gi|30793913|gb|AAP40409.1| putative sulfate transporter protein [Arabidopsis thaliana] gi|332198265|gb|AEE36386.1| sulfate transmembrane transporter [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|110738373|dbj|BAF01113.1| sulfate transporter like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297842833|ref|XP_002889298.1| sulfate transporter [Arabidopsis lyrata subsp. lyrata] gi|297335139|gb|EFH65557.1| sulfate transporter [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|14270245|emb|CAC39421.1| putative sulfate transporter [Brassica napus] | Back alignment and taxonomy information |
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| >gi|414877453|tpg|DAA54584.1| TPA: sulfate transporter [Zea mays] gi|414881218|tpg|DAA58349.1| TPA: sulfate transporter [Zea mays] | Back alignment and taxonomy information |
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| >gi|226499738|ref|NP_001150854.1| sulfate transporter [Zea mays] gi|195642388|gb|ACG40662.1| sulfate transporter [Zea mays] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 468 | ||||||
| TAIR|locus:2034245 | 464 | MOT2 "molybdate transporter 2" | 0.955 | 0.963 | 0.645 | 2.3e-142 | |
| TAIR|locus:2050261 | 456 | MOT1 "molybdate transporter 1" | 0.831 | 0.853 | 0.507 | 6.9e-102 | |
| ASPGD|ASPL0000072673 | 349 | AN4645 [Emericella nidulans (t | 0.329 | 0.441 | 0.474 | 2e-61 | |
| UNIPROTKB|A6YCJ2 | 519 | MOT1 "Molybdate transporter 1" | 0.401 | 0.362 | 0.438 | 1.4e-60 | |
| UNIPROTKB|Q8E9W2 | 390 | SO_4150 "Sulphate transporter" | 0.356 | 0.428 | 0.339 | 8.6e-31 | |
| TIGR_CMR|SO_4150 | 390 | SO_4150 "transporter, putative | 0.356 | 0.428 | 0.339 | 8.6e-31 |
| TAIR|locus:2034245 MOT2 "molybdate transporter 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1392 (495.1 bits), Expect = 2.3e-142, P = 2.3e-142
Identities = 300/465 (64%), Positives = 339/465 (72%)
Query: 10 TTTAPLVHHNH-RPG---RR---KHSLVSELSGAVGDLGTFIPIVLTLTLVSNLDLSTTL 62
TTT PL+ + R G RR K+ L SELSGAVGDLGTFIPIVLTLTLVSNLDLSTTL
Sbjct: 3 TTTTPLLPGDRSRCGWLRRRLRLKNPLSSELSGAVGDLGTFIPIVLTLTLVSNLDLSTTL 62
Query: 63 IFTSLYNIATGLLFGLPMPVQPMKSIAAVAVSESPHLTTSQIXXXXXXXXXXXXXXXXXX 122
IFT YNIATGLLF +PMPVQPMKSIAAVAVSESPHLT SQI
Sbjct: 63 IFTGFYNIATGLLFDIPMPVQPMKSIAAVAVSESPHLTPSQIAAAGASTAATLLLLGATG 122
Query: 123 XMSFFYRFIPLPVVRGVQLSQGLSFAFTAIKYVRFNQDFATSKSTSS-RPWXXXXXXXXX 181
MSF Y IPLPVVRGVQLSQGL FAFTAIKYVRFN D AT K +SS R W
Sbjct: 123 AMSFLYNIIPLPVVRGVQLSQGLQFAFTAIKYVRFNYDTATLKPSSSPRIWLGLDGLILA 182
Query: 182 XXXXXXXXXXXGSGDYGTHNQEFDIDNTDDVNDSGXXXXXXXXXXXXSAIPAALVVFLLG 241
GSG+ ++ D+ T N+S S+IP+AL+VF LG
Sbjct: 183 LAALLFIILSTGSGN-DREAEDGDLAETSS-NES---QSRRRRLRLLSSIPSALIVFALG 237
Query: 242 LILCFIRDPTIFNDLRFGPSEISVLKITWDDWKVGFLRAAIPQIPLSVLNSVIAVCKLSG 301
L+LCFIRDP+IF DL+FGPS+ +L+I+WDDWK+GFLRAAIPQIPLSVLNSVIAVCKLS
Sbjct: 238 LVLCFIRDPSIFKDLKFGPSKFHILRISWDDWKIGFLRAAIPQIPLSVLNSVIAVCKLSN 297
Query: 302 DLFPDREELSATKVSISVGVMNFVGCWFGAMPVCHGAGGLAGQYRFGARSGMAVVFLGLG 361
DLF D+E LSAT VSISVGVMN +GCWFGAMPVCHGAGGLAGQYRFGARSG++V+FLG+G
Sbjct: 298 DLF-DKE-LSATTVSISVGVMNLIGCWFGAMPVCHGAGGLAGQYRFGARSGLSVIFLGIG 355
Query: 362 KLAIGLVFGNSFMRILGQFPIGILGVLLLFAGIELAMASRDMNTKEESFVMLVCAAVSLT 421
KL +GLVFGNSF+RIL QFPIGILGVLLLFAGIELAMAS+DMN+KE+SF+MLVCAAVS+T
Sbjct: 356 KLIVGLVFGNSFVRILSQFPIGILGVLLLFAGIELAMASKDMNSKEDSFIMLVCAAVSMT 415
Query: 422 GSSAAXXXXXXXXXXXXXXXRSMECSRFGVSKFWSKSSAEDMDDS 466
GSSAA R+++CS V+ F S+SS E DS
Sbjct: 416 GSSAALGFGCGVVLYLLLKLRTLDCS--SVTLF-SRSSDESQVDS 457
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| TAIR|locus:2050261 MOT1 "molybdate transporter 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000072673 AN4645 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A6YCJ2 MOT1 "Molybdate transporter 1" [Chlamydomonas reinhardtii (taxid:3055)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8E9W2 SO_4150 "Sulphate transporter" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
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| TIGR_CMR|SO_4150 SO_4150 "transporter, putative" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q0WP36 | MOT2_ARATH | No assigned EC number | 0.7247 | 0.9551 | 0.9633 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 468 | |||
| COG0659 | 554 | COG0659, SUL1, Sulfate permease and related transp | 7e-10 | |
| pfam00916 | 279 | pfam00916, Sulfate_transp, Sulfate transporter fam | 7e-04 |
| >gnl|CDD|223732 COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 7e-10
Identities = 79/422 (18%), Positives = 136/422 (32%), Gaps = 64/422 (15%)
Query: 44 IPIVLTLTLVSNLDLSTTLIFTSLYNIATGLLFGLPM----PVQPMKSIAAVAVSESPHL 99
+P+ + + + + L + + I L G P + A ++
Sbjct: 36 LPLAMAFAIAAGVPPEAGLYASIVAGIIYALFGGSRGLISGPTGAFAVVLAAVIASLVET 95
Query: 100 TTSQIAAAGLCTAATLFLLGLTGLMSFFYRFIPLPVVRGVQLSQGLSFAFTAIKYVRFNQ 159
+ A L LLGL L RFIP PV+ G + T + +
Sbjct: 96 GLALAFLATLLAGVFQILLGLLRL-GRLIRFIPRPVLIGFTAGIAILIILTQLPVL-LGL 153
Query: 160 DFATSKSTSSRPWLGLDGLLLALTAILFLVLTTGSGDYGTHNQEFDIDNTDDVNDSGRRL 219
S + L L + L +L +LT
Sbjct: 154 ASKVSGFWAKVSALFTVLLTINLATLLLGLLTLAI------------------------- 188
Query: 220 RLHTRLRILSAIPAALVVFLLGLILCFIRDPTIFNDLRFG--PSEISVLKITWDDWKVGF 277
L R+ IP+ L+ +LG ++ +I + LR+G P + + V
Sbjct: 189 -LLFLPRLTPRIPSPLIALVLGTLIVWIFP---LDSLRYGEIPGSLPSGLPHFRLPNVSL 244
Query: 278 --LRAAIPQIPL--------SVLNSVIAVCKLSGDLFPDREELSATKVSISVGVMNFVGC 327
L A +P S+L +V +RE I+ G+ N
Sbjct: 245 SLLLALLPYALALALLGLLESLLTAVSFDGMTGTKHDSNRE-------LIAQGIANIASG 297
Query: 328 WFGAMPVCHGAGGLAGQYRFGARSGMAVVFLGLGKLAIGLVFGNSFMRILGQFPIGILGV 387
FG +P A + GAR+ ++ + L + L ++ P+ L
Sbjct: 298 LFGGIPATGSISRSAINIKSGARTRLSGIIHAALLLLLLLFLAP----LVSYIPLAALAA 353
Query: 388 LLLFAGIELA-----MASRDMNTKEESFVMLVCAAVSLTGSSAALGFCCGILLFLLLKLR 442
+L+ G L + E V+L A +++ +G GILL LL +R
Sbjct: 354 VLILVGWGLLDWSLLKPLLRKLPRGELLVLLTTALLTVF-FDLVIGVVVGILLACLLFIR 412
Query: 443 SM 444
+
Sbjct: 413 RI 414
|
Length = 554 |
| >gnl|CDD|216188 pfam00916, Sulfate_transp, Sulfate transporter family | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 468 | |||
| COG0659 | 554 | SUL1 Sulfate permease and related transporters (MF | 100.0 | |
| PRK11660 | 568 | putative transporter; Provisional | 100.0 | |
| TIGR00815 | 563 | sulP high affinity sulphate transporter 1. (2) SO4 | 100.0 | |
| KOG0236 | 665 | consensus Sulfate/bicarbonate/oxalate exchanger SA | 100.0 | |
| PF00916 | 280 | Sulfate_transp: Sulfate transporter family; InterP | 100.0 | |
| COG2252 | 436 | Xanthine/uracil/vitamin C permease [Nucleotide tra | 99.97 | |
| TIGR00843 | 395 | benE benzoate transporter. The benzoate transporte | 99.95 | |
| TIGR03173 | 406 | pbuX xanthine permease. All the seed members of th | 99.94 | |
| PF03594 | 378 | BenE: Benzoate membrane transport protein; InterPr | 99.93 | |
| TIGR00801 | 415 | ncs2 uracil-xanthine permease. NCS2 family appears | 99.9 | |
| PRK10720 | 428 | uracil transporter; Provisional | 99.87 | |
| COG3135 | 402 | BenE Uncharacterized protein involved in benzoate | 99.87 | |
| PF00860 | 389 | Xan_ur_permease: Permease family; InterPro: IPR006 | 99.77 | |
| TIGR03616 | 429 | RutG pyrimidine utilization transport protein G. T | 99.76 | |
| COG2233 | 451 | UraA Xanthine/uracil permeases [Nucleotide transpo | 99.48 | |
| PRK11412 | 433 | putative uracil/xanthine transporter; Provisional | 99.37 | |
| PF13792 | 84 | Sulfate_tra_GLY: Sulfate transporter N-terminal do | 98.8 | |
| TIGR00834 | 900 | ae anion exchange protein. They preferentially cat | 98.61 | |
| KOG1172 | 876 | consensus Na+-independent Cl/HCO3 exchanger AE1 an | 98.04 | |
| KOG1292 | 510 | consensus Xanthine/uracil transporters [Nucleotide | 97.9 | |
| PF11840 | 492 | DUF3360: Protein of unknown function (DUF3360); In | 97.07 | |
| PF00955 | 510 | HCO3_cotransp: HCO3- transporter family Only parti | 96.43 |
| >COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-52 Score=448.96 Aligned_cols=389 Identities=20% Similarity=0.256 Sum_probs=296.0
Q ss_pred CCCchhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHhcCCc-ccchhHHHHHHH---HHh
Q 012209 19 NHRPGRRKHSLVSELSGAVGDLGTFIPIVLTLTLVSNLDLSTTLIFTSLYNIATGLLFGLP-MPVQPMKSIAAV---AVS 94 (468)
Q Consensus 19 ~~~~~~~~~~~~~el~g~l~~~~t~lP~~~a~a~~aGlpp~~~l~~~gl~~ii~g~~~~~p-l~v~P~~aiaa~---~i~ 94 (468)
+..+.++|+|+.++++.++ ..+|++|||+.++|+||++|||++-+..++.+++.++| +..+|+++++.+ .++
T Consensus 15 ~~~~~~l~~Dl~AGltva~----valP~ama~a~~aGv~p~~GLyas~i~~~v~alfGgs~~~i~GPt~a~~~v~a~~i~ 90 (554)
T COG0659 15 YYFRSWLRGDLLAGLTVAA----VALPLAMAFAIAAGVPPEAGLYASIVAGIIYALFGGSRGLISGPTGAFAVVLAAVIA 90 (554)
T ss_pred ccchhhhHHHHHHHHHHHH----HHhHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHcCCccceeccchhhHHHHHHHHH
Confidence 3345558888888888766 88999999999999999999999999999999988887 455676555544 333
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccChhHHHHHHHHHHHHHHHhhhhhhhcCCcccc-----cc-CCC
Q 012209 95 ESPHLTTSQIAAAGLCTAATLFLLGLTGLMSFFYRFIPLPVVRGVQLSQGLSFAFTAIKYVRFNQDFAT-----SK-STS 168 (468)
Q Consensus 95 ~~~~~~~~~~~~a~ll~Gvi~lllGl~rlg~ll~~~Ip~pVi~Gf~aGigl~I~~~ql~~~lg~~~~~~-----~~-~~~ 168 (468)
.....+++.+..+++++|++|+++|++|+|++ ++|+|+||+.||++|+|+.|+.+|++.++|.+.... .. ...
T Consensus 91 ~~~~~g~~~~~~~tllaGv~~i~~G~lRLG~l-i~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~~~~~~~~~~~~~~l~~ 169 (554)
T COG0659 91 SLVETGLALAFLATLLAGVFQILLGLLRLGRL-IRFIPRPVLIGFTAGIAILIILTQLPVLLGLASKVSGFWAKVSALFT 169 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchHHHHHHHHH
Confidence 11145677788899999999999999999998 999999999999999999999999999999853221 00 011
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHhccCCCCCCCcccccCCCCCCccchhhhhhhhhhhhcccchHHHHHHHHHHHHHHHh
Q 012209 169 SRPWLGLDGLLLALTAILFLVLTTGSGDYGTHNQEFDIDNTDDVNDSGRRLRLHTRLRILSAIPAALVVFLLGLILCFIR 248 (468)
Q Consensus 169 ~~~~~~~~~~~l~~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~iP~~Li~vvvg~~l~~~~ 248 (468)
.....++.++.+++.++++++. . +| +.+++|+.++++++++.+++.+
T Consensus 170 ~~~~~~~~~~~lg~~~l~il~~-~------------------------------~~--~~~~~P~~liaiv~~t~i~~~~ 216 (554)
T COG0659 170 VLLTINLATLLLGLLTLAILLF-L------------------------------PR--LTPRIPSPLIALVLGTLIVWIF 216 (554)
T ss_pred hcccccHHHHHHHHHHHHHHHH-c------------------------------cc--hhhhCCcHHHHHHHHHHHHHHh
Confidence 1111234477788888777652 1 22 2368999999999999999987
Q ss_pred cCCc--cCcc--ccCCCcccccCCChh--hhHHHHHHHhhhhHHHHHHHHHHHHHHHhcccCCCccccccchhHHHHhHH
Q 012209 249 DPTI--FNDL--RFGPSEISVLKITWD--DWKVGFLRAAIPQIPLSVLNSVIAVCKLSGDLFPDREELSATKVSISVGVM 322 (468)
Q Consensus 249 ~~~~--~~~~--~~g~~~p~~~~p~~~--~~~~~~l~~~l~~~~lt~~~svia~~~l~~~l~~~~~~~~~n~el~a~Gla 322 (468)
+.+. .+++ .++...|.+..|+++ ++ ..++..++....+.++++......+.. .. +. +.|.|||+++||++
T Consensus 217 ~~~~~~~G~i~~~lp~~~~~~~~P~~~~~~~-~~l~~~al~la~lg~iesllta~~~~~-~~-~~-~~d~nrELiaqGia 292 (554)
T COG0659 217 PLDSLRYGEIPGSLPSGLPHFRLPNVSLSLL-LALLPYALALALLGLLESLLTAVSFDG-MT-GT-KHDSNRELIAQGIA 292 (554)
T ss_pred cCCchhcccCcccCCcCCCcccCCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-CC-CCCCCHHHHHhhHH
Confidence 6553 2322 122345555556543 33 233333333333334444433333332 22 22 79999999999999
Q ss_pred HHHhhhhCCccccchhhhhhhhhcCCCcchhHHHHHHHHHHHHHHHhccchhhHhhhcChHHHHHHHHHHHHHHHHHh--
Q 012209 323 NFVGCWFGAMPVCHGAGGLAGQYRFGARSGMAVVFLGLGKLAIGLVFGNSFMRILGQFPIGILGVLLLFAGIELAMAS-- 400 (468)
Q Consensus 323 Nl~~~~fGg~p~~~s~srsa~n~~~GarT~la~vv~g~~~ll~~L~~~~~~~~ll~~iP~avLaaili~ag~~L~~~~-- 400 (468)
|+++++|||+|.|++++||++|.++|||||+|++++|+++++++++++ |++++||+++|++++++++++|++..
T Consensus 293 Ni~sglfgg~p~~g~~srS~~nv~sGarT~lsgi~~a~~lll~l~~~~----~~~~~IP~a~Laavli~v~~~l~~~~~~ 368 (554)
T COG0659 293 NIASGLFGGIPATGSISRSAINIKSGARTRLSGIIHAALLLLLLLFLA----PLVSYIPLAALAAVLILVGWGLLDWSLL 368 (554)
T ss_pred HHHHHHhCCccccchhHHHHHHHHhCCcChHHHHHHHHHHHHHHHHHH----HHHHhCcHHHHHHHHHHHHHHhccHHHH
Confidence 999999999999999999999999999999999999999988888887 89999999999999999999998531
Q ss_pred ---hhcCCcchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhhhcccccccc
Q 012209 401 ---RDMNTKEESFVMLVCAAVSLTGSSAALGFCCGILLFLLLKLRSMECSRFGVSKF 454 (468)
Q Consensus 401 ---~~~~~~~~~~v~~~t~~~tl~~~~i~~Gi~vGi~~~~~l~~~~~~~~~~~~~~~ 454 (468)
+++..|.|+.++++|++.+++ .|+..|+.+|++++.++..++..+.+....+.
T Consensus 369 ~~~~~~~~~~e~~v~~~t~~~tv~-~~l~~GV~vGi~ls~~~~i~r~s~~~~~~~~~ 424 (554)
T COG0659 369 KPLLRKLPRGELLVLLTTALLTVF-FDLVIGVVVGILLACLLFIRRISRPSIVVLGR 424 (554)
T ss_pred HHHHhcCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhchHHHhhcc
Confidence 233578899998888888885 89999999999999999888776655533444
|
|
| >PRK11660 putative transporter; Provisional | Back alignment and domain information |
|---|
| >TIGR00815 sulP high affinity sulphate transporter 1 | Back alignment and domain information |
|---|
| >KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related | Back alignment and domain information |
|---|
| >COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00843 benE benzoate transporter | Back alignment and domain information |
|---|
| >TIGR03173 pbuX xanthine permease | Back alignment and domain information |
|---|
| >PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ] | Back alignment and domain information |
|---|
| >TIGR00801 ncs2 uracil-xanthine permease | Back alignment and domain information |
|---|
| >PRK10720 uracil transporter; Provisional | Back alignment and domain information |
|---|
| >COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters [] | Back alignment and domain information |
|---|
| >TIGR03616 RutG pyrimidine utilization transport protein G | Back alignment and domain information |
|---|
| >COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK11412 putative uracil/xanthine transporter; Provisional | Back alignment and domain information |
|---|
| >PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif | Back alignment and domain information |
|---|
| >TIGR00834 ae anion exchange protein | Back alignment and domain information |
|---|
| >KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised | Back alignment and domain information |
|---|
| >PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 468 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 1e-05
Identities = 63/433 (14%), Positives = 106/433 (24%), Gaps = 156/433 (36%)
Query: 17 HHNHRPGRRKHSL---VSELSGAVGDLGTFIPIVLTLTLVSNLDLSTTL-----IFTS-- 66
HH+H H + E D+ + + V N D I +
Sbjct: 1 HHHH------HHMDFETGEHQYQYKDI---LSVFED-AFVDNFDCKDVQDMPKSILSKEE 50
Query: 67 ---LYNI-----ATGLLFGLPMPVQPMKSIAAVAVSES-----PHLTTSQIAAAGLCTAA 113
+ T LF + Q + + V E L S I +
Sbjct: 51 IDHIIMSKDAVSGTLRLFWTLLSKQ--EEMVQKFVEEVLRINYKFLM-SPIKTEQRQPSM 107
Query: 114 --TLFLLGLTGLMSFFYRFIPLPVVRG---VQLSQGLSFAFTAIKYVRFNQDFATSKST- 167
+++ L + F V R ++L Q L K V + + K+
Sbjct: 108 MTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQAL-LELRPAKNVLIDGVLGSGKTWV 166
Query: 168 -----------SSRP----WLGL-----DGLLLALTAILFLVLTTGSGDYGTHNQEFDID 207
WL L +L + L + H+
Sbjct: 167 ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN-IKL 225
Query: 208 NTDDVNDSGRRL---RLHTR-LRILSAI--PAALVVFLLGLILCFI----RDPTIFNDLR 257
+ RRL + + L +L + A F L C I R + + L
Sbjct: 226 RIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS---CKILLTTRFKQVTDFLS 282
Query: 258 ---------------FGPSE---------------------------ISVL-------KI 268
P E +S++
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLA 342
Query: 269 TWDDWKVGFLRAAIPQIPLSVLNSVIAVC--KLSGD----------LFPDREELSATKVS 316
TWD+WK + L ++I L +FP
Sbjct: 343 TWDNWK---------HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP-------SAH 386
Query: 317 ISVGVMNFVGCWF 329
I +++ + WF
Sbjct: 387 IPTILLSLI--WF 397
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 468 | |||
| 3qe7_A | 429 | Uracil permease; uracil transporter, URAA, transpo | 99.94 |
| >3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-24 Score=226.33 Aligned_cols=338 Identities=13% Similarity=0.139 Sum_probs=220.8
Q ss_pred hCCChhhHHHHHHHHHHHHHHhcCCcccc--hhHHHH-HHH-HHhcCCCCCHHHHHHHHHHHHHHHHHHHHh--hhH-HH
Q 012209 54 SNLDLSTTLIFTSLYNIATGLLFGLPMPV--QPMKSI-AAV-AVSESPHLTTSQIAAAGLCTAATLFLLGLT--GLM-SF 126 (468)
Q Consensus 54 aGlpp~~~l~~~gl~~ii~g~~~~~pl~v--~P~~ai-aa~-~i~~~~~~~~~~~~~a~ll~Gvi~lllGl~--rlg-~l 126 (468)
-|+|+.++++.+|+.+++.+++.|.++|. ++.-+. +.. ++.. ++++++.++.+++|++++++|.+ |+| ++
T Consensus 39 lGl~~~~~l~~agi~Tllq~~~~~~~lP~~~G~sfafi~~~~~i~~---~g~~~~~gavi~aGli~ill~~~~~~~g~~~ 115 (429)
T 3qe7_A 39 FHINPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLP---LGYEVALGGFIMCGVLFCLVSFIVKKAGTGW 115 (429)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHTTTCCCCCEEECGGGHHHHHHHGG---GCHHHHHHHHHHHHHHHHHHHHHHHTTCSHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHHcCCCCCeEecChHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 39999999999999999999876665543 453222 111 1222 67999999999999999999999 887 56
Q ss_pred HhhccChhHHHHHHHHHHHHHHHhhhhhhhcCCccccccCCCCCCCchhhHHHHHHHHHHHHHHHhccCCCCCCCccccc
Q 012209 127 FYRFIPLPVVRGVQLSQGLSFAFTAIKYVRFNQDFATSKSTSSRPWLGLDGLLLALTAILFLVLTTGSGDYGTHNQEFDI 206 (468)
Q Consensus 127 l~~~Ip~pVi~Gf~aGigl~I~~~ql~~~lg~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~l~~~~~~~~~~~~~~~~ 206 (468)
+.|++|+.|+..|++.+|+.++-.++++.-+... ..++.++..+.+++.++++++++.
T Consensus 116 l~~~~PpvviG~~i~~IGl~l~~~~~~~~~~~~~--------~~~~~~~~~~~la~~tl~iii~~~-------------- 173 (429)
T 3qe7_A 116 LDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPA--------EGQTPDSKTIIISITTLAVTVLGS-------------- 173 (429)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHHHHHTSSCB--------TTBCCCHHHHHHHHHHHHHHHHHH--------------
T ss_pred HHHHCCCeeeHHHHHHHHHHHHHHHHHhccccCC--------CCccccHHHHHHHHHHHHHHHHHH--------------
Confidence 6999998888889999999999888886532210 011222345667777777766433
Q ss_pred CCCCCCccchhhhhhhhhhhhcccchHHHHHHHHHHHHHHHhcCCccCccc-cC-CCcccccCCChhhhHHHHHHHhhhh
Q 012209 207 DNTDDVNDSGRRLRLHTRLRILSAIPAALVVFLLGLILCFIRDPTIFNDLR-FG-PSEISVLKITWDDWKVGFLRAAIPQ 284 (468)
Q Consensus 207 ~~~~~~~~~~~~~~~~~r~~~~~~iP~~Li~vvvg~~l~~~~~~~~~~~~~-~g-~~~p~~~~p~~~~~~~~~l~~~l~~ 284 (468)
|+.|...+.++.|+++++++++++.++..+...+. .+ ...|.+..|+|+ |. .+...++.
T Consensus 174 ----------------~~~kg~~~~~aiLigivvg~~~a~~~G~~d~~~v~~a~~~~lP~~~~P~f~-~~--~i~~i~~i 234 (429)
T 3qe7_A 174 ----------------VLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTPRFE-WF--AILTILPA 234 (429)
T ss_dssp ----------------HSSSTTTTTHHHHHHHHHHHHHHHHHHHTTSSHHHHSCSSCCCCCCCCCCC-HH--HHHHHTHH
T ss_pred ----------------HHhcccchhhHHHHHHHHHHHHHHHhcCCCcccccccccccccCCCCCccc-HH--HHHHHHHH
Confidence 11122334578999999999999877543222211 00 134555556553 43 33334444
Q ss_pred HHHHHHHHHH---HHHHHhcccCCCccccccchhHHHHhHHHHHhhhhCCccccchhhhhhhhhcCCCcchhHHHHHHHH
Q 012209 285 IPLSVLNSVI---AVCKLSGDLFPDREELSATKVSISVGVMNFVGCWFGAMPVCHGAGGLAGQYRFGARSGMAVVFLGLG 361 (468)
Q Consensus 285 ~~lt~~~svi---a~~~l~~~l~~~~~~~~~n~el~a~GlaNl~~~~fGg~p~~~s~srsa~n~~~GarT~la~vv~g~~ 361 (468)
...++.+++- ++....++ +.++ +.+.|||+.++|++|+++++||++|.|.+.....++...|++||.+.+++|++
T Consensus 235 ~lV~~~Eslg~~~av~~~~g~-~~~~-~~~~~r~l~adGla~i~~glfGg~p~Tt~~en~g~i~~tg~~sr~~~~~ag~~ 312 (429)
T 3qe7_A 235 ALVVIAEHVGHLVVTANIVKK-DLLR-DPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIF 312 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHTS-CTCC-CCCHHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHHHHTBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CCCC-CCCcchHHHHHHHHHHHHHhcCCCCcchHHHhHHHHHhcCCcchHHHHHHHHH
Confidence 4444444432 23323222 2122 56789999999999999999999999975444456677899999999999998
Q ss_pred HHHHHHHhccchhhHhhhcChHHHHHHHHHHHHHHHH-----Hh--hhcC--CcchHHHHHHHHHHHHH----------H
Q 012209 362 KLAIGLVFGNSFMRILGQFPIGILGVLLLFAGIELAM-----AS--RDMN--TKEESFVMLVCAAVSLT----------G 422 (468)
Q Consensus 362 ~ll~~L~~~~~~~~ll~~iP~avLaaili~ag~~L~~-----~~--~~~~--~~~~~~v~~~t~~~tl~----------~ 422 (468)
++++.++ |.+.++++.+|.+++|++.++ .+.++. .. ++.+ ++++.++.-+.....+- .
T Consensus 313 lillgl~--pk~~al~~~IP~~vlgg~~l~-lfg~i~~~Gi~~l~~~~v~~~~~rn~~i~~~~l~~G~g~~~~~~~~~~~ 389 (429)
T 3qe7_A 313 AILLSCV--GKLAAAIQMIPLPVMGGVSLL-LYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAEL 389 (429)
T ss_dssp HHHHTCC--HHHHHHHTTSCHHHHHHHHHH-HHHHHHHHHHHHHHHTTSCTTSHHHHHHHHHHHHHHHHCCCCCSSSCCC
T ss_pred HHHHHHH--HHHHHHHHHccHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHhhhhhcc
Confidence 8655432 344589999999999997543 455532 22 2222 23444444443333331 1
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 012209 423 SSAALGFCCGILLFLLLK 440 (468)
Q Consensus 423 ~~i~~Gi~vGi~~~~~l~ 440 (468)
.++..|-.+++++..++.
T Consensus 390 ~gi~~~~~~ai~ln~~l~ 407 (429)
T 3qe7_A 390 KGMALATIVGIGLSLIFK 407 (429)
T ss_dssp CHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHhc
Confidence 146777777777777764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00