Citrus Sinensis ID: 012330

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460------
MDFLSIPFSFKALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQVSTVSRLLIKQFSKCFWSCIT
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHccHHHHHHHHHHHHcccEEEEccccccEEEccHHHHHHHHHcccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccccccHHHHcccHHHHHHHHccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEccHHHHHHcccccHHHHHHHHHHcccEEEEcccccEEEEccHHHHHHHHHHccHHHcccccHHHHHHHccccEEEccccHHHHHHHHHHHHHHcHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccEcccccccccHHHHHHHHHHHHHHHHHccHHcHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccccHHHHHccccHHHHHHcHHHHHHHHHHHHcccccccccccccHcccccccEEcccccEEEEEEEEEccccccccccHHHcccHHHccccccccccccEEEEEccccccccccccHEEEEEEcccc
MDFLSIPFSFKALAIALAILVVQIVTKTLtqksgnkqkkyhpiggtvFNQLLNFNRLHHYMTDLAakhgtyrllgpfrsevyssdpanVEYMLKTnfdnygkgsynYSILKDLLgdgiftvdgekwreqrkisshEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVEldsvcgsneegtrfssafddASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRflqvtdpkyLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETlrlypavpvdakmcfsddtlpdgfsvrkgdMVCYQAYAMGRMKfiwgddaeefkperwldengifqkespfkftaFQVSTVSRLLIKQFSKCFWSCIT
MDFLSIPFSFKALAIALAILVVQIVTKTltqksgnkqkkyhpiGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREqrkisshefstKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVcgsneegtrfssafddaSAMTLWRYVDIFWKIKKLLnigsearlkqrieVIDTFVYKIIRKKTDQMHDFQEEYtsmkkedilSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQVSTVSRLLIKQFSKCFWSCIT
MDFLSIPFSFKalaialailvvqivTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQVSTVSRLLIKQFSKCFWSCIT
**FLSIPFSFKALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQVSTVSRLLIKQFSKCFWSCI*
MDFLSIPFSFKALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDS*****EE*TRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKII**********************LSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATG**********AGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQVSTVSRLLIKQFSKCFWSCIT
MDFLSIPFSFKALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQVSTVSRLLIKQFSKCFWSCIT
MDFLSIPFSFKALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDF****TSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQVSTVSRLLIKQFSKCFWSCIT
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDFLSIPFSFKALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIxxxxxxxxxxxxxxxxxxxxxDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQVSTVSRLLIKQFSKCFWSCIT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query466 2.2.26 [Sep-21-2011]
Q50EK3518 Cytochrome P450 704C1 OS= N/A no 0.933 0.839 0.485 1e-128
O81117514 Cytochrome P450 94A1 OS=V N/A no 0.866 0.785 0.363 5e-80
Q9FMY1559 Cytochrome P450 86B1 OS=A no no 0.860 0.717 0.386 2e-77
P98188513 Cytochrome P450 94A2 OS=V N/A no 0.834 0.758 0.385 9e-76
O23066553 Cytochrome P450 86A2 OS=A no no 0.875 0.737 0.361 7e-73
P48422513 Cytochrome P450 86A1 OS=A no no 0.839 0.762 0.377 2e-67
Q9Y758519 Cytochrome P450 52A13 OS= yes no 0.723 0.649 0.320 1e-39
Q12588519 Cytochrome P450 52A10 OS= N/A no 0.718 0.645 0.336 5e-38
P16141538 Cytochrome P450 52A4 OS=C N/A no 0.693 0.600 0.298 2e-37
Q12589519 Cytochrome P450 52A11 OS= N/A no 0.718 0.645 0.330 3e-37
>sp|Q50EK3|C04C1_PINTA Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 PE=2 SV=1 Back     alignment and function desciption
 Score =  459 bits (1180), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 225/463 (48%), Positives = 327/463 (70%), Gaps = 28/463 (6%)

Query: 1   MDFLSIPFSFKALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHY 60
           ++ L++  +  ALA+A ++ +   +      ++  K+  Y P+ GT+ N  +NF RLH Y
Sbjct: 3   VNILTMFVTVSALALACSLWIASYL------RNWRKKGVYPPVVGTMLNHAINFERLHDY 56

Query: 61  MTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFT 120
            TD A ++ T+R++ P  S V+++DP NVE++LKTNF NY KG++NY I+KDLLGDGIF 
Sbjct: 57  HTDQAQRYKTFRVVYPTCSYVFTTDPVNVEHILKTNFANYDKGTFNYDIMKDLLGDGIFN 116

Query: 121 VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKS 180
           VDG+KWR+QRK++S EF++KVL+DFSS  F  NAAKLA +L++AA  +  +++QDLFM+S
Sbjct: 117 VDGDKWRQQRKLASSEFASKVLKDFSSGVFCNNAAKLANILAQAAKLNLSVEMQDLFMRS 176

Query: 181 TLDSIFKVAFGVELDSVCGSNEEG---TRFSSAFDDASAMTLWRY-VDIFWKIKKLLNIG 236
           +LDSI KV FG++++S+  S  E      F+ AFD A+AM   R+ V  FWK+++  N+G
Sbjct: 177 SLDSICKVVFGIDINSLSSSKAESGPEASFAKAFDVANAMVFHRHMVGSFWKVQRFFNVG 236

Query: 237 SEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDP-------- 288
           SEA L+  I+++D F+YK+I  +  +M   ++E     + DILSR++ ++D         
Sbjct: 237 SEAILRDNIKMVDDFLYKVIHFRRQEMFSAEKENV---RPDILSRYIIISDKETDGKVSD 293

Query: 289 KYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATG------AKDISD 342
           KYLRD+ILNF++A +DTTA  LSWFIYMLCKH  VQEK+++E+  +T       + + +D
Sbjct: 294 KYLRDVILNFMVAARDTTAIALSWFIYMLCKHQHVQEKLLEEIISSTSVHEDQYSTECND 353

Query: 343 FLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCY 402
               A  +++EAL KMHYLHA+++ETLRLYPA+PVD K   ++DTLPDGF V+KGD V +
Sbjct: 354 IASFAQSLTDEALGKMHYLHASLSETLRLYPALPVDGKYVVNEDTLPDGFKVKKGDSVNF 413

Query: 403 QAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQ 445
             YAMGRM ++WGDDA+EFKPERW+ ++GIF  +SPFKF AFQ
Sbjct: 414 LPYAMGRMSYLWGDDAKEFKPERWI-QDGIFHPKSPFKFPAFQ 455

Pinus taeda (taxid: 3352)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -
>sp|O81117|C94A1_VICSA Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2 Back     alignment and function description
>sp|Q9FMY1|C86B1_ARATH Cytochrome P450 86B1 OS=Arabidopsis thaliana GN=CYP86B1 PE=2 SV=1 Back     alignment and function description
>sp|P98188|C94A2_VICSA Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE=2 SV=1 Back     alignment and function description
>sp|O23066|C86A2_ARATH Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CYP86A2 PE=2 SV=1 Back     alignment and function description
>sp|P48422|C86A1_ARATH Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CYP86A1 PE=1 SV=2 Back     alignment and function description
>sp|Q9Y758|CP52M_DEBHN Cytochrome P450 52A13 OS=Debaryomyces hansenii GN=CYP52A13 PE=2 SV=1 Back     alignment and function description
>sp|Q12588|CP52J_CANMA Cytochrome P450 52A10 OS=Candida maltosa GN=CYP52A10 PE=2 SV=1 Back     alignment and function description
>sp|P16141|CP52D_CANMA Cytochrome P450 52A4 OS=Candida maltosa GN=CYP52A4 PE=1 SV=3 Back     alignment and function description
>sp|Q12589|CP52K_CANMA Cytochrome P450 52A11 OS=Candida maltosa GN=CYP52A11 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query466
224127430509 cytochrome P450 [Populus trichocarpa] gi 0.948 0.868 0.733 0.0
296089094515 unnamed protein product [Vitis vinifera] 0.946 0.856 0.723 0.0
296089093515 unnamed protein product [Vitis vinifera] 0.946 0.856 0.721 0.0
147765747515 hypothetical protein VITISV_002118 [Viti 0.946 0.856 0.723 0.0
225453789505 PREDICTED: cytochrome P450 704C1 [Vitis 0.929 0.857 0.732 0.0
359489500515 PREDICTED: cytochrome P450 704C1-like [V 0.946 0.856 0.717 0.0
359489502505 PREDICTED: cytochrome P450 704C1-like [V 0.929 0.857 0.728 0.0
71726950499 cytochrome P450 monooxygenase [Petunia x 0.929 0.867 0.733 0.0
224127438508 cytochrome P450 [Populus trichocarpa] gi 0.946 0.868 0.715 0.0
118485860508 unknown [Populus trichocarpa] 0.946 0.868 0.713 0.0
>gi|224127430|ref|XP_002320072.1| cytochrome P450 [Populus trichocarpa] gi|222860845|gb|EEE98387.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  705 bits (1819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/447 (73%), Positives = 391/447 (87%), Gaps = 5/447 (1%)

Query: 1   MDFLSIPFSFKALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHY 60
           +D LS PF+  AL + L+I  VQ+  + L +K   ++ KYHP+GGTVFNQLLNFNRLHHY
Sbjct: 4   IDSLSNPFTLSALVLILSIFTVQLSIRKLNKKQ--EKHKYHPVGGTVFNQLLNFNRLHHY 61

Query: 61  MTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFT 120
           MTDLA K+ TYRL+ PFRSEVY++DP NVEY+LKTNF+NYGKG +NY+ L  LLGDGIFT
Sbjct: 62  MTDLAGKYKTYRLIAPFRSEVYTADPVNVEYILKTNFENYGKGDHNYNNLSGLLGDGIFT 121

Query: 121 VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKS 180
           VDG+KWR+QRK+SSHEFSTKVLRDFSS  FRKN AKLA ++SEAA +++ +DIQDLFMKS
Sbjct: 122 VDGDKWRQQRKVSSHEFSTKVLRDFSSVVFRKNVAKLANIVSEAAKANQSMDIQDLFMKS 181

Query: 181 TLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEAR 240
           TLDSIFKVAFGVELDS+CGSNEEG +F+SAFDDASA+TLWRYVD+FWKIK+  NIGSEA 
Sbjct: 182 TLDSIFKVAFGVELDSMCGSNEEGVKFTSAFDDASALTLWRYVDVFWKIKRFFNIGSEAA 241

Query: 241 LKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVT--DPKYLRDIILNF 298
           LK+ ++V++ FVYK+I KK + M +  EE +S+KK+DILSRFLQVT  DP YLRDIILNF
Sbjct: 242 LKKNVKVVNDFVYKLINKKIELMRN-SEEVSSLKKDDILSRFLQVTESDPTYLRDIILNF 300

Query: 299 VIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKM 358
           VIAGKDTTAA LSWFIYMLCK+PAVQ+K+ QEV+EAT  K+I++F + A  I++EALEKM
Sbjct: 301 VIAGKDTTAAALSWFIYMLCKYPAVQKKVAQEVREATKVKEITNFAEFAASINDEALEKM 360

Query: 359 HYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDA 418
           +YLHAAITETLRLYP+VPVDAK+CFSDDTLPDGF+VRKGDMV YQ YAMGRMKFIWGDDA
Sbjct: 361 NYLHAAITETLRLYPSVPVDAKVCFSDDTLPDGFNVRKGDMVAYQPYAMGRMKFIWGDDA 420

Query: 419 EEFKPERWLDENGIFQKESPFKFTAFQ 445
           EE+KPERWL+E+G+FQ+ESPFKFTAFQ
Sbjct: 421 EEYKPERWLNEDGVFQQESPFKFTAFQ 447

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296089094|emb|CBI38797.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|296089093|emb|CBI38796.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147765747|emb|CAN60189.1| hypothetical protein VITISV_002118 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225453789|ref|XP_002270673.1| PREDICTED: cytochrome P450 704C1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359489500|ref|XP_002270594.2| PREDICTED: cytochrome P450 704C1-like [Vitis vinifera] gi|296089092|emb|CBI38795.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359489502|ref|XP_002270628.2| PREDICTED: cytochrome P450 704C1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|71726950|gb|AAZ39646.1| cytochrome P450 monooxygenase [Petunia x hybrida] Back     alignment and taxonomy information
>gi|224127438|ref|XP_002320074.1| cytochrome P450 [Populus trichocarpa] gi|222860847|gb|EEE98389.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118485860|gb|ABK94777.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query466
TAIR|locus:2043634511 CYP704A2 ""cytochrome P450, fa 0.886 0.808 0.553 7.7e-119
TAIR|locus:2054960505 CYP704A1 ""cytochrome P450, fa 0.905 0.835 0.515 2.9e-112
TAIR|locus:2007181524 CYP704B1 ""cytochrome P450, fa 0.639 0.568 0.445 4.2e-96
TAIR|locus:2102639499 CYP94D2 ""cytochrome P450, fam 0.836 0.781 0.434 2.2e-80
TAIR|locus:2009278498 CYP94D1 ""cytochrome P450, fam 0.860 0.805 0.417 8.7e-79
TAIR|locus:2166786559 CYP86B1 ""cytochrome P450, fam 0.813 0.677 0.400 7.5e-73
TAIR|locus:2181579488 AT5G08250 [Arabidopsis thalian 0.819 0.782 0.393 1.6e-72
TAIR|locus:2126051553 CYP86A2 ""cytochrome P450, fam 0.866 0.730 0.365 1.7e-68
TAIR|locus:2026659523 CYP86A7 ""cytochrome P450, fam 0.864 0.770 0.367 1.5e-67
TAIR|locus:2050787537 CYP86A8 ""cytochrome P450, fam 0.864 0.750 0.362 8.2e-67
TAIR|locus:2043634 CYP704A2 ""cytochrome P450, family 704, subfamily A, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1170 (416.9 bits), Expect = 7.7e-119, P = 7.7e-119
 Identities = 236/426 (55%), Positives = 304/426 (71%)

Query:    27 KTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDP 86
             +  T KS N  K+Y P+  TVF+ L + + L+ Y T++A +  TYR L P +SE+ ++DP
Sbjct:    28 RIFTGKSRN-DKRYAPVHATVFDLLFHSDELYDYETEIAREKPTYRFLSPGQSEILTADP 86

Query:    87 ANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFS 146
              NVE++LKT FDNY KG  +   + DLLG GIF VDGEKWR+QRK+SS EFST+VLRDFS
Sbjct:    87 RNVEHILKTRFDNYSKGHSSRENMADLLGHGIFAVDGEKWRQQRKLSSFEFSTRVLRDFS 146

Query:   147 SAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTR 206
              + FR+NA+KL   +SE A S K  D QDL M+ TLDSIFKV FGVEL  + G ++EG  
Sbjct:   147 CSVFRRNASKLVGFVSEFALSGKAFDAQDLLMRCTLDSIFKVGFGVELKCLDGFSKEGQE 206

Query:   207 FSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDF 266
             F  AFD+ +  T  R++D  WK+K   NIGS+++LK+ I  ID FVY +I  K  ++   
Sbjct:   207 FMEAFDEGNVATSSRFIDPLWKLKWFFNIGSQSKLKKSIATIDKFVYSLITTKRKEL--- 263

Query:   267 QEEYTSMKKEDILSRFLQVT--DP-----KYLRDIILNFVIAGKDTTAATLSWFIYMLCK 319
              +E  ++ +EDILSRFL  +  DP     KYLRDIILNF+IAGKDTTAA LSWF+YMLCK
Sbjct:   264 AKEQNTVVREDILSRFLVESEKDPENMNDKYLRDIILNFMIAGKDTTAALLSWFLYMLCK 323

Query:   320 HPAVQEKIVQEVKEATGAKD-ISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVD 378
             +P VQEKIVQE+++ T + +  +D       I+EEAL++MHYLHAA++ETLRLYP VPVD
Sbjct:   324 NPLVQEKIVQEIRDVTFSHEKTTDVNGFVESINEEALDEMHYLHAALSETLRLYPPVPVD 383

Query:   379 AKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESP 438
              +   +DD LPDG  V KGD + Y AYAMGRM +IWG DAEEFKPERWL ++G+FQ ESP
Sbjct:   384 MRCAENDDVLPDGHRVSKGDNIYYIAYAMGRMTYIWGQDAEEFKPERWL-KDGLFQPESP 442

Query:   439 FKFTAF 444
             FKF +F
Sbjct:   443 FKFISF 448
GO:0005506 "iron ion binding" evidence=IEA
GO:0009055 "electron carrier activity" evidence=IEA
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0019825 "oxygen binding" evidence=ISS
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
TAIR|locus:2054960 CYP704A1 ""cytochrome P450, family 704, subfamily A, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007181 CYP704B1 ""cytochrome P450, family 704, subfamily B, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102639 CYP94D2 ""cytochrome P450, family 94, subfamily D, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009278 CYP94D1 ""cytochrome P450, family 94, subfamily D, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166786 CYP86B1 ""cytochrome P450, family 86, subfamily B, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2181579 AT5G08250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2126051 CYP86A2 ""cytochrome P450, family 86, subfamily A, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026659 CYP86A7 ""cytochrome P450, family 86, subfamily A, polypeptide 7"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050787 CYP86A8 ""cytochrome P450, family 86, subfamily A, polypeptide 8"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query466
PLN03195516 PLN03195, PLN03195, fatty acid omega-hydroxylase; 1e-159
PLN02426502 PLN02426, PLN02426, cytochrome P450, family 94, su 1e-109
PLN02169500 PLN02169, PLN02169, fatty acid (omega-1)-hydroxyla 2e-63
pfam00067461 pfam00067, p450, Cytochrome P450 3e-55
COG2124411 COG2124, CypX, Cytochrome P450 [Secondary metaboli 5e-36
PLN02738633 PLN02738, PLN02738, carotene beta-ring hydroxylase 1e-35
PLN02936489 PLN02936, PLN02936, epsilon-ring hydroxylase 4e-31
PLN02687517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 6e-24
PLN02966502 PLN02966, PLN02966, cytochrome P450 83A1 3e-23
PLN03234499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 5e-23
PTZ00404482 PTZ00404, PTZ00404, cytochrome P450; Provisional 2e-22
PLN02183516 PLN02183, PLN02183, ferulate 5-hydroxylase 1e-21
PLN03112514 PLN03112, PLN03112, cytochrome P450 family protein 1e-20
PLN02655466 PLN02655, PLN02655, ent-kaurene oxidase 2e-17
PLN02290516 PLN02290, PLN02290, cytokinin trans-hydroxylase 6e-17
PLN00168519 PLN00168, PLN00168, Cytochrome P450; Provisional 6e-16
PLN02394503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 1e-15
PLN00110504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 2e-15
PLN02971543 PLN02971, PLN02971, tryptophan N-hydroxylase 3e-12
PLN03018534 PLN03018, PLN03018, homomethionine N-hydroxylase 5e-12
PLN02648480 PLN02648, PLN02648, allene oxide synthase 2e-09
PLN02302490 PLN02302, PLN02302, ent-kaurenoic acid oxidase 8e-08
PLN02500490 PLN02500, PLN02500, cytochrome P450 90B1 3e-05
PLN02196463 PLN02196, PLN02196, abscisic acid 8'-hydroxylase 0.001
>gnl|CDD|215627 PLN03195, PLN03195, fatty acid omega-hydroxylase; Provisional Back     alignment and domain information 
 Score =  459 bits (1183), Expect = e-159
 Identities = 213/460 (46%), Positives = 299/460 (65%), Gaps = 23/460 (5%)

Query: 6   IPFSFKALAIALAILVVQIVTKTLTQKSGNKQK--KYHPIGGTVFNQLLNFNRLHHYMTD 63
           + F    ++  L I +  +    + + S   +K  K  PI G    QL N++R+H ++ +
Sbjct: 1   MKFPVSGMSGVLFIALAVLSWIFIHRWSQRNRKGPKSWPIIGAALEQLKNYDRMHDWLVE 60

Query: 64  LAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDG 123
             +K  T  +  PF +  Y +DP NVE++LKTNF NY KG   +S ++ LLGDGIF VDG
Sbjct: 61  YLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEVLLGDGIFNVDG 120

Query: 124 EKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLD 183
           E WR+QRK +S EF++K LRDFS+  FR+ + KL+ +LS+A+ +++++D+QDLFM+ TLD
Sbjct: 121 ELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLD 180

Query: 184 SIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQ 243
           SI KV FGVE+ ++  S  E   F+ AFD A+ +   R++D  WK+KK LNIGSEA L +
Sbjct: 181 SICKVGFGVEIGTLSPSLPE-NPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSK 239

Query: 244 RIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQV-TDP------KYLRDIIL 296
            I+V+D F Y +IR++  +M + ++    + K DILSRF+++  DP      K LRDI+L
Sbjct: 240 SIKVVDDFTYSVIRRRKAEMDEARKSGKKV-KHDILSRFIELGEDPDSNFTDKSLRDIVL 298

Query: 297 NFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEV----KEATGAKDISDF-------LK 345
           NFVIAG+DTTA TLSWF+YM+  +P V EK+  E+    KE    +D  D         +
Sbjct: 299 NFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQ 358

Query: 346 VAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAY 405
            AG ++ ++L K+ YLHA ITETLRLYPAVP D K    DD LPDG  V+ G MV Y  Y
Sbjct: 359 FAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPY 418

Query: 406 AMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQ 445
           +MGRM++ WG DA  FKPERW+ ++G+FQ  SPFKFTAFQ
Sbjct: 419 SMGRMEYNWGPDAASFKPERWI-KDGVFQNASPFKFTAFQ 457

Length = 516
>gnl|CDD|215235 PLN02426, PLN02426, cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>gnl|CDD|177826 PLN02169, PLN02169, fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase Back     alignment and domain information
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase Back     alignment and domain information
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase Back     alignment and domain information
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase Back     alignment and domain information
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase Back     alignment and domain information
>gnl|CDD|215350 PLN02648, PLN02648, allene oxide synthase Back     alignment and domain information
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase Back     alignment and domain information
>gnl|CDD|215276 PLN02500, PLN02500, cytochrome P450 90B1 Back     alignment and domain information
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 466
KOG0156489 consensus Cytochrome P450 CYP2 subfamily [Secondar 100.0
KOG0158499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 100.0
KOG0157497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 100.0
PLN02169500 fatty acid (omega-1)-hydroxylase/midchain alkane h 100.0
PLN03195516 fatty acid omega-hydroxylase; Provisional 100.0
PLN02971543 tryptophan N-hydroxylase 100.0
PTZ00404482 cytochrome P450; Provisional 100.0
PLN02290516 cytokinin trans-hydroxylase 100.0
PLN03234499 cytochrome P450 83B1; Provisional 100.0
PLN02183516 ferulate 5-hydroxylase 100.0
PLN02500490 cytochrome P450 90B1 100.0
PLN00168519 Cytochrome P450; Provisional 100.0
PLN02687517 flavonoid 3'-monooxygenase 100.0
PLN00110504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 100.0
PLN03112514 cytochrome P450 family protein; Provisional 100.0
PLN02966502 cytochrome P450 83A1 100.0
KOG0159519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 100.0
PLN02394503 trans-cinnamate 4-monooxygenase 100.0
PLN02774463 brassinosteroid-6-oxidase 100.0
PLN02426502 cytochrome P450, family 94, subfamily C protein 100.0
PLN02738633 carotene beta-ring hydroxylase 100.0
PLN02196463 abscisic acid 8'-hydroxylase 100.0
PF00067463 p450: Cytochrome P450 p450 superfamily signature b 100.0
PLN03018534 homomethionine N-hydroxylase 100.0
PLN02655466 ent-kaurene oxidase 100.0
PLN02936489 epsilon-ring hydroxylase 100.0
PLN02987472 Cytochrome P450, family 90, subfamily A 100.0
PLN03141452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 100.0
PLN02302490 ent-kaurenoic acid oxidase 100.0
KOG0684486 consensus Cytochrome P450 [Secondary metabolites b 100.0
PLN02648480 allene oxide synthase 100.0
COG2124411 CypX Cytochrome P450 [Secondary metabolites biosyn 100.0
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information 
Probab=100.00  E-value=1e-73  Score=528.14  Aligned_cols=405  Identities=26%  Similarity=0.361  Sum_probs=328.9

Q ss_pred             HHHhhhcccCCCCCCCCCCcchhhhhhcchhhHHHHHHHHHhhcCc-eEEecCCcceEEecChhhHHHhhhcCCCCCCCc
Q 012330           25 VTKTLTQKSGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGT-YRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKG  103 (466)
Q Consensus        25 ~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~-~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~  103 (466)
                      +.+.+.+.+.||||+++|++||++++...  .++..++++.++||+ |.+++|+.++|||+|+++++|++.+++..|+.|
T Consensus        18 ~~~~~~~~~lPPGP~~lPiIGnl~~l~~~--~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~R   95 (489)
T KOG0156|consen   18 FKKYRKRRNLPPGPPPLPIIGNLHQLGSL--PPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADR   95 (489)
T ss_pred             HHhccCCCCCCcCCCCCCccccHHHcCCC--chhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCC
Confidence            33344447899999999999999888544  689999999999996 899999999999999999999999999999999


Q ss_pred             hhhHHHHHhhc--cCceeec-CCcchHHHHhhhhhc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceehHHhHHH
Q 012330          104 SYNYSILKDLL--GDGIFTV-DGEKWREQRKISSHE-FSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMK  179 (466)
Q Consensus       104 ~~~~~~~~~~~--~~~l~~~-~g~~w~~~R~~l~~~-~s~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~  179 (466)
                      +........+.  +.+++.+ +|+.|+.+||..... ++...++...+ ...++++.+++.+.+ ...+.+||+...+..
T Consensus        96 p~~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~-~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~  173 (489)
T KOG0156|consen   96 PDPTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFME-IREEEVDELVKKLSK-SKKGEPVDLSELLDL  173 (489)
T ss_pred             CCchhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHH-HHHHHHHHHHHHHHh-cCCCceeeHHHHHHH
Confidence            86221223332  3677776 999999999988765 78888888774 557888888888887 323389999999999


Q ss_pred             HHHHHHHHHHhcCCCcccCCCCCCcchhHHHHHHHHHHhHhhhh-hhhHHHHHHhcc--CchHHHHHHHHHHHHHHHHHH
Q 012330          180 STLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYV-DIFWKIKKLLNI--GSEARLKQRIEVIDTFVYKII  256 (466)
Q Consensus       180 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~i  256 (466)
                      ++.++|++++||.++...+  +++..++.+.+.+.......... +.+|.+.++++.  ...+.......++..++++.+
T Consensus       174 ~~~nvI~~~~fG~rf~~~~--~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i  251 (489)
T KOG0156|consen  174 LVGNVICRMLFGRRFEEED--EEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERII  251 (489)
T ss_pred             HHHHHHHHHHhCCccccCC--chHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998642  12234466666666655553333 333323444432  234566666666999999999


Q ss_pred             HHHHHhhhhhhhhhhccchhhHHHHhhccC--------ChhHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcChHHHHHHH
Q 012330          257 RKKTDQMHDFQEEYTSMKKEDILSRFLQVT--------DPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV  328 (466)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~--------~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~  328 (466)
                      ++++++. ..+      ...|++|.|++..        ++++|.+.+.++++||+|||++++.|++.+|++||++|+|++
T Consensus       252 ~eh~~~~-~~~------~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~q  324 (489)
T KOG0156|consen  252 DEHREKI-GDE------EGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQ  324 (489)
T ss_pred             HHHHhhh-ccC------CCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHH
Confidence            9998876 211      1279999999763        678899999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCcchhhhhcCCCCHHHhhcChhHHHHHHhHhccCCCCCCC-cccccccccCCCCeeecCCCEEEEeeccc
Q 012330          329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVD-AKMCFSDDTLPDGFSVRKGDMVCYQAYAM  407 (466)
Q Consensus       329 ~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~-~r~~~~~~~~~~g~~ip~G~~v~~~~~~~  407 (466)
                      +||++++|.++.         ++.+|+.+||||+|||+|++|++|+.|.. +|.+.+|+.+ +||.|||||.|.++.|++
T Consensus       325 eEId~vvG~~r~---------v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i-~Gy~IPkgT~v~vn~~ai  394 (489)
T KOG0156|consen  325 EEIDEVVGKGRL---------VSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKI-GGYDIPKGTTVLVNLWAI  394 (489)
T ss_pred             HHHHHHhCCCCC---------CChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeE-cCEEcCCCCEEEEeehhh
Confidence            999999998852         68999999999999999999999999987 5666666655 999999999999999999


Q ss_pred             ccCCCCccCCCCCcCCCcccCCCCCccccCCCccccCCCCcccccccc
Q 012330          408 GRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQVSTVSRLLIK  455 (466)
Q Consensus       408 ~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~  455 (466)
                      |+||++| +||++|+||||++++ ..+. ....++|||.|+|+|||+.
T Consensus       395 ~rDp~vw-~dP~eF~PERFl~~~-d~~~-~~~~~iPFG~GRR~CpG~~  439 (489)
T KOG0156|consen  395 HRDPKVW-EDPEEFKPERFLDSN-DGKG-LDFKLIPFGSGRRICPGEG  439 (489)
T ss_pred             hcCCccC-CCccccChhhhcCCc-cccC-CceEecCCCCCcCCCCcHH
Confidence            9999999 999999999999985 1112 5677999999999999986

>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query466
3cbd_A455 Directed Evolution Of Cytochrome P450 Bm3, To Octan 3e-23
1zoa_A473 Crystal Structure Of A328v Mutant Of The Heme Domai 1e-22
3psx_A487 Crystal Structure Of The Kt2 Mutant Of Cytochrome P 2e-22
2uwh_A458 Cytochrome P450 Bm3 Mutant In Complex With Palmitic 2e-22
3hf2_A482 Crystal Structure Of The I401p Mutant Of Cytochrome 3e-22
1bvy_A458 Complex Of The Heme And Fmn-Binding Domains Of The 4e-22
1jpz_A473 Crystal Structure Of A Complex Of The Heme Domain O 4e-22
3ben_A470 Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine 4e-22
2ij2_A470 Atomic Structure Of The Heme Domain Of Flavocytochr 4e-22
3kx4_A470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 4e-22
2nnb_A471 The Q403k Mutnat Heme Domain Of Flavocytochrome P45 4e-22
2bmh_A455 Modeling Protein-Substrate Interactions In The Heme 4e-22
2hpd_A471 Crystal Structure Of Hemoprotein Domain Of P450bm-3 4e-22
3m4v_A482 Crystal Structure Of The A330p Mutant Of Cytochrome 4e-22
1zo4_A473 Crystal Structure Of A328s Mutant Of The Heme Domai 6e-22
1p0x_A455 F393y Mutant Heme Domain Of Flavocytochrome P450 Bm 7e-22
1jme_A455 Crystal Structure Of Phe393his Cytochrome P450 Bm3 7e-22
1p0v_A455 F393a Mutant Heme Domain Of Flavocytochrome P450 Bm 8e-22
1p0w_A455 F393w Mutant Heme Domain Of Flavocytochrome P450 Bm 9e-22
3ekb_A470 Crystal Structure Of The A264c Mutant Heme Domain O 1e-21
1yqp_A455 T268n Mutant Cytochrome Domain Of Flavocytochrome P 1e-21
3ekd_A470 Crystal Structure Of The A264m Heme Domain Of Cytoc 1e-21
2q9f_A456 Crystal Structure Of Human Cytochrome P450 46a1 In 1e-21
2ij4_A470 Structure Of The A264k Mutant Of Cytochrome P450 Bm 1e-21
3ekf_A470 Crystal Structure Of The A264q Heme Domain Of Cytoc 2e-21
1yqo_A455 T268a Mutant Heme Domain Of Flavocytochrome P450 Bm 2e-21
1fah_A471 Structure Of Cytochrome P450 Length = 471 2e-21
3kx3_A470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 2e-21
2ij3_A470 Structure Of The A264h Mutant Of Cytochrome P450 Bm 2e-21
1smi_A471 A Single Mutation Of P450 Bm3 Induces The Conformat 2e-21
2x7y_A455 P450 Bm3 F87a In Complex With Dmso Length = 455 4e-21
4dud_A471 Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand Le 4e-21
4duc_A472 Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand Leng 4e-21
4duf_A471 Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Seroto 4e-21
3kx5_A470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 5e-21
4du2_B470 Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamin 6e-21
4dub_A472 Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopami 1e-20
4dua_A471 Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand Leng 1e-20
3dgi_A461 Crystal Structure Of F87aT268A MUTANT OF CYP BM3 Le 1e-20
3npl_A470 Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme D 2e-20
3qi8_B472 Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1) 3e-20
4dtw_B469 Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Seroto 3e-20
3ua1_A487 Crystal Structure Of The Cytochrome P4503a4-Bromoer 2e-18
1w0e_A485 Crystal Structure Of Human Cytochrome P450 3a4 Leng 2e-18
1tqn_A486 Crystal Structure Of Human Microsomal P450 3a4 Leng 3e-18
3eqm_A503 Crystal Structure Of Human Placental Aromatase Cyto 2e-14
3dbg_A467 Crystal Structure Of Cytochrome P450 170a1 (Cyp170a 2e-13
4dvq_A483 Structure Of Human Aldosterone Synthase, Cyp11b2, I 1e-11
3c6g_A479 Crystal Structure Of Cyp2r1 In Complex With Vitamin 4e-11
3czh_A481 Crystal Structure Of Cyp2r1 In Complex With Vitamin 4e-11
3k9v_A482 Crystal Structure Of Rat Mitochondrial P450 24a1 S5 5e-11
3qz1_A496 Crystal Structure Of Bovine Steroid Of 21-Hydroxyla 2e-10
1z10_A476 Crystal Structure Of Human Microsomal P450 2a6 With 2e-10
1suo_A476 Structure Of Mammalian Cytochrome P450 2b4 With Bou 5e-10
1po5_A476 Structure Of Mammalian Cytochrome P450 2b4 Length = 5e-10
3tk3_A476 Cytochrome P450 2b4 Mutant L437a In Complex With 4- 5e-10
2q6n_A478 Structure Of Cytochrome P450 2b4 With Bound 1-(4- C 7e-10
3ebs_A476 Human Cytochrome P450 2a6 I208sI300FG301AS369G IN C 9e-10
3ld6_A461 Crystal Structure Of Human Lanosterol 14alpha-Demet 9e-10
4h1n_A479 Crystal Structure Of P450 2b4 F297a Mutant In Compl 1e-09
2pg5_A476 Crystal Structure Of Human Microsomal P450 2a6 N297 1e-09
3e4e_A476 Human Cytochrome P450 2e1 In Complex With The Inhib 2e-09
2pg6_A476 Crystal Structure Of Human Microsomal P450 2a6 L240 2e-09
2ve3_A444 Retinoic Acid Bound Cyanobacterial Cyp120a1 Length 2e-09
2pg7_A476 Crystal Structure Of Human Microsomal P450 2a6 N297 2e-09
3qm4_A479 Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Compl 6e-09
3n9y_A487 Crystal Structure Of Human Cyp11a1 In Complex With 7e-09
3na0_A471 Crystal Structure Of Human Cyp11a1 In Complex With 8e-09
2f9q_A479 Crystal Structure Of Human Cytochrome P450 2d6 Leng 8e-09
4i8v_A491 Human Cytochrome P450 1a1 In Complex With Alpha-nap 1e-08
3ibd_A476 Crystal Structure Of A Cytochrome P450 2b6 Genetic 1e-08
2p85_A476 Structure Of Human Lung Cytochrome P450 2a13 With I 6e-08
3mzs_A486 Crystal Structure Of Cytochrome P450 Cyp11a1 In Com 7e-08
3pm0_A507 Structural Characterization Of The Complex Between 9e-08
3ruk_A494 Human Cytochrome P450 Cyp17a1 In Complex With Abira 1e-07
2hi4_A495 Crystal Structure Of Human Microsomal P450 1a2 In C 9e-07
1pq2_A476 Crystal Structure Of Human Drug Metabolizing Cytoch 2e-06
4gqs_A477 Structure Of Human Microsomal Cytochrome P450 (cyp) 1e-05
1og2_A475 Structure Of Human Cytochrome P450 Cyp2c9 Length = 1e-05
1r9o_A477 Crystal Structure Of P4502c9 With Flurbiprofen Boun 9e-05
3dam_A473 Crystal Structure Of Allene Oxide Synthase Length = 1e-04
1u13_A455 Crystal Structure Analysis Of The C37lC151TC442A-Tr 2e-04
2w0a_A455 Cyp51 Of M. Tuberculosis Bound To An Inhibitor N-[( 2e-04
1x8v_A455 Estriol-Bound And Ligand-Free Structures Of Sterol 2e-04
1ea1_A455 Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) 2e-04
3dax_A491 Crystal Structure Of Human Cyp7a1 Length = 491 4e-04
3sn5_A491 Crystal Structure Of Human Cyp7a1 In Complex With C 4e-04
1dt6_A473 Structure Of Mammalian Cytochrome P450 2c5 Length = 7e-04
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane Monoxygenase 139-3 Length = 455 Back     alignment and structure 
Iteration: 1

 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 169/379 (44%), Gaps = 68/379 (17%)
Query: 111 KDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSD 168
           +D  GDG+FT     + W++   I    FS + ++ +  A     A +L Q   E  N+D
Sbjct: 79  RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNAD 136
Query: 169 KILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVDI 225
           + +++ +   + TLD+I           +CG N    RF+S + D      +++ R +D 
Sbjct: 137 EYIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFIISMIRALDE 183
Query: 226 FWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKED 277
                +  N    A      + ++ I+V++  V KII  RK + +  D           D
Sbjct: 184 VMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD-----------D 232
Query: 278 ILSRFLQVTDPKYLRDI--------ILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQ 329
           +L++ L   DP+    +        I+ F+IAG +TT+  LS+ +Y L K+P V +K+ +
Sbjct: 233 LLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAE 292
Query: 330 EVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLP 389
           E               V    S + ++++ Y+   + E LRL+P  P  +     D  L 
Sbjct: 293 EATRVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 390 DGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE-SPF--------- 439
             + + KGD V      + R K IWGDD EEF+PER+ + + I Q    PF         
Sbjct: 343 GEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 440 -KFTAFQVSTVSRLLIKQF 457
            +F   + + V  +++K F
Sbjct: 403 QQFALHEATLVLGMMLKHF 421
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of P450bm-3 With N-Palmitoylglycine Length = 473 Back     alignment and structure
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3 Length = 487 Back     alignment and structure
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid Length = 458 Back     alignment and structure
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450 Bm3 Length = 482 Back     alignment and structure
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The Cytochrome P450(Bm-3) Length = 458 Back     alignment and structure
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of P450bm- 3 With N-Palmitoylglycine Length = 473 Back     alignment and structure
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine Inhibitor Bound To The Heme Domain Of Cytochrome P450-Bm3 Length = 470 Back     alignment and structure
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome P450- Bm3 Length = 470 Back     alignment and structure
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3 Length = 471 Back     alignment and structure
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain Of Cytochrome P450bm-3 Length = 455 Back     alignment and structure
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A Prototype For Microsomal P450's Length = 471 Back     alignment and structure
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450 Bm3 Length = 482 Back     alignment and structure
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of P450bm-3 Length = 473 Back     alignment and structure
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex With Cholesterol-3-Sulphate Length = 456 Back     alignment and structure
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450 Length = 471 Back     alignment and structure
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational Rearrangement Seen Upon Substrate-Binding In Wild-Type Enzyme Length = 471 Back     alignment and structure
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso Length = 455 Back     alignment and structure
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand Length = 471 Back     alignment and structure
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand Length = 472 Back     alignment and structure
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin Length = 471 Back     alignment and structure
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine Length = 470 Back     alignment and structure
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine Length = 472 Back     alignment and structure
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand Length = 471 Back     alignment and structure
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3 Length = 461 Back     alignment and structure
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain, A Ruthenium Modified P450 Bm3 Mutant Length = 470 Back     alignment and structure
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1) Length = 472 Back     alignment and structure
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin Length = 469 Back     alignment and structure
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome P4503a4-Bromoergocryptine Complex Length = 487 Back     alignment and structure
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4 Length = 485 Back     alignment and structure
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4 Length = 486 Back     alignment and structure
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome P450 In Complex With Androstenedione Length = 503 Back     alignment and structure
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From Streptomyces Coelicolor Length = 467 Back     alignment and structure
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In Complex With Deoxycorticosterone Length = 483 Back     alignment and structure
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3 Length = 479 Back     alignment and structure
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2 Length = 481 Back     alignment and structure
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In Complex With Chaps Length = 482 Back     alignment and structure
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase (P450c21) Length = 496 Back     alignment and structure
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With Coumarin Bound Length = 476 Back     alignment and structure
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound 4-(4- Chlorophenyl)imidazole Length = 476 Back     alignment and structure
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 Length = 476 Back     alignment and structure
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With 4-(4-Chlorophenyl) Imidazole Length = 476 Back     alignment and structure
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4- Cholorophenyl)imidazole Length = 478 Back     alignment and structure
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX With Phenacetin Length = 476 Back     alignment and structure
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase (C Complex With Ketoconazole Length = 461 Back     alignment and structure
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With Anti- Platelet Drug Clopidogrel Length = 479 Back     alignment and structure
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q Length = 476 Back     alignment and structure
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4- Methylpyrazole Length = 476 Back     alignment and structure
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q Length = 476 Back     alignment and structure
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1 Length = 444 Back     alignment and structure
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V Length = 476 Back     alignment and structure
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex Length = 479 Back     alignment and structure
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With Cholesterol Length = 487 Back     alignment and structure
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22- Dihydroxycholesterol Length = 471 Back     alignment and structure
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6 Length = 479 Back     alignment and structure
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With Alpha-naphthoflavone Length = 491 Back     alignment and structure
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant In Complex With The Inhibitor 4-(4-Chlorophenyl)imidazole Length = 476 Back     alignment and structure
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole Bound In Two Alternate Conformations Length = 476 Back     alignment and structure
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex With 22- Hydroxy-Cholesterol Length = 486 Back     alignment and structure
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha- Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1) Length = 507 Back     alignment and structure
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone Length = 494 Back     alignment and structure
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex With Alpha-Naphthoflavone Length = 495 Back     alignment and structure
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome P450 2c8 Length = 476 Back     alignment and structure
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19 Length = 477 Back     alignment and structure
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9 Length = 475 Back     alignment and structure
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound Length = 477 Back     alignment and structure
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase Length = 473 Back     alignment and structure
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple Mutant Of Cyp51 From Mycobacterium Tuberculosis Length = 455 Back     alignment and structure
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl] Cyclohexanecarboxamide Length = 455 Back     alignment and structure
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol 14alpha- Demethylase (Cyp51) Length = 455 Back     alignment and structure
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From Mycobacterium Tuberculosis In Complex With Fluconazole Length = 455 Back     alignment and structure
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1 Length = 491 Back     alignment and structure
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With Cholest-4-En-3-One Length = 491 Back     alignment and structure
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5 Length = 473 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query466
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 7e-84
2ij2_A470 Cytochrome P450 BM3; monoxygenase, heme binding pr 1e-80
3mdm_A456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 5e-77
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 7e-76
3n9y_A487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 3e-75
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 9e-73
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 3e-72
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 2e-67
3dax_A491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 1e-65
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 3e-64
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 6e-62
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 3e-59
3b6h_A498 Prostacyclin synthase; enzyme-inhibitor complex, C 3e-55
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 2e-53
3b98_A475 Prostaglandin I2 synthase; prostacyclin synthase, 6e-47
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 5e-46
3dsk_A495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 6e-43
3nxu_A485 Cytochrome P450 3A4; alpha beta protein, cytochrom 5e-41
3dan_A473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 6e-35
3qz1_A496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 2e-29
3pm0_A507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 3e-29
3swz_A494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 6e-29
3czh_A481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 2e-27
3tbg_A479 Cytochrome P450 2D6; monooxygenase, thioridazine, 9e-27
3e6i_A476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 1e-26
1po5_A476 Cytochrome P450 2B4; oxidoreductase, membrane prot 2e-26
2hi4_A495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 4e-26
1r9o_A477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 1e-25
2fdv_A476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 1e-25
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
3lxh_A421 Cytochrome P450; heme, iron, metal-binding, monoox 8e-05
3oft_A396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 1e-04
2zwu_A415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 1e-04
4dxy_A417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 2e-04
1odo_A408 Putative cytochrome P450 154A1; P450 monooxygenase 2e-04
3nc3_A441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 3e-04
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
 Score =  266 bits (681), Expect = 7e-84
 Identities = 80/441 (18%), Positives = 157/441 (35%), Gaps = 42/441 (9%)

Query: 12  ALAIALAILVVQIVTKTLTQKSGNKQKKYHPIGGTVF-NQLLNFNRLHHYMTDLAAKHG- 69
           A    L +  + ++       S      Y    G +  +    +  +          +G 
Sbjct: 24  ATMPVLLLTGLFLLVWNYEGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGE 83

Query: 70  TYRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSY-NYSILKDLLGDGIFTVDGEKWRE 128
             R+       +  S  +++ +++K N  +   GS      +       IF  + E W+ 
Sbjct: 84  FMRVWISGEETLIISKSSSMFHIMKHNHYSSRFGSKLGLQCIGMHEKGIIFNNNPELWKT 143

Query: 129 QRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKV 188
            R       S   L    +    ++       L E  N    +D+  L  +  LD+   +
Sbjct: 144 TRPFFMKALSGPGLVRMVTV-CAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDTSNTL 202

Query: 189 AFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVI 248
              + LD     +    +    FD  +   L    DIF+KI  L       + ++ ++ +
Sbjct: 203 FLRIPLDE----SAIVVKIQGYFD--AWQALLIKPDIFFKISWLYK-----KYEKSVKDL 251

Query: 249 DTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYL-----RDIILNFVIAGK 303
              +  +I +K         E    +  D  +  +       L        IL  +IA  
Sbjct: 252 KDAIEVLIAEK---RRRISTEEKLEECMDFATELILAEKRGDLTRENVNQCILEMLIAAP 308

Query: 304 DTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHA 363
           DT + +L + ++++ KHP V+E I++E++   G +D          I  + ++K+  +  
Sbjct: 309 DTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD----------IKIDDIQKLKVMEN 358

Query: 364 AITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKP 423
            I E++R  P V +  +    DD + DG+ V+KG  +      M R++F +     EF  
Sbjct: 359 FIYESMRYQPVVDLVMRKALEDDVI-DGYPVKKGTNIILNIGRMHRLEF-F-PKPNEFTL 415

Query: 424 ERWLDENGIFQKESPFKFTAF 444
           E +              F  F
Sbjct: 416 ENFAKNV------PYRYFQPF 430
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Length = 389 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Length = 495 Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Length = 485 Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Length = 473 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} PDB: 3lxi_A* Length = 421 Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Length = 396 Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Length = 415 Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Length = 417 Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Length = 408 Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Length = 441 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query466
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 100.0
3nxu_A485 Cytochrome P450 3A4; alpha beta protein, cytochrom 100.0
3ld6_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3pm0_A507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 100.0
2fdv_A476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 100.0
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 100.0
3tbg_A479 Cytochrome P450 2D6; monooxygenase, thioridazine, 100.0
2hi4_A495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 100.0
3e6i_A476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 100.0
3swz_A494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 100.0
3czh_A481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 100.0
1po5_A476 Cytochrome P450 2B4; oxidoreductase, membrane prot 100.0
3n9y_A487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 100.0
1r9o_A477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 100.0
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 100.0
3qz1_A496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 100.0
2ij2_A470 Cytochrome P450 BM3; monoxygenase, heme binding pr 100.0
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 100.0
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 100.0
3mdm_A456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 100.0
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 100.0
3dax_A491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 100.0
3v8d_A491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 100.0
3b6h_A498 Prostacyclin synthase; enzyme-inhibitor complex, C 100.0
3b98_A475 Prostaglandin I2 synthase; prostacyclin synthase, 100.0
2cd8_A436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 100.0
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 100.0
1jfb_A404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 100.0
2jjn_A411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 100.0
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 100.0
1ued_A406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 100.0
1cpt_A428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 100.0
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 100.0
3dsk_A495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 100.0
2zbx_A412 Cytochrome P450-SU1; beta prism, heme, iron, metal 100.0
3dan_A473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 100.0
2zwu_A415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 100.0
1s1f_A406 Putative cytochrome P450; cytochrome P450 oxidored 100.0
2xkr_A398 CYP142, putative cytochrome P450 142; oxidoreducta 100.0
3ejb_B404 Biotin biosynthesis cytochrome P450-like enzyme; p 100.0
1z8o_A404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 100.0
3buj_A397 CALO2; heme, iron, metal-binding, monooxygenase, o 100.0
3aba_A403 Cytochrome P450; oxidoreductase, heme, monooxygena 100.0
2z3t_A425 Cytochrome P450; monoxygenase, oxydoreductase, hem 100.0
4fb2_A398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 100.0
2y5n_A417 MYCG, P-450-like protein; oxidoreductase, mycinami 100.0
2wm5_A435 CYP124, putative cytochrome P450 124; metal-bindin 100.0
3tkt_A450 Cytochrome P450; aromatic hydrocarbon binding of P 100.0
3a4g_A411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 100.0
3tyw_A417 Putative cytochrome P450; P450 monooxygenase, oxid 100.0
2uuq_A414 CYP130, cytochrome P450 130; iron, heme, monooxyge 100.0
1gwi_A411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 100.0
2z36_A413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 100.0
2xbk_A404 PIMD protein; epoxidation, oxidoreductase; HET: HE 100.0
1q5d_A419 P450 epoxidase; cytochrome P450, epothilone, oxydo 100.0
1odo_A408 Putative cytochrome P450 154A1; P450 monooxygenase 100.0
3abb_A408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 100.0
3oft_A396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 100.0
3lxh_A421 Cytochrome P450; heme, iron, metal-binding, monoox 100.0
3nc3_A441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 100.0
2dkk_A411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 100.0
3ivy_A433 Cytochrome P450 CYP125; cholesterol, monooxygenase 100.0
1lfk_A398 OXYB, P450 monooxygenase; oxidative phenol couplin 100.0
3mgx_A415 Putative P450 monooxygenase; cytochrome P450 oxida 100.0
3r9b_A418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 100.0
3oo3_A384 OXY protein; cytochrome P450, monooxygenase, PCD-t 100.0
3rwl_A426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 100.0
1n40_A396 P450 MT2, cytochrome P450 121; heme binding, oxyge 100.0
2wiy_A394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 100.0
1io7_A368 Cytochrome P450 CYP119; thermophilic, cytochromo P 100.0
3b4x_A367 367AA long hypothetical cytochrome P450; HEM prote 100.0
2rfb_A343 Cytochrome P450; heme, iron, metal-binding, monoox 100.0
3p3o_A416 Cytochrome P450; monooxygenase, oxidoreductase; HE 100.0
4dnj_A412 Putative cytochrome P450; oxidoreductase; HET: HEM 100.0
4dxy_A417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 100.0
2yjn_B381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 100.0
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
Probab=100.00  E-value=2.5e-67  Score=505.01  Aligned_cols=409  Identities=19%  Similarity=0.297  Sum_probs=332.1

Q ss_pred             hhhcccCCCCCCCCCCcchhhhhhcc--hhhHHHHHHHHHhhcCc-eEEecCCcceEEecChhhHHHhhhcCCCCCCCch
Q 012330           28 TLTQKSGNKQKKYHPIGGTVFNQLLN--FNRLHHYMTDLAAKHGT-YRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGS  104 (466)
Q Consensus        28 ~~~~~~~~pgp~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yg~-~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~  104 (466)
                      ...+.+.+|||+++|++|+++.+...  .++++.++.+++++||+ |.+++++.++|+++||+++++|+.++ ..|.+++
T Consensus        19 ~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~   97 (482)
T 3k9v_A           19 ETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQRL   97 (482)
T ss_dssp             CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCCC
T ss_pred             ccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCCC
Confidence            44455899999999999999887543  35689999999999996 77788889999999999999999875 6777765


Q ss_pred             hhHH--HHHh--hccCceeecCCcchHHHHhhhhhcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceehHHhHH
Q 012330          105 YNYS--ILKD--LLGDGIFTVDGEKWREQRKISSHEF-STKVLRDFSSAAFRKNAAKLAQLLSEAAN-SDKILDIQDLFM  178 (466)
Q Consensus       105 ~~~~--~~~~--~~~~~l~~~~g~~w~~~R~~l~~~~-s~~~l~~~~~~~~~~~~~~l~~~l~~~~~-~~~~vdl~~~~~  178 (466)
                      ....  ....  ..+.+++..+|+.|+++|+.+.+.| +.+.++.+.+ .+++.++.+++.+.+.+. .++++|+.+++.
T Consensus        98 ~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~-~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~  176 (482)
T 3k9v_A           98 EIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDK-KINEVLADFLERMDELCDERGRIPDLYSELN  176 (482)
T ss_dssp             CCHHHHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGGHH-HHHHHHHHHHHHHHHHCCTTSCCTTHHHHHH
T ss_pred             CchHHHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCHHHHHH
Confidence            4321  1221  2357888899999999999999986 7888888884 888899999999987653 466899999999


Q ss_pred             HHHHHHHHHHHhcCCCcccCCCC-CCcchhHHHHHHHHHHhHhhhhhhhHHHHHHhccCchHHHHHHHHHHHHHHHHHHH
Q 012330          179 KSTLDSIFKVAFGVELDSVCGSN-EEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIR  257 (466)
Q Consensus       179 ~~~~~~i~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  257 (466)
                      .+++++++.++||.+++..++.. +....+.+.+.............+ +.+.++++...+++..+..+.+.+++.+.++
T Consensus       177 ~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~  255 (482)
T 3k9v_A          177 KWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTP-VELHKRLNTKVWQAHTLAWDTIFKSVKPCID  255 (482)
T ss_dssp             HHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGGSSSC-HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhh-HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999997654322 234556666666554433222111 2344555555566777777888888888888


Q ss_pred             HHHHhhhhhhhhhhccchhhHHHHhhccC--ChhHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcChHHHHHHHHHHHHHh
Q 012330          258 KKTDQMHDFQEEYTSMKKEDILSRFLQVT--DPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEAT  335 (466)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~--~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~  335 (466)
                      ++++.....       ...|++..+++..  +++++.+++..+++||+|||+++++|++++|++||++|+||++||++++
T Consensus       256 ~r~~~~~~~-------~~~d~l~~ll~~~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~  328 (482)
T 3k9v_A          256 NRLQRYSQQ-------PGADFLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVL  328 (482)
T ss_dssp             HHHHHTTTC-------TTSCHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred             HHHHHhccC-------CchHHHHHHHhccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence            887654321       2457777777654  8999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcchhhhhcCCCCHHHhhcChhHHHHHHhHhccCCCCCCCcccccccccCCCCeeecCCCEEEEeecccccCCCCcc
Q 012330          336 GAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWG  415 (466)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g  415 (466)
                      +..+         .++.+++++||||+|||+|+||++|++|...|++.+|.++ +||.|||||.|.++.+++|+||++| 
T Consensus       329 ~~~~---------~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-  397 (482)
T 3k9v_A          329 PDNQ---------TPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVL-GEYALPKGTVLTLNTQVLGSSEDNF-  397 (482)
T ss_dssp             CTTC---------CCCGGGGGGCHHHHHHHHHHHHHSCSCCEEEEECSSCEEE-TTEEECTTCEEEEECSGGGGCTTTC-
T ss_pred             CCCC---------CCCHHHHhhCHHHHHHHHHHhhcCCCCcCcccccCCceee-CCEEECCCCEEEEccccccCCCccC-
Confidence            8654         2589999999999999999999999999888888888777 9999999999999999999999999 


Q ss_pred             CCCCCcCCCcccCCCCCccccCCCccccCCCCcccccccccccccc
Q 012330          416 DDAEEFKPERWLDENGIFQKESPFKFTAFQVSTVSRLLIKQFSKCF  461 (466)
Q Consensus       416 ~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~~~~~~  461 (466)
                      +||++|+||||+++++.   ..+..|+|||+|+|.|+|.. ||..+
T Consensus       398 ~~p~~F~PeRfl~~~~~---~~~~~~~pFg~G~r~C~G~~-~A~~e  439 (482)
T 3k9v_A          398 EDSHKFRPERWLQKEKK---INPFAHLPFGIGKRMCIGRR-LAELQ  439 (482)
T ss_dssp             SSTTSCCGGGGTCTTSC---CCGGGCCTTCCSTTSCSCHH-HHHHH
T ss_pred             CCcCccCccccCCCCCC---CCCccccCCCCCCcCCccHH-HHHHH
Confidence            99999999999987542   34567999999999999876 66544
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 466
d1po5a_465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 8e-50
d1tqna_472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 2e-43
d3czha1463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 3e-43
d2ij2a1453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 2e-37
d1r9oa_467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 7e-35
d1izoa_411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 7e-20
d1n97a_385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 9e-16
d1odoa_401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 5e-13
d2ciba1445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 1e-10
d1cpta_428 a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas s 4e-07
d1ueda_403 a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatops 4e-06
d1gwia_403 a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyce 9e-06
d1jfba_399 a.104.1.1 (A:) Cytochrome P450-NOR, nitric reducta 0.002
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome p450 2b4
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  174 bits (441), Expect = 8e-50
 Identities = 73/412 (17%), Positives = 142/412 (34%), Gaps = 23/412 (5%)

Query: 39  KYHPIGGTVFNQLLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVYSSDPANVEYMLKTNF 97
              P+ G +    ++   L      L  K+G  + +    R  V       +   L    
Sbjct: 8   SPLPVLGNLL--QMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQA 65

Query: 98  DNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKL 157
           + +        +     G G+   +GE+WR  R+ S        +   S     +  A+ 
Sbjct: 66  EAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARC 125

Query: 158 AQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTR-FSSAFDDASA 216
                   +   +LD   LF   T + I  + FG   D            F  +F   S+
Sbjct: 126 LV-EELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISS 184

Query: 217 MTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKE 276
            +   +      +K     G+  ++ + ++ I+TF+ + + K    +             
Sbjct: 185 FSSQVFELFSGFLKHF--PGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYL 242

Query: 277 DILSRFLQVTDPKY----LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVK 332
             + +       ++    L   +L+   AG +TT+ TL +   ++ K+P V E++ +E++
Sbjct: 243 LRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIE 302

Query: 333 EATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGF 392
           +  G+             + +   KM Y  A I E  RL   +P       + DT   G+
Sbjct: 303 QVIGSHR---------PPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGY 353

Query: 393 SVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAF 444
            + K   V     +       + +    F P  +LD NG  ++     F  F
Sbjct: 354 VIPKNTEVFPVLSSALHDPRYF-ETPNTFNPGHFLDANGALKR--NEGFMPF 402
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Length = 428 Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Length = 403 Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 403 Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Length = 399 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query466
d2ij2a1453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 100.0
d1tqna_472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 100.0
d2ciba1445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 100.0
d1r9oa_467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 100.0
d3czha1463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 100.0
d1po5a_465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 100.0
d1izoa_411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 100.0
d1n97a_385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 100.0
d1gwia_403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 100.0
d1z8oa1402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 100.0
d1odoa_401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 100.0
d1jfba_399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 100.0
d1ueda_403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 100.0
d1q5da_401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 100.0
d1cpta_428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 100.0
d1re9a_404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 100.0
d1n40a_395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 100.0
d1s1fa_399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 100.0
d1io7a_366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 100.0
d1ue8a_367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 100.0
d1lfka_394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 100.0
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Cytochrome P450 bm-3
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=5.9e-64  Score=475.16  Aligned_cols=396  Identities=22%  Similarity=0.334  Sum_probs=318.0

Q ss_pred             cCCCCCCCCCCcchhhhhhcchhhHHHHHHHHHhhcCc-eEEecCCcceEEecChhhHHHhhhcCCCCCCCchhhHHHHH
Q 012330           33 SGNKQKKYHPIGGTVFNQLLNFNRLHHYMTDLAAKHGT-YRLLGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILK  111 (466)
Q Consensus        33 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~-~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~  111 (466)
                      +.+|||+++|++|+++.+  +..++++++.+++++||+ |.+++++.++++++||+++++++.++...+...... ..+.
T Consensus         1 r~iPGP~~~p~lG~l~~l--~~~~~~~~~~~~~~kyG~if~~~~~~~~~vvl~~~~~i~~v~~~~~~~~~~~~~~-~~~~   77 (453)
T d2ij2a1           1 KEMPQPKTFGELKNLPLL--NTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQAL-KFVR   77 (453)
T ss_dssp             CCCCCCCCCGGGTTGGGG--CSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTTTEEECCCHHH-HHHH
T ss_pred             CCCccCCCcchhhCHHHh--CCCCHHHHHHHHHHHhCCEEEEEeCCceEEEECCHHHHHHHHhcCCcccccccHh-HHHH
Confidence            578999999999998765  345689999999999996 788999999999999999999998765455554433 4566


Q ss_pred             hhccCceee--cCCcchHHHHhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceehHHhHHHHHHHHHHHHH
Q 012330          112 DLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVA  189 (466)
Q Consensus       112 ~~~~~~l~~--~~g~~w~~~R~~l~~~~s~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~  189 (466)
                      .+.|++++.  .+|+.|+++|+++.+.|+..+++.+.+ .+.+.++.+++.+.+. ..++.+|+.+++..+++++++.++
T Consensus        78 ~~~g~~~~~~~~~g~~wk~~Rk~l~~~fs~~~l~~~~~-~i~~~~~~li~~l~~~-~~~~~idl~~~~~~~~~~~i~~~~  155 (453)
T d2ij2a1          78 DFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHA-MMVDIAVQLVQKWERL-NADEHIEVPEDMTRLTLDTIGLCG  155 (453)
T ss_dssp             HHHTTSGGGSCTTSHHHHHHHHHHGGGGSTTTHHHHHH-HHHHHHHHHHHHHHTC-CTTCCEEHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCcEEecCCChHHHHHHHHHHHHHhhhhhhhhhhh-hHHHHHHHHHHHhhhc-CCCCccchHHHHHHHhhhcchhcc
Confidence            778888765  589999999999999999999999885 7888999999998753 457799999999999999999999


Q ss_pred             hcCCCcccCCCCCCcchhHHHHHHHHHHhHhhhhhhhHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 012330          190 FGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEE  269 (466)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  269 (466)
                      ||.+++....+  ....+...+...............+...  ......+++.+..+.+.+++.++++++.+..+     
T Consensus       156 fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-----  226 (453)
T d2ij2a1         156 FNYRFNSFYRD--QPHPFITSMVRALDEAMNKLQRANPDDP--AYDENKRQFQEDIKVMNDLVDKIIADRKASGE-----  226 (453)
T ss_dssp             HSCCCCGGGCS--SCCHHHHHHHHHHHHHHHTC---CTTSG--GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred             cccccchhhhc--cchHHHHhhhhccchhhhhhhhcccccc--cchhhHHHHHHHHHHHHHHHHHHHhhhccccc-----
Confidence            99988754322  1233333333332222221111111100  01123345566677777777777777665432     


Q ss_pred             hhccchhhHHHHhhccC--------ChhHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCcc
Q 012330          270 YTSMKKEDILSRFLQVT--------DPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDIS  341 (466)
Q Consensus       270 ~~~~~~~d~l~~ll~~~--------~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~  341 (466)
                          ...|+++.+++..        +++++.+++..+++||+|||+++++|++++|+.||++|+++++|++.+.+...  
T Consensus       227 ----~~~d~l~~ll~~~~~~~~~~ls~~ei~~~~~~~l~ag~~tta~~l~~~l~~L~~~p~~~~~~~~e~~~~~~~~~--  300 (453)
T d2ij2a1         227 ----QSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV--  300 (453)
T ss_dssp             ----CCSSHHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCSSS--
T ss_pred             ----cccchhhhhhhhcccccCcchhhhHHHhhhccccccccccchhhhhcchhhhhcccccchhhhhhhhhhhcccc--
Confidence                3568889888653        78899999999999999999999999999999999999999999999887653  


Q ss_pred             hhhhhcCCCCHHHhhcChhHHHHHHhHhccCCCCCCCcccccccccCCCCeeecCCCEEEEeecccccCCCCccCCCCCc
Q 012330          342 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEF  421 (466)
Q Consensus       342 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~g~~p~~F  421 (466)
                              .+.+++++||||+|||+|++|++|+++...|++..++++.+||.||||+.|.++.+.+|+||++||+||++|
T Consensus       301 --------~~~~~l~~~p~L~a~i~E~lR~~p~~~~~~r~~~~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~dp~~F  372 (453)
T d2ij2a1         301 --------PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF  372 (453)
T ss_dssp             --------CCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSC
T ss_pred             --------CChhhhhcCCcchhhhhhhhcccccccccccccccccccCCcceeecccccccchhhcccChhhcCCchhhc
Confidence                    489999999999999999999999999999999999999899999999999999999999999998899999


Q ss_pred             CCCcccCCCCCccccCCCccccCCCCcccccccccccccc
Q 012330          422 KPERWLDENGIFQKESPFKFTAFQVSTVSRLLIKQFSKCF  461 (466)
Q Consensus       422 ~P~Rfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~~~~~~  461 (466)
                      +||||++++.    ..+..|+|||+|+|.|+|.. ||...
T Consensus       373 ~PeRfl~~~~----~~~~~~~pFG~G~r~C~G~~-~A~~~  407 (453)
T d2ij2a1         373 RPERFENPSA----IPQHAFKPFGNGQRACIGQQ-FALHE  407 (453)
T ss_dssp             CGGGGSSGGG----SCTTSCCTTCCGGGSCTTHH-HHHHH
T ss_pred             CccccCCCCC----CCCCcccCCCCCCccChhHH-HHHHH
Confidence            9999998753    23567999999999999865 66544
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure