Citrus Sinensis ID: 012288

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460------
MGSCFSKEKGSSDATDDAAAAVGSSGRWRKSRDAIFLKKKSSIDDDADQLLHHISGRMVNNAASKTACVYTQQGKKGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHSSAVNGSVEEDSTTEPPHEAAERVAVTDGKNTALDVPGDSHALAVDNLRNLQGSSEIVPVPEVNRKVFCEEPGPIKEEPSRVYFYC
ccccccccccccccccHHHHccccccccccccHHHHHHcccccccccccccccccccEEEcccccEEEEEccccccccccccEEEcccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccEEEEEEcccccEEEEEccccccEEEEEcccccccccHHHHHHHHHcccEEEEccccccccEEccccccccccEEEccccccccccccEEEccEEEEEEccccccEEEEEcccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccccccccccccccHHHHHHHHcccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccc
ccccEccccccccccccccccccccccccccccccccccHHHHHHccccccccccccEEcccccEEEEEEEccccccccccHEEEEccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEccccEEEEEcccccEEEEEcccccEEEEEEEccccccccHHHHHHHHHcccEEEEccccccccEEEEcccccccHHHHHHHccHHHHHccEEEcccEEEEEEccccEEEEEEccccHEEccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEccccccccHHHHcHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHcccccccccccHEEcc
mgscfskekgssdatddAAAAVgssgrwrksrDAIFLkkkssidddaDQLLHHISGRMVNNAASKTACVYtqqgkkginqdAMIVWenfsssdtvfcgifdghgpyghmvakkvrdslpvilcsqwkasndqtsfenangsthseetaslsmdeegfetldtegdklpeiyLPLKKSMLKSFKLMDKElklhpaidcfcsgttavtlvkqgpdivignvgdsrAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRvfalqdepevarvwlpnndspgLAMARAFGDfclkdfglisvpdiyyrrltekdeFIILATDGVWDVISNKEAVEIVASAPSQATAARALVDWAVRSWklkyptsknddcAVVCLFLEHssavngsveedstteppheaaervavtdgkntaldvpgdshALAVDNlrnlqgsseivpvpevnrkvfceepgpikeepsrvyfyc
mgscfskekgssdatddaaaavgssgrwrksrdAIFLKkkssidddaDQLLHHISGRMVNNAASKTACVYTQQGKKGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLAtrekdnslvAVQLTvdlkpdlpREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIvasapsqatAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHSSAVNGSVEEDSTTEPPHEAAERVAVTDGKNTALDVPGDSHALAVDNLRnlqgsseivpvpevnrkvfceepgpikeepsrvyfyc
MGSCFSKEKgssdatddaaaavgssgRWRKSRDAIFLKKKSSIDDDADQLLHHISGRMVNNAASKTACVYTQQGKKGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSEETASLSMDEEGFETLDTEGDKLPEIYlplkksmlksfklmDKELKLHPAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVasapsqataaraLVDWAVRSWKLKYPTSKNDDCAVVCLFLEHSSAVNGSVEEDSTTEPPHEAAERVAVTDGKNTALDVPGDSHALAVDNLRNLQGSSEIVPVPEVNRKVFCEEPGPIKEEPSRVYFYC
***********************************F************QLLHHISGRMVNNAASKTACVYTQQGKKGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWK****************************************PEIYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEH********************************************************IVPV*EVNRKVFC*****************
*************************************************************AASKTAC**T*QGKKGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKAS*********NGSTHSEETASLSMDE*******T*GDKLPEIYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLF**************************************************************************************FYC
*****************************KSRDAIFLKKKSSIDDDADQLLHHISGRMVNNAASKTACVYTQQGKKGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQ********************DEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHSSAV*********************VTDGKNTALDVPGDSHALAVDNLRNLQGSSEIVPVPEVNRKVFCEEPGPIKEEPSRVYFYC
*************************************************LLHHISGRMVNNAASKTACVYTQQGKKGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASN************************************LPEIYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHSSAV********TTEPPHEAAERVAVTDGKNTALDVPGDSHALAVDNLRNLQGSSEIVPVPEVNRKVFCEEPGPIKEEPSRVYFYC
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SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGSCFSKEKGSSDATDDAAAAVGSSGRWRKSRDAIFLKKKSSIDDDADQLLHHISGRMVNNAASKTACVYTQQGKKGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHSSAVNGSVEEDSTTEPPHEAAERVAVTDGKNTALDVPGDSHALAVDNLRNLQGSSEIVPVPEVNRKVFCEEPGPIKEEPSRVYFYC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query466 2.2.26 [Sep-21-2011]
Q8RXZ4504 Probable protein phosphat yes no 0.871 0.805 0.612 1e-147
Q9SA22491 Probable protein phosphat no no 0.804 0.763 0.641 1e-142
Q6ZKL8531 Probable protein phosphat yes no 0.862 0.757 0.640 1e-138
Q9M8R7492 Probable protein phosphat no no 0.800 0.758 0.571 1e-124
Q9FG61448 Probable protein phosphat no no 0.725 0.754 0.6 1e-118
Q2R637432 Probable protein phosphat no no 0.708 0.763 0.596 1e-114
Q9LR65462 Probable protein phosphat no no 0.684 0.690 0.610 1e-112
Q8GY60468 Probable protein phosphat no no 0.695 0.692 0.598 1e-110
Q6K6N7518 Probable protein phosphat no no 0.693 0.623 0.598 1e-109
Q7XW27460 Probable protein phosphat no no 0.690 0.7 0.579 1e-107
>sp|Q8RXZ4|P2C18_ARATH Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=1 Back     alignment and function desciption
 Score =  523 bits (1346), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 275/449 (61%), Positives = 337/449 (75%), Gaps = 43/449 (9%)

Query: 1   MGSCFS------KEKGSSDATDDAAAAV---GSSGRWRKSRDAIFLKKKSSIDDDADQLL 51
           MG C+S      KE G + +T   A  V     SGRWR+ RD   LK    I+      +
Sbjct: 1   MGLCYSVDRTTGKEPGEASSTATTAETVEERSGSGRWRRPRD---LKGGGDIEG-----I 52

Query: 52  HHISGRMVNNAASKTACVYTQQGKKGINQDAMIVWENF-SSSDTVFCGIFDGHGPYGHMV 110
             + GR+V+N +SK AC+YTQQGKKG NQDAM+V+ENF S  DTVFCG+FDGHGP+GHMV
Sbjct: 53  PQVLGRLVSNGSSKIACLYTQQGKKGTNQDAMLVFENFCSRDDTVFCGVFDGHGPFGHMV 112

Query: 111 AKKVRDSLPVILCSQWKASN--DQTSFENANG---------------STHSEETASLS-M 152
           AKKVRD+LP  L +Q K ++  DQ+S   ANG               S   ++T S++ M
Sbjct: 113 AKKVRDTLPFTLLTQLKMTSESDQSSLVGANGFQIKCTEEEEVQTTESEQVQKTESVTTM 172

Query: 153 DEEGFE-TLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQG 211
           DE+  E   +   D+LPE+YLPLK +MLKS + +DKELK+HP IDCFCSGTT+VTL+KQG
Sbjct: 173 DEQWCELNPNVNNDELPEMYLPLKHAMLKSCQQIDKELKMHPTIDCFCSGTTSVTLIKQG 232

Query: 212 PDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEV 271
            D+V+GN+GDSRAVLATR++DN+L+AVQLT+DLKPDLP E+ARIQ+CKGRVFALQDEPEV
Sbjct: 233 EDLVVGNIGDSRAVLATRDEDNALLAVQLTIDLKPDLPGESARIQKCKGRVFALQDEPEV 292

Query: 272 ARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISN 331
           ARVWLPN+DSPGLAMARAFGDFCLKD+GLISVPDI YRRLTE+D+FIILA+DGVWDV+SN
Sbjct: 293 ARVWLPNSDSPGLAMARAFGDFCLKDYGLISVPDINYRRLTERDQFIILASDGVWDVLSN 352

Query: 332 KEAVEIVASAPSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHSSA---VNGSV 388
           KEAV+IVASAPS++TAARALVD AVRSW++KYPTSKNDDC VVCLFL+ SS    V+ +V
Sbjct: 353 KEAVDIVASAPSRSTAARALVDTAVRSWRIKYPTSKNDDCTVVCLFLQDSSVAMEVSTNV 412

Query: 389 EEDSTTEPPHEAAERVAVTDGKNTALDVP 417
           ++DS   P  E+ E V  +  K     VP
Sbjct: 413 KKDS---PKEESIESVTNSTSKEEDEIVP 438

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9SA22|P2C06_ARATH Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1 Back     alignment and function description
>sp|Q6ZKL8|P2C66_ORYSJ Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1 Back     alignment and function description
>sp|Q9M8R7|P2C33_ARATH Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FG61|P2C74_ARATH Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=2 SV=1 Back     alignment and function description
>sp|Q2R637|P2C75_ORYSJ Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1 Back     alignment and function description
>sp|Q9LR65|P2C01_ARATH Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana GN=PPC6-6 PE=1 SV=1 Back     alignment and function description
>sp|Q8GY60|P2C52_ARATH Probable protein phosphatase 2C 52 OS=Arabidopsis thaliana GN=At4g03415 PE=2 SV=1 Back     alignment and function description
>sp|Q6K6N7|P2C14_ORYSJ Probable protein phosphatase 2C 14 OS=Oryza sativa subsp. japonica GN=Os02g0471500 PE=2 SV=1 Back     alignment and function description
>sp|Q7XW27|P2C38_ORYSJ Probable protein phosphatase 2C 38 OS=Oryza sativa subsp. japonica GN=Os04g0321800 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query466
255576651504 protein phosphatase-2c, putative [Ricinu 0.927 0.857 0.649 1e-165
359494374489 PREDICTED: probable protein phosphatase 0.841 0.801 0.707 1e-161
224061679446 predicted protein [Populus trichocarpa] 0.841 0.878 0.687 1e-155
296090050433 unnamed protein product [Vitis vinifera] 0.740 0.796 0.752 1e-153
224078966436 predicted protein [Populus trichocarpa] 0.804 0.860 0.664 1e-151
242080073517 hypothetical protein SORBIDRAFT_07g02830 0.854 0.769 0.64 1e-150
449494235523 PREDICTED: probable protein phosphatase 0.824 0.734 0.662 1e-149
414869285515 TPA: putative protein phosphatase 2C fam 0.746 0.675 0.725 1e-148
449460481523 PREDICTED: probable protein phosphatase 0.824 0.734 0.659 1e-148
226505454515 LOC100285668 [Zea mays] gi|195651983|gb| 0.746 0.675 0.723 1e-147
>gi|255576651|ref|XP_002529215.1| protein phosphatase-2c, putative [Ricinus communis] gi|223531333|gb|EEF33171.1| protein phosphatase-2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 295/454 (64%), Positives = 354/454 (77%), Gaps = 22/454 (4%)

Query: 1   MGSCFSK---EKGSSDATDDAAAAVGSSGRWRKSRDAIFLKKKSSIDDDADQ-LLHHISG 56
           MGSC+S+   E G  + T   +AA     +W         KKK++     D+ LL+HI G
Sbjct: 1   MGSCYSRRIDESGEGEQTTATSAASPKRHKW---------KKKTAGGGRGDESLLNHIPG 51

Query: 57  RMVNNAASKTACVYTQQGKKGINQDAMIVWENFSS-SDTVFCGIFDGHGPYGHMVAKKVR 115
           RM  N +SK AC+YTQQGKKG NQDAM+VWE+FSS SDTVFCG+FDGHGPYGHMVAKKVR
Sbjct: 52  RMSMNGSSKIACLYTQQGKKGTNQDAMLVWESFSSRSDTVFCGVFDGHGPYGHMVAKKVR 111

Query: 116 DSLPVILCSQWK-ASNDQTS----FENANGSTHSEETASLSMDEEGFETLDTE-GDKLPE 169
           DSLP++LC+QWK  SND+ S     EN   ST+SEETAS S+D+E  + L+ E  +K PE
Sbjct: 112 DSLPLVLCTQWKDGSNDENSSLPKTENTPESTNSEETASASVDDESHDFLEVEQNEKFPE 171

Query: 170 IYLPLKKSMLKSFKLMDKELKLHPAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATR 229
           +Y PLKKS++K+FK+MDKELKLHP IDCFCSG+TAVTL+KQ  D++IGN+GDSRAVLATR
Sbjct: 172 MYQPLKKSIMKAFKMMDKELKLHPTIDCFCSGSTAVTLIKQ--DLIIGNLGDSRAVLATR 229

Query: 230 EKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARA 289
            +DNSL AVQLT+DLKPDLPRE+ARI QCKGRVFAL+DEPEVARVWLPNNDSPGLAMARA
Sbjct: 230 NEDNSLHAVQLTIDLKPDLPRESARIHQCKGRVFALKDEPEVARVWLPNNDSPGLAMARA 289

Query: 290 FGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVASAPSQATAAR 349
           FGDFCLKDFGLISVPD+YY  L + DEFIILATDGVWDV+SNKEAV+IVASAP +ATAAR
Sbjct: 290 FGDFCLKDFGLISVPDVYYHHLIKGDEFIILATDGVWDVLSNKEAVDIVASAPGRATAAR 349

Query: 350 ALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHSSAVNGSVEEDSTTEPPHEAAERVAVTDG 409
           ALVD AVR+W+LKYPTSKNDDCAVVCLFL+H+   NG VE+      P E+ E   + +G
Sbjct: 350 ALVDCAVRAWRLKYPTSKNDDCAVVCLFLDHACEANGEVEDSEVKMIPEESVESAVIRNG 409

Query: 410 KNTALDVPGDSHALAVDNLRNLQGSSEIVPVPEV 443
            +  L    +SH L + +   ++GS EIVP+ E+
Sbjct: 410 NSEELKNHDNSHPLVLSHSDTVRGSDEIVPISEL 443

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359494374|ref|XP_002265613.2| PREDICTED: probable protein phosphatase 2C 6-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224061679|ref|XP_002300600.1| predicted protein [Populus trichocarpa] gi|222847858|gb|EEE85405.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296090050|emb|CBI39869.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224078966|ref|XP_002305698.1| predicted protein [Populus trichocarpa] gi|222848662|gb|EEE86209.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|242080073|ref|XP_002444805.1| hypothetical protein SORBIDRAFT_07g028300 [Sorghum bicolor] gi|241941155|gb|EES14300.1| hypothetical protein SORBIDRAFT_07g028300 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|449494235|ref|XP_004159488.1| PREDICTED: probable protein phosphatase 2C 6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|414869285|tpg|DAA47842.1| TPA: putative protein phosphatase 2C family protein [Zea mays] Back     alignment and taxonomy information
>gi|449460481|ref|XP_004147974.1| PREDICTED: probable protein phosphatase 2C 6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|226505454|ref|NP_001152031.1| LOC100285668 [Zea mays] gi|195651983|gb|ACG45459.1| catalytic/ protein phosphatase type 2C [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query466
TAIR|locus:2019868504 AT1G79630 [Arabidopsis thalian 0.587 0.543 0.631 2.8e-122
TAIR|locus:2032880491 AT1G16220 [Arabidopsis thalian 0.862 0.818 0.566 1.3e-118
TAIR|locus:2020863462 AT1G03590 [Arabidopsis thalian 0.791 0.798 0.523 8.8e-102
TAIR|locus:2183612448 PP2C74 "AT5G36250" [Arabidopsi 0.828 0.861 0.519 1.8e-101
TAIR|locus:504955459468 PP2C52 "AT4G03415" [Arabidopsi 0.695 0.692 0.555 1.7e-98
TAIR|locus:2078117358 AT3G05640 [Arabidopsis thalian 0.493 0.642 0.528 1.4e-78
TAIR|locus:2143325373 AT5G27930 [Arabidopsis thalian 0.448 0.560 0.550 2.5e-77
TAIR|locus:2086755351 AT3G16800 [Arabidopsis thalian 0.420 0.558 0.548 1.4e-72
TAIR|locus:2180612331 AT5G26010 [Arabidopsis thalian 0.416 0.586 0.515 2.3e-64
TAIR|locus:2149775382 AT5G01700 [Arabidopsis thalian 0.519 0.633 0.502 6.2e-62
TAIR|locus:2019868 AT1G79630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 895 (320.1 bits), Expect = 2.8e-122, Sum P(2) = 2.8e-122
 Identities = 178/282 (63%), Positives = 215/282 (76%)

Query:   141 STHSEETASLS-MDEEGFE-TLDTEGDKLPEIYXXXXXXXXXXXXXXDKELKLHPAIDCF 198
             S   ++T S++ MDE+  E   +   D+LPE+Y              DKELK+HP IDCF
Sbjct:   160 SEQVQKTESVTTMDEQWCELNPNVNNDELPEMYLPLKHAMLKSCQQIDKELKMHPTIDCF 219

Query:   199 CSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQC 258
             CSGTT+VTL+KQG D+V+GN+GDSRAVLATR++DN+L+AVQLT+DLKPDLP E+ARIQ+C
Sbjct:   220 CSGTTSVTLIKQGEDLVVGNIGDSRAVLATRDEDNALLAVQLTIDLKPDLPGESARIQKC 279

Query:   259 KGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFI 318
             KGRVFALQDEPEVARVWLPN+DSPGLAMARAFGDFCLKD+GLISVPDI YRRLTE+D+FI
Sbjct:   280 KGRVFALQDEPEVARVWLPNSDSPGLAMARAFGDFCLKDYGLISVPDINYRRLTERDQFI 339

Query:   319 ILATDGVWDVISNKEAVEIVXXXXXXXXXXXXLVDWAVRSWKLKYPTSKNDDCAVVCLFL 378
             ILA+DGVWDV+SNKEAV+IV            LVD AVRSW++KYPTSKNDDC VVCLFL
Sbjct:   340 ILASDGVWDVLSNKEAVDIVASAPSRSTAARALVDTAVRSWRIKYPTSKNDDCTVVCLFL 399

Query:   379 EHSSA---VNGSVEEDSTTEPPHEAAERVAVTDGKNTALDVP 417
             + SS    V+ +V++DS   P  E+ E V  +  K     VP
Sbjct:   400 QDSSVAMEVSTNVKKDS---PKEESIESVTNSTSKEEDEIVP 438
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0005737 "cytoplasm" evidence=ISM
TAIR|locus:2032880 AT1G16220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020863 AT1G03590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183612 PP2C74 "AT5G36250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955459 PP2C52 "AT4G03415" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078117 AT3G05640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143325 AT5G27930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086755 AT3G16800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180612 AT5G26010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149775 AT5G01700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8RXZ4P2C18_ARATH3, ., 1, ., 3, ., 1, 60.61240.87120.8055yesno
Q6ZKL8P2C66_ORYSJ3, ., 1, ., 3, ., 1, 60.64020.86260.7570yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query466
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 4e-68
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 1e-53
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 1e-39
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 2e-24
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 2e-17
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 4e-13
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  217 bits (556), Expect = 4e-68
 Identities = 97/317 (30%), Positives = 147/317 (46%), Gaps = 70/317 (22%)

Query: 67  ACVYTQQGKKGINQDAMIVWENFSSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQW 126
           A V  + G +  N+DA+++  N ++ D    G+FDGHG  GH   +     L   L  + 
Sbjct: 3   AGVSDKGGDRKTNEDAVVIKPNLNNEDGGLFGVFDGHG--GHAAGEFASKLLVEELLEEL 60

Query: 127 KASNDQTSFENANGSTHSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMD 186
           + +   +  +                                     +++++ K+F   D
Sbjct: 61  EETLTLSEED-------------------------------------IEEALRKAFLRAD 83

Query: 187 KEL--KLHPAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDL 244
           +E+  +     D   SGTTAV  + +G  + + NVGDSRAVL    +     AVQLT D 
Sbjct: 84  EEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGE-----AVQLTKDH 138

Query: 245 KPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVP 304
           KP    E  RI++  GRV                     LA+ RA GDF LK  G+ + P
Sbjct: 139 KPVNEEERERIEKAGGRVS-------------NGRVPGVLAVTRALGDFDLK-PGVSAEP 184

Query: 305 DIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVASAPSQAT---AARALVDWAVRSWKL 361
           D+   +LTE D+F+ILA+DG+WDV+SN+EAV+IV S  ++     AA+ LVD A+R    
Sbjct: 185 DVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRRG-- 242

Query: 362 KYPTSKNDDCAVVCLFL 378
                 +D+  VV + L
Sbjct: 243 -----SHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 466
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.97
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.89
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.87
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.84
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.75
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.55
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.39
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.32
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.3e-49  Score=400.56  Aligned_cols=250  Identities=30%  Similarity=0.510  Sum_probs=211.2

Q ss_pred             eeEEecccCCCCCCCccEEeeccCCC---------CCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHhhhcCCccccc
Q 012288           66 TACVYTQQGKKGINQDAMIVWENFSS---------SDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFE  136 (466)
Q Consensus        66 ~~~~~S~~G~R~~NED~~~v~~~~~~---------~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~~~~~~~~~~~  136 (466)
                      .++.+|++|.|..|||++++..++..         .+..|||||||||  |+.+|++|+++++..|.+....        
T Consensus        66 ~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhG--G~~age~as~~l~~~i~~~~~~--------  135 (365)
T PLN03145         66 RSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHG--GKHAADFACYHLPRFIVEDEDF--------  135 (365)
T ss_pred             EEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhcc--------
Confidence            35788999999999999988665421         2468999999999  9999999999999988753110        


Q ss_pred             ccCCCCcccccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCCCC-CccCCCceEEEEEEeCCeeE
Q 012288          137 NANGSTHSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHPAI-DCFCSGTTAVTLVKQGPDIV  215 (466)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~~~-~~~~sGTTav~~li~~~~l~  215 (466)
                                                        ...++++|.++|..+|+.+...... ....+|||++++++.++.+|
T Consensus       136 ----------------------------------~~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~  181 (365)
T PLN03145        136 ----------------------------------PREIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLV  181 (365)
T ss_pred             ----------------------------------chhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEE
Confidence                                              1245677888888888888654322 23459999999999999999


Q ss_pred             EEEeccccEEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCcccccccccccc
Q 012288          216 IGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCL  295 (466)
Q Consensus       216 vanVGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~  295 (466)
                      ||||||||||++++++     +++||.||++..+.|+.||.+.||.|..       .|+      .|.+++||||||..+
T Consensus       182 vaNvGDSRayl~r~g~-----~~~LT~DH~~~~~~E~~RI~~~Gg~v~~-------g~v------~g~l~vTRalGD~~~  243 (365)
T PLN03145        182 VANAGDCRAVLCRRGK-----AIEMSRDHKPMCSKERKRIEASGGYVYD-------GYL------NGQLNVARALGDWHM  243 (365)
T ss_pred             EEecCCceEEEEcCCe-----EEEecCCCCCCCHHHHHHHHHcCCceec-------ceE------CCccccccccccccc
Confidence            9999999999999875     9999999999999999999999998853       233      678899999999988


Q ss_pred             ccC------CcccccEEEEEEeCCCCeEEEEEcCCCCCCCCHHHHHHHHH----cCCCHHHHHHHHHHHHHHhccccCCC
Q 012288          296 KDF------GLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVA----SAPSQATAARALVDWAVRSWKLKYPT  365 (466)
Q Consensus       296 K~~------gv~~~Pdv~~~~L~~~D~flILaSDGlwD~ls~~ei~~iv~----~~~~~~~aA~~Lv~~A~~~w~~~~~~  365 (466)
                      |.+      +++++||+..++|+++|.|||||||||||+|+++++++++.    ...+++++|+.|++.|+.+       
T Consensus       244 k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~r-------  316 (365)
T PLN03145        244 EGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKR-------  316 (365)
T ss_pred             cccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-------
Confidence            754      37899999999999999999999999999999999877664    3468999999999999999       


Q ss_pred             CCCCcEEEEEEEeCCCCCC
Q 012288          366 SKNDDCAVVCLFLEHSSAV  384 (466)
Q Consensus       366 g~~DNiTvIvv~l~~~~~~  384 (466)
                      ++.||||||||+|+..+..
T Consensus       317 gs~DNITvIVV~l~~~~~~  335 (365)
T PLN03145        317 KSGDNLAVVVVCFQSQPPP  335 (365)
T ss_pred             CCCCCEEEEEEEeecCCCc
Confidence            9999999999999875433

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query466
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 4e-19
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 1e-18
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 1e-18
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 1e-18
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 1e-18
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 2e-18
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 1e-14
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 1e-14
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-13
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 2e-13
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 2e-13
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 8e-13
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 1e-12
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-12
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 4e-12
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 6e-11
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 6e-11
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 1e-10
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 2e-10
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 3e-04
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure 
Iteration: 1

 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 116/242 (47%), Gaps = 33/242 (13%)
Query: 96  FCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSEETASLSMDEE 155
           F G++DGHG  GH VA   RD L   L  + +   D+ S  N       +     +    
Sbjct: 67  FFGVYDGHG--GHKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFT---S 121
Query: 156 GFETLDTEGDKLPEIYXXXXXXXXXXXXXXDKELKLHPAIDCFCSGTTAVTLVKQGPDIV 215
            F T+D E                      DK L+   A+     G+TAV  +     IV
Sbjct: 122 CFLTVDGE---------IEGKIGRAVVGSSDKVLE---AVASETVGSTAVVALVCSSHIV 169
Query: 216 IGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVW 275
           + N GDSRAVL  R K+    A+ L+VD KPD   E ARI+   G+V   Q     ARV+
Sbjct: 170 VSNCGDSRAVL-FRGKE----AMPLSVDHKPDREDEYARIENAGGKVIQWQG----ARVF 220
Query: 276 LPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAV 335
                   LAM+R+ GD  LK + +I  P++ +   + +DE +ILA+DG+WDV++N+E  
Sbjct: 221 ------GVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVC 273
Query: 336 EI 337
           EI
Sbjct: 274 EI 275
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query466
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 1e-103
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 5e-65
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 2e-56
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 7e-56
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 9e-56
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 5e-54
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 8e-53
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 7e-51
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 5e-50
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 8e-50
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 1e-48
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 8e-42
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 5e-39
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 2e-09
1txo_A237 Putative bacterial enzyme; serine/threonine protei 2e-08
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 5e-07
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 6e-07
3rnr_A211 Stage II sporulation E family protein; structural 3e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
 Score =  310 bits (797), Expect = e-103
 Identities = 82/327 (25%), Positives = 140/327 (42%), Gaps = 39/327 (11%)

Query: 67  ACVYTQQGKKGINQDAMIVWENF--SSSDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCS 124
           A ++T  G +   +D   +         D  F G+FDG    G   ++ V+D +   L S
Sbjct: 24  AAIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTV--GDFASENVKDLVVPQLIS 81

Query: 125 QWKASNDQTSFENANGSTHSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKL 184
                       +   +T  +E                      ++   L +++   +K 
Sbjct: 82  SPAWQEVTEMLRSDVPATEVDE----------------------KLPQLLDQAVDDMYKN 119

Query: 185 MDKE-LKLHPAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVD 243
            D E +K+   ++   + +T+VT V     + +G++GDSR  +   E  N L    LTVD
Sbjct: 120 ADNELVKMCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSRIAMG-VETPNGLNCEFLTVD 178

Query: 244 LKPDLPREAARIQQCKGRVFALQDEPEVARVWL--------PNNDSPGLAMARAFGDFCL 295
            KPD+P E  RI +  G V  L +      +                 L  +RAFG   L
Sbjct: 179 HKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDL 238

Query: 296 KDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVASAPSQA-TAARALVDW 354
           K +GL + PD+   R+T +   +ILATDG+WDV+S  +AVEI   A  +    A+ALV+ 
Sbjct: 239 KMYGLSNQPDVRVVRVTPQHRVMILATDGLWDVMSAAQAVEIAMQARQEGRNPAQALVEM 298

Query: 355 AVRSWKLKYPTSKNDDCAVVCLFLEHS 381
            +   + +  ++  D+   + +F + +
Sbjct: 299 TLAEQQSRNQSA--DNITAMTVFFKKT 323
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query466
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.84
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.82
3f79_A255 Probable two-component response regulator; adaptor 99.68
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.66
3ke6_A399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.13
3eq2_A394 Probable two-component response regulator; adaptor 98.13
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
Probab=100.00  E-value=3.2e-49  Score=399.11  Aligned_cols=271  Identities=32%  Similarity=0.451  Sum_probs=224.8

Q ss_pred             eecCCceeeEEecccCCCCCCCccEEeeccCCC-------------------CCceEEEEeeCCCCChhhHHHHHHHHHH
Q 012288           59 VNNAASKTACVYTQQGKKGINQDAMIVWENFSS-------------------SDTVFCGIFDGHGPYGHMVAKKVRDSLP  119 (466)
Q Consensus        59 ~~~~~~~~~~~~S~~G~R~~NED~~~v~~~~~~-------------------~~~~l~gV~DGhG~~G~~~a~~as~~l~  119 (466)
                      +.......+++.|++|+|..|||++++..++..                   .+..|||||||||  |+.+|++|++.++
T Consensus         8 ~~~~~~~~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhG--G~~~~~~as~~~~   85 (337)
T 3qn1_B            8 YELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHG--GHKVADYCRDRLH   85 (337)
T ss_dssp             ---CCSCCEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEES--SSHHHHHHHHHHH
T ss_pred             hhhcccCceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCC--ChhHHHHHHHHHH
Confidence            444555678899999999999999999766421                   2578999999999  9999999999999


Q ss_pred             HHHHHHhhhcCCcccccccCCCCcccccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCC------
Q 012288          120 VILCSQWKASNDQTSFENANGSTHSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHP------  193 (466)
Q Consensus       120 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~------  193 (466)
                      ..|.+.+.........                            ..........++++|.++|..+|+++....      
T Consensus        86 ~~l~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~  137 (337)
T 3qn1_B           86 FALAEEIERIKDELCK----------------------------RNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVG  137 (337)
T ss_dssp             HHHHHHHHHTC----------------------------------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTT
T ss_pred             HHHHHHHHhhhhhhhc----------------------------cccccchHHHHHHHHHHHHHHhhHHHHhhhhccccc
Confidence            9999887654211000                            000011124788999999999999998754      


Q ss_pred             -------CCCccCCCceEEEEEEeCCeeEEEEeccccEEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEecc
Q 012288          194 -------AIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQ  266 (466)
Q Consensus       194 -------~~~~~~sGTTav~~li~~~~l~vanVGDSRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~  266 (466)
                             ......+|||++++++.++++|+|||||||+||+|+++     +++||.||++..+.|+.||.+.||.+....
T Consensus       138 ~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDSR~~l~r~g~-----~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~  212 (337)
T 3qn1_B          138 SSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKE-----AMPLSVDHKPDREDEYARIENAGGKVIQWQ  212 (337)
T ss_dssp             CSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESSCEEEEEETTE-----EEESCCCCCTTSHHHHHHHHHTTCCEEESS
T ss_pred             cccccccccccCCCCceEEEEEEECCEEEEEeccCcEEEEEeCCE-----eeeecCCCCCCCHHHHHHHHHcCCeEEecC
Confidence                   12346799999999999999999999999999999875     999999999999999999999999987632


Q ss_pred             CCCcceEEeccCCCCCCccccccccccccccCCcccccEEEEEEeCCCCeEEEEEcCCCCCCCCHHHHHHHHHc------
Q 012288          267 DEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFIILATDGVWDVISNKEAVEIVAS------  340 (466)
Q Consensus       267 ~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~gv~~~Pdv~~~~L~~~D~flILaSDGlwD~ls~~ei~~iv~~------  340 (466)
                          -.|+      ++.|++||+|||..+|++ ++++|++..+.+.+.++|||||||||||+|+++||++++..      
T Consensus       213 ----~~r~------~g~l~~sRalGd~~~~~~-v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~  281 (337)
T 3qn1_B          213 ----GARV------FGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWH  281 (337)
T ss_dssp             ----SEEE------TTTBSCSBCEECGGGTTT-SBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred             ----Ccee------cCccccccccccccccCC-CCCcceEEEEEeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhc
Confidence                2455      788999999999999998 99999999999976666999999999999999999999975      


Q ss_pred             ---------------CCCHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEEEeCCCC
Q 012288          341 ---------------APSQATAARALVDWAVRSWKLKYPTSKNDDCAVVCLFLEHSS  382 (466)
Q Consensus       341 ---------------~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~~  382 (466)
                                     ..+++++|+.|++.|+.+       |+.||||||||+|....
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~-------g~~DNiTvivv~l~~~~  331 (337)
T 3qn1_B          282 KKNGAPPLAERGKGIDPACQAAADYLSMLALQK-------GSKDNISIIVIDLKAQR  331 (337)
T ss_dssp             HHHCCC----CCSSCCHHHHHHHHHHHHHHHHT-------TCCSCEEEEEEECCSCC
T ss_pred             cccccccccccccccChhHHHHHHHHHHHHHHc-------CCCCCEEEEEEEecCCc
Confidence                           456789999999999999       99999999999998653
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 466
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 7e-27
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 4e-11
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (267), Expect = 7e-27
 Identities = 70/327 (21%), Positives = 107/327 (32%), Gaps = 78/327 (23%)

Query: 69  VYTQQGKKGINQDAMIVWENFSS--SDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQW 126
           + + QG +   +DA        S      F  ++DGH   G  VAK   + L   + +  
Sbjct: 25  LSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQ 82

Query: 127 KASNDQTSFENANGSTHSEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMD 186
                                             D +G         +K  +   F  +D
Sbjct: 83  ----------------------------------DFKGSAGAPSVENVKNGIRTGFLEID 108

Query: 187 KELKLHPA--IDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDL 244
           + +++          SG+TAV ++         N GDSR +L    K         T D 
Sbjct: 109 EHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKV-----HFFTQDH 163

Query: 245 KPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVP 304
           KP  P E  RIQ   G               +    +  LA++RA GDF  K        
Sbjct: 164 KPSNPLEKERIQNAGGS-------------VMIQRVNGSLAVSRALGDFDYKCVHGKGPT 210

Query: 305 DIY---------YRRLTEKDEFIILATDGVWDVISNKEAVEIVASAPSQ----ATAARAL 351
           +             R  E D+FIILA DG+WDV+ N+E  + V S              +
Sbjct: 211 EQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEV 270

Query: 352 VDWAVRSWKLKYPTSKNDDCAVVCLFL 378
           VD  +            D+ +V+ +  
Sbjct: 271 VDTCLYKG-------SRDNMSVILICF 290
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query466
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-52  Score=409.59  Aligned_cols=256  Identities=28%  Similarity=0.376  Sum_probs=219.4

Q ss_pred             eeEEecccCCCCCCCccEEeeccCCC--CCceEEEEeeCCCCChhhHHHHHHHHHHHHHHHHhhhcCCcccccccCCCCc
Q 012288           66 TACVYTQQGKKGINQDAMIVWENFSS--SDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTH  143 (466)
Q Consensus        66 ~~~~~S~~G~R~~NED~~~v~~~~~~--~~~~l~gV~DGhG~~G~~~a~~as~~l~~~L~~~~~~~~~~~~~~~~~~~~~  143 (466)
                      .+++.|.+|+|..|||++.+..++..  .+..|||||||||  |+.+|++|+++++..|.+.+.....            
T Consensus        22 ~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhG--G~~~s~~~~~~l~~~l~~~~~~~~~------------   87 (295)
T d1a6qa2          22 RYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKGS------------   87 (295)
T ss_dssp             EEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSHHHHCS------------
T ss_pred             EEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCC--ChHHHHHHHHHHHHHHHHhhhhccc------------
Confidence            57888999999999999998877644  5678999999999  9999999999999998876544321            


Q ss_pred             ccccccccccccccccccccCCCchhhhHHHHHHHHHHHHHHHHHHhhCC--CCCccCCCceEEEEEEeCCeeEEEEecc
Q 012288          144 SEETASLSMDEEGFETLDTEGDKLPEIYLPLKKSMLKSFKLMDKELKLHP--AIDCFCSGTTAVTLVKQGPDIVIGNVGD  221 (466)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~d~~l~~~~--~~~~~~sGTTav~~li~~~~l~vanVGD  221 (466)
                                            ......+.+++++.++|..+++++....  ......+|||++++++.++++|+|||||
T Consensus        88 ----------------------~~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGD  145 (295)
T d1a6qa2          88 ----------------------AGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGD  145 (295)
T ss_dssp             ----------------------SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESS
T ss_pred             ----------------------cccchHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCC
Confidence                                  1122335678888888888888775432  2235678999999999999999999999


Q ss_pred             ccEEEEEeCCCCcEEEEEeeccCCCCCHHHHHHHHhcCCeEEeccCCCcceEEeccCCCCCCccccccccccccccCC--
Q 012288          222 SRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFG--  299 (466)
Q Consensus       222 SRa~l~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rv~~~~~~~~~LaltRalGd~~~K~~g--  299 (466)
                      ||+|+++++.     +++||.||++..+.|+.||...||.|..       .|+      +|.|++||||||..+|..+  
T Consensus       146 SR~~l~~~~~-----~~~lT~dH~~~~~~E~~Ri~~~gg~v~~-------~r~------~g~l~~tRa~Gd~~~k~~~~~  207 (295)
T d1a6qa2         146 SRGLLCRNRK-----VHFFTQDHKPSNPLEKERIQNAGGSVMI-------QRV------NGSLAVSRALGDFDYKCVHGK  207 (295)
T ss_dssp             CEEEEEETTE-----EEEECCCCCTTSHHHHHHHHHTTCCEET-------TEE------TTTBSCSBCEECGGGSCCTTC
T ss_pred             CeEEEeeccc-----ceeeccccCcccHHHHhhHhhcCCcccc-------ccc------CCceeeeeccCcHHhhhcccc
Confidence            9999999875     9999999999999999999999999853       344      8899999999999998654  


Q ss_pred             ------cccccEEEEEEeC-CCCeEEEEEcCCCCCCCCHHHHHHHHHc----CCCHHHHHHHHHHHHHHhccccCCCCCC
Q 012288          300 ------LISVPDIYYRRLT-EKDEFIILATDGVWDVISNKEAVEIVAS----APSQATAARALVDWAVRSWKLKYPTSKN  368 (466)
Q Consensus       300 ------v~~~Pdv~~~~L~-~~D~flILaSDGlwD~ls~~ei~~iv~~----~~~~~~aA~~Lv~~A~~~w~~~~~~g~~  368 (466)
                            ++++|++..+.+. ++|+|||||||||||+|+++||+++|..    ..+++.+|+.|++.|+.+       ++.
T Consensus       208 ~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~-------gs~  280 (295)
T d1a6qa2         208 GPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYK-------GSR  280 (295)
T ss_dssp             CGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT-------TCC
T ss_pred             CcccccccccccceEEEeecccceeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhc-------CCC
Confidence                  8999999999985 5667999999999999999999999865    368999999999999999       999


Q ss_pred             CcEEEEEEEeCCCC
Q 012288          369 DDCAVVCLFLEHSS  382 (466)
Q Consensus       369 DNiTvIvv~l~~~~  382 (466)
                      ||||||||+|+..|
T Consensus       281 DNiTvivv~~~~~~  294 (295)
T d1a6qa2         281 DNMSVILICFPNAP  294 (295)
T ss_dssp             SCEEEEEEECTTSC
T ss_pred             CCeEEEEEeccCCC
Confidence            99999999998765
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure