Citrus Sinensis ID: 012335

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460------
MAGDHQNSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTKGPEIRTGFLKDGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANAAENFINYGDLFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVALHRMHVASVLKILAVN
ccccccccccccEEEEcccccccHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHHHHccccEEEEEccccccEEEEccccccEEEEccccEEEEEEcccccccccEEEEEccccccccccccEEEEEccEEEEEEEEEEccccEEEEEEEEccEEcccccccccccccccccccHHcHHHHHHHcccccccEEEEccccccHHHHHHHHHHHHccccccEEEccccHHHHHcHHHHHHccccEEEEcccccccccccccHHHHHHHHHHHHHccccEEEEccHHHHHHcccccccccHHHHccccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHccccccEEEEEcccccccccccccccHHHHHHHHcccccEEEcccccccccccccHHHHHHHHHHHHHHccccccccEEEEEcccccccEEEEEEcc
cccccccccccEEEEEcccccccHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHHHHccccEEEEEcccccEEEccEcccEEEEEccccEEEEEEcccEcccccEEEEEccccccccccccEEEEEccEEEEEEEEEcccccEEEEEEcccEEcccccEEEccccccccccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHcHHHcccEEEEEEccHHHHHcHHHHHHHccEEEEcHHHHHHHccHHHHHHHHHHHHHHHHHHcccEEEcccccHHHHccccccHHHHHHHHHHHHHHccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHccccccEEEEEEEEEcccccccccccHHHHHHHHHHcccEEEEccccccccHHHcHHHHHHHHHHHHHHccccccccEEEEEEccccccEEEEEEEc
magdhqnspktkivctlgpasrSVEMAEKLLRAGMNVArfnfshgshayhQETLDNLRTAMNNTGILCAVMLdtkgpeirtgflkdgkpiqlvqgqeitistdyslkgdEKMISMSYKKLAedlrpgsvilcsdgtisLTVLDCAKelglvrcrcensavlgerknvnlpgvivdlptltekdkedilnwgvpnkiDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVenlegvanfddvlaNSDAFMVArgdlgmeipIEKIFLAQKVMIHKaniqgkpvVTATQMLESmiksprptraeATDVANAAENFINYGDLFKKImetapvpmspleslASSAVRTANCIKAALILVLTRggttakmvskyrpsmpilsvivpeiktdsivwscsdeaparHSLIFRALVpvlssgsarasdeesTEETIEFALQHAKAkglcrpgdsvVALHRMHVASVLKILAVN
magdhqnspktkivctlgpasRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTKGPEIRtgflkdgkpiqlvqgqeitistdyslkgdEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENsavlgerknvnlpgvivdlptltekdkedilnwgvpnkIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANAAENFINYGDLFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGGTTAkmvskyrpsmpiLSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVALHRMHVASVLKILAVN
MAGDHQNSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTKGPEIRTGFLKDGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANAAENFINYGDLFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVALHRMHVASVLKILAVN
************IVCTLG******EMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTKGPEIRTGFLKDGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQ******************VANAAENFINYGDLFKKIMETAPVP*****SLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVL*****************EFALQHAKAKGLCRPGDSVVALHRMHVASVLKILA**
************IVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTKGPEIRTGFLKDGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANAAENFINYGDLFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVALHRMHVASVLKILAV*
**********TKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTKGPEIRTGFLKDGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIK*********TDVANAAENFINYGDLFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVL*****************EFALQHAKAKGLCRPGDSVVALHRMHVASVLKILAVN
*****QNSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTKGPEIRTGFLKDGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANAAENFINYGDLFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVALHRMHVASVLKILAVN
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MAGDHQNSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTKGPEIRTGFLKDGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANAAENFINYGDLFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVALHRMHVASVLKILAVN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query466 2.2.26 [Sep-21-2011]
Q42954508 Pyruvate kinase, cytosoli N/A no 0.980 0.899 0.787 0.0
O65595497 Probable pyruvate kinase, no no 0.987 0.925 0.734 0.0
Q42806511 Pyruvate kinase, cytosoli no no 0.980 0.894 0.714 0.0
P22200510 Pyruvate kinase, cytosoli N/A no 0.980 0.896 0.689 0.0
O44006531 Pyruvate kinase OS=Eimeri N/A no 0.929 0.815 0.432 1e-105
Q54RF5507 Pyruvate kinase OS=Dictyo yes no 0.901 0.828 0.444 1e-104
P14618531 Pyruvate kinase isozymes yes no 0.912 0.800 0.421 7e-96
Q92122527 Pyruvate kinase muscle is N/A no 0.907 0.802 0.411 8e-95
Q12669526 Pyruvate kinase OS=Asperg yes no 0.927 0.821 0.402 2e-94
P11980531 Pyruvate kinase isozymes yes no 0.905 0.794 0.420 1e-93
>sp|Q42954|KPYC_TOBAC Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function desciption
 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/490 (78%), Positives = 416/490 (84%), Gaps = 33/490 (6%)

Query: 9   PKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILC 68
           PKTKIVCTLGPASRSV M EKLLRAGMNVARFNFSHGSH YHQET+DNLR AM +TGILC
Sbjct: 18  PKTKIVCTLGPASRSVPMIEKLLRAGMNVARFNFSHGSHDYHQETIDNLRQAMESTGILC 77

Query: 69  AVMLDTKGPEIRTGFLKDGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGS 128
           AVMLDTKGPEIRTGFLKD KP+QL QGQEITISTDYS+KGDE MI MSYKKLAED++P S
Sbjct: 78  AVMLDTKGPEIRTGFLKDAKPVQLKQGQEITISTDYSIKGDESMICMSYKKLAEDVKPQS 137

Query: 129 VILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVIVDLPTLTEKDKEDIL 188
           VILC+DG I+ TVL C KE GL RCRCEN+AVLGERKNVNLPGVIVDLPTLT+KDK+DIL
Sbjct: 138 VILCADGQITFTVLSCDKENGLDRCRCENTAVLGERKNVNLPGVIVDLPTLTDKDKDDIL 197

Query: 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDA 248
           NWGVPN IDMIALSFVRKGSDLVEVR LL  HAKNILLMSKVEN EGVANFDD+L NSDA
Sbjct: 198 NWGVPNHIDMIALSFVRKGSDLVEVRKLLGEHAKNILLMSKVENQEGVANFDDILLNSDA 257

Query: 249 FMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVA 308
           FMVARGDLGMEIPIEKIFLAQKVMI+K NIQGKPVVTATQMLESMIKSPRPTRAEATDVA
Sbjct: 258 FMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVA 317

Query: 309 NA---------------------------------AENFINYGDLFKKIMETAPVPMSPL 335
           NA                                 AE+ I+Y D+FK+IM  APVPMSPL
Sbjct: 318 NAVLDGTDCVMLSGETAAGAYPDLAVGTMAKICIEAESTIDYPDVFKRIMSNAPVPMSPL 377

Query: 336 ESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMPILSVIVPEIKTDSIVWSCSD 395
           ESLASSAVRTAN  KAALILVLTRGG+TAK+V+KYRP MPILSV+VPEIKTDS  W+CSD
Sbjct: 378 ESLASSAVRTANSAKAALILVLTRGGSTAKLVAKYRPGMPILSVVVPEIKTDSFDWTCSD 437

Query: 396 EAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVALHRMH 455
           E+PARHSLIFR LVPVL +GSARAS EESTEE ++FALQHAK KGLC+ GDSVVALHR+ 
Sbjct: 438 ESPARHSLIFRGLVPVLHAGSARASHEESTEEALDFALQHAKTKGLCKQGDSVVALHRVG 497

Query: 456 VASVLKILAV 465
            ASV+KI+ V
Sbjct: 498 TASVIKIVTV 507

Nicotiana tabacum (taxid: 4097)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 4EC: 0
>sp|O65595|KPYC_ARATH Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=3 SV=1 Back     alignment and function description
>sp|Q42806|KPYC_SOYBN Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1 Back     alignment and function description
>sp|P22200|KPYC_SOLTU Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1 Back     alignment and function description
>sp|O44006|KPYK_EIMTE Pyruvate kinase OS=Eimeria tenella GN=PYK PE=2 SV=1 Back     alignment and function description
>sp|Q54RF5|KPYK_DICDI Pyruvate kinase OS=Dictyostelium discoideum GN=pyk PE=1 SV=1 Back     alignment and function description
>sp|P14618|KPYM_HUMAN Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=PKM PE=1 SV=4 Back     alignment and function description
>sp|Q92122|KPYK_XENLA Pyruvate kinase muscle isozyme OS=Xenopus laevis GN=pkm PE=2 SV=1 Back     alignment and function description
>sp|Q12669|KPYK_ASPNG Pyruvate kinase OS=Aspergillus niger GN=pkiA PE=3 SV=1 Back     alignment and function description
>sp|P11980|KPYM_RAT Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicus GN=Pkm PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query466
449463834500 PREDICTED: pyruvate kinase, cytosolic is 0.987 0.92 0.803 0.0
147821580500 hypothetical protein VITISV_031893 [Viti 0.995 0.928 0.788 0.0
359481838500 PREDICTED: pyruvate kinase, cytosolic is 0.995 0.928 0.786 0.0
224123824500 predicted protein [Populus trichocarpa] 1.0 0.932 0.785 0.0
357510595500 Pyruvate kinase [Medicago truncatula] gi 0.989 0.922 0.789 0.0
217074474500 unknown [Medicago truncatula] gi|3885165 0.989 0.922 0.787 0.0
255564804509 pyruvate kinase, putative [Ricinus commu 0.987 0.903 0.784 0.0
224145953499 predicted protein [Populus trichocarpa] 1.0 0.933 0.775 0.0
224056925493 predicted protein [Populus trichocarpa] 0.980 0.926 0.785 0.0
2497543508 RecName: Full=Pyruvate kinase, cytosolic 0.980 0.899 0.787 0.0
>gi|449463834|ref|XP_004149636.1| PREDICTED: pyruvate kinase, cytosolic isozyme-like [Cucumis sativus] gi|449519038|ref|XP_004166542.1| PREDICTED: pyruvate kinase, cytosolic isozyme-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/493 (80%), Positives = 424/493 (86%), Gaps = 33/493 (6%)

Query: 6   QNSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTG 65
           +  PKTKIVCTLGPASRSV M EKLL+AGMNVARFNFSHGSHAYHQETLDNLR  M NTG
Sbjct: 7   EKKPKTKIVCTLGPASRSVPMIEKLLKAGMNVARFNFSHGSHAYHQETLDNLRAGMENTG 66

Query: 66  ILCAVMLDTKGPEIRTGFLKDGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLR 125
           ILCAVMLDTKGPEIRTGFLKDGKPIQL QGQEITISTDYSLKGDE MI MSYKKLAED++
Sbjct: 67  ILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYSLKGDENMICMSYKKLAEDVK 126

Query: 126 PGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVIVDLPTLTEKDKE 185
           PGSVILCSDGTIS +VL C K+LGLV+CRCENSAVLGERKNVNLPGVIVDLPTLTEKDKE
Sbjct: 127 PGSVILCSDGTISFSVLSCDKKLGLVQCRCENSAVLGERKNVNLPGVIVDLPTLTEKDKE 186

Query: 186 DILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN 245
           DIL WGVPNKIDMIALSFVRKGSDLVEVR LL  HAK+ILLMSKVEN EGVANFDD+LAN
Sbjct: 187 DILEWGVPNKIDMIALSFVRKGSDLVEVRKLLGKHAKSILLMSKVENQEGVANFDDILAN 246

Query: 246 SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEAT 305
           SDAFMVARGDLGMEIPIEKIFLAQKVMI+K NIQGKPVVTATQMLESMIKSPRPTRAEAT
Sbjct: 247 SDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEAT 306

Query: 306 DVANA---------------------------------AENFINYGDLFKKIMETAPVPM 332
           DVANA                                 AE+ ++YGD+FK+IME +PVPM
Sbjct: 307 DVANAVLDGTDCVMLSGETAAGAYPELAVRTMAKICVEAESTLDYGDVFKRIMEHSPVPM 366

Query: 333 SPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMPILSVIVPEIKTDSIVWS 392
           SPLESLASSAVRTAN  KAALILVLTRGG+TAK+V+KYRP  PILSV+VPEIKTDS  WS
Sbjct: 367 SPLESLASSAVRTANSAKAALILVLTRGGSTAKLVAKYRPGTPILSVVVPEIKTDSFDWS 426

Query: 393 CSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVALH 452
           CSDEAPARHSLIFR LVPVLS+ SAR+S  E+TEE IEFA+QHAK+KGLC+ GDSVVALH
Sbjct: 427 CSDEAPARHSLIFRGLVPVLSTASARSSHAETTEEAIEFAIQHAKSKGLCKNGDSVVALH 486

Query: 453 RMHVASVLKILAV 465
           R+  ASV+KIL V
Sbjct: 487 RVGTASVIKILTV 499

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147821580|emb|CAN70030.1| hypothetical protein VITISV_031893 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359481838|ref|XP_002282379.2| PREDICTED: pyruvate kinase, cytosolic isozyme-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224123824|ref|XP_002319173.1| predicted protein [Populus trichocarpa] gi|222857549|gb|EEE95096.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357510595|ref|XP_003625586.1| Pyruvate kinase [Medicago truncatula] gi|355500601|gb|AES81804.1| Pyruvate kinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|217074474|gb|ACJ85597.1| unknown [Medicago truncatula] gi|388516555|gb|AFK46339.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|255564804|ref|XP_002523396.1| pyruvate kinase, putative [Ricinus communis] gi|223537346|gb|EEF38975.1| pyruvate kinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224145953|ref|XP_002325825.1| predicted protein [Populus trichocarpa] gi|222862700|gb|EEF00207.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224056925|ref|XP_002299092.1| predicted protein [Populus trichocarpa] gi|222846350|gb|EEE83897.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|2497543|sp|Q42954.1|KPYC_TOBAC RecName: Full=Pyruvate kinase, cytosolic isozyme; Short=PK gi|444023|emb|CAA82628.1| pyruvate kinase [Nicotiana tabacum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query466
TAIR|locus:2161068498 AT5G56350 [Arabidopsis thalian 0.654 0.612 0.872 5.4e-195
TAIR|locus:2131453497 AT4G26390 [Arabidopsis thalian 0.654 0.613 0.849 8.3e-188
TAIR|locus:2160599510 AT5G63680 [Arabidopsis thalian 0.650 0.594 0.808 4.9e-181
TAIR|locus:2159577510 AT5G08570 [Arabidopsis thalian 0.648 0.592 0.814 3.4e-180
TAIR|locus:2095953510 AT3G04050 [Arabidopsis thalian 0.665 0.607 0.821 1e-178
TAIR|locus:2092085497 AT3G25960 [Arabidopsis thalian 0.645 0.605 0.843 3.4e-169
TAIR|locus:2078956492 AT3G55810 [Arabidopsis thalian 0.555 0.526 0.826 6e-160
TAIR|locus:2078966510 AT3G55650 [Arabidopsis thalian 0.903 0.825 0.637 4.4e-132
UNIPROTKB|P14618531 PKM "Pyruvate kinase isozymes 0.688 0.604 0.505 1e-90
MGI|MGI:97591531 Pkm "pyruvate kinase, muscle" 0.688 0.604 0.502 9e-90
TAIR|locus:2161068 AT5G56350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1355 (482.0 bits), Expect = 5.4e-195, Sum P(2) = 5.4e-195
 Identities = 266/305 (87%), Positives = 277/305 (90%)

Query:     6 QNSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTG 65
             +  PKTKIVCTLGPASRSV M EKLLRAGMNVARFNFSHGSH YHQETLDNL  AM NTG
Sbjct:     5 EQRPKTKIVCTLGPASRSVPMVEKLLRAGMNVARFNFSHGSHEYHQETLDNLHQAMLNTG 64

Query:    66 ILCAVMLDTKGPEIRTGFLKDGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLR 125
             ILCAVMLDTKGPEIRTGFLKDGKPIQL QGQEITISTDY LKGDE  I MSYKKLA D+ 
Sbjct:    65 ILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYDLKGDENTICMSYKKLAVDVN 124

Query:   126 PGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVIVDLPTLTEKDKE 185
             PG VILC+DGTISL VL C KE G VRCRCENSA+LGERKNVNLPGV+VDLPTLTEKDKE
Sbjct:   125 PGMVILCADGTISLLVLSCDKENGTVRCRCENSAMLGERKNVNLPGVVVDLPTLTEKDKE 184

Query:   186 DILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLAN 245
             DI+ WGVPN+IDMIALSFVRKGSDLV+VR LL  HAKNILLMSKVEN EGVANFDD+L N
Sbjct:   185 DIMQWGVPNQIDMIALSFVRKGSDLVQVRKLLGKHAKNILLMSKVENQEGVANFDDILVN 244

Query:   246 SDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEAT 305
             SDAFM+ARGDLGMEIPIEKIFLAQKVMI+K NIQGKPVVTATQMLESMIKSPRPTRAEAT
Sbjct:   245 SDAFMIARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSPRPTRAEAT 304

Query:   306 DVANA 310
             DVANA
Sbjct:   305 DVANA 309
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0003824 "catalytic activity" evidence=IEA
GO:0004743 "pyruvate kinase activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0006096 "glycolysis" evidence=IEA;ISS
GO:0030955 "potassium ion binding" evidence=IEA
GO:0005829 "cytosol" evidence=IDA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0006865 "amino acid transport" evidence=RCA
GO:0007010 "cytoskeleton organization" evidence=RCA
GO:0010498 "proteasomal protein catabolic process" evidence=RCA
TAIR|locus:2131453 AT4G26390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160599 AT5G63680 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2159577 AT5G08570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095953 AT3G04050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092085 AT3G25960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078956 AT3G55810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078966 AT3G55650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P14618 PKM "Pyruvate kinase isozymes M1/M2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:97591 Pkm "pyruvate kinase, muscle" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P30614KPYK_YARLI2, ., 7, ., 1, ., 4, 00.38600.92480.8368yesno
Q42954KPYC_TOBAC2, ., 7, ., 1, ., 4, 00.78770.98060.8996N/Ano
P14618KPYM_HUMAN2, ., 7, ., 1, ., 4, 00.42140.91200.8003yesno
Q10208KPYK_SCHPO2, ., 7, ., 1, ., 4, 00.38540.91840.8408yesno
Q42806KPYC_SOYBN2, ., 7, ., 1, ., 4, 00.71420.98060.8943nono
Q54RF5KPYK_DICDI2, ., 7, ., 1, ., 4, 00.44440.90120.8284yesno
P22360KPYK_EMENI2, ., 7, ., 1, ., 4, 00.39630.92700.8212yesno
P22200KPYC_SOLTU2, ., 7, ., 1, ., 4, 00.68970.98060.8960N/Ano
P77983KPYK1_SALTY2, ., 7, ., 1, ., 4, 00.42120.89690.8893yesno
O65595KPYC_ARATH2, ., 7, ., 1, ., 4, 00.73420.98710.9255nono
Q12669KPYK_ASPNG2, ., 7, ., 1, ., 4, 00.40240.92700.8212yesno
Q6BS75KPYK_DEBHA2, ., 7, ., 1, ., 4, 00.36740.91840.8492yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.400.979
3rd Layer2.7.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_LG_XIII000262
pyruvate kinase (EC-2.7.1.40) (500 aa)
(Populus trichocarpa)
Predicted Functional Partners:
eugene3.00030830
lactate dehydrogenase (EC-1.1.1.27) (351 aa)
     •• 0.942
estExt_fgenesh4_pm.C_LG_XII0191
enolase (EC-4.2.1.11) (431 aa)
•    •• 0.922
estExt_fgenesh4_pm.C_280132
RecName- Full=Enolase; EC=4.2.1.11; (445 aa)
•    •• 0.922
eugene3.00151093
RecName- Full=Enolase; EC=4.2.1.11; (445 aa)
     •• 0.921
estExt_Genewise1_v1.C_LG_VII3984
phosphoenolpyruvate carboxykinase (ATP) (EC-4.1.1.49) (664 aa)
     •• 0.912
estExt_fgenesh4_pg.C_LG_II0983
phosphoenolpyruvate carboxykinase (ATP) (EC-4.1.1.49) (667 aa)
     •• 0.912
eugene3.00400106
RecName- Full=Nucleoside diphosphate kinase; EC=2.7.4.6; (149 aa)
     •• 0.909
gw1.VIII.102.1
hypothetical protein (223 aa)
     •• 0.908
gw1.V.2541.1
hypothetical protein (1081 aa)
     •• 0.908
estExt_fgenesh4_pg.C_LG_XII0928
adenylate kinase (EC-2.7.4.3) (246 aa)
     •• 0.908

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query466
PLN02461511 PLN02461, PLN02461, Probable pyruvate kinase 0.0
cd00288480 cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): La 0.0
PTZ00066513 PTZ00066, PTZ00066, pyruvate kinase; Provisional 1e-164
pfam00224348 pfam00224, PK, Pyruvate kinase, barrel domain 1e-158
PLN02765526 PLN02765, PLN02765, pyruvate kinase 1e-153
TIGR01064473 TIGR01064, pyruv_kin, pyruvate kinase 1e-149
COG0469477 COG0469, PykF, Pyruvate kinase [Carbohydrate trans 1e-147
PRK05826465 PRK05826, PRK05826, pyruvate kinase; Provisional 1e-144
PRK09206470 PRK09206, PRK09206, pyruvate kinase; Provisional 1e-138
PRK06354 590 PRK06354, PRK06354, pyruvate kinase; Provisional 1e-127
PTZ00300454 PTZ00300, PTZ00300, pyruvate kinase; Provisional 1e-105
PRK06247476 PRK06247, PRK06247, pyruvate kinase; Provisional 1e-100
PLN02623581 PLN02623, PLN02623, pyruvate kinase 1e-76
PRK06739352 PRK06739, PRK06739, pyruvate kinase; Validated 7e-69
PLN02762509 PLN02762, PLN02762, pyruvate kinase complex alpha 5e-65
PRK08187493 PRK08187, PRK08187, pyruvate kinase; Validated 9e-34
pfam02887117 pfam02887, PK_C, Pyruvate kinase, alpha/beta domai 2e-24
PRK14725608 PRK14725, PRK14725, pyruvate kinase; Provisional 3e-22
PRK14725608 PRK14725, PRK14725, pyruvate kinase; Provisional 1e-07
>gnl|CDD|215255 PLN02461, PLN02461, Probable pyruvate kinase Back     alignment and domain information 
 Score =  945 bits (2446), Expect = 0.0
 Identities = 375/499 (75%), Positives = 419/499 (83%), Gaps = 33/499 (6%)

Query: 1   MAGDHQNSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTA 60
           +  D    PKTKIVCTLGPASRSV M EKLLRAGMNVARFNFSHGSH YHQETLDNLR A
Sbjct: 13  LPADGLRRPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGSHEYHQETLDNLRQA 72

Query: 61  MNNTGILCAVMLDTKGPEIRTGFLKDGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKL 120
           M NTGILCAVMLDTKGPEIRTGFLKDGKP+QL QGQEITI+TDYS+KGDE MI+MSYKKL
Sbjct: 73  MANTGILCAVMLDTKGPEIRTGFLKDGKPVQLKQGQEITITTDYSIKGDENMIAMSYKKL 132

Query: 121 AEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVIVDLPTLT 180
           A D++PGSVILC+DGTI+LTVL C  E G VRCRCENSA+LGERKNVNLPGV+VDLPTLT
Sbjct: 133 AVDVKPGSVILCADGTITLTVLSCDVEAGTVRCRCENSAMLGERKNVNLPGVVVDLPTLT 192

Query: 181 EKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFD 240
           EKDKEDIL WGVPNKID IALSFVRKGSDLVEVR +L  HAK+ILL+SKVEN EG+ NFD
Sbjct: 193 EKDKEDILQWGVPNKIDFIALSFVRKGSDLVEVRKVLGEHAKSILLISKVENQEGLDNFD 252

Query: 241 DVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPT 300
           D+LA SDAFMVARGDLGMEIPIEKIFLAQK+MI+K N+ GKPVVTATQMLESMIKSPRPT
Sbjct: 253 DILAESDAFMVARGDLGMEIPIEKIFLAQKMMIYKCNLAGKPVVTATQMLESMIKSPRPT 312

Query: 301 RAEATDVANA---------------------------------AENFINYGDLFKKIMET 327
           RAEATDVANA                                 AE  ++YG LFK+IM +
Sbjct: 313 RAEATDVANAVLDGTDCVMLSGETAAGAYPELAVKTMARICREAEASLDYGALFKEIMRS 372

Query: 328 APVPMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMPILSVIVPEIKTD 387
           AP+PMSPLESLASSAVRTAN +KA+LI+VLTRGGTTA++V+KYRP++PILSV+VPEI TD
Sbjct: 373 APLPMSPLESLASSAVRTANKVKASLIVVLTRGGTTARLVAKYRPAVPILSVVVPEITTD 432

Query: 388 SIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDS 447
           S  WSCSDEAPARHSLI+R L+PVL+ GSA+A+D ESTEE +E A++HAK KGLC+PGDS
Sbjct: 433 SFDWSCSDEAPARHSLIYRGLIPVLAEGSAKATDSESTEEILEAAIEHAKKKGLCKPGDS 492

Query: 448 VVALHRMHVASVLKILAVN 466
           VVALHR+  ASV+KIL V 
Sbjct: 493 VVALHRIGGASVIKILTVK 511

Length = 511
>gnl|CDD|238178 cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors Back     alignment and domain information
>gnl|CDD|173361 PTZ00066, PTZ00066, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|215802 pfam00224, PK, Pyruvate kinase, barrel domain Back     alignment and domain information
>gnl|CDD|215409 PLN02765, PLN02765, pyruvate kinase Back     alignment and domain information
>gnl|CDD|233257 TIGR01064, pyruv_kin, pyruvate kinase Back     alignment and domain information
>gnl|CDD|223545 COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|235619 PRK05826, PRK05826, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|181699 PRK09206, PRK09206, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|235784 PRK06354, PRK06354, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|140321 PTZ00300, PTZ00300, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|180487 PRK06247, PRK06247, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|215334 PLN02623, PLN02623, pyruvate kinase Back     alignment and domain information
>gnl|CDD|180676 PRK06739, PRK06739, pyruvate kinase; Validated Back     alignment and domain information
>gnl|CDD|215407 PLN02762, PLN02762, pyruvate kinase complex alpha subunit Back     alignment and domain information
>gnl|CDD|236178 PRK08187, PRK08187, pyruvate kinase; Validated Back     alignment and domain information
>gnl|CDD|217269 pfam02887, PK_C, Pyruvate kinase, alpha/beta domain Back     alignment and domain information
>gnl|CDD|237804 PRK14725, PRK14725, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|237804 PRK14725, PRK14725, pyruvate kinase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 466
PLN02461511 Probable pyruvate kinase 100.0
PLN02762509 pyruvate kinase complex alpha subunit 100.0
PTZ00066513 pyruvate kinase; Provisional 100.0
PLN02765526 pyruvate kinase 100.0
PRK09206470 pyruvate kinase; Provisional 100.0
COG0469477 PykF Pyruvate kinase [Carbohydrate transport and m 100.0
PRK06247476 pyruvate kinase; Provisional 100.0
PRK06354 590 pyruvate kinase; Provisional 100.0
cd00288480 Pyruvate_Kinase Pyruvate kinase (PK): Large allost 100.0
PRK05826465 pyruvate kinase; Provisional 100.0
PLN02623581 pyruvate kinase 100.0
PTZ00300454 pyruvate kinase; Provisional 100.0
KOG2323501 consensus Pyruvate kinase [Carbohydrate transport 100.0
TIGR01064473 pyruv_kin pyruvate kinase. This enzyme is a homote 100.0
PRK06739352 pyruvate kinase; Validated 100.0
PF00224348 PK: Pyruvate kinase, barrel domain; InterPro: IPR0 100.0
PRK14725608 pyruvate kinase; Provisional 100.0
PRK08187493 pyruvate kinase; Validated 100.0
PF02887117 PK_C: Pyruvate kinase, alpha/beta domain; InterPro 99.95
PRK10558256 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Pro 99.48
TIGR03239249 GarL 2-dehydro-3-deoxyglucarate aldolase. In E. co 99.48
PRK10128267 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional 99.38
PF03328221 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family 99.32
TIGR02311249 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola 99.28
COG3836255 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola 99.28
TIGR01588288 citE citrate lyase, beta subunit. This is a model 99.09
TIGR01418782 PEP_synth phosphoenolpyruvate synthase. Also calle 99.01
PRK06464795 phosphoenolpyruvate synthase; Validated 98.98
TIGR01417565 PTS_I_fam phosphoenolpyruvate-protein phosphotrans 98.93
PRK11177575 phosphoenolpyruvate-protein phosphotransferase; Pr 98.91
COG2301283 CitE Citrate lyase beta subunit [Carbohydrate tran 98.4
TIGR01344511 malate_syn_A malate synthase A. This model represe 98.3
cd00727511 malate_synt_A Malate synthase A (MSA), present in 98.29
PRK09255531 malate synthase; Validated 98.15
PF02896293 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel 97.98
cd00480511 malate_synt Malate synthase catalyzes the Claisen 97.95
PRK11061748 fused phosphoenolpyruvate-protein phosphotransfera 97.09
PLN02626551 malate synthase 96.84
COG1080574 PtsA Phosphoenolpyruvate-protein kinase (PTS syste 96.38
TIGR01828856 pyru_phos_dikin pyruvate, phosphate dikinase. This 96.38
TIGR02751506 PEPCase_arch phosphoenolpyruvate carboxylase, arch 96.0
PRK13655494 phosphoenolpyruvate carboxylase; Provisional 95.21
PRK09279879 pyruvate phosphate dikinase; Provisional 95.01
PRK00009 911 phosphoenolpyruvate carboxylase; Reviewed 94.35
COG3605756 PtsP Signal transduction protein containing GAF an 93.52
cd00958235 DhnA Class I fructose-1,6-bisphosphate (FBP) aldol 93.52
TIGR01949258 AroFGH_arch predicted phospho-2-dehydro-3-deoxyhep 92.67
PTZ00398 974 phosphoenolpyruvate carboxylase; Provisional 92.64
PRK08649368 inosine 5-monophosphate dehydrogenase; Validated 90.73
COG1751186 Uncharacterized conserved protein [Function unknow 89.94
cd00945201 Aldolase_Class_I Class I aldolases. The class I al 87.65
PTZ00005417 phosphoglycerate kinase; Provisional 86.99
PF00311 794 PEPcase: Phosphoenolpyruvate carboxylase; InterPro 85.66
PRK00694 606 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 85.45
PRK07226267 fructose-bisphosphate aldolase; Provisional 84.89
PF14010491 PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3 83.82
COG0826347 Collagenase and related proteases [Posttranslation 83.79
PF00478352 IMPDH: IMP dehydrogenase / GMP reductase domain; I 83.35
PRK13397250 3-deoxy-7-phosphoheptulonate synthase; Provisional 83.15
PRK00286438 xseA exodeoxyribonuclease VII large subunit; Revie 82.92
COG2352 910 Ppc Phosphoenolpyruvate carboxylase [Energy produc 81.66
TIGR01361260 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate 81.34
TIGR01304369 IMP_DH_rel_2 IMP dehydrogenase family protein. Thi 81.27
PRK15452 443 putative protease; Provisional 80.37
>PLN02461 Probable pyruvate kinase Back     alignment and domain information 
Probab=100.00  E-value=5.1e-128  Score=1014.75  Aligned_cols=460  Identities=79%  Similarity=1.173  Sum_probs=427.2

Q ss_pred             CCCCeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCCCeeEeeecCC
Q 012335            7 NSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTKGPEIRTGFLKD   86 (466)
Q Consensus         7 ~~r~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~GpkiR~g~~~~   86 (466)
                      +.|||||||||||+|+++|+|++|+++|||+||||||||++++|.++++++|++++++|+|++||+||||||||+|.+++
T Consensus        19 ~~r~tKIi~TiGPas~~~e~l~~li~aGm~v~RlN~SHg~~e~h~~~i~~vr~~~~~~g~~i~Il~Dl~GPkIR~g~~~~   98 (511)
T PLN02461         19 RRPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGSHEYHQETLDNLRQAMANTGILCAVMLDTKGPEIRTGFLKD   98 (511)
T ss_pred             cCCCCeEEEEeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCCeEEEeeCCCCceeccccCC
Confidence            56899999999999999999999999999999999999999999999999999999999999999999999999999986


Q ss_pred             CCcEEecCCCEEEEEeCCCCCCCccEEeecchhhhhccCCCCEEEEeCCeEEEEEEEEecCCCeEEEEEeeCeEecCCCc
Q 012335           87 GKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKN  166 (466)
Q Consensus        87 ~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~~v~~gG~l~~~Kg  166 (466)
                      ++++.|++||.++|+.++...++++.++++|++|++.+++||.||+|||+|.|+|++++.+++.++|+|.+||.|+++||
T Consensus        99 ~~~i~l~~G~~v~lt~~~~~~~~~~~i~v~~~~~~~~v~~Gd~IlidDG~i~l~V~~~~~~~~~i~~~v~~gG~l~s~Kg  178 (511)
T PLN02461         99 GKPVQLKQGQEITITTDYSIKGDENMIAMSYKKLAVDVKPGSVILCADGTITLTVLSCDVEAGTVRCRCENSAMLGERKN  178 (511)
T ss_pred             CCceecCCCCEEEEecCCccCCCCCEEEeccHHHHhhcCCCCEEEEeCCEEEEEEEEEecCCCEEEEEEecCcEecCCce
Confidence            55799999999999988656678889999999999999999999999999999999987556899999999999999999


Q ss_pred             cccCCcccCCCCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCCCceEEEeecCHHHHhcHHHHHhcC
Q 012335          167 VNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANS  246 (466)
Q Consensus       167 vnlp~~~~~lp~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~~~~IiaKIE~~~av~nideI~~~s  246 (466)
                      +|+||..+++|+|||||++||.+|++++++|||++||||+++||+++|++|++.|.+++||||||+++|++||+||+++|
T Consensus       179 vnlpg~~~~lp~ltekD~~di~~f~~~~~vD~ia~SFVr~a~DV~~~r~~l~~~~~~~~IiAKIE~~~av~nl~eIi~~s  258 (511)
T PLN02461        179 VNLPGVVVDLPTLTEKDKEDILQWGVPNKIDFIALSFVRKGSDLVEVRKVLGEHAKSILLISKVENQEGLDNFDDILAES  258 (511)
T ss_pred             eeecccccCCCCCCHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHHHHhCCCCCCEEEEECCHHHHHHHHHHHHhc
Confidence            99999999999999999999735999999999999999999999999999998888999999999999999999999999


Q ss_pred             CeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh-----------hhhhc
Q 012335          247 DAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA-----------AENFI  315 (466)
Q Consensus       247 DgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na-----------aE~~~  315 (466)
                      |||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||++||+|||||++|||||           +|++.
T Consensus       259 DgIMVARGDLGvEip~e~vp~~Qk~II~~c~~~gkPVIvATQmLeSMi~np~PTRAEvsDVanAV~dG~D~vMLS~ETA~  338 (511)
T PLN02461        259 DAFMVARGDLGMEIPIEKIFLAQKMMIYKCNLAGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAA  338 (511)
T ss_pred             CEEEEeccccccccCHHHhHHHHHHHHHHHHHcCCCeEEeehhHHHHhhCCCCchHHHHHHHHHHHhCCcEEEEechhcC
Confidence            9999999999999999999999999999999999999999999999999999999999999999           78888


Q ss_pred             cchhh-----HHHHHhh-------------C--CC--CCCcHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCC
Q 012335          316 NYGDL-----FKKIMET-------------A--PV--PMSPLESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPS  373 (466)
Q Consensus       316 ~~~~~-----~~~~~~~-------------~--~~--~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ta~~vSk~RP~  373 (466)
                      +.||.     +.++...             .  ..  +.++.+++|.+|+++|.+++|++|++||.||+||+++|||||.
T Consensus       339 G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~a~aIiv~T~sG~tA~~iSk~RP~  418 (511)
T PLN02461        339 GAYPELAVKTMARICREAEASLDYGALFKEIMRSAPLPMSPLESLASSAVRTANKVKASLIVVLTRGGTTARLVAKYRPA  418 (511)
T ss_pred             CCCHHHHHHHHHHHHHHHHhccchhhhhhhhcccccccCChHHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHhhCCC
Confidence            77662     2222210             0  01  2245789999999999999999999999999999999999999


Q ss_pred             CCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEEe
Q 012335          374 MPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVALHR  453 (466)
Q Consensus       374 ~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~G~~~~GD~VVvv~g  453 (466)
                      |||||+|.|.++|.+++|+|++++++|||+|+|||+|++++......|..+.+++++.|++++++.|++++||.||+++|
T Consensus       419 ~pIia~t~~~~~~~~~~w~~~~~~~ar~l~L~~GV~P~~~~~~~~~~~~~~~~~~i~~a~~~~~~~g~~~~Gd~vvvv~~  498 (511)
T PLN02461        419 VPILSVVVPEITTDSFDWSCSDEAPARHSLIYRGLIPVLAEGSAKATDSESTEEILEAAIEHAKKKGLCKPGDSVVALHR  498 (511)
T ss_pred             CCEEEEecCcccccccccccCCHHHhhhhheecceEEEEecccccccccCCHHHHHHHHHHHHHHcCCCCCcCEEEEEec
Confidence            99999987778888999999999999999999999999876533344667899999999999999999999999999999


Q ss_pred             cCCCcEEEEEEcC
Q 012335          454 MHVASVLKILAVN  466 (466)
Q Consensus       454 ~g~tn~irI~~v~  466 (466)
                      +|+||++||..++
T Consensus       499 ~g~tn~i~v~~v~  511 (511)
T PLN02461        499 IGGASVIKILTVK  511 (511)
T ss_pred             CCCCcEEEEEEeC
Confidence            9999999999874

>PLN02762 pyruvate kinase complex alpha subunit Back     alignment and domain information
>PTZ00066 pyruvate kinase; Provisional Back     alignment and domain information
>PLN02765 pyruvate kinase Back     alignment and domain information
>PRK09206 pyruvate kinase; Provisional Back     alignment and domain information
>COG0469 PykF Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK06247 pyruvate kinase; Provisional Back     alignment and domain information
>PRK06354 pyruvate kinase; Provisional Back     alignment and domain information
>cd00288 Pyruvate_Kinase Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors Back     alignment and domain information
>PRK05826 pyruvate kinase; Provisional Back     alignment and domain information
>PLN02623 pyruvate kinase Back     alignment and domain information
>PTZ00300 pyruvate kinase; Provisional Back     alignment and domain information
>KOG2323 consensus Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01064 pyruv_kin pyruvate kinase Back     alignment and domain information
>PRK06739 pyruvate kinase; Validated Back     alignment and domain information
>PF00224 PK: Pyruvate kinase, barrel domain; InterPro: IPR015793 Pyruvate kinase (2 Back     alignment and domain information
>PRK14725 pyruvate kinase; Provisional Back     alignment and domain information
>PRK08187 pyruvate kinase; Validated Back     alignment and domain information
>PF02887 PK_C: Pyruvate kinase, alpha/beta domain; InterPro: IPR015795 Pyruvate kinase (2 Back     alignment and domain information
>PRK10558 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional Back     alignment and domain information
>TIGR03239 GarL 2-dehydro-3-deoxyglucarate aldolase Back     alignment and domain information
>PRK10128 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional Back     alignment and domain information
>PF03328 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family; InterPro: IPR005000 This family includes 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (4 Back     alignment and domain information
>TIGR02311 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Back     alignment and domain information
>COG3836 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01588 citE citrate lyase, beta subunit Back     alignment and domain information
>TIGR01418 PEP_synth phosphoenolpyruvate synthase Back     alignment and domain information
>PRK06464 phosphoenolpyruvate synthase; Validated Back     alignment and domain information
>TIGR01417 PTS_I_fam phosphoenolpyruvate-protein phosphotransferase Back     alignment and domain information
>PRK11177 phosphoenolpyruvate-protein phosphotransferase; Provisional Back     alignment and domain information
>COG2301 CitE Citrate lyase beta subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01344 malate_syn_A malate synthase A Back     alignment and domain information
>cd00727 malate_synt_A Malate synthase A (MSA), present in some bacteria, plants and fungi Back     alignment and domain information
>PRK09255 malate synthase; Validated Back     alignment and domain information
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ] Back     alignment and domain information
>cd00480 malate_synt Malate synthase catalyzes the Claisen condensation of glyoxylate and acetyl-CoA to malyl-CoA , which hydrolyzes to malate and CoA Back     alignment and domain information
>PRK11061 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; Provisional Back     alignment and domain information
>PLN02626 malate synthase Back     alignment and domain information
>COG1080 PtsA Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01828 pyru_phos_dikin pyruvate, phosphate dikinase Back     alignment and domain information
>TIGR02751 PEPCase_arch phosphoenolpyruvate carboxylase, archaeal type Back     alignment and domain information
>PRK13655 phosphoenolpyruvate carboxylase; Provisional Back     alignment and domain information
>PRK09279 pyruvate phosphate dikinase; Provisional Back     alignment and domain information
>PRK00009 phosphoenolpyruvate carboxylase; Reviewed Back     alignment and domain information
>COG3605 PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms] Back     alignment and domain information
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea Back     alignment and domain information
>TIGR01949 AroFGH_arch predicted phospho-2-dehydro-3-deoxyheptonate aldolase Back     alignment and domain information
>PTZ00398 phosphoenolpyruvate carboxylase; Provisional Back     alignment and domain information
>PRK08649 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>COG1751 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>cd00945 Aldolase_Class_I Class I aldolases Back     alignment and domain information
>PTZ00005 phosphoglycerate kinase; Provisional Back     alignment and domain information
>PF00311 PEPcase: Phosphoenolpyruvate carboxylase; InterPro: IPR021135 Phosphoenolpyruvate carboxylase (PEPCase), an enzyme found in all multicellular plants, catalyses the formation of oxaloacetate from phosphoenolpyruvate (PEP) and a hydrocarbonate ion [] Back     alignment and domain information
>PRK00694 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Validated Back     alignment and domain information
>PRK07226 fructose-bisphosphate aldolase; Provisional Back     alignment and domain information
>PF14010 PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3ODM_C Back     alignment and domain information
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase Back     alignment and domain information
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional Back     alignment and domain information
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed Back     alignment and domain information
>COG2352 Ppc Phosphoenolpyruvate carboxylase [Energy production and conversion] Back     alignment and domain information
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase Back     alignment and domain information
>TIGR01304 IMP_DH_rel_2 IMP dehydrogenase family protein Back     alignment and domain information
>PRK15452 putative protease; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query466
3eoe_A511 Crystal Structure Of Pyruvate Kinase From Toxoplasm 1e-110
3khd_A520 Crystal Structure Of Pff1300w. Length = 520 1e-106
3ma8_A534 Crystal Structure Of Cgd1_2040, A Pyruvate Kinase F 1e-98
4drs_A526 Crystal Structure Of Cryptosporidium Parvum Pyruvat 2e-98
3u2z_A533 Activator-Bound Structure Of Human Pyruvate Kinase 5e-97
3bjt_A530 Pyruvate Kinase M2 Is A Phosphotyrosine Binding Pro 5e-97
1t5a_A567 Human Pyruvate Kinase M2 Length = 567 5e-97
4g1n_A518 Pkm2 In Complex With An Activator Length = 518 6e-97
3bjf_A518 Pyruvate Kinase M2 Is A Phosphotyrosine Binding Pro 6e-97
3gqy_A550 Activator-Bound Structure Of Human Pyruvate Kinase 6e-97
3srd_A551 Human M2 Pyruvate Kinase In Complex With Fructose 1 7e-97
1zjh_A548 Structure Of Human Muscle Pyruvate Kinase (Pkm2) Le 8e-97
3g2g_A533 S437y Mutant Of Human Muscle Pyruvate Kinase, Isofo 1e-96
4b2d_D548 Human Pkm2 With L-serine And Fbp Bound Length = 548 1e-96
3qv9_A499 Crystal Structure Of Trypanosoma Cruzi Pyruvate Kin 5e-96
3srf_C551 Human M1 Pyruvate Kinase Length = 551 1e-94
1f3x_A530 S402p Mutant Of Rabbit Muscle Pyruvate Kinase Lengt 1e-93
3n25_A531 The Structure Of Muscle Pyruvate Kinase In Complex 9e-93
2g50_A530 The Location Of The Allosteric Amino Acid Binding S 9e-93
1aqf_A530 Pyruvate Kinase From Rabbit Muscle With Mg, K, And 1e-92
1pkm_A530 The Refined Three-Dimensional Structure Of Cat Musc 1e-92
1f3w_A530 Recombinant Rabbit Muscle Pyruvate Kinase Length = 1e-92
1pkn_A530 Structure Of Rabbit Muscle Pyruvate Kinase Complexe 6e-92
4ip7_A543 Structure Of The S12d Variant Of Human Liver Pyruva 1e-90
2vgb_A528 Human Erythrocyte Pyruvate Kinase Length = 528 1e-90
2vgg_A528 Human Erythrocyte Pyruvate Kinase: R479h Mutant Len 2e-90
2vgi_A528 Human Erythrocyte Pyruvate Kinase: R486w Mutant Len 4e-90
2vgf_A528 Human Erythrocyte Pyruvate Kinase: T384m Mutant Len 5e-90
4ima_A543 The Structure Of C436m-hlpyk In Complex With Citrat 6e-90
1pky_A470 Pyruvate Kinase From E. Coli In The T-State Length 6e-89
1e0u_A470 Structure R271l Mutant Of E. Coli Pyruvate Kinase L 9e-89
1e0t_A470 R292d Mutant Of E. Coli Pyruvate Kinase Length = 47 5e-88
3pp7_A498 Crystal Structure Of Leishmania Mexicana Pyruvate K 8e-88
1pkl_A499 The Structure Of Leishmania Pyruvate Kinase Length 9e-88
2e28_A 587 Crystal Structure Analysis Of Pyruvate Kinase From 2e-87
3e0v_A539 Crystal Structure Of Pyruvate Kinase From Leishmani 1e-86
3t05_A606 Crystal Structure Of S. Aureus Pyruvate Kinase Leng 3e-84
1a3w_A500 Pyruvate Kinase From Saccharomyces Cerevisiae Compl 1e-78
3qtg_A461 Crystal Structure Of Pyruvate Kinase From Pyrobacul 3e-29
>pdb|3EOE|A Chain A, Crystal Structure Of Pyruvate Kinase From Toxoplasma Gondii, 55.M00007 Length = 511 Back     alignment and structure 
Iteration: 1

 Score =  395 bits (1016), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/495 (43%), Positives = 303/495 (61%), Gaps = 60/495 (12%)
Query: 10  KTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNT-GILC 68
           +T+IVCT+GPA  +V+   K++ AGMNV R NFSHG H  H  T+ N++ AM        
Sbjct: 37  RTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPEARL 96
Query: 69  AVMLDTKGPEIRTGFLKDGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGS 128
           A++LDTKGPEIRTGFLKD KPI L QG  + I TDY+L GDE  I+ SY  L + ++PG+
Sbjct: 97  AILLDTKGPEIRTGFLKDHKPITLQQGATLKIVTDYNLIGDETTIACSYGALPQSVKPGN 156
Query: 129 VILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVIVDLPTLTEKDKEDIL 188
            IL +DG++S+ V++   +   V  + +N+A +GERKN+NLP V V LP + EKDK DIL
Sbjct: 157 TILIADGSLSVKVVEVGSDY--VITQAQNTATIGERKNMNLPNVKVQLPVIGEKDKHDIL 214
Query: 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDA 248
           N+G+P   + IA SFV+   D+  +R LL    ++I ++ K+EN+EG+ NFD++LA +D 
Sbjct: 215 NFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAEADG 274
Query: 249 FMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVA 308
            M+ARGDLGMEIP EK+FLAQK+MI K N+ GKPV+TATQMLESMIK+PRPTRAEA DVA
Sbjct: 275 IMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVA 334
Query: 309 NA---------------------------------AENFINYGDLFKKIMETAPVPMSPL 335
           NA                                 AE  ++Y  L++ +    P P+S  
Sbjct: 335 NAVLDGTDCVMLSGETANGEFPVITVETMARICYEAETCVDYPALYRAMCLAVPPPISTQ 394
Query: 336 ESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMPILSVIVPEIKTDSIVWSCSD 395
           E++A +AV TA C+ AA+IL LT  G TA++++KYRP  PIL++              + 
Sbjct: 395 EAVARAAVETAECVNAAIILALTETGQTARLIAKYRPMQPILAL-------------SAS 441
Query: 396 EAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVALHRMH 455
           E+  +H  + R +       + +    + T+  I  A+  AK + L   G+S+VA+H M 
Sbjct: 442 ESTIKHLQVIRGVT------TMQVPSFQGTDHVIRNAIVVAKERELVTEGESIVAVHGMK 495
Query: 456 -----VASVLKILAV 465
                 +++LK+L V
Sbjct: 496 EEVAGSSNLLKVLTV 510
>pdb|3KHD|A Chain A, Crystal Structure Of Pff1300w. Length = 520 Back     alignment and structure
>pdb|3MA8|A Chain A, Crystal Structure Of Cgd1_2040, A Pyruvate Kinase From Cryptosporidium Parvum Length = 534 Back     alignment and structure
>pdb|4DRS|A Chain A, Crystal Structure Of Cryptosporidium Parvum Pyruvate Kinase Length = 526 Back     alignment and structure
>pdb|3U2Z|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2 Length = 533 Back     alignment and structure
>pdb|3BJT|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein Length = 530 Back     alignment and structure
>pdb|1T5A|A Chain A, Human Pyruvate Kinase M2 Length = 567 Back     alignment and structure
>pdb|4G1N|A Chain A, Pkm2 In Complex With An Activator Length = 518 Back     alignment and structure
>pdb|3BJF|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein Length = 518 Back     alignment and structure
>pdb|3GQY|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2 Length = 550 Back     alignment and structure
>pdb|3SRD|A Chain A, Human M2 Pyruvate Kinase In Complex With Fructose 1-6 Bisphosphate And Oxalate. Length = 551 Back     alignment and structure
>pdb|1ZJH|A Chain A, Structure Of Human Muscle Pyruvate Kinase (Pkm2) Length = 548 Back     alignment and structure
>pdb|3G2G|A Chain A, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2 Length = 533 Back     alignment and structure
>pdb|4B2D|D Chain D, Human Pkm2 With L-serine And Fbp Bound Length = 548 Back     alignment and structure
>pdb|3QV9|A Chain A, Crystal Structure Of Trypanosoma Cruzi Pyruvate Kinase(Tcpyk)in Complex With Ponceau S. Length = 499 Back     alignment and structure
>pdb|3SRF|C Chain C, Human M1 Pyruvate Kinase Length = 551 Back     alignment and structure
>pdb|1F3X|A Chain A, S402p Mutant Of Rabbit Muscle Pyruvate Kinase Length = 530 Back     alignment and structure
>pdb|3N25|A Chain A, The Structure Of Muscle Pyruvate Kinase In Complex With Proline, Pyruvate, And Mn2+ Length = 531 Back     alignment and structure
>pdb|2G50|A Chain A, The Location Of The Allosteric Amino Acid Binding Site Of Muscle Pyruvate Kinase. Length = 530 Back     alignment and structure
>pdb|1AQF|A Chain A, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L- Phospholactate Length = 530 Back     alignment and structure
>pdb|1PKM|A Chain A, The Refined Three-Dimensional Structure Of Cat Muscle (M1) Pyruvate Kinase, At A Resolution Of 2.6 Angstroms Length = 530 Back     alignment and structure
>pdb|1F3W|A Chain A, Recombinant Rabbit Muscle Pyruvate Kinase Length = 530 Back     alignment and structure
>pdb|1PKN|A Chain A, Structure Of Rabbit Muscle Pyruvate Kinase Complexed With Mn2+, K+, And Pyruvate Length = 530 Back     alignment and structure
>pdb|4IP7|A Chain A, Structure Of The S12d Variant Of Human Liver Pyruvate Kinase In Complex With Citrate And Fbp. Length = 543 Back     alignment and structure
>pdb|2VGB|A Chain A, Human Erythrocyte Pyruvate Kinase Length = 528 Back     alignment and structure
>pdb|2VGG|A Chain A, Human Erythrocyte Pyruvate Kinase: R479h Mutant Length = 528 Back     alignment and structure
>pdb|2VGI|A Chain A, Human Erythrocyte Pyruvate Kinase: R486w Mutant Length = 528 Back     alignment and structure
>pdb|2VGF|A Chain A, Human Erythrocyte Pyruvate Kinase: T384m Mutant Length = 528 Back     alignment and structure
>pdb|4IMA|A Chain A, The Structure Of C436m-hlpyk In Complex With Citrate/mn/atp/fru-1,6-bp Length = 543 Back     alignment and structure
>pdb|1PKY|A Chain A, Pyruvate Kinase From E. Coli In The T-State Length = 470 Back     alignment and structure
>pdb|1E0U|A Chain A, Structure R271l Mutant Of E. Coli Pyruvate Kinase Length = 470 Back     alignment and structure
>pdb|1E0T|A Chain A, R292d Mutant Of E. Coli Pyruvate Kinase Length = 470 Back     alignment and structure
>pdb|3PP7|A Chain A, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase In Complex With The Drug Suramin, An Inhibitor Of Glycolysis. Length = 498 Back     alignment and structure
>pdb|1PKL|A Chain A, The Structure Of Leishmania Pyruvate Kinase Length = 499 Back     alignment and structure
>pdb|2E28|A Chain A, Crystal Structure Analysis Of Pyruvate Kinase From Bacillus Stearothermophilus Length = 587 Back     alignment and structure
>pdb|3E0V|A Chain A, Crystal Structure Of Pyruvate Kinase From Leishmania Mexicana In Complex With Sulphate Ions Length = 539 Back     alignment and structure
>pdb|3T05|A Chain A, Crystal Structure Of S. Aureus Pyruvate Kinase Length = 606 Back     alignment and structure
>pdb|1A3W|A Chain A, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed With Fbp, Pg, Mn2+ And K+ Length = 500 Back     alignment and structure
>pdb|3QTG|A Chain A, Crystal Structure Of Pyruvate Kinase From Pyrobaculum Aerophilum Length = 461 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query466
3gg8_A511 Pyruvate kinase; malaria, genomics, proteomics, gl 0.0
3khd_A520 Pyruvate kinase; malaria, structural genomics, str 0.0
1e0t_A470 Pyruvate kinase, PK; phosphotransferase, glycolysi 0.0
3hqn_D499 Pyruvate kinase, PK; TIM barrel, T-state enzyme, t 0.0
3ma8_A534 Pyruvate kinase; parasitology, pyruvate kiase, gly 0.0
1a3w_A500 Pyruvate kinase; allosteric regulation, tranferase 0.0
3t05_A 606 Pyruvate kinase, PK; tetramer, glycolysis, transfe 0.0
3gr4_A550 Pyruvate kinase isozymes M1/M2; activator, acetyla 0.0
2e28_A 587 Pyruvate kinase, PK; allosteric, transferase; 2.40 0.0
3qtg_A461 Pyruvate kinase, PK; TIM barrel, glycolysis, trans 1e-159
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A Length = 511 Back     alignment and structure
 Score =  629 bits (1626), Expect = 0.0
 Identities = 214/495 (43%), Positives = 302/495 (61%), Gaps = 60/495 (12%)

Query: 10  KTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAM-NNTGILC 68
           +T+IVCT+GPA  +V+   K++ AGMNV R NFSHG H  H  T+ N++ AM        
Sbjct: 37  RTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPEARL 96

Query: 69  AVMLDTKGPEIRTGFLKDGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGS 128
           A++LDTKGPEIRTGFLKD KPI L QG  + I TDY+L GDE  I+ SY  L + ++PG+
Sbjct: 97  AILLDTKGPEIRTGFLKDHKPITLQQGATLKIVTDYNLIGDETTIACSYGALPQSVKPGN 156

Query: 129 VILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVIVDLPTLTEKDKEDIL 188
            IL +DG++S+ V++   +   V  + +N+A +GERKN+NLP V V LP + EKDK DIL
Sbjct: 157 TILIADGSLSVKVVEVGSDY--VITQAQNTATIGERKNMNLPNVKVQLPVIGEKDKHDIL 214

Query: 189 NWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDA 248
           N+G+P   + IA SFV+   D+  +R LL    ++I ++ K+EN+EG+ NFD++LA +D 
Sbjct: 215 NFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAEADG 274

Query: 249 FMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVA 308
            M+ARGDLGMEIP EK+FLAQK+MI K N+ GKPV+TATQMLESMIK+PRPTRAEA DVA
Sbjct: 275 IMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVA 334

Query: 309 NA---------------------------------AENFINYGDLFKKIMETAPVPMSPL 335
           NA                                 AE  ++Y  L++ +    P P+S  
Sbjct: 335 NAVLDGTDCVMLSGETANGEFPVITVETMARICYEAETCVDYPALYRAMCLAVPPPISTQ 394

Query: 336 ESLASSAVRTANCIKAALILVLTRGGTTAKMVSKYRPSMPILSVIVPEIKTDSIVWSCSD 395
           E++A +AV TA C+ AA+IL LT  G TA++++KYRP  PIL++              + 
Sbjct: 395 EAVARAAVETAECVNAAIILALTETGQTARLIAKYRPMQPILAL-------------SAS 441

Query: 396 EAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGLCRPGDSVVALHRMH 455
           E+  +H  + R +  +           + T+  I  A+  AK + L   G+S+VA+H M 
Sbjct: 442 ESTIKHLQVIRGVTTMQ------VPSFQGTDHVIRNAIVVAKERELVTEGESIVAVHGMK 495

Query: 456 V-----ASVLKILAV 465
                 +++LK+L V
Sbjct: 496 EEVAGSSNLLKVLTV 510
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} Length = 520 Back     alignment and structure
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A Length = 470 Back     alignment and structure
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* Length = 499 Back     alignment and structure
>3ma8_A Pyruvate kinase; parasitology, pyruvate kiase, glycol kinase, magnesium, transferase, structural genomi structural genomics consortium; HET: CIT; 2.64A {Cryptosporidium parvum} Length = 534 Back     alignment and structure
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A Length = 500 Back     alignment and structure
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* Length = 606 Back     alignment and structure
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 1zjh_A 3g2g_A 1t5a_A* 3bjt_A 3bjf_A* 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* 1aqf_A* 1pkm_A 2g50_A* 1pkn_A 2vgb_A* 2vgf_A* 2vgg_A* ... Length = 550 Back     alignment and structure
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Length = 587 Back     alignment and structure
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} Length = 461 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query466
4drs_A526 Pyruvate kinase; glycolysis, allosteric EN transfe 100.0
3gr4_A550 Pyruvate kinase isozymes M1/M2; activator, acetyla 100.0
3khd_A520 Pyruvate kinase; malaria, structural genomics, str 100.0
3gg8_A511 Pyruvate kinase; malaria, genomics, proteomics, gl 100.0
3hqn_D499 Pyruvate kinase, PK; TIM barrel, T-state enzyme, t 100.0
3t05_A 606 Pyruvate kinase, PK; tetramer, glycolysis, transfe 100.0
1e0t_A470 Pyruvate kinase, PK; phosphotransferase, glycolysi 100.0
3qtg_A461 Pyruvate kinase, PK; TIM barrel, glycolysis, trans 100.0
2e28_A 587 Pyruvate kinase, PK; allosteric, transferase; 2.40 100.0
1a3w_A500 Pyruvate kinase; allosteric regulation, tranferase 100.0
2vws_A267 YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escher 99.57
2v5j_A287 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; l 99.55
1sgj_A284 Citrate lyase, beta subunit; trimer, TIM barrel, s 99.54
3qz6_A261 HPCH/HPAI aldolase; structural genomics, PSI-biolo 99.52
1dxe_A256 2-dehydro-3-deoxy-galactarate aldolase; class II a 99.52
1izc_A339 Macrophomate synthase intermolecular diels-aldera; 99.49
2xz9_A324 Phosphoenolpyruvate-protein kinase (PTS system EI 99.15
3qll_A316 Citrate lyase; beta barrel; 2.45A {Yersinia pestis 99.01
3qqw_A332 Putative citrate lyase; TIM beta/alpha-barrel, str 98.92
1u5h_A273 CITE; TIM barrel, structural genomics, PSI, protei 98.88
2ols_A794 Phosphoenolpyruvate synthase; MC structural genomi 98.86
3r4i_A339 Citrate lyase; TIM beta/alpha-barrel, structural g 98.83
2hwg_A575 Phosphoenolpyruvate-protein phosphotransferase; en 98.79
2wqd_A572 Phosphoenolpyruvate-protein phosphotransferase; ki 98.76
3oyz_A433 Malate synthase; TIM barrel, transferase; HET: ACO 98.67
1vbg_A876 Pyruvate,orthophosphate dikinase; transferase, mai 98.08
1kbl_A873 PPDK, pyruvate phosphate dikinase; transferase, ph 97.97
3cuz_A532 MSA, malate synthase A; TIM barrel, cytoplasm, gly 97.93
3cux_A528 Malate synthase; TIM barrel, glyoxylate bypass, tr 97.38
1p7t_A731 MSG, malate synthase G; TIM barrel, glyoxylate cyc 97.25
1h6z_A913 Pyruvate phosphate dikinase; transferase, tropical 96.81
2x0s_A913 Pyruvate phosphate dikinase; transferase, tropical 95.1
3odm_A 560 Pepcase, PEPC, phosphoenolpyruvate carboxylase; be 94.62
1vp8_A201 Hypothetical protein AF0103; putative pyruvate kin 94.28
1jqo_A 970 Phosphoenolpyruvate carboxylase; beta barrel, carb 94.24
1t57_A206 Conserved protein MTH1675; structural genomics, FM 93.92
1jqn_A 883 Pepcase, PEPC, phosphoenolpyruvate carboxylase; be 92.99
2qjg_A273 Putative aldolase MJ0400; beta-alpha barrel, lyase 92.31
1w8s_A263 FBP aldolase, fructose-bisphosphate aldolase class 91.7
4g9p_A406 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; 84.26
1p1x_A260 Deoxyribose-phosphate aldolase; alpha-beta barrel, 81.4
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A* Back     alignment and structure
Probab=100.00  E-value=2.8e-128  Score=1022.06  Aligned_cols=442  Identities=46%  Similarity=0.712  Sum_probs=408.9

Q ss_pred             CCCCCCCCeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHH-HcCCceEEEecCCCCeeEe
Q 012335            3 GDHQNSPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMN-NTGILCAVMLDTKGPEIRT   81 (466)
Q Consensus         3 ~~~~~~r~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~-~~~~~i~i~~Dl~GpkiR~   81 (466)
                      +++.+.|||||||||||+|+++++|++|+++||||||||||||++++|.++++++|++++ ++|+||+||+||+||||||
T Consensus        38 ~~~~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~~vaIl~Dl~GPkIR~  117 (526)
T 4drs_A           38 DNDVTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPHSTVGIMLDTKGPEIRT  117 (526)
T ss_dssp             ----CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTCTTCCCEEEEECCCSCCBB
T ss_pred             cCCcccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCCCceEEEEECCCCeeEE
Confidence            345678999999999999999999999999999999999999999999999999999987 6899999999999999999


Q ss_pred             eecCCCCcEEecCCCEEEEEeCCCCCCCccEEeecchhhhhccCCCCEEEEeCCeEEEEEEEEecCCCeEEEEEeeCeEe
Q 012335           82 GFLKDGKPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVL  161 (466)
Q Consensus        82 g~~~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~~v~~gG~l  161 (466)
                      |.++++++++|++||+|+|+.+....|+++.++++|++|++++++||.||+|||+|.|+|++++  ++.+.|+|.+||.|
T Consensus       118 g~~~~~~~i~L~~G~~v~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~--~~~i~~~V~~gG~L  195 (526)
T 4drs_A          118 GMLEGGKPIELKAGQTLKITTDYSMLGNSECISCSYSLLPKSVQIGSTVLIADGSLSTQVLEIG--DDFIVCKVLNSVTI  195 (526)
T ss_dssp             CCBSTTCCEECCTTSEEEEESCCSSCBCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEC--SSEEEEECCSCCEE
T ss_pred             EecCCCCeEEecCCCEEEEEeCCccCCCcceeeecchhhHHHhcCCCEEEEeCCCceEEEEEEe--CCeEEEEeccCccc
Confidence            9998877899999999999998777889999999999999999999999999999999999995  78999999999999


Q ss_pred             cCCCccccCCcccCCCCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcCC-------CceEEEeecCHH
Q 012335          162 GERKNVNLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAK-------NILLMSKVENLE  234 (466)
Q Consensus       162 ~~~Kgvnlp~~~~~lp~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~~-------~~~IiaKIE~~~  234 (466)
                      +++||||+|+..+++|+|||||.+|+.+||+++|+|||++||||+++||.++|++|++.|.       +++||||||+++
T Consensus       196 ~~~KgvNlP~~~l~lp~lTekD~~D~l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~  275 (526)
T 4drs_A          196 GERKNMNLPGCKVHLPIIGDKDRHDIVDFALKYNLDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLE  275 (526)
T ss_dssp             CSSCBEECTTCCCCCCSSCHHHHHHHHHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHH
T ss_pred             cccccccCCCcccCcccccchhHHHHHHHHHHhccCeeeecccCchhhHHHHHHHHHhhCcccccccccceeeeehhccH
Confidence            9999999999999999999999998328999999999999999999999999999998763       689999999999


Q ss_pred             HHhcHHHHHhcCCeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh----
Q 012335          235 GVANFDDVLANSDAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA----  310 (466)
Q Consensus       235 av~nideI~~~sDgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na----  310 (466)
                      |++|||||+++||||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||++||+|||||++|||||    
T Consensus       276 av~NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DG  355 (526)
T 4drs_A          276 GVINFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDG  355 (526)
T ss_dssp             HHHTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999    


Q ss_pred             -------hhhhccchh----------------------hHHHHHhhCCCCCCcHHHHHHHHHHHHHhcCCcEEEEEcCCc
Q 012335          311 -------AENFINYGD----------------------LFKKIMETAPVPMSPLESLASSAVRTANCIKAALILVLTRGG  361 (466)
Q Consensus       311 -------aE~~~~~~~----------------------~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG  361 (466)
                             +|++.+.||                      +++.+....+.+.+..+++|.+|+++|++++|++||+||.||
T Consensus       356 aDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~sG  435 (526)
T 4drs_A          356 SDCVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHSSVPKPVAVPEAIACSAVESAHDVNAKLIITITETG  435 (526)
T ss_dssp             CSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred             CceEEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhhhhccCCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCc
Confidence                   566665544                      344444445566788999999999999999999999999999


Q ss_pred             hHHHHHHhcCCCCCEEEEEeccccccccccccCChhhhhhhcCccCcEEEEcCCCCCCCCccCHHHHHHHHHHHHHHcCC
Q 012335          362 TTAKMVSKYRPSMPILSVIVPEIKTDSIVWSCSDEAPARHSLIFRALVPVLSSGSARASDEESTEETIEFALQHAKAKGL  441 (466)
Q Consensus       362 ~ta~~vSk~RP~~PIiAv~~~~~~tt~~~w~~~~~~~aR~l~L~~GV~P~l~~~~~~~~~~~~~e~~i~~al~~~~~~G~  441 (466)
                      +||+++|||||.|||||+       |      ++++++|||+|+|||+|++++..      .+.|++++.|+++++++|+
T Consensus       436 ~tA~~iSr~RP~~pI~a~-------T------~~~~~~r~l~L~wGV~p~~~~~~------~~~d~~i~~a~~~~~~~g~  496 (526)
T 4drs_A          436 NTARLISKYRPSQTIIAC-------T------AKPEVARGLKIARGVKTYVLNSI------HHSEVVISNALALAKEESL  496 (526)
T ss_dssp             HHHHHHHHTCCSSEEEEE-------E------SCHHHHHHGGGSTTEEEEECSCC------CCHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHhhCCCCCEEEE-------C------CCHHHHHhhhccCCeEEEEeCCC------CCHHHHHHHHHHHHHHCCC
Confidence            999999999999999999       4      99999999999999999999763      7889999999999999999


Q ss_pred             CCCCCEEEEEEec-----CCCcEEEEEEc
Q 012335          442 CRPGDSVVALHRM-----HVASVLKILAV  465 (466)
Q Consensus       442 ~~~GD~VVvv~g~-----g~tn~irI~~v  465 (466)
                      +++||.||+++|+     |+||+|||++|
T Consensus       497 ~~~GD~vVi~~G~p~g~~G~TN~lrv~~V  525 (526)
T 4drs_A          497 IESGDFAIAVHGVKESCPGSCNLMKIVRC  525 (526)
T ss_dssp             CCTTCEEEEEC----------CCEEEEEC
T ss_pred             CCCcCEEEEEeccCCCCCCcceEEEEEEC
Confidence            9999999999998     89999999987
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ... Back     alignment and structure
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} Back     alignment and structure
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A Back     alignment and structure
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* Back     alignment and structure
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A* Back     alignment and structure
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A Back     alignment and structure
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} Back     alignment and structure
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Back     alignment and structure
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A Back     alignment and structure
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A Back     alignment and structure
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A Back     alignment and structure
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5 Back     alignment and structure
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0 Back     alignment and structure
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A Back     alignment and structure
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5 Back     alignment and structure
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A* Back     alignment and structure
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis} Back     alignment and structure
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha} Back     alignment and structure
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A Back     alignment and structure
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis} Back     alignment and structure
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans} Back     alignment and structure
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A Back     alignment and structure
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A Back     alignment and structure
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A Back     alignment and structure
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A* Back     alignment and structure
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A Back     alignment and structure
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A* Back     alignment and structure
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis} Back     alignment and structure
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A Back     alignment and structure
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A Back     alignment and structure
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei} Back     alignment and structure
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens} Back     alignment and structure
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2 Back     alignment and structure
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3 Back     alignment and structure
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2 Back     alignment and structure
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A Back     alignment and structure
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A Back     alignment and structure
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A Back     alignment and structure
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A* Back     alignment and structure
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 466
d1pkla2258 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-ter 5e-38
d1pkla2258 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-ter 9e-23
d2g50a2282 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-t 8e-36
d2g50a2282 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-t 2e-25
d1a3xa2265 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-ter 1e-33
d1a3xa2265 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-ter 1e-22
d1e0ta2246 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-ter 3e-33
d1e0ta2246 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-ter 5e-25
d1a3xa1101 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's 8e-30
d2g50a1102 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit 1e-29
d1e0ta198 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escheric 1e-28
d2vgba1102 b.58.1.1 (A:160-261) Pyruvate kinase (PK) {Human ( 1e-26
d1pkla3141 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal d 4e-25
d1a3xa3134 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal d 6e-25
d1pkla199 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishman 9e-25
d2vgba3134 c.49.1.1 (A:440-573) Pyruvate kinase, C-terminal d 2e-24
d2g50a3135 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal d 5e-21
d1e0ta3117 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal d 2e-13
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 258 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Phosphoenolpyruvate/pyruvate domain
family: Pyruvate kinase
domain: Pyruvate kinase, N-terminal domain
species: Leishmania mexicana [TaxId: 5665]

 Score =  137 bits (345), Expect = 5e-38
 Identities = 74/184 (40%), Positives = 106/184 (57%), Gaps = 10/184 (5%)

Query: 130 ILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNVNLPGVIVDLPTLTEKDKEDILN 189
           +  S G+           +  VR             N+ +       P ++ KD+ D+  
Sbjct: 50  MNFSHGSHE----YHQTTINNVRQAAAEL-----GVNIAIALDTKGPPAVSAKDRVDL-Q 99

Query: 190 WGVPNKIDMIALSFVRKGSDLVEVRNLLRVHAKNILLMSKVENLEGVANFDDVLANSDAF 249
           +GV   +DMI  SF+R    + +VR  L    ++I+++ K+EN +GV N D ++  SD  
Sbjct: 100 FGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSIIEESDGI 159

Query: 250 MVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVAN 309
           MVARGDLG+EIP EK+ +AQK++I K N+ GKPV+ ATQMLESM  +PRPTRAE +DVAN
Sbjct: 160 MVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVAN 219

Query: 310 AAEN 313
           A  N
Sbjct: 220 AVFN 223
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 258 Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 282 Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 282 Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 265 Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 265 Back     information, alignment and structure
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 246 Back     information, alignment and structure
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 246 Back     information, alignment and structure
>d1a3xa1 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 101 Back     information, alignment and structure
>d2g50a1 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 102 Back     information, alignment and structure
>d1e0ta1 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escherichia coli [TaxId: 562]} Length = 98 Back     information, alignment and structure
>d1pkla3 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 141 Back     information, alignment and structure
>d1a3xa3 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 134 Back     information, alignment and structure
>d1pkla1 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 5665]} Length = 99 Back     information, alignment and structure
>d2g50a3 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 135 Back     information, alignment and structure
>d1e0ta3 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 117 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query466
d1e0ta2246 Pyruvate kinase, N-terminal domain {Escherichia co 100.0
d1pkla2258 Pyruvate kinase, N-terminal domain {Leishmania mex 100.0
d1a3xa2265 Pyruvate kinase, N-terminal domain {Baker's yeast 100.0
d2g50a2282 Pyruvate kinase, N-terminal domain {Rabbit (Orycto 100.0
d1pkla3141 Pyruvate kinase, C-terminal domain {Leishmania mex 99.97
d2vgba3134 Pyruvate kinase, C-terminal domain {Human (Homo sa 99.97
d1a3xa3134 Pyruvate kinase, C-terminal domain {Baker's yeast 99.97
d2g50a3135 Pyruvate kinase, C-terminal domain {Rabbit (Orycto 99.97
d1e0ta3117 Pyruvate kinase, C-terminal domain {Escherichia co 99.97
d1e0ta198 Pyruvate kinase (PK) {Escherichia coli [TaxId: 562 99.9
d1a3xa1101 Pyruvate kinase (PK) {Baker's yeast (Saccharomyces 99.9
d2g50a1102 Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculu 99.89
d2vgba1102 Pyruvate kinase (PK) {Human (Homo sapiens) [TaxId: 99.89
d1pkla199 Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 99.88
d1dxea_253 2-dehydro-3-deoxy-galactarate aldolase {Escherichi 99.49
d1izca_299 Macrophomate synthase {Macrophoma commelinae [TaxI 99.42
d1sgja_231 Citrate lyase, beta subunit {Deinococcus radiodura 98.73
d1u5ha_223 Citrate lyase, beta subunit {Mycobacterium tubercu 98.48
d1kbla1364 Pyruvate phosphate dikinase, C-terminal domain {Cl 96.92
d1vbga1356 Pyruvate phosphate dikinase, C-terminal domain {Ma 96.64
d1h6za1366 Pyruvate phosphate dikinase, C-terminal domain {Tr 95.89
d1t57a_186 Hypothetical protein MTH1675 {Methanobacterium the 93.0
d1vp8a_190 Hypothetical protein AF0103 {Archaeoglobus fulgidu 92.84
d1jqoa_ 936 Phosphoenolpyruvate carboxylase {Escherichia coli 89.61
d1jqna_ 880 Phosphoenolpyruvate carboxylase {Escherichia coli 87.03
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Phosphoenolpyruvate/pyruvate domain
family: Pyruvate kinase
domain: Pyruvate kinase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-70  Score=531.75  Aligned_cols=212  Identities=55%  Similarity=0.831  Sum_probs=191.0

Q ss_pred             CCCeEEEEecCCCCCCHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCCCeeEeeecCCC
Q 012335            8 SPKTKIVCTLGPASRSVEMAEKLLRAGMNVARFNFSHGSHAYHQETLDNLRTAMNNTGILCAVMLDTKGPEIRTGFLKDG   87 (466)
Q Consensus         8 ~r~tkIi~TiGp~~~~~~~l~~li~~G~~v~RiN~shg~~~~~~~~i~~ir~~~~~~~~~i~i~~Dl~GpkiR~g~~~~~   87 (466)
                      .|||||||||||+|++++.|++|+++||||||||||||++++|.++++++|++++++|++++|++||+||+         
T Consensus         1 mrkTKIIaTiGPas~~~~~l~~li~aGvdv~RlN~SHg~~~~~~~~i~~ir~~~~~~~~~~~I~~Dl~gp~---------   71 (246)
T d1e0ta2           1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPA---------   71 (246)
T ss_dssp             CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCS---------
T ss_pred             CCCCeEEEeeCCCcCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCCCcccccccccc---------
Confidence            47999999999999999999999999999999999999999999999999999999999999999999963         


Q ss_pred             CcEEecCCCEEEEEeCCCCCCCccEEeecchhhhhccCCCCEEEEeCCeEEEEEEEEecCCCeEEEEEeeCeEecCCCcc
Q 012335           88 KPIQLVQGQEITISTDYSLKGDEKMISMSYKKLAEDLRPGSVILCSDGTISLTVLDCAKELGLVRCRCENSAVLGERKNV  167 (466)
Q Consensus        88 ~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~i~iddG~i~l~V~~v~~~~~~i~~~v~~gG~l~~~Kgv  167 (466)
                                                                                                      
T Consensus        72 --------------------------------------------------------------------------------   71 (246)
T d1e0ta2          72 --------------------------------------------------------------------------------   71 (246)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCCcccCCCCCChhcHHHHHhccCcCCCcEEEEcCCCChhhHHHHHHHHHhcC-CCceEEEeecCHHHHhcHHHHHhcC
Q 012335          168 NLPGVIVDLPTLTEKDKEDILNWGVPNKIDMIALSFVRKGSDLVEVRNLLRVHA-KNILLMSKVENLEGVANFDDVLANS  246 (466)
Q Consensus       168 nlp~~~~~lp~lte~D~~di~~~~~~~~~d~v~~sfV~sa~dv~~~r~~l~~~~-~~~~IiaKIE~~~av~nideI~~~s  246 (466)
                                 ||++|.+++ +||+++|+|||++||||+++||.++|+++.+.+ .+++||||||+++|++|+++|+++|
T Consensus        72 -----------ltekD~~~i-~~a~~~~vD~ialSFVr~~~Dv~~~r~~l~~~~~~~~~iiaKIE~~~al~nldeIi~~s  139 (246)
T d1e0ta2          72 -----------LAEKDKQDL-IFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEAS  139 (246)
T ss_dssp             -----------SCHHHHHHH-HHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHS
T ss_pred             -----------cccCcchhh-hHHHHcCCCEEEEcCCCCHHHHHHHHHHHHHhCCCCceEEEEecchhhhhchHHHHhhc
Confidence                       599999999 999999999999999999999999999998876 6899999999999999999999999


Q ss_pred             CeeEEeCCcccCcCCchhHHHHHHHHHHHHHHcCCCeEEeehhhHhhhcCCCCCHHHHHhHHHh-----------hhhhc
Q 012335          247 DAFMVARGDLGMEIPIEKIFLAQKVMIHKANIQGKPVVTATQMLESMIKSPRPTRAEATDVANA-----------AENFI  315 (466)
Q Consensus       247 DgImiaRgDLg~e~~~e~v~~~qk~ii~~~~~~gkPvi~ATqmLeSM~~~p~PTRAEvsDv~na-----------aE~~~  315 (466)
                      |||||||||||+|+|++++|.+||+|+.+|+++|||||+||||||||++||+|||||++||+||           +|++.
T Consensus       140 DgImIaRGDLg~ei~~e~vp~~Qk~ii~~~~~~~kpvi~ATq~LeSM~~~p~PTRAEv~Dv~nav~dG~D~vmLs~ETa~  219 (246)
T d1e0ta2         140 DGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAK  219 (246)
T ss_dssp             SEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC---
T ss_pred             ceEEEEccchhhhCCHHHHHHHHHHHHHHHHHhCCCEEEehhhhhhhhcCCCCchHHHHHHHHHHHhCCcEEEEcccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999           78888


Q ss_pred             cchhh
Q 012335          316 NYGDL  320 (466)
Q Consensus       316 ~~~~~  320 (466)
                      +.+|.
T Consensus       220 G~~P~  224 (246)
T d1e0ta2         220 GKYPL  224 (246)
T ss_dssp             ---CH
T ss_pred             CCCHH
Confidence            87663
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1pkla3 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal domain {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1a3xa3 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2g50a3 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1e0ta3 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e0ta1 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a3xa1 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2g50a1 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1pkla1 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1izca_ c.1.12.5 (A:) Macrophomate synthase {Macrophoma commelinae [TaxId: 108330]} Back     information, alignment and structure
>d1sgja_ c.1.12.5 (A:) Citrate lyase, beta subunit {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1u5ha_ c.1.12.5 (A:) Citrate lyase, beta subunit {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1kbla1 c.1.12.2 (A:510-873) Pyruvate phosphate dikinase, C-terminal domain {Clostridium symbiosum [TaxId: 1512]} Back     information, alignment and structure
>d1vbga1 c.1.12.2 (A:521-876) Pyruvate phosphate dikinase, C-terminal domain {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1h6za1 c.1.12.2 (A:538-903) Pyruvate phosphate dikinase, C-terminal domain {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1t57a_ c.49.1.2 (A:) Hypothetical protein MTH1675 {Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1vp8a_ c.49.1.2 (A:) Hypothetical protein AF0103 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1jqoa_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jqna_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure