Citrus Sinensis ID: 012386
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 465 | 2.2.26 [Sep-21-2011] | |||||||
| P93834 | 502 | Hexokinase-2 OS=Arabidops | yes | no | 0.997 | 0.924 | 0.744 | 0.0 | |
| Q42525 | 496 | Hexokinase-1 OS=Arabidops | no | no | 0.991 | 0.929 | 0.746 | 0.0 | |
| Q9SEK3 | 498 | Hexokinase-1 OS=Spinacia | N/A | no | 0.948 | 0.885 | 0.738 | 0.0 | |
| Q9SEK2 | 497 | Hexokinase-1 OS=Nicotiana | N/A | no | 0.991 | 0.927 | 0.692 | 0.0 | |
| Q9SQ76 | 496 | Hexokinase-2 OS=Solanum t | N/A | no | 0.946 | 0.887 | 0.706 | 0.0 | |
| Q2KNB9 | 494 | Hexokinase-2 OS=Oryza sat | yes | no | 0.950 | 0.894 | 0.697 | 0.0 | |
| Q8LQ68 | 506 | Hexokinase-6 OS=Oryza sat | yes | no | 0.909 | 0.835 | 0.648 | 1e-168 | |
| O64390 | 498 | Hexokinase-1 OS=Solanum t | N/A | no | 0.987 | 0.921 | 0.623 | 1e-165 | |
| Q5W676 | 507 | Hexokinase-5 OS=Oryza sat | no | no | 0.926 | 0.850 | 0.624 | 1e-165 | |
| Q2KNB7 | 502 | Hexokinase-9 OS=Oryza sat | no | no | 0.946 | 0.876 | 0.578 | 1e-161 |
| >sp|P93834|HXK2_ARATH Hexokinase-2 OS=Arabidopsis thaliana GN=HXK2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/497 (74%), Positives = 413/497 (83%), Gaps = 33/497 (6%)
Query: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
MGKV VA TVVC+ AVCAAAAL+VRRRMKS G+WAR + ILK EE C TPI KLRQVAD
Sbjct: 1 MGKVAVATTVVCSVAVCAAAALIVRRRMKSAGKWARVIEILKAFEEDCATPIAKLRQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AMTVEMHAGLASEGGSKLKMLISYVDNLP+GDE G FYALDLGGTNFRV+RV LGG+ R
Sbjct: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPSGDETGFFYALDLGGTNFRVMRVLLGGKHDR 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
VVK+EF+E SIPPHLMTG SHELFD+I LAKFVATEGE FH+ PGRQRELGFTFSFPV
Sbjct: 121 VVKREFKEESIPPHLMTGKSHELFDFIVDVLAKFVATEGEDFHLPPGRQRELGFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
+Q S++SG LI WTKGFSI+DTV +DVVGEL KAMER+GLDM VAALVNDTIGTLAGGRY
Sbjct: 181 KQLSLSSGTLINWTKGFSIDDTVDKDVVGELVKAMERVGLDMLVAALVNDTIGTLAGGRY 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM--------------------- 279
N D + AVILGTGTNAAYVERAHAIPKWHGLLPKSGEM
Sbjct: 241 TNPDVVVAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDH 300
Query: 280 ------------IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM 327
I EKIISGMYLGEI+RRVL +MAEEA FFGD VPPKLKIPFI+RTP+M
Sbjct: 301 SLDVDSLNPGEQILEKIISGMYLGEILRRVLLKMAEEAAFFGDIVPPKLKIPFIIRTPNM 360
Query: 328 SAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387
SAMH DTSPDL+VVG KLKDILE+ +SLKMRK+V+ LC+I+A+RGARLSAAGI GILKK
Sbjct: 361 SAMHSDTSPDLKVVGSKLKDILEVQTSSLKMRKVVISLCNIIASRGARLSAAGIYGILKK 420
Query: 388 LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGI 447
+GRD +DGE QKSVIA+DGGLFEHYT+FS M+S++KELLG+EVSE+V + SNDGSG+
Sbjct: 421 IGRDATKDGEAQKSVIAMDGGLFEHYTQFSESMKSSLKELLGDEVSESVEVILSNDGSGV 480
Query: 448 GAALLAASHSQYLEVEE 464
GAALLAASHSQYLE+E+
Sbjct: 481 GAALLAASHSQYLELED 497
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from mitochondrion to cytosol. Acts as sugar sensor which may regulate sugar-dependent gene repression or activation. Mediates the effects of sugar on plant growth and development independently of its catalytic activity or the sugar metabolism. May regulate the execution of program cell death in plant cells. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1 |
| >sp|Q42525|HXK1_ARATH Hexokinase-1 OS=Arabidopsis thaliana GN=HXK1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/494 (74%), Positives = 415/494 (84%), Gaps = 33/494 (6%)
Query: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
MGKV V ATVVC AAVCA A LVVRRRM+S+G+W R +AILK EE C TPI KLRQVAD
Sbjct: 1 MGKVAVGATVVCTAAVCAVAVLVVRRRMQSSGKWGRVLAILKAFEEDCATPISKLRQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AMTVEMHAGLAS+GGSKLKMLISYVDNLP+GDEKGLFYALDLGGTNFRV+RV LGG++ R
Sbjct: 61 AMTVEMHAGLASDGGSKLKMLISYVDNLPSGDEKGLFYALDLGGTNFRVMRVLLGGKQER 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
VVKQEFEEVSIPPHLMTG S ELF++IA ALAKFVATE E FH+ GRQRELGFTFSFPV
Sbjct: 121 VVKQEFEEVSIPPHLMTGGSDELFNFIAEALAKFVATECEDFHLPEGRQRELGFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
+QTS++SG LIKWTKGFSIE+ VG+DVVG L KA+ER+GLDMR+AALVNDT+GTLAGGRY
Sbjct: 181 KQTSLSSGSLIKWTKGFSIEEAVGQDVVGALNKALERVGLDMRIAALVNDTVGTLAGGRY 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM--------------------- 279
+N D +AAVILGTGTNAAYVERA AIPKWHGLLPKSGEM
Sbjct: 241 YNPDVVAAVILGTGTNAAYVERATAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEFDH 300
Query: 280 ------------IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM 327
I EKIISGMYLGEI+RRVL +MAE+A FFGDTVP KL+IPFI+RTPHM
Sbjct: 301 TLDFESLNPGEQILEKIISGMYLGEILRRVLLKMAEDAAFFGDTVPSKLRIPFIIRTPHM 360
Query: 328 SAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387
SAMH+DTSPDL++VG K+KDILE+ TSLKMRK+V+ LC+I+ATRGARLSAAGI GILKK
Sbjct: 361 SAMHNDTSPDLKIVGSKIKDILEVPTTSLKMRKVVISLCNIIATRGARLSAAGIYGILKK 420
Query: 388 LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGI 447
LGRDT +D E QKSVIA+DGGLFEHYT+FS CM+S++KELLG+E S +V + HSNDGSGI
Sbjct: 421 LGRDTTKDEEVQKSVIAMDGGLFEHYTQFSECMESSLKELLGDEASGSVEVTHSNDGSGI 480
Query: 448 GAALLAASHSQYLE 461
GAALLAASHS YLE
Sbjct: 481 GAALLAASHSLYLE 494
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from mitochondrion to cytosol. Acts as sugar sensor which may regulate sugar-dependent gene repression or activation. Mediates the effects of sugar on plant growth and development independently of its catalytic activity or the sugar metabolism. May regulate the execution of program cell death in plant cells. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q9SEK3|HXK1_SPIOL Hexokinase-1 OS=Spinacia oleracea GN=HXK1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/474 (73%), Positives = 398/474 (83%), Gaps = 33/474 (6%)
Query: 25 RRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISY 84
R+RMKS+ +W R +AILKE+++ CGTP+GKLRQVADAMTVEMHAGLASEG SKLKMLISY
Sbjct: 25 RQRMKSSSKWGRVMAILKELDDNCGTPLGKLRQVADAMTVEMHAGLASEGASKLKMLISY 84
Query: 85 VDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELF 144
VDNLPTGDE GLFYALDLGGTNFRVLRV+LGG+E RVV+QEF+EVSIPP LM G+S +LF
Sbjct: 85 VDNLPTGDEHGLFYALDLGGTNFRVLRVKLGGKEKRVVEQEFDEVSIPPELMVGTSEQLF 144
Query: 145 DYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVG 204
DYIA ALAKFVATE EG H P +QRELGFTFSFPV+QTSIASG LI+WTKGF+IEDTVG
Sbjct: 145 DYIAEALAKFVATESEGLHPEPNKQRELGFTFSFPVKQTSIASGTLIRWTKGFNIEDTVG 204
Query: 205 EDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAH 264
EDVV ELTKAM R G+DMRV ALVNDT+GTLAGGRY+ +D IAAVILGTGTNAAYVERA
Sbjct: 205 EDVVAELTKAMLRKGVDMRVTALVNDTVGTLAGGRYYKEDVIAAVILGTGTNAAYVERAS 264
Query: 265 AIPKWHGLLPKSGEM---------------------------------IFEKIISGMYLG 291
AI KWHG LPKSGEM IFEK+ISGMYLG
Sbjct: 265 AIHKWHGPLPKSGEMVINMEWGNFRSSYLPLTEYDIALDEESLNPGEQIFEKMISGMYLG 324
Query: 292 EIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEI 351
EIVRRVL RMA+EA+ FGDTVP KLK PFILRTP MSAMHHDTSPDL+VV KLKD+L I
Sbjct: 325 EIVRRVLYRMADEASLFGDTVPSKLKTPFILRTPDMSAMHHDTSPDLKVVASKLKDVLGI 384
Query: 352 SNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFE 411
N+SLK+RK++V++CD++A+RGA +SAAGI+GI+KKLGRDT++ GE QKSVIALDGGLFE
Sbjct: 385 PNSSLKVRKIIVDVCDVIASRGACISAAGILGIIKKLGRDTLKQGENQKSVIALDGGLFE 444
Query: 412 HYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYLEVEES 465
HY KF CM+ ++KELLG+EV+ET+VIEHSNDGSGIGAALLAASHSQYLE +ES
Sbjct: 445 HYAKFRECMEDSLKELLGDEVAETIVIEHSNDGSGIGAALLAASHSQYLEEDES 498
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Seems not to be involved in cell sugar sensing. Spinacia oleracea (taxid: 3562) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q9SEK2|HXK1_TOBAC Hexokinase-1 OS=Nicotiana tabacum GN=HXK1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/494 (69%), Positives = 398/494 (80%), Gaps = 33/494 (6%)
Query: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
M K TV A V+ AA VCA AAL+V RM+ + +WARA+AIL+E EEKCGTP KL+QVAD
Sbjct: 1 MKKATVGAAVIGAATVCAVAALIVNHRMRKSSKWARAMAILREFEEKCGTPDAKLKQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AMTVEMHAGLASEGGSKLKMLI+YVDNLPTGDE G+FYALDLGGTNFRVLRVQLGG++G
Sbjct: 61 AMTVEMHAGLASEGGSKLKMLITYVDNLPTGDEAGVFYALDLGGTNFRVLRVQLGGKDGG 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
+V QEF E SIPP+LM G+S LFDYIAA LAKFV EGE F PG+QRELGFTFSFPV
Sbjct: 121 IVHQEFAEASIPPNLMVGTSEALFDYIAAELAKFVNEEGEKFQQPPGKQRELGFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
QTSI SG +++WTKGFSI+D VG+DVVGEL KAM+R G+DMRV+ALVNDT+GTLAGG+Y
Sbjct: 181 MQTSINSGTIMRWTKGFSIDDAVGQDVVGELAKAMKRKGVDMRVSALVNDTVGTLAGGKY 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM--------------------- 279
+ D AVILGTGTNAAYVER AIPKWHG +PKSGEM
Sbjct: 241 THNDVAVAVILGTGTNAAYVERVQAIPKWHGPVPKSGEMVINMEWGNFRSSHLPLTQYDH 300
Query: 280 ------------IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM 327
IFEK+ SGMYLGEI+RRVL R+AEEA FGD VPPKLK PF+LRTP M
Sbjct: 301 ALDTNSLNPGDQIFEKMTSGMYLGEILRRVLLRVAEEAGIFGDEVPPKLKSPFVLRTPDM 360
Query: 328 SAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387
SAMHHD S DLRVVG KLKDILEISNTSLK R+LV+ELC+IVATRGARL+AAG++GILKK
Sbjct: 361 SAMHHDASSDLRVVGDKLKDILEISNTSLKTRRLVIELCNIVATRGARLAAAGVLGILKK 420
Query: 388 LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGI 447
+GRDT R G +K+V+A+DGGL+EHYT++ C+++T+KELLG+E++ ++V EHSNDGSGI
Sbjct: 421 MGRDTPRQGGLEKTVVAMDGGLYEHYTEYRMCLENTLKELLGDELATSIVFEHSNDGSGI 480
Query: 448 GAALLAASHSQYLE 461
GAALLAAS+S YLE
Sbjct: 481 GAALLAASNSMYLE 494
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Nicotiana tabacum (taxid: 4097) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q9SQ76|HXK2_SOLTU Hexokinase-2 OS=Solanum tuberosum GN=HXK2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/473 (70%), Positives = 386/473 (81%), Gaps = 33/473 (6%)
Query: 22 LVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKML 81
L++R RM + +WARA AILKE EEKC TP GKL+QVADAMTVEMHAGLASEGGSKLKML
Sbjct: 22 LIMRHRMGKSSKWARARAILKEFEEKCATPDGKLKQVADAMTVEMHAGLASEGGSKLKML 81
Query: 82 ISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSH 141
ISYVDNLPTGDE G+FYALDLGGTNFRVLRVQLGG++G ++ QEF E SIPP+LM G+S
Sbjct: 82 ISYVDNLPTGDEGGVFYALDLGGTNFRVLRVQLGGKDGGIIHQEFAEASIPPNLMVGTSE 141
Query: 142 ELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIED 201
LFDYIAA LAKFVA EGE FH PGRQRELGFTFSFP+ QTSI SG LI+WTKGFSI+D
Sbjct: 142 ALFDYIAAELAKFVAEEGEEFHPPPGRQRELGFTFSFPIMQTSINSGTLIRWTKGFSIDD 201
Query: 202 TVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVE 261
TVG+DVV ELTKAM++ +DMRV+ALVNDT+GTLAGGR+ NKD AVILGTGTNAAYVE
Sbjct: 202 TVGKDVVAELTKAMQKREIDMRVSALVNDTVGTLAGGRFTNKDVSIAVILGTGTNAAYVE 261
Query: 262 RAHAIPKWHGLLPKSGEM---------------------------------IFEKIISGM 288
RA AIPKWHG LPKSGEM IFEKI SGM
Sbjct: 262 RAQAIPKWHGPLPKSGEMVINMEWGNFRSSHLPLTEYDHAMDTNSLNPGEQIFEKICSGM 321
Query: 289 YLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDI 348
YLGEI+RRVL RMAEEA FG+ VPPKLK FILRTP MSAMHHDTS DLRVVG KLKDI
Sbjct: 322 YLGEILRRVLLRMAEEAGIFGEEVPPKLKNSFILRTPEMSAMHHDTSSDLRVVGDKLKDI 381
Query: 349 LEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGG 408
LEISN+SLK R+LVVELC+IVATRGARL+AAGI+GI+KK+G+DT R+ +K V+A+DGG
Sbjct: 382 LEISNSSLKTRRLVVELCNIVATRGARLAAAGILGIIKKMGKDTPRESGPEKIVVAMDGG 441
Query: 409 LFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYLE 461
L+EHYT++S C+++T+ ELLG+E++ ++V +H+NDGSGIGAALLAAS+S Y+E
Sbjct: 442 LYEHYTEYSKCLENTLVELLGKEMATSIVFKHANDGSGIGAALLAASNSVYVE 494
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Seems neither to be involved in cell sugar sensing nor in carbohydrate metabolism in tuber. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q2KNB9|HXK2_ORYSJ Hexokinase-2 OS=Oryza sativa subsp. japonica GN=HXK2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/476 (69%), Positives = 395/476 (82%), Gaps = 34/476 (7%)
Query: 22 LVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKML 81
L+VRR+++ RW RA A+L+E+EE+C P G+LRQVADAM VEMHAGLASEGGSKLKM+
Sbjct: 19 LLVRRQLREAKRWGRADAVLRELEERCAAPPGRLRQVADAMAVEMHAGLASEGGSKLKMI 78
Query: 82 ISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSH 141
ISYVD LP+G+EKG+FYALDLGGTNFRVLRVQLGG+EGRV+KQE +E+SIPPHLMTG S+
Sbjct: 79 ISYVDALPSGEEKGVFYALDLGGTNFRVLRVQLGGKEGRVIKQEHDEISIPPHLMTGGSN 138
Query: 142 ELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIED 201
ELFD+IA++LAKFVA+EGE FH++ GRQRELGFTFSFPV+QTSIASG LI WTKGFSI++
Sbjct: 139 ELFDFIASSLAKFVASEGEDFHLAEGRQRELGFTFSFPVKQTSIASGTLINWTKGFSIDE 198
Query: 202 TVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVE 261
TVGEDVV ELTKA+ER GLDM+V AL+NDTIGTLAGGRY + D IAAVILGTGTNAAYVE
Sbjct: 199 TVGEDVVTELTKALERQGLDMKVTALINDTIGTLAGGRYDDNDVIAAVILGTGTNAAYVE 258
Query: 262 RAHAIPKWHGLLPKSGEM---------------------------------IFEKIISGM 288
RA+AIPKWH LLPKSG+M ++EK+ISGM
Sbjct: 259 RANAIPKWHDLLPKSGDMVINMEWGNFRSSHLPLTEFDQALDAESLNPGEQVYEKLISGM 318
Query: 289 YLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDI 348
YLGEIVRRVL +MAEEA+ FGD VPPKLKIPFI+RTP+MS MH D SPDLR VG KLKDI
Sbjct: 319 YLGEIVRRVLLKMAEEASLFGDEVPPKLKIPFIIRTPYMSMMHCDRSPDLRTVGAKLKDI 378
Query: 349 LEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGG 408
L + NTSLK R+LVV++CDIVA R A L+AAGI GILKKLGRD V + +KQ++VIA+DGG
Sbjct: 379 LGVQNTSLKTRRLVVDVCDIVAKRAAHLAAAGIHGILKKLGRD-VPNTDKQRTVIAVDGG 437
Query: 409 LFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYLEVEE 464
L+EHYT F+ C++ST++++LGE+VS T+VI+ + DGSGIGAALLAA+HSQY E EE
Sbjct: 438 LYEHYTIFAECVESTLRDMLGEDVSSTIVIKLAKDGSGIGAALLAAAHSQYREAEE 493
|
Fructose and glucose phosphorylating enzyme. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q8LQ68|HXK6_ORYSJ Hexokinase-6 OS=Oryza sativa subsp. japonica GN=HXK6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 592 bits (1525), Expect = e-168, Method: Compositional matrix adjust.
Identities = 297/458 (64%), Positives = 354/458 (77%), Gaps = 35/458 (7%)
Query: 41 LKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYAL 100
++E+E++ TP LR +ADAM EM GL ++ + LKMLISYVDNLPTGDE GLFYAL
Sbjct: 49 IEEVEQRFSTPTALLRGIADAMVEEMERGLRADPHAPLKMLISYVDNLPTGDEHGLFYAL 108
Query: 101 DLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGE 160
DLGGTNFRV+RVQLGGRE RVV Q++EEV+IPPHLM G+S ELFD+IAA L FV TEGE
Sbjct: 109 DLGGTNFRVIRVQLGGREKRVVSQQYEEVAIPPHLMVGTSMELFDFIAAELESFVKTEGE 168
Query: 161 GFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGL 220
FH+ GRQRELGFTFSFPV QTSI+SG LIKWTKGFSI TVGEDVV EL++AMER GL
Sbjct: 169 DFHLPEGRQRELGFTFSFPVHQTSISSGTLIKWTKGFSINGTVGEDVVAELSRAMERQGL 228
Query: 221 DMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM- 279
DM+V ALVNDT+GTLAGGRY + D AAVILGTGTNAAYVE A+AIPKW GLLP+SG M
Sbjct: 229 DMKVTALVNDTVGTLAGGRYVDNDVAAAVILGTGTNAAYVEHANAIPKWTGLLPRSGNMV 288
Query: 280 --------------------------------IFEKIISGMYLGEIVRRVLCRMAEEANF 307
I+EK+ISGMYLGEIVRR+L ++A +A+
Sbjct: 289 INMEWGNFKSERLPRSDYDNALDFESLNPGEQIYEKMISGMYLGEIVRRILLKLAHDASL 348
Query: 308 FGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCD 367
FGD VP KL+ FILRTP MSAMHHDTS DL+ +G KLKDIL +++TSL+ R + + +CD
Sbjct: 349 FGDVVPTKLEQRFILRTPDMSAMHHDTSHDLKHLGAKLKDILGVADTSLEARYITLHVCD 408
Query: 368 IVATRGARLSAAGIVGILKKLGRDTV-RDG-EKQKSVIALDGGLFEHYTKFSACMQSTVK 425
+VA RGARL+AAGI GILKKLGRD V DG +KQ++VIALDGGL+EHY KF C+++T+
Sbjct: 409 LVAERGARLAAAGIYGILKKLGRDRVPSDGSQKQRTVIALDGGLYEHYKKFRTCLEATLA 468
Query: 426 ELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYLEVE 463
+LLGEE + +VV++ +NDGSGIGAALLAASHSQY VE
Sbjct: 469 DLLGEEAASSVVVKLANDGSGIGAALLAASHSQYASVE 506
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|O64390|HXK1_SOLTU Hexokinase-1 OS=Solanum tuberosum GN=HXK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 582 bits (1499), Expect = e-165, Method: Compositional matrix adjust.
Identities = 310/497 (62%), Positives = 367/497 (73%), Gaps = 38/497 (7%)
Query: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
M KVTV A VV AAAVCA AAL+V RM+ + +W RA+AIL+E EEKC T KL+QVAD
Sbjct: 1 MKKVTVGAAVVGAAAVCAVAALIVNHRMRKSSKWGRAMAILREFEEKCKTQDAKLKQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKML--ISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGRE 118
AMTVEMHAGLASEGG + L +S + L + G+FYALDLGGTNFRVLRVQLGG++
Sbjct: 61 AMTVEMHAGLASEGGQSSRCLSPMSIISQLVM--KLGVFYALDLGGTNFRVLRVQLGGKD 118
Query: 119 GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSF 178
G ++ QEF E SIPP LM G+S LFDYIAA LAKFVA E E FH PG+QRELGF
Sbjct: 119 GGIIHQEFAEASIPPSLMVGTSDALFDYIAAELAKFVAAEEEKFHQPPGKQRELGFHLLI 178
Query: 179 PVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGG 238
P SG +++WTKGFSI+D VG+DVVGELTKAM+ LDMRV+ALVNDT+GTLAGG
Sbjct: 179 PSNADFNNSGTIMRWTKGFSIDDAVGQDVVGELTKAMKEKVLDMRVSALVNDTVGTLAGG 238
Query: 239 RYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM------------------- 279
+Y KD AVILGTGTNAAYVER AIPKWHG +PKSGEM
Sbjct: 239 KYTQKDVAVAVILGTGTNAAYVERVQAIPKWHGPVPKSGEMVINMEWGNFRSSHLPLTEY 298
Query: 280 --------------IFEKIISGMYLGEIVRRVLCRMAEEA-NFFGDTVPPKLKIPFILRT 324
IFEK+ SGMYLGEI+RRVL R+AEE F LK F+LRT
Sbjct: 299 DHALDNESLNPAEQIFEKMTSGMYLGEILRRVLTRVAEEVLAFLAMRSLQSLKDSFVLRT 358
Query: 325 PHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGI 384
P MSAMHHDTSPDL+VVG+KLKDILEISNTSLK RKLV+ LC+IVATRGARL AAG++GI
Sbjct: 359 PDMSAMHHDTSPDLKVVGEKLKDILEISNTSLKTRKLVLSLCNIVATRGARLDAAGVLGI 418
Query: 385 LKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDG 444
LKK+GRDT + G +++VIA+DGGL+EHYT++ C+++++K+LLGEE++ ++V HSNDG
Sbjct: 419 LKKMGRDTPKQGGSERTVIAMDGGLYEHYTEYRMCLENSLKDLLGEELATSIVFVHSNDG 478
Query: 445 SGIGAALLAASHSQYLE 461
SGIGAALL ASHS YLE
Sbjct: 479 SGIGAALLRASHSMYLE 495
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Seems neither to be involved in cell sugar sensing nor in carbohydrate metabolism in tuber. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q5W676|HXK5_ORYSJ Hexokinase-5 OS=Oryza sativa subsp. japonica GN=HXK5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 581 bits (1497), Expect = e-165, Method: Compositional matrix adjust.
Identities = 291/466 (62%), Positives = 360/466 (77%), Gaps = 35/466 (7%)
Query: 33 RWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGD 92
R + A+++++E TP LR ++DAM EM GL + + +KMLI+YVDNLPTG+
Sbjct: 42 RKRKVAAVIEDVEHALSTPTALLRGISDAMVTEMERGLRGDSHAMVKMLITYVDNLPTGN 101
Query: 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALA 152
E+GLFYALDLGGTNFRVLRVQLGG+E RVV+Q++EEVSIPPHLM G+S ELFD+IA+AL+
Sbjct: 102 EQGLFYALDLGGTNFRVLRVQLGGKEKRVVQQQYEEVSIPPHLMVGTSMELFDFIASALS 161
Query: 153 KFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELT 212
KFV TEG+ FH+ GRQRELGFTFSFPV QTSI+SG LIKWTKGFSI D VGEDVV EL
Sbjct: 162 KFVDTEGDDFHLPEGRQRELGFTFSFPVSQTSISSGTLIKWTKGFSINDAVGEDVVSELG 221
Query: 213 KAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGL 272
KAMER GLDM++AALVNDT+GTLAGGRY + +AA+ILGTGTNAAYVE A+AIPKW GL
Sbjct: 222 KAMERQGLDMKIAALVNDTVGTLAGGRYADNSVVAAIILGTGTNAAYVENANAIPKWTGL 281
Query: 273 LPKSGEM---------------------------------IFEKIISGMYLGEIVRRVLC 299
LP+SG M I+EK+ISGMYLGEIVRR+L
Sbjct: 282 LPRSGNMVINTEWGSFKSDKLPLSEFDKAMDFESLNPGEQIYEKLISGMYLGEIVRRILL 341
Query: 300 RMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMR 359
++A +A FGD VP KL+ PF+LRTP MSAMHHD+S DL+ VG KLKDI+ + +TSL++R
Sbjct: 342 KLAHDAALFGDVVPSKLEQPFVLRTPDMSAMHHDSSHDLKTVGAKLKDIVGVPDTSLEVR 401
Query: 360 KLVVELCDIVATRGARLSAAGIVGILKKLGRDTV-RDGEKQ-KSVIALDGGLFEHYTKFS 417
+ +CDIVA R ARL+AAGI G+LKKLGRD + +DG K ++VIALDGGL+EHY KFS
Sbjct: 402 YITSHICDIVAERAARLAAAGIYGVLKKLGRDKMPKDGSKMPRTVIALDGGLYEHYKKFS 461
Query: 418 ACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYLEVE 463
+C++ST+ +LLG++VS +VV + +NDGSGIGAALLAASHSQY E++
Sbjct: 462 SCLESTLTDLLGDDVSSSVVTKLANDGSGIGAALLAASHSQYAEID 507
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q2KNB7|HXK9_ORYSJ Hexokinase-9 OS=Oryza sativa subsp. japonica GN=HXK9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 568 bits (1465), Expect = e-161, Method: Compositional matrix adjust.
Identities = 275/475 (57%), Positives = 358/475 (75%), Gaps = 35/475 (7%)
Query: 25 RRRMKSTGRWARAVAIL-KEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLIS 83
+R+ ++ R RA A+L ++++E+C P+ LRQVADAM EM AGLA+EGGS L+ML++
Sbjct: 26 QRQRRAAKRSERAEAVLLRDLQERCAAPVELLRQVADAMAAEMRAGLAAEGGSDLQMLVT 85
Query: 84 YVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHEL 143
YVD+LP+G EKG+FYALDLGGTNFRVLRVQLGG+E R++KQ+ E +SIP HLM+ SSHEL
Sbjct: 86 YVDSLPSGGEKGMFYALDLGGTNFRVLRVQLGGKERRIIKQDSEGISIPQHLMSSSSHEL 145
Query: 144 FDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTV 203
FD++A ALAKFVA+EGE H+ G QRELGFTFSFPV+Q S+ASG LIKWTK F+I++ V
Sbjct: 146 FDFVAVALAKFVASEGEDCHLPEGTQRELGFTFSFPVKQKSLASGTLIKWTKSFAIDEMV 205
Query: 204 GEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERA 263
G+DVV EL A+ GLDM+V ALVNDT+GTLA GRY N D IAAVILGTG+NAAY++ A
Sbjct: 206 GKDVVAELNMAIRSQGLDMKVTALVNDTVGTLAAGRYVNHDTIAAVILGTGSNAAYIDHA 265
Query: 264 HAIPKWHGLLPKSGEM---------------------------------IFEKIISGMYL 290
AIPKWHG LPKSG M ++EK ISGMY+
Sbjct: 266 DAIPKWHGSLPKSGNMVINMEWGNFKSSHLPLTEFDQELDAESLNPGKQVYEKSISGMYM 325
Query: 291 GEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILE 350
GE+VRR+L +MA+E FGD +PPKL+ P+ILRT M MHHDTS DLR V KLK++L
Sbjct: 326 GELVRRILLKMAQETRIFGDNIPPKLERPYILRTLDMLIMHHDTSSDLRTVANKLKEVLG 385
Query: 351 ISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLF 410
I TS RKLV+++C+ +ATRGARL+AAGI GI++KLG+ + ++SVIA+DGG++
Sbjct: 386 IEYTSFTTRKLVLDVCEAIATRGARLAAAGIYGIIQKLGQHS-DSPSTRRSVIAVDGGVY 444
Query: 411 EHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYLEVEES 465
++YT FS CM+ST+ ++LG+E++ +V+I+H NDGSG+GAALLAAS+SQY + E +
Sbjct: 445 KYYTFFSQCMESTLSDMLGQELAPSVMIKHVNDGSGVGAALLAASYSQYHQAESA 499
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 465 | ||||||
| 11066213 | 498 | hexokinase [Citrus sinensis] | 1.0 | 0.933 | 0.933 | 0.0 | |
| 225445080 | 497 | PREDICTED: hexokinase-1-like [Vitis vini | 0.991 | 0.927 | 0.803 | 0.0 | |
| 339756001 | 470 | HXK1 [Vitis vinifera] | 0.933 | 0.923 | 0.811 | 0.0 | |
| 449446528 | 498 | PREDICTED: hexokinase-1-like [Cucumis sa | 0.997 | 0.931 | 0.808 | 0.0 | |
| 147860824 | 498 | hypothetical protein VITISV_024177 [Viti | 0.991 | 0.925 | 0.8 | 0.0 | |
| 209978718 | 498 | hexokinase 1 [Cucumis melo] | 0.997 | 0.931 | 0.802 | 0.0 | |
| 224143653 | 498 | predicted protein [Populus trichocarpa] | 1.0 | 0.933 | 0.813 | 0.0 | |
| 255546323 | 498 | hexokinase, putative [Ricinus communis] | 0.997 | 0.931 | 0.792 | 0.0 | |
| 356523741 | 498 | PREDICTED: hexokinase-1-like [Glycine ma | 1.0 | 0.933 | 0.787 | 0.0 | |
| 356513171 | 498 | PREDICTED: hexokinase-1-like [Glycine ma | 1.0 | 0.933 | 0.783 | 0.0 |
| >gi|11066213|gb|AAG28503.1|AF196966_1 hexokinase [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/498 (93%), Positives = 465/498 (93%), Gaps = 33/498 (6%)
Query: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD
Sbjct: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR
Sbjct: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV
Sbjct: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY
Sbjct: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM--------------------- 279
HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM
Sbjct: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDE 300
Query: 280 ------------IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM 327
IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM
Sbjct: 301 ALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM 360
Query: 328 SAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387
SAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK
Sbjct: 361 SAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 420
Query: 388 LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGI 447
LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGI
Sbjct: 421 LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGI 480
Query: 448 GAALLAASHSQYLEVEES 465
GAALLAASHSQYLEVEES
Sbjct: 481 GAALLAASHSQYLEVEES 498
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225445080|ref|XP_002283608.1| PREDICTED: hexokinase-1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/494 (80%), Positives = 433/494 (87%), Gaps = 33/494 (6%)
Query: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
MGKV V A VVCAA VCAAA L+ R RM+S+GRWARA+AIL+E EEKCGTPI KLRQVAD
Sbjct: 1 MGKVAVGAAVVCAATVCAAAVLIARHRMRSSGRWARAMAILREFEEKCGTPIAKLRQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AMTVEMHAGLASEGGSKLKM+ISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGG++ R
Sbjct: 61 AMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGKDKR 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
VVKQEFEEVSIPPHLM GSS LFDYIAAALAKFVATEGEG HVSPGRQRELGFTFSFPV
Sbjct: 121 VVKQEFEEVSIPPHLMVGSSDALFDYIAAALAKFVATEGEGLHVSPGRQRELGFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
RQ+SI+SG LIKWTKGFSIED VG+DVVGELTKAMERIGLDMRV+ALVNDTIGTLAGGRY
Sbjct: 181 RQSSISSGSLIKWTKGFSIEDAVGQDVVGELTKAMERIGLDMRVSALVNDTIGTLAGGRY 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM--------------------- 279
+++D +AAVILGTGTNAAYVERA +IPKWHGLLPKSG+M
Sbjct: 241 YDQDVVAAVILGTGTNAAYVERAQSIPKWHGLLPKSGDMVINMEWGNFRSSHLPLTEYDQ 300
Query: 280 ------------IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM 327
IFEKIISGMYLG+IVRRVLCRMAEEA+ FGDTVPPKLKIPFILRTP M
Sbjct: 301 VLDAESLNPGEQIFEKIISGMYLGDIVRRVLCRMAEEADLFGDTVPPKLKIPFILRTPDM 360
Query: 328 SAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387
SAMHHDTSPDLRVVG KLKDIL+I NTSLK RK+V+ELCDIVATRGARLSAAGI+GILKK
Sbjct: 361 SAMHHDTSPDLRVVGSKLKDILDIPNTSLKTRKVVIELCDIVATRGARLSAAGILGILKK 420
Query: 388 LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGI 447
LGRDT+++G+KQ SVIALDGGL+EHYT+F C++ST+KELLG EVS+ +VI+HSNDGSGI
Sbjct: 421 LGRDTMKEGDKQNSVIALDGGLYEHYTEFRTCLESTLKELLGAEVSDNIVIKHSNDGSGI 480
Query: 448 GAALLAASHSQYLE 461
GAALLAASHSQYLE
Sbjct: 481 GAALLAASHSQYLE 494
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|339756001|gb|AEJ95926.1| HXK1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/467 (81%), Positives = 413/467 (88%), Gaps = 33/467 (7%)
Query: 28 MKSTGRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDN 87
M+S+GRWARA+AIL+E EEKCGTPI KLRQVADAMTVEMHAGLASEGGSKLKM+ISYVDN
Sbjct: 1 MRSSGRWARAMAILREFEEKCGTPIAKLRQVADAMTVEMHAGLASEGGSKLKMIISYVDN 60
Query: 88 LPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYI 147
LPTGDEKGLFYALDLGGTNFRVLRVQLGG++ RVVKQEFEEVSIPPHLM GSS LFDYI
Sbjct: 61 LPTGDEKGLFYALDLGGTNFRVLRVQLGGKDKRVVKQEFEEVSIPPHLMVGSSDALFDYI 120
Query: 148 AAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDV 207
AAALAKFVATEGEG HVSPGRQRELGFTFSFPVRQ+SIASG LIKWTKGFSIED VG+DV
Sbjct: 121 AAALAKFVATEGEGLHVSPGRQRELGFTFSFPVRQSSIASGSLIKWTKGFSIEDAVGQDV 180
Query: 208 VGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIP 267
VGELTKAMERIGLDMRV+ALVNDTIGTLAGGRY+++D +AAVILGTGTNAAYVERA +IP
Sbjct: 181 VGELTKAMERIGLDMRVSALVNDTIGTLAGGRYYDQDVVAAVILGTGTNAAYVERAQSIP 240
Query: 268 KWHGLLPKSGEM---------------------------------IFEKIISGMYLGEIV 294
KWHGLLPKSG+M IFEKIISGMYLG+IV
Sbjct: 241 KWHGLLPKSGDMVINMEWGNFRSSHLPLTEYDQVLDAESLNPGEQIFEKIISGMYLGDIV 300
Query: 295 RRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNT 354
RRVLCRMAEEA+ FGDTVPPKLKIPFILRTP MSAMHHDTSPDLRVVG KLKDIL+I NT
Sbjct: 301 RRVLCRMAEEADLFGDTVPPKLKIPFILRTPDMSAMHHDTSPDLRVVGSKLKDILDIPNT 360
Query: 355 SLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYT 414
SLK RK+V+ELCDIVATRGARLSAAGI+GILKKLGRDT+++G+KQ SVIALDGGL+EHYT
Sbjct: 361 SLKTRKVVIELCDIVATRGARLSAAGILGILKKLGRDTMKEGDKQNSVIALDGGLYEHYT 420
Query: 415 KFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYLE 461
+F C++ST+KELLG EVS+ +VI+HSNDGSGIGAALLAASHSQYLE
Sbjct: 421 EFRTCLESTLKELLGAEVSDNIVIKHSNDGSGIGAALLAASHSQYLE 467
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449446528|ref|XP_004141023.1| PREDICTED: hexokinase-1-like [Cucumis sativus] gi|449487967|ref|XP_004157890.1| PREDICTED: hexokinase-1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/497 (80%), Positives = 433/497 (87%), Gaps = 33/497 (6%)
Query: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
MGKV V A VVCAAAVCAAAALVVR RM+++G+WARA+AIL+E E+KCGTPIGKLRQVAD
Sbjct: 1 MGKVAVGAAVVCAAAVCAAAALVVRHRMRNSGKWARAMAILREFEDKCGTPIGKLRQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGG+E R
Sbjct: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGKENR 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
VVKQEFEEVSIPPHLM GSS LFD+IA ALAKFVA EGEGFH +PGRQRELGFTFSFPV
Sbjct: 121 VVKQEFEEVSIPPHLMVGSSEALFDFIAQALAKFVAEEGEGFHPAPGRQRELGFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
RQTSI+SG LIKWTKGFSIEDTVGEDVVGELTKAME++ LDMRV ALVNDTIGTLAGGRY
Sbjct: 181 RQTSISSGTLIKWTKGFSIEDTVGEDVVGELTKAMEKLKLDMRVTALVNDTIGTLAGGRY 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM--------------------- 279
H+ D IAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM
Sbjct: 241 HDNDVIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLSLTEYDH 300
Query: 280 ------------IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM 327
IFEK+ISGMYLGEIVR+VL +MAEEA FGDTVPPKLKIPFILRTPH
Sbjct: 301 ALDAESLNPGEQIFEKLISGMYLGEIVRKVLVKMAEEAAIFGDTVPPKLKIPFILRTPHT 360
Query: 328 SAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387
SAMHHDTSPDL+VV KLKD+LEISNTSLK RK++VELCD+VATRGARLSAAGI+GILKK
Sbjct: 361 SAMHHDTSPDLKVVASKLKDVLEISNTSLKTRKIIVELCDVVATRGARLSAAGILGILKK 420
Query: 388 LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGI 447
LGRDTVR GEKQKSV+ALDGGL+EHYTKF M++T+KELLG+EV+ V +EHSNDGSGI
Sbjct: 421 LGRDTVRVGEKQKSVVALDGGLYEHYTKFRTTMENTLKELLGDEVAANVFVEHSNDGSGI 480
Query: 448 GAALLAASHSQYLEVEE 464
GAALLAASHSQYLEVEE
Sbjct: 481 GAALLAASHSQYLEVEE 497
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147860824|emb|CAN83149.1| hypothetical protein VITISV_024177 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/495 (80%), Positives = 432/495 (87%), Gaps = 34/495 (6%)
Query: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
MGKV V A VVCAA VCAAA L+ R RM+S+GRWARA+AIL+E EEKCGTPI KLRQVAD
Sbjct: 1 MGKVAVGAAVVCAATVCAAAVLIARHRMRSSGRWARAMAILREFEEKCGTPIAKLRQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AMTVEMHAGLASEGGSKLKM+ISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGG++ R
Sbjct: 61 AMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGKDKR 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
VVKQEFEEVSIPPHLM GSS LFDYIAAALAKFVATEGEG HVSPGRQRELGFTFSFPV
Sbjct: 121 VVKQEFEEVSIPPHLMVGSSDALFDYIAAALAKFVATEGEGLHVSPGRQRELGFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
RQ+SI+SG LIKWTKGFSIED VG+DVVGELTKAMERIGLDM V+ALVNDTIGTLAGGRY
Sbjct: 181 RQSSISSGSLIKWTKGFSIEDAVGQDVVGELTKAMERIGLDMXVSALVNDTIGTLAGGRY 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM--------------------- 279
+++D +AAVILGTGTNAAYVERA +IPKWHGLLPKSG+M
Sbjct: 241 YDQDVVAAVILGTGTNAAYVERAQSIPKWHGLLPKSGDMVINMEWGNFRSSHLPLTEYDQ 300
Query: 280 ------------IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM 327
IFEKIISGMYLG+IVRRVLCRMAEEA+ FGDTVPPKLKIPFILRTP M
Sbjct: 301 VLDAESLNPGEQIFEKIISGMYLGDIVRRVLCRMAEEADLFGDTVPPKLKIPFILRTPDM 360
Query: 328 SAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387
SAMHHDTSPDLRVVG KLKDIL+I NTSLK RK+V+ELCDIVATRGARLSAAGI+GILKK
Sbjct: 361 SAMHHDTSPDLRVVGSKLKDILDIPNTSLKTRKVVIELCDIVATRGARLSAAGILGILKK 420
Query: 388 LGRDTVRD-GEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSG 446
LGRDT+++ G+KQ SVIALDGGL+EHYT+F C++ST+KELLG EVS+ +VI+HSNDGSG
Sbjct: 421 LGRDTMKEGGDKQNSVIALDGGLYEHYTEFRTCLESTLKELLGAEVSDNIVIKHSNDGSG 480
Query: 447 IGAALLAASHSQYLE 461
IGAALLAASHSQYLE
Sbjct: 481 IGAALLAASHSQYLE 495
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|209978718|gb|ACJ04704.1| hexokinase 1 [Cucumis melo] | Back alignment and taxonomy information |
|---|
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/497 (80%), Positives = 433/497 (87%), Gaps = 33/497 (6%)
Query: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
MGKV V A VVCAAAVCAAAALVVR RM+++G+WARA+AIL+E EEKCGTPIGKLRQVAD
Sbjct: 1 MGKVAVGAAVVCAAAVCAAAALVVRHRMRNSGKWARAMAILREFEEKCGTPIGKLRQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGG+E R
Sbjct: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGKENR 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
VVKQEFEEVSIPPHLM GSS LFD+IA ALAKFVA EGEGFH +PGRQRELGFTFSFPV
Sbjct: 121 VVKQEFEEVSIPPHLMVGSSEALFDFIAQALAKFVAEEGEGFHPAPGRQRELGFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
RQTSI+SG LIKWTKGFSIEDTVGEDVVGELTKAME++ LDMRV ALVNDTIGTLAGGRY
Sbjct: 181 RQTSISSGTLIKWTKGFSIEDTVGEDVVGELTKAMEKLKLDMRVTALVNDTIGTLAGGRY 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM--------------------- 279
H+ D IAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM
Sbjct: 241 HDNDVIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLSLTEYDH 300
Query: 280 ------------IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM 327
IFEK+ISGMYLGEIVR+VL +MAEEA FG+T PPKLKIPFILRTPHM
Sbjct: 301 ALDAESLNPGEQIFEKLISGMYLGEIVRKVLVKMAEEATIFGETAPPKLKIPFILRTPHM 360
Query: 328 SAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387
SAMHHDTSPDL+VV KLKD+LEISNTSLK RK++VELCD+VATRGARLSAAGI+GILKK
Sbjct: 361 SAMHHDTSPDLKVVANKLKDVLEISNTSLKTRKIIVELCDVVATRGARLSAAGILGILKK 420
Query: 388 LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGI 447
LGRDT+R GEKQKSV+ALDGGL+EHYT+F M++T+KELLG+EV+ V +EHSNDGSGI
Sbjct: 421 LGRDTIRVGEKQKSVVALDGGLYEHYTEFRTTMENTLKELLGDEVAANVFVEHSNDGSGI 480
Query: 448 GAALLAASHSQYLEVEE 464
GAALLAASHSQYLEV+E
Sbjct: 481 GAALLAASHSQYLEVDE 497
|
Source: Cucumis melo Species: Cucumis melo Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224143653|ref|XP_002325031.1| predicted protein [Populus trichocarpa] gi|222866465|gb|EEF03596.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/498 (81%), Positives = 430/498 (86%), Gaps = 33/498 (6%)
Query: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
MGKV V A VVCAA VCAAAALVVR RM+ +GRWARA+AIL+E EE CGTPIGKLRQVAD
Sbjct: 1 MGKVAVGAAVVCAATVCAAAALVVRHRMRCSGRWARAMAILREFEENCGTPIGKLRQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AMTVEMHAGLASEGGSKLKMLISYVDNLP+G+E GLFYALDLGGTNFRV+RV LGGR+G
Sbjct: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPSGEENGLFYALDLGGTNFRVIRVLLGGRDGG 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
VVKQEFEEVSIPPHLMTGSS LF +IA ALA FVATE EG H SPGRQRELGFTFSFPV
Sbjct: 121 VVKQEFEEVSIPPHLMTGSSDALFGFIATALANFVATESEGLHCSPGRQRELGFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
RQTSIASG+LIKWTKGFSI+D VGEDVVGELTKAMERIGLDMRV+ALVNDTIGTLAGGRY
Sbjct: 181 RQTSIASGNLIKWTKGFSIDDVVGEDVVGELTKAMERIGLDMRVSALVNDTIGTLAGGRY 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM--------------------- 279
HN D IAAVILGTGTNAAYVERA AIPKWHGLLPKSGEM
Sbjct: 241 HNPDVIAAVILGTGTNAAYVERAQAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDQ 300
Query: 280 ------------IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM 327
IFEKIISGMYLGEIVRRVL +MAEEA FFGD VP KLKIPFILRTPHM
Sbjct: 301 DLDVESLNPGEQIFEKIISGMYLGEIVRRVLLKMAEEAAFFGDIVPQKLKIPFILRTPHM 360
Query: 328 SAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387
SAMHHD S DLRVVG KLKDILEI +TSLKMRK +VELCDIVATRGARLSAAGIVGI+KK
Sbjct: 361 SAMHHDESSDLRVVGSKLKDILEIPHTSLKMRKAIVELCDIVATRGARLSAAGIVGIIKK 420
Query: 388 LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGI 447
LGRDTV+DGEKQKSVIA+DGGL+EHY+KFS CM+ST+KELLGEEVS+ +V+E SNDGSGI
Sbjct: 421 LGRDTVKDGEKQKSVIAMDGGLYEHYSKFSTCMESTLKELLGEEVSDNIVVEQSNDGSGI 480
Query: 448 GAALLAASHSQYLEVEES 465
GAALLAASHSQYLEVEES
Sbjct: 481 GAALLAASHSQYLEVEES 498
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255546323|ref|XP_002514221.1| hexokinase, putative [Ricinus communis] gi|223546677|gb|EEF48175.1| hexokinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/497 (79%), Positives = 421/497 (84%), Gaps = 33/497 (6%)
Query: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
MGKV V A VCAAAVCA+AALVVR RMKS+GRW RA+AIL E EEKCGTP+GKLRQVAD
Sbjct: 1 MGKVAVGAAAVCAAAVCASAALVVRHRMKSSGRWTRAMAILGEFEEKCGTPVGKLRQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AMTVEMHAGLASEGGSKLKM+ISYVDNLPTGDEKGLFYALDLGGTNFRVLRV LGG+E R
Sbjct: 61 AMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGLFYALDLGGTNFRVLRVLLGGKEDR 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
VVKQEFEEVSIPPHLM GSS LFD+IA AL KFVATEGE H PG+QRELGFTFSFPV
Sbjct: 121 VVKQEFEEVSIPPHLMIGSSDALFDFIADALKKFVATEGEDLHPLPGQQRELGFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
RQ SIASG LIKWTKGFSIEDTVGEDVVGELTKAM+R+GLDMRVAALVNDTIGTLAGGRY
Sbjct: 181 RQASIASGTLIKWTKGFSIEDTVGEDVVGELTKAMDRVGLDMRVAALVNDTIGTLAGGRY 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKS------------------------ 276
H++D IA VILGTGTNAAYVERA AIPKWHGLLPKS
Sbjct: 241 HSQDVIAGVILGTGTNAAYVERAQAIPKWHGLLPKSDEMVINMEWGNFRSSHLPLTEYDE 300
Query: 277 ---------GEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM 327
GE IFEKIISGMYLGEIVRRVL +MAEEAN FGD VPPKL+IPFILRTP M
Sbjct: 301 ALDIESLNPGEQIFEKIISGMYLGEIVRRVLLKMAEEANLFGDVVPPKLEIPFILRTPVM 360
Query: 328 SAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387
SAMH DTS DLRVVG KLKDILEI NTSLK RK +V+LCDIVATRGARLSAAGIVGILKK
Sbjct: 361 SAMHQDTSSDLRVVGSKLKDILEIPNTSLKTRKAIVKLCDIVATRGARLSAAGIVGILKK 420
Query: 388 LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGI 447
LGRDT+++ EK KSVIA+DGGLFEHYTKF C++ST++ELLG+EVSE +V+EHSNDGSGI
Sbjct: 421 LGRDTIKEREKHKSVIAMDGGLFEHYTKFRVCLESTIEELLGKEVSENIVVEHSNDGSGI 480
Query: 448 GAALLAASHSQYLEVEE 464
GAALLAASHS Y EV E
Sbjct: 481 GAALLAASHSLYREVAE 497
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356523741|ref|XP_003530493.1| PREDICTED: hexokinase-1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/498 (78%), Positives = 431/498 (86%), Gaps = 33/498 (6%)
Query: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
MGKV V A VVCAAAVCAAAALVVR RM S+ +W+RA+AILKE EEKCGTPI KLRQVAD
Sbjct: 1 MGKVAVGAAVVCAAAVCAAAALVVRHRMISSRKWSRAMAILKEFEEKCGTPIVKLRQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AM VEMHAGLASEGGSKL MLIS+VDNLPTGDE+GL+YALDLGGTNFRVLRV LGG++
Sbjct: 61 AMDVEMHAGLASEGGSKLNMLISFVDNLPTGDEEGLYYALDLGGTNFRVLRVHLGGKDKG 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
V+ QEFEEVSIPP+LMTGSS LFD+IAAALAKFV +E EGFH PGRQRELGFTFSFPV
Sbjct: 121 VIGQEFEEVSIPPNLMTGSSDALFDFIAAALAKFVGSEPEGFHPPPGRQRELGFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
RQTSIASG LIKWTKGF+IED VGEDVVGELTK+ME+IGLDMRVAALVNDTIGTLAGGR+
Sbjct: 181 RQTSIASGTLIKWTKGFNIEDAVGEDVVGELTKSMEKIGLDMRVAALVNDTIGTLAGGRF 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM--------------------- 279
+N+D IAAVILGTGTNAAYVERAHAIPKWHGL+PKSG+M
Sbjct: 241 YNQDVIAAVILGTGTNAAYVERAHAIPKWHGLIPKSGDMVINMEWGNFRSSHLPLTEYDL 300
Query: 280 ------------IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM 327
IFEK+ISGMYLGE+VRR L +MAEEA+FFGDTVPPKLK+PFILRTP M
Sbjct: 301 ALDAQSLNPGEQIFEKLISGMYLGEVVRRALLKMAEEADFFGDTVPPKLKVPFILRTPDM 360
Query: 328 SAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387
SAMHHDTS DL+VVG KLKDILEISNTSLKMRK+VVELCDIVATRGARL+AAGI+GILKK
Sbjct: 361 SAMHHDTSSDLKVVGNKLKDILEISNTSLKMRKIVVELCDIVATRGARLAAAGILGILKK 420
Query: 388 LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGI 447
+GRDTV+ GEKQKSVIALDGGLFEHYTKF C++S +KELLG+E +ET+VIEH+NDGSGI
Sbjct: 421 IGRDTVKVGEKQKSVIALDGGLFEHYTKFRECLESALKELLGDEAAETIVIEHANDGSGI 480
Query: 448 GAALLAASHSQYLEVEES 465
GAALLAASHSQYL VEES
Sbjct: 481 GAALLAASHSQYLGVEES 498
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513171|ref|XP_003525287.1| PREDICTED: hexokinase-1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/498 (78%), Positives = 430/498 (86%), Gaps = 33/498 (6%)
Query: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
MGKV V A VVCAAAVCA AALVVR RM S+ +W+RA+AILKE E+KCGTPI KLRQVAD
Sbjct: 1 MGKVAVGAAVVCAAAVCATAALVVRHRMISSRKWSRAMAILKEFEDKCGTPIVKLRQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AM VEMHAGLASEGGSKL MLIS+VDNLPTGDE+GL+YALDLGGTNFRVLRV LGG++
Sbjct: 61 AMDVEMHAGLASEGGSKLNMLISFVDNLPTGDEEGLYYALDLGGTNFRVLRVHLGGKDKG 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
V+ QEFEEVSIPP+LMTGSS LFD+IAAALAKFV +E EGFH PGRQRELGFTFSFPV
Sbjct: 121 VIGQEFEEVSIPPNLMTGSSEALFDFIAAALAKFVGSEPEGFHPPPGRQRELGFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
RQTSIASG LIKWTKGF+IED VGEDVVGELTK+ME+IGLDMRVAALVNDTIGTLAGGR+
Sbjct: 181 RQTSIASGTLIKWTKGFNIEDVVGEDVVGELTKSMEKIGLDMRVAALVNDTIGTLAGGRF 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM--------------------- 279
+N+D +AAVILGTGTNAAYVERAHAIPKWHGL+PKSG+M
Sbjct: 241 YNQDVVAAVILGTGTNAAYVERAHAIPKWHGLIPKSGDMVINMEWGNFRSSHLPLTEYDL 300
Query: 280 ------------IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM 327
IFEK+ISGMYLGEIVRR L +MAEEA+FFGDTVPPKLK+PFILRTP M
Sbjct: 301 ALDAESLNPGEQIFEKLISGMYLGEIVRRALFKMAEEADFFGDTVPPKLKVPFILRTPDM 360
Query: 328 SAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387
SAMHHDTS DL+VVG KLKDILEISNTSLKMRK+VVELCDIVATRGARL+AAGI+GILKK
Sbjct: 361 SAMHHDTSSDLKVVGNKLKDILEISNTSLKMRKIVVELCDIVATRGARLAAAGILGILKK 420
Query: 388 LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGI 447
+GRDTV+ GEKQKSVIALDGGLFEHYTKF C++ T+KELLG+E +ET+VIEH+NDGSGI
Sbjct: 421 IGRDTVKVGEKQKSVIALDGGLFEHYTKFRECLEGTLKELLGDEAAETIVIEHANDGSGI 480
Query: 448 GAALLAASHSQYLEVEES 465
GAALLAASHSQYL VEES
Sbjct: 481 GAALLAASHSQYLGVEES 498
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 465 | ||||||
| TAIR|locus:2119931 | 496 | HXK1 "hexokinase 1" [Arabidops | 0.602 | 0.564 | 0.757 | 1.4e-185 | |
| TAIR|locus:2051920 | 502 | HXK2 "hexokinase 2" [Arabidops | 0.602 | 0.557 | 0.757 | 3.7e-185 | |
| TAIR|locus:2008031 | 498 | HKL1 "AT1G50460" [Arabidopsis | 0.6 | 0.560 | 0.539 | 3.7e-116 | |
| TAIR|locus:2087590 | 502 | ATHXK4 "AT3G20040" [Arabidopsi | 0.602 | 0.557 | 0.507 | 3.4e-113 | |
| TAIR|locus:2202410 | 493 | HXK3 "hexokinase 3" [Arabidops | 0.503 | 0.474 | 0.587 | 5.6e-109 | |
| TAIR|locus:2137564 | 493 | HKL3 "AT4G37840" [Arabidopsis | 0.359 | 0.338 | 0.540 | 5.6e-88 | |
| CGD|CAL0000198 | 484 | HXK2 [Candida albicans (taxid: | 0.488 | 0.469 | 0.4 | 1.6e-59 | |
| POMBASE|SPAC24H6.04 | 484 | hxk1 "hexokinase 1" [Schizosac | 0.501 | 0.481 | 0.380 | 2.6e-59 | |
| WB|WBGene00008780 | 500 | F14B4.2 [Caenorhabditis elegan | 0.486 | 0.452 | 0.421 | 3.8e-56 | |
| UNIPROTKB|Q19440 | 500 | F14B4.2 "Protein F14B4.2, isof | 0.486 | 0.452 | 0.421 | 3.8e-56 |
| TAIR|locus:2119931 HXK1 "hexokinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1101 (392.6 bits), Expect = 1.4e-185, Sum P(2) = 1.4e-185
Identities = 212/280 (75%), Positives = 236/280 (84%)
Query: 1 MGKXXXXXXXXXXXXXXXXXXXXXRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
MGK RRRM+S+G+W R +AILK EE C TPI KLRQVAD
Sbjct: 1 MGKVAVGATVVCTAAVCAVAVLVVRRRMQSSGKWGRVLAILKAFEEDCATPISKLRQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AMTVEMHAGLAS+GGSKLKMLISYVDNLP+GDEKGLFYALDLGGTNFRV+RV LGG++ R
Sbjct: 61 AMTVEMHAGLASDGGSKLKMLISYVDNLPSGDEKGLFYALDLGGTNFRVMRVLLGGKQER 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
VVKQEFEEVSIPPHLMTG S ELF++IA ALAKFVATE E FH+ GRQRELGFTFSFPV
Sbjct: 121 VVKQEFEEVSIPPHLMTGGSDELFNFIAEALAKFVATECEDFHLPEGRQRELGFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
+QTS++SG LIKWTKGFSIE+ VG+DVVG L KA+ER+GLDMR+AALVNDT+GTLAGGRY
Sbjct: 181 KQTSLSSGSLIKWTKGFSIEEAVGQDVVGALNKALERVGLDMRIAALVNDTVGTLAGGRY 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMI 280
+N D +AAVILGTGTNAAYVERA AIPKWHGLLPKSGEM+
Sbjct: 241 YNPDVVAAVILGTGTNAAYVERATAIPKWHGLLPKSGEMV 280
|
|
| TAIR|locus:2051920 HXK2 "hexokinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1099 (391.9 bits), Expect = 3.7e-185, Sum P(2) = 3.7e-185
Identities = 212/280 (75%), Positives = 229/280 (81%)
Query: 1 MGKXXXXXXXXXXXXXXXXXXXXXRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
MGK RRRMKS G+WAR + ILK EE C TPI KLRQVAD
Sbjct: 1 MGKVAVATTVVCSVAVCAAAALIVRRRMKSAGKWARVIEILKAFEEDCATPIAKLRQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AMTVEMHAGLASEGGSKLKMLISYVDNLP+GDE G FYALDLGGTNFRV+RV LGG+ R
Sbjct: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPSGDETGFFYALDLGGTNFRVMRVLLGGKHDR 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
VVK+EF+E SIPPHLMTG SHELFD+I LAKFVATEGE FH+ PGRQRELGFTFSFPV
Sbjct: 121 VVKREFKEESIPPHLMTGKSHELFDFIVDVLAKFVATEGEDFHLPPGRQRELGFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
+Q S++SG LI WTKGFSI+DTV +DVVGEL KAMER+GLDM VAALVNDTIGTLAGGRY
Sbjct: 181 KQLSLSSGTLINWTKGFSIDDTVDKDVVGELVKAMERVGLDMLVAALVNDTIGTLAGGRY 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMI 280
N D + AVILGTGTNAAYVERAHAIPKWHGLLPKSGEM+
Sbjct: 241 TNPDVVVAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMV 280
|
|
| TAIR|locus:2008031 HKL1 "AT1G50460" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 744 (267.0 bits), Expect = 3.7e-116, Sum P(2) = 3.7e-116
Identities = 151/280 (53%), Positives = 187/280 (66%)
Query: 1 MGKXXXXXXXXXXXXXXXXXXXXXRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
MGK RRMKS +W V ILKE+E+ C TP+G+LRQV D
Sbjct: 1 MGKVAVAFAAVAVVAACSVAAVMVGRRMKSRRKWRTVVEILKELEDDCDTPVGRLRQVVD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AM VEMHAGLASEGGSKLKML+++VD+LPTG EKG +YAL LGGT FR+LRV LG +
Sbjct: 61 AMAVEMHAGLASEGGSKLKMLLTFVDDLPTGREKGTYYALHLGGTYFRILRVLLGDQRSY 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
+ Q+ E IP HLM +S LF+++A +L +F+ E G S G +REL FTFSFPV
Sbjct: 121 LDVQDVERHPIPSHLMNSTSEVLFNFLAFSLERFIEKEENGSD-SQGVRRELAFTFSFPV 179
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
+ TSI+SG LIKWTKGF I + VG+D+ L A+ R GLDM VAALVNDT+G L+ G Y
Sbjct: 180 KHTSISSGVLIKWTKGFEISEMVGQDIAECLQGALNRRGLDMHVAALVNDTVGALSLGYY 239
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMI 280
H+ D + AV+ GTG+NA Y+ER AI K GLL SG M+
Sbjct: 240 HDPDTVVAVVFGTGSNACYLERTDAIIKCQGLLTTSGSMV 279
|
|
| TAIR|locus:2087590 ATHXK4 "AT3G20040" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 727 (261.0 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
Identities = 142/280 (50%), Positives = 187/280 (66%)
Query: 1 MGKXXXXXXXXXXXXXXXXXXXXXRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
MGK RRRMK +W R V +LK++EE C TP+G+LRQ+ D
Sbjct: 1 MGKVLVMLTAAAAVVACSVATVMVRRRMKGRRKWRRVVGLLKDLEEACETPLGRLRQMVD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
A+ VEM AGL SEGGSKLKML+++VD+LP G E G +YAL LGG+ FR+++V LGG+
Sbjct: 61 AIAVEMQAGLVSEGGSKLKMLLTFVDDLPNGSETGTYYALHLGGSYFRIIKVHLGGQRSS 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
+ Q+ E SIP LM +S LFD++A++L +F+ EG F +S +REL FTFSFPV
Sbjct: 121 LEVQDVERHSIPTSLMNSTSEVLFDFLASSLQRFIEKEGNDFSLSQPLKRELAFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
+QTSI+SG LIKWTKGF+I + GED+ L A+ + GLD+RVAALVNDT+G L+ G +
Sbjct: 181 KQTSISSGVLIKWTKGFAISEMAGEDIAECLQGALNKRGLDIRVAALVNDTVGALSFGHF 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMI 280
H+ D IAAV+ GTG+NA Y+ER AI K SG M+
Sbjct: 241 HDPDTIAAVVFGTGSNACYLERTDAIIKCQNPRTTSGSMV 280
|
|
| TAIR|locus:2202410 HXK3 "hexokinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 677 (243.4 bits), Expect = 5.6e-109, Sum P(2) = 5.6e-109
Identities = 138/235 (58%), Positives = 173/235 (73%)
Query: 35 ARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEK 94
A IL + ++ C TP LR VA+A+ +M GLA EGG L+M++++VD LP+G+E+
Sbjct: 38 ASTCPILTKFQKDCATPTPYLRNVANAIADDMRDGLAVEGGGDLEMILTFVDALPSGNEE 97
Query: 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKF 154
GLFYALDLGGTNFRV VQLGG++ RV+ E E++SI LM G+S ELF +IA+ LA F
Sbjct: 98 GLFYALDLGGTNFRVRSVQLGGKKERVLATESEQISISQKLMIGTSEELFGFIASKLANF 157
Query: 155 VATEGEG-FHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTK 213
VA E G F + GR+RELGFTFSFPV+QTSI SG L KWTKGF + G++VV L +
Sbjct: 158 VAKEKPGRFLLEEGRKRELGFTFSFPVKQTSIDSGTLSKWTKGFKVSGMEGKNVVACLNE 217
Query: 214 AMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPK 268
AME GLDMRV+ALVND +GTLAG RY ++D + VILGTGTNA YVE+ HAIPK
Sbjct: 218 AMEAHGLDMRVSALVNDGVGTLAGARYWDEDVMVGVILGTGTNACYVEQKHAIPK 272
|
|
| TAIR|locus:2137564 HKL3 "AT4G37840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 472 (171.2 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
Identities = 93/172 (54%), Positives = 129/172 (75%)
Query: 277 GEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSP 336
G IFEK++SG YLGEIVRRVL +M+EE+ FGDT+PPKL IP+IL +P M+AMH D S
Sbjct: 310 GHRIFEKMVSGRYLGEIVRRVLLKMSEESALFGDTLPPKLTIPYILWSPDMAAMHQDISE 369
Query: 337 DLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDG 396
+ V KKLK++ I +++L R++VVE+CD+VA R ARL+ AGIVG++KKLGR
Sbjct: 370 ERETVNKKLKEVFGIMDSTLAAREVVVEVCDVVAERAARLAGAGIVGMIKKLGRL----- 424
Query: 397 EKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 448
EK+ S++ ++GGL++HY F + S+V E+LG+E+S+ VVIEHS+ GS G
Sbjct: 425 EKKMSIVIVEGGLYDHYRVFRNYLHSSVWEMLGDELSDHVVIEHSHGGSAAG 476
|
|
| CGD|CAL0000198 HXK2 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 412 (150.1 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 94/235 (40%), Positives = 136/235 (57%)
Query: 41 LKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYAL 100
LK ++E+ KLR + E+ GL+ GG+ + M+ +V + PTG E G + A+
Sbjct: 27 LKPIQEQFTISADKLRAIVKHFISELDRGLSKAGGN-IPMIPGWVMDFPTGKETGSYLAI 85
Query: 101 DLGGTNFRVLRVQLGG-REGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEG 159
DLGGTN RV+ V+LGG R+ + +F ++P H+ T +S EL+D+IA L +FV
Sbjct: 86 DLGGTNLRVVLVKLGGNRDFDTTQSKF---ALPAHMRTATSDELWDFIAKCLKEFV---D 139
Query: 160 EGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG 219
E + LGFTFS+P Q I G L +WTKG+SI+ G+DVV L KA++++G
Sbjct: 140 EIYPDGCSEPLPLGFTFSYPASQNRINEGILQRWTKGWSIDGIEGKDVVPMLQKAIKKVG 199
Query: 220 LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLP 274
+ + V AL+NDT GTL Y + +A +I GTG N AY + IPK G P
Sbjct: 200 VPIDVVALINDTTGTLVASMYTDPEAKMGLIFGTGVNGAYFDVVKDIPKLEGKCP 254
|
|
| POMBASE|SPAC24H6.04 hxk1 "hexokinase 1" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 392 (143.0 bits), Expect = 2.6e-59, Sum P(2) = 2.6e-59
Identities = 92/242 (38%), Positives = 131/242 (54%)
Query: 41 LKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYAL 100
L E+EE+ P L +V D E++ GL + G + M+ +++ P G+E G + AL
Sbjct: 31 LDELEEQFTIPTELLHRVTDRFVSELYKGLTTNPGD-VPMVPTWIIGTPDGNEHGSYLAL 89
Query: 101 DLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGE 160
DLGGTN RV V++ G + Q + +P L G+ LFDYIA + KFV E
Sbjct: 90 DLGGTNLRVCAVEVQGNGKFDITQS--KYRLPQELKVGTREALFDYIADCIKKFV----E 143
Query: 161 GFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGL 220
H + E+GFTFS+P Q SI L+ WTKGF I+ GE V L+ A++R+G
Sbjct: 144 EVHPGKSQNLEIGFTFSYPCVQRSINDASLVAWTKGFDIDGVEGESVGPLLSAALKRVGC 203
Query: 221 D-MRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGL-LPKSGE 278
+ +R+ A+++DT GTL Y + VI GTG NA Y+E+ IPK H P+
Sbjct: 204 NNVRLNAILSDTTGTLVASNYASPGTEIGVIFGTGCNACYIEKFSEIPKLHKYDFPEDMN 263
Query: 279 MI 280
MI
Sbjct: 264 MI 265
|
|
| WB|WBGene00008780 F14B4.2 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 429 (156.1 bits), Expect = 3.8e-56, Sum P(2) = 3.8e-56
Identities = 99/235 (42%), Positives = 136/235 (57%)
Query: 54 KLRQVADAMTVEMHAGLASEGGS-KLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112
+LR++ +M M GLA+ +KML +YVD++P G E G F ALDLGGTNFRVL +
Sbjct: 52 QLRRIMQSMEKSMEQGLATSTKKVAVKMLPTYVDSVPNGTESGDFLALDLGGTNFRVLHI 111
Query: 113 QLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172
+L G+E ++ + F +P +M G+ LFD+IA +AKF+ GE + ++ L
Sbjct: 112 KLQGKETKMTGKIFR---VPESIMRGTGEALFDHIAGCMAKFM---GEN-DLKDAQKLPL 164
Query: 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDT 231
GFTFSFP Q + G L+ WTKGF G DVV L +A R +D+ V AL+NDT
Sbjct: 165 GFTFSFPCEQEGLTKGKLVTWTKGFKASGVEGVDVVTLLHEACHRRKDIDIDVVALLNDT 224
Query: 232 IGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMIFEKIIS 286
+GTL + VI+GTGTNA Y+ER IPK G + + G E II+
Sbjct: 225 VGTLMACAFQENSCQIGVIVGTGTNACYMERLDRIPKLAGYVDEHGVTPEEMIIN 279
|
|
| UNIPROTKB|Q19440 F14B4.2 "Protein F14B4.2, isoform a" [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 429 (156.1 bits), Expect = 3.8e-56, Sum P(2) = 3.8e-56
Identities = 99/235 (42%), Positives = 136/235 (57%)
Query: 54 KLRQVADAMTVEMHAGLASEGGS-KLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112
+LR++ +M M GLA+ +KML +YVD++P G E G F ALDLGGTNFRVL +
Sbjct: 52 QLRRIMQSMEKSMEQGLATSTKKVAVKMLPTYVDSVPNGTESGDFLALDLGGTNFRVLHI 111
Query: 113 QLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172
+L G+E ++ + F +P +M G+ LFD+IA +AKF+ GE + ++ L
Sbjct: 112 KLQGKETKMTGKIFR---VPESIMRGTGEALFDHIAGCMAKFM---GEN-DLKDAQKLPL 164
Query: 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDT 231
GFTFSFP Q + G L+ WTKGF G DVV L +A R +D+ V AL+NDT
Sbjct: 165 GFTFSFPCEQEGLTKGKLVTWTKGFKASGVEGVDVVTLLHEACHRRKDIDIDVVALLNDT 224
Query: 232 IGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMIFEKIIS 286
+GTL + VI+GTGTNA Y+ER IPK G + + G E II+
Sbjct: 225 VGTLMACAFQENSCQIGVIVGTGTNACYMERLDRIPKLAGYVDEHGVTPEEMIIN 279
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SQ76 | HXK2_SOLTU | 2, ., 7, ., 1, ., 1 | 0.7061 | 0.9462 | 0.8870 | N/A | no |
| P93834 | HXK2_ARATH | 2, ., 7, ., 1, ., 1 | 0.7444 | 0.9978 | 0.9243 | yes | no |
| O64390 | HXK1_SOLTU | 2, ., 7, ., 1, ., 1 | 0.6237 | 0.9870 | 0.9216 | N/A | no |
| Q9SEK3 | HXK1_SPIOL | 2, ., 7, ., 1, ., 1 | 0.7383 | 0.9483 | 0.8855 | N/A | no |
| Q9SEK2 | HXK1_TOBAC | 2, ., 7, ., 1, ., 1 | 0.6923 | 0.9913 | 0.9275 | N/A | no |
| Q6Q8A5 | HXK2_TOBAC | 2, ., 7, ., 1, ., 1 | 0.5651 | 0.9010 | 0.8396 | N/A | no |
| Q8LQ68 | HXK6_ORYSJ | 2, ., 7, ., 1, ., 1 | 0.6484 | 0.9096 | 0.8359 | yes | no |
| Q42525 | HXK1_ARATH | 2, ., 7, ., 1, ., 1 | 0.7469 | 0.9913 | 0.9294 | no | no |
| P80581 | HXK_EMENI | 2, ., 7, ., 1, ., 1 | 0.3311 | 0.8559 | 0.8122 | yes | no |
| Q09756 | HXK1_SCHPO | 2, ., 7, ., 1, ., 1 | 0.3170 | 0.8559 | 0.8223 | yes | no |
| Q2KNB9 | HXK2_ORYSJ | 2, ., 7, ., 1, ., 1 | 0.6974 | 0.9505 | 0.8947 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00016656001 | SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (470 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| GSVIVG00012389001 | SubName- Full=Chromosome undetermined scaffold_376, whole genome shotgun sequence; (365 aa) | • | • | 0.925 | |||||||
| GSVIVG00014624001 | RecName- Full=Glucose-6-phosphate isomerase; EC=5.3.1.9; (340 aa) | • | • | • | 0.920 | ||||||
| GSVIVG00038234001 | RecName- Full=Mannose-6-phosphate isomerase; EC=5.3.1.8; (420 aa) | • | • | • | 0.919 | ||||||
| GSVIVG00026780001 | SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (249 aa) | • | • | 0.914 | |||||||
| GSVIVG00030550001 | SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (581 aa) | • | • | • | 0.913 | ||||||
| GSVIVG00010600001 | SubName- Full=Chromosome chr16 scaffold_271, whole genome shotgun sequence; (621 aa) | • | • | • | 0.912 | ||||||
| GSVIVG00015125001 | RecName- Full=Glucose-6-phosphate isomerase; EC=5.3.1.9; (623 aa) | • | • | 0.904 | |||||||
| GSVIVG00025935001 | SubName- Full=Chromosome chr12 scaffold_36, whole genome shotgun sequence; (563 aa) | • | • | 0.901 | |||||||
| GSVIVG00012394001 | SubName- Full=Chromosome undetermined scaffold_376, whole genome shotgun sequence;; Involved in [...] (366 aa) | • | • | 0.900 | |||||||
| GSVIVG00031779001 | SubName- Full=Chromosome chr18 scaffold_59, whole genome shotgun sequence; (338 aa) | • | • | 0.900 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 465 | |||
| PLN02405 | 497 | PLN02405, PLN02405, hexokinase | 0.0 | |
| PLN02362 | 509 | PLN02362, PLN02362, hexokinase | 0.0 | |
| PLN02914 | 490 | PLN02914, PLN02914, hexokinase | 0.0 | |
| PLN02596 | 490 | PLN02596, PLN02596, hexokinase-like | 1e-173 | |
| COG5026 | 466 | COG5026, COG5026, Hexokinase [Carbohydrate transpo | 8e-87 | |
| PTZ00107 | 464 | PTZ00107, PTZ00107, hexokinase; Provisional | 3e-83 | |
| pfam00349 | 205 | pfam00349, Hexokinase_1, Hexokinase | 2e-61 | |
| pfam03727 | 238 | pfam03727, Hexokinase_2, Hexokinase | 7e-47 | |
| cd00012 | 185 | cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide- | 3e-05 |
| >gnl|CDD|215226 PLN02405, PLN02405, hexokinase | Back alignment and domain information |
|---|
Score = 919 bits (2378), Expect = 0.0
Identities = 409/497 (82%), Positives = 438/497 (88%), Gaps = 33/497 (6%)
Query: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
MGKV V A VVCAAAVCAAAALVVRRRMKS+G+WARA+ ILKE EE C TPIGKLRQVAD
Sbjct: 1 MGKVAVGAAVVCAAAVCAAAALVVRRRMKSSGKWARAMEILKEFEEDCATPIGKLRQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AMTVEMHAGLASEGGSKLKMLISYVDNLP+GDEKGLFYALDLGGTNFRVLRV LGG++GR
Sbjct: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPSGDEKGLFYALDLGGTNFRVLRVLLGGKDGR 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
VVKQEFEEVSIPPHLMTGSS LFD+IAAALAKFVATEGE FH+ PGRQRELGFTFSFPV
Sbjct: 121 VVKQEFEEVSIPPHLMTGSSDALFDFIAAALAKFVATEGEDFHLPPGRQRELGFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
+QTSI+SG LIKWTKGFSI+D VG+DVVGELTKAMER+GLDMRV+ALVNDTIGTLAGGRY
Sbjct: 181 KQTSISSGTLIKWTKGFSIDDAVGQDVVGELTKAMERVGLDMRVSALVNDTIGTLAGGRY 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM--------------------- 279
+N D +AAVILGTGTNAAYVERA AIPKWHGLLPKSGEM
Sbjct: 241 YNPDVVAAVILGTGTNAAYVERAQAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDH 300
Query: 280 ------------IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM 327
IFEKIISGMYLGEI+RRVL +MAEEA FFGDTVPPKLKIPFILRTP M
Sbjct: 301 ALDVESLNPGEQIFEKIISGMYLGEILRRVLLKMAEEAAFFGDTVPPKLKIPFILRTPDM 360
Query: 328 SAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387
SAMHHDTSPDL+VVG KLKDILEI NTSLKMRK+VVELC+IVATRGARLSAAGI GILKK
Sbjct: 361 SAMHHDTSPDLKVVGSKLKDILEIPNTSLKMRKVVVELCNIVATRGARLSAAGIYGILKK 420
Query: 388 LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGI 447
LGRDTV+DGEKQKSVIA+DGGLFEHYT+FS CM+ST+KELLGEEVSE++ +EHSNDGSGI
Sbjct: 421 LGRDTVKDGEKQKSVIAMDGGLFEHYTEFSKCMESTLKELLGEEVSESIEVEHSNDGSGI 480
Query: 448 GAALLAASHSQYLEVEE 464
GAALLAASHS YLEVEE
Sbjct: 481 GAALLAASHSLYLEVEE 497
|
Length = 497 |
| >gnl|CDD|215206 PLN02362, PLN02362, hexokinase | Back alignment and domain information |
|---|
Score = 584 bits (1508), Expect = 0.0
Identities = 273/502 (54%), Positives = 348/502 (69%), Gaps = 44/502 (8%)
Query: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
MGKV V A A CA AA++V RR+KS +W R V +LKE+EE C TP+G+LRQV D
Sbjct: 1 MGKVAVGLAAAAAVAACAVAAVMVGRRVKSRRKWRRVVGVLKELEEACETPVGRLRQVVD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AM VEMHAGLASEGGSKLKML+++VD+LPTG E G +YALDLGGTNFRVLRVQLGG+
Sbjct: 61 AMAVEMHAGLASEGGSKLKMLLTFVDDLPTGSEIGTYYALDLGGTNFRVLRVQLGGQRSS 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
++ Q+ E IP HLM +S LFD+IA++L +FV E G S R+RELGFTFSFPV
Sbjct: 121 ILSQDVERHPIPQHLMNSTSEVLFDFIASSLKQFVEKEENGSEFSQVRRRELGFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
+QTSI+SG LIKWTKGF+I D VG+DV L A+ R GLDMRVAALVNDT+GTLA G Y
Sbjct: 181 KQTSISSGILIKWTKGFAISDMVGKDVAECLQGALNRRGLDMRVAALVNDTVGTLALGHY 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMI-------------------- 280
H+ D +AAVI+GTGTNA Y+ER AI K GLL SG M+
Sbjct: 241 HDPDTVAAVIIGTGTNACYLERTDAIIKCQGLLTTSGSMVVNMEWGNFWSSHLPRTSYDI 300
Query: 281 -------------FEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM 327
FEK+ISGMYLG+IVRRV+ RM++E++ FG V +L PF+LRTP +
Sbjct: 301 DLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSQESDIFG-PVSSRLSTPFVLRTPSV 359
Query: 328 SAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387
+AMH D SP+L+ V + LK+ L IS LK+RKLVV++CD+V R ARL+AAGIVGILKK
Sbjct: 360 AAMHEDDSPELQEVARILKETLGISEVPLKVRKLVVKICDVVTRRAARLAAAGIVGILKK 419
Query: 388 LGRDTV----------RDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVV 437
+GRD +++V+A++GGL+ +YT F + + E+LGE+V++ V+
Sbjct: 420 IGRDGSGGITSGRSRSDIQIMRRTVVAVEGGLYTNYTMFREYLHEALNEILGEDVAQHVI 479
Query: 438 IEHSNDGSGIGAALLAASHSQY 459
++ + DGSGIG+ALLAAS+S Y
Sbjct: 480 LKATEDGSGIGSALLAASYSSY 501
|
Length = 509 |
| >gnl|CDD|178502 PLN02914, PLN02914, hexokinase | Back alignment and domain information |
|---|
Score = 555 bits (1432), Expect = 0.0
Identities = 264/491 (53%), Positives = 329/491 (67%), Gaps = 33/491 (6%)
Query: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
M V + + + R RM IL ++++ C TP+ LR VAD
Sbjct: 1 MFSSPVVTPAIGSFTFSSRPRRRPRSRMAVRSNAVSVAPILTKLQKDCATPLPVLRHVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
AM +M AGLA +GG LKM++SYVD+LP+G+EKGLFYALDLGGTNFRVLRVQLGG++ R
Sbjct: 61 AMAADMRAGLAVDGGGDLKMILSYVDSLPSGNEKGLFYALDLGGTNFRVLRVQLGGKDER 120
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
V+ EFE+VSIP LM G+S ELFD+IA+ LA FVA EG FH+ GR+RE+GFTFSFPV
Sbjct: 121 VIATEFEQVSIPQELMFGTSEELFDFIASGLANFVAKEGGKFHLPEGRKREIGFTFSFPV 180
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
+QTSI SG L+KWTKGF++ T G+DVV L +AMER GLDMRV+ALVNDT+GTLAG RY
Sbjct: 181 KQTSIDSGILMKWTKGFAVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARY 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGL-------------------LPKS----- 276
+ D + AVILGTGTNA YVER AIPK G LP +
Sbjct: 241 WDDDVMVAVILGTGTNACYVERTDAIPKLQGQKSSSGRTIINTEWGAFSDGLPLTEFDRE 300
Query: 277 --------GEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMS 328
GE IFEK ISGMYLGEIVRRVL +MAE ++ FG VP KL PF LRTPH+
Sbjct: 301 MDAASINPGEQIFEKTISGMYLGEIVRRVLLKMAETSDLFGHFVPEKLSTPFALRTPHLC 360
Query: 329 AMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKL 388
AM D S DL+ VG L D+L + SL R+ VVE+CD + RG RL+ AGIVGIL+K+
Sbjct: 361 AMQQDNSDDLQAVGSILYDVLGVE-ASLSARRRVVEVCDTIVKRGGRLAGAGIVGILEKM 419
Query: 389 GRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 448
D+ +++V+A+DGGL+E Y ++ MQ V ELLG E+S+ + IEH+ DGSGIG
Sbjct: 420 EEDSKGMIFGKRTVVAMDGGLYEKYPQYRRYMQDAVTELLGLELSKNIAIEHTKDGSGIG 479
Query: 449 AALLAASHSQY 459
AALLAA++S+Y
Sbjct: 480 AALLAATNSKY 490
|
Length = 490 |
| >gnl|CDD|178206 PLN02596, PLN02596, hexokinase-like | Back alignment and domain information |
|---|
Score = 494 bits (1274), Expect = e-173
Identities = 243/491 (49%), Positives = 321/491 (65%), Gaps = 39/491 (7%)
Query: 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVAD 60
M K V A V A AAA L+ R + + +W IL++ +C TP+ KL +VAD
Sbjct: 2 MRKEVVVAATVATVAAVAAAVLMGRWKRRKERQWKHTQRILRKFARECATPVSKLWEVAD 61
Query: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGR 120
A+ +M A L +E + L ML+SYV +LP+GDEKGL+Y L+L G+NF +LR +LGG+
Sbjct: 62 ALVSDMTASLTAEETTTLNMLVSYVASLPSGDEKGLYYGLNLRGSNFLLLRARLGGKNEP 121
Query: 121 VVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPV 180
+ EE+SIP +++ G+S ELFDYIA LAKFVA +P R ++LGFT S+PV
Sbjct: 122 ISDLYREEISIPSNVLNGTSQELFDYIALELAKFVAEHPGDEADTPERVKKLGFTVSYPV 181
Query: 181 RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240
Q + +SG IKW K FS +DTVG+ +V ++ +A+E+ GL +RV ALV+DTIG LAGGRY
Sbjct: 182 DQAAASSGSAIKW-KSFSADDTVGKALVNDINRALEKHGLKIRVFALVDDTIGNLAGGRY 240
Query: 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM--------------------- 279
+NKD +AAV LG GTNAAYVE A AIPKW P+S E+
Sbjct: 241 YNKDTVAAVTLGMGTNAAYVEPAQAIPKWQSPSPESQEIVISTEWGNFNSCHLPITEFDA 300
Query: 280 ------------IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM 327
IFEK+ SGMYLGEIVRRVL +MAEE FGDT+PPKL P++LR+P M
Sbjct: 301 SLDAESSNPGSRIFEKLTSGMYLGEIVRRVLLKMAEETALFGDTLPPKLTTPYLLRSPDM 360
Query: 328 SAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387
+AMH DTS D VV +KLK+I I++++ R++V E+CDIVA RGARL+ AGIVGI+KK
Sbjct: 361 AAMHQDTSEDHEVVNEKLKEIFGITDSTPMAREVVAEVCDIVAERGARLAGAGIVGIIKK 420
Query: 388 LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGI 447
LGR E +KSV+ ++GGL+EHY F + S+V E+LG E+S+ VVIEHS+ GSG
Sbjct: 421 LGRI-----ENKKSVVTVEGGLYEHYRVFRNYLHSSVWEMLGSELSDNVVIEHSHGGSGA 475
Query: 448 GAALLAASHSQ 458
GA LAA +
Sbjct: 476 GALFLAACQTG 486
|
Length = 490 |
| >gnl|CDD|227359 COG5026, COG5026, Hexokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 273 bits (699), Expect = 8e-87
Identities = 161/465 (34%), Positives = 226/465 (48%), Gaps = 49/465 (10%)
Query: 27 RMKSTGRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVD 86
+ G A ++E+ E P LR+V A E+ GL + G L M+ ++V
Sbjct: 7 HKGTLGVEAALEQAVEELVESFTVPTEDLREVVKAFIEELEKGLQPKSGDFLPMIPTWVA 66
Query: 87 NLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDY 146
LPTG+E G A+DLGGTN RV V LGG +G ++ + + S ELF +
Sbjct: 67 PLPTGNESGSVLAIDLGGTNLRVCLVVLGG-DGTFDIEQSKSFLPVECRDSESRDELFGF 125
Query: 147 IAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGED 206
IA LA F+ E G + +GFTFS+P+ QTSI G LI+WTKGF I + +G D
Sbjct: 126 IADRLAAFI---KEQHPSGYGSKLPIGFTFSYPLNQTSINEGQLIRWTKGFDIPEVIGTD 182
Query: 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAI 266
VV L +A+ L +RV A++NDT GTL Y + + I +I GTGTN Y E I
Sbjct: 183 VVRLLQEALSARNLPIRVVAVINDTTGTLLASVYTSSETIIGIIFGTGTNGCYCEPKGRI 242
Query: 267 PKWHG-LLPKSGEM-----------------------------------IFEKIISGMYL 290
PK LP++G M IFEK+ SGMYL
Sbjct: 243 PKLPRDDLPETGPMLINCEWGSFDNELSVLPRTKYDVLIDQESPNPGHQIFEKMSSGMYL 302
Query: 291 GEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILE 350
GE++R +L + E+ F P KL PF L T +S + D +LR +
Sbjct: 303 GELLRLILRNLYEQGLIFNGQDPEKLTDPFALSTSVLSRIEEDPFENLRNTLTTFLNDFR 362
Query: 351 ISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLF 410
T+ + RKL+ L +++ R ARL+A I I+ K G + + DG +
Sbjct: 363 A-PTTKEERKLIRRLVELIGRRAARLAAVPIAAIVIKTGA-------YKAYHVGADGSVI 414
Query: 411 EHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAAS 455
E Y F + ++ +K LLGEE E + I+ + DGSG+GAAL A
Sbjct: 415 ERYPGFRSMLREALKALLGEE-GEKIKIKPAEDGSGLGAALCALL 458
|
Length = 466 |
| >gnl|CDD|240270 PTZ00107, PTZ00107, hexokinase; Provisional | Back alignment and domain information |
|---|
Score = 263 bits (675), Expect = 3e-83
Identities = 142/455 (31%), Positives = 217/455 (47%), Gaps = 74/455 (16%)
Query: 54 KLRQVADAMTVEMHAGLASEGG---------SKLKMLISYVDNLPTGDEKGLFYALDLGG 104
KL+++ D E+ GL + KML S V NLPTG EKG++YA+D GG
Sbjct: 24 KLKELVDYFLYELVEGLEAHRRHRNLWIPNECSFKMLDSCVYNLPTGKEKGVYYAIDFGG 83
Query: 105 TNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTG---------SSHELFDYIAAALAKFV 155
TNFR +RV L R G +++ + S+P + G ++ +LFD+IA ++ K +
Sbjct: 84 TNFRAVRVSL--RGGGKMERTQSKFSLPKSALLGEKGLLDKKATATDLFDHIAKSIKKMM 141
Query: 156 ATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFS----IEDTV-GEDVVGE 210
E G + +GFTFSFP Q S+ + LI WTKGF D V G+DV
Sbjct: 142 --EENGDPEDLNKPVPVGFTFSFPCTQLSVNNAILIDWTKGFETGRATNDPVEGKDVGEL 199
Query: 211 LTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAVILGTGTNAAYVERAHAI 266
L A +R + V A++NDT+GTL Y + VI+GTG+NA Y E +
Sbjct: 200 LNDAFKRNNVPANVVAVLNDTVGTLISCAYQKPKNTPPCQVGVIIGTGSNACYFEPEVSA 259
Query: 267 PKWHG------------LLPKS-------------GEMIFEKIISGMYLGEIVRRVLCRM 301
+ G LP + G FEK+ISG YLGEI RR++
Sbjct: 260 YGYAGTPINMECGNFDSKLPITPYDLEMDWYTPNRGRQQFEKMISGAYLGEISRRLI--- 316
Query: 302 AEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDI--LEISNTSLKMR 359
+ PPK+ + S + +D SPDL+ + +K+ +++++ L
Sbjct: 317 ---VHLLQLKAPPKMWQSGSFESEDASMILNDQSPDLQFSRQVIKEAWDVDLTDEDLYTI 373
Query: 360 KLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSAC 419
+ ++C++V R A+L+AA I KK K+ +A+DG ++ F
Sbjct: 374 R---KICELVRGRAAQLAAAFIAAPAKKTRTVQ------GKATVAIDGSVYVKNPWFRRL 424
Query: 420 MQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAA 454
+Q + +LG + V ++DGSG GAA++AA
Sbjct: 425 LQEYINSILGPDAGNVVFYL-ADDGSGKGAAIIAA 458
|
Length = 464 |
| >gnl|CDD|201171 pfam00349, Hexokinase_1, Hexokinase | Back alignment and domain information |
|---|
Score = 198 bits (505), Expect = 2e-61
Identities = 88/191 (46%), Positives = 114/191 (59%), Gaps = 10/191 (5%)
Query: 54 KLRQVADAMTVEMHAGLASEGGS--KLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLR 111
LR+V EM GL+ EGG+ + ML ++V + PTG EKG F ALDLGGTNFRVL
Sbjct: 19 TLREVVKRFISEMEKGLSKEGGNLAAVPMLPTFVRSTPTGTEKGDFLALDLGGTNFRVLL 78
Query: 112 VQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR- 170
V+L G V+ + +P LMTG+ +LFD+IA L F+ + ++
Sbjct: 79 VKLTG--NGKVEMTQSKYRLPEELMTGTGEQLFDFIADCLKDFM----DEQFPLGKKEPL 132
Query: 171 ELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGL-DMRVAALVN 229
LGFTFSFP QTSI G LI+WTKGF I G DVV L +A++R G+ D+ V A+VN
Sbjct: 133 PLGFTFSFPCSQTSINEGILIRWTKGFKISGVEGHDVVPLLQEAIKRRGIPDIDVVAVVN 192
Query: 230 DTIGTLAGGRY 240
DT+GTL Y
Sbjct: 193 DTVGTLMACAY 203
|
Hexokinase (EC:2.7.1.1) contains two structurally similar domains represented by this family and pfam03727. Some members of the family have two copies of each of these domains. Length = 205 |
| >gnl|CDD|202746 pfam03727, Hexokinase_2, Hexokinase | Back alignment and domain information |
|---|
Score = 161 bits (410), Expect = 7e-47
Identities = 79/238 (33%), Positives = 115/238 (48%), Gaps = 39/238 (16%)
Query: 249 VILGTGTNAAYVERAHAIPKWHG--------------------------------LLPKS 276
+I+GTGTNA Y+E I K G P
Sbjct: 6 LIVGTGTNACYMEEMRNIEKLEGDDGRMCINMEWGAFDNGHLDLPRTKYDVVIDEESPNP 65
Query: 277 GEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSP 336
G+ FEK+ISGMYLGEIVR +L +A++ F PKL P T +S + D S
Sbjct: 66 GQQRFEKMISGMYLGEIVRLILLDLAKQGLLFKGQDSPKLLTPGSFETSVLSRIESD-SE 124
Query: 337 DLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDG 396
+L V L+ L + T+ + RKLV +C+ V+TR ARL AAG+ IL+K+ + +
Sbjct: 125 NLEDVRAILQTALGL-ETTDEERKLVRRVCEAVSTRAARLCAAGLAAILQKIRENRGYEH 183
Query: 397 EKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAA 454
K + +DG +++ Y F + T+++L + V + DGSG GAAL+AA
Sbjct: 184 --LKVTVGVDGSVYKLYPGFKERLAETLRDLAPDCD---VSFIPAEDGSGKGAALVAA 236
|
Hexokinase (EC:2.7.1.1) contains two structurally similar domains represented by this family and pfam00349. Some members of the family have two copies of each of these domains. Length = 238 |
| >gnl|CDD|212657 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 3e-05
Identities = 33/193 (17%), Positives = 65/193 (33%), Gaps = 34/193 (17%)
Query: 99 ALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATE 158
+D+G T+ + + +G ++ +E + EL + + L + +
Sbjct: 2 GIDIGSTST---KAGVADLDGEILPEEIVPTPVGRPGAVTDLDELEEALRELLKEALRQL 58
Query: 159 GEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI 218
+G T V + + L ++ L A+E +
Sbjct: 59 KSEID-------AVGITEPGGVPKENREVIILPNL-------------LLIPLALALEDL 98
Query: 219 GLDMRVAALVNDTIGTLAGGRYHNKDA--IAAVILGTG-TNAAYVERAHAIPKWHGLLPK 275
G A+VND + K+ + V LGTG T A VE G +
Sbjct: 99 GGV--PVAVVNDAVAAALAEGLFGKEEDTVLVVDLGTGTTGIAIVE------DGKGGVGA 150
Query: 276 SGEMIFEKIISGM 288
+GE+ + ++ +
Sbjct: 151 AGELGIAEALAAV 163
|
This superfamily includes the actin family, the HSP70 family of molecular chaperones and nucleotide exchange factors, the ROK (repressor, ORF, kinase) family, the hexokinase family, the FGGY family (which includes glycerol kinase and similar carbohydrate kinases such as rhamnulokinase and xylulokinase), the exopolyphosphatase/guanosine pentaphosphate phosphohydrolase/nucleoside triphosphate diphosphohydrolase family, propionate kinase/acetate kinase family, glycerol dehydratase reactivase, 2-hydroxyglutaryl-CoA dehydratase component A, N-acetylglucosamine kinase, butyrate kinase 2, Escherichia coli YeaZ and similar glycoproteases, the cell shape-determining protein MreB, the plasmid DNA segregation factor ParM, cell cycle proteins FtsA, Pili assembly protein PilM, ethanolamine utilization protein EutJ, and similar proteins. The nucleotide-binding site residues are conserved; the nucleotide sits in a deep cleft formed between the two lobes of the nucleotide-binding domain (NBD). Substrate binding to superfamily members is associated with closure of this catalytic site cleft. The functional activities of several members of the superfamily, including hexokinases, actin, and HSP70s, are modulated by allosteric effectors, which may act on the cleft closure. Length = 185 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 465 | |||
| PLN02405 | 497 | hexokinase | 100.0 | |
| PLN02596 | 490 | hexokinase-like | 100.0 | |
| PLN02362 | 509 | hexokinase | 100.0 | |
| PLN02914 | 490 | hexokinase | 100.0 | |
| KOG1369 | 474 | consensus Hexokinase [Carbohydrate transport and m | 100.0 | |
| PTZ00107 | 464 | hexokinase; Provisional | 100.0 | |
| COG5026 | 466 | Hexokinase [Carbohydrate transport and metabolism] | 100.0 | |
| PF00349 | 206 | Hexokinase_1: Hexokinase; InterPro: IPR022672 Hexo | 100.0 | |
| PF03727 | 243 | Hexokinase_2: Hexokinase; InterPro: IPR022673 Hexo | 100.0 | |
| PRK13310 | 303 | N-acetyl-D-glucosamine kinase; Provisional | 99.94 | |
| TIGR00744 | 318 | ROK_glcA_fam ROK family protein (putative glucokin | 99.93 | |
| PRK09698 | 302 | D-allose kinase; Provisional | 99.92 | |
| PRK09557 | 301 | fructokinase; Reviewed | 99.92 | |
| PRK05082 | 291 | N-acetylmannosamine kinase; Provisional | 99.91 | |
| COG1940 | 314 | NagC Transcriptional regulator/sugar kinase [Trans | 99.91 | |
| PRK12408 | 336 | glucokinase; Provisional | 99.89 | |
| PRK00292 | 316 | glk glucokinase; Provisional | 99.88 | |
| PRK13311 | 256 | N-acetyl-D-glucosamine kinase; Provisional | 99.82 | |
| PRK14101 | 638 | bifunctional glucokinase/RpiR family transcription | 99.8 | |
| TIGR00749 | 316 | glk glucokinase, proteobacterial type. This model | 99.77 | |
| PF00480 | 179 | ROK: ROK family; InterPro: IPR000600 A family of b | 99.66 | |
| PTZ00288 | 405 | glucokinase 1; Provisional | 99.52 | |
| PF01869 | 271 | BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In | 99.3 | |
| KOG1794 | 336 | consensus N-Acetylglucosamine kinase [Carbohydrate | 99.26 | |
| PF02685 | 316 | Glucokinase: Glucokinase; InterPro: IPR003836 Gluc | 99.01 | |
| TIGR02707 | 351 | butyr_kinase butyrate kinase. This model represent | 98.99 | |
| PRK03011 | 358 | butyrate kinase; Provisional | 98.9 | |
| smart00732 | 99 | YqgFc Likely ribonuclease with RNase H fold. YqgF | 98.82 | |
| COG2971 | 301 | Predicted N-acetylglucosamine kinase [Carbohydrate | 98.65 | |
| COG0837 | 320 | Glk Glucokinase [Carbohydrate transport and metabo | 98.22 | |
| PRK00976 | 326 | hypothetical protein; Provisional | 98.14 | |
| PRK13318 | 258 | pantothenate kinase; Reviewed | 97.67 | |
| PF00370 | 245 | FGGY_N: FGGY family of carbohydrate kinases, N-ter | 97.28 | |
| TIGR01312 | 481 | XylB D-xylulose kinase. D-xylulose kinase (XylB) g | 97.21 | |
| TIGR00241 | 248 | CoA_E_activ CoA-substrate-specific enzyme activase | 97.14 | |
| TIGR03286 | 404 | methan_mark_15 putative methanogenesis marker prot | 96.66 | |
| PRK13321 | 256 | pantothenate kinase; Reviewed | 96.61 | |
| TIGR01315 | 541 | 5C_CHO_kinase FGGY-family pentulose kinase. This m | 96.59 | |
| TIGR01314 | 505 | gntK_FGGY gluconate kinase, FGGY type. Gluconate i | 96.47 | |
| TIGR01311 | 493 | glycerol_kin glycerol kinase. This model describes | 96.47 | |
| PRK10939 | 520 | autoinducer-2 (AI-2) kinase; Provisional | 96.31 | |
| PRK00047 | 498 | glpK glycerol kinase; Provisional | 96.3 | |
| TIGR01234 | 536 | L-ribulokinase L-ribulokinase. This enzyme catalyz | 96.27 | |
| PRK15027 | 484 | xylulokinase; Provisional | 96.24 | |
| PRK10331 | 470 | L-fuculokinase; Provisional | 95.97 | |
| PTZ00294 | 504 | glycerol kinase-like protein; Provisional | 95.8 | |
| COG1070 | 502 | XylB Sugar (pentulose and hexulose) kinases [Carbo | 95.79 | |
| PRK13317 | 277 | pantothenate kinase; Provisional | 95.77 | |
| PLN02295 | 512 | glycerol kinase | 95.61 | |
| TIGR00555 | 279 | panK_eukar pantothenate kinase, eukaryotic/staphyl | 95.54 | |
| TIGR02628 | 465 | fuculo_kin_coli L-fuculokinase. Members of this fa | 95.53 | |
| PRK04123 | 548 | ribulokinase; Provisional | 95.52 | |
| TIGR03192 | 293 | benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s | 95.46 | |
| COG1924 | 396 | Activator of 2-hydroxyglutaryl-CoA dehydratase (HS | 94.06 | |
| PTZ00009 | 653 | heat shock 70 kDa protein; Provisional | 93.8 | |
| KOG2517 | 516 | consensus Ribulose kinase and related carbohydrate | 93.59 | |
| PF07318 | 343 | DUF1464: Protein of unknown function (DUF1464); In | 93.51 | |
| PLN02669 | 556 | xylulokinase | 93.16 | |
| PF00012 | 602 | HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho | 92.33 | |
| PF02782 | 198 | FGGY_C: FGGY family of carbohydrate kinases, C-ter | 91.67 | |
| COG0554 | 499 | GlpK Glycerol kinase [Energy production and conver | 91.08 | |
| TIGR01174 | 371 | ftsA cell division protein FtsA. This bacterial ce | 90.68 | |
| TIGR02627 | 454 | rhamnulo_kin rhamnulokinase. This model describes | 90.27 | |
| TIGR01175 | 348 | pilM type IV pilus assembly protein PilM. This pro | 90.02 | |
| COG1069 | 544 | AraB Ribulose kinase [Energy production and conver | 89.84 | |
| KOG0104 | 902 | consensus Molecular chaperones GRP170/SIL1, HSP70 | 87.93 | |
| KOG2517 | 516 | consensus Ribulose kinase and related carbohydrate | 86.62 | |
| PRK15080 | 267 | ethanolamine utilization protein EutJ; Provisional | 85.85 | |
| COG4972 | 354 | PilM Tfp pilus assembly protein, ATPase PilM [Cell | 82.14 | |
| PRK09472 | 420 | ftsA cell division protein FtsA; Reviewed | 80.15 |
| >PLN02405 hexokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-117 Score=927.66 Aligned_cols=464 Identities=87% Similarity=1.310 Sum_probs=425.9
Q ss_pred CCceeeeeehhhHHHHHHHHHHHHhhhhccchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcce
Q 012386 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKM 80 (465)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~~~s~~~M 80 (465)
|+|+.+++++++++++|++++..+++++++..+|.++.+++++++++|.+|.++|++|+++|..||++||+++++|+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~f~~~~~~L~~v~~~f~~em~~GL~~~~~s~l~M 80 (497)
T PLN02405 1 MGKVAVGAAVVCAAAVCAAAALVVRRRMKSSGKWARAMEILKEFEEDCATPIGKLRQVADAMTVEMHAGLASEGGSKLKM 80 (497)
T ss_pred CCceeeehhhhhHHHHHHHHHHhhhcccccchhhhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhccCCCCCcce
Confidence 78878888888888888888889998888777888999999999999999999999999999999999999876789999
Q ss_pred eccccccCCCCCcceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCC
Q 012386 81 LISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGE 160 (465)
Q Consensus 81 lpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~ 160 (465)
|||||+++|||+|+|.|||||||||||||++|+|.|++..++.+.+++++||+++|.+++++||||||+||.+|+++++.
T Consensus 81 lpSyv~~lPtG~E~G~flAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~ip~~~~~gt~~~LFdfIA~~i~~fl~~~~~ 160 (497)
T PLN02405 81 LISYVDNLPSGDEKGLFYALDLGGTNFRVLRVLLGGKDGRVVKQEFEEVSIPPHLMTGSSDALFDFIAAALAKFVATEGE 160 (497)
T ss_pred eccccccCCCCCcceeEEEEecCCceEEEEEEEEcCCCCceeEEEEEEeecChhhccCCHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999875556676777999999999999999999999999999998764
Q ss_pred CCCCCCCCcceeeeeeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccc
Q 012386 161 GFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240 (465)
Q Consensus 161 ~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y 240 (465)
+.....++.+++|||||||++|+++++|+|++|||||++++++|+||+++|+++|+|+|+||+|+||+|||||||++++|
T Consensus 161 ~~~~~~~~~l~LGfTFSFPv~Qtsi~~g~Li~WTKGF~~~~~vG~DVv~lL~~Al~r~~l~v~v~AlvNDTVGTL~a~aY 240 (497)
T PLN02405 161 DFHLPPGRQRELGFTFSFPVKQTSISSGTLIKWTKGFSIDDAVGQDVVGELTKAMERVGLDMRVSALVNDTIGTLAGGRY 240 (497)
T ss_pred ccccCcccccccceeEeeeeccCCCCceEEEEeccccccCCccCchHHHHHHHHHHHcCCCceEEEEEecCHHHHHHhhc
Confidence 43222346799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceEEEEEEccccceeEEccCCCCcccCCCC---------------------------------CCCCceeeeehhcc
Q 012386 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLL---------------------------------PKSGEMIFEKIISG 287 (465)
Q Consensus 241 ~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~---------------------------------~~~g~~~fEkm~SG 287 (465)
.++++.||+|+|||+|+||+|+.+.||||++.. .++|.++||||+||
T Consensus 241 ~~~~~~iG~IlGTGtNacY~E~~~~i~k~~~~~~~~~~miINtEwG~F~~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG 320 (497)
T PLN02405 241 YNPDVVAAVILGTGTNAAYVERAQAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDHALDVESLNPGEQIFEKIISG 320 (497)
T ss_pred CCCCceEEEEEeCCeeeEEEeecccCccccccCCCCCeEEEEeccccCCCCCCCCchHHHHHhhcCCCCCcchhhHHHhh
Confidence 999999999999999999999999999985421 13455699999999
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHH
Q 012386 288 MYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCD 367 (465)
Q Consensus 288 ~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~ 367 (465)
||||||+|++|+++++++.||++..|+.|.+||+|+|++||.|+.|++++++.+.+++++.|+++..+.+|++.+++||+
T Consensus 321 ~YLGEivRlvLl~l~~~~~lF~g~~~~~L~~~~~l~T~~ls~i~~D~s~~l~~~~~~l~~~l~~~~~~~~~~~~vr~i~~ 400 (497)
T PLN02405 321 MYLGEILRRVLLKMAEEAAFFGDTVPPKLKIPFILRTPDMSAMHHDTSPDLKVVGSKLKDILEIPNTSLKMRKVVVELCN 400 (497)
T ss_pred ccHHHHHHHHHHHHHHhccccCCCCcHhhcCCCCcccHHHHHHhcCCCchHHHHHHHHHHHcCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999899999999999999999999999999999999999999998888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHH
Q 012386 368 IVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGI 447 (465)
Q Consensus 368 ~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~i 447 (465)
.|.+|||||+|++|+||++++++........++++|++|||+|++||.|+++++++++++++++..++|+|++++||||+
T Consensus 401 ~V~~RAArL~Aa~iaail~k~~~~~~~~~~~~~~~VavDGsvye~yp~f~~~~~~~l~ell~~~~~~~v~l~~a~DGSGv 480 (497)
T PLN02405 401 IVATRGARLSAAGIYGILKKLGRDTVKDGEKQKSVIAMDGGLFEHYTEFSKCMESTLKELLGEEVSESIEVEHSNDGSGI 480 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccccccCCCcceEEEEeCchhhcCcCHHHHHHHHHHHHhCcccCceEEEEEecCchHH
Confidence 99999999999999999999987421111124689999999999999999999999999998766778999999999999
Q ss_pred HHHHHHHHhcccchhcc
Q 012386 448 GAALLAASHSQYLEVEE 464 (465)
Q Consensus 448 GAAl~Aa~~~~~~~~~~ 464 (465)
|||++||++++|++|||
T Consensus 481 GAAl~AA~~~~~~~~~~ 497 (497)
T PLN02405 481 GAALLAASHSLYLEVEE 497 (497)
T ss_pred HHHHHHHHHhhhhcccC
Confidence 99999999999988886
|
|
| >PLN02596 hexokinase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-114 Score=898.78 Aligned_cols=451 Identities=53% Similarity=0.883 Sum_probs=415.3
Q ss_pred CCceeeeeehhhHHHHHHHHHHHHhhhh-ccchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcc
Q 012386 1 MGKVTVAATVVCAAAVCAAAALVVRRRM-KSTGRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLK 79 (465)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~~~s~~~ 79 (465)
|+|+.++++++|++++|++| +++.+|. +++.+|+++++++++|+++|.+|.++|++|+++|..||++||+++++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~~s~l~ 80 (490)
T PLN02596 2 MRKEVVVAATVATVAAVAAA-VLMGRWKRRKERQWKHTQRILRKFARECATPVSKLWEVADALVSDMTASLTAEETTTLN 80 (490)
T ss_pred CcceeeehhHHHHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhccCCCCCCc
Confidence 78888888888888888888 7888887 666899999999999999999999999999999999999999986668999
Q ss_pred eeccccccCCCCCcceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhC
Q 012386 80 MLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEG 159 (465)
Q Consensus 80 Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~ 159 (465)
||||||+++|||+|+|.|||||||||||||++|+|.|++..+....+++|+||++++.+++++||||||+||++|+++++
T Consensus 81 MlpTyv~~lPtG~E~G~yLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~Ip~~l~~~t~~eLFd~IA~~i~~fl~~~~ 160 (490)
T PLN02596 81 MLVSYVASLPSGDEKGLYYGLNLRGSNFLLLRARLGGKNEPISDLYREEISIPSNVLNGTSQELFDYIALELAKFVAEHP 160 (490)
T ss_pred eecccCCCCCCCCcceEEEEEeeCCceEEEEEEEEcCCCCceEEEEEEEecCChHhhcCCHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999886544566666789999999999999999999999999999876
Q ss_pred CCCCCCCCCcceeeeeeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccc
Q 012386 160 EGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGR 239 (465)
Q Consensus 160 ~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~ 239 (465)
.+.....++.+++|||||||++|+++++|+|++| |||++++++|+||+++|+++++|+|+||+|+||+|||||||++++
T Consensus 161 ~~~~~~~~~~l~lGfTFSFP~~Q~si~~G~Li~W-KgF~~~~~vG~Dvv~lL~~Al~r~~l~v~v~AivNDTVgTL~a~a 239 (490)
T PLN02596 161 GDEADTPERVKKLGFTVSYPVDQAAASSGSAIKW-KSFSADDTVGKALVNDINRALEKHGLKIRVFALVDDTIGNLAGGR 239 (490)
T ss_pred cccccCcccccccceEEeeeeeecCCCCEEEEEe-ccccCCCccCcHHHHHHHHHHHhcCCCceEEEEEEcCHHHHHhhh
Confidence 4332222457999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred ccCCceEEEEEEccccceeEEccCCCCcccCCCC---------------------------------CCCCceeeeehhc
Q 012386 240 YHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLL---------------------------------PKSGEMIFEKIIS 286 (465)
Q Consensus 240 y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~---------------------------------~~~g~~~fEkm~S 286 (465)
|.++++.||+|+|||+|+||+|+.+.|+||++.. +++|.++||||+|
T Consensus 240 Y~~~~~~iG~I~GTGtNacY~E~~~~i~k~~~~~~~~~~miINtEwG~F~~~~lp~T~~D~~lD~~S~nPG~Q~fEKMiS 319 (490)
T PLN02596 240 YYNKDTVAAVTLGMGTNAAYVEPAQAIPKWQSPSPESQEIVISTEWGNFNSCHLPITEFDASLDAESSNPGSRIFEKLTS 319 (490)
T ss_pred cCCCCeEEEEEEecccceEEEEEccccccccCCCCCCCeEEEEeccccCCCCCCCCChHHHHHhccCCCCCcchHHHHHh
Confidence 9999999999999999999999999999885311 1356679999999
Q ss_pred cccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHH
Q 012386 287 GMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELC 366 (465)
Q Consensus 287 G~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia 366 (465)
|||||||+|++++++++++.||++..|+.|.++|+|+|++||.++.|++++++.+.++|++.|+++.++.+|++.+++||
T Consensus 320 G~YLGElvRlvl~~l~~~~~lF~~~~~~~L~~~~~l~T~~lS~i~~d~s~~~~~~~~~l~~~l~~~~~~~~d~~~lr~i~ 399 (490)
T PLN02596 320 GMYLGEIVRRVLLKMAEETALFGDTLPPKLTTPYLLRSPDMAAMHQDTSEDHEVVNEKLKEIFGITDSTPMAREVVAEVC 399 (490)
T ss_pred hhhHHHHHHHHHHHHHHhccccCCCCcHhhcCCCccccHHHHHHhcCCCchHHHHHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999988999999999999999999999999999999999999999888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhH
Q 012386 367 DIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSG 446 (465)
Q Consensus 367 ~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~ 446 (465)
++|.+|||||+|++|+||++++++. ..++++|++|||+|++||.|+++++++++++++++...+|.|.+++||||
T Consensus 400 ~~V~~RAArL~Aa~iaail~k~g~~-----~~~~~~VavDGSvye~~p~f~~~l~~al~ellg~~~~~~i~~~~s~DGSG 474 (490)
T PLN02596 400 DIVAERGARLAGAGIVGIIKKLGRI-----ENKKSVVTVEGGLYEHYRVFRNYLHSSVWEMLGSELSDNVVIEHSHGGSG 474 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC-----CCCceEEEEeCcceeeCcCHHHHHHHHHHHHhCcccCCcEEEEEccCchh
Confidence 9999999999999999999999863 12468999999999999999999999999999887777999999999999
Q ss_pred HHHHHHHHHhcc
Q 012386 447 IGAALLAASHSQ 458 (465)
Q Consensus 447 iGAAl~Aa~~~~ 458 (465)
+|||++||++++
T Consensus 475 ~GAAl~AA~~~~ 486 (490)
T PLN02596 475 AGALFLAACQTG 486 (490)
T ss_pred HHHHHHHHhhcc
Confidence 999999999984
|
|
| >PLN02362 hexokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-114 Score=905.12 Aligned_cols=459 Identities=59% Similarity=0.964 Sum_probs=417.9
Q ss_pred CCceeeeeehhhHHHHHHHHHHHHhhhhccchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcce
Q 012386 1 MGKVTVAATVVCAAAVCAAAALVVRRRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKM 80 (465)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~~~s~~~M 80 (465)
|+|+.+++++++++++|++++..+++++++..+|.++.+.+++|+++|.+|.++|++|+++|..||++||+++++|+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~f~~~~~~L~~v~~~f~~em~~GL~~~~~s~l~M 80 (509)
T PLN02362 1 MGKVAVGLAAAAAVAACAVAAVMVGRRVKSRRKWRRVVGVLKELEEACETPVGRLRQVVDAMAVEMHAGLASEGGSKLKM 80 (509)
T ss_pred CCceeeehhhhHHHHHHHHHHHhhhcccccchhhhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhccCCCCCCce
Confidence 78877788788877778888888888888777889999999999999999999999999999999999999876689999
Q ss_pred eccccccCCCCCcceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCC
Q 012386 81 LISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGE 160 (465)
Q Consensus 81 lpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~ 160 (465)
|||||+++|||+|+|.|||||||||||||++|+|.|++...+.+++++|+||+++|.+++++||||||+||.+|+++++.
T Consensus 81 lPTyv~~lPtG~E~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~Ip~~l~~~~~~eLFd~IA~~i~~fl~~~~~ 160 (509)
T PLN02362 81 LLTFVDDLPTGSEIGTYYALDLGGTNFRVLRVQLGGQRSSILSQDVERHPIPQHLMNSTSEVLFDFIASSLKQFVEKEEN 160 (509)
T ss_pred ecCccCCCCCCCcceeEEEEecCCceEEEEEEEecCCCcceeeceeEEEecChhhccCCHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999876556555556899999999999999999999999999998764
Q ss_pred CCCCCCCCcceeeeeeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccc
Q 012386 161 GFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240 (465)
Q Consensus 161 ~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y 240 (465)
+.+....+.+++|||||||++|+++++|+|++|||||++++++|+||+++|+++|+|+++||+|+||+|||||||++++|
T Consensus 161 ~~~~~~~~~l~LGfTFSFPv~Q~si~~g~Li~WtKGF~~~~v~G~DVv~lL~~Al~r~~l~v~v~AlvNDTVgTL~a~aY 240 (509)
T PLN02362 161 GSEFSQVRRRELGFTFSFPVKQTSISSGILIKWTKGFAISDMVGKDVAECLQGALNRRGLDMRVAALVNDTVGTLALGHY 240 (509)
T ss_pred cccccccccccceeEEeeeeccCCCCceEEEEeccccccCcccCchHHHHHHHHHHHcCCCcEEEEEEEcCHHHHHhhhc
Confidence 32222235799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceEEEEEEccccceeEEccCCCCcccCCCC---------------------------------CCCCceeeeehhcc
Q 012386 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLL---------------------------------PKSGEMIFEKIISG 287 (465)
Q Consensus 241 ~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~---------------------------------~~~g~~~fEkm~SG 287 (465)
.++++.||+|+|||+|+||+|+.+.|+||++.. +++|.++||||+||
T Consensus 241 ~~~~~~iG~IlGTGtNacY~E~~~~i~k~~~~~~~~~~miINtEwG~F~~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG 320 (509)
T PLN02362 241 HDPDTVAAVIIGTGTNACYLERTDAIIKCQGLLTTSGSMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISG 320 (509)
T ss_pred CCCCceEEEEEECCccceEeeehhhcccccccCCCCCcEEEEeeccCCCCCCCCCchHHHHHhcCCCCcCcchHHHHHhh
Confidence 999999999999999999999999998885421 13566799999999
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHH
Q 012386 288 MYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCD 367 (465)
Q Consensus 288 ~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~ 367 (465)
||||||+|++|++|++++.||++ .|++|.+||+|+|++||.|+.|++++++.+.++|++.++++.++.+|++.+++||+
T Consensus 321 ~YLGEivRlvL~~l~~~~~lF~~-~~~~L~~~~~l~T~~ls~i~~d~s~~l~~~~~~l~~~~~~~~~~~~~~~~v~~i~~ 399 (509)
T PLN02362 321 MYLGDIVRRVILRMSQESDIFGP-VSSRLSTPFVLRTPSVAAMHEDDSPELQEVARILKETLGISEVPLKVRKLVVKICD 399 (509)
T ss_pred ccHHHHHHHHHHHHHhccccccC-CcHhhcCCCccccHHHHHHhcCCChhHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999985 68899999999999999999999999999999999999998889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcC-CC---------CCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEE
Q 012386 368 IVATRGARLSAAGIVGILKKLGRDTVR-DG---------EKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVV 437 (465)
Q Consensus 368 ~V~~RaA~l~aagiaaii~~~~~~~~~-~~---------~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~ 437 (465)
.|.+|||||+|++|+||++++++.... .. ..++++|++|||+|++||.|+++++++++++++++...+|.
T Consensus 400 ~V~~RaArL~Aa~iaail~k~~~~~~~~~~~~~~~~~~~~~~~~~VavDGsvye~yp~f~~~~~~~l~ell~~~~~~~v~ 479 (509)
T PLN02362 400 VVTRRAARLAAAGIVGILKKIGRDGSGGITSGRSRSDIQIMRRTVVAVEGGLYTNYTMFREYLHEALNEILGEDVAQHVI 479 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccccccCCCceEEEEEeCchhhcCcCHHHHHHHHHHHHhCcccCceEE
Confidence 999999999999999999999842110 00 12468999999999999999999999999999887778999
Q ss_pred EEEeCChhHHHHHHHHHHhcccc
Q 012386 438 IEHSNDGSGIGAALLAASHSQYL 460 (465)
Q Consensus 438 l~~a~Dgs~iGAAl~Aa~~~~~~ 460 (465)
|.+++|||++|||++||++++|.
T Consensus 480 i~~a~DGSgvGAAl~AA~~~~~~ 502 (509)
T PLN02362 480 LKATEDGSGIGSALLAASYSSYS 502 (509)
T ss_pred EEEccCchHHHHHHHHHHHHhhh
Confidence 99999999999999999999984
|
|
| >PLN02914 hexokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-110 Score=874.64 Aligned_cols=425 Identities=60% Similarity=0.989 Sum_probs=389.9
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeccccccCCCCCcceeEEEEEeCCceEEEEEEE
Q 012386 34 WARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQ 113 (465)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~~~s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V~ 113 (465)
..++.+.+++|+++|.+|.++|++|+++|.+||++||+++++|+++||||||.++|||+|+|.|||||||||||||++|+
T Consensus 34 ~~~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~~s~l~MlpTyv~~lPtG~E~G~fLAlDlGGTNfRV~~V~ 113 (490)
T PLN02914 34 AVSVAPILTKLQKDCATPLPVLRHVADAMAADMRAGLAVDGGGDLKMILSYVDSLPSGNEKGLFYALDLGGTNFRVLRVQ 113 (490)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhccCCCCCcceeccccCCCCCCCeeeEEEEEecCCceEEEEEEE
Confidence 34688899999999999999999999999999999999875689999999999999999999999999999999999999
Q ss_pred ecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEEecc
Q 012386 114 LGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKW 193 (465)
Q Consensus 114 l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li~w 193 (465)
|.|++..+....+++++||++++.+++++||||||+||++|++++..+...+.++.++||||||||++|+++++|+|++|
T Consensus 114 L~g~~~~~~~~~~~~~~ip~~l~~gt~~eLFdfIA~~i~~fl~~~~~~~~~~~~~~l~LGfTFSFP~~Q~si~~g~Li~W 193 (490)
T PLN02914 114 LGGKDERVIATEFEQVSIPQELMFGTSEELFDFIASGLANFVAKEGGKFHLPEGRKREIGFTFSFPVKQTSIDSGILMKW 193 (490)
T ss_pred ecCCCCceeeeeEEEecCChhhccCCHHHHHHHHHHHHHHHHHhccccccCCccccccceeeEeeeeecCCCCceEEEEe
Confidence 98875556666677999999999999999999999999999998764332223468999999999999999999999999
Q ss_pred CCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCCceEEEEEEccccceeEEccCCCCcccCCCC
Q 012386 194 TKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLL 273 (465)
Q Consensus 194 tKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~ 273 (465)
||||+++|++|+||+++|+++|+|+++||+|+||+|||||||++++|.++++.||+|+|||+|+||+|+.+.||||++..
T Consensus 194 TKGF~~~gv~G~DVv~lL~~Al~r~~l~v~v~AivNDTVGTL~a~aY~~~~~~iGlIlGTGtNacY~E~~~~i~k~~~~~ 273 (490)
T PLN02914 194 TKGFAVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDDDVMVAVILGTGTNACYVERTDAIPKLQGQK 273 (490)
T ss_pred ccccccCCccCchHHHHHHHHHHHcCCCceEEEEEEcCHHHHHhhhcCCCCceEEEEEECCeeeEEEeecccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999985421
Q ss_pred --------------------------------CCCCceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCc
Q 012386 274 --------------------------------PKSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFI 321 (465)
Q Consensus 274 --------------------------------~~~g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~ 321 (465)
+++|.++||||+||+|||||+|++|+++++++.||++..|+.|.++|+
T Consensus 274 ~~~~~miINtEwG~F~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRlvLl~l~~~~~lF~~~~~~~L~~~~~ 353 (490)
T PLN02914 274 SSSGRTIINTEWGAFSDGLPLTEFDREMDAASINPGEQIFEKTISGMYLGEIVRRVLLKMAETSDLFGHFVPEKLSTPFA 353 (490)
T ss_pred CCCceEEEeccccccCCCCCCChHHHHHhhCCCCCCcchhhhHHhhhhHHHHHHHHHHHHHHhcccccCCCcHhhcCCCc
Confidence 135667999999999999999999999999999999888999999999
Q ss_pred cCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceE
Q 012386 322 LRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKS 401 (465)
Q Consensus 322 l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~ 401 (465)
|+|++||.|+.|+++++..+.++|++.+++ +++.+|++.+++||++|.+|||||+|++|+||+++++.........+++
T Consensus 354 l~T~~ls~i~~D~s~~l~~~~~~l~~~~~~-~~~~~d~~~vr~i~~~V~~RAArL~Aa~iaail~k~~~~~~~~~~~~~~ 432 (490)
T PLN02914 354 LRTPHLCAMQQDNSDDLQAVGSILYDVLGV-EASLSARRRVVEVCDTIVKRGGRLAGAGIVGILEKMEEDSKGMIFGKRT 432 (490)
T ss_pred cccHHHHHHhcCCChhHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCceE
Confidence 999999999999999999999999999998 5899999999999999999999999999999999998631100112468
Q ss_pred EEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHHHHhccc
Q 012386 402 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQY 459 (465)
Q Consensus 402 ~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~Aa~~~~~ 459 (465)
+||+|||+|++||.|+++++++++++++++..++|+|++++||||+|||++||++++|
T Consensus 433 ~VavDGSv~~~~p~f~~~l~~~l~ellg~~~~~~i~i~~a~DGSGvGAAl~AA~~s~~ 490 (490)
T PLN02914 433 VVAMDGGLYEKYPQYRRYMQDAVTELLGLELSKNIAIEHTKDGSGIGAALLAATNSKY 490 (490)
T ss_pred EEEEeCchhhcCccHHHHHHHHHHHHhCcccCCcEEEEEccCchHHHHHHHHHHhhcC
Confidence 9999999999999999999999999998877779999999999999999999999976
|
|
| >KOG1369 consensus Hexokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-102 Score=795.73 Aligned_cols=415 Identities=46% Similarity=0.691 Sum_probs=383.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCC-CCcceeccccccCCCCCcceeEEEEEeCCceEEEE
Q 012386 32 GRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGG-SKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVL 110 (465)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~~~-s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~ 110 (465)
.++..+..+++++++.|.+|.++|++++++|.+||++||++... +.++||||||.++|+|+|+|.|||||||||||||+
T Consensus 22 ~~~~~~~~~l~~~~~~f~l~~~~L~~v~~~~~~em~~gL~~~~~g~~~~mlpt~V~~lP~G~E~G~~lalDLGGTn~Rv~ 101 (474)
T KOG1369|consen 22 SRLAAVSRQLEELLALFQLPDEQLREVVDAFREEMERGLAKKTHGSAVKMLPTYVPDLPDGTEKGKFLALDLGGTNFRVL 101 (474)
T ss_pred hhhhhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhhccCCCcccccchhhcccCCCCCcCCCEEEEecCCCceEEE
Confidence 47888999999999999999999999999999999999996443 44999999999999999999999999999999999
Q ss_pred EEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEE
Q 012386 111 RVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDL 190 (465)
Q Consensus 111 ~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~L 190 (465)
+|.++|++. ...+.+++|+||+++|++++++|||||++|+.+|+++++... ...+|+||||||||+|+++++|.|
T Consensus 102 ~v~L~g~~~-~~~~~~~~~~ip~~~m~gt~~~Lfd~Ia~~l~~F~~~~~~~~----~~~l~lgFTFSfP~~Q~si~~g~L 176 (474)
T KOG1369|consen 102 LVKLGGGRT-SVRMYNKIYAIPEEIMQGTGEELFDFIARCLADFLDKMGLKG----ASKLPLGFTFSFPCRQTSIDKGTL 176 (474)
T ss_pred EEEecCCcc-cceeeeeeEecCHHHHcCchHHHHHHHHHHHHHHHHHhcccc----ccccccceEEeeeeeecccccceE
Confidence 999988754 555566789999999999999999999999999999887542 122999999999999999999999
Q ss_pred eccCCccccCCCCCCcHHHHHHHHHHHcCCC-eeEEEEEechHHHhhcccccCCceEEEEEEccccceeEEccCCCCccc
Q 012386 191 IKWTKGFSIEDTVGEDVVGELTKAMERIGLD-MRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKW 269 (465)
Q Consensus 191 i~wtKgF~~~~~~g~dv~~~L~~al~~~gl~-v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~ 269 (465)
++|||||++++++|+||+++|+++|+|++++ +.|+|++||||||+++++|.+++|.||+|+|||||+||+|+..+|+++
T Consensus 177 ~~wTkGf~~~~~~g~Dvv~~L~eal~rr~~~~i~V~AlvNDTvGtl~~~~y~~~~~~igvI~GTGtNacY~e~~~~i~k~ 256 (474)
T KOG1369|consen 177 IRWTKGFKATDCEGEDVVRLLREAIKRRGLFDMDVVAVVNDTVGTLMTCAYEDPNCEIGVIFGTGTNACYMEDMRNIEKV 256 (474)
T ss_pred EEecccccchhhhcchHHHHHHHHHHHcCCcceEEEEEEecCHHhHhhceecCCCcEEEEEECCCccceeeeeccchhhc
Confidence 9999999999999999999999999999998 999999999999999999999999999999999999999999999998
Q ss_pred CCCC----------------------------------CCCCceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCC
Q 012386 270 HGLL----------------------------------PKSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPK 315 (465)
Q Consensus 270 ~~~~----------------------------------~~~g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~ 315 (465)
.+.. +++|.+.||||+||||||||+|++|++|.+++.||++.. ++
T Consensus 257 ~~~~~~~~miIN~EWG~F~~~~~~l~~T~yD~~vD~eS~npG~~~~EKmisGmYLGEivR~vLl~m~~~~~lf~~~~-~~ 335 (474)
T KOG1369|consen 257 EGDAGRGPMCINTEWGAFGDNSLDLPRTEYDVVVDEESLNPGKQLFEKMISGMYLGEIVRLVLLDLLEEGLLFGGQS-TK 335 (474)
T ss_pred ccccCCCceEEEccccCCCccccccchhhHHHHHhhhcCCcchhHHHHHhccccHHHHHHHHHHHHhHhhhhhcccc-cc
Confidence 7421 245667999999999999999999999999999999876 67
Q ss_pred CCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCC
Q 012386 316 LKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRD 395 (465)
Q Consensus 316 l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~ 395 (465)
+ +|+.|+|+++|+|++|+++++..+.. +.+.+|++..+.+|++.++++|+.|++|||||+||||+||+++++..
T Consensus 336 l-~p~~~~T~~~S~i~~D~~~~l~~~~~-~~~~l~~~~~~~~~r~~V~~vc~~v~~RaA~L~aagIaail~k~~~~---- 409 (474)
T KOG1369|consen 336 L-TPFIFETKYVSAIEEDDTGALQETEK-ILDLLGLETTTTEDRKLVREVCDVVSRRAARLAAAGIAAILNKTGEL---- 409 (474)
T ss_pred c-CcceeccchHHhHhcCCchHHHHHHH-HHHhhCCCcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhccc----
Confidence 7 99999999999999999999998888 77779998899999999999999999999999999999999999852
Q ss_pred CCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHHHHhcccch
Q 012386 396 GEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYLE 461 (465)
Q Consensus 396 ~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~Aa~~~~~~~ 461 (465)
...+++||+|||+|++||.|+++|+++++++++ ....|.|.+++|||++|||++||+++++++
T Consensus 410 -~~~~~~VgvdGsly~~yP~f~~~m~~~l~eLlg--~~~~v~i~~s~dgSg~GAAL~Aav~~~~~~ 472 (474)
T KOG1369|consen 410 -SRKRVTVGVDGSLYKNHPFFREYLKEALRELLG--PSIHVKLVLSEDGSGRGAALIAAVASRLKQ 472 (474)
T ss_pred -ccCceEEEeccchhHcCchHHHHHHHHHHHHhC--CCceEEEEECCCCccccHHHHHHHHhhhhc
Confidence 225789999999999999999999999999998 356899999999999999999999998864
|
|
| >PTZ00107 hexokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-100 Score=796.50 Aligned_cols=405 Identities=34% Similarity=0.542 Sum_probs=362.9
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC---------CCCCcceeccccccCCCCCcceeEEEEEeCCce
Q 012386 36 RAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE---------GGSKLKMLISYVDNLPTGDEKGLFYALDLGGTN 106 (465)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~---------~~s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTN 106 (465)
+..+.+++++++|.+|.++|++|+++|.+||++||+++ ++|+++||||||+++|||+|+|.||||||||||
T Consensus 6 ~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~~~~~~~~~~~s~l~Mlps~v~~lPtG~E~G~fLAlDlGGTN 85 (464)
T PTZ00107 6 KQRVRLASLVNQFTMSKEKLKELVDYFLYELVEGLEAHRRHRNLWIPNECSFKMLDSCVYNLPTGKEKGVYYAIDFGGTN 85 (464)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhcccccccccCCCCCCccccccccCCCCCCCccceEEEEecCCce
Confidence 34566788888999999999999999999999999875 358899999999999999999999999999999
Q ss_pred EEEEEEEecCCcceeEEEEeeeeecCCCcccC---------CcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeee
Q 012386 107 FRVLRVQLGGREGRVVKQEFEEVSIPPHLMTG---------SSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFS 177 (465)
Q Consensus 107 lRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~---------~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfS 177 (465)
|||++|+|.|++ .....+++++||++++.+ ++++||||||+||.+|+++++... ...+.+++|||||
T Consensus 86 ~RV~~V~L~g~~--~~~~~~~~~~ip~~~~~~~~~~~~k~~t~~~lFd~IA~~i~~fl~~~~~~~--~~~~~l~lGfTFS 161 (464)
T PTZ00107 86 FRAVRVSLRGGG--KMERTQSKFSLPKSALLGEKGLLDKKATATDLFDHIAKSIKKMMEENGDPE--DLNKPVPVGFTFS 161 (464)
T ss_pred EEEEEEEeCCCC--ceeeEEEEEeCCHHHhccccccccccCCHHHHHHHHHHHHHHHHHhccccc--cccccccceeEEe
Confidence 999999998863 333344589999998888 899999999999999999876211 1235799999999
Q ss_pred cccccccCCceEEeccCCcccc-----CCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccC----CceEEE
Q 012386 178 FPVRQTSIASGDLIKWTKGFSI-----EDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN----KDAIAA 248 (465)
Q Consensus 178 fPv~q~~i~~g~Li~wtKgF~~-----~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~----~~~~ig 248 (465)
||++|+++++|+|++|||||++ ++++|+||+++|+++|+|+++||+|+||+|||||||++++|.+ +++.||
T Consensus 162 FP~~Q~si~~g~Li~WtKGF~~~~~~~~~v~G~DV~~lL~~Al~r~~l~v~v~AivNDTVgTL~a~ay~~~~~~~~~~iG 241 (464)
T PTZ00107 162 FPCTQLSVNNAILIDWTKGFETGRATNDPVEGKDVGELLNDAFKRNNVPANVVAVLNDTVGTLISCAYQKPKNTPPCQVG 241 (464)
T ss_pred eeeecccCCceEEEEeccceeeccCCCCCccCchHHHHHHHHHHHcCCCceEEEEEEcCHHHHHHHHhcCcCCCCCceEE
Confidence 9999999999999999999999 9999999999999999999999999999999999999999999 999999
Q ss_pred EEEccccceeEEccCCCCcc---------cCC------------C----CCCCCceeeeehhccccHHHHHHHHHHHHhh
Q 012386 249 VILGTGTNAAYVERAHAIPK---------WHG------------L----LPKSGEMIFEKIISGMYLGEIVRRVLCRMAE 303 (465)
Q Consensus 249 lIlGTG~Na~yie~~~~i~k---------~~~------------~----~~~~g~~~fEkm~SG~YLGEi~R~~l~~~~~ 303 (465)
+|+|||+|+||+|+....++ |.. . .+++|.|+||||+||+|||||+|++++++.+
T Consensus 242 lIlGTG~NacY~E~~~~~~~~~~~iINtEwG~F~~~lp~T~~D~~lD~~S~npg~Q~fEKmiSG~YLGEi~Rlvl~~l~~ 321 (464)
T PTZ00107 242 VIIGTGSNACYFEPEVSAYGYAGTPINMECGNFDSKLPITPYDLEMDWYTPNRGRQQFEKMISGAYLGEISRRLIVHLLQ 321 (464)
T ss_pred EEEeccccceeeehhhccCCCCcEEEEeeccccCCCCCCChHHHHHhhcCCCCCcCchhhHHhhhhHHHHHHHHHHHHHh
Confidence 99999999999997543221 111 1 1357888999999999999999999999987
Q ss_pred cccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012386 304 EANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVG 383 (465)
Q Consensus 304 ~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaa 383 (465)
+ ..|+.|.++++|+|+++|.|+.|+++++..+.++|++.+++. ++.+|++.+++||+.|.+|||+|+|++|+|
T Consensus 322 ~------~~~~~l~~~~~~~t~~ls~i~~d~s~~l~~~~~~l~~~~~~~-~~~~d~~~lr~i~~~V~~RAA~L~Aa~iaa 394 (464)
T PTZ00107 322 L------KAPPKMWQSGSFESEDASMILNDQSPDLQFSRQVIKEAWDVD-LTDEDLYTIRKICELVRGRAAQLAAAFIAA 394 (464)
T ss_pred c------CCchhhcCCcccccHHHHhhhcCCCchHHHHHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 347788899999999999999999999999999999998884 788999999999999999999999999999
Q ss_pred HHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHHHHhcc
Q 012386 384 ILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 458 (465)
Q Consensus 384 ii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~Aa~~~~ 458 (465)
|+++++... ++++|++|||+|++||.|++++++++++++++. ..+|.|++++|||++|||++||++++
T Consensus 395 il~k~~~~~------~~~~VgvDGSv~~~~p~f~~~~~~~l~~ll~~~-~~~v~l~~a~DGSg~GAAl~AA~~~~ 462 (464)
T PTZ00107 395 PAKKTRTVQ------GKATVAIDGSVYVKNPWFRRLLQEYINSILGPD-AGNVVFYLADDGSGKGAAIIAAMVAN 462 (464)
T ss_pred HHHHhCCCC------CceEEEEeCcceecCccHHHHHHHHHHHHhCCC-CCcEEEEEccCchHHHHHHHHHHhcc
Confidence 999998721 468999999999999999999999999999876 56899999999999999999999874
|
|
| >COG5026 Hexokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-87 Score=668.13 Aligned_cols=413 Identities=38% Similarity=0.592 Sum_probs=375.8
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeccccccCCCCCcceeEEEEEeCCceEEEEEE
Q 012386 33 RWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112 (465)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~~~s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V 112 (465)
-|..+++.+.++++.|.+|.|+|.++.++|.+||++||+...++.++|+|+||...|+|+|+|.||+||+||||||+++|
T Consensus 13 ~~~~l~~~~~~~~~~~~~p~e~l~~v~~~Fieel~kgL~~~~G~~l~MIP~~v~~~p~g~e~g~~LaiD~GGTnlRvc~V 92 (466)
T COG5026 13 VEAALEQAVEELVESFTVPTEDLREVVKAFIEELEKGLQPKSGDFLPMIPTWVAPLPTGNESGSVLAIDLGGTNLRVCLV 92 (466)
T ss_pred ccHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhccCCCCCCccccccccccCCCCCCCCCCEEEEecCCceEEEEEE
Confidence 57889999999999999999999999999999999999954434599999999999999999999999999999999999
Q ss_pred EecCCcceeEEEEeeeeecCCCcccC-CcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEEe
Q 012386 113 QLGGREGRVVKQEFEEVSIPPHLMTG-SSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLI 191 (465)
Q Consensus 113 ~l~g~~~~i~~~~~~~~~ip~~~~~~-~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li 191 (465)
.++|.+...+.+ + ++.+|.+.... +.+++|++||++++.|++++..+. ..+.+++|||||||++|+++++|.|+
T Consensus 93 ~l~g~gt~~~~~-s-ks~lp~e~~~~~~~~~l~~~iadrl~~fi~~~~~~~---~~~~l~~gfTFSYP~~q~sin~g~l~ 167 (466)
T COG5026 93 VLGGDGTFDIEQ-S-KSFLPVECRDSESRDELFGFIADRLAAFIKEQHPSG---YGSKLPIGFTFSYPLNQTSINEGQLI 167 (466)
T ss_pred EeCCCCCccccc-C-cccCchhhccCCChHHHHHHHHHHHHHHHHHhCchh---ccCcceeeEEEeccccccccCceeeE
Confidence 998876544433 2 44499887755 789999999999999999887643 25689999999999999999999999
Q ss_pred ccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCCceEEEEEEccccceeEEccCCCCcccCC
Q 012386 192 KWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHG 271 (465)
Q Consensus 192 ~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~ 271 (465)
+|||||++++++|.||+++|+++|+++++|++|++|+|||+||++++.|.++++.||+|+|||||+||+++...|||+..
T Consensus 168 rwTKgf~i~e~ig~dvv~~l~e~l~~r~~pi~v~aviNDttgtlla~~yt~~~~~iG~IfGTGtN~~y~e~~~~ipkl~~ 247 (466)
T COG5026 168 RWTKGFDIPEVIGTDVVRLLQEALSARNLPIRVVAVINDTTGTLLASVYTSSETIIGIIFGTGTNGCYCEPKGRIPKLPR 247 (466)
T ss_pred eecccCcchhhhhhhHHHHHHHHHHhcCCceEEEEEecccHHHHHHHhhcCCCCeEEEEEecCccceEEeecccCCcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998872
Q ss_pred C-C-----------------------------------CCCCceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCC
Q 012386 272 L-L-----------------------------------PKSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPK 315 (465)
Q Consensus 272 ~-~-----------------------------------~~~g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~ 315 (465)
. + |++|.+.||||+||+|||||+|++|.++..++.+|.+..|++
T Consensus 248 d~~~~~~pm~iN~EwGsfdn~~~~Lp~t~ydv~idq~s~~pg~~~~Ek~~sG~yLGellr~~L~~l~~qg~~~~~q~~~~ 327 (466)
T COG5026 248 DDLPETGPMLINCEWGSFDNELSVLPRTKYDVLIDQESPNPGHQIFEKMSSGMYLGELLRLILRNLYEQGLIFNGQDPEK 327 (466)
T ss_pred ccccccCCeEEEecccccCcceeeccccceeeeeccCCCCcchHHHhhhhcceeHHHHHHHHHHHHHHHHhhccccchhh
Confidence 0 1 234555999999999999999999999999999999899999
Q ss_pred CCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCC
Q 012386 316 LKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRD 395 (465)
Q Consensus 316 l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~ 395 (465)
+..|+.++|..+|.++.|++++++++...+.+.|+. ..+.++++.++.+|+.|++|||||+|++|+|++.+.+..
T Consensus 328 ~~~p~~l~t~~~s~i~~D~~~nl~~t~~~f~~~~~~-~tt~eer~lI~~l~~~i~~RAArlaa~~iaAi~~ktG~~---- 402 (466)
T COG5026 328 LTDPFALSTSVLSRIEEDPFENLRNTLTTFLNDFRA-PTTKEERKLIRRLVELIGRRAARLAAVPIAAIVIKTGAY---- 402 (466)
T ss_pred cccceeeecchhhhhccccccccchhHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHhhHHHHhhhHHHhhhhcCCC----
Confidence 999999999999999999999999999999998998 478899999999999999999999999999999999852
Q ss_pred CCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHHHHhccc
Q 012386 396 GEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQY 459 (465)
Q Consensus 396 ~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~Aa~~~~~ 459 (465)
++..|+.||+++++||.|+++++++++++++.... .+.+++++|||++|||++|+.+.+.
T Consensus 403 ---k~~~v~~dGsv~e~yp~f~~~~~~~l~~~~g~~~~-~i~i~~a~dgsglGAAl~a~~~~k~ 462 (466)
T COG5026 403 ---KAYHVGADGSVIERYPGFRSMLREALKALLGEEGE-KIKIKPAEDGSGLGAALCALLAQKP 462 (466)
T ss_pred ---ccceeeeecchhhhchhHHHHHHHHHHHhhcccCc-eeeEEecccCcchHHHHHHHHhccc
Confidence 35579999999999999999999999999985444 8999999999999999999887643
|
|
| >PF00349 Hexokinase_1: Hexokinase; InterPro: IPR022672 Hexokinase is an important enzyme that catalyses the ATP-dependent conversion of aldo- and keto-hexose sugars to the hexose-6-phosphate (H6P) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-56 Score=420.90 Aligned_cols=202 Identities=48% Similarity=0.753 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCC--CcceeccccccCCCCCcceeEEEEEeCCceEEEEEEE
Q 012386 36 RAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGS--KLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQ 113 (465)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~~~s--~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V~ 113 (465)
+..+.++++.++|.+|.++|++|+++|++||+.||++++.+ +++||||||+++|+|+|+|.|||||||||||||++|+
T Consensus 2 ~~~~~v~~~~~~f~~s~~~L~~i~~~f~~em~~gL~~~~~~~~~l~MlPs~v~~~P~G~E~G~~LalDlGGTnlRv~~V~ 81 (206)
T PF00349_consen 2 DLQQAVQKLLQQFTLSDEQLQEISDRFLEEMEKGLAKSSSSMSSLKMLPSYVTSLPTGNEKGDFLALDLGGTNLRVALVE 81 (206)
T ss_dssp HHHHHHHHHHGGGS--HHHHHHHHHHHHHHHHHHHSTTTGCG-SS-EEEESEESSTTSTTEEEEEEEEESSSSEEEEEEE
T ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHccCCCCceeeeccccccccCCCCCCCceEEEEeecCcEEEEEEEE
Confidence 45678889999999999999999999999999999986522 4999999999999999999999999999999999999
Q ss_pred ecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEEecc
Q 012386 114 LGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKW 193 (465)
Q Consensus 114 l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li~w 193 (465)
+.|++ .....+++|+||.+++.+++++||||||+||.+|+++++.. +.++.+++|||||||++|+++++|+|++|
T Consensus 82 L~g~~--~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~f~~~~~~~---~~~~~l~lGfTFSFP~~q~~~~~g~li~w 156 (206)
T PF00349_consen 82 LSGNG--KVEIEQEKYKIPEELMNGSGEELFDFIADCIAEFLKEHNLE---SRDEKLPLGFTFSFPVEQTSLNSGTLIRW 156 (206)
T ss_dssp EESSS--EEEEEEEEEE--HHHHTSBHHHHHHHHHHHHHHHHHHTTTT---STTSEEEEEEEEESSEEESSTTEEEE---
T ss_pred EcCCC--CceeeeccccCChHHhcCCcccHHHHHHHHHHHHHHHhccc---ccccccceEEEEEEEEEeccCCCeEEEEe
Confidence 98875 33334468999999999999999999999999999987652 12678999999999999999999999999
Q ss_pred CCccccCCCCCCcHHHHHHHHHHHcCCC-eeEEEEEechHHHhhcccccC
Q 012386 194 TKGFSIEDTVGEDVVGELTKAMERIGLD-MRVAALVNDTIGTLAGGRYHN 242 (465)
Q Consensus 194 tKgF~~~~~~g~dv~~~L~~al~~~gl~-v~v~alvNDtvatlla~~y~~ 242 (465)
||||++++++|+|++++|+++|+|++++ |+|+||+|||||||++++|.+
T Consensus 157 tKgf~~~~~~G~dv~~lL~~al~r~~~~~v~v~aivNDTVgTLla~~Y~~ 206 (206)
T PF00349_consen 157 TKGFDISGVVGKDVVELLQDALKRRGLPNVKVVAIVNDTVGTLLAGAYQD 206 (206)
T ss_dssp -TT---BTGTTSBHHHHHHHHHHHHTSSEEEEEEEE-HHHHHHHHHHTT-
T ss_pred eccccccCCCCCccchhHHHHHHHhcccCcceEEEEECCHHHhhhhhcCC
Confidence 9999999999999999999999999998 999999999999999999964
|
The enzyme can catalyse this reaction on glucose, fructose, sorbitol and glucosamine, and as such is the first step in a number of metabolic pathways []. The addition of a phosphate group to the sugar acts to trap it in a cell, since the negatively charged phosphate cannot easily traverse the plasma membrane. The enzyme is widely distributed in eukaryotes. There are three isozymes of hexokinase in yeast (PI, PII and glucokinase): isozymes PI and PII phosphorylate both aldo- and keto-sugars; glucokinase is specific for aldo-hexoses. All three isozymes contain two domains []. Structural studies of yeast hexokinase reveal a well-defined catalytic pocket that binds ATP and hexose, allowing easy transfer of the phosphate from ATP to the sugar []. Vertebrates contain four hexokinase isozymes, designated I to IV, where types I to III contain a duplication of the two-domain yeast-type hexokinases. Both the N- and C-terminal halves bind hexose and H6P, though in types I an III only the C-terminal half supports catalysis, while both halves support catalysis in type II. The N-terminal half is the regulatory region. Type IV hexokinase is similar to the yeast enzyme in containing only the two domains, and is sometimes incorrectly referred to as glucokinase. The different vertebrate isozymes differ in their catalysis, localisation and regulation, thereby contributing to the different patterns of glucose metabolism in different tissues []. Whereas types I to III can phosphorylate a variety of hexose sugars and are inhibited by glucose-6-phosphate (G6P), type IV is specific for glucose and shows no G6P inhibition. Type I enzyme may have a catabolic function, producing H6P for energy production in glycolysis; it is bound to the mitochondrial membrane, which enables the coordination of glycolysis with the TCA cycle. Types II and III enzyme may have anabolic functions, providing H6P for glycogen or lipid synthesis. Type IV enzyme is found in the liver and pancreatic beta-cells, where it is controlled by insulin (activation) and glucagon (inhibition). In pancreatic beta-cells, type IV enzyme acts as a glucose sensor to modify insulin secretion. Mutations in type IV hexokinase have been associated with diabetes mellitus. Hexokinase (2.7.1.1 from EC), a fructose and glucose phosphorylating enzyme, contains two structurally similar domains represented by this family and PF03727 from PFAM. Some hexokinases have two copies of each of these domains. This entry represents the N-terminal domain.; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 3O1W_A 3O6W_A 3O4W_B 3O08_B 3O80_A 3O5B_A 3O8M_A 3O1B_A 1BG3_A 4DHY_A .... |
| >PF03727 Hexokinase_2: Hexokinase; InterPro: IPR022673 Hexokinase is an important enzyme that catalyses the ATP-dependent conversion of aldo- and keto-hexose sugars to the hexose-6-phosphate (H6P) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-47 Score=370.47 Aligned_cols=211 Identities=38% Similarity=0.638 Sum_probs=183.7
Q ss_pred ceEEEEEEccccceeEEccCCCCcccCCC--------------------------------CCCCCceeeeehhccccHH
Q 012386 244 DAIAAVILGTGTNAAYVERAHAIPKWHGL--------------------------------LPKSGEMIFEKIISGMYLG 291 (465)
Q Consensus 244 ~~~iglIlGTG~Na~yie~~~~i~k~~~~--------------------------------~~~~g~~~fEkm~SG~YLG 291 (465)
+|.||+|+|||+|+||+|+.++|+++++. .+.+|.++||||+||+|||
T Consensus 1 ~~~iGlIlGTG~Na~Y~e~~~~i~~~~~~~~~~iINtEwg~f~~~~~~~~~t~~D~~lD~~s~~pg~q~~EKmvsG~YLG 80 (243)
T PF03727_consen 1 ECRIGLILGTGTNACYMEKTSNIPKLKGKDGKMIINTEWGNFDNGLLDLPRTEYDKQLDAESPNPGFQPFEKMVSGMYLG 80 (243)
T ss_dssp TEEEEEEESSSEEEEEEEEGGG-TTSSTSSSEEEEEE-GGGTTTTTTTTTS-HHHHHHHHTSSSTTSSTTHHHTSHHHHH
T ss_pred CcEEEEEEeCCeeEEEeeecccCccccccCCeEEEEeecCCCCCCCccCCCCcccHHHhhhhhccCceEEeeEeceecHH
Confidence 48999999999999999999999888761 0245777999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHH
Q 012386 292 EIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVAT 371 (465)
Q Consensus 292 Ei~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~ 371 (465)
||+|++++++.+++.||++..|+.|.++++|+|++||.+++|++.++..+..+|.+.+++. ++.+|++.++.||++|++
T Consensus 81 El~Rlvl~~l~~~~~lf~~~~~~~l~~~~~~~t~~~s~i~~d~~~~~~~~~~~l~~~~~~~-~t~~d~~~lr~I~~aV~~ 159 (243)
T PF03727_consen 81 ELVRLVLLDLIKEGLLFGGQDPEKLNTPYSFDTKFLSEIEEDPSDDLSETREILQEFFGLP-PTEEDRQILRRICEAVST 159 (243)
T ss_dssp HHHHHHHHHHHHTTSSGGGS--TTTTSTTSS-HHHHHHHTCT-TTCHHHHHHHHHHCTTSS-S-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCccCCcchHHhcCCCcccHHHHhhhhhhcccchHHHHHHHhhccCCC-CCHHHHHHHHHHHHHHHH
Confidence 9999999999999999998899999999999999999999999999999999999999984 799999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHH
Q 012386 372 RGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAAL 451 (465)
Q Consensus 372 RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl 451 (465)
|||+|+|++|+||+++++.... .+.++++|++|||+|++||.|++++++++++++++. ..+|+|++++|||++|||+
T Consensus 160 RAA~L~Aa~iaail~~~~~~~~--~~~~~v~VavDGSv~~~~p~f~~~l~~~l~~L~~~~-~~~v~~~~~~dgsg~GAAi 236 (243)
T PF03727_consen 160 RAARLVAAAIAAILNKIRENKG--RPRREVTVAVDGSVYEKYPNFRERLQEALDELLPEE-GCKVEFVLSEDGSGVGAAI 236 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT--CSSEEEEEEEESHHHHHSTTHHHHHHHHHHHHSTT--CEEEEEEE-SSTHHHHHHH
T ss_pred HhHHHHHHHHHHHHHhhhcccc--ccCCceEEEEeCcceeeCHHHHHHHHHHHHHhcccc-cceEEEEEecCchHHHHHH
Confidence 9999999999999999642110 223588999999999999999999999999998875 5689999999999999999
Q ss_pred HHHHhcc
Q 012386 452 LAASHSQ 458 (465)
Q Consensus 452 ~Aa~~~~ 458 (465)
+||+++|
T Consensus 237 ~AA~a~r 243 (243)
T PF03727_consen 237 AAAVACR 243 (243)
T ss_dssp HHHHHHH
T ss_pred HHHHhcC
Confidence 9998864
|
The enzyme can catalyse this reaction on glucose, fructose, sorbitol and glucosamine, and as such is the first step in a number of metabolic pathways []. The addition of a phosphate group to the sugar acts to trap it in a cell, since the negatively charged phosphate cannot easily traverse the plasma membrane. The enzyme is widely distributed in eukaryotes. There are three isozymes of hexokinase in yeast (PI, PII and glucokinase): isozymes PI and PII phosphorylate both aldo- and keto-sugars; glucokinase is specific for aldo-hexoses. All three isozymes contain two domains []. Structural studies of yeast hexokinase reveal a well-defined catalytic pocket that binds ATP and hexose, allowing easy transfer of the phosphate from ATP to the sugar []. Vertebrates contain four hexokinase isozymes, designated I to IV, where types I to III contain a duplication of the two-domain yeast-type hexokinases. Both the N- and C-terminal halves bind hexose and H6P, though in types I an III only the C-terminal half supports catalysis, while both halves support catalysis in type II. The N-terminal half is the regulatory region. Type IV hexokinase is similar to the yeast enzyme in containing only the two domains, and is sometimes incorrectly referred to as glucokinase. The different vertebrate isozymes differ in their catalysis, localisation and regulation, thereby contributing to the different patterns of glucose metabolism in different tissues []. Whereas types I to III can phosphorylate a variety of hexose sugars and are inhibited by glucose-6-phosphate (G6P), type IV is specific for glucose and shows no G6P inhibition. Type I enzyme may have a catabolic function, producing H6P for energy production in glycolysis; it is bound to the mitochondrial membrane, which enables the coordination of glycolysis with the TCA cycle. Types II and III enzyme may have anabolic functions, providing H6P for glycogen or lipid synthesis. Type IV enzyme is found in the liver and pancreatic beta-cells, where it is controlled by insulin (activation) and glucagon (inhibition). In pancreatic beta-cells, type IV enzyme acts as a glucose sensor to modify insulin secretion. Mutations in type IV hexokinase have been associated with diabetes mellitus. Hexokinase (2.7.1.1 from EC), a fructose and glucose phosphorylating enzyme, contains two structurally similar domains represented by this family and PF00349 from PFAM. Some members of the family have two copies of each of these domains. This entry represents the more C-terminal domain.; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 4DHY_A 3ID8_A 4DCH_A 3FGU_A 3QIC_A 3A0I_X 3VEY_A 3IDH_A 3VEV_A 3VF6_A .... |
| >PRK13310 N-acetyl-D-glucosamine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.1e-25 Score=219.11 Aligned_cols=268 Identities=20% Similarity=0.229 Sum_probs=199.1
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
.+++||+|||++|++++++.|+ ++.+. +++.|. .+.+++.+.|.+.+.++....+ ....+|++
T Consensus 1 ~~lgidig~t~i~~~l~d~~g~---i~~~~--~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~~~~igia 63 (303)
T PRK13310 1 MYYGFDIGGTKIELGVFNEKLE---LQWEE--RVPTPR----DSYDAFLDAVCELVAEADQRFG--------CKGSVGIG 63 (303)
T ss_pred CeEEEEeCCCcEEEEEECCCCc---EEEEE--EecCCC----cCHHHHHHHHHHHHHHHHhhcC--------CcceEEEe
Confidence 3799999999999999999884 66443 455553 3577889999988888864432 13479999
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCceEEEEEE
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVIL 251 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIl 251 (465)
+|+|++.. .+.+ .++ +.+++.+.|+.+.|++.+ ++|| .+.||+++.+++++|. +.++.+++.+
T Consensus 64 ~pG~vd~~---~g~~-~~~---~~~~w~~~~l~~~l~~~~---~~pV---~ieNDa~aaalaE~~~g~~~~~~~~~~l~~ 130 (303)
T PRK13310 64 IPGMPETE---DGTL-YAA---NVPAASGKPLRADLSARL---GRDV---RLDNDANCFALSEAWDDEFTQYPLVMGLIL 130 (303)
T ss_pred CCCcccCC---CCEE-ecc---CcccccCCcHHHHHHHHH---CCCe---EEeccHhHHHHHHhhhccccCCCcEEEEEe
Confidence 99999742 2332 222 344455899999999999 8996 9999999999999874 5689999999
Q ss_pred ccccceeEEccCCCCcccCC---C-----CCCC----------------Cce-eeeehhccccHHHHHHHHHHHHhhccc
Q 012386 252 GTGTNAAYVERAHAIPKWHG---L-----LPKS----------------GEM-IFEKIISGMYLGEIVRRVLCRMAEEAN 306 (465)
Q Consensus 252 GTG~Na~yie~~~~i~k~~~---~-----~~~~----------------g~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~ 306 (465)
|||++++++.+++.+.+.++ + +++. |+. |+|.++|+..|-+..+. ..
T Consensus 131 gtGiG~giv~~G~l~~G~~g~aGEiGH~~v~~~~~~~~g~~~~~~~C~CG~~gclE~~~S~~al~~~~~~----~~---- 202 (303)
T PRK13310 131 GTGVGGGLVFNGKPISGRSYITGEFGHMRLPVDALTLLGWDAPLRRCGCGQKGCIENYLSGRGFEWLYQH----YY---- 202 (303)
T ss_pred cCceEEEEEECCEEeeCCCCccccccceeecccccccccccCCCccCCCCCcchHHHhhcHHHHHHHHHH----hc----
Confidence 99999999999988877654 2 1221 222 99999999987433321 00
Q ss_pred CCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012386 307 FFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILK 386 (465)
Q Consensus 307 lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~ 386 (465)
. . .+ ...++++. ++..+..|..+++++++++|.+|+++++
T Consensus 203 ----~-~-------~~-----------------~~~~l~~~-----------~~~gd~~a~~~~~~~~~~la~~l~n~~~ 242 (303)
T PRK13310 203 ----G-E-------PL-----------------QAPEIIAL-----------YYQGDEQAVAHVERYLDLLAICLGNILT 242 (303)
T ss_pred ----c-C-------CC-----------------CHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00 11222222 5667788999999999999999999999
Q ss_pred HhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHHHH
Q 012386 387 KLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLA 453 (465)
Q Consensus 387 ~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~A 453 (465)
.++| + .|.++|++.+ .+.|.+.+++.+++...+.. ..+.|+.+ +|++.+|||.++
T Consensus 243 ~ldP--------~--~IvlgG~~~~-~~~~~~~l~~~~~~~~~~~~-~~~~i~~s~~~~~a~~~GAa~~~ 300 (303)
T PRK13310 243 IVDP--------H--LVVLGGGLSN-FDAIYEQLPKRLPRHLLPVA-RVPRIEKARHGDAGGVRGAAFLH 300 (303)
T ss_pred HcCC--------C--EEEECCcccC-hHHHHHHHHHHHHHHhcccc-cCceEEEcccCchHHHHhHHHHh
Confidence 9999 4 6778999987 78899999999987654432 34566555 888999999876
|
|
| >TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase) | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-24 Score=215.44 Aligned_cols=284 Identities=19% Similarity=0.209 Sum_probs=204.9
Q ss_pred EEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeee
Q 012386 98 YALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFS 177 (465)
Q Consensus 98 LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfS 177 (465)
|+||+|||++|++++++.|+ ++.+. +++.+ .+.+++++.|.+.|.+++++.+... .+...+|+++|
T Consensus 1 lgidig~t~~~~~l~d~~g~---i~~~~--~~~~~-----~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~gIgva~p 66 (318)
T TIGR00744 1 IGVDIGGTTIKLGVVDEEGN---ILSKW--KVPTD-----TTPETIVDAIASAVDSFIQHIAKVG----HEIVAIGIGAP 66 (318)
T ss_pred CEEEeCCCEEEEEEECCCCC---EEEEE--EeCCC-----CCHHHHHHHHHHHHHHHHHhcCCCc----cceEEEEEecc
Confidence 58999999999999999884 65433 33433 2467899999999999998765322 45789999999
Q ss_pred cccccc-c-CCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCceEEEEEE
Q 012386 178 FPVRQT-S-IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVIL 251 (465)
Q Consensus 178 fPv~q~-~-i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIl 251 (465)
+|++.. + +.....+.|. +.|+.+.|++.+ ++|| .+.||+++.+++++|. +.++.+.+++
T Consensus 67 G~vd~~~g~~~~~~~~~w~---------~~~l~~~l~~~~---~~pv---~v~NDa~~~alaE~~~g~~~~~~~~~~v~i 131 (318)
T TIGR00744 67 GPVNRQRGTVYFAVNLDWK---------QEPLKEKVEARV---GLPV---VVENDANAAALGEYKKGAGKGARDVICITL 131 (318)
T ss_pred ccccCCCCEEEecCCCCCC---------CCCHHHHHHHHH---CCCE---EEechHHHHHHHHHHhcccCCCCcEEEEEe
Confidence 999743 2 2222333555 689999999999 8996 9999999999999874 5688999999
Q ss_pred ccccceeEEccCCCCcccCC---CC-----CCCC-------ce-eeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCC
Q 012386 252 GTGTNAAYVERAHAIPKWHG---LL-----PKSG-------EM-IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPK 315 (465)
Q Consensus 252 GTG~Na~yie~~~~i~k~~~---~~-----~~~g-------~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~ 315 (465)
|||++++++.+++.+.+.++ ++ .+.| .. |+|.++|+..|-+..+. .... . ..++.
T Consensus 132 gtGiG~giv~~G~~~~G~~g~agEiGh~~v~~~g~~~C~cG~~gclE~~~s~~al~~~~~~---~~~~----~--~~~~~ 202 (318)
T TIGR00744 132 GTGLGGGIIINGEIRHGHNGVGAEIGHIRMVPDGRLLCNCGKQGCIETYASATGLVRYAKR---ANAK----P--ERAEV 202 (318)
T ss_pred CCccEEEEEECCEEeecCCCCCcccCceEeCCCCCcccCCCCcchHHHHhCHHHHHHHHHH---Hhcc----c--cccch
Confidence 99999999999988876654 21 2233 22 99999999988443222 1100 0 00011
Q ss_pred CCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCC
Q 012386 316 LKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRD 395 (465)
Q Consensus 316 l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~ 395 (465)
+.. ...+. . .....+++. ++.++..|..+++++++++|.+|+++++.++|
T Consensus 203 ~~~-----------~~~~~--~-~~~~~i~~~-----------~~~gD~~a~~i~~~~~~~L~~~i~~~~~~~dP----- 252 (318)
T TIGR00744 203 LLA-----------LGDGD--G-ISAKHVFVA-----------ARQGDPVAVDSYREVARWAGAGLADLASLFNP----- 252 (318)
T ss_pred hhc-----------ccccC--C-CCHHHHHHH-----------HHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC-----
Confidence 100 00000 0 012333333 66778999999999999999999999999998
Q ss_pred CCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHHHHH
Q 012386 396 GEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLAA 454 (465)
Q Consensus 396 ~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~Aa 454 (465)
+ .|.++|++.+..+.|.+.+++.+++...+.....+.|..+ ++++.+|||.++.
T Consensus 253 ---~--~IvlgG~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~Gaa~~~~ 309 (318)
T TIGR00744 253 ---S--AIVLGGGLSDAGDLLLDPIRKSYKRWLFGGARQVADIIAAQLGNDAGLVGAADLAR 309 (318)
T ss_pred ---C--EEEECChhhhCcHHHHHHHHHHHHHHhhhcccCCcEEEEcccCCchhhHHHHHHHH
Confidence 4 5889999999999999999999988755433344555554 7889999998863
|
This alignment models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution. |
| >PRK09698 D-allose kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-23 Score=207.48 Aligned_cols=271 Identities=18% Similarity=0.179 Sum_probs=194.5
Q ss_pred ceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceee
Q 012386 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (465)
Q Consensus 94 ~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG 173 (465)
.+++++||+|||++|+++++++|+ ++.+. .++.|.. .+.+ .++.+++.|.+++++.+ .+...+|
T Consensus 3 ~~~~lgidig~t~i~~~l~d~~g~---i~~~~--~~~~~~~---~~~~-~~~~l~~~i~~~~~~~~-------~~i~gig 66 (302)
T PRK09698 3 KNVVLGIDMGGTHIRFCLVDAEGE---ILHCE--KKRTAEV---IAPD-LVSGLGEMIDEYLRRFN-------ARCHGIV 66 (302)
T ss_pred ccEEEEEEcCCcEEEEEEEcCCCC---EEEEE--EeCCccc---cchH-HHHHHHHHHHHHHHHcC-------CCeeEEE
Confidence 468999999999999999999884 66433 4555533 2344 49999999999998753 2478899
Q ss_pred eeeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc---CCceEEEEE
Q 012386 174 FTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH---NKDAIAAVI 250 (465)
Q Consensus 174 ~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~---~~~~~iglI 250 (465)
+++|+|++.. .+.++. +..+..+++.+.|+.+.|++++ ++|| .+.||+++.++++.+. +.++.+++.
T Consensus 67 ia~pG~vd~~---~g~i~~-~~~~~~~~~~~~~l~~~l~~~~---~~pv---~v~NDa~aaa~~E~~~~~~~~~~~~~v~ 136 (302)
T PRK09698 67 MGFPALVSKD---RRTVIS-TPNLPLTALDLYDLADKLENTL---NCPV---FFSRDVNLQLLWDVKENNLTQQLVLGAY 136 (302)
T ss_pred EeCCcceeCC---CCEEEe-cCCCCccccccCCHHHHHHHHh---CCCE---EEcchHhHHHHHHHHhcCCCCceEEEEE
Confidence 9999999742 233322 2222222566899999999999 9996 9999999999998753 456899999
Q ss_pred EccccceeEEccCCCCcccCC---CC-----CCC------Cce-eeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCC
Q 012386 251 LGTGTNAAYVERAHAIPKWHG---LL-----PKS------GEM-IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPK 315 (465)
Q Consensus 251 lGTG~Na~yie~~~~i~k~~~---~~-----~~~------g~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~ 315 (465)
+|||++++++.+++.+.+.++ ++ ++. |+. |+|.++|+..|- |..-.. + +.
T Consensus 137 lgtGIG~giv~~G~~~~G~~g~agEiGh~~v~~~~~~C~CG~~gclE~~~S~~al~---~~~~~~-------~----~~- 201 (302)
T PRK09698 137 LGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDMTQHCGCGNPGCLETNCSGMALR---RWYEQQ-------P----RD- 201 (302)
T ss_pred ecCceEEEEEECCEEeeCCCCCccccCceEeeCCCcccCCCCccchHhhcCHHHHH---HHHHHh-------c----CC-
Confidence 999999999999988877654 21 122 333 999999998873 322110 0 00
Q ss_pred CCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCC
Q 012386 316 LKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRD 395 (465)
Q Consensus 316 l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~ 395 (465)
. + ..++++. .+ + ..+++++++++|.+|+++++.++|
T Consensus 202 ----~--~-----------------~~~l~~~-~~------------~---~~~~~~~~~~la~~l~~li~~ldP----- 237 (302)
T PRK09698 202 ----Y--P-----------------LSDLFVH-AG------------D---HPFIQSLLENLARAIATSINLFDP----- 237 (302)
T ss_pred ----C--C-----------------HHHHHHH-cC------------C---HHHHHHHHHHHHHHHHHHHHHhCC-----
Confidence 0 0 1111211 00 0 025678889999999999999999
Q ss_pred CCCceEEEEEecceeccchhHHHHHHHHHHHHhccC-CCccEEEEEe---CChhHHHHHHHHH
Q 012386 396 GEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEE-VSETVVIEHS---NDGSGIGAALLAA 454 (465)
Q Consensus 396 ~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~-~~~~v~l~~a---~Dgs~iGAAl~Aa 454 (465)
+ .|+++|++.+..+.|.+.+++.+++.+... ....+.|..+ +|++.+|||.++.
T Consensus 238 ---~--~IvlgG~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~ 295 (302)
T PRK09698 238 ---D--AIILGGGVMDMPAFPRETLIAMIQKYLRKPLPYEVVRFIYASSSDFNGAQGAAILAH 295 (302)
T ss_pred ---C--EEEEcCccccCchhHHHHHHHHHHHHccCccccCCcEEEECCcCCcccHHhHHHHHH
Confidence 4 688999999988888999999999876522 2335666555 7889999998863
|
|
| >PRK09557 fructokinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-23 Score=207.88 Aligned_cols=268 Identities=19% Similarity=0.234 Sum_probs=193.7
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
.+|++|+|||++|+++++++|+ ++.+. +++.|. .+.+++.+.|++.+.++..+.+ ....+|++
T Consensus 1 ~~lgidig~t~~~~~l~d~~g~---i~~~~--~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~~~gIgi~ 63 (301)
T PRK09557 1 MRIGIDLGGTKIEVIALDDAGE---ELFRK--RLPTPR----DDYQQTIEAIATLVDMAEQATG--------QRGTVGVG 63 (301)
T ss_pred CEEEEEECCCcEEEEEECCCCC---EEEEE--EecCCC----CCHHHHHHHHHHHHHHHHhhcC--------CceEEEec
Confidence 3799999999999999999884 55443 445442 2567788888888888765432 24689999
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCceEEEEEE
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVIL 251 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIl 251 (465)
+|+|++.. .+.+.... ...+.+.|+.+.|++.+ ++|| .+.||+++.++++.+. +.++.+.+++
T Consensus 64 ~pG~vd~~---~g~i~~~~----~~~~~~~~l~~~l~~~~---~~pv---~~~NDa~aaA~aE~~~g~~~~~~~~~~l~i 130 (301)
T PRK09557 64 IPGSISPY---TGLVKNAN----STWLNGQPLDKDLSARL---NREV---RLANDANCLAVSEAVDGAAAGKQTVFAVII 130 (301)
T ss_pred CcccCcCC---CCeEEecC----CccccCCCHHHHHHHHH---CCCE---EEccchhHHHHHHHHhcccCCCCcEEEEEE
Confidence 99999642 22222111 01113789999999999 8996 8999999999999873 4688999999
Q ss_pred ccccceeEEccCCCCcccCC---C-----CCC---------C------Cce-eeeehhccccHHHHHHHHHHHHhhcccC
Q 012386 252 GTGTNAAYVERAHAIPKWHG---L-----LPK---------S------GEM-IFEKIISGMYLGEIVRRVLCRMAEEANF 307 (465)
Q Consensus 252 GTG~Na~yie~~~~i~k~~~---~-----~~~---------~------g~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~l 307 (465)
|||++++++.+++.+.+.++ + +++ + |.. |+|.++|+..|-+..+. ..
T Consensus 131 gtGiG~giv~~G~l~~G~~g~aGEiGH~~v~~~~~~~~~~~~g~~c~cG~~GclE~~~S~~al~~~~~~---~~------ 201 (301)
T PRK09557 131 GTGCGAGVAINGRVHIGGNGIAGEWGHNPLPWMDEDELRYRNEVPCYCGKQGCIETFISGTGFATDYRR---LS------ 201 (301)
T ss_pred ccceEEEEEECCEEEecCCCCCcccCceecccccccccccCCCCcCCCCCCCEEeEEEcHHHHHHHHHH---hc------
Confidence 99999999999988776653 2 111 1 222 99999999988433221 10
Q ss_pred CCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012386 308 FGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387 (465)
Q Consensus 308 f~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~ 387 (465)
. . .++ ...+++. ++..+..|+.+++++++++|.+|+++++.
T Consensus 202 ---~--~------~~~-----------------~~~l~~~-----------~~~gd~~a~~~l~~~~~~La~~l~~l~~~ 242 (301)
T PRK09557 202 ---G--K------ALK-----------------GSEIIRL-----------VEEGDPVAELAFRRYEDRLAKSLAHVINI 242 (301)
T ss_pred ---c--C------CCC-----------------HHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 001 1222222 55667889999999999999999999999
Q ss_pred hCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHHHH
Q 012386 388 LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLA 453 (465)
Q Consensus 388 ~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~A 453 (465)
++| + .|.++|++... +.|.+.+++.+++...+... .+.|+.+ +|++.+|||.++
T Consensus 243 ldP--------~--~IvlgG~~~~~-~~~~~~l~~~~~~~~~~~~~-~~~i~~s~~~~~a~~~GAa~~~ 299 (301)
T PRK09557 243 LDP--------D--VIVLGGGMSNV-DRLYPTLPALLKQYVFGGEC-ETPVRKALHGDSSGVRGAAWLW 299 (301)
T ss_pred hCC--------C--EEEEcCcccch-HHHHHHHHHHHHHHhccccc-CCeEEEcccCCchhhhhhhHhh
Confidence 999 4 68899999874 77888999999887653222 4555554 889999999764
|
|
| >PRK05082 N-acetylmannosamine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.5e-23 Score=203.38 Aligned_cols=263 Identities=16% Similarity=0.157 Sum_probs=190.2
Q ss_pred EEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeee
Q 012386 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTF 176 (465)
Q Consensus 97 ~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tf 176 (465)
+++||+|||++|+++++++|+ ++.+. .++.|.. .+.+++.+.|.+.+.++.. +...+|+++
T Consensus 3 ~lgvdig~~~i~~~l~dl~g~---i~~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~-----------~~~~igi~~ 63 (291)
T PRK05082 3 TLAIDIGGTKIAAALVGEDGQ---IRQRR--QIPTPAS---QTPEALRQALSALVSPLQA-----------QADRVAVAS 63 (291)
T ss_pred EEEEEECCCEEEEEEEcCCCc---EEEEE--EecCCCC---CCHHHHHHHHHHHHHHhhh-----------cCcEEEEeC
Confidence 799999999999999999884 65433 4555542 3567788888888877742 135799999
Q ss_pred ecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc---CCceEEEEEEcc
Q 012386 177 SFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH---NKDAIAAVILGT 253 (465)
Q Consensus 177 SfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~---~~~~~iglIlGT 253 (465)
|+|++... ...+ ...+.+++.+.|+.+.|++.+ ++|| .+.||+++.++++++. +.++.+.+.+||
T Consensus 64 pG~vd~~~---~~~~---~~~~~~~w~~~~l~~~l~~~~---~~pv---~v~NDa~a~a~aE~~~g~~~~~~~~~l~ig~ 131 (291)
T PRK05082 64 TGIINDGI---LTAL---NPHNLGGLLHFPLVQTLEQLT---DLPT---IALNDAQAAAWAEYQALPDDIRNMVFITVST 131 (291)
T ss_pred cccccCCe---eEEe---cCCCCccccCCChHHHHHHHh---CCCE---EEECcHHHHHHHHHHhcCCCCCCEEEEEECC
Confidence 99996321 1100 011223344899999999998 8996 9999999999999864 567899999999
Q ss_pred ccceeEEccCCCCcccCC---CC-----CCC------Cce-eeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCC
Q 012386 254 GTNAAYVERAHAIPKWHG---LL-----PKS------GEM-IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKI 318 (465)
Q Consensus 254 G~Na~yie~~~~i~k~~~---~~-----~~~------g~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~ 318 (465)
|++++++.+++.+.+.++ ++ ++. |.. |+|.++|+..| .|..- .. + +.
T Consensus 132 GiG~giv~~G~~~~G~~g~AGEiGh~~v~~~g~~c~CG~~GclE~~~S~~al---~~~~~-~~------~----~~---- 193 (291)
T PRK05082 132 GVGGGIVLNGKLLTGPGGLAGHIGHTLADPHGPVCGCGRRGCVEAIASGRAI---AAAAQ-GW------L----AG---- 193 (291)
T ss_pred CcceEEEECCEEeeCCCCccccccceEecCCCCCCCCCCcCchhhhcCHHHH---HHHHH-Hh------h----cC----
Confidence 999999999988876654 21 222 333 99999999988 33211 10 0 00
Q ss_pred CCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCC
Q 012386 319 PFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEK 398 (465)
Q Consensus 319 ~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~ 398 (465)
.+ ...+++. ++..+..|..+++++++++|.+|+++++.++|
T Consensus 194 ---~~-----------------~~~i~~~-----------~~~gd~~a~~~~~~~~~~la~~l~~l~~~~dp-------- 234 (291)
T PRK05082 194 ---CD-----------------AKTIFER-----------AGQGDEQAQALINRSAQAIARLIADLKATLDC-------- 234 (291)
T ss_pred ---CC-----------------HHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCC--------
Confidence 00 1122222 45566788899999999999999999999999
Q ss_pred ceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHHHH
Q 012386 399 QKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLA 453 (465)
Q Consensus 399 ~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~A 453 (465)
+ .|+++|++.. .+.|.+.+++.++++... ..+.|..+ +|++.+|||.++
T Consensus 235 e--~IvlgG~~~~-~~~~~~~i~~~l~~~~~~---~~~~i~~s~~~~~~~~~GAa~~~ 286 (291)
T PRK05082 235 Q--CVVLGGSVGL-AEGYLELVQAYLAQEPAI---YHVPLLAAHYRHDAGLLGAALWA 286 (291)
T ss_pred C--EEEEcCcccc-HHHHHHHHHHHHHhcccc---cCCeEEECccCCchhhhhHHHHh
Confidence 4 6788999765 677889999999875221 14556655 788999999875
|
|
| >COG1940 NagC Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-22 Score=205.26 Aligned_cols=279 Identities=23% Similarity=0.312 Sum_probs=203.6
Q ss_pred cceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCccee
Q 012386 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (465)
Q Consensus 93 E~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (465)
+..++++||+|||+++++++++.|+ ++... ..++|... ..+++.+.|.+.++++++... . +...+
T Consensus 4 ~~~~~lgidIggt~i~~~l~d~~g~---~l~~~--~~~~~~~~---~~~~~~~~i~~~i~~~~~~~~-~------~~~~i 68 (314)
T COG1940 4 EAMTVLGIDIGGTKIKVALVDLDGE---ILLRE--RIPTPTPD---PEEAILEAILALVAELLKQAQ-G------RVAII 68 (314)
T ss_pred cCcEEEEEEecCCEEEEEEECCCCc---EEEEE--EEecCCCC---chhHHHHHHHHHHHHHHHhcC-C------cCceE
Confidence 4558999999999999999999885 55433 45666542 236889999999999988753 1 23456
Q ss_pred eeeeecccccc--c-CCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCce
Q 012386 173 GFTFSFPVRQT--S-IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDA 245 (465)
Q Consensus 173 G~tfSfPv~q~--~-i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~~ 245 (465)
|+++++|.... . +...+.+.|. .+.|+.+.|++.+ ++|| .|.||+++.+++++|. +.++
T Consensus 69 GIgi~~pg~~~~~~~~~~~~~~~~~--------~~~~l~~~L~~~~---~~Pv---~veNDan~aalaE~~~g~~~~~~~ 134 (314)
T COG1940 69 GIGIPGPGDVDNGTVIVPAPNLGWW--------NGVDLAEELEARL---GLPV---FVENDANAAALAEAWFGAGRGIDD 134 (314)
T ss_pred EEEeccceeccCCcEEeecCCCCcc--------ccccHHHHHHHHH---CCCE---EEecHHHHHHHHHHHhCCCCCCCC
Confidence 66666665432 2 3334444444 3688999999999 9997 9999999999999985 4579
Q ss_pred EEEEEEccccceeEEccCCCCcccCC---C-----CCCCC-----ce-eeeehhccccHHHHHHHHHHHHhhcccCCCCC
Q 012386 246 IAAVILGTGTNAAYVERAHAIPKWHG---L-----LPKSG-----EM-IFEKIISGMYLGEIVRRVLCRMAEEANFFGDT 311 (465)
Q Consensus 246 ~iglIlGTG~Na~yie~~~~i~k~~~---~-----~~~~g-----~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~ 311 (465)
++.+++|||++++++.+++.+.+.++ + +.+.| +. |+|.++|+..| .|.....
T Consensus 135 ~~~i~~gtGIG~giv~~g~l~~G~~g~age~Gh~~v~~~g~c~cG~~GclE~~as~~al---~~~~~~~----------- 200 (314)
T COG1940 135 VVYITLGTGIGGGIIVNGKLLRGANGNAGEIGHMVVDPDGECGCGRRGCLETYASGRAI---LRRAAEA----------- 200 (314)
T ss_pred EEEEEEccceeEEEEECCEEeecCCCccccccceEECCCCccCCCCCCchHHhccHHHH---HHHHHhh-----------
Confidence 99999999999999999998887655 2 12223 22 99999999999 4443111
Q ss_pred CCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 012386 312 VPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRD 391 (465)
Q Consensus 312 ~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~ 391 (465)
.+..... . ....+++. ++..+..+..+++++++++|.+|+++++.++|
T Consensus 201 ~~~~~~~---~-----------------~~~~i~~~-----------a~~gd~~a~~~~~~~~~~la~~ianl~~~~~P- 248 (314)
T COG1940 201 LESEAGE---L-----------------TAKDIFEL-----------AAAGDPLAKEVIERAADYLARGLANLINLLDP- 248 (314)
T ss_pred ccccccC---c-----------------CHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 0110000 0 23334443 77888999999999999999999999999999
Q ss_pred CcCCCCCceEEEEEec-ceeccchhHHHHHHHHHHHHhccCC-Ccc-EEEEEe-CChhHHHHHHHHHH
Q 012386 392 TVRDGEKQKSVIALDG-GLFEHYTKFSACMQSTVKELLGEEV-SET-VVIEHS-NDGSGIGAALLAAS 455 (465)
Q Consensus 392 ~~~~~~~~~~~V~idG-sv~~~~~~f~~~l~~~l~~~~~~~~-~~~-v~l~~a-~Dgs~iGAAl~Aa~ 455 (465)
+ .|.++| ++....+.+.+.+++.+........ ... +.-.+. ++++++|||+++..
T Consensus 249 -------~--~IvigG~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ga~~~~~~ 307 (314)
T COG1940 249 -------E--VIVIGGGGVSALGDLLLPRLRKLLAKYLFPPVLRPRIVEAALGGNDAGLIGAALLALL 307 (314)
T ss_pred -------C--eEEEECcccccchhHHHHHHHHHHHHhhcchhcccchhhhhcccccccchhHHHHHHH
Confidence 4 577888 9999999999999999887765411 111 112233 79999999988754
|
|
| >PRK12408 glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.7e-22 Score=203.24 Aligned_cols=272 Identities=17% Similarity=0.126 Sum_probs=175.0
Q ss_pred CCCcce-eEEEEEeCCceEEEEEEEecCCc---ceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCC
Q 012386 90 TGDEKG-LFYALDLGGTNFRVLRVQLGGRE---GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVS 165 (465)
Q Consensus 90 ~G~E~G-~~LaiDlGGTNlRv~~V~l~g~~---~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~ 165 (465)
++-|++ .||++|+||||+|+++|+.++.. ..+... ++++.+ ..+. +.+.+.+|+++ .
T Consensus 10 ~~~~~~~~~L~~DIGGT~i~~al~d~~g~~~~~~~~~~~--~~~~t~------~~~~----~~~~i~~~~~~-~------ 70 (336)
T PRK12408 10 VAVPRPESFVAADVGGTHVRVALVCASPDAAKPVELLDY--RTYRCA------DYPS----LAAILADFLAE-C------ 70 (336)
T ss_pred ccCcccccEEEEEcChhhhheeEEeccCCccccccccce--eEecCC------CccC----HHHHHHHHHhc-C------
Confidence 445555 39999999999999999876631 112221 223322 1122 33345566654 1
Q ss_pred CCCcceeeeeeecc-cccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCC-eeEEEEEechHHHhhccccc--
Q 012386 166 PGRQRELGFTFSFP-VRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLD-MRVAALVNDTIGTLAGGRYH-- 241 (465)
Q Consensus 166 ~~~~~~lG~tfSfP-v~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~-v~v~alvNDtvatlla~~y~-- 241 (465)
.+...+|+++++| ++...+.. +.+.|. . +.+.|++.+ ++| | .|+||.++..+++++.
T Consensus 71 -~~~~~igIg~pG~~~~~g~v~~-~nl~w~---------~--~~~~l~~~~---~~~~V---~l~ND~naaa~gE~~~~~ 131 (336)
T PRK12408 71 -APVRRGVIASAGYALDDGRVIT-ANLPWT---------L--SPEQIRAQL---GLQAV---HLVNDFEAVAYAAPYMEG 131 (336)
T ss_pred -CCcCEEEEEecCCceECCEEEe-cCCCCc---------c--CHHHHHHHc---CCCeE---EEeecHHHHHcccccCCH
Confidence 1357899999998 43222222 223563 1 357788777 884 6 9999999999999876
Q ss_pred -----------CC-ceEEEEEEccccceeEEccCCCCcccCC---C-----CCCCC---------------ceeeeehhc
Q 012386 242 -----------NK-DAIAAVILGTGTNAAYVERAHAIPKWHG---L-----LPKSG---------------EMIFEKIIS 286 (465)
Q Consensus 242 -----------~~-~~~iglIlGTG~Na~yie~~~~i~k~~~---~-----~~~~g---------------~~~fEkm~S 286 (465)
+. .+.+.+++|||++++++.+++ .++++ + +++.+ .-|+|.++|
T Consensus 132 ~~~~~~~g~~~~~~~~~~~i~~GTGiGggivi~g~--~g~~~~agE~GH~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~S 209 (336)
T PRK12408 132 NQVLQLSGPAQAAAGPALVLGPGTGLGAALWIPNG--GRPVVLPTEAGQAALAAASELEMQLLQHLLRTRTHVPIEHVLS 209 (336)
T ss_pred hHeeeecCCCCCCCCcEEEEECCCcceEEEEEcCC--CceeeecCccccccCCCCCHHHHHHHHHHHhhCCceeHhheec
Confidence 23 578999999999999999876 33322 1 12221 127999999
Q ss_pred cccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHH-HHH
Q 012386 287 GMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLV-VEL 365 (465)
Q Consensus 287 G~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~-~~i 365 (465)
|+.|..+.+..... . +.. +..++ ...+++. ++.. +..
T Consensus 210 g~gL~~~~~~~~~~---~--------~~~---~~~~~-----------------~~~v~~~-----------a~~ggD~~ 247 (336)
T PRK12408 210 GPGLLNLYRALCAL---R--------GAT---PVHAS-----------------PAAITAA-----------ALAGDDAL 247 (336)
T ss_pred HHHHHHHHHHHHhh---c--------CCC---cccCC-----------------HHHHHHH-----------HHhCCCHH
Confidence 99996665543211 0 000 00011 1223332 4444 789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEE-EEEecceecc-chhHHHH--HHHHHHHHhccCCCccEEEEEe
Q 012386 366 CDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSV-IALDGGLFEH-YTKFSAC--MQSTVKELLGEEVSETVVIEHS 441 (465)
Q Consensus 366 a~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~-V~idGsv~~~-~~~f~~~--l~~~l~~~~~~~~~~~v~l~~a 441 (465)
|..++++.++++|.+|++++..++| + . |.++||+... .+.|.+. +++.+++...+...+.+.|..+
T Consensus 248 A~~~~~~~~~~La~~i~nl~~~ldP--------e--~GIvIGGGIs~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~I~~~ 317 (336)
T PRK12408 248 AHEALQVFCGFLGSVVGDMALAYGA--------R--GGVYLAGGILPQIADFLARSDFVERFLNKGPMRPALEQVPVKLV 317 (336)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCC--------C--ceEEEECchhHhHHhhhcCHHHHHHHhccCchhhHhcCCCEEEE
Confidence 9999999999999999999999999 4 4 7899999876 5666664 7777766533222233444444
Q ss_pred --CChhHHHHHHHH
Q 012386 442 --NDGSGIGAALLA 453 (465)
Q Consensus 442 --~Dgs~iGAAl~A 453 (465)
.|++++|||.++
T Consensus 318 ~~~~agl~GAa~~~ 331 (336)
T PRK12408 318 EHGQLGVLGAASWY 331 (336)
T ss_pred eCCChHHHHHHHHH
Confidence 689999998654
|
|
| >PRK00292 glk glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.6e-21 Score=193.59 Aligned_cols=266 Identities=17% Similarity=0.197 Sum_probs=175.7
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHh-hCCCCCCCCCCcceeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVAT-EGEGFHVSPGRQRELGF 174 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~-~~~~~~~~~~~~~~lG~ 174 (465)
++|++|+||||+|++++++.+. .++.. .+++.+. . +.+.+.+.+++++ .+ .+...+|+
T Consensus 3 ~~lgiDIGgT~i~~~l~~~~~~--~~~~~--~~~~~~~------~----~~~~~~l~~~l~~~~~-------~~~~gigI 61 (316)
T PRK00292 3 PALVGDIGGTNARFALCDWANG--EIEQI--KTYATAD------Y----PSLEDAIRAYLADEHG-------VQVRSACF 61 (316)
T ss_pred eEEEEEcCccceEEEEEecCCC--ceeee--EEEecCC------C----CCHHHHHHHHHHhccC-------CCCceEEE
Confidence 5899999999999999997443 23432 2444431 1 2244555666654 22 23678999
Q ss_pred eeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCC-eeEEEEEechHHHhhccccc------------
Q 012386 175 TFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLD-MRVAALVNDTIGTLAGGRYH------------ 241 (465)
Q Consensus 175 tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~-v~v~alvNDtvatlla~~y~------------ 241 (465)
++|+|++...+...++ .|. . + .+.|++.+ ++| | .++||+++..+++.+.
T Consensus 62 g~pG~vd~~~i~~~n~-~w~---------~-~-~~~l~~~~---~~p~v---~l~ND~~aaalgE~~~~~~~~~~~g~~~ 123 (316)
T PRK00292 62 AIAGPVDGDEVRMTNH-HWA---------F-S-IAAMKQEL---GLDHL---LLINDFTAQALAIPRLGEEDLVQIGGGE 123 (316)
T ss_pred EEeCcccCCEEEecCC-Ccc---------c-C-HHHHHHHh---CCCeE---EEEecHHHHHcccccCCHhheeEeCCCC
Confidence 9999997433333222 464 2 3 47788887 885 7 9999999999999752
Q ss_pred --CCceEEEEEEccccceeEEccCCCCcccCC---C-----CCCCC---------------ceeeeehhccccHHHHHHH
Q 012386 242 --NKDAIAAVILGTGTNAAYVERAHAIPKWHG---L-----LPKSG---------------EMIFEKIISGMYLGEIVRR 296 (465)
Q Consensus 242 --~~~~~iglIlGTG~Na~yie~~~~i~k~~~---~-----~~~~g---------------~~~fEkm~SG~YLGEi~R~ 296 (465)
+.+..+.+++|||++++++.++ +.++.+ + +++.+ .-|+|.++||..|.++.+.
T Consensus 124 ~~~~~~~~~v~~GTGiG~giv~~g--~~g~~g~agE~GH~~~~~~~~~~~~~~~~~c~~~~~gclE~~~Sg~~L~~~~~~ 201 (316)
T PRK00292 124 PVPGAPIAVIGPGTGLGVAGLVPV--DGRWIVLPGEGGHVDFAPRSEEEAQILQYLRAEFGHVSAERVLSGPGLVNLYRA 201 (316)
T ss_pred CCCCCcEEEEEcCCcceEEEEEec--CCceEEccCCcccccCCCCChHHHHHHHHHHHhcCCceeEeeecHHhHHHHHHH
Confidence 1367899999999999999886 444332 1 22222 2289999999999665443
Q ss_pred HHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHH-HHHHHHHHHHHH
Q 012386 297 VLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVV-ELCDIVATRGAR 375 (465)
Q Consensus 297 ~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~-~ia~~V~~RaA~ 375 (465)
.... .+ . ++ ..+ ...++++. ++..+ .+|..+++++++
T Consensus 202 ~~~~---~~-----~-~~-----~~~-----------------~~~~i~~~-----------a~~gdd~~A~~~~~~~~~ 239 (316)
T PRK00292 202 ICKA---DG-----R-EP-----ELL-----------------TPADITER-----------ALAGSCPLCRRTLSLFCV 239 (316)
T ss_pred HHhh---cC-----C-Cc-----ccC-----------------CHHHHHHH-----------HHhCCChHHHHHHHHHHH
Confidence 2111 00 0 00 000 12233333 66777 999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceec-cchhHHH-HHHHHHHHHh-ccC--CCccEEEEEeCChhHHHHH
Q 012386 376 LSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFE-HYTKFSA-CMQSTVKELL-GEE--VSETVVIEHSNDGSGIGAA 450 (465)
Q Consensus 376 l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~-~~~~f~~-~l~~~l~~~~-~~~--~~~~v~l~~a~Dgs~iGAA 450 (465)
++|.+|+++++.++|. . .|.+.||+.. ..+.|.+ .+++.+++.. .+. ....+.+...+|++++|||
T Consensus 240 ~lg~~i~~l~~~~~P~--------~-~vvi~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~agl~GAa 310 (316)
T PRK00292 240 ILGRVAGNLALTLGAR--------G-GVYIAGGIVPRFLEFFKASGFRAAFEDKGRFSAYLADIPVYVITHPQPGLLGAG 310 (316)
T ss_pred HHHHHHHHHHHHhcCC--------c-eEEEeCchHHhHHhhhccHHHHHHHhcCCChhhHHhcCCEEEEcCCChHHHHHH
Confidence 9999999999999992 1 3567888774 6666656 5566666532 121 1234556677999999998
Q ss_pred HHH
Q 012386 451 LLA 453 (465)
Q Consensus 451 l~A 453 (465)
.++
T Consensus 311 ~~~ 313 (316)
T PRK00292 311 AYL 313 (316)
T ss_pred HHH
Confidence 875
|
|
| >PRK13311 N-acetyl-D-glucosamine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.8e-19 Score=172.66 Aligned_cols=217 Identities=15% Similarity=0.202 Sum_probs=158.3
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
.|+++|+|||++|++++++.|+ ++.+. +++.|. .+.+++++.+.+.+.++..... ....+|++
T Consensus 1 ~~lgidiggt~i~~~l~d~~g~---i~~~~--~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~~~gIgv~ 63 (256)
T PRK13311 1 MYYGFDMGGTKIELGVFDENLQ---RIWHK--RVPTPR----EDYPQLLQILRDLTEEADTYCG--------VQGSVGIG 63 (256)
T ss_pred CEEEEEECCCcEEEEEECCCCC---EEEEE--EecCCC----cCHHHHHHHHHHHHHHHHhhcC--------CCceEEEE
Confidence 4799999999999999999884 66443 455553 2466788888887777743221 23579999
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCceEEEEEE
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVIL 251 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIl 251 (465)
+|+|++.. .+.+ .++ +.+++.+.|+++.|++.+ ++|| .+.||+++..+++.|. +.++.+++++
T Consensus 64 ~pG~vd~~---~g~i-~~~---~~~~w~~~~l~~~l~~~~---~~pV---~leNDanaaAlaE~~~g~~~~~~~~v~i~l 130 (256)
T PRK13311 64 IPGLPNAD---DGTV-FTA---NVPSAMGQPLQADLSRLI---QREV---RIDNDANCFALSEAWDPEFRTYPTVLGLIL 130 (256)
T ss_pred ecCcEECC---CCEE-Ecc---CCCcccCCChHHHHHHHH---CCCE---EEEchhhHHHHHHHHhcCCCCCCcEEEEEE
Confidence 99999642 2222 233 344455799999999999 8996 9999999999999884 4689999999
Q ss_pred ccccceeEEccCCCCcccCC---CC-----C-C---------------CCce-eeeehhccccHHHHHHHHHHHHhhccc
Q 012386 252 GTGTNAAYVERAHAIPKWHG---LL-----P-K---------------SGEM-IFEKIISGMYLGEIVRRVLCRMAEEAN 306 (465)
Q Consensus 252 GTG~Na~yie~~~~i~k~~~---~~-----~-~---------------~g~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~ 306 (465)
|||++++++.+++.+.+.++ ++ + . +|.. |+|.++|+..|.+..+ ...
T Consensus 131 gtGiG~giv~~G~l~~G~~g~AGEiGh~~v~~~~~~~~~~~~~~~~c~cG~~GclE~~~S~~ai~~~~~----~~~---- 202 (256)
T PRK13311 131 GTGVGGGLIVNGSIVSGRNHITGEFGHFRLPVDALDILGADIPRVPCGCGHRGCIENYISGRGFEWMYS----HFY---- 202 (256)
T ss_pred CcCeEEEEEECCEEecCCCCCCccceeEEeccCcccccccCCCCCcCCCCCccchhheecHHHHHHHHH----Hhc----
Confidence 99999999999988776554 21 1 1 1222 9999999998843221 110
Q ss_pred CCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012386 307 FFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILK 386 (465)
Q Consensus 307 lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~ 386 (465)
. . .+ ...++++. ++..++.|+.+++++++++|.+|+++++
T Consensus 203 ----~--~------~~-----------------~~~~l~~~-----------~~~gd~~a~~~~~~~~~~la~~i~nl~~ 242 (256)
T PRK13311 203 ----Q--H------TL-----------------PATDIIAH-----------YAAGEPKAVAHVERFMDVLAVCLGNLLT 242 (256)
T ss_pred ----c--C------CC-----------------CHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00 12233333 5667899999999999999999999999
Q ss_pred HhCC
Q 012386 387 KLGR 390 (465)
Q Consensus 387 ~~~~ 390 (465)
.+++
T Consensus 243 ~~~~ 246 (256)
T PRK13311 243 MLGS 246 (256)
T ss_pred HhCC
Confidence 9987
|
|
| >PRK14101 bifunctional glucokinase/RpiR family transcriptional regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.6e-18 Score=188.95 Aligned_cols=272 Identities=16% Similarity=0.181 Sum_probs=174.1
Q ss_pred ceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceee
Q 012386 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (465)
Q Consensus 94 ~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG 173 (465)
-|.+|++|+||||+|+++++.+|. +.... +++.+. ++.+.+.|.+|+++.+. .+...+|
T Consensus 17 ~~~~L~iDIGGT~ir~al~~~~g~---i~~~~--~~~t~~----------~~~~~~~i~~~l~~~~~------~~~~~ig 75 (638)
T PRK14101 17 DGPRLLADVGGTNARFALETGPGE---ITQIR--VYPGAD----------YPTLTDAIRKYLKDVKI------GRVNHAA 75 (638)
T ss_pred CCCEEEEEcCchhheeeeecCCCc---cccee--EEecCC----------CCCHHHHHHHHHHhcCC------CCcceEE
Confidence 356999999999999999976553 54322 333321 24456667777765431 2367899
Q ss_pred eeeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcc--------ccc----
Q 012386 174 FTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGG--------RYH---- 241 (465)
Q Consensus 174 ~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~--------~y~---- 241 (465)
|++++|++...+... .+.|. .++ +.|++.| |+|. +.++||.++..+++ .+.
T Consensus 76 ig~pGpVd~~~~~~~-nl~w~----------~~~-~~l~~~~---g~~~--v~l~ND~~aaA~ge~~l~~~e~~~~G~g~ 138 (638)
T PRK14101 76 IAIANPVDGDQVRMT-NHDWS----------FSI-EATRRAL---GFDT--LLVVNDFTALAMALPGLTDAQRVQVGGGT 138 (638)
T ss_pred EEEecCccCCeeeec-CCCcE----------ecH-HHHHHHc---CCCe--EEEEchHHHHHcCCccCCHHHeEEeCCCC
Confidence 999999986543332 33674 355 7788877 8862 59999999999995 332
Q ss_pred CCceEEEEEEcccccee---EE-ccCCCCc--ccCCC--CCCC---------------CceeeeehhccccHHHHHHHHH
Q 012386 242 NKDAIAAVILGTGTNAA---YV-ERAHAIP--KWHGL--LPKS---------------GEMIFEKIISGMYLGEIVRRVL 298 (465)
Q Consensus 242 ~~~~~iglIlGTG~Na~---yi-e~~~~i~--k~~~~--~~~~---------------g~~~fEkm~SG~YLGEi~R~~l 298 (465)
+.+..+.+++||||+.+ ++ .+++.+. .--|. +++. |..|+|.++||+.|.++.|...
T Consensus 139 ~~~~~~~~~lGtGTGlG~a~lv~~~g~~~~~g~E~GH~~~~~~~~~e~~~~~~~~~~~g~~~~E~~~Sg~gL~~~~~~~~ 218 (638)
T PRK14101 139 RRQNSVIGLLGPGTGLGVSGLIPADDRWIALGSEGGHASFAPQDEREDLVLQYARKKYPHVSFERVCAGPGMEIIYRALA 218 (638)
T ss_pred CCCCCcEEEEECCccceeeEEEecCCeeEECCCCccccCCCCCCHHHHHHHHHHHHhcCcceeeeecchhhHHHHHHHHH
Confidence 34567899997765444 32 4444221 11111 1211 2238999999999977766543
Q ss_pred HHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 012386 299 CRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSA 378 (465)
Q Consensus 299 ~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~a 378 (465)
.. . ..+ .+..++ ..++++. ++.++.+|..++++.++++|
T Consensus 219 ~~---~------~~~----~~~~~~-----------------~~~i~~~-----------a~~gd~~A~~~~~~~~~~lg 257 (638)
T PRK14101 219 AR---D------KKR----VAANVD-----------------TAEIVER-----------AHAGDALALEAVECFCAILG 257 (638)
T ss_pred hh---c------CCC----CcCcCC-----------------HHHHHHH-----------HHCCCHHHHHHHHHHHHHHH
Confidence 21 0 000 000011 2233333 66678999999999999999
Q ss_pred HHHHHHHHHhCCCCcCCCCCceEEEEEecceeccc-hhHHH-HHHHHHHHHhccC----CCccEEEEEeCChhHHHHHHH
Q 012386 379 AGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHY-TKFSA-CMQSTVKELLGEE----VSETVVIEHSNDGSGIGAALL 452 (465)
Q Consensus 379 agiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~-~~f~~-~l~~~l~~~~~~~----~~~~v~l~~a~Dgs~iGAAl~ 452 (465)
.++.+++..+++. + .|.++||+..+. +.|.+ .+.+++... ++- ..-.|.++..++.+++|||..
T Consensus 258 ~~~~nl~~~~~~p-------~--~vvigGGIs~~~~~~l~~~~f~~~f~~k-g~~~~~~~~ipv~~i~~~~~~l~Gaa~~ 327 (638)
T PRK14101 258 TFAGNLALTLGAL-------G--GIYIGGGVVPKLGELFTRSSFRARFEAK-GRFEAYLANIPTYLITAEYPAFLGVSAI 327 (638)
T ss_pred HHHHHHHHHhCCC-------C--cEEEeCcHHHHHHHHcChHHHHHHHHhC-CChHHHHhcCCEEEEeCCChhHHHHHHH
Confidence 9999999999831 3 578999998654 44432 455555432 110 124678888899999999765
Q ss_pred HH
Q 012386 453 AA 454 (465)
Q Consensus 453 Aa 454 (465)
+.
T Consensus 328 ~~ 329 (638)
T PRK14101 328 LA 329 (638)
T ss_pred HH
Confidence 53
|
|
| >TIGR00749 glk glucokinase, proteobacterial type | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.3e-18 Score=171.38 Aligned_cols=271 Identities=16% Similarity=0.193 Sum_probs=164.9
Q ss_pred EEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeee
Q 012386 98 YALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFS 177 (465)
Q Consensus 98 LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfS 177 (465)
|++|+||||+|+++++.++. ++... +.++. +.++.+.+.|.+|+++.+... .......|++.+
T Consensus 1 l~~DIGGT~i~~glvd~~g~---~l~~~----~~~~~-------~~~~~l~~~i~~~l~~~~~~~---~~~~~~~~Igi~ 63 (316)
T TIGR00749 1 LVGDIGGTNARLALCEIAPG---EISQA----KTYSG-------LDFPSLEAVVRVYLEEHKVEL---KDPIAKGCFAIA 63 (316)
T ss_pred CeEecCcceeeEEEEecCCC---ceeee----EEEec-------CCCCCHHHHHHHHHHhccccc---CCCcCeEEEEEe
Confidence 68999999999999987653 33221 11211 113455666667766533111 012456899999
Q ss_pred cccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCC-CeeEEEEEechHHHhhcc--------ccc----CCc
Q 012386 178 FPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGL-DMRVAALVNDTIGTLAGG--------RYH----NKD 244 (465)
Q Consensus 178 fPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl-~v~v~alvNDtvatlla~--------~y~----~~~ 244 (465)
+|++...+... .+.|. .++. .|++.+ ++ || .|+||.++..+++ .+. +.+
T Consensus 64 Gpv~~~~v~~~-nl~w~----------~~~~-~l~~~~---g~~~V---~l~ND~naaa~ge~~l~~~~~~~~g~~~~~~ 125 (316)
T TIGR00749 64 CPITGDWVAMT-NHTWA----------FSIA-ELKQNL---GFSHL---EIINDFTAVSYAIPGLKKEDLIQFGGAEPVE 125 (316)
T ss_pred CcccCCEEEec-CCCCe----------eCHH-HHHHhc---CCCeE---EEEecHHHHHcCCCCCCHHHeEEeCCCCCCC
Confidence 99854333322 33574 5674 777777 87 46 9999999999998 653 456
Q ss_pred eEEEEEEccccceeE--Ec---cCCCCcccCCC-----CCCCC---------------ceeeeehhccccHHHHHHHHHH
Q 012386 245 AIAAVILGTGTNAAY--VE---RAHAIPKWHGL-----LPKSG---------------EMIFEKIISGMYLGEIVRRVLC 299 (465)
Q Consensus 245 ~~iglIlGTG~Na~y--ie---~~~~i~k~~~~-----~~~~g---------------~~~fEkm~SG~YLGEi~R~~l~ 299 (465)
+.+.+++||||+.+. +. +++.+ .+.++ +++.+ .-|+|.++||+.|..+.|....
T Consensus 126 ~~~~v~lGtGtG~G~~~vi~~~~g~l~-~~agE~GH~~~~~~~~~~~~~~~~l~~~~~~g~~E~~~Sg~gl~~~~~~~~~ 204 (316)
T TIGR00749 126 GKPIAILGAGTGLGVAHLIHQVDGRWV-VLPGEGGHVDFAPNSELEAIILEYLRAKIGHVSAERVLSGPGLVNIYEALVK 204 (316)
T ss_pred CCcEEEEecCCCceeeEEEEcCCCCEE-ECCCCcccccCCCCCHHHHHHHHHHHHhcCCceeeeeecHHHHHHHHHHHHh
Confidence 788999977665554 55 55544 33333 12112 2389999999999777665432
Q ss_pred HHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHH-HHHHHHHHHHHHHHH
Q 012386 300 RMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVV-ELCDIVATRGARLSA 378 (465)
Q Consensus 300 ~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~-~ia~~V~~RaA~l~a 378 (465)
.. +...... .. . ..+ ..+.+++. ++..+ .+|..++++.++++|
T Consensus 205 ~~-----------~~~~~~~----------~~-~--~~~-~~~~I~~a-----------a~~Gdd~~A~~~~~~~~~~lg 248 (316)
T TIGR00749 205 AD-----------PERQFNK----------LP-Q--ENL-KPKDISER-----------ALAGSCTDCRRALSLFCVIYG 248 (316)
T ss_pred hc-----------Ccccccc----------cc-c--ccC-CHHHHHHH-----------HHcCCCHHHHHHHHHHHHHHH
Confidence 11 0000000 00 0 000 12344443 67776 899999999999999
Q ss_pred HHHHHHHHHhCCCCcCCCCCceEEEEEeccee-ccchhHHH-HHHHHHHHHhcc--C--CCccEEEEEeCChhHHHHH
Q 012386 379 AGIVGILKKLGRDTVRDGEKQKSVIALDGGLF-EHYTKFSA-CMQSTVKELLGE--E--VSETVVIEHSNDGSGIGAA 450 (465)
Q Consensus 379 agiaaii~~~~~~~~~~~~~~~~~V~idGsv~-~~~~~f~~-~l~~~l~~~~~~--~--~~~~v~l~~a~Dgs~iGAA 450 (465)
.++++++..++|. ...+ +.||+. +..+.+.+ .+.+.+++. ++ + ..-.|.+...++.+++|||
T Consensus 249 ~~i~nl~~~ldpe--------ggv~-v~GG~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~~~pv~~i~~~~~~l~G~~ 316 (316)
T TIGR00749 249 RFAGNLALNLGTR--------GGVY-IAGGIVPRFIEFFKASGFRAAFEDK-GRMKEYVHDIPVYVVLHDNPGLLGAG 316 (316)
T ss_pred HHHHHHHHHhCCC--------CcEE-EECcHHHhHHhhhCchHHHHHHhcc-CChhHHHhhCCEEEEcCCCccccCCC
Confidence 9999999999993 2234 555554 44444333 344433221 11 0 1236778888999999985
|
This model represents glucokinase of E. coli and close homologs, mostly from other proteobacteria, presumed to have equivalent function. This glucokinase is more closely related to a number of uncharacterized paralogs than to the glucokinase glcK (fromerly yqgR) of Bacillus subtilis and its closest homologs, so the two sets are represented by separate models. |
| >PF00480 ROK: ROK family; InterPro: IPR000600 A family of bacterial proteins has been described which groups transcriptional repressors, sugar kinases and yet uncharacterised open reading frames [] | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.7e-16 Score=142.33 Aligned_cols=160 Identities=23% Similarity=0.372 Sum_probs=126.2
Q ss_pred EEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeec
Q 012386 99 ALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSF 178 (465)
Q Consensus 99 aiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSf 178 (465)
+||+|+|+++++++++.|+ ++.+. ++++| .+.+++++.+.+.+.+++.+... . .+|+++|+
T Consensus 1 gidig~~~i~~~l~d~~g~---ii~~~--~~~~~-----~~~~~~~~~l~~~i~~~~~~~~~--------~-gIgi~~pG 61 (179)
T PF00480_consen 1 GIDIGGTSIRIALVDLDGE---IIYSE--SIPTP-----TSPEELLDALAELIERLLADYGR--------S-GIGISVPG 61 (179)
T ss_dssp EEEEESSEEEEEEEETTSC---EEEEE--EEEHH-----SSHHHHHHHHHHHHHHHHHHHTC--------E-EEEEEESS
T ss_pred CEEECCCEEEEEEECCCCC---EEEEE--EEECC-----CCHHHHHHHHHHHHHHHHhhccc--------c-cEEEeccc
Confidence 6999999999999999885 77554 56666 36889999999999999987642 2 89999999
Q ss_pred ccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCceEEEEEEccc
Q 012386 179 PVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTG 254 (465)
Q Consensus 179 Pv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIlGTG 254 (465)
|++... +.++... .+++.+.|+.+.|++.+ ++|| .+.||+++.++++.+. +.++.+.+.+|||
T Consensus 62 ~v~~~~---g~i~~~~----~~~~~~~~l~~~l~~~~---~~pv---~i~Nd~~~~a~ae~~~~~~~~~~~~~~l~ig~G 128 (179)
T PF00480_consen 62 IVDSEK---GRIISSP----NPGWENIPLKEELEERF---GVPV---IIENDANAAALAEYWFGAAKDCDNFLYLYIGTG 128 (179)
T ss_dssp EEETTT---TEEEECS----SGTGTTCEHHHHHHHHH---TSEE---EEEEHHHHHHHHHHHHSTTTTTSSEEEEEESSS
T ss_pred cCcCCC---CeEEecC----CCCcccCCHHHHhhccc---ceEE---EEecCCCcceeehhhcCccCCcceEEEEEeecC
Confidence 997643 3332222 13445799999999999 8996 9999999999999873 4579999999999
Q ss_pred cceeEEccCCCCcccCCC--------CCC------CCce-eeeehhccccH
Q 012386 255 TNAAYVERAHAIPKWHGL--------LPK------SGEM-IFEKIISGMYL 290 (465)
Q Consensus 255 ~Na~yie~~~~i~k~~~~--------~~~------~g~~-~fEkm~SG~YL 290 (465)
++++++.+++.+.+.++. +++ .|.. |+|.++|+..|
T Consensus 129 iG~~ii~~g~i~~G~~~~aGeigh~~~~~~~~~c~cG~~GClE~~~S~~Al 179 (179)
T PF00480_consen 129 IGAGIIINGKIYRGSNGFAGEIGHMPVDPNGEPCYCGNRGCLETYASGRAL 179 (179)
T ss_dssp EEEEEEETTEEETTTTS-TTGGGGSBSSTTSSB-TTSSBSBHHHHHSHHHH
T ss_pred CCcceecccccccCCCccccceeeeeccCCCCcCCCCCcCcHHHhhChhhC
Confidence 999999999888776542 122 2333 99999999765
|
This family, known as ROK (Repressor, ORF, Kinase) includes the xylose operon repressor, xylR, from Bacillus subtilis, Lactobacillus pentosus and Staphylococcus xylosus; N-acetylglucosamine repressor, nagC, from Escherichia coli; glucokinase 2.7.1.2 from EC from Streptomyces coelicolor; fructokinase 2.7.1.4 from EC from Pediococcus pentosaceus, Streptococcus mutans and Zymomonas mobilis; allokinase 2.7.1.55 from EC and mlc from E. coli; and E. coli hypothetical proteins yajF and yhcI and the corresponding Haemophilus influenzae proteins. The repressor proteins (xylR and nagC) from this family possess an N-terminal region not present in the sugar kinases and which contains an helix-turn-helix DNA-binding motif.; PDB: 2GUP_A 3LM2_B 3EO3_A 2YHY_A 2YHW_A 2YI1_A 3MCP_A 1Z05_A 3HTV_A 3OHR_A .... |
| >PTZ00288 glucokinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.6e-12 Score=131.39 Aligned_cols=284 Identities=18% Similarity=0.112 Sum_probs=168.4
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
++++.|+||||.|+++.++...+....... .++.+ ++..+..++.+++++.+....+.... . .......|.
T Consensus 27 ~~~~~DiGgt~~R~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~-~----~~~~~a~iA 97 (405)
T PTZ00288 27 IFVGCDVGGTNARVGFAREVQHDDSGVHII--YVRFN--VTKTDIRELLEFFDEVLQKLKKNLSF-I----QRVAAGAIS 97 (405)
T ss_pred eEEEEEecCCceEEEEEeccCCCCCceeEE--EEecc--cccccHHHHHHHHHHHHHHHHhcCcc-c----cCcCeEEEE
Confidence 799999999999999999832111122111 34454 11245667888888877776553210 0 234556888
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc--------------
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH-------------- 241 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~-------------- 241 (465)
..+|+....+ .|+..+|+..+.+++. +- .+ | ++ .-+.++||=.|..++....
T Consensus 98 vAGPV~~~~~-~~~~~~~~~~~~lTNl---pw--~i---~---~~--~~~~liNDfeA~aygi~~l~~~~~~~~~f~~~~ 163 (405)
T PTZ00288 98 VPGPVTGGQL-AGPFNNLKGIARLTDY---PV--EL---F---PP--GRSALLNDLEAGAYGVLAVSNAGRLSEYFKVMW 163 (405)
T ss_pred EeCceeCCEe-eccccccccccccCCC---Cc--hh---c---CC--CeEEEEEhHHHHhCcccccChhhcccccccccc
Confidence 8999954321 2345677755555542 11 01 3 44 3369999998888775421
Q ss_pred ------------------CCceEEEEEEccccceeEEccCCCCcccCC------C--CCC-CC-----------------
Q 012386 242 ------------------NKDAIAAVILGTGTNAAYVERAHAIPKWHG------L--LPK-SG----------------- 277 (465)
Q Consensus 242 ------------------~~~~~iglIlGTG~Na~yie~~~~i~k~~~------~--~~~-~g----------------- 277 (465)
+....+.+.+|||.|+|++.+...+.++.. . ++. ++
T Consensus 164 ~~~~~~~l~~~~~~g~~~~~~~~~Vlg~GTGLG~alli~~~l~~G~~~~agEgGHv~~~~~~~~~~~~g~~l~~~l~~~~ 243 (405)
T PTZ00288 164 KGTQWDALSEGKPAGSVIGRGRCMVLAPGTGLGSSLIHYVGVSDQYIVIPLECGHLSISWPANEDSDYVQALAGYLASKA 243 (405)
T ss_pred cccceeeecCCCCCcccCCCCCEEEEEeccceeEEEEECCeecCCcccccccccceeeccCCCCccchhHHHHHHHHhhh
Confidence 223458899999999999998775554432 1 210 11
Q ss_pred ---------ceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhh
Q 012386 278 ---------EMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDI 348 (465)
Q Consensus 278 ---------~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~ 348 (465)
..++|.++||+.|..+.+.... . ..++ . -.. ...++.+.
T Consensus 244 ~~~g~~~~~~vs~E~v~SG~GL~~ly~~l~~----~------~~~~-~---~~~-----------------~~a~ia~~- 291 (405)
T PTZ00288 244 LSKGIDSTVYPIYEDIVSGRGLEFNYAYEKR----G------NKPS-A---PLK-----------------EAAEVAKL- 291 (405)
T ss_pred ccccccccCceeEeEEecHHHHHHHHHHHhc----c------CCCc-c---CcC-----------------CHHHHHHH-
Confidence 2389999999999666553211 0 0000 0 000 11122221
Q ss_pred hccCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceec-cchhHHH-----HHH
Q 012386 349 LEISNTSLKMRK-LVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFE-HYTKFSA-----CMQ 421 (465)
Q Consensus 349 ~~~~~~~~~d~~-~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~-~~~~f~~-----~l~ 421 (465)
+. ..+..|..++++.+++++.++.+++..++| + .|.+.||+.. ..+.|.+ .++
T Consensus 292 ----------A~~~gD~~A~~al~~f~~~LG~~~~nlal~l~P--------~--~VvIgGGi~~~~~~~l~~~~~~~f~~ 351 (405)
T PTZ00288 292 ----------AKYGSDVAAVKAMKRHYKYLMRLAAEISMQFLP--------L--TVVLMGDNIVYNSFFFDNPENVKQLQ 351 (405)
T ss_pred ----------HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------C--EEEEECccHHhhHHHHhccchHHHHH
Confidence 22 256789999999999999999999999999 3 2556665444 3333321 222
Q ss_pred HHH-------HHHhccCCCccEEE-EEeCChhHHHHHHHHHHhc
Q 012386 422 STV-------KELLGEEVSETVVI-EHSNDGSGIGAALLAASHS 457 (465)
Q Consensus 422 ~~l-------~~~~~~~~~~~v~l-~~a~Dgs~iGAAl~Aa~~~ 457 (465)
... .+++. .-.|.+ +...+-+++|||..+...+
T Consensus 352 ~f~~~~k~~r~~~l~---~ipv~~qv~~~~~gL~Gaa~~a~~~~ 392 (405)
T PTZ00288 352 ARITEHKMERLKFLS---RTTFLRQKKSVNLNLLGCLQFGSQLS 392 (405)
T ss_pred HHHhcCccChHHHHh---cCceEEEEeCCCccHHHHHHHHHHhh
Confidence 211 12221 124444 5669999999998876443
|
|
| >PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.7e-10 Score=112.57 Aligned_cols=268 Identities=20% Similarity=0.236 Sum_probs=158.5
Q ss_pred EEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeee
Q 012386 98 YALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFS 177 (465)
Q Consensus 98 LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfS 177 (465)
||||.|||+.|+.+++.+|+ ++.+. ..-|.+....+.++..+.|.+.+.+++.+.+... .+...+.++.+
T Consensus 1 lGIDgGgTkt~~vl~d~~g~---il~~~---~~~~~n~~~~~~~~~~~~i~~~i~~~~~~~~~~~----~~i~~~~~g~a 70 (271)
T PF01869_consen 1 LGIDGGGTKTKAVLVDENGN---ILGRG---KGGGANYNSVGFEEAMENIKEAIEEALSQAGLSP----DDIAAICIGAA 70 (271)
T ss_dssp EEEEECSSEEEEEEEETTSE---EEEEE---EES-TTHHHHHHHHHHHHHHHHHHHHHHHHTTST----TCCCEEEEEEE
T ss_pred CEEeeChheeeeEEEeCCCC---EEEEE---EeCCCCCCCCCcchhhhHHHHHHHHHHHHcCCCc----cccceeeeeEe
Confidence 79999999999999998874 55432 2344444333457778888888899988766432 22223333333
Q ss_pred cccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCCceEEEEEEccccce
Q 012386 178 FPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNA 257 (465)
Q Consensus 178 fPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na 257 (465)
+--.+ +. ..+...+.+.. + +.+.||+...+.+..- +.-|-+|-|||+++
T Consensus 71 G~~~~---------------------~~-~~~~~~~~~~~---~---v~~~~Da~~al~~~~~---~~giv~I~GTGS~~ 119 (271)
T PF01869_consen 71 GYGRA---------------------GD-EQEFQEEIVRS---E---VIVVNDAAIALYGATA---EDGIVVIAGTGSIA 119 (271)
T ss_dssp EEEET---------------------TT-TTHHHHHHHHH---E---EEEEEHHHHHHHHHST---SSEEEEEESSSEEE
T ss_pred eecCc---------------------cc-ccchhhcceEE---E---EEEEHHHHHHhCCCCC---CcEEEEEcCCCceE
Confidence 22111 00 00111122211 4 4899999887777544 46789999999999
Q ss_pred eEEccCCC---CcccCCCCCCCCceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCC
Q 012386 258 AYVERAHA---IPKWHGLLPKSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDT 334 (465)
Q Consensus 258 ~yie~~~~---i~k~~~~~~~~g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~ 334 (465)
..+.+... +.+|...+. ---||.++ .|++|....++.. +..++....+ ......++.+
T Consensus 120 ~~~~~~g~~~r~gG~G~~~g--------D~GSg~~i---g~~~L~~~~~~~d---~~~~~~~~~~-~~~~~~~A~f---- 180 (271)
T PF01869_consen 120 YGRDRDGRVIRFGGWGHCLG--------DEGSGYWI---GRRALRAVLRELD---GRAEPTPYAK-PASNARIAVF---- 180 (271)
T ss_dssp EEEETTSEEEEEEESCTTTT--------TTTSHHHH---HHHHHHHHHHHHT---TSSTTSHHHH-TT-HHHHHCT----
T ss_pred EEEEcCCcEEEeCCCCCCcC--------CCCcHHHH---HHHHHhHHHHHhc---CccccCcccC-CCChhheehh----
Confidence 99873332 234443222 22244455 4555554443311 1111111000 0011111111
Q ss_pred CcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccch
Q 012386 335 SPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYT 414 (465)
Q Consensus 335 s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~ 414 (465)
...++ +.++..+..|..|++++++.++.-+.+++.+.+... + .|++-||++++.+
T Consensus 181 ------a~~v~-----------~~a~~gd~~a~~Il~~a~~~la~~i~~~~~~~~~~~------~--~v~l~GGv~~~~~ 235 (271)
T PF01869_consen 181 ------APTVF-----------EAAQQGDEVARDILAEAADELAELIKAVLKRLGPEK------E--PVVLSGGVFKNSP 235 (271)
T ss_dssp ------HHHHH-----------HHHHTTTHHHHHHHHHHHHHHHHHHHHHHHTCTCCC------C--SEEEESGGGGCHH
T ss_pred ------hHHHH-----------HHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC------C--eEEEECCccCchH
Confidence 11111 336778999999999999999999999999887631 2 2889999998755
Q ss_pred hHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHH
Q 012386 415 KFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLA 453 (465)
Q Consensus 415 ~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~A 453 (465)
|.+.+++.|++.+... ....+...+.-+.+|||++|
T Consensus 236 -~~~~l~~~l~~~~~~~--~~~~~~~~~~~~a~GAallA 271 (271)
T PF01869_consen 236 -LVKALRDALKEKLPKV--PIIIPVEPQYDPAYGAALLA 271 (271)
T ss_dssp -HHHHHGGGS-HHHHCC--TCECECCGSSHHHHHHHHHH
T ss_pred -HHHHHHHHHHHhcCCC--ceEECCCCCccHHHHHHHhC
Confidence 5566777776665432 22345667889999999986
|
The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase (P11568 from SWISSPROT). The hypothetical protein AQ_278 from Aquifex aeolicus O66634 from SWISSPROT contains two copies of this region suggesting that the family may structurally dimerise.; PDB: 2E2N_B 2E2Q_A 2E2P_B 2E2O_A 1ZBS_A 2CH6_A 2CH5_D 1ZC6_A 1HUX_A. |
| >KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.5e-09 Score=103.68 Aligned_cols=309 Identities=17% Similarity=0.213 Sum_probs=178.2
Q ss_pred ceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceee
Q 012386 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (465)
Q Consensus 94 ~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG 173 (465)
.+.|.++|=|+|.-|+.+|+..++ +..+.+ .-.+..-..+.+..-+.|++.|.+...+.+.+. +.....+|
T Consensus 2 ~~~y~GvEGgaT~s~~Vivd~~~~---~~~~a~---~~~Tnh~~ig~~~~~~rie~~i~~A~~k~g~d~---~~~lr~lg 72 (336)
T KOG1794|consen 2 KDFYGGVEGGATCSRLVIVDEDGT---ILGRAV---GGGTNHWLIGSTTCASRIEDMIREAKEKAGWDK---KGPLRSLG 72 (336)
T ss_pred CceeEeecCCcceeEEEEECCCCC---EeeEee---ccccccccCCchHHHHHHHHHHHHHHhhcCCCc---cCccceee
Confidence 468999999999999999998774 443321 111111111234455666666666655555432 13367888
Q ss_pred eeeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCCceEEEEEEcc
Q 012386 174 FTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGT 253 (465)
Q Consensus 174 ~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGT 253 (465)
+.+|+- +|.. | +.++++.|++.+. --++=..|.||+.+++++. +.+...=|-+|-||
T Consensus 73 L~lSg~-d~e~----------~--------~~~lv~~~R~~fp---s~ae~~~v~sDa~~sl~a~-t~g~~~GiVLiaGT 129 (336)
T KOG1794|consen 73 LGLSGT-DQED----------K--------NRKLVTEFRDKFP---SVAENFYVTSDADGSLAAA-TPGGEGGIVLIAGT 129 (336)
T ss_pred eecccC-Cchh----------H--------HHHHHHHHHHhcc---chhheeeeehhHHHHHhhc-CCCCCCcEEEEecC
Confidence 888875 3321 1 3556666666552 1123358999999999886 55556668899999
Q ss_pred ccceeEEccCCCCc---ccCCCCCCCCceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhc
Q 012386 254 GTNAAYVERAHAIP---KWHGLLPKSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAM 330 (465)
Q Consensus 254 G~Na~yie~~~~i~---k~~~~~~~~g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i 330 (465)
|+|+=.+.+..... +|.+.+-..| |+.|+ .|.++.-....-.=|+.. +.++ ..-...|...
T Consensus 130 gs~crl~~~DGs~~~~ggwg~~iGd~G--------Saywi---a~~Avq~vfda~dg~e~~-~~~i----~~v~~tif~~ 193 (336)
T KOG1794|consen 130 GSNCRLVNPDGSEKGAGGWGHMIGDGG--------SAYWI---ARQAVQMVFDAEDGFENM-MDKI----KDVKQTIFKH 193 (336)
T ss_pred CceeEEECCCCCccCCCCCCCccCCCc--------chhhh---hhhhhhheeehhcCcccc-cchH----HHHHHHHHHH
Confidence 99987776644433 3333332222 33344 444443322110001100 0000 0000111111
Q ss_pred ccCCCcCHHHHHHHHhhhhcc---CCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEE
Q 012386 331 HHDTSPDLRVVGKKLKDILEI---SNTS---LKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIA 404 (465)
Q Consensus 331 ~~d~s~~~~~~~~il~~~~~~---~~~~---~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~ 404 (465)
...++ .++.....+.+ |.- ...+ .+.+++++++++.|.++|+..+|--+.|++..+.|... .....-|.
T Consensus 194 ~~l~d-~l~ml~~~Ys~-f~k~riA~f~~kla~~ae~Gd~~~~~ifr~Ag~~Lg~~V~aVl~~l~~~~k---~g~~l~Iv 268 (336)
T KOG1794|consen 194 FNLRD-RLQMLEHLYSD-FDKHRIALFTEKLAEHAEIGDPLSAEIFRNAGETLGRHVVAVLPQLPPTLK---KGKTLPIV 268 (336)
T ss_pred cCCCC-HHHHHHHHHhc-chHHHHHHHHHHHHhhhhccCHHHHHHHHHHHHHHHHHHHHHHhhcCchhc---ccCcceEE
Confidence 11110 00011000000 000 0000 14478899999999999999999999999999988432 11245688
Q ss_pred EecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHHHHhcc
Q 012386 405 LDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 458 (465)
Q Consensus 405 idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~Aa~~~~ 458 (465)
+-|||+..++.+.+-....+... +.-+.+++..-.+.|-+|||++||-...
T Consensus 269 ~vG~V~~Sw~~l~~Gfl~sls~~---~~f~~~~l~~~k~ssAvgAA~laa~~~~ 319 (336)
T KOG1794|consen 269 CVGGVFDSWDLLQEGFLDSLSDT---RGFERVELYRPKESSAVGAAILAASLDN 319 (336)
T ss_pred EEcchhhHHHHHHHHHHHHhhcc---cCccceEEEeecccchHHHHHHhhhhcc
Confidence 99999999998887777766552 2235678877789999999999986543
|
|
| >PF02685 Glucokinase: Glucokinase; InterPro: IPR003836 Glucokinases 2 | Back alignment and domain information |
|---|
Probab=99.01 E-value=8.2e-09 Score=104.25 Aligned_cols=273 Identities=19% Similarity=0.198 Sum_probs=147.7
Q ss_pred EEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeee
Q 012386 98 YALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFS 177 (465)
Q Consensus 98 LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfS 177 (465)
|+-|+||||.|+++++..+...++... ++|+.. +...|.+. |.+|+++..... .+.....|.+.
T Consensus 1 Lv~DIGGTn~Rlal~~~~~~~~~~~~~--~~~~~~------~~~s~~~~----l~~~l~~~~~~~----~~p~~~~iavA 64 (316)
T PF02685_consen 1 LVADIGGTNTRLALAEPDGGPLQLIDI--RRYPSA------DFPSFEDA----LADYLAELDAGG----PEPDSACIAVA 64 (316)
T ss_dssp EEEEEETTEEEEEEEECTCGG-EEEEE--EEEEGC------CCCHHHHH----HHHHHHHTCHHH----TCEEEEEEEES
T ss_pred CeEEeCcccEEEEEEEcCCCCcccccc--EEEecC------CcCCHHHH----HHHHHHhcccCC----CccceEEEEEe
Confidence 577999999999999987753223322 233322 23344444 455555321100 23566999999
Q ss_pred cccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc-------------C-C
Q 012386 178 FPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH-------------N-K 243 (465)
Q Consensus 178 fPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~-------------~-~ 243 (465)
+|+....+.- ++..|+ .+ .+.|++.| +++ -+.++||=.|..++--.. . .
T Consensus 65 GPV~~~~~~l-TN~~W~----------i~-~~~l~~~l---g~~--~v~liNDfeA~a~gl~~L~~~~l~~l~~g~~~~~ 127 (316)
T PF02685_consen 65 GPVRDGKVRL-TNLPWT----------ID-ADELAQRL---GIP--RVRLINDFEAQAYGLPALDPEDLVTLQPGEPDPG 127 (316)
T ss_dssp S-EETTCEE--SSSCCE----------EE-HHHCHCCC---T-T--CEEEEEHHHHHHHHHHHHHHCCECCHCCEESSTT
T ss_pred cCccCCEEEe-cCCCcc----------cc-HHHHHHHh---CCc--eEEEEcccchheeccCCCCHHHeeeccCCCCCCC
Confidence 9997533211 223565 33 23344444 665 259999998887765431 1 2
Q ss_pred ceEEEEEEccccceeEEccCCCC----cccCCC--CCCC---------------CceeeeehhccccHHHHHHHHHHHHh
Q 012386 244 DAIAAVILGTGTNAAYVERAHAI----PKWHGL--LPKS---------------GEMIFEKIISGMYLGEIVRRVLCRMA 302 (465)
Q Consensus 244 ~~~iglIlGTG~Na~yie~~~~i----~k~~~~--~~~~---------------g~~~fEkm~SG~YLGEi~R~~l~~~~ 302 (465)
....-+=.|||.|.|++.+...- |.=.|. +++. +...+|..+||+.|..|.+-.....
T Consensus 128 ~~~~Vig~GTGLG~a~l~~~~~~~~v~~sEgGH~~fap~~~~e~~l~~~l~~~~~~vs~E~vlSG~GL~~ly~~l~~~~- 206 (316)
T PF02685_consen 128 GPRAVIGPGTGLGVALLVPDGDGYYVLPSEGGHVDFAPRTDEEAELLRFLRRRYGRVSVERVLSGRGLENLYRFLAGER- 206 (316)
T ss_dssp S-EEEEEESSSEEEEEEEEETTEEEEEEE-GGGSB---SSHHHHHHHHHHHHHCTS-BHHHCSSHHHHHHHHHHHHCCT-
T ss_pred CcEEEEEcCCCcEEEEEEecCCceEeCCCccccccCCCCCHHHHHHHHHHHHhcCCceeEeecchhhHHHHHHHHHhcc-
Confidence 34444557899999999875421 111111 1111 2238899999999966544332110
Q ss_pred hcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012386 303 EEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIV 382 (465)
Q Consensus 303 ~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagia 382 (465)
..++. .. ...+|.+.. .+..+.+|...++...++++....
T Consensus 207 --------~~~~~-----~~-----------------~~~~I~~~A----------~~~~d~~a~~al~~f~~~lg~~ag 246 (316)
T PF02685_consen 207 --------GAEPP-----LL-----------------SAAEISAAA----------LEGGDPLAREALDLFARILGRVAG 246 (316)
T ss_dssp --------T--S--------------------------HHHHHHHH----------HCT--HHHHHHHHHHHHHHHHHHH
T ss_pred --------CCCCC-----CC-----------------CHHHHHHHH----------HcCCCHHHHHHHHHHHHHHHHHHH
Confidence 00000 01 122222220 123568999999999999999999
Q ss_pred HHHHHhCCCCcCCCCCceEEEEEecceeccchhHHH--HHHHHHHHHhcc--C--CCccEEEEEeCChhHHHHHHHHH
Q 012386 383 GILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSA--CMQSTVKELLGE--E--VSETVVIEHSNDGSGIGAALLAA 454 (465)
Q Consensus 383 aii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~--~l~~~l~~~~~~--~--~~~~v~l~~a~Dgs~iGAAl~Aa 454 (465)
.+.-.+.+. . -|=+.||+..+...+.+ ...+.+.+. ++ + ..-.|.+...++.+++|||..|.
T Consensus 247 dlaL~~~a~-------g--GvyiaGGI~~~~~~~l~~~~F~~~F~~k-g~~~~~l~~iPv~li~~~~~gL~Gaa~~a~ 314 (316)
T PF02685_consen 247 DLALTFLAR-------G--GVYIAGGIAPRLLPLLDESAFREAFEDK-GRMSDLLEDIPVYLITDPDAGLLGAAAYAR 314 (316)
T ss_dssp HHHHHHT-T-------C--EEEEE-TTGGGGHHHHHCSSHHHHHH---GGGHHHHTT--EEEE--S-HHHHHHHHHHH
T ss_pred HHHHHhCCC-------e--eEEEecchhhHHHHHcChhHHHHHHhcc-CCcHHHHhcCcEEEEeCCCHHHHHHHHHHh
Confidence 999888873 2 36689999877765444 122222111 10 0 12367788889999999998874
|
7.1.2 from EC are found in invertebrates and microorganisms and are highly specific for glucose. These enzymes phosphorylate glucose using ATP as a donor to give glucose-6-phosphate and ADP [].; GO: 0004340 glucokinase activity, 0005524 ATP binding, 0006096 glycolysis, 0051156 glucose 6-phosphate metabolic process; PDB: 1SZ2_B 1Q18_B 2Q2R_B. |
| >TIGR02707 butyr_kinase butyrate kinase | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.6e-08 Score=100.21 Aligned_cols=261 Identities=14% Similarity=0.150 Sum_probs=144.6
Q ss_pred EEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHH---HHHHHHHHhhCCCCCCCCCCcceee
Q 012386 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIA---AALAKFVATEGEGFHVSPGRQRELG 173 (465)
Q Consensus 97 ~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia---~~I~~fl~~~~~~~~~~~~~~~~lG 173 (465)
.|+|..|||++|+++++-++. +..+.. ....+++ ++++.+.+.+. +.|.+++++++... .+...+
T Consensus 2 il~in~Gsts~k~alf~~~~~---~~~~~~--~~~~~~~--~~~~~~~~q~~~r~~~i~~~l~~~~~~~----~~i~av- 69 (351)
T TIGR02707 2 ILVINPGSTSTKLAVFEDERP---LFEETL--RHSVEEL--GRFKNVIDQFEFRKQVILQFLEEHGISI----SKLDAV- 69 (351)
T ss_pred EEEEecCchhheEEEEeCCCc---eeeeee--cCCHHHh--cccccHHHHHHHHHHHHHHHHHHcCCCc----ccccEE-
Confidence 689999999999999988663 443321 1111222 45667788888 88889998765421 234444
Q ss_pred eeeecccccccCCceE-Ee------ccCCccccCCCCCCcHHHHHHHHHHH-cCCCeeEEEEEec---------hHHHhh
Q 012386 174 FTFSFPVRQTSIASGD-LI------KWTKGFSIEDTVGEDVVGELTKAMER-IGLDMRVAALVND---------TIGTLA 236 (465)
Q Consensus 174 ~tfSfPv~q~~i~~g~-Li------~wtKgF~~~~~~g~dv~~~L~~al~~-~gl~v~v~alvND---------tvatll 236 (465)
..-++|++.. .-|. ++ .-........ =.++..++-..+.+ .++|. ++.|| +..+.+
T Consensus 70 ~~RgG~~~~v--~Gg~~~v~~~~~~~l~~~~~~~~--~hn~~~~~~~~~~~~~~~p~---~vfDt~fh~~~~~~a~~~al 142 (351)
T TIGR02707 70 VGRGGLLKPI--PGGTYLVNEAMLEDLKSGKRGEH--ASNLGAIIANELADELNIPA---YIVDPVVVDEMEDVARISGL 142 (351)
T ss_pred EECCCCCcee--cceeEEECHHHHHHHHhcCCCCC--CCCHHHHHHHHHHHHcCCCE---EEcCChhhhcChHHHHHhcc
Confidence 3344454321 1111 00 0000000000 11222222222222 36775 57777 555555
Q ss_pred ccc---------------------c-cC--CceEEEEEEccccceeEEccCCCCcccCCCCCC-------CCcee---ee
Q 012386 237 GGR---------------------Y-HN--KDAIAAVILGTGTNAAYVERAHAIPKWHGLLPK-------SGEMI---FE 282 (465)
Q Consensus 237 a~~---------------------y-~~--~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~-------~g~~~---fE 282 (465)
.+. . .+ ..+.|.+.||||+++|.+.+++.+.+..+.-++ .|.+. ..
T Consensus 143 pe~~RrygfHgls~~~v~~~~~~~~g~~~~~~~~I~~hLGtGig~~ai~~Gk~vdgs~G~agEg~~~~tr~G~id~~~~~ 222 (351)
T TIGR02707 143 PEIERKSIFHALNQKAVARRIAKELGKRYEEMNLIVAHMGGGISVAAHRKGRVIDVNNALDGEGPFSPERSGTLPLGDLV 222 (351)
T ss_pred chhhhhhchhhhhHHHHHHHHHHHcCCCcccCCEEEEEeCCCceeeeEECCEEEEcCCCCCCcCCcccCccCCCCchhHH
Confidence 433 0 12 348999999999999999999887765552211 12110 00
Q ss_pred ehh-cc-ccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHH
Q 012386 283 KII-SG-MYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRK 360 (465)
Q Consensus 283 km~-SG-~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~ 360 (465)
.++ .| +-.-|+ ...+.+.+.|.+ +. . +.| .+++++. ++
T Consensus 223 ~~~~~~~~s~~el----~~~l~~~sGl~~--------------------~~-g-s~d---~reI~~~-----------a~ 262 (351)
T TIGR02707 223 DLCYSGKYTKEEM----KKKIVGNGGLVA--------------------YL-G-TND---AREVEKR-----------IE 262 (351)
T ss_pred HHHhcCCCCHHHH----HHHHHhccCccc--------------------cc-C-CCC---HHHHHHH-----------HH
Confidence 000 00 000010 111111111110 00 0 011 2223322 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHH
Q 012386 361 LVVELCDIVATRGARLSAAGIVGILKKL--GRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKEL 427 (465)
Q Consensus 361 ~~~~ia~~V~~RaA~l~aagiaaii~~~--~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~ 427 (465)
.+++.|+.+++..++.++.+|++++..+ +| + .|+++||+.+. +.|++.+.+.++.+
T Consensus 263 ~GD~~A~~a~d~~~~~la~~Ia~l~~~l~g~p--------D--~IV~gGGI~e~-~~l~~~I~~~l~~~ 320 (351)
T TIGR02707 263 AGDEKAKLILDAMAYQIAKEIGKMAVVLKGKV--------D--AIVLTGGLAYS-KYFVSEIIKRVSFI 320 (351)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCC--------C--EEEEcchhhcC-HHHHHHHHHHHHhh
Confidence 6778899999999999999999999999 55 4 68899999874 67889999988776
|
This model represents an enzyme family in which members are designated either butryate kinase or branched-chain carboxylic acid kinase. The EC designation 2.7.2.7 describes an enzyme with relatively broad specificity; gene products whose context suggests a role in metabolism of aliphatic amino acids are likely to act as branched-chain carboxylic acid kinase. The gene typically found adjacent, ptb (phosphate butyryltransferase), likewise encodes an enzyme that may have a broad specificity that includes a role in aliphatic amino acid cabolism. |
| >PRK03011 butyrate kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.3e-07 Score=95.37 Aligned_cols=283 Identities=14% Similarity=0.173 Sum_probs=158.6
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCC-Cccc-CCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPP-HLMT-GSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~-~~~~-~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG 173 (465)
+.|+|+-|.|..|+++.+-.. .+..+. ...+. ++.. .+.-+=++|=.+.|.+++++++... .+...+|
T Consensus 3 ~il~inpgststk~a~~~~~~---~~~~~~---~~h~~~~~~~~~~~~~q~~~r~~~i~~~l~~~g~~~----~~l~av~ 72 (358)
T PRK03011 3 RILVINPGSTSTKIAVFEDEK---PIFEET---LRHSAEELEKFKTIIDQYEFRKQAILDFLKEHGIDL----SELDAVV 72 (358)
T ss_pred EEEEEcCCCchheEEEEcCCc---eeeeec---cccCHHHHhcCCCccchHHHHHHHHHHHHHHcCCCh----hcceEEE
Confidence 579999999999999995322 233221 22221 1111 2233456777788888888876432 2233332
Q ss_pred eeeeccccc--cc---CCceEEeccCCccccCCCCCCcHHHHHHHHHHH-cCCCeeEEEEEec-----------------
Q 012386 174 FTFSFPVRQ--TS---IASGDLIKWTKGFSIEDTVGEDVVGELTKAMER-IGLDMRVAALVND----------------- 230 (465)
Q Consensus 174 ~tfSfPv~q--~~---i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~-~gl~v~v~alvND----------------- 230 (465)
. =.+.++. .+ ++...+-.-.+.- +...=.++..++...+.+ .++|+ +++|+
T Consensus 73 ~-RgG~~~~v~gG~~~v~~~~~~~l~~~~--~~~~~~nl~~~~a~~~~~~~~~p~---~v~D~~~~~~~~~~a~~~~lp~ 146 (358)
T PRK03011 73 G-RGGLLKPIPGGTYRVNEAMLEDLKNGK--YGEHASNLGAIIAYEIAKELGIPA---FIVDPVVVDEMEPVARISGLPE 146 (358)
T ss_pred E-cCCCCcccCCCCEEcCHHHHHHHHhcC--CCCCCCCHHHHHHHHHHHhcCCCE---EEECCcccccCCHHHHHcCCCC
Confidence 2 2222221 00 1111110000000 001112344444444433 47784 78888
Q ss_pred ---------hHHHhhcccc-----c--CCceEEEEEEccccceeEEccCCCCcccCCCCC-------CCCce----eeee
Q 012386 231 ---------TIGTLAGGRY-----H--NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLP-------KSGEM----IFEK 283 (465)
Q Consensus 231 ---------tvatlla~~y-----~--~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~-------~~g~~----~fEk 283 (465)
.+--+++++| . +..+.|.+.+|||+++|.+.+++.+.+..+.-. ..|.+ ..+.
T Consensus 147 i~R~~gfHgln~~~va~~~a~~~g~~~~~~n~I~~hLGtGig~gai~~Gk~idgs~g~agEG~~~~~R~G~l~~~~~~~~ 226 (358)
T PRK03011 147 IERKSIFHALNQKAVARRVAKELGKKYEELNLIVAHLGGGISVGAHRKGRVIDVNNALDGEGPFSPERAGGLPVGDLVEL 226 (358)
T ss_pred cceeecchHHhHHHHHHHHHHHhCCCcccCcEEEEEeCCCceeeEEECCEEEecCCccCCCCCcccCcccCcCcHHHHHH
Confidence 5555666655 1 345899999999999999999988876554210 12222 1122
Q ss_pred hhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHH
Q 012386 284 IISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVV 363 (465)
Q Consensus 284 m~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~ 363 (465)
..+|.|=. ..+...+.+.+.+.+ + . . +.| .+++++. ++.++
T Consensus 227 ~~~g~~s~---~~l~~~l~~~~Gl~~----------~---------~--g-s~d---~reV~~~-----------a~~GD 267 (358)
T PRK03011 227 CFSGKYTK---EELKKKLVGKGGLVA----------Y---------L--G-TND---AREVEKR-----------IEEGD 267 (358)
T ss_pred HhcCCCCH---HHHHHHHHhccCccc----------c---------c--C-CCC---HHHHHHH-----------HHCCC
Confidence 23333311 111111111211111 0 0 0 012 2233332 45677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--CCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe
Q 012386 364 ELCDIVATRGARLSAAGIVGILKKL--GRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS 441 (465)
Q Consensus 364 ~ia~~V~~RaA~l~aagiaaii~~~--~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a 441 (465)
+.|+.++++.++.+|-+|++++..+ +| + .|+++||+.+ .+.|++.+++.++.+ ..+.+.++
T Consensus 268 ~~A~~ald~~~~~lak~I~~l~~~L~gdp--------D--~IVlgGGI~~-~~~l~~~I~~~l~~~------~pv~i~p~ 330 (358)
T PRK03011 268 EKAKLVYEAMAYQIAKEIGAMAAVLKGKV--------D--AIVLTGGLAY-SKRLVERIKERVSFI------APVIVYPG 330 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCC--------C--EEEEeCcccc-CHHHHHHHHHHHHhh------CCeEEEeC
Confidence 8899999999999999999999999 45 4 6889999998 889999999998865 25788888
Q ss_pred CC---hhHHHHH
Q 012386 442 ND---GSGIGAA 450 (465)
Q Consensus 442 ~D---gs~iGAA 450 (465)
++ +...||+
T Consensus 331 ~~e~~A~a~GA~ 342 (358)
T PRK03011 331 EDEMEALAEGAL 342 (358)
T ss_pred CCHHHHHHHHHH
Confidence 44 4555554
|
|
| >smart00732 YqgFc Likely ribonuclease with RNase H fold | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.3e-08 Score=84.67 Aligned_cols=98 Identities=16% Similarity=0.206 Sum_probs=66.3
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
.+||||+|||++++++++.+|+ +.... + ++.. .+.+++++.+.+.+.++ . ...+|++
T Consensus 2 ~ilgiD~Ggt~i~~a~~d~~g~---~~~~~--~--~~~~---~~~~~~~~~l~~~i~~~----~---------~~~i~Ig 58 (99)
T smart00732 2 RVLGLDPGRKGIGVAVVDETGK---LADPL--E--VIPR---TNKEADAARLKKLIKKY----Q---------PDLIVIG 58 (99)
T ss_pred cEEEEccCCCeEEEEEECCCCC---EecCE--E--EEEe---cCcchHHHHHHHHHHHh----C---------CCEEEEe
Confidence 4899999999999999987774 55322 2 2221 13456666666655542 1 4578999
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhc
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAG 237 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla 237 (465)
+|+|++... ...| . .++.+.|++.+ ++|| .++||+++|..+
T Consensus 59 ~pg~v~g~~-----~~~~---------~-~~l~~~l~~~~---~~pv---~~~nDa~st~~a 99 (99)
T smart00732 59 LPLNMNGTA-----SRET---------E-EAFAELLKERF---NLPV---VLVDERLATVYA 99 (99)
T ss_pred CCcCCCCCc-----CHHH---------H-HHHHHHHHHhh---CCcE---EEEeCCcccccC
Confidence 999884221 1124 2 67888888877 8996 999999988653
|
YqgF proteins are likely to function as an alternative to RuvC in most bacteria, and could be the principal holliday junction resolvases in low-GC Gram-positive bacteria. In Spt6p orthologues, the catalytic residues are substituted indicating that they lack enzymatic functions. |
| >COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.5e-06 Score=84.30 Aligned_cols=273 Identities=18% Similarity=0.154 Sum_probs=159.7
Q ss_pred ceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceee
Q 012386 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (465)
Q Consensus 94 ~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG 173 (465)
.-+||+||=|||..|+.+-+.+|+ ++-+. ..=|.+..+.+.++-+..|.+.|.+.+++.+.++ ..++
T Consensus 4 ~~~~lGVDGGGTkt~a~l~~~~g~---vlg~g---~sGpAN~~~~~~e~A~~ni~~ai~~A~~~aG~~~-------~~i~ 70 (301)
T COG2971 4 MPYFLGVDGGGTKTRAVLADEDGN---VLGRG---KSGPANIQLVGKEEAVRNIKDAIREALDEAGLKP-------DEIA 70 (301)
T ss_pred ccEEEEEccCCcceEEEEEcCCCc---EEEEe---ccCCceecccchHHHHHHHHHHHHHHHHhcCCCH-------HHhC
Confidence 348999999999999999887774 66543 2447776655558899999999999998776432 2222
Q ss_pred eeeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCee-EEEEEechHHHhhcccccCCceEEEEEEc
Q 012386 174 FTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMR-VAALVNDTIGTLAGGRYHNKDAIAAVILG 252 (465)
Q Consensus 174 ~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~-v~alvNDtvatlla~~y~~~~~~iglIlG 252 (465)
+++.+--- .|.+..... +.+ .+.+|.- -+.|+||+..+|.++...+. =+-+|.|
T Consensus 71 ~~~agla~---------------------ag~~~~~~~-~~~-~~~l~~a~~v~v~~Dg~iAl~ga~~~~~--Gii~i~G 125 (301)
T COG2971 71 AIVAGLAL---------------------AGANVEEAR-EEL-ERLLPFAGKVDVENDGLIALRGALGDDD--GIIVIAG 125 (301)
T ss_pred ceeeeeec---------------------cCcchhHHH-HHH-HHhcCccceEEEecChHHHHhhccCCCC--CEEEEec
Confidence 22221100 011111111 111 2245554 56899999999998755433 2456777
Q ss_pred cccceeEEc-cCC---CCcccCCCCCCCCceeeeehhccccHHH-HHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhh
Q 012386 253 TGTNAAYVE-RAH---AIPKWHGLLPKSGEMIFEKIISGMYLGE-IVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHM 327 (465)
Q Consensus 253 TG~Na~yie-~~~---~i~k~~~~~~~~g~~~fEkm~SG~YLGE-i~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~l 327 (465)
||+ +|+- +.. .+-+|...+- --.||.+||. .++.+++.+ .+..+. -.|....+
T Consensus 126 TGS--i~~~~~gg~~~r~GG~Gf~Ig--------DegSga~ig~~~L~~~lra~-------DG~~~~-----t~L~d~v~ 183 (301)
T COG2971 126 TGS--IGYGRKGGRRERVGGWGFPIG--------DEGSGAWIGREALQEALRAF-------DGRREA-----TPLTDAVM 183 (301)
T ss_pred CCe--EEEEEeCCeeEEecCcCcccc--------ccchHHHHHHHHHHHHHHHh-------cCCccC-----ChHHHHHH
Confidence 774 4432 222 3345544332 4468999974 334444332 222111 12444444
Q ss_pred hhcccCCCcCHHHHHHHHhh-hhcc---CCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCce
Q 012386 328 SAMHHDTSPDLRVVGKKLKD-ILEI---SNTS---LKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQK 400 (465)
Q Consensus 328 s~i~~d~s~~~~~~~~il~~-~~~~---~~~~---~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~ 400 (465)
..+.. |.+++...... ..+. ...+ .+.++.+|.++..|.++|+.+++..+-++. +... .
T Consensus 184 ~~f~~----d~edlv~~~y~a~~~~~~ia~lap~V~~~A~~GD~~A~~Il~~aa~~i~~~~~~l~-~~~g---------~ 249 (301)
T COG2971 184 AEFNL----DPEDLVAFIYKAGPGDKKIAALAPAVFEAARKGDPVAIRILKEAAAYIATLLEALS-IFNG---------S 249 (301)
T ss_pred HHhCC----CHHHHHHHHHhcCCchHHHHHhhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHh-cccC---------C
Confidence 44422 22233222221 1110 0011 156889999999999999988887777664 2222 1
Q ss_pred EEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHH
Q 012386 401 SVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLA 453 (465)
Q Consensus 401 ~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~A 453 (465)
..+.+-||++..++.|...+++.+ ..+ . .+--..||.++|
T Consensus 250 ~~l~l~GG~~~~~~~~~~~~~~~l---~~~-----~-----~~D~~~GA~~~A 289 (301)
T COG2971 250 EKLSLLGGLAPSYPYYLSLFRRAL---LVP-----P-----IGDALSGAVLLA 289 (301)
T ss_pred ceEEEeccccccchhhHHHHHHHh---cCC-----c-----cccHHHHHHHHH
Confidence 257899999999999999998864 211 1 344467877776
|
|
| >COG0837 Glk Glucokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.22 E-value=0.00021 Score=70.57 Aligned_cols=267 Identities=18% Similarity=0.211 Sum_probs=142.2
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
..|.=|+||||.|+++|..... +..+. +.|.. .+ |.-+.+.|++|+.++.. ..+...-|.
T Consensus 7 p~LvgDIGGTnaRfaLv~~a~~--~~~~~--~~~~~------~d----ypsle~av~~yl~~~~~------~~~~~a~~A 66 (320)
T COG0837 7 PRLVGDIGGTNARFALVEIAPA--EPLQA--ETYAC------AD----YPSLEEAVQDYLSEHTA------VAPRSACFA 66 (320)
T ss_pred ceEEEecCCcceEEEEeccCCC--Ccccc--ceecc------cC----cCCHHHHHHHHHHHhhc------cCccceEEE
Confidence 4566699999999999987543 12111 11111 11 33456667777776622 235668888
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccC-------------
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN------------- 242 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~------------- 242 (465)
.-+|+.-..+ .=++.+|. .+. +.|++.| |++- +.|+||=.|..++-...+
T Consensus 67 iAgPv~gd~v-~lTN~~W~----------~s~-~~~r~~L---gl~~--v~liNDF~A~A~Ai~~l~~~dl~qigg~~~~ 129 (320)
T COG0837 67 IAGPIDGDEV-RLTNHDWV----------FSI-ARMRAEL---GLDH--LSLINDFAAQALAIPRLGAEDLEQIGGGKPE 129 (320)
T ss_pred EecCccCCEE-eeecCccc----------ccH-HHHHHhc---CCCc--EEEechHHHHHhhccccCHHHHHHhcCCCCC
Confidence 9999864322 22333776 333 3444555 7753 599999999888876531
Q ss_pred CceEEEEEE--ccccceeEEccCCC----CcccCCCC--C---------------CCCceeeeehhccccHHHHHHHHHH
Q 012386 243 KDAIAAVIL--GTGTNAAYVERAHA----IPKWHGLL--P---------------KSGEMIFEKIISGMYLGEIVRRVLC 299 (465)
Q Consensus 243 ~~~~iglIl--GTG~Na~yie~~~~----i~k~~~~~--~---------------~~g~~~fEkm~SG~YLGEi~R~~l~ 299 (465)
++.- =.|+ |||.+.|+..+... +|+=.+.+ + ..|++.-|+.+||+.|-.|-|-...
T Consensus 130 ~~a~-~avlGPGTGLGVa~Lv~~~~~w~~lp~EGGHvdf~P~~~~E~~i~~~l~~~~GrVS~Er~LSG~GL~~iY~al~~ 208 (320)
T COG0837 130 PNAP-RAVLGPGTGLGVAGLVPNGGGWIPLPGEGGHVDFAPRSEREFQILEYLRARFGRVSAERVLSGPGLVNLYRALCA 208 (320)
T ss_pred CCCc-eEEEcCCCCcceEEEEecCCeeEeccCCCccccCCCCCHHHHHHHHHHHHhcCccchhhhcccccHHHHHHHHHH
Confidence 1222 2344 56667777765432 11111211 1 1244588999999999665544332
Q ss_pred HHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 012386 300 RMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAA 379 (465)
Q Consensus 300 ~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aa 379 (465)
.. +..|. .++...++.. .++ -.+..|+..++...-++++
T Consensus 209 ~~--------~~~~~------~~~p~~It~~-------------al~--------------g~d~~a~~tl~lF~~~lG~ 247 (320)
T COG0837 209 AD--------GRLPE------DLTPAAITER-------------ALA--------------GGDALARETLSLFCAILGR 247 (320)
T ss_pred hh--------CCCcc------cCCHHHHHHH-------------Hhc--------------CCCHHHHHHHHHHHHHHHh
Confidence 21 11121 1111222211 111 1234455555555555555
Q ss_pred HHHHHHHHhCCCCcCCCCCceEEEEEecceeccch------hHHHHHHHHH--HHHhccCCCccEEEEEeCChhHHHHHH
Q 012386 380 GIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYT------KFSACMQSTV--KELLGEEVSETVVIEHSNDGSGIGAAL 451 (465)
Q Consensus 380 giaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~------~f~~~l~~~l--~~~~~~~~~~~v~l~~a~Dgs~iGAAl 451 (465)
---.+.-.+... . -|=+.||+..+.- .|+++.+++= +.++. .-.|.+....--+++|||.
T Consensus 248 ~AGdlAL~lgar-------G--GVyiaGGI~pril~~l~~s~Fr~~FedKGr~sa~l~---~IPV~vi~~~~~gL~Gaa~ 315 (320)
T COG0837 248 VAGDLALTLGAR-------G--GVYIAGGIVPRILEALKASGFRARFEDKGRMSAYLA---DIPVYVILHPQPGLLGAAA 315 (320)
T ss_pred hHHhHHHHhhcc-------C--cEEEcCCchHhHHHHHhcchHHHHhhhcCchHHHHh---hCCEEEEecCCchHHHHHH
Confidence 555555566552 1 3446788754332 2333332211 11111 1357777788999999987
Q ss_pred HH
Q 012386 452 LA 453 (465)
Q Consensus 452 ~A 453 (465)
.+
T Consensus 316 ~~ 317 (320)
T COG0837 316 AL 317 (320)
T ss_pred Hh
Confidence 75
|
|
| >PRK00976 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=0.00012 Score=73.77 Aligned_cols=79 Identities=23% Similarity=0.218 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEE
Q 012386 359 RKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVI 438 (465)
Q Consensus 359 ~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l 438 (465)
++.++..|+.++++.++.+|.+|++++..++| + .|+++||+.+..+. .+.+.+++.+.+ . .-
T Consensus 233 A~~GD~~A~~aid~~~~~LA~~IAnLi~llDP--------e--~IVLGGGVS~~~e~---~L~~~I~e~l~~----~-~a 294 (326)
T PRK00976 233 YEKGDEKAKLAIDTLALFVAMEIASLLLLNPE--------D--NVVLAGSVGEMDEP---DVSERIKELLDK----K-VL 294 (326)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC--------C--EEEEcCccccCchh---HHHHHHHHHhcc----c-cc
Confidence 56678889999999999999999999999998 4 68999999976533 455566555533 1 34
Q ss_pred EEeCChhHHHHHHHHHH
Q 012386 439 EHSNDGSGIGAALLAAS 455 (465)
Q Consensus 439 ~~a~Dgs~iGAAl~Aa~ 455 (465)
.+.+|++.+|||++|.-
T Consensus 295 ~LG~dAGaiGAA~iA~~ 311 (326)
T PRK00976 295 VLGKESAAIGLALIARD 311 (326)
T ss_pred ccCCchHHHHHHHHHHH
Confidence 55689999999998854
|
|
| >PRK13318 pantothenate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=97.67 E-value=6.7e-05 Score=73.83 Aligned_cols=131 Identities=21% Similarity=0.189 Sum_probs=70.6
Q ss_pred EEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeee
Q 012386 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTF 176 (465)
Q Consensus 97 ~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tf 176 (465)
+|+||+|||++|+++++ ++ +++.+ +.+|.... .+.++++++ +.++++..+... .+...+|+++
T Consensus 2 iL~IDIGnT~iK~al~d-~g---~i~~~----~~~~t~~~-~~~~~~~~~----l~~l~~~~~~~~----~~i~~I~iss 64 (258)
T PRK13318 2 LLAIDVGNTNTVFGLYE-GG---KLVAH----WRISTDSR-RTADEYGVW----LKQLLGLSGLDP----EDITGIIISS 64 (258)
T ss_pred EEEEEECCCcEEEEEEE-CC---EEEEE----EEEeCCCC-CCHHHHHHH----HHHHHHHcCCCc----ccCceEEEEE
Confidence 78999999999999998 44 35532 34444332 244555544 455555443211 1244555555
Q ss_pred ecccccccCCceEEec-cCCccccCCCCCCc-HHHHHHHHHHHcCCCeeEEEEEec--------hHHHhhcccccCCceE
Q 012386 177 SFPVRQTSIASGDLIK-WTKGFSIEDTVGED-VVGELTKAMERIGLDMRVAALVND--------TIGTLAGGRYHNKDAI 246 (465)
Q Consensus 177 SfPv~q~~i~~g~Li~-wtKgF~~~~~~g~d-v~~~L~~al~~~gl~v~v~alvND--------tvatlla~~y~~~~~~ 246 (465)
=-|-....+ ...+.. |. ..+ +....+..+ ++++ .+.|| ..+..+.+.|.+ ..
T Consensus 65 Vvp~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~---gl~~---~y~np~~lG~DR~a~~~aa~~~~~~--~~ 126 (258)
T PRK13318 65 VVPSVMHSL-ERMCRKYFN---------IEPLVVVGPGVKT---GINI---KVDNPKEVGADRIVNAVAAYELYGG--PL 126 (258)
T ss_pred ecCchHHHH-HHHHHHHhC---------CCCeEEECCCcCC---CCce---ecCChhhcchHHHHHHHHHHHHcCC--CE
Confidence 223211011 011111 21 111 112222222 5664 78888 566666666644 67
Q ss_pred EEEEEccccceeEEcc
Q 012386 247 AAVILGTGTNAAYVER 262 (465)
Q Consensus 247 iglIlGTG~Na~yie~ 262 (465)
+-+-+||++...++..
T Consensus 127 ivid~GTA~t~d~v~~ 142 (258)
T PRK13318 127 IVVDFGTATTFDVVSA 142 (258)
T ss_pred EEEEcCCceEEEEEcC
Confidence 8999999999999944
|
|
| >PF00370 FGGY_N: FGGY family of carbohydrate kinases, N-terminal domain; InterPro: IPR018484 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.001 Score=64.60 Aligned_cols=92 Identities=14% Similarity=0.262 Sum_probs=57.4
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCC---cccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCccee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPH---LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~---~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (465)
+||+||+|.||+|+++++.+|+ ++...+..++.... ....+++++++.+.+++++.+++.+... .++..|
T Consensus 1 y~lgiDiGTts~K~~l~d~~g~---iv~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~----~~I~aI 73 (245)
T PF00370_consen 1 YYLGIDIGTTSVKAVLFDEDGK---IVASASRPYPYYTPEPGWAEQDPDEIWEAICEALKELLSQAGIDP----EQIKAI 73 (245)
T ss_dssp EEEEEEECSSEEEEEEEETTSC---EEEEEEEEETEBCSSTTEEEE-HHHHHHHHHHHHHHHHHHCTSCG----GGEEEE
T ss_pred CEEEEEEcccceEEEEEeCCCC---EEEEEEEeeeeccccccccccChHHHHHHHHHHHHHHHhhcCccc----ceeEEE
Confidence 6899999999999999997774 66655444433221 1123688999999999999998764321 345556
Q ss_pred eeeeec----ccccccCCceEEeccC
Q 012386 173 GFTFSF----PVRQTSIASGDLIKWT 194 (465)
Q Consensus 173 G~tfSf----Pv~q~~i~~g~Li~wt 194 (465)
||+--. |+++.+-.-.+.+.|.
T Consensus 74 ~is~~~~~~v~~D~~~~pl~~~i~w~ 99 (245)
T PF00370_consen 74 GISGQGHGLVLLDKDGKPLRPAILWM 99 (245)
T ss_dssp EEEE-SSEEEEEETTSSBSSCEE-TT
T ss_pred EeccccCCcceecccccccccccccc
Confidence 555422 3444431122344565
|
These enzymes include L-fucolokinase (2.7.1.51 from EC) (gene fucK); gluconokinase (2.7.1.12 from EC) (gene gntK); glycerol kinase (2.7.1.30 from EC) (gene glpK); xylulokinase (2.7.1.17 from EC) (gene xylB); and L-xylulose kinase (2.7.1.53 from EC) (gene lyxK). These enzymes are proteins of from 480 to 520 amino acid residues. This entry represents the N-terminal domain of these proteins. It adopts a ribonuclease H-like fold and is structurally related to the C-terminal domain [, ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 3G25_D 3GE1_D 2NLX_A 2ITM_A 2ZF5_Y 3L0Q_B 3GG4_B 3I8B_A 3H3O_C 3FLC_X .... |
| >TIGR01312 XylB D-xylulose kinase | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00051 Score=73.38 Aligned_cols=90 Identities=18% Similarity=0.291 Sum_probs=60.4
Q ss_pred EEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--C-CCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeee
Q 012386 98 YALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--P-PHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (465)
Q Consensus 98 LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~ 174 (465)
||||+|.|++|+++++++|+ ++.+.+..++. | +.....+.+++++.+++++++++++.+... .++..||+
T Consensus 1 lgIDiGtt~ik~~l~d~~g~---i~~~~~~~~~~~~~~~g~~e~d~~~~~~~l~~~i~~~~~~~~~~~----~~I~gIgv 73 (481)
T TIGR01312 1 LGIDLGTSGVKALLVDEQGE---VIASGSAPHTVISPHPGWSEQDPEDWWDATEEAIKELLEQASEMG----QDIKGIGI 73 (481)
T ss_pred CceeecCcceEEEEECCCCC---EEEEEeecccccCCCCCCeeeCHHHHHHHHHHHHHHHHHhcCCCc----ccEEEEEE
Confidence 58999999999999999885 66555333331 1 111124578899999999999998765422 45778888
Q ss_pred e--eeccc--ccccCCceEEeccC
Q 012386 175 T--FSFPV--RQTSIASGDLIKWT 194 (465)
Q Consensus 175 t--fSfPv--~q~~i~~g~Li~wt 194 (465)
+ .+.++ +.++---.+.+.|.
T Consensus 74 s~~~~g~v~~d~~g~~l~~~i~W~ 97 (481)
T TIGR01312 74 SGQMHGLVLLDANGEVLRPAILWN 97 (481)
T ss_pred ecCCceeEEECCCcCCCccchhhh
Confidence 8 77877 65432222223486
|
D-xylulose kinase (XylB) generally is found with xylose isomerase (XylA) and acts in xylose utilization. |
| >TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.015 Score=56.72 Aligned_cols=49 Identities=16% Similarity=0.375 Sum_probs=33.2
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhC
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEG 159 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~ 159 (465)
+++|||+|.|++|+++++ +| +++...+ .++ +..++-.++.+.+.+++.+
T Consensus 1 ~~lGIDiGtts~K~vl~d-~g---~il~~~~----~~~-------~~~~~~~~~~l~~~~~~~~ 49 (248)
T TIGR00241 1 ISLGIDSGSTTTKMVLME-DG---KVIGYKW----LDT-------TPVIEETARAILEALKEAG 49 (248)
T ss_pred CEEEEEcChhheEEEEEc-CC---EEEEEEE----ecC-------CCCHHHHHHHHHHHHHHcC
Confidence 478999999999999997 55 3664432 122 2245666777777776544
|
This domain may be involved in generating or regenerating the active sites of enzymes related to (R)-2-hydroxyglutaryl-CoA dehydratase and benzoyl-CoA reductase. |
| >TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.15 Score=53.17 Aligned_cols=24 Identities=21% Similarity=0.412 Sum_probs=20.9
Q ss_pred CCCcceeEEEEEeCCceEEEEEEE
Q 012386 90 TGDEKGLFYALDLGGTNFRVLRVQ 113 (465)
Q Consensus 90 ~G~E~G~~LaiDlGGTNlRv~~V~ 113 (465)
.+..+|.|+|||+|+|+.++.+++
T Consensus 139 ~~~~~g~~lGIDiGSTttK~Vl~d 162 (404)
T TIGR03286 139 RERQEGLTLGIDSGSTTTKAVVME 162 (404)
T ss_pred hhccCCEEEEEEcChhheeeEEEc
Confidence 356678999999999999999986
|
Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase. |
| >PRK13321 pantothenate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0032 Score=61.94 Aligned_cols=138 Identities=20% Similarity=0.216 Sum_probs=68.2
Q ss_pred EEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeee
Q 012386 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTF 176 (465)
Q Consensus 97 ~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tf 176 (465)
+|+||+|||++|+++++ ++ ++... +.+|+... .+.+++++.+.+. +++.+... .+...++++.
T Consensus 2 iL~IDIGnT~ik~gl~~-~~---~i~~~----~~~~T~~~-~~~~~~~~~l~~l----~~~~~~~~----~~i~~i~vss 64 (256)
T PRK13321 2 LLLIDVGNTNIKLGVFD-GD---RLLRS----FRLPTDKS-RTSDELGILLLSL----FRHAGLDP----EDIRAVVISS 64 (256)
T ss_pred EEEEEECCCeEEEEEEE-CC---EEEEE----EEEecCCC-CCHHHHHHHHHHH----HHHcCCCh----hhCCeEEEEe
Confidence 68999999999999998 33 24432 34554432 2455666555554 44332211 2345566665
Q ss_pred ecccccccCCceEEeccCCc-cccCC-CCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhh--cccccCCceEEEEEEc
Q 012386 177 SFPVRQTSIASGDLIKWTKG-FSIED-TVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLA--GGRYHNKDAIAAVILG 252 (465)
Q Consensus 177 SfPv~q~~i~~g~Li~wtKg-F~~~~-~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatll--a~~y~~~~~~iglIlG 252 (465)
--|-. ...+..+.+. |+++. +.+.+...-++..+ ..| ..|-||-.+.++ .+.|.+ +..+-+-+|
T Consensus 65 Vvp~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~y---~~P---~~lG~DR~a~~~aa~~~~~~-~~~lvid~G 132 (256)
T PRK13321 65 VVPPL-----NYSLESACKRYFGIKPLFVGPGIKTGLKIRY---DNP---REVGADRIVNAVAARRLYPD-RNLIVVDFG 132 (256)
T ss_pred ecccH-----HHHHHHHHHHHhCCCeEEECCCCCCCccccc---CCh---hhccHHHHHHHHHHHHHcCC-CCEEEEECC
Confidence 32311 1111111111 11211 11222212222222 233 368999444444 444533 256777888
Q ss_pred cccceeEEccC
Q 012386 253 TGTNAAYVERA 263 (465)
Q Consensus 253 TG~Na~yie~~ 263 (465)
|=+.--++.+.
T Consensus 133 TA~T~d~v~~~ 143 (256)
T PRK13321 133 TATTFDCVSGK 143 (256)
T ss_pred CceEEEEEcCC
Confidence 88777777543
|
|
| >TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0069 Score=65.99 Aligned_cols=73 Identities=16% Similarity=0.281 Sum_probs=51.7
Q ss_pred EEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--CC-CcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceee
Q 012386 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (465)
Q Consensus 97 ~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG 173 (465)
+||||+|+|++|+++++.+|+ ++.+.+..+++ |. .....+++++++-+.+++++.+++.+... .++..||
T Consensus 2 ~lgID~GTts~Ka~l~d~~G~---i~~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~~----~~I~~Ig 74 (541)
T TIGR01315 2 YIGVDVGTGSARACIIDSTGD---ILALAAQNIKTWTPSSGLEGQSSVYIWQAICNCVKQVLAESKVDP----NSVKGIG 74 (541)
T ss_pred EEEEEecCcCEEEEEEcCCCC---EEEEEEeeeeeccCCCCcccCCHHHHHHHHHHHHHHHHHHcCCCh----hheEEEE
Confidence 799999999999999998774 66555434442 22 12234688899999999999998754321 3456666
Q ss_pred eee
Q 012386 174 FTF 176 (465)
Q Consensus 174 ~tf 176 (465)
++.
T Consensus 75 is~ 77 (541)
T TIGR01315 75 FDA 77 (541)
T ss_pred ecc
Confidence 665
|
This model represents a subfamily of the FGGY family of carbohydrate kinases. This subfamily is closely related to a set of ribulose kinases, and many members are designated ribitol kinase. However, the member from Klebsiella pneumoniae, from a ribitol catabolism operon, accepts D-ribulose and to a lesser extent D-arabinitol and ribitol (PubMed:9639934 and JW Lengeler, personal communication); its annotation in GenBank as ribitol kinase is imprecise and may have affected public annotation of related proteins. |
| >TIGR01314 gntK_FGGY gluconate kinase, FGGY type | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0095 Score=64.27 Aligned_cols=73 Identities=12% Similarity=0.263 Sum_probs=49.4
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeee--cCCC-cccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCccee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVS--IPPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~--ip~~-~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (465)
++||||+|+|++|+++++.+|+ ++.+.+.+++ .|.. ....+.+++++.+.+++++.+++.... .++..|
T Consensus 1 ~~lgiDiGtt~~K~~l~d~~g~---i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~-----~~I~~I 72 (505)
T TIGR01314 1 YMIGVDIGTTSTKAVLFEENGK---IVAKSSIGYPLYTPASGMAEENPEEIFEAVLVTIREVSINLEDE-----DEILFV 72 (505)
T ss_pred CEEEEeccccceEEEEEcCCCC---EEEEEEeecccccCCCCCeeeCHHHHHHHHHHHHHHHHHhCCCc-----CceEEE
Confidence 4799999999999999998774 6665544344 2211 122357789999999999998764321 235555
Q ss_pred eeee
Q 012386 173 GFTF 176 (465)
Q Consensus 173 G~tf 176 (465)
|++-
T Consensus 73 gis~ 76 (505)
T TIGR01314 73 SFST 76 (505)
T ss_pred EEec
Confidence 5543
|
Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway. |
| >TIGR01311 glycerol_kin glycerol kinase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0083 Score=64.53 Aligned_cols=61 Identities=21% Similarity=0.371 Sum_probs=44.3
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--CCC-cccCCcchHHHHHHHHHHHHHHhhC
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEG 159 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~I~~fl~~~~ 159 (465)
++||||+|+|++|+++++.+|+ ++...+..++. |.. ....+.+++++.+.+++++.+++.+
T Consensus 2 ~~lgiDiGtt~iKa~l~d~~g~---~l~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~ 65 (493)
T TIGR01311 2 YILAIDQGTTSSRAIVFDKDGN---IVAIHQKEFTQIFPKPGWVEHDPMEIWESVLSCIAEALAKAG 65 (493)
T ss_pred eEEEEecCCCceEEEEECCCCC---EEEEEeeeccccCCCCCcEeeCHHHHHHHHHHHHHHHHHHcC
Confidence 5899999999999999998774 66554333322 211 1122577899999999999998765
|
This model describes glycerol kinase, a member of the FGGY family of carbohydrate kinases. |
| >PRK10939 autoinducer-2 (AI-2) kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.012 Score=63.70 Aligned_cols=73 Identities=16% Similarity=0.173 Sum_probs=50.4
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecC-----CCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcc
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIP-----PHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip-----~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~ 170 (465)
++||||+|.|++|+++++.+|+ ++...+..++.+ +.....+.+++++.+.+++++.+++.+.. ..++.
T Consensus 4 ~~lgID~GTts~Ka~l~d~~G~---~l~~~~~~~~~~~~~~~~g~~Eqd~~~~w~~~~~~l~~~~~~~~~~----~~~I~ 76 (520)
T PRK10939 4 YLMALDAGTGSIRAVIFDLNGN---QIAVGQAEWRHLAVPDVPGSMEFDLEKNWQLACQCIRQALQKAGIP----ASDIA 76 (520)
T ss_pred EEEEEecCCCceEEEEECCCCC---EEEEEeccccccCCCCCCCCeeECHHHHHHHHHHHHHHHHHHcCCC----ccceE
Confidence 6899999999999999998874 665554444322 11123367889999999999998765422 12355
Q ss_pred eeeee
Q 012386 171 ELGFT 175 (465)
Q Consensus 171 ~lG~t 175 (465)
.||++
T Consensus 77 aI~~s 81 (520)
T PRK10939 77 AVSAT 81 (520)
T ss_pred EEEEE
Confidence 55554
|
|
| >PRK00047 glpK glycerol kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.011 Score=63.67 Aligned_cols=61 Identities=23% Similarity=0.349 Sum_probs=44.9
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--CCC-cccCCcchHHHHHHHHHHHHHHhhC
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEG 159 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~I~~fl~~~~ 159 (465)
++||||+|+|++|+++++.+|+ ++...+..+++ |.. ....+.+++++-+.+++++.+++.+
T Consensus 6 ~~lgiD~GTts~Ka~l~d~~g~---~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~ 69 (498)
T PRK00047 6 YILALDQGTTSSRAIIFDHDGN---IVSVAQKEFTQIFPQPGWVEHDPNEIWASQLSVIAEALAKAG 69 (498)
T ss_pred EEEEEecCCCceEEEEECCCCC---EEEEEeeeccccCCCCCeEeeCHHHHHHHHHHHHHHHHHHcC
Confidence 6899999999999999998875 55554444432 221 1123678899999999999987654
|
|
| >TIGR01234 L-ribulokinase L-ribulokinase | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.012 Score=64.05 Aligned_cols=61 Identities=20% Similarity=0.252 Sum_probs=47.0
Q ss_pred eEEEEEeCCceEEEEEEE-ecCCcceeEEEEeeeeec-------C-------CCcccCCcchHHHHHHHHHHHHHHhhC
Q 012386 96 LFYALDLGGTNFRVLRVQ-LGGREGRVVKQEFEEVSI-------P-------PHLMTGSSHELFDYIAAALAKFVATEG 159 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~-l~g~~~~i~~~~~~~~~i-------p-------~~~~~~~~~~lfd~Ia~~I~~fl~~~~ 159 (465)
++||||+|.|+.|+++++ .+|+ ++...+..+++ | ......+++++++-+.+++++.+++.+
T Consensus 2 ~~lgiD~GTss~Ka~l~d~~~G~---~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~Eqdp~~~w~~~~~~~~~~~~~~~ 77 (536)
T TIGR01234 2 YAIGVDFGTLSGRALAVDVATGE---EIATAVEWYRHWVKGQFLPKTGAKLPNDQALQHPADYIEVLEAAIPTVLAELG 77 (536)
T ss_pred eEEEEecCCCceEEEEEECCCCc---EeeeeeeccccccccccCCCccccCCCCccccCHHHHHHHHHHHHHHHHHHcC
Confidence 589999999999999999 8885 66555555552 3 223344688999999999999998754
|
This enzyme catalyzes the second step in arabinose catabolism. The most closely related protein subfamily outside the scope of this model includes ribitol kinase from E. coli. |
| >PRK15027 xylulokinase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.015 Score=62.44 Aligned_cols=71 Identities=18% Similarity=0.389 Sum_probs=51.3
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--C-CCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCccee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--P-PHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (465)
+|||||+|.|++|+++++.+|+ ++...+..+++ | +.....+.+++++.+.+++++.+++... +++..|
T Consensus 1 ~~lgID~GTts~Ka~l~d~~G~---vva~~~~~~~~~~~~~g~~eqd~~~~w~~~~~~~~~l~~~~~~------~~I~aI 71 (484)
T PRK15027 1 MYIGIDLGTSGVKVILLNEQGE---VVASQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSL------QDVKAL 71 (484)
T ss_pred CEEEEEecccceEEEEEcCCCC---EEEEEeecccccCCCCCccccCHHHHHHHHHHHHHHHHHhCCc------cceeEE
Confidence 4899999999999999998774 77666555543 2 1122345788999999999999876421 346667
Q ss_pred eee
Q 012386 173 GFT 175 (465)
Q Consensus 173 G~t 175 (465)
|++
T Consensus 72 ~is 74 (484)
T PRK15027 72 GIA 74 (484)
T ss_pred EEe
Confidence 764
|
|
| >PRK10331 L-fuculokinase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.023 Score=60.71 Aligned_cols=60 Identities=18% Similarity=0.222 Sum_probs=43.8
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec----CC-CcccCCcchHHHHHHHHHHHHHHhh
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI----PP-HLMTGSSHELFDYIAAALAKFVATE 158 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i----p~-~~~~~~~~~lfd~Ia~~I~~fl~~~ 158 (465)
++|+||+|.|+.|+++++.+|+ ++...+..++. |. .....+++++++.+.+++++.+++.
T Consensus 3 ~~lgID~GTt~~Ka~l~d~~G~---~~~~~~~~~~~~~~~~~~g~~eqd~~~~w~~~~~~~~~~~~~~ 67 (470)
T PRK10331 3 VILVLDCGATNVRAIAVDRQGK---IVARASTPNASDIAAENSDWHQWSLDAILQRFADCCRQINSEL 67 (470)
T ss_pred eEEEEecCCCceEEEEEcCCCc---EEEEEecccccccCCCCCCCcccCHHHHHHHHHHHHHHHHHhC
Confidence 6899999999999999998884 66555433331 11 1122367889999999999998753
|
|
| >PTZ00294 glycerol kinase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.034 Score=60.01 Aligned_cols=61 Identities=16% Similarity=0.230 Sum_probs=44.7
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--C-CCcccCCcchHHHHHHHHHHHHHHhhC
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--P-PHLMTGSSHELFDYIAAALAKFVATEG 159 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~I~~fl~~~~ 159 (465)
++|+||+|.|++|+++++.+|+ ++...+..+++ | +.....+.+++++-+.+++++.+++..
T Consensus 3 ~~lgiDiGTts~Ka~l~d~~G~---~v~~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~ 66 (504)
T PTZ00294 3 YIGSIDQGTTSTRFIIFDEKGN---VVSSHQIPHEQITPHPGWLEHDPEEILRNVYKCMNEAIKKLR 66 (504)
T ss_pred EEEEEecCCCceEEEEECCCCC---EEEEEEEeecccCCCCCeEeeCHHHHHHHHHHHHHHHHHHcC
Confidence 6899999999999999998774 66555444432 1 111223577899999999999987654
|
|
| >COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.03 Score=60.50 Aligned_cols=63 Identities=19% Similarity=0.270 Sum_probs=46.2
Q ss_pred eeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCC---cccCCcchHHHHHHHHHHHHHHhhC
Q 012386 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPH---LMTGSSHELFDYIAAALAKFVATEG 159 (465)
Q Consensus 95 G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~---~~~~~~~~lfd~Ia~~I~~fl~~~~ 159 (465)
.+|||||+|.|+.|+.+++.++. .++......++.... ....+.+++++.+.++|++.+++..
T Consensus 4 ~~~lgIDiGTt~~Kavl~d~~~~--~~~~~~~~~~~~~~~~~g~~e~d~~~~w~~~~~ai~~l~~~~~ 69 (502)
T COG1070 4 KYVLGIDIGTTSVKAVLFDEDGG--EVVATARFENPVSTPQPGWAEQDPDELWQAILEALRQLLEESK 69 (502)
T ss_pred cEEEEEEcCCCcEEEEEEeCCCC--eEEEEeeccccccCCCCCCcccCHHHHHHHHHHHHHHHHHhcc
Confidence 37999999999999999999842 455554333332211 1235689999999999999998753
|
|
| >PRK13317 pantothenate kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=1.1 Score=44.56 Aligned_cols=49 Identities=22% Similarity=0.290 Sum_probs=29.3
Q ss_pred EEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHHH
Q 012386 402 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAA 454 (465)
Q Consensus 402 ~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~Aa 454 (465)
.|.+.||...++|.+++.+.+.++. .. .+-+......-.+-+|||+.+.
T Consensus 225 ~Ivf~G~gla~n~~l~~~l~~~l~~--~~--~~~~~p~~~~~~gAlGAaL~a~ 273 (277)
T PRK13317 225 NIVYIGSTLTNNPLLQEIIESYTKL--RN--CTPIFLENGGYSGAIGALLLAT 273 (277)
T ss_pred eEEEECcccccCHHHHHHHHHHHhc--CC--ceEEecCCCchhHHHHHHHHhh
Confidence 5778886666888888888776532 11 1112223344566778877653
|
|
| >PLN02295 glycerol kinase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.038 Score=59.77 Aligned_cols=62 Identities=19% Similarity=0.257 Sum_probs=45.9
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--CC-CcccCCcchHHHHHHHHHHHHHHhhCC
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGE 160 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~ 160 (465)
++||||+|.|++|+++++.+|+ ++...+..+++ |+ .....+++++++-+.++|++.+++.+.
T Consensus 1 ~vlgID~GTts~Ka~l~d~~G~---~~~~~~~~~~~~~~~~G~~Eqdp~~~w~~~~~~i~~~~~~~~~ 65 (512)
T PLN02295 1 FVGAIDQGTTSTRFIIYDRDAR---PVASHQVEFTQIYPQAGWVEHDPMEILESVLTCIAKALEKAAA 65 (512)
T ss_pred CEEEEecCCCceEEEEECCCCC---EEEEEeecccccCCCCCcEeeCHHHHHHHHHHHHHHHHHHcCC
Confidence 4799999999999999998885 66555444432 21 122346889999999999999987653
|
|
| >TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type | Back alignment and domain information |
|---|
Probab=95.54 E-value=1.9 Score=43.02 Aligned_cols=46 Identities=17% Similarity=0.266 Sum_probs=31.3
Q ss_pred EEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHH
Q 012386 402 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAAL 451 (465)
Q Consensus 402 ~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl 451 (465)
.|.+.||....+|..++.+.++++-+- .+-+.+++.+-.+.+|||+
T Consensus 233 ~IvF~Gg~L~~~~~l~~~~~~~~~~~~----~~~ifp~h~~y~gAlGAaL 278 (279)
T TIGR00555 233 RIVFIGSFLRNNQLLMKVLSYATNFWS----KKALFLEHEGYSGAIGALL 278 (279)
T ss_pred eEEEECCcccCCHHHHHHHHHHHhhcC----ceEEEECCcchHHHhhhcc
Confidence 588999998999999999999876431 1233344455555566654
|
This model describes a eukaryotic form of pantothenate kinase, characterized from the fungus Aspergillus nidulans and with similar forms known in several other eukaryotes. It also includes forms from several Gram-positive bacteria suggested to have originated from the eukaryotic form by lateral transfer. It differs in a number of biochemical properties (such as inhibition by acetyl-CoA) from most bacterial CoaA and lacks sequence similarity. This enzyme is the key regulatory step in the biosynthesis of coenzyme A (CoA). |
| >TIGR02628 fuculo_kin_coli L-fuculokinase | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.039 Score=58.95 Aligned_cols=59 Identities=15% Similarity=0.260 Sum_probs=43.2
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec----C-CCcccCCcchHHHHHHHHHHHHHHh
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI----P-PHLMTGSSHELFDYIAAALAKFVAT 157 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i----p-~~~~~~~~~~lfd~Ia~~I~~fl~~ 157 (465)
.+|+||+|.|+.|+++++.+|+ ++.+.+.+++. | +.....+.+++++.+.+++++.+.+
T Consensus 2 ~ilgiD~GTss~K~~l~d~~g~---~va~~~~~~~~~~~~~~~g~~eqd~~~~w~~~~~~~~~l~~~ 65 (465)
T TIGR02628 2 VILVLDCGATNLRAIAINRQGK---IVASASTPNATKQAIENNDYHIWDLEAIWQKLADCCQQINSE 65 (465)
T ss_pred eEEEEecCCCcEEEEEEcCCCC---EEEEEecccccCCCCCCCCceeeCHHHHHHHHHHHHHHHHhh
Confidence 4799999999999999998774 66555433331 1 1122335788999999999999864
|
Members of this family are L-fuculokinase, from the clade that includes the L-fuculokinase of Escherichia coli. This enzyme catalyzes the second step in fucose catabolism. This family belongs to FGGY family of carbohydrate kinases (pfam02782, pfam00370). It is encoded by the kinase (K) gene of the fucose (fuc) operon. |
| >PRK04123 ribulokinase; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.046 Score=59.63 Aligned_cols=61 Identities=20% Similarity=0.283 Sum_probs=44.0
Q ss_pred eEEEEEeCCceEEEEEEEe-cCCcceeEEEEeeeeec--------CCC-cccCCcchHHHHHHHHHHHHHHhhC
Q 012386 96 LFYALDLGGTNFRVLRVQL-GGREGRVVKQEFEEVSI--------PPH-LMTGSSHELFDYIAAALAKFVATEG 159 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l-~g~~~~i~~~~~~~~~i--------p~~-~~~~~~~~lfd~Ia~~I~~fl~~~~ 159 (465)
++||||+|.|+.|+++++. +|+ ++.+.+..++. |.. ....+++++++-+.+++++.+++.+
T Consensus 4 ~~lgiD~GTts~Ka~l~d~~~g~---~~~~~~~~~~~~~~~~~~~~~~g~~Eqdp~~~w~~~~~~i~~~~~~~~ 74 (548)
T PRK04123 4 YVIGLDFGTDSVRALLVDCATGE---ELATAVVEYPHWVKGRYLDLPPNQALQHPLDYIESLEAAIPAVLKEAG 74 (548)
T ss_pred EEEEEecCCCceEEEEEECCCCc---EeEEEEeeccccccccccCCCCCceeeCHHHHHHHHHHHHHHHHHHcC
Confidence 6899999999999999995 774 66555444442 211 1123467889999999999887654
|
|
| >TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit | Back alignment and domain information |
|---|
Probab=95.46 E-value=1 Score=45.14 Aligned_cols=70 Identities=21% Similarity=0.400 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEE-E
Q 012386 360 KLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVV-I 438 (465)
Q Consensus 360 ~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~-l 438 (465)
++..-+|..|.+|. +.++++.+.. + .|.+.||+. +++.+.+.+++.+ +. .+. +
T Consensus 217 dI~aGl~~sia~rv--------~~~~~~~~i~-------~--~v~~~GGva-~N~~l~~al~~~L----g~----~v~~~ 270 (293)
T TIGR03192 217 MVIAAYCQAMAERV--------VSLLERIGVE-------E--GFFITGGIA-KNPGVVKRIERIL----GI----KAVDT 270 (293)
T ss_pred HHHHHHHHHHHHHH--------HHHhcccCCC-------C--CEEEECccc-ccHHHHHHHHHHh----CC----CceeC
Confidence 46667899999983 3344454331 2 368899975 5777777776655 21 222 1
Q ss_pred -EEeCChhHHHHHHHHHH
Q 012386 439 -EHSNDGSGIGAALLAAS 455 (465)
Q Consensus 439 -~~a~Dgs~iGAAl~Aa~ 455 (465)
....-.+-+|||++|.-
T Consensus 271 p~~p~~~GAlGAAL~A~~ 288 (293)
T TIGR03192 271 KIDSQIAGALGAALFGYT 288 (293)
T ss_pred CCCccHHHHHHHHHHHHH
Confidence 12345678899998753
|
Members of this family are the Q subunit of one of two related types of four-subunit ATP-dependent benzoyl-CoA reductase. This enzyme system catalyzes the dearomatization of benzoyl-CoA, a common intermediate in pathways for the degradation for a number of different aromatic compounds, such as phenol and toluene. |
| >COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=94.06 E-value=3.9 Score=42.23 Aligned_cols=101 Identities=20% Similarity=0.264 Sum_probs=59.4
Q ss_pred CCcceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcc
Q 012386 91 GDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170 (465)
Q Consensus 91 G~E~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~ 170 (465)
....+.|||||.|-|+.++.+++.++ .+... |-.++. +.+. -.+.+.+.+++-+... .++.
T Consensus 131 ~~~~~~~LGID~GSTtTK~VLm~d~~---~I~~~----~~~~t~---g~p~-----~~~~l~~~le~l~~~~----~~I~ 191 (396)
T COG1924 131 EYQGMYTLGIDSGSTTTKAVLMEDGK---EILYG----FYVSTK---GRPI-----AEKALKEALEELGEKL----EEIL 191 (396)
T ss_pred hhcCcEEEEEecCCcceeEEEEeCCC---eEEEE----EEEcCC---CChh-----HHHHHHHHHHHcccCh----heee
Confidence 34456899999999999999987655 24432 222222 2222 2455566665544321 2344
Q ss_pred eeeeeeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCCceE
Q 012386 171 ELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAI 246 (465)
Q Consensus 171 ~lG~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~~~~ 246 (465)
.+|+| ..+ + .++..+| +.+ .++|-+++...+..|..|+..
T Consensus 192 ~~~~T----------------GYG----------R---~~v~~~~---~aD----~~~~Ei~ah~kgA~~f~p~~d 231 (396)
T COG1924 192 GLGVT----------------GYG----------R---NLVGAAL---GAD----KVVVEISAHAKGARYFAPDVD 231 (396)
T ss_pred eeeee----------------ccc----------H---HHhhhhh---cCC----cceeeeehhHHHHHHhCCCCc
Confidence 44443 222 2 3344555 566 678888888899888776655
|
|
| >PTZ00009 heat shock 70 kDa protein; Provisional | Back alignment and domain information |
|---|
Probab=93.80 E-value=4.1 Score=45.56 Aligned_cols=55 Identities=15% Similarity=0.220 Sum_probs=36.9
Q ss_pred CcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCceEEEEEEcccc-ceeEEc
Q 012386 205 EDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTGT-NAAYVE 261 (465)
Q Consensus 205 ~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIlGTG~-Na~yie 261 (465)
..=.+.+.+|.+.-|+++ +.|+|+.+|++++-.+. .+..++-+=+|-|+ ..+.+.
T Consensus 153 ~~qR~a~~~Aa~~AGl~v--~~li~EptAAAl~y~~~~~~~~~~~vlv~D~GggT~dvsv~~ 212 (653)
T PTZ00009 153 DSQRQATKDAGTIAGLNV--LRIINEPTAAAIAYGLDKKGDGEKNVLIFDLGGGTFDVSLLT 212 (653)
T ss_pred HHHHHHHHHHHHHcCCce--eEEecchHHHHHHHhhhccCCCCCEEEEEECCCCeEEEEEEE
Confidence 344667777777678875 79999999999986542 23455555677776 444443
|
|
| >KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.59 E-value=0.41 Score=51.38 Aligned_cols=95 Identities=18% Similarity=0.253 Sum_probs=61.9
Q ss_pred ceeEEEEEeCCceEEEEEEE-ecCCcceeEEEEeeeee--cC-CCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCc
Q 012386 94 KGLFYALDLGGTNFRVLRVQ-LGGREGRVVKQEFEEVS--IP-PHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ 169 (465)
Q Consensus 94 ~G~~LaiDlGGTNlRv~~V~-l~g~~~~i~~~~~~~~~--ip-~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~ 169 (465)
...+++||+|-|..|+++++ -+|+ .+....++++ -| ......+++++++-+.+||+...++.... ..
T Consensus 5 ~~~~~gIDvGTtSaR~~v~~~~~~e---~l~~~~~~i~~~~~~~~~~eq~p~eI~~~V~~ci~~~~e~l~~~------~~ 75 (516)
T KOG2517|consen 5 EPVVLGIDVGTTSARALVFNAKNGE---LLSLAQKEITQEFPKEGWVEQDPKEIWQAVCRCIEKACEKLGVL------NI 75 (516)
T ss_pred cceEEEEEcCCCceEEEEEecCCCc---cceeeeeeeeeecCCCCeEEeCHHHHHHHHHHHHHHHHHhhccc------cc
Confidence 45799999999999999998 4443 3322211111 11 12234579999999999999988765532 34
Q ss_pred ceeeeeeecccccccCCceEEeccCCccccCC
Q 012386 170 RELGFTFSFPVRQTSIASGDLIKWTKGFSIED 201 (465)
Q Consensus 170 ~~lG~tfSfPv~q~~i~~g~Li~wtKgF~~~~ 201 (465)
...|++.++-+.|. ...+-|.|.+.-+.
T Consensus 76 ~~~~~~~igv~~qr----~~~v~w~~~tg~p~ 103 (516)
T KOG2517|consen 76 KVVGATCIGVVNQR----EGSVLWNKRTGEPL 103 (516)
T ss_pred cccccEEEEEEecC----CceEEeecCCCCcc
Confidence 55668888888873 23345666554443
|
|
| >PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length | Back alignment and domain information |
|---|
Probab=93.51 E-value=5.4 Score=40.84 Aligned_cols=277 Identities=16% Similarity=0.222 Sum_probs=139.7
Q ss_pred EEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeec
Q 012386 99 ALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSF 178 (465)
Q Consensus 99 aiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSf 178 (465)
|||=|-+++.++.++..|+ ++. .++||.+.+...+..+.+.|.+ + ...+. -..|=|++-|+
T Consensus 1 GIDpGT~s~dv~~~dd~g~---v~~----~~~ipt~~v~~~p~~iv~~l~~----~---~~~dl-----Ia~psGyG~pl 61 (343)
T PF07318_consen 1 GIDPGTKSFDVCGLDDDGK---VIF----YFSIPTEEVAKNPSIIVEELEE----F---GDIDL-----IAGPSGYGLPL 61 (343)
T ss_pred CCCCCCCcEEEEEEccCCc---EEE----EeeccHHHhhhCHHHHHHHHHh----c---cCCCE-----EEeCCcCCccc
Confidence 5789999999999988663 553 3578988766556555544433 2 12111 12333444433
Q ss_pred ccccccCCceEEeccCCccccCC-CCCC---cHHHHHHHHHHHcCCCeeE-EEE------------------EechHHHh
Q 012386 179 PVRQTSIASGDLIKWTKGFSIED-TVGE---DVVGELTKAMERIGLDMRV-AAL------------------VNDTIGTL 235 (465)
Q Consensus 179 Pv~q~~i~~g~Li~wtKgF~~~~-~~g~---dv~~~L~~al~~~gl~v~v-~al------------------vNDtvatl 235 (465)
---+ .+.+..+.-+|. ..+ -+|. =+.+++.+ +++.++|+-. =.+ .-|-+++.
T Consensus 62 ~~~~-ei~d~e~~l~tl---~~~~~~g~~~~Glr~~~~~-l~~~~l~~~~iPgVi~LptVP~~RK~N~IDmGTaDKva~a 136 (343)
T PF07318_consen 62 KRIR-EITDREIFLLTL---IEESEVGRRIGGLRKLVRE-LAESNLPAYFIPGVIHLPTVPAWRKINRIDMGTADKVASA 136 (343)
T ss_pred cccc-ccchhhhhceEe---ecccccccccccHHHHHHH-HHhCCCCEEEeCceeccCCCchHhhhcccccCcHhHHHHH
Confidence 2211 122222222221 111 0111 14444433 3555666421 111 12666665
Q ss_pred hcccc---------cCCceEEEEEEccccceeE-EccCCCCcccCCCCCCCCceeeeehhccccHHHHHHHHHHH-Hhhc
Q 012386 236 AGGRY---------HNKDAIAAVILGTGTNAAY-VERAHAIPKWHGLLPKSGEMIFEKIISGMYLGEIVRRVLCR-MAEE 304 (465)
Q Consensus 236 la~~y---------~~~~~~iglIlGTG~Na~y-ie~~~~i~k~~~~~~~~g~~~fEkm~SG~YLGEi~R~~l~~-~~~~ 304 (465)
.-.-| .+..+.|-+=+|.|.|+.. +.+++.+-+..+.+-.+| ...+|.-=||+++++-.. -.+.
T Consensus 137 ~lai~~~~~~~gi~y~~~nfIlvEiG~~yta~iaV~~GkIVDGiggt~g~pG-----~~~~G~lD~Evay~i~~~~~~sK 211 (343)
T PF07318_consen 137 ALAIYDQAEREGIEYREVNFILVEIGSGYTAAIAVKNGKIVDGIGGTIGFPG-----YLSHGALDGEVAYLIGNYSRFSK 211 (343)
T ss_pred HHHHHhhHHhhCCCcccceEEEEEccCCceEEEEEECCeEEccccccccCCc-----cccCCcccHHHHHHhccccccch
Confidence 54222 2345889999999988666 566777777777653444 445555557877665311 1112
Q ss_pred ccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012386 305 ANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGI 384 (465)
Q Consensus 305 ~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaai 384 (465)
..+|.+.... +-... .. .+..++--+.-+++....++-.++++
T Consensus 212 ~~lF~gG~~~---------------i~~~~-----e~-----------------~~~~~e~~~~a~ea~~E~i~k~V~~l 254 (343)
T PF07318_consen 212 NDLFSGGAIK---------------IAGID-----EF-----------------AKRLKEDEKCAWEAMIESIVKAVASL 254 (343)
T ss_pred hhhhccCcee---------------eccch-----HH-----------------HHhhhcchhHHHHHHHHHHHHHHHHH
Confidence 2334322110 10000 01 11111111112333444455555555
Q ss_pred HHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEE----EeCChhHHHHHHHHHH
Q 012386 385 LKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIE----HSNDGSGIGAALLAAS 455 (465)
Q Consensus 385 i~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~----~a~Dgs~iGAAl~Aa~ 455 (465)
+...... + .|.+.|.+. ..|.|.+.+.+.+.++.+.. ...+. .+++ +..|||++|--
T Consensus 255 ~~~~~~~-------~--~IilSGr~~-~~~~~~~~l~~~l~~~~~~~---v~~l~~~~~~aKe-aA~GaAiIA~g 315 (343)
T PF07318_consen 255 LASVPDP-------D--EIILSGRFS-RIPEFRKKLEDRLEDYFPVK---VRKLEGLARKAKE-AAQGAAIIANG 315 (343)
T ss_pred hcccCCC-------C--EEEEecccc-ccHHHHHHHHHHHHhhcccc---eeecccccccchh-hhhhHHHHhhh
Confidence 5554221 2 478899987 68899999999998876521 11221 1244 67799999853
|
The function of this family is unknown. |
| >PLN02669 xylulokinase | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.33 Score=53.14 Aligned_cols=78 Identities=17% Similarity=0.210 Sum_probs=48.4
Q ss_pred cCCCCCcceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--CCCc----ccCCcc----------hHHHHHHHH
Q 012386 87 NLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPHL----MTGSSH----------ELFDYIAAA 150 (465)
Q Consensus 87 ~lP~G~E~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p~~~----~~~~~~----------~lfd~Ia~~ 150 (465)
+||.+ .+|||||+|.|++|+.+++.+|+ ++...+..+++ |..- ...+++ .+++-+..+
T Consensus 3 ~~~~~---~~~LGiD~GT~s~Ka~l~d~~g~---vv~~a~~~~~~~~~~~~~~~gve~dp~~~~~~~~~~~~w~~al~~~ 76 (556)
T PLN02669 3 SLPED---SLFLGFDSSTQSLKATVLDSNLR---IVASEIVHFDSDLPHYGTKDGVYRDPKVNGRIVSPTLMWVEALDLL 76 (556)
T ss_pred CCCCC---CeEEEEecccCCeEEEEEcCCCC---EEEEEEecCCcccCcCCCCCceEeCCcccCccCCCHHHHHHHHHHH
Confidence 46654 37999999999999999998885 66655444431 2111 011233 455888888
Q ss_pred HHHHHHhhCCCCCCCCCCcceeeee
Q 012386 151 LAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 151 I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
+++++ +.+.+. +++..||++
T Consensus 77 l~~l~-~~~~~~----~~I~aIs~s 96 (556)
T PLN02669 77 LQKLA-KEKFPF----HKVVAISGS 96 (556)
T ss_pred HHHHH-HcCCCh----hhEEEEEec
Confidence 88876 333221 345555555
|
|
| >PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins | Back alignment and domain information |
|---|
Probab=92.33 E-value=12 Score=40.98 Aligned_cols=55 Identities=24% Similarity=0.338 Sum_probs=35.7
Q ss_pred CcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccC---CceEEEEEEcccc-ceeEEc
Q 012386 205 EDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN---KDAIAAVILGTGT-NAAYVE 261 (465)
Q Consensus 205 ~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~---~~~~iglIlGTG~-Na~yie 261 (465)
..=.+.+.+|.+.-|+++ +.|+|+.+|++++-.+.. ++.++-+=+|-|+ ..+++.
T Consensus 148 ~~qr~~~~~Aa~~agl~~--~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~Gggt~dvs~~~ 206 (602)
T PF00012_consen 148 DEQRQALRDAAELAGLNV--LRLINEPTAAALAYGLERSDKGKTVLVVDFGGGTFDVSVVE 206 (602)
T ss_dssp HHHHHHHHHHHHHTT-EE--EEEEEHHHHHHHHTTTTSSSSEEEEEEEEEESSEEEEEEEE
T ss_pred hhhhhccccccccccccc--ceeecccccccccccccccccccceeccccccceEeeeehh
Confidence 445677888888788865 789999999988744332 2344444567665 445543
|
Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region []. Hsp70 proteins have an average molecular weight of 70 kDa [, , ]. In most species,there are many proteins that belong to the hsp70 family. Some of these are only expressed under stress conditions (strictly inducible), while some are present in cells under normal growth conditions and are not heat-inducible (constitutive or cognate) [, ]. Hsp70 proteins can be found in different cellular compartments(nuclear, cytosolic, mitochondrial, endoplasmic reticulum, for example).; PDB: 2P32_D 3D2F_A 2QXL_A 3D2E_C 3C7N_A 3FE1_C 4ANI_C 2V7Y_A 2KHO_A 3DPQ_B .... |
| >PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related | Back alignment and domain information |
|---|
Probab=91.67 E-value=1.7 Score=40.17 Aligned_cols=76 Identities=22% Similarity=0.182 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCC
Q 012386 364 ELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSND 443 (465)
Q Consensus 364 ~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~D 443 (465)
.++++|++=-|.-....+-.+-+..+.. .+ .|.+.||.. +.+.+.+.+-+.+. ..|.+...++
T Consensus 122 ~~~rAv~Egia~~~~~~~~~l~~~~~~~------~~--~i~~~GG~~-~n~~~~q~~Advl~--------~~V~~~~~~e 184 (198)
T PF02782_consen 122 DLARAVLEGIAFSLRQILEELEELTGIP------IR--RIRVSGGGA-KNPLWMQILADVLG--------RPVVRPEVEE 184 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSC------ES--EEEEESGGG-GSHHHHHHHHHHHT--------SEEEEESSST
T ss_pred HHHHHHHHhHHHHHHHhhhhcccccccc------ce--eeEeccccc-cChHHHHHHHHHhC--------CceEeCCCCc
Confidence 3444555544444444444443332431 13 466788877 78888888777652 3566666699
Q ss_pred hhHHHHHHHHHHh
Q 012386 444 GSGIGAALLAASH 456 (465)
Q Consensus 444 gs~iGAAl~Aa~~ 456 (465)
++.+|||++|+++
T Consensus 185 ~~a~GaA~~A~~a 197 (198)
T PF02782_consen 185 ASALGAALLAAVA 197 (198)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhh
Confidence 9999999999875
|
These enzymes include L-fucolokinase (2.7.1.51 from EC) (gene fucK); gluconokinase (2.7.1.12 from EC) (gene gntK); glycerol kinase (2.7.1.30 from EC) (gene glpK); xylulokinase (2.7.1.17 from EC) (gene xylB); and L-xylulose kinase (2.7.1.53 from EC) (gene lyxK). These enzymes are proteins of from 480 to 520 amino acid residues. This entry represents the C-terminal domain of these proteins. It adopts a ribonuclease H-like fold and is structurally related to the N-terminal domain [, ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 4E1J_B 2W40_C 2W41_A 2UYT_A 2CGK_B 2CGL_A 2CGJ_A 3GBT_A 3LL3_B 3HZ6_A .... |
| >COG0554 GlpK Glycerol kinase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=91.08 E-value=0.44 Score=50.36 Aligned_cols=74 Identities=20% Similarity=0.285 Sum_probs=56.2
Q ss_pred ceeEEEEEeCCceEEEEEEEecCCcceeEEEEe----eeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCc
Q 012386 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEF----EEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ 169 (465)
Q Consensus 94 ~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~----~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~ 169 (465)
..++++||-|-|+.|+.+++.+|+ ++.... +.||-|.-+ ..++.+++.-...++.+.+.+.+... .++
T Consensus 4 ~~yIlAiDqGTTssRaivfd~~g~---iva~~q~e~~Q~yP~~GWV-EhDp~eIw~~~~~~l~~a~~~~~i~~----~~i 75 (499)
T COG0554 4 DKYILAIDQGTTSSRAIVFDEDGN---IVAIAQREFTQIYPQPGWV-EHDPLEIWASVRSVLKEALAKAGIKP----GEI 75 (499)
T ss_pred ccEEEEEecCCcceeEEEECCCCC---chhhhhhhhhhhCCCCCcc-ccCHHHHHHHHHHHHHHHHHHcCCCc----cce
Confidence 468899999999999999998885 333221 234555443 46799999999999999998876543 567
Q ss_pred ceeeee
Q 012386 170 RELGFT 175 (465)
Q Consensus 170 ~~lG~t 175 (465)
..||+|
T Consensus 76 aaIGIT 81 (499)
T COG0554 76 AAIGIT 81 (499)
T ss_pred EEEEee
Confidence 888887
|
|
| >TIGR01174 ftsA cell division protein FtsA | Back alignment and domain information |
|---|
Probab=90.68 E-value=12 Score=38.55 Aligned_cols=57 Identities=19% Similarity=0.313 Sum_probs=39.0
Q ss_pred CcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc--CCceEEEEEEcccc-ceeEEccC
Q 012386 205 EDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH--NKDAIAAVILGTGT-NAAYVERA 263 (465)
Q Consensus 205 ~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~--~~~~~iglIlGTG~-Na~yie~~ 263 (465)
++..+.+.++++.-|+++ ..++++..|+..+.... .+...+-+=+|.|+ +.+++.++
T Consensus 157 ~~~v~~~~~~~~~aGl~~--~~i~~~~~A~a~a~~~~~~~~~~~~vvDiG~gtt~i~i~~~g 216 (371)
T TIGR01174 157 STILRNLVKCVERCGLEV--DNIVLSGLASAIAVLTEDEKELGVCLIDIGGGTTDIAVYTGG 216 (371)
T ss_pred HHHHHHHHHHHHHcCCCe--eeEEEhhhhhhhhhcCcchhcCCEEEEEeCCCcEEEEEEECC
Confidence 456677777887778765 68899999988864332 23456667788888 55565543
|
This bacterial cell division protein interacts with FtsZ, the bacterial homolog of tubulin. It is an ATP-binding protein and shows structural similarities to actin and heat shock cognate protein 70. |
| >TIGR02627 rhamnulo_kin rhamnulokinase | Back alignment and domain information |
|---|
Probab=90.27 E-value=0.5 Score=50.29 Aligned_cols=59 Identities=19% Similarity=0.065 Sum_probs=37.3
Q ss_pred EEEEeCCceEEEEEEEecCCcceeE-EEEeeeeecCCCc---ccCCcchHHHHHHHHHHHHHH
Q 012386 98 YALDLGGTNFRVLRVQLGGREGRVV-KQEFEEVSIPPHL---MTGSSHELFDYIAAALAKFVA 156 (465)
Q Consensus 98 LaiDlGGTNlRv~~V~l~g~~~~i~-~~~~~~~~ip~~~---~~~~~~~lfd~Ia~~I~~fl~ 156 (465)
||||+|.|+.|+.+++.++..+++. ...++..+...+. ...+.+++++.+.+++++...
T Consensus 1 ~aiD~Gtt~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~ 63 (454)
T TIGR02627 1 VAVDLGASSGRVMLASYENECQKLTLEEIHRFKNGLVSQNGHECWDIDALEQEIRLGLNKVDA 63 (454)
T ss_pred CcEeccCCchheEEEEEcCCCceEEEEEEEeCCCCCEeECCEEEEehHHHHHHHHHHHHHHhc
Confidence 5899999999999999985423444 2222221111111 012356788899999888865
|
This model describes rhamnulokinase, an enzyme that catalyzes the second step in rhamnose catabolism. |
| >TIGR01175 pilM type IV pilus assembly protein PilM | Back alignment and domain information |
|---|
Probab=90.02 E-value=2.7 Score=42.77 Aligned_cols=62 Identities=19% Similarity=0.407 Sum_probs=40.8
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhC
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEG 159 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~ 159 (465)
.++|||+|.+++|++.++..+++.++.. ....++|.+....+.-.=.+.+++.|++.+++.+
T Consensus 4 ~~vgiDIg~~~Ik~v~~~~~~~~~~v~~--~~~~~~p~~~i~~g~i~d~~~~~~~l~~~~~~~~ 65 (348)
T TIGR01175 4 LLVGIDIGSTSVKVAQLKRSGDRYKLEH--YAVEPLPAGIFTEGHIVEYQAVAEALKELLSELG 65 (348)
T ss_pred cEEEEEeccCeEEEEEEEecCCceEEEE--EEEEECCCCcccCCCccCHHHHHHHHHHHHHHcC
Confidence 5899999999999998886554334443 2356788665432211123567788888887765
|
This protein is required for the assembly of the type IV fimbria in Pseudomonas aeruginosa responsible for twitching motility, and for a similar pilus-like structure in Synechocystis. It is also found in species such as Deinococcus described as having natural transformation (for which a type IV pilus-like structure is proposed) but not fimbria. |
| >COG1069 AraB Ribulose kinase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=89.84 E-value=1.1 Score=48.14 Aligned_cols=75 Identities=19% Similarity=0.248 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHH
Q 012386 369 VATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIG 448 (465)
Q Consensus 369 V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iG 448 (465)
+..+....+|-|.-.|+..+...+. .-+ ++-+-||. .++|.+.+.+-+.. .+.+.+..+++...+|
T Consensus 406 lY~a~l~a~A~GtR~Iie~~~~~g~---~Id--~l~~sGG~-~KN~llmql~aDvt--------g~~v~i~~s~~a~llG 471 (544)
T COG1069 406 LYRALLEATAFGTRAIIETFEDQGI---AID--TLFASGGI-RKNPLLMQLYADVT--------GRPVVIPASDQAVLLG 471 (544)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHcCC---eee--EEEecCCc-ccCHHHHHHHHHhc--------CCeEEeecccchhhhH
Confidence 4455666788888999998876432 113 57778888 89999888877754 3578889999999999
Q ss_pred HHHHHHHhc
Q 012386 449 AALLAASHS 457 (465)
Q Consensus 449 AAl~Aa~~~ 457 (465)
+|+.+|+++
T Consensus 472 sAm~~avAa 480 (544)
T COG1069 472 AAMFAAVAA 480 (544)
T ss_pred HHHHHHHHh
Confidence 999999877
|
|
| >KOG0104 consensus Molecular chaperones GRP170/SIL1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=87.93 E-value=13 Score=41.65 Aligned_cols=83 Identities=20% Similarity=0.181 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEE
Q 012386 359 RKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVI 438 (465)
Q Consensus 359 ~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l 438 (465)
++.+.++|.....|+..=+=-+|.---..++. .+ .+|-+|||. .-|...+.+++++.+- +--+.
T Consensus 333 Re~fEelc~Dl~~r~~~Pi~dAl~~a~l~lde-------In-~ViL~Gg~T--RVP~VQe~l~k~v~~~------ei~kn 396 (902)
T KOG0104|consen 333 REEFEELCADLEERIVEPINDALKKAQLSLDE-------IN-QVILFGGAT--RVPKVQETLIKAVGKE------ELGKN 396 (902)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhcCCChhh-------hh-eeEEecCcc--cCchHHHHHHHHHhHH------HHhcc
Confidence 66778899999999876554444311111111 12 256677765 5676666666665432 11123
Q ss_pred EEeCChhHHHHHHHHHHhc
Q 012386 439 EHSNDGSGIGAALLAASHS 457 (465)
Q Consensus 439 ~~a~Dgs~iGAAl~Aa~~~ 457 (465)
.-++++...||++-||--+
T Consensus 397 lNaDEA~vmGav~~aA~LS 415 (902)
T KOG0104|consen 397 LNADEAAVMGAVYQAAHLS 415 (902)
T ss_pred cChhHHHHHHHHHHHHhhc
Confidence 4578999999999987654
|
|
| >KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.62 E-value=8.5 Score=41.56 Aligned_cols=49 Identities=24% Similarity=0.312 Sum_probs=36.5
Q ss_pred EEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHHHHhccc
Q 012386 402 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQY 459 (465)
Q Consensus 402 ~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~Aa~~~~~ 459 (465)
++.++||+.+ .|.|.+...+.+ + ..|.+-.--|..++|||+++++++..
T Consensus 417 ~L~~~GG~s~-N~ll~Q~~ADi~----g----~pv~~p~~~e~~~~GaA~l~~~a~~~ 465 (516)
T KOG2517|consen 417 TLRVCGGLSK-NPLLMQLQADIL----G----LPVVRPQDVEAVALGAAMLAGAASGK 465 (516)
T ss_pred eeeecccccc-CHHHHHHHHHHh----C----CccccccchhHHHHHHHHHHHhhcCC
Confidence 5889999975 788887776644 3 24555555677999999999998854
|
|
| >PRK15080 ethanolamine utilization protein EutJ; Provisional | Back alignment and domain information |
|---|
Probab=85.85 E-value=14 Score=36.41 Aligned_cols=136 Identities=18% Similarity=0.217 Sum_probs=73.5
Q ss_pred CCCCcceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCC-cccCCcchHHHHHHHHHHHHHHhhCCCCCCCCC
Q 012386 89 PTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPG 167 (465)
Q Consensus 89 P~G~E~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~-~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~ 167 (465)
|.-+..+.+++||+|-|++|+...+..++ ++... ..|.+ ++.+.-.+ ++.....|+.+++....... .
T Consensus 18 ~~~~~~~~~~~iDiGSssi~~vv~~~~~~---~~~~~----~~~~~~vr~G~i~d-i~~a~~~i~~~~~~ae~~~g---~ 86 (267)
T PRK15080 18 PVATESPLKVGVDLGTANIVLAVLDEDGQ---PVAGA----LEWADVVRDGIVVD-FIGAVTIVRRLKATLEEKLG---R 86 (267)
T ss_pred CCCCCCCEEEEEEccCceEEEEEEcCCCC---EEEEE----eccccccCCCEEee-HHHHHHHHHHHHHHHHHHhC---C
Confidence 33456778999999999999888765443 33222 22332 32332222 66666777777663211000 1
Q ss_pred CcceeeeeeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCCceEE
Q 012386 168 RQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIA 247 (465)
Q Consensus 168 ~~~~lG~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~~~~i 247 (465)
+...+. .+.|..++. .+ ...+.+++++-|+++ ..++++..|+..+-.+ .+ .+
T Consensus 87 ~i~~v~--~~vp~~~~~--------------------~~-~~~~~~~~~~aGl~~--~~ii~e~~A~a~~~~~--~~-~~ 138 (267)
T PRK15080 87 ELTHAA--TAIPPGTSE--------------------GD-PRAIINVVESAGLEV--THVLDEPTAAAAVLGI--DN-GA 138 (267)
T ss_pred CcCeEE--EEeCCCCCc--------------------hh-HHHHHHHHHHcCCce--EEEechHHHHHHHhCC--CC-cE
Confidence 122222 245543321 11 223557777778875 5799999987765322 22 34
Q ss_pred EEEEcccc-ceeEEccC
Q 012386 248 AVILGTGT-NAAYVERA 263 (465)
Q Consensus 248 glIlGTG~-Na~yie~~ 263 (465)
-+=+|-|+ +.+++.++
T Consensus 139 vvDIGggtt~i~v~~~g 155 (267)
T PRK15080 139 VVDIGGGTTGISILKDG 155 (267)
T ss_pred EEEeCCCcEEEEEEECC
Confidence 45566666 55555443
|
|
| >COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=82.14 E-value=10 Score=38.61 Aligned_cols=125 Identities=17% Similarity=0.269 Sum_probs=78.4
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCC-----CCC----
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFH-----VSP---- 166 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~-----~~~---- 166 (465)
..+|||+|-+.+++.-..-.|+...+ ++....++|.+.+..+.-.=.+.+++.|+..+.+++.... .+.
T Consensus 11 ~~vGIdI~~~sVKvvqLs~~g~~~kL--e~y~~~~lp~~iv~dg~ivd~~av~~~Lk~ala~~gi~~k~aa~AVP~s~ai 88 (354)
T COG4972 11 AAVGIDIGSHSVKVVQLSRSGNRYKL--EKYASEPLPENIVADGKIVDYDAVASALKRALAKLGIKSKNAATAVPGSAAI 88 (354)
T ss_pred ceeeEeeccceEEEEEEcccCCceee--eeeeecccCccccccCCcccHHHHHHHHHHHHHhcCcchhhhhhhcCcccee
Confidence 47899999999999776644543322 2334678999887544434467889999999888765431 000
Q ss_pred CC-----------------cceeeeeeecccccccCCceEEeccCCccccCC----CCCCcHHHHHHHHHHHcCCCe
Q 012386 167 GR-----------------QRELGFTFSFPVRQTSIASGDLIKWTKGFSIED----TVGEDVVGELTKAMERIGLDM 222 (465)
Q Consensus 167 ~~-----------------~~~lG~tfSfPv~q~~i~~g~Li~wtKgF~~~~----~~g~dv~~~L~~al~~~gl~v 222 (465)
.+ ....+--+|||++.-+++--.|-....+=.-.. ..-+++++...++|+.-|+..
T Consensus 89 tk~i~vp~~lde~eL~~~V~~ea~~y~PyP~EEv~lDy~vlg~~~~~~e~v~Vll~AtrkE~v~~ri~a~~~AGl~~ 165 (354)
T COG4972 89 TKTIPVPDELDEKELEDQVESEASRYIPYPLEEVNLDYQVLGPSANEPEKVQVLLVATRKEVVESRIDAFELAGLEP 165 (354)
T ss_pred eEEeccCCcccHHHHHHHHHHHHhhcCCCchhhcccceEEeccccCCCccEEEEEEEeehhhhHHHHHHHHHcCCCc
Confidence 00 024567789999877665444422211100000 123789999999998889865
|
|
| >PRK09472 ftsA cell division protein FtsA; Reviewed | Back alignment and domain information |
|---|
Probab=80.15 E-value=43 Score=35.31 Aligned_cols=55 Identities=22% Similarity=0.299 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccC--CceEEEEEEcccc-ceeEEccC
Q 012386 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN--KDAIAAVILGTGT-NAAYVERA 263 (465)
Q Consensus 207 v~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~--~~~~iglIlGTG~-Na~yie~~ 263 (465)
..+.+.+++++.|+++ ..++++..|+..+.-+.+ ....+-+=+|-|+ +.+++.++
T Consensus 167 ~~~~~~~a~~~aGl~v--~~iv~ep~Aaa~a~l~~~e~~~gv~vvDiGggtTdisv~~~G 224 (420)
T PRK09472 167 MAKNIVKAVERCGLKV--DQLIFAGLASSYAVLTEDERELGVCVVDIGGGTMDIAVYTGG 224 (420)
T ss_pred HHHHHHHHHHHcCCeE--eeEEehhhHHHHHhcChhhhhcCeEEEEeCCCceEEEEEECC
Confidence 3445566777677776 688999998888754433 2345666789888 56666543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 465 | ||||
| 3o08_A | 485 | Crystal Structure Of Dimeric Klhxk1 In Crystal Form | 2e-57 | ||
| 1bg3_A | 918 | Rat Brain Hexokinase Type I Complex With Glucose An | 1e-54 | ||
| 1bdg_A | 451 | Hexokinase From Schistosoma Mansoni Complexed With | 1e-54 | ||
| 1hkc_A | 917 | Recombinant Human Hexokinase Type I Complexed With | 1e-53 | ||
| 1hkb_A | 917 | Crystal Structure Of Recombinant Human Brain Hexoki | 1e-53 | ||
| 1cza_N | 917 | Mutant Monomer Of Recombinant Human Hexokinase Type | 1e-53 | ||
| 1dgk_N | 917 | Mutant Monomer Of Recombinant Human Hexokinase Type | 6e-53 | ||
| 3hm8_A | 445 | Crystal Structure Of The C-Terminal Hexokinase Doma | 2e-51 | ||
| 2nzt_A | 902 | Crystal Structure Of Human Hexokinase Ii Length = 9 | 3e-51 | ||
| 1ig8_A | 486 | Crystal Structure Of Yeast Hexokinase Pii With The | 3e-50 | ||
| 4dch_A | 473 | Insights Into Glucokinase Activation Mechanism: Obs | 7e-46 | ||
| 3imx_A | 455 | Crystal Structure Of Human Glucokinase In Complex W | 9e-46 | ||
| 3s41_A | 469 | Glucokinase In Complex With Activator And Glucose L | 9e-46 | ||
| 3fr0_A | 455 | Human Glucokinase In Complex With 2-Amino Benzamide | 9e-46 | ||
| 1v4t_A | 451 | Crystal Structure Of Human Glucokinase Length = 451 | 9e-46 | ||
| 3f9m_A | 470 | Human Pancreatic Glucokinase In Complex With Glucos | 1e-45 | ||
| 1v4s_A | 455 | Crystal Structure Of Human Glucokinase Length = 455 | 1e-45 | ||
| 3qic_A | 470 | The Structure Of Human Glucokinase E339k Mutation L | 2e-45 | ||
| 3b8a_X | 485 | Crystal Structure Of Yeast Hexokinase Pi In Complex | 7e-45 |
| >pdb|3O08|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I Length = 485 | Back alignment and structure |
|
| >pdb|1BG3|A Chain A, Rat Brain Hexokinase Type I Complex With Glucose And Inhibitor Glucose-6-Phosphate Length = 918 | Back alignment and structure |
|
| >pdb|1BDG|A Chain A, Hexokinase From Schistosoma Mansoni Complexed With Glucose Length = 451 | Back alignment and structure |
|
| >pdb|1HKC|A Chain A, Recombinant Human Hexokinase Type I Complexed With Glucose And Phosphate Length = 917 | Back alignment and structure |
|
| >pdb|1HKB|A Chain A, Crystal Structure Of Recombinant Human Brain Hexokinase Type I Complexed With Glucose And Glucose-6-Phosphate Length = 917 | Back alignment and structure |
|
| >pdb|1CZA|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I Complexed With Glucose, Glucose-6-Phosphate, And Adp Length = 917 | Back alignment and structure |
|
| >pdb|1DGK|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I With Glucose And Adp In The Active Site Length = 917 | Back alignment and structure |
|
| >pdb|3HM8|A Chain A, Crystal Structure Of The C-Terminal Hexokinase Domain Of Human Hk3 Length = 445 | Back alignment and structure |
|
| >pdb|2NZT|A Chain A, Crystal Structure Of Human Hexokinase Ii Length = 902 | Back alignment and structure |
|
| >pdb|1IG8|A Chain A, Crystal Structure Of Yeast Hexokinase Pii With The Correct Amino Acid Sequence Length = 486 | Back alignment and structure |
|
| >pdb|4DCH|A Chain A, Insights Into Glucokinase Activation Mechanism: Observation Of Multiple Distinct Protein Conformations Length = 473 | Back alignment and structure |
|
| >pdb|3IMX|A Chain A, Crystal Structure Of Human Glucokinase In Complex With A Synthetic Activator Length = 455 | Back alignment and structure |
|
| >pdb|3S41|A Chain A, Glucokinase In Complex With Activator And Glucose Length = 469 | Back alignment and structure |
|
| >pdb|3FR0|A Chain A, Human Glucokinase In Complex With 2-Amino Benzamide Activator Length = 455 | Back alignment and structure |
|
| >pdb|1V4T|A Chain A, Crystal Structure Of Human Glucokinase Length = 451 | Back alignment and structure |
|
| >pdb|3F9M|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose And Activator Showing A Mobile Flap Length = 470 | Back alignment and structure |
|
| >pdb|1V4S|A Chain A, Crystal Structure Of Human Glucokinase Length = 455 | Back alignment and structure |
|
| >pdb|3QIC|A Chain A, The Structure Of Human Glucokinase E339k Mutation Length = 470 | Back alignment and structure |
|
| >pdb|3B8A|X Chain X, Crystal Structure Of Yeast Hexokinase Pi In Complex With Glucose Length = 485 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 465 | |||
| 1bdg_A | 451 | Hexokinase; phosphotransferase; HET: GLC; 2.60A {S | 1e-150 | |
| 3o8m_A | 485 | Hexokinase; rnaseh-like fold, glycolysis, glucose | 1e-147 | |
| 3f9m_A | 470 | Glucokinase; hexokinase IV, ATP-binding, diabetes | 1e-141 | |
| 3hm8_A | 445 | Hexokinase-3; glucose, glucose-6-phosphate, non-pr | 1e-139 | |
| 1cza_N | 917 | Hexokinase type I; structurally homologous domains | 1e-137 | |
| 1cza_N | 917 | Hexokinase type I; structurally homologous domains | 1e-124 | |
| 2yhx_A | 457 | Hexokinase B; transferase(phosphoryl,alcohol accep | 1e-117 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-08 |
| >1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3 Length = 451 | Back alignment and structure |
|---|
Score = 433 bits (1114), Expect = e-150
Identities = 141/454 (31%), Positives = 218/454 (48%), Gaps = 52/454 (11%)
Query: 41 LKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFY 98
+ E+ + + ++ D M M GL S +KM SYV P G E G F
Sbjct: 12 VVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFL 71
Query: 99 ALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATE 158
ALDLGGTN+RVL V L G +G+ + + IP M+GS ELF YIA LA F+
Sbjct: 72 ALDLGGTNYRVLSVTLEG-KGKSPRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENN 130
Query: 159 GEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI 218
G ++ +LGFTFSFP Q + L++WTKGFS + G +V L +++
Sbjct: 131 G-----MKDKKFDLGFTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTELDKR 185
Query: 219 GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHG------- 271
L+++ A+VNDT+GTLA + +I+GTGTN AY+E + + G
Sbjct: 186 ELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMDGVKEPEVV 245
Query: 272 --------------LLPKS-------------GEMIFEKIISGMYLGEIVRRVLCRMAEE 304
++ G+ ++EK++SGMYLGE+VR ++ + E+
Sbjct: 246 INTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQ 305
Query: 305 ANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVE 364
F +P +LK+ L T +++ + D + L L D L + ++V
Sbjct: 306 KILFRGDLPERLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRY 365
Query: 365 LCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTV 424
C++V R A L+ AGI IL+++ R + + +DG L++ + KF M V
Sbjct: 366 ACEMVVKRAAYLAGAGIACILRRINRS--------EVTVGVDGSLYKFHPKFCERMTDMV 417
Query: 425 KELLGEEVSETVVIEHSNDGSGIGAALLAASHSQ 458
+L + + S DGSG GAA +AAS ++
Sbjct: 418 DKLKPKNTR--FCLRLSEDGSGKGAAAIAASCTR 449
|
| >3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X* Length = 485 | Back alignment and structure |
|---|
Score = 427 bits (1100), Expect = e-147
Identities = 152/483 (31%), Positives = 223/483 (46%), Gaps = 58/483 (12%)
Query: 26 RRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYV 85
R+ A + + +E K+R + E+ GL+ +GG+ + M+ +V
Sbjct: 12 RKGSMADVPANLMEQIHGLETLFTVSSEKMRSIVKHFISELDKGLSKKGGN-IPMIPGWV 70
Query: 86 DNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFD 145
PTG E G F ALDLGGTN RV+ V+LGG Q + +P HL TG+S +L+
Sbjct: 71 VEYPTGKETGDFLALDLGGTNLRVVLVKLGGNHDFDTTQN--KYRLPDHLRTGTSEQLWS 128
Query: 146 YIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGE 205
+IA L +FV LGFTFS+P Q I SG L +WTKGF IE G
Sbjct: 129 FIAKCLKEFVDEWYPD---GVSEPLPLGFTFSYPASQKKINSGVLQRWTKGFDIEGVEGH 185
Query: 206 DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHA 265
DVV L + +E++ + + V AL+NDT GTL Y + +I+GTG N AY +
Sbjct: 186 DVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSG 245
Query: 266 IPKWHGLLPKS---------------------------------------GEMIFEKIIS 286
I K GLLP+ G+ FEK+ S
Sbjct: 246 IEKLEGLLPEDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTS 305
Query: 287 GMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLK 346
G YLGEI+R VL + + F D KLK +++ T + S + D +L K
Sbjct: 306 GYYLGEIMRLVLLDLYDSGFIFKDQDISKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFK 365
Query: 347 DILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALD 406
L I T++ RKL+ +L ++V TR ARL+ G+ I K G + IA D
Sbjct: 366 TNLNI-ETTVVERKLIRKLAELVGTRAARLTVCGVSAICDKRGYK--------TAHIAAD 416
Query: 407 GGLFEHYTKFSACMQSTVKELLGEEVSET----VVIEHSNDGSGIGAALLAASHSQYLEV 462
G +F Y + +K++ +V + + + + DGSG+GAA++A + L
Sbjct: 417 GSVFNRYPGYKEKAAQALKDIYNWDVEKMEDHPIQLVAAEDGSGVGAAIIACLTQKRLAA 476
Query: 463 EES 465
+S
Sbjct: 477 GKS 479
|
| >3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A* Length = 470 | Back alignment and structure |
|---|
Score = 412 bits (1060), Expect = e-141
Identities = 136/457 (29%), Positives = 216/457 (47%), Gaps = 51/457 (11%)
Query: 41 LKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGG--SKLKMLISYVDNLPTGDEKGLFY 98
++++ + L++V M EM GL E + +KML +YV + P G E G F
Sbjct: 21 VEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFL 80
Query: 99 ALDLGGTNFRVLRVQLGGREG--RVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVA 156
+LDLGGTNFRV+ V++G E VK + + SIP MTG++ LFDYI+ ++ F+
Sbjct: 81 SLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLD 140
Query: 157 TEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAME 216
H ++ LGFTFSFPVR I G L+ WTKGF G +VVG L A++
Sbjct: 141 K-----HQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIK 195
Query: 217 RIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHG---- 271
R G +M V A+VNDT+ T+ Y + +I+GTG NA Y+E + G
Sbjct: 196 RRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDEGR 255
Query: 272 ----------------LLPKS-------------GEMIFEKIISGMYLGEIVRRVLCRMA 302
G+ ++EK+I G Y+GE+VR VL R+
Sbjct: 256 MCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLV 315
Query: 303 EEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLV 362
+E F +L+ T +S + DT ++ + L + S +V
Sbjct: 316 DENLLFHGEASEQLRTRGAFETRFVSQVESDTGDRKQI--YNILSTLGL-RPSTTDCDIV 372
Query: 363 VELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQS 422
C+ V+TR A + +AG+ G++ ++ R + + + +DG +++ + F +
Sbjct: 373 RRACESVSTRAAHMCSAGLAGVINRMRES--RSEDVMRITVGVDGSVYKLHPSFKERFHA 430
Query: 423 TVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQY 459
+V+ L + S +GSG GAAL++A +
Sbjct: 431 SVRRLTPS---CEITFIESEEGSGRGAALVSAVACKK 464
|
| >3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens} Length = 445 | Back alignment and structure |
|---|
Score = 405 bits (1043), Expect = e-139
Identities = 154/458 (33%), Positives = 224/458 (48%), Gaps = 52/458 (11%)
Query: 40 ILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYA 99
+L+E +L V M M GL E S L+ML ++V P G E+G F A
Sbjct: 5 LLEETLAPFRLNHDQLAAVQAQMRKAMAKGLRGEA-SSLRMLPTFVRATPDGSERGDFLA 63
Query: 100 LDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEG 159
LDLGGTNFRVL V++ V+ E SIP + GS +LFD+I + F +G
Sbjct: 64 LDLGGTNFRVLLVRVTTG----VQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQG 119
Query: 160 EGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG 219
G+ LGFTFSFP RQ + G L+ WTKGF D G+DVV L +A+ R
Sbjct: 120 -----LSGQSLPLGFTFSFPCRQLGLDQGILLNWTKGFKASDCEGQDVVSLLREAITRRQ 174
Query: 220 -LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHG------- 271
+++ V A+VNDT+GT+ Y + +I+GTGTNA Y+E + G
Sbjct: 175 AVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPGDSGRMCI 234
Query: 272 -------------LLP-------------KSGEMIFEKIISGMYLGEIVRRVLCRMAEEA 305
+ G+ FEK+ISGMYLGEIVR +L +
Sbjct: 235 NMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLTSLG 294
Query: 306 NFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVEL 365
F +L+ I +T +S + D S LR V L+D L + TS +V+E+
Sbjct: 295 VLFRGQQIQRLQTRDIFKTKFLSEIESD-SLALRQVRAILED-LGLPLTS-DDALMVLEV 351
Query: 366 CDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVK 425
C V+ R A+L AG+ +++K+ + R E+ + +DG L++ + +FS+ + +TV+
Sbjct: 352 CQAVSQRAAQLCGAGVAAVVEKIREN--RGLEELAVSVGVDGTLYKLHPRFSSLVAATVR 409
Query: 426 ELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYLEVE 463
EL V V S DGSG GAAL+ A + ++
Sbjct: 410 ELAPRCV---VTFLQSEDGSGKGAALVTAVACRLAQLT 444
|
| >1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* Length = 917 | Back alignment and structure |
|---|
Score = 416 bits (1070), Expect = e-137
Identities = 153/472 (32%), Positives = 224/472 (47%), Gaps = 49/472 (10%)
Query: 26 RRMKSTGRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGG--SKLKMLIS 83
R A ++E L +V M EM GL + + +KML S
Sbjct: 455 MVTAVAYRLAEQHRQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPS 514
Query: 84 YVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHEL 143
+V P G E G F ALDLGGTNFRVL V++ + R V+ + +IP +M G+ EL
Sbjct: 515 FVRRTPDGTENGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIEIMQGTGEEL 574
Query: 144 FDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTV 203
FD+I + ++ F+ G G + LGFTFSFP +QTS+ +G LI WTKGF D V
Sbjct: 575 FDHIVSCISDFLDYMG-----IKGPRMPLGFTFSFPCQQTSLDAGILITWTKGFKATDCV 629
Query: 204 GEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVER 262
G DVV L A++R D+ V A+VNDT+GT+ Y +I+GTG+NA Y+E
Sbjct: 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEE 689
Query: 263 AHAIPKWHG--------------------LLPKS-------------GEMIFEKIISGMY 289
+ G ++ G+ +EK+ISGMY
Sbjct: 690 MKNVEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMY 749
Query: 290 LGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDIL 349
LGEIVR +L ++ F + LK I T +S + D L+V + + L
Sbjct: 750 LGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQV--RAILQQL 807
Query: 350 EISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGL 409
+ N++ LV +C +V+ R A+L AG+ ++ K+ + R ++ + +DG L
Sbjct: 808 GL-NSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIREN--RGLDRLNVTVGVDGTL 864
Query: 410 FEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYLE 461
++ + FS M TVKEL + V S DGSG GAAL+ A +
Sbjct: 865 YKLHPHFSRIMHQTVKELSPK---CNVSFLLSEDGSGKGAALITAVGVRLRT 913
|
| >1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* Length = 917 | Back alignment and structure |
|---|
Score = 381 bits (979), Expect = e-124
Identities = 128/438 (29%), Positives = 208/438 (47%), Gaps = 46/438 (10%)
Query: 41 LKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGG--SKLKMLISYVDNLPTGDEKGLFY 98
+ + L + EM GL+ + + +KML ++V ++P G EKG F
Sbjct: 22 IDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFI 81
Query: 99 ALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATE 158
ALDLGG++FR+LRVQ+ + + V E E P +++ GS +LFD++A L F+
Sbjct: 82 ALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKR 141
Query: 159 GEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI 218
P +GFTFSFP +Q+ I LI WTK F G DVV L KA+++
Sbjct: 142 KIKDKKLP-----VGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKR 196
Query: 219 G-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHG------ 271
G D + A+VNDT+GT+ Y ++ +I+GTGTNA Y+E I G
Sbjct: 197 GDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDEGRMC 256
Query: 272 --------------LLPKS-------------GEMIFEKIISGMYLGEIVRRVLCRMAEE 304
++ G+ +FEK++SGMYLGE+VR +L +MA+E
Sbjct: 257 INTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKE 316
Query: 305 ANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVE 364
F + P+L T +SA+ + K++ L + S V
Sbjct: 317 GLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNA--KEILTRLGV-EPSDDDCVSVQH 373
Query: 365 LCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTV 424
+C IV+ R A L AA + IL +L + + + ++ + +DG L++ + ++S T+
Sbjct: 374 VCTIVSFRSANLVAATLGAILNRLRDN--KGTPRLRTTVGVDGSLYKTHPQYSRRFHKTL 431
Query: 425 KELLGEEVSETVVIEHSN 442
+ L+ + ++ E +
Sbjct: 432 RRLVPDSDVRFLLSESGS 449
|
| >2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A Length = 457 | Back alignment and structure |
|---|
Score = 350 bits (900), Expect = e-117
Identities = 81/460 (17%), Positives = 142/460 (30%), Gaps = 61/460 (13%)
Query: 35 ARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEK 94
A ++++ P L+ V +T +S + + M+ +V +G +
Sbjct: 3 AXDXSLVEVHXXVFIVPPXILQAVVSILTTRXDDXDSS--AASIPMVPGWVLKQVSGAQA 60
Query: 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKF 154
G F A+ +GG + V+ + L GR+ + T +L+ A + A F
Sbjct: 61 GSFLAIVMGGGDLEVILISLAGRQESSIXAS--RSLAAAMSTTAIPSDLWGNXAXSNAAF 118
Query: 155 VATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKA 214
+ E S LGFTF + + G + FS+ ++ + A
Sbjct: 119 SSXE----FSSXAGSVPLGFTFXEAGAKEXVIKGQITXQAXAFSL--AXLXKLISAMXNA 172
Query: 215 MERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKW----- 269
G A + D+ G L Y + +I G+G NAAY + I
Sbjct: 173 XFPAGDXXXSVADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGX 232
Query: 270 -------------------HGLLPKS------------GEMIFEKIISGMYLGEIVRRVL 298
LP+ F K G+ +R VL
Sbjct: 233 XGGAGXMXICCDQSSFRKAFPSLPQIXYLXTLNXXSPXAXKTFXKNSXAKNXGQSLRDVL 292
Query: 299 CRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKM 358
+ T + + + DLR I+ +
Sbjct: 293 MXFKXXGQXHXXX-AXSFXAANVENTSYPAKIQKLPHFDLRXXXDLFXGDQGIAXKTXM- 350
Query: 359 RKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSA 418
+ +V ++A RL I I +K G + IA G Y+ FS
Sbjct: 351 KXVVRRXLFLIAAYAFRLVVCXIXAICQKKGYSSG--------HIAAXGS-XRSYSGFSX 401
Query: 419 CMQSTVKELLGEEVSE----TVVIEHSNDGSGIGAALLAA 454
+ + G S + I + DG G + ++ +
Sbjct: 402 NSATXNXNIYGWPQSAXXSKPIXITPAIDGXGAASXVIXS 441
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.6 bits (133), Expect = 2e-08
Identities = 76/495 (15%), Positives = 147/495 (29%), Gaps = 155/495 (31%)
Query: 1 M---GKVTVAATVVCAAAVCAAAALVVRRRMK------STGRWARAVAILKEMEEKCGTP 51
+ GK T V A VC + V+ +M + +L+ +++
Sbjct: 158 VLGSGK-----TWV-ALDVCLSYK--VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQI 209
Query: 52 IGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLR 111
+D + ++L+ L+ K L VL
Sbjct: 210 DPNWTSRSDHSSNIKL--RIHSIQAELRRLLK---------SKPYENCLL-------VLL 251
Query: 112 -VQLGGREGRVVKQEFE-EVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ 169
VQ + F I L+T ++ D+++AA ++ + ++P
Sbjct: 252 NVQ----NAKAWNA-FNLSCKI---LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303
Query: 170 RELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG---LDMRVAA 226
+ L L+K+ +D L + + L + +A
Sbjct: 304 KSL-----------------LLKYL-DCRPQD---------LPREVLTTNPRRLSI-IAE 335
Query: 227 LVNDTIGTLAGGRYHNKDAIAAVI------LGTG-TNAAYVE----RAHA-IPK------ 268
+ D + T ++ N D + +I L + A IP
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLI 395
Query: 269 WHGLLPKSGEMIFEKI----------------ISGMYL---------GEIVRRVLCRMAE 303
W ++ ++ K+ I +YL + R ++
Sbjct: 396 WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNI 455
Query: 304 EANFFG-DTVPPKLK------IPFILRTPHMSAMHHDTSP--------DLRVVGKKLK-- 346
F D +PP L I H+ + H D R + +K++
Sbjct: 456 PKTFDSDDLIPPYLDQYFYSHIGH-----HLKNIEHPERMTLFRMVFLDFRFLEQKIRHD 510
Query: 347 -----DILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKS 401
I NT +++ +CD ++A I+ L K+ + + K
Sbjct: 511 STAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNA--ILDFLPKIEENLICS--KYTD 566
Query: 402 V--IAL---DGGLFE 411
+ IAL D +FE
Sbjct: 567 LLRIALMAEDEAIFE 581
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 465 | |||
| 3f9m_A | 470 | Glucokinase; hexokinase IV, ATP-binding, diabetes | 100.0 | |
| 3hm8_A | 445 | Hexokinase-3; glucose, glucose-6-phosphate, non-pr | 100.0 | |
| 3o8m_A | 485 | Hexokinase; rnaseh-like fold, glycolysis, glucose | 100.0 | |
| 1bdg_A | 451 | Hexokinase; phosphotransferase; HET: GLC; 2.60A {S | 100.0 | |
| 2yhx_A | 457 | Hexokinase B; transferase(phosphoryl,alcohol accep | 100.0 | |
| 1cza_N | 917 | Hexokinase type I; structurally homologous domains | 100.0 | |
| 1cza_N | 917 | Hexokinase type I; structurally homologous domains | 100.0 | |
| 3vgl_A | 321 | Glucokinase; ROK family, transferase; HET: BGC ANP | 99.95 | |
| 1z05_A | 429 | Transcriptional regulator, ROK family; structural | 99.95 | |
| 2qm1_A | 326 | Glucokinase; alpha-beta structure, putative helix- | 99.95 | |
| 1z6r_A | 406 | MLC protein; transcriptional repressor, ROK family | 99.95 | |
| 3r8e_A | 321 | Hypothetical sugar kinase; ribonuclease H-like mot | 99.95 | |
| 2hoe_A | 380 | N-acetylglucosamine kinase; TM1224, structural gen | 99.95 | |
| 3vov_A | 302 | Glucokinase, hexokinase; ROK, sugar kinase, transf | 99.94 | |
| 4db3_A | 327 | Glcnac kinase, N-acetyl-D-glucosamine kinase; stru | 99.94 | |
| 4htl_A | 297 | Beta-glucoside kinase; structural genomics, sugar | 99.93 | |
| 2ap1_A | 327 | Putative regulator protein; zinc binding protein, | 99.93 | |
| 2yhw_A | 343 | Bifunctional UDP-N-acetylglucosamine 2-epimerase/N | 99.93 | |
| 3htv_A | 310 | D-allose kinase, allokinase; NP_418508.1, structur | 99.92 | |
| 2aa4_A | 289 | Mannac kinase, putative N-acetylmannosamine kinase | 99.92 | |
| 2gup_A | 292 | ROK family protein; sugar kinase, streptococcus pn | 99.91 | |
| 3mcp_A | 366 | Glucokinase; structural genomics, joint center for | 99.9 | |
| 3epq_A | 302 | Putative fructokinase; SCRK, ADP binding, PSI2, MC | 99.9 | |
| 1sz2_A | 332 | Glucokinase, glucose kinase; ATP-dependent, glucos | 99.89 | |
| 2ch5_A | 347 | NAGK protein; transferase, N-acetylglucosamine, gl | 99.88 | |
| 2q2r_A | 373 | Glucokinase 1, putative; ATPase hexose kinase fami | 99.88 | |
| 1woq_A | 267 | Inorganic polyphosphate/ATP-glucomannokinase; tran | 99.86 | |
| 2e2o_A | 299 | Hexokinase; acetate and sugar kinases, HSP70, acti | 99.8 | |
| 1saz_A | 381 | Probable butyrate kinase 2; askha (acetate and sug | 99.79 | |
| 3lm2_A | 226 | Putative kinase; structural genomics, joint center | 99.76 | |
| 1zc6_A | 305 | Probable N-acetylglucosamine kinase; NESG, Q7NU07_ | 99.71 | |
| 1zbs_A | 291 | Hypothetical protein PG1100; alpha-beta protein., | 99.71 | |
| 1zxo_A | 291 | Conserved hypothetical protein Q8A1P1; NESG, BTR25 | 99.7 | |
| 4ehu_A | 276 | Activator of 2-hydroxyisocaproyl-COA dehydratase; | 97.78 | |
| 3ifr_A | 508 | Carbohydrate kinase, FGGY; xylulose kinase, SGX, s | 97.76 | |
| 1hux_A | 270 | Activator of (R)-2-hydroxyglutaryl-COA dehydratase | 97.63 | |
| 2p3r_A | 510 | Glycerol kinase; glycerol metabolism, allosteric r | 97.58 | |
| 4e1j_A | 520 | Glycerol kinase; structural genomics, PSI-biology, | 97.58 | |
| 2dpn_A | 495 | Glycerol kinase; thermus thermophilus HB8, structu | 97.46 | |
| 3g25_A | 501 | Glycerol kinase; IDP00743, ATP-binding, glycerol m | 97.42 | |
| 2itm_A | 484 | Xylulose kinase, xylulokinase; ATPase, FGGY kinase | 97.41 | |
| 2w40_A | 503 | Glycerol kinase, putative; closed conformation, ma | 97.41 | |
| 3h3n_X | 506 | Glycerol kinase; ATP-binding, glycerol metabolism, | 97.41 | |
| 2d4w_A | 504 | Glycerol kinase; alpha and beta protein, ribonucle | 97.4 | |
| 2zf5_O | 497 | Glycerol kinase; hyperthermophilic archaeon, ATP-b | 97.37 | |
| 3ezw_A | 526 | Glycerol kinase; glycerol metabolism, allosteric r | 97.2 | |
| 3hz6_A | 511 | Xylulokinase; xylulose, structural genomic, chromo | 97.1 | |
| 3l0q_A | 554 | Xylulose kinase; xlylulose kinase, SGX, PSI, struc | 96.99 | |
| 3ll3_A | 504 | Gluconate kinase; xylulose kinase, nysgx, ATP, ADP | 96.86 | |
| 3jvp_A | 572 | Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su | 96.85 | |
| 2uyt_A | 489 | Rhamnulokinase; rhamnose degradation, IN-LINE phos | 96.69 | |
| 3i8b_A | 515 | Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 | 96.35 | |
| 3h6e_A | 482 | Carbohydrate kinase, FGGY; novosphingobium aromati | 96.29 | |
| 3bex_A | 249 | Type III pantothenate kinase; actin-like fold, ATP | 95.91 | |
| 3djc_A | 266 | Type III pantothenate kinase; structural genomics, | 93.91 | |
| 2ych_A | 377 | Competence protein PILM; cell cycle, type IV pilus | 93.11 | |
| 2ivn_A | 330 | O-sialoglycoprotein endopeptidase; UP1 keops compl | 92.75 | |
| 2h3g_X | 268 | Biosynthetic protein; pantothenate kinase, anthrax | 92.63 | |
| 4bc3_A | 538 | Xylulose kinase; transferase, glucuronate xyluloki | 92.54 | |
| 3h1q_A | 272 | Ethanolamine utilization protein EUTJ; ethanolamin | 91.32 | |
| 4gni_A | 409 | Putative heat shock protein; HSP70-type ATPase, AT | 87.58 | |
| 4ijn_A | 398 | Acetate kinase, acetokinase; proprionate kinase, A | 87.45 | |
| 3qfu_A | 394 | 78 kDa glucose-regulated protein homolog; HSP70, K | 85.73 | |
| 3i33_A | 404 | Heat shock-related 70 kDa protein 2; protein-ADP c | 85.63 | |
| 3ezw_A | 526 | Glycerol kinase; glycerol metabolism, allosteric r | 83.09 | |
| 4a2a_A | 419 | Cell division protein FTSA, putative; cell cycle, | 82.1 |
| >3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-106 Score=838.46 Aligned_cols=413 Identities=33% Similarity=0.559 Sum_probs=372.7
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCC--CCCcceeccccccCCCCCcceeEEEEEeCCceEEEEEE
Q 012386 35 ARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112 (465)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~~--~s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V 112 (465)
+.+.+.++++.++|.++.++|++|+++|..||++||++++ +|+++||||||+++|+|+|+|.|||||||||||||++|
T Consensus 15 ~~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~~~MlPTyV~~lP~G~E~G~fLAlDlGGTNfRV~~V 94 (470)
T 3f9m_A 15 GMKKEKVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 94 (470)
T ss_dssp HHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSTTTTTTCSSCCEEEEEESSCCCCCCEEEEEEEESSSEEEEEEE
T ss_pred hhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhcccCCCCCCcccccCccccCCCCCcceEEEEEEecCceEEEEEE
Confidence 3455667777888889999999999999999999999763 48899999999999999999999999999999999999
Q ss_pred EecCCc--ceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEE
Q 012386 113 QLGGRE--GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDL 190 (465)
Q Consensus 113 ~l~g~~--~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~L 190 (465)
+|.|++ .+.++..+++|+||+++|.+++++||||||+||.+|+++++.. ++.+++|||||||++|+++++|+|
T Consensus 95 ~L~g~~~~~~~~~~~~~~~~Ip~~l~~gt~~eLFd~IA~~i~~fl~~~~~~-----~~~lpLGfTFSFP~~Q~sl~~g~L 169 (470)
T 3f9m_A 95 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMK-----HKKLPLGFTFSFPVRHEDIDKGIL 169 (470)
T ss_dssp EEEC----CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTCS-----SSCCEEEEEECSCEEEEETTEEEE
T ss_pred EECCCCCCcceEEEEEEeecCChHhccCCHHHHHHHHHHHHHHHHhhcccc-----ccccceEEEEeccccccCCCceEE
Confidence 998764 2355556678999999999999999999999999999987642 468999999999999999999999
Q ss_pred eccCCccccCCCCCCcHHHHHHHHHHHcC-CCeeEEEEEechHHHhhcccccCCceEEEEEEccccceeEEccCCCCccc
Q 012386 191 IKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKW 269 (465)
Q Consensus 191 i~wtKgF~~~~~~g~dv~~~L~~al~~~g-l~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~ 269 (465)
++|||||++++++|+||+++|+++++|+| +||+|+||+|||||||++++|.+++|.||+|+|||||+||+|+.++|++|
T Consensus 170 i~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~~~~~iGlI~GTGtNa~Y~E~~~~I~k~ 249 (470)
T 3f9m_A 170 LNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELV 249 (470)
T ss_dssp CCCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTS
T ss_pred EeccccccCCCcCCccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCCCCceEEEEEecCCceEEeeeccccccc
Confidence 99999999999999999999999999998 79999999999999999999999999999999999999999999999988
Q ss_pred CCC------------------C---------------CCCCceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCC
Q 012386 270 HGL------------------L---------------PKSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKL 316 (465)
Q Consensus 270 ~~~------------------~---------------~~~g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l 316 (465)
++. + +++|.++||||+||||||||+|++|+++.+++.||++..|++|
T Consensus 250 ~~~~~~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~~~L 329 (470)
T 3f9m_A 250 EGDEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQL 329 (470)
T ss_dssp SCCSSEEEEECCGGGTTTTSTTGGGCCHHHHHHHHHSSSTTSCHHHHTTCHHHHHHHHHHHHHHHHHTTCSGGGCCCTTT
T ss_pred cCCCCcEEEeechhhcCCCcccCCCCCcccHHHhhcCCCCCceeeccccchhhHHHHHHHHHHHHHHhCcCcCCCCcHHh
Confidence 641 0 2467779999999999999999999999999999998889999
Q ss_pred CCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCC
Q 012386 317 KIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDG 396 (465)
Q Consensus 317 ~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~ 396 (465)
.+||+|+|++||.|+.|++++ ..+..++++ +++. ++.+|++.+++||++|.+|||+|+||+|+||+++++.... .
T Consensus 330 ~~~~~l~T~~ls~ie~d~~~~-~~~~~il~~-l~~~-~~~~d~~~vr~i~~~V~~RaA~L~Aa~iaail~k~~~~~~--~ 404 (470)
T 3f9m_A 330 RTRGAFETRFVSQVESDTGDR-KQIYNILST-LGLR-PSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRESRS--E 404 (470)
T ss_dssp TSTTCSCHHHHHHHHTCCSSC-HHHHHHHHH-TTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS--C
T ss_pred cCCCCcCchHHhhhccCCCch-HHHHHHHHh-cCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--c
Confidence 999999999999999999888 888899876 8885 5569999999999999999999999999999999975211 1
Q ss_pred CCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHHHHhcccc
Q 012386 397 EKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYL 460 (465)
Q Consensus 397 ~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~Aa~~~~~~ 460 (465)
...+++|++|||+|++||.|+++++++++++++ .++|+|++++|||++|||++||++++.+
T Consensus 405 ~~~~~~VgvDGsv~~~yp~f~~~~~~~l~~l~~---~~~v~l~~a~DGSg~GAAliAa~a~~~~ 465 (470)
T 3f9m_A 405 DVMRITVGVDGSVYKLHPSFKERFHASVRRLTP---SCEITFIESEEGSGRGAALVSAVACKKA 465 (470)
T ss_dssp SSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCT---TEEEEEEECSSHHHHHHHHHHHHHTC--
T ss_pred cccceEEEEeccHHHhCchHHHHHHHHHHHHcC---CCeEEEEEcCCCcHHHHHHHHHHHHHHH
Confidence 225689999999999999999999999999984 4689999999999999999999998753
|
| >3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-103 Score=808.96 Aligned_cols=402 Identities=37% Similarity=0.578 Sum_probs=365.5
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeccccccCCCCCcceeEEEEEeCCceEEEEEEEecCCcc
Q 012386 40 ILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREG 119 (465)
Q Consensus 40 ~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~~~s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V~l~g~~~ 119 (465)
.++++.++|.++.++|++|+++|..||++||++++ |+++||||||+++|+|+|+|.|||||||||||||++|++.|+
T Consensus 5 ~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~-s~~~MlPtyv~~~P~G~E~G~~LAlDlGGTn~RV~~V~l~g~-- 81 (445)
T 3hm8_A 5 LLEETLAPFRLNHDQLAAVQAQMRKAMAKGLRGEA-SSLRMLPTFVRATPDGSERGDFLALDLGGTNFRVLLVRVTTG-- 81 (445)
T ss_dssp HHHHHHGGGSCCHHHHHHHHHHHHHHHHHHHHTSC-CSSCCEECCCCSSCCSCCCEEEEEEEESSSSEEEEEEEESSS--
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCccCCCCCCCCCCCceeeEEEEEEecCCeEEEEEEEECCc--
Confidence 45566667779999999999999999999999875 889999999999999999999999999999999999999774
Q ss_pred eeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEEeccCCcccc
Q 012386 120 RVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSI 199 (465)
Q Consensus 120 ~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li~wtKgF~~ 199 (465)
+...+++|+||+++|.+++++||||||+||.+|+++++.. ++.+|+|||||||++|+++++|+|++|||||++
T Consensus 82 --~~~~~~~~~ip~~~~~g~~~~LFd~Ia~~i~~fl~~~~~~-----~~~lplGftFSFP~~Q~sl~~g~Li~wtKGF~~ 154 (445)
T 3hm8_A 82 --VQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLS-----GQSLPLGFTFSFPCRQLGLDQGILLNWTKGFKA 154 (445)
T ss_dssp --EEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCT-----TCCCCEEEEECSCEECSSTTCCEECCCCTTCCC
T ss_pred --eEEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHHhCcc-----cccCcceEEEeeeeEeccCCceEEEEeeccccC
Confidence 3334458999999999999999999999999999987642 468999999999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHHHHHc-CCCeeEEEEEechHHHhhcccccCCceEEEEEEccccceeEEccCCCCcccCCC------
Q 012386 200 EDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGL------ 272 (465)
Q Consensus 200 ~~~~g~dv~~~L~~al~~~-gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~------ 272 (465)
++++|+||+++|+++++|+ ++||+|+||+|||||||++++|.++++.||+|+|||+|+||+|+.++|+++++.
T Consensus 155 ~~~~G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~~~~iglIlGTGtNa~y~e~~~~i~k~~~~~~~miI 234 (445)
T 3hm8_A 155 SDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPGDSGRMCI 234 (445)
T ss_dssp BTCTTSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSCCCSSEEEE
T ss_pred CCCCCCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCCCceEEEEEeCCceEEEEEecccccccCCCCCcEEE
Confidence 9999999999999999997 589999999999999999999999999999999999999999999998887541
Q ss_pred ---------------------------CCCCCceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCch
Q 012386 273 ---------------------------LPKSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTP 325 (465)
Q Consensus 273 ---------------------------~~~~g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~ 325 (465)
.+++|.++||||+||+|||||+|++++++.+++.||++..|++|.+||+|+|+
T Consensus 235 NtEwG~Fg~~~~l~~~~T~~D~~lD~~S~~PG~q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~~~L~~~~~l~T~ 314 (445)
T 3hm8_A 235 NMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLTSLGVLFRGQQIQRLQTRDIFKTK 314 (445)
T ss_dssp ECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTGGGTSHHHHHHHHHHHHHHHHHHTSSGGGCCCGGGGSTTCSCHH
T ss_pred EcchhhcCCCCCCcCCCCccchHHhcCCCCCCceEeeeecchhhHHHHHHHHHHHHHHcCCCCCCCCcHHHcCCCCCCcH
Confidence 02467779999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEE
Q 012386 326 HMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIAL 405 (465)
Q Consensus 326 ~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~i 405 (465)
+||.|+.|++ ++..+..+|++ +++ .++.+|++.+++||++|.+|||+|+|++|+||++++++... ....+++|++
T Consensus 315 ~ls~ie~D~~-~~~~~~~~l~~-l~~-~~t~~d~~~vr~i~~~V~~RaA~L~Aa~iaai~~k~~~~~~--~~~~~~~Vgv 389 (445)
T 3hm8_A 315 FLSEIESDSL-ALRQVRAILED-LGL-PLTSDDALMVLEVCQAVSQRAAQLCGAGVAAVVEKIRENRG--LEELAVSVGV 389 (445)
T ss_dssp HHHHHTCTTC-CHHHHHHHHHT-TTC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CSSEEEEEEE
T ss_pred HHHHHhcCCc-hHHHHHHHHHH-hCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--ccccCcEEEE
Confidence 9999999865 57778889976 899 78999999999999999999999999999999999964210 1124789999
Q ss_pred ecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHHHHhccc
Q 012386 406 DGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQY 459 (465)
Q Consensus 406 dGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~Aa~~~~~ 459 (465)
|||||++||.|+++++++++++.+. ++|+|.+++||||+|||++||+++|.
T Consensus 390 DGsvy~~~P~f~~~l~~~l~~l~~~---~~v~~~~s~DGSg~GAAl~AA~a~~~ 440 (445)
T 3hm8_A 390 DGTLYKLHPRFSSLVAATVRELAPR---CVVTFLQSEDGSGKGAALVTAVACRL 440 (445)
T ss_dssp ECHHHHHCTTHHHHHHHHHHHHCTT---EEEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred eceehccChhHHHHHHHHHHHhCCC---CcEEEEECCCCchHHHHHHHHHHHHH
Confidence 9999999999999999999998763 58999999999999999999999865
|
| >3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-101 Score=810.03 Aligned_cols=413 Identities=35% Similarity=0.577 Sum_probs=380.8
Q ss_pred hhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeccccccCCCCCcceeEEEEEeCCceEEEEE
Q 012386 32 GRWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLR 111 (465)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~~~s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~ 111 (465)
+.+.++.+.+++++++|.+|.++|++|+++|..||++||++++ ++++||||||+++|+|+|+|+|||||||||||||++
T Consensus 18 ~~~~~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~-~~~~MlPt~V~~lP~G~E~G~~LalDlGGTn~Rv~~ 96 (485)
T 3o8m_A 18 DVPANLMEQIHGLETLFTVSSEKMRSIVKHFISELDKGLSKKG-GNIPMIPGWVVEYPTGKETGDFLALDLGGTNLRVVL 96 (485)
T ss_dssp TSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHSSSC-CSSCCEECCCCSCCCSCCEEEEEEEEESSSEEEEEE
T ss_pred cCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCcccCCCCCCCCCCCcceEEEEEEecCCeEEEEE
Confidence 3556788899999999999999999999999999999999865 789999999999999999999999999999999999
Q ss_pred EEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEEe
Q 012386 112 VQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLI 191 (465)
Q Consensus 112 V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li 191 (465)
|+++|++. .....++|+||++++.+++++||||||+||.+|+++++.+. ..+.+++|||||||++|+++++|+|+
T Consensus 97 V~l~g~~~--~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~---~~~~l~lGftfSfP~~q~~i~~g~li 171 (485)
T 3o8m_A 97 VKLGGNHD--FDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDG---VSEPLPLGFTFSYPASQKKINSGVLQ 171 (485)
T ss_dssp EEEESSSC--EEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHHHCTTC---CSSCEEEEEEECSCEECSBTTCCEEC
T ss_pred EEECCCCc--eEEEEEEEecCchhccCCHHHHHHHHHHHHHHHHHHhcccc---cccccceEEEEeeeEEEcccCCEEEe
Confidence 99988642 22334589999999988899999999999999999876432 14679999999999999999999999
Q ss_pred ccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCCceEEEEEEccccceeEEccCCCCcccCC
Q 012386 192 KWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHG 271 (465)
Q Consensus 192 ~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~ 271 (465)
+|||||++++++|+||+++|+++++|+|+||+|+||+|||||||++++|.++++.||+|+|||+|+||+|+.++|+|+++
T Consensus 172 ~wtKGF~i~~~~G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~~~~~iglIlGTG~N~~y~e~~~~i~k~~~ 251 (485)
T 3o8m_A 172 RWTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEG 251 (485)
T ss_dssp CCCTTCCCBTCTTSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCGGGTT
T ss_pred eccccccCCCcCCccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCCCCcEEEEEEecCcceEEEeeccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998862
Q ss_pred ----CC-----------------------------------CCCCceeeeehhccccHHHHHHHHHHHHhhcccCCCCCC
Q 012386 272 ----LL-----------------------------------PKSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTV 312 (465)
Q Consensus 272 ----~~-----------------------------------~~~g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~ 312 (465)
.. +++|.++||||+||||||||+|++|+++.+++.||++..
T Consensus 252 ~~~~~~~~~~~miINtEwG~F~~~~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRlil~~l~~~~~lF~~~~ 331 (485)
T 3o8m_A 252 LLPEDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQD 331 (485)
T ss_dssp TCCTTSCTTCEEEEECCGGGTTTTCSSSCCCHHHHHHHHHSSSTTSCHHHHHHSTTTHHHHHHHHHHHHHHTTSSSTTSC
T ss_pred cccccCCCCCcEEEEcccccCCCCcccCCCCchhhHHhhcCCCCCceeeccccccchHHHHHHHHHHHHHHcCcccCCCC
Confidence 11 134556999999999999999999999999999999999
Q ss_pred CCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 012386 313 PPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDT 392 (465)
Q Consensus 313 ~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~ 392 (465)
|++|.+||+|+|++||.|+.|+++++..+..+|++.|+++ ++.+|++.+++||++|.+|||+|+|++|+||++++++
T Consensus 332 ~~~L~~~~~l~T~~ls~i~~d~~~~l~~~~~~l~~~l~~~-~t~~d~~~vr~i~~~V~~RAA~L~Aa~iaail~~~~~-- 408 (485)
T 3o8m_A 332 ISKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFKTNLNIE-TTVVERKLIRKLAELVGTRAARLTVCGVSAICDKRGY-- 408 (485)
T ss_dssp CGGGGSTTCSCTHHHHHHHHCCCTTCHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred cHHhcCCCCcCcHHHHHHHcCCcchHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--
Confidence 9999999999999999999999999999999999999995 8889999999999999999999999999999999998
Q ss_pred cCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCC----CccEEEEEeCChhHHHHHHHHHHhccc
Q 012386 393 VRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEV----SETVVIEHSNDGSGIGAALLAASHSQY 459 (465)
Q Consensus 393 ~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~----~~~v~l~~a~Dgs~iGAAl~Aa~~~~~ 459 (465)
+.++|++|||+|++||.|+++++++++++++... .++|+|.+++|||++|||++||++++.
T Consensus 409 ------~~~~VgvdGSv~~~~P~f~~~~~~~l~~ll~~~~~~~~~~~v~l~~a~DGSg~GAAliAa~a~~~ 473 (485)
T 3o8m_A 409 ------KTAHIAADGSVFNRYPGYKEKAAQALKDIYNWDVEKMEDHPIQLVAAEDGSGVGAAIIACLTQKR 473 (485)
T ss_dssp ------SSEEEEEESHHHHHSTTHHHHHHHHHHHHHTCCCCSGGGCSEEEEECCCTTTHHHHHHHHHHHHH
T ss_pred ------CceEEEEecChhccCccHHHHHHHHHHHHhccccccCCCceEEEEEcCCChHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999987432 468999999999999999999999865
|
| >1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-93 Score=749.86 Aligned_cols=409 Identities=34% Similarity=0.569 Sum_probs=372.2
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcC--CCCCCcceeccccccCCCCCcceeEEEEEeCCceEEEEE
Q 012386 34 WARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLAS--EGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLR 111 (465)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~--~~~s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~ 111 (465)
.+.+.+.+++|+++|.++.++|++|+++|..||++||++ ++.|+++||||||+++|+|+|+|+|||||||||||||++
T Consensus 5 ~~~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~ 84 (451)
T 1bdg_A 5 DQQLFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLS 84 (451)
T ss_dssp HHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSCCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEE
T ss_pred hHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcccCCCCCcccccccccCCCCCCCccceEEEEEeCCCeEEEEE
Confidence 345667889999999999999999999999999999984 335899999999999999999999999999999999999
Q ss_pred EEecC-CcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEE
Q 012386 112 VQLGG-REGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDL 190 (465)
Q Consensus 112 V~l~g-~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~L 190 (465)
|+++| ++. .....++|+||++++.+++++||||||+||++|+++++.. .+.+++|||||||++|+++++|+|
T Consensus 85 V~l~G~~~~--~~i~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~~~lG~tfsfPv~q~~~~~G~l 157 (451)
T 1bdg_A 85 VTLEGKGKS--PRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMK-----DKKFDLGFTFSFPCVQKGLTHATL 157 (451)
T ss_dssp EEECC-CCC--CEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCC-----SSCEEEEEEECSCEEEETTTEEEE
T ss_pred EecCCCCcc--eEEEEEEEecCCcccCCCHHHHHHHHHHHHHHHHHhcCCC-----ccccceEEEEeeEeccccCCCeEE
Confidence 99988 432 2222358999999888999999999999999999987642 346999999999999999999999
Q ss_pred eccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCCceEEEEEEccccceeEEccCCCCcccC
Q 012386 191 IKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWH 270 (465)
Q Consensus 191 i~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~ 270 (465)
++|||||++++++|+||+++|+++++|+|+||+|++|+||||||+++++|.++++.||+|+|||+|+||+++++.|+|++
T Consensus 158 ~~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~~~~~iglIlGTG~na~yve~~~~i~~~~ 237 (451)
T 1bdg_A 158 VRWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMD 237 (451)
T ss_dssp CCCCTTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCGGGC
T ss_pred eccccccCCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccCCCcEEEEEEeCCcceEEEEcCccccCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred CC-------------C--------C-------------CCCceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCC
Q 012386 271 GL-------------L--------P-------------KSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKL 316 (465)
Q Consensus 271 ~~-------------~--------~-------------~~g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l 316 (465)
+. + | ++|.+|||||+||+|||||+|+++.++.+++.+|.+..|+.|
T Consensus 238 g~~~g~m~In~EwG~f~~~~~~~~p~t~~D~~lD~~s~~pg~q~~Ek~~SG~yLgel~R~~l~~~~~~~~lf~~~~~~~l 317 (451)
T 1bdg_A 238 GVKEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPERL 317 (451)
T ss_dssp SCSSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCSGG
T ss_pred CCccCcEEEecCcccCCCcccccCCCCcchhhhhhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccccccchHhh
Confidence 51 1 0 125569999999999999999999999998899998889999
Q ss_pred CCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCC
Q 012386 317 KIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDG 396 (465)
Q Consensus 317 ~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~ 396 (465)
..++.|+|++||.|++|+++++..++.+++..++++.++.+|++.++++|+.|++|+|+++|++|+++++++++
T Consensus 318 ~~~~~l~t~~ls~i~~d~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~va~~V~~RaA~lla~~ia~i~~~~~~------ 391 (451)
T 1bdg_A 318 KVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACEMVVKRAAYLAGAGIACILRRINR------ 391 (451)
T ss_dssp GSTTCSCTTHHHHHTTCCTTCCHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------
T ss_pred cCCCccchHHHhhhhccCccchHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------
Confidence 99999999999999999999999999999987888666899999999999999999999999999999999998
Q ss_pred CCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHHHHhccc
Q 012386 397 EKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQY 459 (465)
Q Consensus 397 ~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~Aa~~~~~ 459 (465)
++++|++|||+|++||.|++++++++++++++ ..+|++.+++|||++|||++|+++++.
T Consensus 392 --~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~--~~~i~~~l~~dgs~iGAAllA~~~~~~ 450 (451)
T 1bdg_A 392 --SEVTVGVDGSLYKFHPKFCERMTDMVDKLKPK--NTRFCLRLSEDGSGKGAAAIAASCTRQ 450 (451)
T ss_dssp --SEEEEEEESHHHHHCTTHHHHHHHHHHHHSCT--TCEEEEEECTTHHHHHHHHHHTTC---
T ss_pred --CceEEEEeCchhcCchhHHHHHHHHHHHHhCC--CCcEEEEECCCccHHHHHHHHHHHhhc
Confidence 57899999999999999999999999999876 468999999999999999999888753
|
| >2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-90 Score=721.96 Aligned_cols=401 Identities=20% Similarity=0.259 Sum_probs=364.6
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeccccccCCCCCcceeEEEEEeCCceEEEEEEEecCC
Q 012386 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGR 117 (465)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~~~s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V~l~g~ 117 (465)
.+.+++|.++|.+|.++|++|+++|..||+ ||++++ |+++||||||+++|+|+|+|+||||||||||||+++|+++|+
T Consensus 6 ~~~~~~~~~~f~~~~~~L~~i~~~~~~em~-gL~~~~-~~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lV~~~G~ 83 (457)
T 2yhx_A 6 XSLVEVHXXVFIVPPXILQAVVSILTTRXD-DXDSSA-ASIPMVPGWVLKQVSGAQAGSFLAIVMGGGDLEVILISLAGR 83 (457)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-HHHSSS-CSSCCEECCCCCCCCSCCCEEEEEEEECSSEEEEEEEEEETT
T ss_pred HHHHHHHHhhhcCCHHHHHHHHHHHHHHhc-CCCCCC-CCCccCccccCCCCCCCccceEEEEEeCCCeEEEEEEEeCCC
Confidence 356778888889999999999999999999 998754 789999999999999999999999999999999999999886
Q ss_pred cceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEEeccCCcc
Q 012386 118 EGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGF 197 (465)
Q Consensus 118 ~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li~wtKgF 197 (465)
.. .+...+++++|++.+.++++++||||+++|++|+++++.. ..+.+++|||||||++|.++++|+|++|+|||
T Consensus 84 ~~--~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~----~~~~~~lGi~fs~P~~q~~~~~g~l~~wtKgf 157 (457)
T 2yhx_A 84 QE--SSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSS----XAGSVPLGFTFXEAGAKEXVIKGQITXQAXAF 157 (457)
T ss_dssp EE--EEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSS----CSSCEEEEEECCSCCCCSBTTCCBCSSCCTTC
T ss_pred ee--EEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHhhcccc----cccccceeeEEEEEEEEeecCceEEEeeccCC
Confidence 31 2233458999998888899999999999999999876532 13567999999999999999999998999999
Q ss_pred ccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCCceEEEEEEccccceeEEccCCCCcccC-------
Q 012386 198 SIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWH------- 270 (465)
Q Consensus 198 ~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~------- 270 (465)
++++++ ||+++|+++++|+|+|++|++|+||||+|+++++|.++++.||+|+|||+|+||+++.++|++++
T Consensus 158 ~i~~~~--~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~~~~~iglilGTGvgg~~i~~~~~i~kl~~~~~~~~ 235 (457)
T 2yhx_A 158 SLAXLX--KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGXXGG 235 (457)
T ss_dssp CCSSCS--SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEECGGGSSCTTSCSSSCS
T ss_pred CcchhH--HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcCCccEEEEEECcEEEEEEEECCCccccccccccccc
Confidence 999998 99999999999999999999999999999999999999999999999999999999999888872
Q ss_pred -CC---------C--------------------CCCCceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCC
Q 012386 271 -GL---------L--------------------PKSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPF 320 (465)
Q Consensus 271 -~~---------~--------------------~~~g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~ 320 (465)
+. + ..+| +|||||+||+|||||+|+++.++.+++.+|.+ .|++|..+|
T Consensus 236 ~g~~~in~EwG~f~~~~~~lp~t~~D~~lD~~s~~pG-q~fEkm~SG~yLGel~R~il~~~~~~~~lf~~-~~~~l~~~~ 313 (457)
T 2yhx_A 236 AGXMXICCDQSSFRKAFPSLPQIXYLXTLNXXSPXAX-KTFXKNSXAKNXGQSLRDVLMXFKXXGQXHXX-XAXSFXAAN 313 (457)
T ss_dssp SCCEEEECCCTTTTTTCSSSCCCHHHHHHHHHSSCSC-CHHHHHHCGGGHHHHHHHHHHHHHHTTSSSSS-CCCSCCSTT
T ss_pred CCceEEEEEcccCCCCCCcCCccccccccccccCchH-HHHHHHhhhcCcHHHHHHHHHHHhcccccccc-cchhccccc
Confidence 10 1 1245 69999999999999999999999999999998 899999999
Q ss_pred ccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCce
Q 012386 321 ILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQK 400 (465)
Q Consensus 321 ~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~ 400 (465)
+|+|++||.++.|+++++..++.+|.+.++++ .+.+|++.++++|+.|++|+|+|+|++|++|++++++ ++
T Consensus 314 ~~~t~~ls~i~~d~~~~l~~~~~il~~~~~~~-~t~~D~~~v~~ia~~V~~RaA~l~A~~iaai~~~~~~--------~~ 384 (457)
T 2yhx_A 314 VENTSYPAKIQKLPHFDLRXXXDLFXGDQGIA-XKTXMKXVVRRXLFLIAAYAFRLVVCXIXAICQKKGY--------SS 384 (457)
T ss_dssp CSCTHHHHHHHHCCSSSCHHHHHHHHHHHTCC-CCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTC--------SS
T ss_pred CcChHHHHHHhcCCchhhhHHHHHHHHHhCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC--------Cc
Confidence 99999999999999889988999997879985 5999999999999999999999999999999999998 46
Q ss_pred EEEEEecceeccchhHHHHHHHHHHHHhccCC----CccEEEEEeCChhHHHHHHHHHHhcccc
Q 012386 401 SVIALDGGLFEHYTKFSACMQSTVKELLGEEV----SETVVIEHSNDGSGIGAALLAASHSQYL 460 (465)
Q Consensus 401 ~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~----~~~v~l~~a~Dgs~iGAAl~Aa~~~~~~ 460 (465)
++|++|||+ ++||.|++++++++++++++.. ..+|+|++++|||++|||++||+++++.
T Consensus 385 ~~V~vdGsv-~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~dgsg~GAAl~aa~~~~~~ 447 (457)
T 2yhx_A 385 GHIAAXGSX-RSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAIDGXGAASXVIXSIASAXX 447 (457)
T ss_dssp EEEEEESTT-TTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCCTTTHHHHHHHHHHHHHH
T ss_pred EEEEEECCc-ccCchHHHHHHHHHHHhhCcccccccCcceEEEECCCchhhhHHHHHHHHhhhh
Confidence 799999999 9999999999999999987643 4689999999999999999999999874
|
| >1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-87 Score=757.00 Aligned_cols=409 Identities=37% Similarity=0.565 Sum_probs=364.9
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC--CCCCcceeccccccCCCCCcceeEEEEEeCCceEEEEEEEecC
Q 012386 39 AILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE--GGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGG 116 (465)
Q Consensus 39 ~~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~--~~s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V~l~g 116 (465)
+.++++.++|.++.++|++|+++|..||++||+++ +.|+++||||||+++|||+|+|+|||||||||||||++|++.+
T Consensus 468 ~~i~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~~~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V~l~~ 547 (917)
T 1cza_N 468 RQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRS 547 (917)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSSCCEECSCCSCCCSCCCEEEEEEEESSSSEEEEEEEEEC
T ss_pred hhHHHHHhhhcCCHHHHHHHHHHHHHHHHHHhcccCCCCCCCceECCCCCCCCCCCcceEEEEEEECCCcEEEEEEEeCC
Confidence 34567777788999999999999999999999854 3588999999999999999999999999999999999999974
Q ss_pred CcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEEeccCCc
Q 012386 117 REGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKG 196 (465)
Q Consensus 117 ~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li~wtKg 196 (465)
.+.+++...+++|+||++++.+++++||||||+||.+|+++++.. .+.+++|||||||++|+++++++|++||||
T Consensus 548 g~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~l~lG~tfsfPv~q~~i~~~~L~~WtKg 622 (917)
T 1cza_N 548 GKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIK-----GPRMPLGFTFSFPCQQTSLDAGILITWTKG 622 (917)
T ss_dssp STTCEEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCC-----SSCCEEEEEECSCEEEEETTEEEECCCCTT
T ss_pred CcceeEEeeeeEEecCcccccCCHHHHHHHHHHHHHHHHHHcCCC-----ccceeEEEEeeccccccccCccEECceecc
Confidence 332356555668999999888899999999999999999987642 346799999999999999999999999999
Q ss_pred cccCCCCCCcHHHHHHHHHHHc-CCCeeEEEEEechHHHhhcccccCCceEEEEEEccccceeEEccCCCCcccCCCC--
Q 012386 197 FSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLL-- 273 (465)
Q Consensus 197 F~~~~~~g~dv~~~L~~al~~~-gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~-- 273 (465)
|++++++|+||+++|+++++|+ ++||++++|+||||||+++++|.++++.||+|+|||+|+||+++.+.|++++++.
T Consensus 623 f~~~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~~~~~iglIlGTG~na~y~e~~~~i~~~~g~~g~ 702 (917)
T 1cza_N 623 FKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQGQ 702 (917)
T ss_dssp CCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCTTSSCCSSE
T ss_pred cccCCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCCCCcEEEEEEeCCeeEEEEEcCccccCcCCCcCc
Confidence 9999999999999999999887 7999999999999999999999999999999999999999999999988876521
Q ss_pred -------------------------------CCCCceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCcc
Q 012386 274 -------------------------------PKSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFIL 322 (465)
Q Consensus 274 -------------------------------~~~g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l 322 (465)
+++|.+|||||+||+|||||+|+++.++.+++.+|.+..|+.|.+++.|
T Consensus 703 m~In~EwG~fg~~~~l~~~~T~~D~~~d~~s~~pG~q~~Ek~~SG~yLgel~R~il~~~~~~~~lf~~~~~~~l~~~~~~ 782 (917)
T 1cza_N 703 MCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIF 782 (917)
T ss_dssp EEEECCGGGTTTTSTTTTTCCHHHHHHHHTSTTTTSCTTGGGTSTTTHHHHHHHHHHHHHHTTSSGGGCCCTTTTSTTCS
T ss_pred EEEecccccCCCcccccCCCCchhhhhhhcCCCCCCCchHHhhhHhHHHHHHHHHHHHhcccccccccccchhhccCCcc
Confidence 1245679999999999999999999999998999998889999999999
Q ss_pred CchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEE
Q 012386 323 RTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSV 402 (465)
Q Consensus 323 ~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~ 402 (465)
+|++||.|+.|.+ ++..+..+++. +++ .++.+|++.++++|+.|++|+|+|+|++|++++++++++.. ....+++
T Consensus 783 ~t~~ls~ie~d~~-~~~~~~~i~~~-~~~-~~~~~D~~~~~~ia~~v~~RaA~l~a~~iaai~~~~~~~~~--~~~~~~~ 857 (917)
T 1cza_N 783 ETKFLSQIESDRL-ALLQVRAILQQ-LGL-NSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRG--LDRLNVT 857 (917)
T ss_dssp CHHHHHHHTCSSC-CHHHHHHHHHH-HTC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CSSEEEE
T ss_pred chHHhhhhhcCcc-hhhHHHHHHHH-hCC-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc--cCccceE
Confidence 9999999999987 46677888875 777 57899999999999999999999999999999999976211 1113478
Q ss_pred EEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHHHHhcccc
Q 012386 403 IALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQYL 460 (465)
Q Consensus 403 V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~Aa~~~~~~ 460 (465)
|++|||||++||.|+++++++++++.+ .++|+|++++|||++|||++||++++.+
T Consensus 858 V~vdGsv~~~~p~f~~~~~~~l~~l~~---~~~v~~~~~~dgsg~GAAl~aa~~~~~~ 912 (917)
T 1cza_N 858 VGVDGTLYKLHPHFSRIMHQTVKELSP---KCNVSFLLSEDGSGKGAALITAVGVRLR 912 (917)
T ss_dssp EEEECHHHHHCTTHHHHHHHHHHHHST---TEEEEEEECSSCSHHHHHHHHHHHHHHH
T ss_pred EEECCHHHHcCcHHHHHHHHHHHHhCC---CCceEEEEecCChHHHHHHHHHHHHHHH
Confidence 999999999999999999999999864 2579999999999999999999998764
|
| >1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-77 Score=676.44 Aligned_cols=409 Identities=34% Similarity=0.540 Sum_probs=359.1
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCC--CCCcceeccccccCCCCCcceeEEEEEeCCceEEEEEEE
Q 012386 36 RAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQ 113 (465)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~~--~s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V~ 113 (465)
.+.+.+++|.++|.+|.++|++|+++|..||++||++++ .|+++||||||+++|+|+|+|+||||||||||||+++|+
T Consensus 17 ~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lv~ 96 (917)
T 1cza_N 17 DQVKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQ 96 (917)
T ss_dssp HHHHHHHHHTGGGSCCHHHHHHHHHHHHHHHHHHHCTTTGGGCSSCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCCCCCCcccccccccCCCCCCCCcceEEEEEeCCCeEEEEEEE
Confidence 344567888889999999999999999999999998754 478999999999999999999999999999999999999
Q ss_pred ecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEEecc
Q 012386 114 LGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKW 193 (465)
Q Consensus 114 l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li~w 193 (465)
++|++...++...+++++|++++.++++++|+||+++|++|+++++.. .+.+++|||||||++|+++++|+|++|
T Consensus 97 ~~G~~~~~i~~~~~~~~ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~-----~~~~~lGi~fs~P~~q~~~~~G~l~~w 171 (917)
T 1cza_N 97 VNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGFTFSFPCQQSKIDEAILITW 171 (917)
T ss_dssp EEEETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCT-----TSCCCEEEEECSCEECSSTTCCEECCC
T ss_pred ecCCCcceEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHhcCCC-----CCcccEEEEEccccccCcCCceEEEec
Confidence 987532333233457899987777789999999999999999887532 235699999999999999999999999
Q ss_pred CCccccCCCCCCcHHHHHHHHHHHcC-CCeeEEEEEechHHHhhcccccCCceEEEEEEccccceeEEccCCCCcccCCC
Q 012386 194 TKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGL 272 (465)
Q Consensus 194 tKgF~~~~~~g~dv~~~L~~al~~~g-l~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~ 272 (465)
||||++++++|+||+++|+++++|+| +|+++++|+||||||+++++|.++++.||+|+|||+|+||++++++|+++.+.
T Consensus 172 tkgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~~~~~iglilGTGvngg~i~~g~~i~~~~G~ 251 (917)
T 1cza_N 172 TKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGD 251 (917)
T ss_dssp CTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCTTSSCC
T ss_pred ccCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccCCCcEEEEEEECCcceEEEecCcccccccCC
Confidence 99999999999999999999999987 89999999999999999999999999999999999999999999966655442
Q ss_pred ------------CC---------------------CCCceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCC
Q 012386 273 ------------LP---------------------KSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIP 319 (465)
Q Consensus 273 ------------~~---------------------~~g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~ 319 (465)
+. .+|.+|||||+||+||||++|+++.++.+++.+|.+..|+.|..+
T Consensus 252 ~g~~~in~E~G~f~~~~~l~~~~t~~D~~~dc~~g~pg~g~~Ek~~SG~yLgel~r~~l~~~~~~~~~~~~~~~~~l~~~ 331 (917)
T 1cza_N 252 EGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTR 331 (917)
T ss_dssp SSEEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCTTTTST
T ss_pred CCceEEeccccccCCccccccCCCccccccccCCcCCCccHhHHHhhhhhHHHHHHHHHHHhhccccccccccchhhccc
Confidence 10 123469999999999999999999999888888887778888888
Q ss_pred CccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCcCCCC
Q 012386 320 FILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKL--GRDTVRDGE 397 (465)
Q Consensus 320 ~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~--~~~~~~~~~ 397 (465)
+.+++++++.++ +.++++..+..+++. +++ .++..|++.++++|..|++|+|+++|++|++|++++ +|.. .
T Consensus 332 ~~l~t~~vs~~~-~~~~~~~~~~~i~~~-~~~-~~~~~D~~~~~~~a~~v~~raa~llA~gia~ii~~l~~dp~~----~ 404 (917)
T 1cza_N 332 GKFNTSDVSAIE-KNKEGLHNAKEILTR-LGV-EPSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKGT----P 404 (917)
T ss_dssp TSSCHHHHHHHT-CTTTHHHHHHHHHHH-TTC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----S
T ss_pred cccChHHHHHHh-cccccHHHHHHHHHH-hCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc----c
Confidence 999999999998 557788888888876 777 478999999999999999999999999999999999 6621 1
Q ss_pred CceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHHHHhccc
Q 012386 398 KQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHSQY 459 (465)
Q Consensus 398 ~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~Aa~~~~~ 459 (465)
.++.+|++||||+++||.|+++++++++++++. ..++|++++|||++|||++||++++.
T Consensus 405 ~~~~~IvigGgV~~~~~~~~~~l~~~l~~~~~~---~~~~i~~a~dgs~~GAA~laa~~~~l 463 (917)
T 1cza_N 405 RLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPD---SDVRFLLSESGSGKGAAMVTAVAYRL 463 (917)
T ss_dssp SEEEEEEEECHHHHHCSSHHHHHHHHHHHHCTT---EEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred CcceEEEECCchhhccHHHHHHHHHHHHHhcCC---CceEEEEeccchHHHHHHHHHhHhhh
Confidence 134689999999999999999999999998732 57999999999999999999998865
|
| >3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5e-27 Score=235.85 Aligned_cols=284 Identities=18% Similarity=0.213 Sum_probs=209.3
Q ss_pred eeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeee
Q 012386 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (465)
Q Consensus 95 G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~ 174 (465)
+++|+||+|||++|++++++.|+ ++.+. +++.| .+.+++++.|++.|.+++++ .+...+|+
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~---i~~~~--~~~~~-----~~~~~~~~~i~~~i~~~~~~---------~~i~gigi 62 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGR---ILSTF--KVATP-----PTAEGIVDAICAAVAGASEG---------HDVEAVGI 62 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCC---BCCCE--EEECC-----SSHHHHHHHHHHHHHHHHTT---------CCEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCC---EEEEE--EeeCC-----CCHHHHHHHHHHHHHHHHhh---------cCceEEEE
Confidence 47899999999999999999885 55433 34443 35789999999999998753 24788999
Q ss_pred eeeccccccc--CCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCceEEE
Q 012386 175 TFSFPVRQTS--IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAA 248 (465)
Q Consensus 175 tfSfPv~q~~--i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~~~ig 248 (465)
++|+|++... +.....+.|. +.|+.+.|++.+ ++|| .+.||++++++++.+. +.++.+.
T Consensus 63 ~~pG~vd~~~g~v~~~~~l~w~---------~~~l~~~l~~~~---~~pv---~v~NDa~aaal~E~~~g~~~~~~~~~~ 127 (321)
T 3vgl_A 63 GAAGYVDDKRATVLFAPNIDWR---------HEPLKDKVEQRV---GLPV---VVENDANAAAWGEYRFGAGQGHDDVIC 127 (321)
T ss_dssp EESSEECTTSSCEEECSSSCCE---------EECHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHSTTTTCSSEEE
T ss_pred eccccEeCCCCEEEeCCCCCCc---------CCCHHHHHhhhh---CCCE---EEEehhhhHHHHHHHhCCCCCCCCEEE
Confidence 9999997531 2222222554 689999999999 8996 9999999999999874 5689999
Q ss_pred EEEccccceeEEccCCCCcccCCC--------CCCCCc------e-eeeehhccccHHHHHHHHHHHHhhcccCCCCCCC
Q 012386 249 VILGTGTNAAYVERAHAIPKWHGL--------LPKSGE------M-IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVP 313 (465)
Q Consensus 249 lIlGTG~Na~yie~~~~i~k~~~~--------~~~~g~------~-~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~ 313 (465)
+++|||++++++.+++.+.++++. +++.|. . |+|.++|+..|-+..+...... |
T Consensus 128 l~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~~g~~c~cG~~gclE~~~S~~al~~~~~~~~~~~-----------~ 196 (321)
T 3vgl_A 128 ITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAKQRANAT-----------P 196 (321)
T ss_dssp EEESSSEEEEEEETTEECCCTTSCCCCGGGSBSSTTCSBCTTSCBSBGGGTSSHHHHHHHHHHHHHHC-----------G
T ss_pred EEeCcceEEEEEECCEEecCCCCCCccccceEecCCCCCCCCCCcCcHHHhcCHHHHHHHHHHHhhcC-----------C
Confidence 999999999999999888776542 122222 2 9999999999966555443321 0
Q ss_pred CCCCCCCccCchhhhhc-ccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 012386 314 PKLKIPFILRTPHMSAM-HHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDT 392 (465)
Q Consensus 314 ~~l~~~~~l~t~~ls~i-~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~ 392 (465)
.. +..+... ..+. ... ....+++. ++.++..|..+++++++++|.+|+++++.++|
T Consensus 197 ~~--------~~~~~~~~~~~~-~~~-~~~~i~~~-----------a~~gD~~a~~~~~~~~~~La~~i~~l~~~l~p-- 253 (321)
T 3vgl_A 197 EN--------AAVLLGLGDGSV-DGI-EGKHISEA-----------ARQGDPVAVDSFRELARWAGAGLADLASLFDP-- 253 (321)
T ss_dssp GG--------CHHHHHTTTSSS-TTC-CHHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred cc--------hhhhhhcccCcc-ccC-CHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCC--
Confidence 00 0000000 0000 000 12333333 66778999999999999999999999999999
Q ss_pred cCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhc-cCCCccEEEEEe---CChhHHHHHHHHH
Q 012386 393 VRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLG-EEVSETVVIEHS---NDGSGIGAALLAA 454 (465)
Q Consensus 393 ~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~-~~~~~~v~l~~a---~Dgs~iGAAl~Aa 454 (465)
+ .|.++|++....+.|.+.+++.+++... +.....+.|+.+ +|++.+|||.++.
T Consensus 254 ------~--~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~~ 311 (321)
T 3vgl_A 254 ------S--AFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLAR 311 (321)
T ss_dssp ------S--EEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHHH
T ss_pred ------C--EEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHHH
Confidence 4 6889999999999999999999998765 333446777776 8999999998764
|
| >1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-26 Score=240.63 Aligned_cols=328 Identities=15% Similarity=0.165 Sum_probs=230.4
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCC-------CCcceeccccccCCCCCcceeEEEEEeCCceEEEEEEEec
Q 012386 43 EMEEKCGTPIGKLRQVADAMTVEMHAGLASEGG-------SKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLG 115 (465)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~~~-------s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V~l~ 115 (465)
++.+.+.++...+.++.++|.+ +||-.+.+ ..-+.+.++. | +.+++|+||+|||++|++++++.
T Consensus 58 ela~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~s~~GR~~~~l~~~---~---~~~~~lGIDiGgt~i~~~l~d~~ 128 (429)
T 1z05_A 58 DLSKESELAPASITKITRELID---AHLIHETTVQEAISRGRPAVGLQTN---N---LGWQFLSMRLGRGYLTIALHELG 128 (429)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---TTSEEEECHHHHHHHTSCCEEEEEC---C---TTEEEEEEEEETTEEEEEEEETT
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCCEEeccccCCCCCCCCCeEEEEC---C---CCCEEEEEEECCCEEEEEEECCC
Confidence 3444556777777778777766 56633211 0112233332 2 35789999999999999999998
Q ss_pred CCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEEeccCC
Q 012386 116 GREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 195 (465)
Q Consensus 116 g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li~wtK 195 (465)
|+ ++.+. .++.|. .+.+++++.|++.|.+++++.+... .+...+|+++|+|++.. .+.++ |..
T Consensus 129 G~---il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~gigi~~pG~vd~~---~g~v~-~~~ 191 (429)
T 1z05_A 129 GE---VLIDT--KIDIHE----IDQDDVLARLLFEIEEFFQTYAAQL----DRVTSIAITLPGLVNSE---QGIVL-QMP 191 (429)
T ss_dssp SC---EEEEE--EEECCC----CBHHHHHHHHHHHHHHHHHHTTTTC----CEEEEEEEEESSEEETT---TTEEE-ECS
T ss_pred CC---EEEEE--EEcCCC----CCHHHHHHHHHHHHHHHHHhcCCCc----CceEEEEEeccCcEeCC---CCeEe-ecC
Confidence 84 66543 455543 2478999999999999998765321 45789999999999753 23332 111
Q ss_pred ccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCceEEEEEEccccceeEEccCCCCcccCC
Q 012386 196 GFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTGTNAAYVERAHAIPKWHG 271 (465)
Q Consensus 196 gF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIlGTG~Na~yie~~~~i~k~~~ 271 (465)
++ +|.+.|+.+.|++.+ ++|| .|.||++++++++.+. +.++.+.+++|||++++++.+++.+.+.++
T Consensus 192 --~l-~w~~~~l~~~L~~~~---~~pV---~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g 262 (429)
T 1z05_A 192 --HY-NVKNLALGPEIYKAT---GLPV---FVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHG 262 (429)
T ss_dssp --SS-BCSSBCHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEECCTTTT
T ss_pred --CC-CCCCCCHHHHHHHHh---CCCE---EEechhHHHHHHHHHhCCCCCCCcEEEEEECCcEEEEEEECCEEeeCCCC
Confidence 11 134799999999999 9996 9999999999999864 568999999999999999999887776543
Q ss_pred ---C-----CCCC------Cce-eeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCc
Q 012386 272 ---L-----LPKS------GEM-IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSP 336 (465)
Q Consensus 272 ---~-----~~~~------g~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~ 336 (465)
+ +++. |.. |+|.++|+..|-+.++..+ ... . ++.+.. ....
T Consensus 263 ~AGEiGH~~v~~~g~~c~cG~~gclE~~~S~~al~~~~~~~~---~~~------~-~~~l~~--------------~~~~ 318 (429)
T 1z05_A 263 NIGELGHIQIDPQGKRCHCGNYGCLETVASSQAIRDQVTARI---QAG------E-PSCLAT--------------VEEI 318 (429)
T ss_dssp CTTBCTTSBCCTTCCBCTTSCBSBTHHHHSHHHHHHHHHHHH---HTT------C-CCTTTT--------------CSSC
T ss_pred cccccCceEEcCCCCCCCCCCCcchHHHhCHHHHHHHHHHHh---hcc------c-cccccc--------------ccCC
Confidence 1 1222 222 9999999998855443321 110 0 111100 0001
Q ss_pred CHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhH
Q 012386 337 DLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKF 416 (465)
Q Consensus 337 ~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f 416 (465)
+ ...+++. ++.++..|..+++++++++|.+|+++++.++| + .|+++|++....+.|
T Consensus 319 ~---~~~i~~~-----------a~~gD~~a~~il~~~~~~L~~~i~~l~~~ldP--------~--~IvlgG~i~~~~~~l 374 (429)
T 1z05_A 319 S---IEDICAA-----------AADGDPLAVDVIQQLGRYLGAAIAIVINLFNP--------E--KILIGGVINQAKSIL 374 (429)
T ss_dssp C---HHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------S--EEEEESGGGGGHHHH
T ss_pred C---HHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC--------C--EEEEeCccccchHHH
Confidence 1 2233333 56778899999999999999999999999999 4 688999999999999
Q ss_pred HHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHHHHH
Q 012386 417 SACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLAA 454 (465)
Q Consensus 417 ~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~Aa 454 (465)
.+.+++.+++...+.....+.|..+ +| +.+|||.++.
T Consensus 375 ~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~~ 414 (429)
T 1z05_A 375 YPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALIK 414 (429)
T ss_dssp HHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHHH
T ss_pred HHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHHHHHH
Confidence 9999999988743211224566665 77 9999998864
|
| >2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.1e-27 Score=233.77 Aligned_cols=292 Identities=17% Similarity=0.185 Sum_probs=209.1
Q ss_pred eeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeee
Q 012386 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (465)
Q Consensus 95 G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~ 174 (465)
+++|+||+|||++|++++++.|+ ++.+. +++.|.. .+.+++++.+.+.|.+++++.+... .+...+|+
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~~igi 73 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGV---VQQKW--SIETNIL---EDGKHIVPSIIESIRHRIDLYNMKK----EDFVGIGM 73 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCCT---TTTTTHHHHHHHHHHHHHHHTTCCG----GGEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCC---EEEEE--EEcCCCC---CCHHHHHHHHHHHHHHHHHHcCCCc----cceeEEEE
Confidence 58999999999999999999884 66543 4555543 3578899999999999998765321 35788999
Q ss_pred eeecccccccCCceEEeccCCccccCCCCCC-cHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCceEEEE
Q 012386 175 TFSFPVRQTSIASGDLIKWTKGFSIEDTVGE-DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAV 249 (465)
Q Consensus 175 tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~-dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~~~igl 249 (465)
++|+|++.. ++.++. +. ++ ++.+. |+.+.|++.+ ++|| .+.||+++++++++|. +.++.+.+
T Consensus 74 ~~pG~vd~~---~g~v~~-~~--~l-~w~~~~~l~~~l~~~~---~~pv---~v~ND~~aaa~~e~~~g~~~~~~~~~~l 140 (326)
T 2qm1_A 74 GTPGSVDIE---KGTVVG-AY--NL-NWTTVQPVKEQIESAL---GIPF---ALDNDANVAALGERWKGAGENNPDVIFI 140 (326)
T ss_dssp EESSEEETT---TTEEEC-BG--GG-TBCSCBCHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHSTTTTCSCEEEE
T ss_pred ecccceeCC---CCEEEe-cC--CC-CccCCchHHHHHHHHh---CCCE---EEecHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 999999752 233321 11 11 23368 9999999999 8996 8999999999999864 46789999
Q ss_pred EEccccceeEEccCCCCcccCC---C-----CCCCC------c-eeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCC
Q 012386 250 ILGTGTNAAYVERAHAIPKWHG---L-----LPKSG------E-MIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPP 314 (465)
Q Consensus 250 IlGTG~Na~yie~~~~i~k~~~---~-----~~~~g------~-~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~ 314 (465)
++|||++++++.+++.+.+.++ + +++.| . -|+|.++|+.+|-+.++..+ .. ...+.
T Consensus 141 ~~GtGiG~giv~~G~l~~G~~g~aGE~Gh~~~~~~g~~c~cG~~gcle~~~s~~~l~~~~~~~~---~~------~~~~~ 211 (326)
T 2qm1_A 141 TLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPNGFDCTCGKRGCLETVSSATGVVRVARHLS---EE------FAGDS 211 (326)
T ss_dssp EESSSEEEEEEETTEECCCSSSCTTCGGGSBSCTTSCBCTTSSBCBTHHHHSHHHHHHHHHHHT---TT------CCSCC
T ss_pred EECCceEEEEEECCEEeecCCCcccccCcEEECCCCCcCCCCCccchHhhhCHHHHHHHHHHHh---hc------ccccc
Confidence 9999999999999888776543 2 12222 2 29999999999955443321 00 00000
Q ss_pred CCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcC
Q 012386 315 KLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVR 394 (465)
Q Consensus 315 ~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~ 394 (465)
. +..+..+. .+. ....+++. ++.++..|..+++++++++|.+|+++++.++|
T Consensus 212 ~-----------~~~~~~~~-~~~-~~~~v~~~-----------a~~gd~~a~~i~~~~~~~L~~~i~~l~~~l~p---- 263 (326)
T 2qm1_A 212 E-----------LKQAIDDG-QDV-SSKDVFEF-----------AEKGDHFALMVVDRVCFYLGLATGNLGNTLNP---- 263 (326)
T ss_dssp H-----------HHHHHHHT-CCC-CHHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred h-----------hhhccccc-cCC-CHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC----
Confidence 0 00000000 000 12233332 56678999999999999999999999999998
Q ss_pred CCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHHHHH
Q 012386 395 DGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLAA 454 (465)
Q Consensus 395 ~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~Aa 454 (465)
+ .|+++|++....+.|.+.+++.+++...+.....+.|..+ +|++.+|||.++.
T Consensus 264 ----~--~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 320 (326)
T 2qm1_A 264 ----D--SVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLAL 320 (326)
T ss_dssp ----S--EEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGG
T ss_pred ----C--EEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHH
Confidence 4 6889999999999999999999988754321224566654 7889999998864
|
| >1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-25 Score=233.25 Aligned_cols=331 Identities=14% Similarity=0.110 Sum_probs=231.3
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCC----CCcceeccccccCCCCCcceeEEEEEeCCceEEEEEEEecCCc
Q 012386 43 EMEEKCGTPIGKLRQVADAMTVEMHAGLASEGG----SKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGRE 118 (465)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~~~----s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V~l~g~~ 118 (465)
++.+.+.++...+.++.++|.+ +||-.+.+ |+----|+.+.--| +.+++|+||+|||++|++++++.|+
T Consensus 35 ~la~~~~ls~~tv~~~v~~L~~---~g~i~~~~~~~~~~~GR~~~~l~~~~---~~~~~lgiDiG~t~i~~~l~d~~G~- 107 (406)
T 1z6r_A 35 DLSRLAQLAPASITKIVHEMLE---AHLVQELEIKEAGNRGRPAVGLVVET---EAWHYLSLRISRGEIFLALRDLSSK- 107 (406)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH---HTSEEEC-------------CEEECC---TTCEEEEEEEETTEEEEEEEETTCC-
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCcEEeecccCCCCCCCCCeEEEEcC---CccEEEEEEEcCCEEEEEEEcCCCC-
Confidence 4555667888888888888876 67743211 11111222221112 3568999999999999999999884
Q ss_pred ceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEEeccCCccc
Q 012386 119 GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFS 198 (465)
Q Consensus 119 ~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li~wtKgF~ 198 (465)
++.+. .++.|. .+.+++++.+++.|.+++++.+.. ..+...+|+++|+|++. ..+.+. |.. +
T Consensus 108 --il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~-~~~--~ 169 (406)
T 1z6r_A 108 --LVVEE--SQELAL----KDDLPLLDRIISHIDQFFIRHQKK----LERLTSIAITLPGIIDT---ENGIVH-RMP--F 169 (406)
T ss_dssp --EEEEE--EEECCS----SCSSCHHHHHHHHHHHHHHHTGGG----CCCEEEEEEEESSEEET---TTTEEE-ECT--T
T ss_pred --EEEEE--EecCCC----CCHHHHHHHHHHHHHHHHHhcCCC----cCceeEEEEEeecCEeC---CCCEEe-cCC--C
Confidence 66543 445442 357889999999999999876432 14578999999999975 234444 222 2
Q ss_pred cCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCceEEEEEEccccceeEEccCCCCcccCC---
Q 012386 199 IEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTGTNAAYVERAHAIPKWHG--- 271 (465)
Q Consensus 199 ~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIlGTG~Na~yie~~~~i~k~~~--- 271 (465)
.+++.+.|+.+.|++.+ ++|| .+.||++++++++.+. +.++.+.+++|||++++++.+++.+.+.++
T Consensus 170 l~~w~~~~l~~~l~~~~---~~pv---~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~AG 243 (406)
T 1z6r_A 170 YEDVKEMPLGEALEQHT---GVPV---YIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLV 243 (406)
T ss_dssp CTTCSSBCHHHHHHHHH---SSCE---EEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEETTTTSSCCB
T ss_pred CCCccCCCHHHHHHHHH---CCCE---EEechhHHHHHHHHHhcCCCCCCcEEEEEECCcEEEEEEECCEEeecCCCcCc
Confidence 33455899999999999 8996 8999999999999864 567899999999999999999887776553
Q ss_pred C-----CCCC------Cce-eeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHH
Q 012386 272 L-----LPKS------GEM-IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLR 339 (465)
Q Consensus 272 ~-----~~~~------g~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~ 339 (465)
+ +++. |.. |+|.++|+..|-+.++..+ .. .+ +..+. ....
T Consensus 244 EiGh~~v~~~g~~c~cG~~gclE~~~S~~al~~~~~~~~---~~---~~----~~~~~---------------~~~~--- 295 (406)
T 1z6r_A 244 EIGHTQVDPYGKRCYCGNHGCLETIASVDSILELAQLRL---NQ---SM----SSMLH---------------GQPL--- 295 (406)
T ss_dssp CGGGSBSCTTSCBCTTSCBSBTHHHHSHHHHHHHHHHHH---TT---CT----TCGGG---------------SSCC---
T ss_pred cCCceEecCCCCCCCCCCccchHHHcCHHHHHHHHHHhh---hc---cc----ccccC---------------cccC---
Confidence 2 1222 222 9999999998854433321 00 00 00000 0001
Q ss_pred HHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHH
Q 012386 340 VVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSAC 419 (465)
Q Consensus 340 ~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~ 419 (465)
....+++. ++.++..|..+++++++++|.+|+++++.++| + .|+++|++....+.|.+.
T Consensus 296 ~~~~v~~~-----------a~~gD~~a~~~l~~~~~~L~~~i~~l~~~ldP--------~--~IvlgG~i~~~~~~l~~~ 354 (406)
T 1z6r_A 296 TVDSLCQA-----------ALRGDLLAKDIITGVGAHVGRILAIMVNLFNP--------Q--KILIGSPLSKAADILFPV 354 (406)
T ss_dssp CHHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------S--EEEEESGGGGGHHHHHHH
T ss_pred CHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC--------C--EEEEeCccchhhHHHHHH
Confidence 12233333 56678899999999999999999999999999 4 588999999999999999
Q ss_pred HHHHHHHHhccCCCccEEEEEe---CChhHHHHHHHH
Q 012386 420 MQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLA 453 (465)
Q Consensus 420 l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~A 453 (465)
+++.+++...+.....+.|..+ +|++.+|||++.
T Consensus 355 i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~ 391 (406)
T 1z6r_A 355 ISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVK 391 (406)
T ss_dssp HHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHH
T ss_pred HHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHH
Confidence 9999988743221224566654 789999997654
|
| >3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-26 Score=230.83 Aligned_cols=289 Identities=16% Similarity=0.171 Sum_probs=210.8
Q ss_pred CcceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcce
Q 012386 92 DEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (465)
Q Consensus 92 ~E~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~ 171 (465)
...+++|+||+|||++|++++++.|+ ++.+. +++.|.. .+.+++++.|.+.|.++++. . .+...
T Consensus 16 ~~~~~~lgidiggt~i~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~~-~-------~~i~g 79 (321)
T 3r8e_A 16 YFQGMILGIDVGGTSVKFGLVTPEGE---IQNAT--RFMTADW---VNGIGFVESMKLEIGNFLKQ-Y-------PIVKG 79 (321)
T ss_dssp ---CCEEEEECCSSEEEEEEECTTCC---EEEEE--EEEHHHH---HTTTCHHHHHHHHHHHHHHH-C-------TTCCE
T ss_pred ccCcEEEEEEECCCEEEEEEEcCCCc---EEEEE--EEeCCCC---CCHHHHHHHHHHHHHHHHhc-c-------CCeeE
Confidence 34568999999999999999999884 66544 4555432 36788999999999999862 1 34788
Q ss_pred eeeeeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCceEE
Q 012386 172 LGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIA 247 (465)
Q Consensus 172 lG~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~~~i 247 (465)
+|+++|+|++.. ++.++..+ +++++.+.|+.+.|++.+. ++|| .|.||+++.++++.+. +.++.+
T Consensus 80 igi~~pG~vd~~---~g~v~~~~---~l~~w~~~~l~~~l~~~~~--~~pV---~v~NDa~aaalaE~~~g~~~~~~~~v 148 (321)
T 3r8e_A 80 VGIGWPGLVSLD---RTKVILLP---NIPSVVNVPIVEILRSEFP--HIHF---KIENDAKCAALGEYYFGENKRMQTFI 148 (321)
T ss_dssp EEEEESSEECTT---SCCEEEBT---TBCCCCSCCHHHHHHHHCT--TSEE---EEEEHHHHHHHHHHHHSTTTTCSSEE
T ss_pred EEEEecccEECC---CCEEEeCC---CCccccCCCHHHHHHHHcC--CCCE---EEEchHHHHHHHHHHhCCCCCCCcEE
Confidence 999999999742 33333222 2333447999999988663 5775 9999999999999874 568899
Q ss_pred EEEEccccceeEEccCCCCcccCCC------CCCCCceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCc
Q 012386 248 AVILGTGTNAAYVERAHAIPKWHGL------LPKSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFI 321 (465)
Q Consensus 248 glIlGTG~Na~yie~~~~i~k~~~~------~~~~g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~ 321 (465)
.+++|||++++++.+++.+.+.++. ++.++.-|+|.++|+..|-+..+..... . . ++.+. .
T Consensus 149 ~l~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~~~~~gclE~~~S~~al~~~~~~~~~~---~------~-~~~~~--~- 215 (321)
T 3r8e_A 149 LLALGTGVGSGVMMNGKLFIGGRGNGTEVGHMLTTRGKSLENQVGINHLIAYTHEQLAL---D------V-AKKSS--L- 215 (321)
T ss_dssp EEEESSSEEEEEEETTEECCCTTSCCCCGGGCBCTTSSBSHHHHSHHHHHHHHHHHHHH---C------T-TCCCS--G-
T ss_pred EEEECCceEEEEEECCEEecCCCCCCcccccccCCCCCcHHHhcCHHHHHHHHHHHhhc---c------C-ccccc--c-
Confidence 9999999999999999888776542 1222244999999999995554443221 1 0 11110 0
Q ss_pred cCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceE
Q 012386 322 LRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKS 401 (465)
Q Consensus 322 l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~ 401 (465)
. .+... ....+++. ++.++..|..+++++++++|.+|+++++.++| +
T Consensus 216 ------~---~~~~~---~~~~i~~~-----------a~~gD~~a~~~~~~~~~~La~~i~~l~~~ldP--------~-- 262 (321)
T 3r8e_A 216 ------H---TIAEL---SPKVIADH-----------AAQGDALALAVWADIGTIIGESLVNIVRVMDL--------N-- 262 (321)
T ss_dssp ------G---GCSSC---CHHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------C--
T ss_pred ------c---ccccC---CHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------C--
Confidence 0 00001 12333333 66778999999999999999999999999999 4
Q ss_pred EEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHHHH
Q 012386 402 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLA 453 (465)
Q Consensus 402 ~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~A 453 (465)
.|+++|++....+.|.+.+++.+++...+.....+.|+.+ +|++.+|||.++
T Consensus 263 ~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 263 NILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred EEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 6889999999999999999999998865432345677776 789999999886
|
| >2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-25 Score=230.61 Aligned_cols=309 Identities=14% Similarity=0.130 Sum_probs=221.6
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCC---CCCcceeccccccCCCCCcceeEEEEEeCCceEEEEEEEecCCcc
Q 012386 43 EMEEKCGTPIGKLRQVADAMTVEMHAGLASEG---GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREG 119 (465)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~~---~s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V~l~g~~~ 119 (465)
++.+...++...+.++.++|.+ +||-.+. .|+-=-=|+.+.-- .+.+++|+||+|||++|++++++.|+
T Consensus 38 ~la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~~~GR~~~~l~~~---~~~~~~lGIDiGgt~i~~~l~d~~G~-- 109 (380)
T 2hoe_A 38 ELAEELGLTKTTVGEIAKIFLE---KGIVVEEKDSPKGVGRPTKSLKIS---PNCAYVLGIEVTRDEIAACLIDASMN-- 109 (380)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---HTSEEEEECCC----CCCEEEEEC---GGGCEEEEEEECSSEEEEEEEETTCC--
T ss_pred HHHHHHCcCHHHHHHHHHHHHH---CCCEEeecCCCCCCCCCceEEEEc---cCCCeEEEEEECCCEEEEEEECCCCC--
Confidence 4455556888888888887766 5773321 11100011111100 23568999999999999999999884
Q ss_pred eeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccc-c-CCceEEeccCCcc
Q 012386 120 RVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQT-S-IASGDLIKWTKGF 197 (465)
Q Consensus 120 ~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~-~-i~~g~Li~wtKgF 197 (465)
++.+. .++.|.. .+.+++++.+.+.|.+++++.+... .+...+|+++|+|++.. + +.....+.|.
T Consensus 110 -vl~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~gigi~~pG~vd~~~g~v~~~~~l~w~--- 176 (380)
T 2hoe_A 110 -ILAHE--AHPLPSQ---SDREETLNVMYRIIDRAKDMMEKLG----SKLSALTVAAPGPIDTERGIIIDPRNFPLS--- 176 (380)
T ss_dssp -EEEEE--EEECCSS---CCHHHHHHHHHHHHHHHHHHHHHTT----CCCCEEEEEESSCEETTTTEECCCSSCTTB---
T ss_pred -EEEEE--EEccCCC---CCHHHHHHHHHHHHHHHHHhcCCCc----CcEEEEEEEeeccEECCCCEEeccCCCCCc---
Confidence 66543 4555543 3578999999999999998754221 35788999999999752 1 1111122454
Q ss_pred ccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCC--ceEEEEEEccccceeEEccCCCCcccCCCC--
Q 012386 198 SIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK--DAIAAVILGTGTNAAYVERAHAIPKWHGLL-- 273 (465)
Q Consensus 198 ~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~--~~~iglIlGTG~Na~yie~~~~i~k~~~~~-- 273 (465)
+.|+.+.|++.+ ++|| .+.||++++++++.|.+. ++.+.+++|||++++++.+++.+.++++..
T Consensus 177 ------~~~l~~~l~~~~---~~pV---~v~NDanaaalaE~~~g~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~aGE 244 (380)
T 2hoe_A 177 ------QIPLANLLKEKY---GIEV---WVENDADMGAVGEKWYTKRDDSFAWILTGKGIGAGIIIDGELYRGENGYAGE 244 (380)
T ss_dssp ------TSCHHHHHHHHH---CSEE---EEEEHHHHHHHHHHHHTTCCSCEEEEEESSSCEEEEEETTEECCCSSSCCCC
T ss_pred ------CCChHHHHHHHh---CCCE---EEechHHHHHHHHHHhCCCCCcEEEEEeCCceEEEEEECCEEeccCCCcccc
Confidence 799999999999 8986 999999999999987544 899999999999999999998887766521
Q ss_pred ------CCC-----Cc-eeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHH
Q 012386 274 ------PKS-----GE-MIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVV 341 (465)
Q Consensus 274 ------~~~-----g~-~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~ 341 (465)
++. |. -|+|.++|+..|-+ . .+.
T Consensus 245 iGh~~v~~~~~c~cG~~gclE~~~s~~~l~~------------------~-~~~-------------------------- 279 (380)
T 2hoe_A 245 IGYTRVFNGNEYVFLEDVCNENVVLKHVLSM------------------G-FSS-------------------------- 279 (380)
T ss_dssp GGGCEEECSSSEEEHHHHHCHHHHHHHHHHH------------------C-CC---------------------------
T ss_pred ccceEecCCCCCCCCCccHHHHHcCHHHHHH------------------H-HHH--------------------------
Confidence 111 11 17888888766522 0 000
Q ss_pred HHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHH
Q 012386 342 GKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQ 421 (465)
Q Consensus 342 ~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~ 421 (465)
++ +.++..+..|..+++++++++|.+|+++++.++| + .|+++|++....+.|.+.++
T Consensus 280 --v~-----------~~a~~gD~~a~~~l~~~~~~La~~i~~l~~~ldP--------~--~IvlgG~~~~~~~~l~~~l~ 336 (380)
T 2hoe_A 280 --LA-----------EARDSGDVRVKEYFDDIARYFSIGLLNLIHLFGI--------S--KIVIGGFFKELGENFLKKIK 336 (380)
T ss_dssp --TT-----------HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------C--EEEEEEGGGGGHHHHHHHHH
T ss_pred --HH-----------HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC--------C--EEEEcCchhhhhHHHHHHHH
Confidence 00 1145567888999999999999999999999999 4 58899999988899999999
Q ss_pred HHHHHHhccCCCccEEEEEe---CChhHHHHHHHHH
Q 012386 422 STVKELLGEEVSETVVIEHS---NDGSGIGAALLAA 454 (465)
Q Consensus 422 ~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~Aa 454 (465)
+.+++...+. ..+.+..+ +|++.+|||.++.
T Consensus 337 ~~l~~~~~~~--~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 337 IEVETHLLYK--HSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp HHHHHHCSSS--CCCEEEECCCCSCHHHHHHHHHHH
T ss_pred HHHHHhcCCC--CCcEEEEcCCCCcHHHHHHHHHHH
Confidence 9998875433 34566554 7889999998863
|
| >3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.5e-26 Score=225.11 Aligned_cols=270 Identities=17% Similarity=0.171 Sum_probs=202.3
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
++|+||+|||++|++++++++ ++.+ .+++.|.. ..+++++.|.+.+.+++++.. .+...+|++
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~~----~l~~--~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~-------~~i~gigi~ 64 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGKR----LLSK--VVVPTPKE----GGERVAEALAEAAERAEREAG-------VRGEAIGLG 64 (302)
T ss_dssp CEEEEEECSSEEEEEEECSSS----BSCC--EEEECCSS----CHHHHHHHHHHHHHHHHHHHT-------CCCSSEEEE
T ss_pred EEEEEEEcCCEEEEEEEeCCC----cEEE--EEEcCCCC----ChHHHHHHHHHHHHHHHhhcc-------CCceEEEEE
Confidence 589999999999999999863 3322 24566543 238899999999999987642 347889999
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCceEEEEEE
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVIL 251 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIl 251 (465)
+|+|++.. ++.+...+ +++++.+.|+.+.|++.+ ++|| .+.||++++++++.+. +.++.+.+++
T Consensus 65 ~pG~vd~~---~g~v~~~~---~~~~w~~~~l~~~l~~~~---~~pv---~v~NDa~aaal~E~~~g~~~~~~~~~~l~~ 132 (302)
T 3vov_A 65 TPGPLDFR---RGVIRFAP---NIPGVQDFPIRRILEEAT---GRPV---FLENDANAAALAEHHLGAAQGEESSLYLTV 132 (302)
T ss_dssp ESSCEETT---TTEEC------CCTTCTTCCHHHHHHHHH---SSCE---EEEEHHHHHHHHHHHHSTTTTCSCEEEEEE
T ss_pred ecccEeCC---CCEEEcCC---CCCCcCCCChHHHHHHhh---CCCE---EEEechHHHHHHHHHhCCCCCCCCEEEEEE
Confidence 99999753 23332111 233444799999999999 8996 9999999999999874 5688999999
Q ss_pred ccccceeEEccCCCCcccCC---C-----CCCCC------ce-eeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCC
Q 012386 252 GTGTNAAYVERAHAIPKWHG---L-----LPKSG------EM-IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKL 316 (465)
Q Consensus 252 GTG~Na~yie~~~~i~k~~~---~-----~~~~g------~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l 316 (465)
|||++++++.+++.+.+.++ + ++++| .. |+|.++|+..|-+..+. .. + .
T Consensus 133 GtGiG~gii~~g~l~~G~~g~aGEiGh~~v~~~g~~c~cg~~gclE~~~s~~~l~~~~~~---~~-------~-~----- 196 (302)
T 3vov_A 133 STGIGGGVVLGGRVLRGERGQGGELGHLTLLPGGPACGCGLEGCLEALAAGRALERDATY---AF-------Q-R----- 196 (302)
T ss_dssp SSSEEEEEEETTEECCCTTSCTTCGGGSBSSTTCCBCTTSCBSBHHHHHSHHHHHHHHHH---HH-------T-S-----
T ss_pred CCceeEEEEECCEEeeCCCCCCccccceEecCCCCCCCCCCcchHHHHhCHHHHHHHHHH---hh-------C-C-----
Confidence 99999999999888776654 2 12222 22 99999999998443322 11 0 0
Q ss_pred CCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCC
Q 012386 317 KIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDG 396 (465)
Q Consensus 317 ~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~ 396 (465)
.++ ..++++. ++..+..|..++++++++++.+|+++++.++|
T Consensus 197 ----~~~-----------------~~~i~~~-----------a~~gd~~a~~~~~~~~~~l~~~i~~l~~~~~p------ 238 (302)
T 3vov_A 197 ----PVD-----------------TRELFRL-----------FQAGDPKAERLVLQAARYVGIGLASLVKAFDP------ 238 (302)
T ss_dssp ----CCC-----------------HHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC------
T ss_pred ----CCC-----------------HHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHCC------
Confidence 011 1223332 56677889999999999999999999999999
Q ss_pred CCceEEEEEeccee-ccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHHHHH
Q 012386 397 EKQKSVIALDGGLF-EHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLAA 454 (465)
Q Consensus 397 ~~~~~~V~idGsv~-~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~Aa 454 (465)
+ .|.++|++. ...+.|.+.+++.+++...+..... |+.+ +|++.+|||.++.
T Consensus 239 --~--~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~--i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 239 --G--VVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPP--LRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp --S--EEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCC--EEECSSGGGHHHHHHHHHHH
T ss_pred --C--EEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCc--EEEcCCCCcHHHHHHHHHHH
Confidence 4 688999999 8889999999999998765433333 5444 8999999998874
|
| >4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-25 Score=224.36 Aligned_cols=268 Identities=19% Similarity=0.210 Sum_probs=202.1
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
++|+||+|||++|++++++.|+ ++.+. +++.|.. +.+++++.|.+.+.++..+.+ ....+|++
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~--------~~~gigi~ 87 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLE---RVATE--RVPTPTD----DYPLLLETIAGLVAKYDQEFA--------CEGKIGLG 87 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEEE--EEECCTT----CHHHHHHHHHHHHHHHHHHHT--------SCCEEEEE
T ss_pred EEEEEEECCCEEEEEEEeCCCc---EEEEE--EecCCCC----CHHHHHHHHHHHHHHHHHhcC--------CccEEEEE
Confidence 7999999999999999999885 66543 4565542 578899999999999887643 25789999
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCceEEEEEE
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVIL 251 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIl 251 (465)
+|+|++.. ++.+ .++ +++.+.+.|+.+.|++.| ++|| .|.||++++++++.+. +.++.+.+++
T Consensus 88 ~pG~vd~~---~g~v-~~~---~~~~~~~~~l~~~l~~~~---~~pV---~v~NDa~aaalgE~~~g~~~~~~~~~~l~~ 154 (327)
T 4db3_A 88 LPGMEDAD---DATV-LTV---NVPAAKGKPLRADLEAKI---GRSV---KIENDANCFALSEAWDEELQDAPSVMGLIL 154 (327)
T ss_dssp ESEEECTT---TCCE-EES---SSGGGTTSCHHHHHHHHH---SSCC---EEEEHHHHHHHHHHTSTTTTTCSEEEEEEE
T ss_pred eeccEeCC---CCEE-EcC---CCccccCCCHHHHHHHHH---CCCE---EEecchhHHHHHHHHhCCCCCCCcEEEEEe
Confidence 99999742 2222 122 122234799999999999 8997 9999999999999874 4688999999
Q ss_pred ccccceeEEccCCCCcccCC---C-----CCC----------CC------ce-eeeehhccccHHHHHHHHHHHHhhccc
Q 012386 252 GTGTNAAYVERAHAIPKWHG---L-----LPK----------SG------EM-IFEKIISGMYLGEIVRRVLCRMAEEAN 306 (465)
Q Consensus 252 GTG~Na~yie~~~~i~k~~~---~-----~~~----------~g------~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~ 306 (465)
|||++++++.+++.+.+.++ + +++ .| .. |+|.++|+..|-+..+.. .
T Consensus 155 GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~~~~~~~~~~~~g~~C~cG~~gclE~~~S~~al~~~~~~~---~----- 226 (327)
T 4db3_A 155 GTGFGGGLIYEGKVFSGRNNVAGELGHMRLPLDAWFHLGDNAPLLGCGCGKKGCLDSYLSGRGFELLYAHY---Y----- 226 (327)
T ss_dssp SSSEEEEEEETTEECCCTTSCTTCGGGSBCCHHHHHHTCTTCCCCBCTTSCBSBGGGTSSHHHHHHHHHHH---H-----
T ss_pred CccceEEEEECCEEeecCCCcCcccccEEeccccccccccccCCCcCCCCCcchhHhhhCHHHHHHHHHHh---c-----
Confidence 99999999999887766544 2 121 22 22 999999999984433221 0
Q ss_pred CCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012386 307 FFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILK 386 (465)
Q Consensus 307 lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~ 386 (465)
.. .++ ...+++. ++..+..|..+++++++++|.+|+++++
T Consensus 227 ------~~------~~~-----------------~~~i~~~-----------a~~gD~~a~~~~~~~~~~La~~i~~l~~ 266 (327)
T 4db3_A 227 ------GE------EKK-----------------AIDIIKA-----------NAAGDEKAAEHVERFMELLAICFGNIFT 266 (327)
T ss_dssp ------SC------CCC-----------------HHHHHHH-----------HHHTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------CC------CCC-----------------HHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 011 1223332 6678899999999999999999999999
Q ss_pred HhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHHHH
Q 012386 387 KLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLA 453 (465)
Q Consensus 387 ~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~A 453 (465)
.++| + .|.++|++... +.|.+.+++.+++.+.+. ...++|+.+ +|++.+|||.++
T Consensus 267 ~l~p--------~--~IvlgGgi~~~-~~l~~~l~~~l~~~~~~~-~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 267 ANDP--------H--VVALGGGLSNF-ELIYEEMPKRVPKYLLSV-AKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp HHCC--------S--EEEEESGGGGC-THHHHHHHHHGGGGSCTT-CCCCEEEECSCGGGHHHHHHHHTT
T ss_pred HhCC--------C--EEEEeCcccch-HHHHHHHHHHHHHHhccc-cCCCEEEECCCCCcHHHHHHHHHH
Confidence 9999 4 68899999875 678899999998876543 245677776 899999999765
|
| >4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.7e-25 Score=217.22 Aligned_cols=266 Identities=15% Similarity=0.185 Sum_probs=192.9
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
++|+||+|||++|++++++.|+ ++.+. ++++|.. +.+++++.+.+ ++.+. .+...+|++
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~~----~~~~~~~~i~~----~~~~~--------~~i~gigi~ 63 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPHGE---IILTK--SAEISGS----DGDQILAEMKV----FLAEN--------TDVTGIAVS 63 (297)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEE--EEECSTT----CHHHHHHHHHH----HHHTC--------TTCCEEEEE
T ss_pred EEEEEEeCCCeEEEEEECCCCC---EEEEE--EecCCCC----CHHHHHHHHHH----HHhhc--------CCeeEEEEe
Confidence 6899999999999999999885 66543 4555432 34556555544 44331 247889999
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCceEEEEEE
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVIL 251 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIl 251 (465)
+|+|++.. ++.+..-+ +++++.+.|+.+.|++.+ ++|| .+.||+++.++++++. +.++.+.+++
T Consensus 64 ~pG~vd~~---~g~v~~~~---~l~~w~~~~l~~~l~~~~---~~pV---~v~NDa~aaal~E~~~g~~~~~~~~~~l~~ 131 (297)
T 4htl_A 64 APGYVNPK---TGLITMGG---AIRRFDNFNLKEWLEAET---GLPV---AIENDANCALLAEKWLGKGQDLDDFLCLTI 131 (297)
T ss_dssp ESSEECTT---TCEEEECT---TCGGGTTEEHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHSTTTTCSSEEEEEE
T ss_pred cCcceeCC---CCEEEeCC---CCCCccCCCHHHHHHHHH---CcCE---EEecHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 99999752 33332211 233344799999999999 9996 9999999999999873 5689999999
Q ss_pred ccccceeEEccCCCCcccCC---C-----CCCC-----CceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCC
Q 012386 252 GTGTNAAYVERAHAIPKWHG---L-----LPKS-----GEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKI 318 (465)
Q Consensus 252 GTG~Na~yie~~~~i~k~~~---~-----~~~~-----g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~ 318 (465)
|||++++++.+++.+.+.++ + ++++ +.-|+|.++|+..|-+..+.. . + . +.
T Consensus 132 GtGiG~giv~~G~l~~G~~g~aGEiGh~~~~~~~~~~~~~~~le~~~s~~~l~~~~~~~---~-------~-~-~~---- 195 (297)
T 4htl_A 132 GTGIGGGIFSNGELVRGGRFRAGEFGYMFSERPGAFRPGKYTLNETTTMLVLRRQYAEL---T-------G-R-PL---- 195 (297)
T ss_dssp SSSEEEEEEETTEECCCTTSCCCCGGGSBSSCCCSSCGGGGBHHHHSSHHHHHHHHHHH---H-------C-C-CG----
T ss_pred CcceEEEEEECCEEEecCCCCcccccceEecCCCCcCcccCcHHHhccHHHHHHHHHHH---h-------c-C-Cc----
Confidence 99999999999988876654 2 1222 223899999999884433221 1 0 0 10
Q ss_pred CCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCC
Q 012386 319 PFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEK 398 (465)
Q Consensus 319 ~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~ 398 (465)
..+ ....+++. ++..+..|..+++++++++|.+|+++++.++|
T Consensus 196 -~~~-----------------~~~~i~~~-----------a~~gd~~a~~~~~~~~~~La~~i~~l~~~~~p-------- 238 (297)
T 4htl_A 196 -EEI-----------------TGEEIFAN-----------YDAHDAVSERLITEFYTGICTGLYNLIYLFDP-------- 238 (297)
T ss_dssp -GGC-----------------CHHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------
T ss_pred -cCC-----------------CHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCC--------
Confidence 001 11233332 56778899999999999999999999999999
Q ss_pred ceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHHHHH
Q 012386 399 QKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLAA 454 (465)
Q Consensus 399 ~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~Aa 454 (465)
+ .|.++|++... +.|.+.+++.+++... ..+.|+.+ +|++.+|||.++.
T Consensus 239 ~--~IvlgGgi~~~-~~~~~~l~~~l~~~~~----~~~~i~~s~lg~~a~~~GAa~l~~ 290 (297)
T 4htl_A 239 T--HIFIGGGITSR-PTFIAELKHHMESFGL----RDTIIETATHKNQAGLLGAVYHFL 290 (297)
T ss_dssp S--EEEEESGGGGS-TTHHHHHHHHHTTTCC----TTCEEEECSCTTTHHHHHHHHHHH
T ss_pred C--EEEEeCccccc-HHHHHHHHHHHHHhcc----CCCeEEECCcCChHHHHhHHHHHH
Confidence 4 68899999975 7899999998876532 34567666 8999999998874
|
| >2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.93 E-value=8e-25 Score=219.91 Aligned_cols=269 Identities=19% Similarity=0.238 Sum_probs=197.5
Q ss_pred eeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeee
Q 012386 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (465)
Q Consensus 95 G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~ 174 (465)
+++|+||+|||++|++++++.|+ ++.+. +++.+.. +.+++++.|.+.+.++..+.+ ....+|+
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~--------~i~~igi 86 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRR---LQWEK--RVPTPHT----SYSAFLDAVCELVEEADQRFG--------VKGSVGI 86 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCCS----CHHHHHHHHHHHHHHHHHHHT--------SCCEEEE
T ss_pred ceEEEEEECCCEEEEEEEeCCCC---EEEEE--EecCCCC----CHHHHHHHHHHHHHHHHHhcC--------CccEEEE
Confidence 47999999999999999999884 66443 4555432 467899999999988876542 2567999
Q ss_pred eeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCceEEEEE
Q 012386 175 TFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVI 250 (465)
Q Consensus 175 tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~~~iglI 250 (465)
++|+|++.. .+.++ ++ +.+.+.+.|+.+.|++.+ ++|| .|.||++++++++.+. +.++.+.++
T Consensus 87 ~~pG~vd~~---~g~v~-~~---~~~~~~~~~l~~~l~~~~---~~pv---~v~NDa~aaalgE~~~g~~~~~~~~v~l~ 153 (327)
T 2ap1_A 87 GIPGMPETE---DGTLY-AA---NVPAASGKPLRADLSARL---DRDV---RLDNDANCFALSEAWDDEFTQYPLVMGLI 153 (327)
T ss_dssp EESSBSCCT---TSCCB-CT---TCTTTTTSCHHHHHHHHH---TSCE---EEEEHHHHHHHHHHTSTTGGGCSEEEEEE
T ss_pred EeeeeEECC---CCEEE-cc---CCCccCCCChHHHHHHHH---CCCE---EEecHHHHHHHHHHHhCcCCCCCcEEEEE
Confidence 999999752 23332 22 333445799999999999 8996 9999999999999865 467899999
Q ss_pred EccccceeEEccCCCCcccCC---C-----CCCC----------------Cc-eeeeehhccccHHHHHHHHHHHHhhcc
Q 012386 251 LGTGTNAAYVERAHAIPKWHG---L-----LPKS----------------GE-MIFEKIISGMYLGEIVRRVLCRMAEEA 305 (465)
Q Consensus 251 lGTG~Na~yie~~~~i~k~~~---~-----~~~~----------------g~-~~fEkm~SG~YLGEi~R~~l~~~~~~~ 305 (465)
+|||++++++.+++.+.++++ + +++. |. -|+|.++|+..|-+..+. ..
T Consensus 154 ~GtGiG~giv~~G~l~~G~~g~aGE~Gh~~~~~~~~~~~~~~~~g~~c~cG~~gcle~~~s~~~l~~~~~~---~~---- 226 (327)
T 2ap1_A 154 LGTGVGGGLVLNGKPITGQSYITGEFGHMRLPVDALTLMGFDFPLRRCGCGQMGCIENYLSGRGFAWLYQH---YY---- 226 (327)
T ss_dssp ESSSEEEEEEETTEEECCTTSCTTCGGGSBCCHHHHHHHCTTSCCCBCTTSCBSBTHHHHSHHHHHHHHHH---HH----
T ss_pred ECCcEEEEEEECCEEeecCCCcccccccEEEecCcccccccccCCCcCCCCchhhHHHHhCHHHHHHHHHH---hc----
Confidence 999999999999887766553 1 1111 22 299999999887443222 10
Q ss_pred cCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012386 306 NFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGIL 385 (465)
Q Consensus 306 ~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii 385 (465)
+ . + . ....+++. ++..+..|..+++++++++|.+|++++
T Consensus 227 ---~-~-~--------~-----------------~~~~i~~~-----------a~~gd~~a~~il~~~~~~La~~i~~l~ 265 (327)
T 2ap1_A 227 ---D-Q-S--------L-----------------QAPEIIAL-----------WEQGDEQAHAHVERYLDLLAVCLGNIL 265 (327)
T ss_dssp ---C-C-C--------C-----------------CHHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---C-C-C--------C-----------------CHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0 0 11223332 566778999999999999999999999
Q ss_pred HHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHHHH
Q 012386 386 KKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLA 453 (465)
Q Consensus 386 ~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~A 453 (465)
+.++| + .|+++|++....+.|.+ +++.+++.+.+ ....+.|+.+ +|++.+|||.++
T Consensus 266 ~~l~p--------~--~IvlgG~i~~~~~~~~~-l~~~l~~~~~~-~~~~~~i~~s~~~~~a~~~GAa~la 324 (327)
T 2ap1_A 266 TIVDP--------D--LLVIGGGLSNFTAITTQ-LAERLPRHLLP-VARAPRIERARHGDAGGMRGAAFLH 324 (327)
T ss_dssp HHHCC--------S--EEEEESGGGGSTHHHHS-SGGGSGGGSCT-TCCCCEEEECSCTTTHHHHHHHHTT
T ss_pred HHhCC--------C--EEEEeChhhcchhHHHH-HHHHHHHhhcc-ccCCCEEEEcCCCCcHHHHHHHHHH
Confidence 99999 4 58899999987765554 88888776543 3345677775 688999999765
|
| >2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-24 Score=215.61 Aligned_cols=289 Identities=20% Similarity=0.205 Sum_probs=202.9
Q ss_pred ceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceee
Q 012386 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (465)
Q Consensus 94 ~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG 173 (465)
..++|+||+|||++|++++++.|+ ++.+. .++.| .+.+++++.+.+.+.+++.+.... ..+...+|
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~-----~~~~~~~~~i~~~i~~~~~~~~~~----~~~i~gig 94 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSMKGE---IVKKY--TQFNP-----KTYEERINLILQMCVEAAAEAVKL----NCRILGVG 94 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEECC-----SSHHHHHHHHHHHHHHHHHHHHHT----TEEEEEEE
T ss_pred CcEEEEEEECCCEEEEEEECCCCc---EEEEE--EEcCC-----CCHHHHHHHHHHHHHHHHHhcccc----cCceEEEE
Confidence 468999999999999999999884 66443 34444 246788999999999998764321 13467899
Q ss_pred eeeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCceEEEE
Q 012386 174 FTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAV 249 (465)
Q Consensus 174 ~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~~~igl 249 (465)
+++|+|++.. ++.++.-+. ..+++.+.|+.+.|++.+ ++|| .|.||++++++++.+. +.++.+.+
T Consensus 95 i~~pG~vd~~---~g~v~~~~~--~~~~w~~~~l~~~l~~~~---~~pv---~v~NDa~aaal~E~~~g~~~~~~~~v~i 163 (343)
T 2yhw_A 95 ISTGGRVNPR---EGIVLHSTK--LIQEWNSVDLRTPLSDTL---HLPV---WVDNDGNCAALAERKFGQGKGLENFVTL 163 (343)
T ss_dssp EEESSEEETT---TTEEEECCT--TSSSCSSEECHHHHHHHH---CSCE---EEEEHHHHHHHHHHHTSTTTTCSCEEEE
T ss_pred EecccCEeCC---CCEEEeCCc--CCCCCcCCCHHHHHHHHH---CCCE---EEechhHHHHHHHHHhCCCCCCCcEEEE
Confidence 9999999752 233331110 012344789999999999 8996 9999999999999864 45789999
Q ss_pred EEccccceeEEccCCCCcccCC---C-----CCCC------Cce-eeeehhccccHHHHHHHHHHHHhhcccCCCCCCCC
Q 012386 250 ILGTGTNAAYVERAHAIPKWHG---L-----LPKS------GEM-IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPP 314 (465)
Q Consensus 250 IlGTG~Na~yie~~~~i~k~~~---~-----~~~~------g~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~ 314 (465)
++|||++++++.+++.+.+.++ + +++. |.. |+|.++|+..|-+.++... ... +.
T Consensus 164 ~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~~~~~g~~c~cG~~gclE~~~s~~al~~~~~~~~---~~~--------~~ 232 (343)
T 2yhw_A 164 ITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLXGPDCSCGSHGCIEAYASGMALQREAKKLH---DED--------LL 232 (343)
T ss_dssp EESSSEEEEEEETTEECCCTTSCTTCGGGCBCCC--CBCTTSCBSBHHHHHSHHHHHHHHHHHH---HTT--------CS
T ss_pred EECCCEEEEEEECCEEecCCCCcccccCCEEEccCCCcCCCCCCCcHHHhcCHHHHHHHHHHhh---ccc--------cc
Confidence 9999999999999887766543 1 1222 222 9999999999855444322 111 00
Q ss_pred CCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcC
Q 012386 315 KLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVR 394 (465)
Q Consensus 315 ~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~ 394 (465)
.+.. .... .+. +. ....+++. ++..+..|..+++++++++|.+|+++++.++|
T Consensus 233 ~~~~-~~~~--------~~~--~~-~~~~v~~~-----------a~~gd~~a~~il~~~~~~La~~i~~l~~~l~P---- 285 (343)
T 2yhw_A 233 LVEG-MSVP--------KDE--AV-GALHLIQA-----------AKLGNAKAQSILRTAGTALGLGVVNILHTMNP---- 285 (343)
T ss_dssp CCTT-CCC--------------CC-CHHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHTCC----
T ss_pred cccc-cccc--------ccc--cC-CHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCC----
Confidence 0000 0000 000 00 12333333 66788999999999999999999999999998
Q ss_pred CCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe--CChhHHHHHHHHHH
Q 012386 395 DGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS--NDGSGIGAALLAAS 455 (465)
Q Consensus 395 ~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a--~Dgs~iGAAl~Aa~ 455 (465)
+ .|+++|++. +.|.+.+++.+++...+. ...+.+..+ +|.+.+|||.++.-
T Consensus 286 ----~--~IvlgG~i~---~~~~~~l~~~l~~~~~~~-~~~~~i~~s~~~~~~~~GAa~l~~~ 338 (343)
T 2yhw_A 286 ----S--LVILSGVLA---SHYIHIVKDVIRQQALSS-VQDVDVVVSDLVDPALLGAASMVLD 338 (343)
T ss_dssp ----S--EEEEESTTH---HHHHHHHHHHHHHHSCGG-GTTCEEEECCCSCHHHHHHHHHHHH
T ss_pred ----C--EEEEeCCcH---HHHHHHHHHHHHHhcccc-cCCcEEEEccCCCchHHHHHHHHHH
Confidence 4 588999996 578899999888765432 234566665 77889999988743
|
| >3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.4e-24 Score=212.39 Aligned_cols=270 Identities=18% Similarity=0.168 Sum_probs=186.2
Q ss_pred cceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCccee
Q 012386 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (465)
Q Consensus 93 E~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (465)
+.+++|+||+|||++|++++++.|+ ++.+. +++.|+. ..+++++.|.+.+.+++++.+ .+...+
T Consensus 5 ~~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~-------~~i~gi 68 (310)
T 3htv_A 5 QHNVVAGVDMGATHIRFCLRTAEGE---TLHCE--KKRTAEV----IAPGLVSGIGEMIDEQLRRFN-------ARCHGL 68 (310)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEEHHHH----HTTCHHHHHHHHHHHHHHHHT-------EEEEEE
T ss_pred CCCEEEEEEeCCCEEEEEEECCCCC---EEEEE--EecCccc----cHHHHHHHHHHHHHHHHHhcC-------CCeeEE
Confidence 4578999999999999999999884 66543 3444422 356788999999988887653 136889
Q ss_pred eeeeecccccc-c-CCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccc---cCCceEE
Q 012386 173 GFTFSFPVRQT-S-IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY---HNKDAIA 247 (465)
Q Consensus 173 G~tfSfPv~q~-~-i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y---~~~~~~i 247 (465)
|+++|+|++.. + +.....+.|.. ..+.|+.+.|++.+ ++|| .+.||++++++++.+ .+.++.+
T Consensus 69 gi~~pG~vd~~~g~v~~~~~l~~~~------~~~~~l~~~l~~~~---~~pv---~v~NDanaaa~~e~~~~~~~~~~~~ 136 (310)
T 3htv_A 69 VMGFPALVSKDKRTIISTPNLPLTA------ADLYDLADKLENTL---NCPV---EFSRDVNLQLSWDVVENRLTQQLVL 136 (310)
T ss_dssp EEEESSCBCTTSSCBCSCCSSSCCH------HHHTTHHHHHHHHH---TSCE---EEEEHHHHHHHHHHHHTTCTTSCEE
T ss_pred EEeccccEeCCCCEEEeCCCCCCcc------ccCccHHHHHHHHh---CCCE---EEeeHHHHHHHHHHhhcccCCceEE
Confidence 99999999753 2 33334445541 01268999999999 8996 999999999887643 3567899
Q ss_pred EEEEccccceeEEccCCCCcccCC---CC-----CCC------Cce-eeeehhccccHHHHHHHHHHHHhhcccCCCCCC
Q 012386 248 AVILGTGTNAAYVERAHAIPKWHG---LL-----PKS------GEM-IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTV 312 (465)
Q Consensus 248 glIlGTG~Na~yie~~~~i~k~~~---~~-----~~~------g~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~ 312 (465)
.+++|||++++++.+++.+.+.++ ++ ++. |+. |+|.++|+..|- |..- + .
T Consensus 137 ~v~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~~g~~C~cG~~GclE~~~S~~al~---~~~~-----~------~- 201 (310)
T 3htv_A 137 AAYLGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDMTQHCACGNPGCLETNCSGMALR---RWYE-----Q------Q- 201 (310)
T ss_dssp EEEESSSEEEEEEETTEEECCSSSCCCC---------------------CCSSSHHHHH---HHHT-----T------S-
T ss_pred EEEeceeEEEEEEECCEEeecCCCCceeCcceEeCCCCCcCCCCCCceehhhhCHHHHH---HHHH-----h------c-
Confidence 999999999999999988877654 21 222 222 999999999883 3211 0 0
Q ss_pred CCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 012386 313 PPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDT 392 (465)
Q Consensus 313 ~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~ 392 (465)
.. .++.+.+ ++. + ..++.++.++++. |.+|+++++.++|
T Consensus 202 ~~------~~~~~~~-----------------~~~-----------~-~~d~~~~~~~~~~----a~~la~l~~~~dP-- 240 (310)
T 3htv_A 202 PR------NYPLRDL-----------------FVH-----------A-ENAPFVQSLLENA----ARAIATSINLFDP-- 240 (310)
T ss_dssp CC------SSCGGGH-----------------HHH-----------H-TTCHHHHHHHHHH----HHHHHHHHHHHCC--
T ss_pred cC------CCCHHHH-----------------HHH-----------H-cCChHHHHHHHHH----HHHHHHHHHhhCC--
Confidence 00 1111111 111 1 1234455555554 4578889999999
Q ss_pred cCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhcc-CCCccEEEEEe---CChhHHHHHHHHH
Q 012386 393 VRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGE-EVSETVVIEHS---NDGSGIGAALLAA 454 (465)
Q Consensus 393 ~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~-~~~~~v~l~~a---~Dgs~iGAAl~Aa 454 (465)
+ .|+++|++.+..+.|.+.+.+.+++.+.. .....++|+.+ +|++.+|||.++.
T Consensus 241 ------~--~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 241 ------D--AVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp ------S--EEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred ------C--EEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 4 68899999999888899999999887642 12346777776 8999999998873
|
| >2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-24 Score=211.32 Aligned_cols=264 Identities=18% Similarity=0.169 Sum_probs=189.7
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
++|+||+|||++|++++++.|+ ++.+. +++.+.. .+.+++++.|.+.+.+++.+ ...+|++
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~~-----------~~~igi~ 62 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQ---IRDRR--ELPTPAS---QTPEALRDALSALVSPLQAH-----------AQRVAIA 62 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEEE--EEECCSS---CCHHHHHHHHHHHHTTTGGG-----------CSEEEEE
T ss_pred eEEEEEeCCCEEEEEEECCCCC---EEEEE--EecCCCC---CCHHHHHHHHHHHHHHHHhh-----------CCEEEEE
Confidence 4799999999999999999884 66543 4555432 24778888888777666432 2369999
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCCc---eEEEEEEc
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKD---AIAAVILG 252 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~~---~~iglIlG 252 (465)
+|+|++.. .+.++ ++- +++++.+.|+.+.|++.+ ++|| .+.||++++++++++.+.. +.+.+++|
T Consensus 63 ~pG~vd~~---~g~v~-~~~--~~~~w~~~~l~~~l~~~~---~~pv---~v~NDa~aaa~~e~~~g~~~~~~~v~l~~G 130 (289)
T 2aa4_A 63 STGIIRDG---SLLAL-NPH--NLGGLLHFPLVKTLEQLT---NLPT---IAINDAQAAAWAEFQALDGDITDMVFITVS 130 (289)
T ss_dssp ESSEEETT---EEECS-SGG--GGGGGTTCCHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHTSCTTCCCEEEEEES
T ss_pred eccceeCC---CCEEE-eCC--CCCcccCCChHHHHHHHH---CCCE---EEechHHHHHHHHHHhCCCCCceEEEEEeC
Confidence 99999752 22221 111 122334799999999999 8996 9999999999999865321 89999999
Q ss_pred cccceeEEccCCCCcccCC---C-----CCCC------Cce-eeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCC
Q 012386 253 TGTNAAYVERAHAIPKWHG---L-----LPKS------GEM-IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLK 317 (465)
Q Consensus 253 TG~Na~yie~~~~i~k~~~---~-----~~~~------g~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~ 317 (465)
||++++++.+++.+.+.++ + +++. |+. |+|.++|+..|-+ .. .. +.
T Consensus 131 tGiG~gii~~G~l~~G~~g~aGE~Gh~~~~~~g~~c~cG~~gcle~~~s~~~l~~---~~-----~~-----------~~ 191 (289)
T 2aa4_A 131 TGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIASGRGIAA---AA-----QG-----------EL 191 (289)
T ss_dssp SSEEEEEEETTEEECCTTSCCCCGGGSBSCTTSCBCTTSCBSBHHHHHSHHHHHH---TC-----CG-----------GG
T ss_pred ccEEEEEEECCEEeeCCCCCCccCCcEEECCCCCcCCCCCchhHHHHhCHHHHHH---HH-----HH-----------hc
Confidence 9999999999887766543 2 1222 322 9999999877622 10 00 00
Q ss_pred CCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC
Q 012386 318 IPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGE 397 (465)
Q Consensus 318 ~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~ 397 (465)
. + .+ ...+++. ++..+..|..++++++++++.+|+++++.++|
T Consensus 192 ~--------------~--~~---~~~v~~~-----------a~~gd~~a~~i~~~~~~~L~~~i~~l~~~l~p------- 234 (289)
T 2aa4_A 192 A--------------G--AD---AKTIFTR-----------AGQGDEQAQQLIHRSARTLARLIADIKATTDC------- 234 (289)
T ss_dssp T--------------T--CC---HHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC-------
T ss_pred c--------------C--CC---HHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC-------
Confidence 0 0 01 2223332 56678899999999999999999999999999
Q ss_pred CceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHHHH
Q 012386 398 KQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLA 453 (465)
Q Consensus 398 ~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~A 453 (465)
+ .|+++|++. ..+.|.+.+++.+++...+ ..+.++.+ +|++.+|||.++
T Consensus 235 -~--~ivlgG~~~-~~~~~~~~l~~~l~~~~~~---~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 235 -Q--CVVVGGSVG-LAEGYLALVETYLAQEPAA---FHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp -S--EEEEEHHHH-TSTTHHHHHHHHHTTSCGG---GCCEEEECSCSSCHHHHHHHHHH
T ss_pred -C--EEEEeCccc-ccHHHHHHHHHHHHHhcCc---cCCEEEECCCCCchHHHHHHHHH
Confidence 4 588999998 6799999999998875322 24556554 789999999876
|
| >2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.7e-23 Score=203.63 Aligned_cols=265 Identities=18% Similarity=0.219 Sum_probs=187.2
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
++|+||+|||++|++++++.|+ ++.+. +++.| .+.+++++.|.+.+. + .+...+|++
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~---il~~~--~~~~~-----~~~~~~~~~i~~~i~----~---------~~i~gigi~ 61 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGK---ILDKT--SISTP-----ENLEDLLAWLDQRLS----E---------QDYSGIAMS 61 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCC---EEEEE--EECCC-----SSHHHHHHHHHHHHT----T---------SCCSEEEEE
T ss_pred EEEEEEECCCEEEEEEECCCCC---EEEEE--EEeCC-----CCHHHHHHHHHHHHH----h---------CCCcEEEEE
Confidence 4899999999999999999884 66443 34444 245566665554443 2 136789999
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccc--cCCceEEEEEEcc
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY--HNKDAIAAVILGT 253 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y--~~~~~~iglIlGT 253 (465)
+|+|++.. ++.+...+ +++++.+.|+.+.| +.+ ++|| .+.||++++++++.+ .+.++.+.+++||
T Consensus 62 ~pG~vd~~---~g~v~~~~---~~~~~~~~~l~~~l-~~~---~~pv---~v~NDa~aaa~~e~~~~~~~~~~v~l~~Gt 128 (292)
T 2gup_A 62 VPGAVNQE---TGVIDGFS---AVPYIHGFSWYEAL-SSY---QLPV---HLENDANCVGLSELLAHPELENAACVVIGT 128 (292)
T ss_dssp ESSEECTT---TCBEESCC---SSGGGSSSBHHHHT-GGG---CCCE---EEEEHHHHHHHHHHHHCTTCSSEEEEEESS
T ss_pred ecCcccCC---CCEEEecC---CCCcccCCCHHHHH-HHc---CCCE---EEechHHHHHHHHHHhcCCCCeEEEEEECC
Confidence 99999752 23322111 12223368999999 877 8996 999999999999976 4567899999999
Q ss_pred ccceeEEccCCCCcccCC---CC-----CCC--CceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccC
Q 012386 254 GTNAAYVERAHAIPKWHG---LL-----PKS--GEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILR 323 (465)
Q Consensus 254 G~Na~yie~~~~i~k~~~---~~-----~~~--g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~ 323 (465)
|++++++.+++.+.+.++ ++ +++ +.-|+|.++|+..|-+.++. .. +. + .++
T Consensus 129 GiG~giv~~G~l~~G~~g~aGEiGh~~~~~~~~~~gcle~~~s~~~l~~~~~~---~~--------~~-~-------~~~ 189 (292)
T 2gup_A 129 GIGGAMIINGRLHRGRHGLGGEFGYMTTLAPAEKLNNWSQLASTGNMVRYVIE---KS--------GH-T-------DWD 189 (292)
T ss_dssp SEEEEEEETTEEECCTTSCTTCGGGCBSSCCSSSCCBHHHHHSHHHHHHHHHH---HH--------SS-C-------CCC
T ss_pred ceEEEEEECCEEEecCCCCCccceeEEeccCCCCCCcHHHhcCHHHHHHHHHH---hh--------CC-C-------CCC
Confidence 999999999887766543 21 211 23599999999887433221 11 00 0 001
Q ss_pred chhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEE
Q 012386 324 TPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVI 403 (465)
Q Consensus 324 t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V 403 (465)
...+++. ++.++..|..+++++++++|.+|+++++.++| + .|
T Consensus 190 -----------------~~~v~~~-----------a~~gd~~a~~i~~~~~~~L~~~i~~l~~~l~p--------~--~I 231 (292)
T 2gup_A 190 -----------------GRKIYQE-----------AAAGNILCQEAIERMNRNLAQGLLNIQYLIDP--------G--VI 231 (292)
T ss_dssp -----------------HHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------S--EE
T ss_pred -----------------HHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCC--------C--EE
Confidence 1222322 56677899999999999999999999999999 4 58
Q ss_pred EEecceeccchhHHHHHHHHHHHHhccCCC--ccEEEEEe---CChhHHHHHHHHH
Q 012386 404 ALDGGLFEHYTKFSACMQSTVKELLGEEVS--ETVVIEHS---NDGSGIGAALLAA 454 (465)
Q Consensus 404 ~idGsv~~~~~~f~~~l~~~l~~~~~~~~~--~~v~l~~a---~Dgs~iGAAl~Aa 454 (465)
+++|++. ..+.|.+.+++.+++....... ..+.|..+ +|++.+|||.++.
T Consensus 232 vlgG~i~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~ 286 (292)
T 2gup_A 232 SLGGSIS-QNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWL 286 (292)
T ss_dssp EEESGGG-GCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHH
T ss_pred EEeCccc-cchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHH
Confidence 8999996 4799999999999887543211 23455544 8899999998874
|
| >3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.2e-23 Score=210.17 Aligned_cols=268 Identities=15% Similarity=0.126 Sum_probs=191.0
Q ss_pred cceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHH---HHHHHHHhhCCCCCCCCCCc
Q 012386 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAA---ALAKFVATEGEGFHVSPGRQ 169 (465)
Q Consensus 93 E~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~---~I~~fl~~~~~~~~~~~~~~ 169 (465)
+.+++|++|+|||++|+++++ .|+ ++.+. .+++.+.. +.+++++.|.+ .+.+++. .+.
T Consensus 7 d~~~~lgiDIGgt~i~~~l~d-~G~---il~~~-~~~~~~~~----~~~~~l~~i~~~~~~i~~~~~----------~~i 67 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQ-GGK---EIADP-VVLPACAD----CLDKCLGNLVEGFKAIQAGLP----------EAP 67 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEE-TTE---ECSCC-EEEECCTT----CHHHHHHHHHHHHHHHHTTCS----------SCC
T ss_pred CCCEEEEEEECcceEEEEEEE-CCE---EEEEE-EEEECCCC----CHHHHHHHHHHHHHHHHHHhh----------cCC
Confidence 356899999999999999999 774 54321 13444432 67888888888 5555432 247
Q ss_pred ceeeeeeecccccccCCceEEeccCCccccCCCC-CCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccC------
Q 012386 170 RELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTV-GEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN------ 242 (465)
Q Consensus 170 ~~lG~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~-g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~------ 242 (465)
..+|+++|+|++.. ++.+..-+ +++++. |.|+.+.|++.| ++|| .|.||+++.++++++.+
T Consensus 68 ~gIGIavPG~Vd~~---~G~i~~~~---nlp~w~~~~~l~~~L~~~~---g~PV---~veNDanaaAlgE~~~G~~p~~~ 135 (366)
T 3mcp_A 68 VAISFAFPGPADYQ---AGIIGDLP---NFPSFRGGVALGPFLEDIF---GIPV---FINNDGSLFAYGEALTGVLPEIN 135 (366)
T ss_dssp CEEEEECCSSEETT---TTEECCCT---TCGGGTTCBCHHHHHHHHH---CSCE---EEECHHHHHHHHHHHTSHHHHHH
T ss_pred eEEEEEecceEeCC---CCEEEeCC---CcccccCCCCHHHHHHHHH---CCCE---EEechhhHHHHHHHHhCCCcccc
Confidence 88999999999752 34443222 344555 799999999999 9996 99999999999998754
Q ss_pred -----------CceEEEEEEccccceeEEccCCCCcccCC---CC---C-CCCc-eeeeehhccccHHHHHHHHHHHHhh
Q 012386 243 -----------KDAIAAVILGTGTNAAYVERAHAIPKWHG---LL---P-KSGE-MIFEKIISGMYLGEIVRRVLCRMAE 303 (465)
Q Consensus 243 -----------~~~~iglIlGTG~Na~yie~~~~i~k~~~---~~---~-~~g~-~~fEkm~SG~YLGEi~R~~l~~~~~ 303 (465)
.++.+.+.+|||++++++.+++.+.+.++ ++ + .+|. -|+|.++|+..|-+..+...
T Consensus 136 ~~l~~~g~~~~~~~~v~l~lGtGIG~givi~G~l~~G~~g~AGEiGH~~~~CG~~GclE~~~S~~al~~~~~~~~----- 210 (366)
T 3mcp_A 136 RRLREAGSTKRYKNLLGVTLGTGFGAGVVIDGELLRGDNAAGGYVWCLRNKKYPEYIVEESVSIRAVMRVYAERS----- 210 (366)
T ss_dssp HHHHHTTCCCCCCEEEEEEESSSEEEEEEETTEECCCTTSCTTCCTTSBCSSCTTSBGGGTSSHHHHHHHHHHHS-----
T ss_pred cccccccccCCCCcEEEEEECCcceEEEEECCEEecCCCCCCceeecccCCCCCCcceeeeecHHHHHHHHHHhh-----
Confidence 57899999999999999999988877654 22 2 2233 39999999999954433210
Q ss_pred cccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHH---HHH-HHHHHHHHHHHHHHHH
Q 012386 304 EANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRK---LVV-ELCDIVATRGARLSAA 379 (465)
Q Consensus 304 ~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~---~~~-~ia~~V~~RaA~l~aa 379 (465)
+ . + ..++ ..++++. ++ .++ ..|..+++++++++|.
T Consensus 211 -----~-~-~------~~~~-----------------~~~i~~~-----------a~~~~~gD~~~a~~~l~~~~~~Lg~ 249 (366)
T 3mcp_A 211 -----G-D-A------GART-----------------PKEIFEI-----------AEGIRPGNREAAIAAFEELGEMAGD 249 (366)
T ss_dssp -----S-C-C------SCCC-----------------HHHHHHH-----------HHTSSCSCHHHHHHHHHHHHHHHHH
T ss_pred -----C-C-C------CCCC-----------------HHHHHHH-----------HhhhhcCCHHHHHHHHHHHHHHHHH
Confidence 0 0 0 0011 1222222 34 556 8899999999999999
Q ss_pred HHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHH
Q 012386 380 GIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIG 448 (465)
Q Consensus 380 giaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iG 448 (465)
+|+++++.++| .|.++|++....+.|.+.+++.+++.+.+.....+.+..+ +.....+
T Consensus 250 ~i~nl~~~ldP-----------~IviGGgi~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~s~~~~~~~~~~ 310 (366)
T 3mcp_A 250 ALASAITLIDG-----------LIVIGGGLSGASKYILPVLLKEMNAQTGMMDGARFGRLQKEVYDLDEEKS 310 (366)
T ss_dssp HHHHHHHHHCS-----------EEEEESGGGGGHHHHHHHHHHHHHHHTTCC--------CCEEEETTSHHH
T ss_pred HHHHHHHHHCC-----------EEEEEChhhhchHHHHHHHHHHHHHhcchhccCCceEEEeecCCchhHHH
Confidence 99999999986 5889999999999999999999999887655567777655 4444443
|
| >1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-22 Score=202.03 Aligned_cols=268 Identities=16% Similarity=0.193 Sum_probs=178.7
Q ss_pred ceeEEEEEeCCceEEEEEEEe-cCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCccee
Q 012386 94 KGLFYALDLGGTNFRVLRVQL-GGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (465)
Q Consensus 94 ~G~~LaiDlGGTNlRv~~V~l-~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (465)
.+++|++|+||||+|++++++ +|. ++.+. +++. . ..+.+ .+.|.+++++.+ .+...+
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g~---i~~~~--~~~~--~----~~~~~----~~~i~~~~~~~~-------~~i~gi 70 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASGE---ISQAK--TYSG--L----DYPSL----EAVIRVYLEEHK-------VEVKDG 70 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTCC---EEEEE--EEEG--G----GCSCH----HHHHHHHHHHSC-------CCCCEE
T ss_pred CCEEEEEEechhheEEEEEECCCCc---EEEEE--EecC--C----CcCCH----HHHHHHHHHhcC-------CCccEE
Confidence 468999999999999999997 463 55332 3332 2 12223 344555665543 136789
Q ss_pred eeeeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCC-eeEEEEEechHHHhhccccc----------
Q 012386 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLD-MRVAALVNDTIGTLAGGRYH---------- 241 (465)
Q Consensus 173 G~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~-v~v~alvNDtvatlla~~y~---------- 241 (465)
|+++|+|++...+.. +.+.|. .+ .+.|++.| ++| | .|.||+++.++++.+.
T Consensus 71 gi~~pG~vd~~~~~~-~nl~w~----------~~-~~~l~~~~---~~p~V---~v~NDanaaalgE~~~~~~~~~~~g~ 132 (332)
T 1sz2_A 71 CIAIACPITGDWVAM-TNHTWA----------FS-IAEMKKNL---GFSHL---EIINDFTAVSMAIPMLKKEHLIQFGG 132 (332)
T ss_dssp EEEESSCCCSSEECC-SSSCCC----------EE-HHHHHHHH---TCSEE---EEEEHHHHHHHHGGGCCGGGEEECSS
T ss_pred EEEEeCceeCCEEee-eCCCCc----------CC-HHHHHHHh---CCCcE---EEEeCHhHHhccccccChhhheecCC
Confidence 999999997322211 122442 56 57888888 898 7 9999999999999863
Q ss_pred ----CCceEEEEEEccccceeEEccCCCCcccCC---C-----CCCC---------------CceeeeehhccccHHHHH
Q 012386 242 ----NKDAIAAVILGTGTNAAYVERAHAIPKWHG---L-----LPKS---------------GEMIFEKIISGMYLGEIV 294 (465)
Q Consensus 242 ----~~~~~iglIlGTG~Na~yie~~~~i~k~~~---~-----~~~~---------------g~~~fEkm~SG~YLGEi~ 294 (465)
+.++.+.+++|||++++++.+++ .++++ + +.+. |.-|+|.++||..|-+..
T Consensus 133 g~~~~~~~~~~v~~GTGiG~giv~~g~--~G~~g~agE~GH~~v~~~~~~~~~l~~~~c~~~g~gclE~~~S~~~l~~~~ 210 (332)
T 1sz2_A 133 AEPVEGKPIAVYGAGTGLGVAHLVHVD--KRWVSLPGEGGHVDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLY 210 (332)
T ss_dssp CCCCTTCCEEEEEESSSEEEEEEEEET--TEEEEEECCGGGSBCCCCSHHHHHHHHHHHHHSSSCBGGGTSSHHHHHHHH
T ss_pred CCCCCCCcEEEEEcCccceEEEEecCC--CCeeeCCCCccccCcCCCChHHHHHHHHHHhccCCcchhhhccHHHHHHHH
Confidence 44789999999999999999876 44432 2 1222 233999999999996655
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHH-HHHHHHHHHHH
Q 012386 295 RRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLV-VELCDIVATRG 373 (465)
Q Consensus 295 R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~-~~ia~~V~~Ra 373 (465)
+..... . +.. +..+ ....+++. ++.+ +..|..+++++
T Consensus 211 ~~~~~~---~--------~~~---~~~~-----------------~~~~i~~~-----------a~~G~D~~A~~~~~~~ 248 (332)
T 1sz2_A 211 RAIVKA---D--------NRL---PENL-----------------KPKDITER-----------ALADSCTDCRRALSLF 248 (332)
T ss_dssp HHHHHH---T--------TCC---CCCC-----------------CHHHHHHH-----------HHHTCCHHHHHHHHHH
T ss_pred HHHhhc---c--------CCC---ccCC-----------------CHHHHHHH-----------HHcCCCHHHHHHHHHH
Confidence 432211 0 000 0001 12233333 6778 89999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceecc-chhHH-HHHHHHHHH--HhccC-CCccEEEEEeCChhHHH
Q 012386 374 ARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEH-YTKFS-ACMQSTVKE--LLGEE-VSETVVIEHSNDGSGIG 448 (465)
Q Consensus 374 A~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~-~~~f~-~~l~~~l~~--~~~~~-~~~~v~l~~a~Dgs~iG 448 (465)
++++|.+|+++++.++| +. -|+++||+... .+.|. +.+++.+++ .+... ....+.+...+|++++|
T Consensus 249 ~~~Lg~~i~~l~~~l~P--------~~-gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~a~l~G 319 (332)
T 1sz2_A 249 CVIMGRFGGNLALNLGT--------FG-GVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLG 319 (332)
T ss_dssp HHHHHHHHHHHHHHHTC--------TT-EEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEECCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHCC--------Ce-EEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEEECCchhHHH
Confidence 99999999999999999 31 27899999886 44444 357777654 11110 11235555568999999
Q ss_pred HHHHHH
Q 012386 449 AALLAA 454 (465)
Q Consensus 449 AAl~Aa 454 (465)
||.++.
T Consensus 320 Aa~l~~ 325 (332)
T 1sz2_A 320 SGAHLR 325 (332)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998864
|
| >2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=9.2e-22 Score=198.77 Aligned_cols=299 Identities=14% Similarity=0.164 Sum_probs=189.0
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCC-Ccceeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPG-RQRELGF 174 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~-~~~~lG~ 174 (465)
++|+||+|||++|++++++.|+ ++.+. ..+ |......+.+++++.|++.|.+++++.+... . +...+|+
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~---i~~~~--~~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~----~~~i~gigi 76 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGK---ILAEA--DGL-STNHWLIGTDKCVERINEMVNRAKRKAGVDP----LVPLRSLGL 76 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSC---EEEEE--EEC-CCCHHHHCHHHHHHHHHHHHHHHHHHHTCCT----TCCBSEEEE
T ss_pred EEEEEEcCccceEEEEEeCCCC---EEEEE--eCC-CCCcccCCHHHHHHHHHHHHHHHHHhcCCCc----ccceeEEEE
Confidence 7899999999999999999884 65433 221 2221113578899999999999998765321 3 4788999
Q ss_pred eeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCCceEEEEEEccc
Q 012386 175 TFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTG 254 (465)
Q Consensus 175 tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG 254 (465)
+.|+|++.. .+.++.+.|++.+...++|| .|.||+++++++ .| .++.+.+++|||
T Consensus 77 ~~pG~vd~~-------------------~~~~l~~~l~~~~~~~~~pv---~v~NDa~aaa~a-~~--~~~~v~v~~GTG 131 (347)
T 2ch5_A 77 SLSGGDQED-------------------AGRILIEELRDRFPYLSESY---LITTDAAGSIAT-AT--PDGGVVLISGTG 131 (347)
T ss_dssp EETTTTCHH-------------------HHHHHHHHHHHHCTTSBSCE---EEEEHHHHHHHH-HC--SSCEEEEEESSS
T ss_pred eccCCCchH-------------------HHHHHHHHHHHhcCCCCceE---EEECcHHHHHHh-hC--CCCcEEEEEcCC
Confidence 999999753 13567777777761111775 999999999999 44 367899999999
Q ss_pred cceeEEccCCCCcccCCCCCCCCce-eeee-hhccccHHHHHHHHHHHHhhcccCCCCCCCCC-----CCC----CCccC
Q 012386 255 TNAAYVERAHAIPKWHGLLPKSGEM-IFEK-IISGMYLGEIVRRVLCRMAEEANFFGDTVPPK-----LKI----PFILR 323 (465)
Q Consensus 255 ~Na~yie~~~~i~k~~~~~~~~g~~-~fEk-m~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~-----l~~----~~~l~ 323 (465)
++++++.+.. .....|.. |+|- ..||.|++............ + ..+.. |.. .+.++
T Consensus 132 ig~~~v~~~G-------~~c~cG~~G~l~~de~s~~~i~~~~~~~~~~~~d-g-----~~~~~~~~~~l~~~~~~~~g~~ 198 (347)
T 2ch5_A 132 SNCRLINPDG-------SESGCGGWGHMMGDEGSAYWIAHQAVKIVFDSID-N-----LEAAPHDIGYVKQAMFHYFQVP 198 (347)
T ss_dssp EEEEEECTTS-------CEEEEECCCTTTCCTTSHHHHHHHHHHHHHHHHH-T-----SSCCSSCCHHHHHHHHHHHTCS
T ss_pred ceeEEEcCCC-------CEEecCCcCcccCCCccHHHHHHHHHHHHHHHHh-C-----CCCCCCCccHHHHHHHHHhCCC
Confidence 9998875321 11112222 7776 78888987543332221111 1 11100 000 00000
Q ss_pred c-h-hhhhcccCCC-cCHH-HHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCc
Q 012386 324 T-P-HMSAMHHDTS-PDLR-VVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQ 399 (465)
Q Consensus 324 t-~-~ls~i~~d~s-~~~~-~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~ 399 (465)
+ . .+..+..+.+ .++. ....+++. ++.++..|..+++++++++|.+|+++++.++|... ...+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~-----------a~~gD~~a~~il~~~~~~La~~i~~l~~~~~p~~~--~~~~ 265 (347)
T 2ch5_A 199 DRLGILTHLYRDFDKCRFAGFCRKIAEG-----------AQQGDPLSRYIFRKAGEMLGRHIVAVLPEIDPVLF--QGKI 265 (347)
T ss_dssp SHHHHHTTTTTTCCHHHHHTTHHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHGGGSCGGGG--CSTT
T ss_pred CHHHHHHHHhcCCcHHHHHHHHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccccc--ccCC
Confidence 0 0 0000000000 0000 02223332 56788999999999999999999999999998300 0001
Q ss_pred eEEEEEecceeccchhHHHHHHHHHHHHhc-cCC--CccEEEEEeCChhHHHHHHHHHH
Q 012386 400 KSVIALDGGLFEHYTKFSACMQSTVKELLG-EEV--SETVVIEHSNDGSGIGAALLAAS 455 (465)
Q Consensus 400 ~~~V~idGsv~~~~~~f~~~l~~~l~~~~~-~~~--~~~v~l~~a~Dgs~iGAAl~Aa~ 455 (465)
...|+++||+++..|.|.+.+++.+++... +.. ...|.+....+++.+|||.++.-
T Consensus 266 ~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~a~~~GAa~la~~ 324 (347)
T 2ch5_A 266 GLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSALGGASLGAR 324 (347)
T ss_dssp CEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEESSCTHHHHHHHHHH
T ss_pred CceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEecCCChHHHHHHHHHH
Confidence 246889999999999999999999988742 111 12344433456999999988753
|
| >2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi} | Back alignment and structure |
|---|
Probab=99.88 E-value=5e-22 Score=203.40 Aligned_cols=272 Identities=15% Similarity=0.054 Sum_probs=188.4
Q ss_pred eeEEEEEeCCceEEEEEEEe----cCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcc
Q 012386 95 GLFYALDLGGTNFRVLRVQL----GGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170 (465)
Q Consensus 95 G~~LaiDlGGTNlRv~~V~l----~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~ 170 (465)
+++|++|+|||++|++++++ .| +++.+. + ..|. .+.+++++.|.+.++++..... .+..
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~~~~~~g---~il~~~--~-~~~~----~~~~~~~~~i~~~i~~~~~~~~-------~~i~ 91 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVREGKNDSV---HACVTR--Y-SMKR----KDITEIIEFFNEIIELMPASVM-------KRVK 91 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEECGGGCE---EEEEEE--E-ECTT----CBGGGHHHHHHHHHHHSCHHHH-------TTEE
T ss_pred CeEEEEEEccccEEEEEEecccCCCc---cEEEEe--e-ecCC----CCHHHHHHHHHHHHHHHhhccc-------cccc
Confidence 47999999999999999999 66 355433 1 1333 2577888888888877644321 2367
Q ss_pred eeeeeeecccccccCCceEEeccCCccccCCCCCC-cHHHHHHHHHHHcCC-CeeEEEEEechHHHhhc-----------
Q 012386 171 ELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGE-DVVGELTKAMERIGL-DMRVAALVNDTIGTLAG----------- 237 (465)
Q Consensus 171 ~lG~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~-dv~~~L~~al~~~gl-~v~v~alvNDtvatlla----------- 237 (465)
.+|+++|+|++...+. ..+..|. +. |+.+++++.+ ++ || .|.||+++++++
T Consensus 92 gigi~~pG~vd~g~v~-~~~~~~~---------~~~~l~~~l~~~~---~~~pv---~v~NDa~aaalge~~l~~~~~~~ 155 (373)
T 2q2r_A 92 AGVINVPGPVTGGAVG-GPFNNLK---------GIARLSDYPKALF---PPGHS---AILNDLEAGGFGVLAVSDAHVFS 155 (373)
T ss_dssp EEEEEESSCEETTTEE-CCCSSSB---------SCEEGGGSCTTTS---CTTSE---EEEEHHHHHHHHHHHHHHTTCHH
T ss_pred EEEEEeeccccCCEEe-ccCCCCC---------CcCCHHHHHHHhc---CCCCE---EEEccHhHHhccccccChhhhcc
Confidence 8999999999762111 1133454 54 7877777666 77 86 999999999999
Q ss_pred ----cccc----------------CCceEEEEEEccccceeEEccCCCCcccCC---C-----CCCCC------------
Q 012386 238 ----GRYH----------------NKDAIAAVILGTGTNAAYVERAHAIPKWHG---L-----LPKSG------------ 277 (465)
Q Consensus 238 ----~~y~----------------~~~~~iglIlGTG~Na~yie~~~~i~k~~~---~-----~~~~g------------ 277 (465)
+.+. +.++.+.+++|||++++++.+++.+.++++ + +++.+
T Consensus 156 ~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTGiG~gii~~g~l~~G~~~~aGE~Gh~~~~~~~~c~cg~~l~~~~ 235 (373)
T 2q2r_A 156 EYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTGLGSSLIYYNPPMNQHIVVPLELGSQTLPMRKDIDYIQTLHAEL 235 (373)
T ss_dssp HHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSSEEEEEEEECC---CEEEEEECGGGSBCCCSSCHHHHHHHHHHH
T ss_pred ccchhhcccccccccccCCCcCcCCCCCEEEEEeCCceeEEEEecCcccCCCcccccccceeecCCCCCcchhHHHHHHh
Confidence 5653 347899999999999999999887766543 2 22222
Q ss_pred --ceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCC
Q 012386 278 --EMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTS 355 (465)
Q Consensus 278 --~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~ 355 (465)
.-|+|.++||..|-++.+... . +. ++ ..+ ...+++.
T Consensus 236 ~~~g~lE~~~S~~~l~~~~~~~~----~------~~-~~------~~~-----------------~~~i~~~-------- 273 (373)
T 2q2r_A 236 KLFPNYENMVSGAGLEFHYRQVV----R------GS-RP------PCS-----------------AGEIAKL-------- 273 (373)
T ss_dssp TSCCBHHHHSSHHHHHHHHHHHH----T------TS-SC------CCC-----------------HHHHHHH--------
T ss_pred hccccHhHhcCHHHHHHHHHHHh----c------CC-CC------CCC-----------------HHHHHHH--------
Confidence 359999999999965443311 0 00 10 001 1223332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHH--HHHHHHHHHhccCC-
Q 012386 356 LKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSA--CMQSTVKELLGEEV- 432 (465)
Q Consensus 356 ~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~--~l~~~l~~~~~~~~- 432 (465)
++..+..|..+++++++++|.+++++++.++| + .|.++||.....+.|.+ .+++.+++.+.+..
T Consensus 274 ---a~~gD~~a~~~l~~~~~~L~~~i~~l~~~l~p--------~--~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~ 340 (373)
T 2q2r_A 274 ---ASEGDANACKAMKKYHEYLMRVGSEASMALLP--------L--TIVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEM 340 (373)
T ss_dssp ---HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------S--EEEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGG
T ss_pred ---HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------C--EEEEeCChHhCchhhhcchhHHHHHHHHHhhccc
Confidence 56678899999999999999999999999999 4 58888884444488999 88888887654321
Q ss_pred -----CccEEEEEe---CChhHHHHHHHHH
Q 012386 433 -----SETVVIEHS---NDGSGIGAALLAA 454 (465)
Q Consensus 433 -----~~~v~l~~a---~Dgs~iGAAl~Aa 454 (465)
...+.+..+ +|++.+|||.++.
T Consensus 341 ~~~~~~~~~~i~~~~~~~~a~l~GAa~l~~ 370 (373)
T 2q2r_A 341 ERFGFQSRVSYLRQKKLLNLNLMGCYRCGL 370 (373)
T ss_dssp GGGTSGGGCEEEEECSCCCHHHHHHHHHHH
T ss_pred chhhhhcCCcEEEEecCCchhHHHHHHHHH
Confidence 124555544 7999999998763
|
| >1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.86 E-value=5.5e-21 Score=186.81 Aligned_cols=245 Identities=16% Similarity=0.225 Sum_probs=170.2
Q ss_pred CCcceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcc
Q 012386 91 GDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170 (465)
Q Consensus 91 G~E~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~ 170 (465)
..+..++|+||+|||++|++++++.+. .++... ..++.|.. .+.+++++.|.+.+++++++.... ....
T Consensus 8 ~~~~~~~lgidiggt~i~~~l~dl~~g--~i~~~~-~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~~~-----~~~~ 76 (267)
T 1woq_A 8 SHKNAPLIGIDIGGTGIKGGIVDLKKG--KLLGER-FRVPTPQP---ATPESVAEAVALVVAELSARPEAP-----AAGS 76 (267)
T ss_dssp ---CCCEEEEEECSSEEEEEEEETTTT--EEEEEE-EEEECCSS---CCHHHHHHHHHHHHHHHHTSTTCC-----CTTC
T ss_pred cCCCCEEEEEEECCCEEEEEEEECCCC--eEEEEE-EecCCCcc---CCHHHHHHHHHHHHHHHHHhcccc-----Cccc
Confidence 344557999999999999999999732 354221 24455432 357889999999999987643210 1235
Q ss_pred eeeeeeecccccccCCceEEeccCCccccC-CCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc----CCc-
Q 012386 171 ELGFTFSFPVRQTSIASGDLIKWTKGFSIE-DTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKD- 244 (465)
Q Consensus 171 ~lG~tfSfPv~q~~i~~g~Li~wtKgF~~~-~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~----~~~- 244 (465)
.+|+++|+|++. +.++ ++- +++ ++.+.|+.+.|++.+ ++|| .+.||++++++++.+. +.+
T Consensus 77 ~igi~~pG~v~~-----g~v~-~~~--~l~~~w~~~~l~~~l~~~~---~~pV---~v~NDanaaalaE~~~g~~~~~~~ 142 (267)
T 1woq_A 77 PVGVTFPGIIQH-----GVVH-SAA--NVDKSWLNTDIDALLTARL---GRPV---EVINDADAAGLAEARYGAGAGVKG 142 (267)
T ss_dssp CEEEEESSCEET-----TEEC-CCT--TSCGGGTTCBHHHHHHHHH---TSCE---EEEEHHHHHHHHHHHHSTTTTCCS
T ss_pred eEEEEccceEcC-----CEEE-eCC--CCCCCCCCCCHHHHHHHHH---CCCE---EEeehhHHHHHHHHHhCCCCCCCC
Confidence 799999999972 3332 111 121 344799999999999 8996 9999999999999874 233
Q ss_pred eEEEEEEccccceeEEccCCCCcccCCCC---CCCCceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCc
Q 012386 245 AIAAVILGTGTNAAYVERAHAIPKWHGLL---PKSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFI 321 (465)
Q Consensus 245 ~~iglIlGTG~Na~yie~~~~i~k~~~~~---~~~g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~ 321 (465)
..+.+++|||++++++.+++.+.+ +++ +.++ .|+|.++|+..+-+ .
T Consensus 143 ~~~~l~~GtGIG~giv~~G~l~~G--gEiGh~~v~~-~~lE~~~S~~~l~~-----------~----------------- 191 (267)
T 1woq_A 143 TVLVITLGTGIGSAFIFDGKLVPN--AELGHLEIDG-HDAETKASAVARER-----------D----------------- 191 (267)
T ss_dssp EEEEEEESSSEEEEEEETTEEETT--CCGGGCEETT-EEHHHHHSHHHHHH-----------T-----------------
T ss_pred cEEEEEECcceEEEEEECCEEccC--ceeeeEEecC-ccHHHHhCHHHHhh-----------c-----------------
Confidence 578999999999999998876654 221 1111 25677666654310 0
Q ss_pred cCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceE
Q 012386 322 LRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKS 401 (465)
Q Consensus 322 l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~ 401 (465)
...+++++++++.+|+++++.++| +
T Consensus 192 ---------------------------------------------~~~~~~~~~~l~~~l~~l~~~ldP--------~-- 216 (267)
T 1woq_A 192 ---------------------------------------------GLSWDEYSVLLQRYFSHVEFLFSP--------E-- 216 (267)
T ss_dssp ---------------------------------------------TCCHHHHHHHHHHHHHHHHHHHCC--------S--
T ss_pred ---------------------------------------------chhHHHHHHHHHHHHHHHHHHcCC--------C--
Confidence 001356778899999999999999 4
Q ss_pred EEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHHHHHHhcc
Q 012386 402 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLAASHSQ 458 (465)
Q Consensus 402 ~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~Aa~~~~ 458 (465)
.|+++|++....+.|.+.++ ..+.+..+ +|++.+|||.++....+
T Consensus 217 ~IvlgG~i~~~~~~~~~~~~------------~~~~i~~s~l~~~a~~~GAa~l~~~~~~ 264 (267)
T 1woq_A 217 LFIVGGGISKRADEYLPNLR------------LRTPIVPAVLRNEAGIVGAAIEIALQHK 264 (267)
T ss_dssp EEEEESGGGGGGGGTGGGCC------------CSSCEEECSCSTTHHHHHHHHHHHHHC-
T ss_pred EEEEeChhhcccHHHHHhhc------------cCceEEECCcCCcHHHHHHHHHHHhccc
Confidence 68899999998888776654 12345544 89999999998865443
|
| >2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.5e-19 Score=176.43 Aligned_cols=261 Identities=15% Similarity=0.145 Sum_probs=169.6
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
++|+||+|||++|+++++++|+ ++.+. +++.|.. ...+.+++++.|.+.+.+++.+. ...+|++
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~---i~~~~--~~~~~~~-~~~~~~~~~~~i~~~i~~~~~~~----------~~~igi~ 66 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGN---FIGEG--SSGPGNY-HNVGLTRAIENIKEAVKIAAKGE----------ADVVGMG 66 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSC---EEEEE--EESCCCH-HHHCHHHHHHHHHHHHHHHHTSC----------CSEEEEE
T ss_pred EEEEEEeCCCcEEEEEEcCCCC---EEEEE--eCCCCCc-ccCCHHHHHHHHHHHHHHHHhcC----------CCEEEEE
Confidence 5899999999999999999874 66443 3444321 01357889999999998886431 3578999
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCCceEEEEEEcccc
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGT 255 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~ 255 (465)
+|+| +... +. .++.+.|++ + ++|| .+.||++++++++.+ .++.+.+++|||+
T Consensus 67 ~~G~-~~~~---~~---------------~~l~~~l~~-~---~~pv---~v~ND~~aaa~~e~~--~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 67 VAGL-DSKF---DW---------------ENFTPLASL-I---APKV---IIQHDGVIALFAETL--GEPGVVVIAGTGS 118 (299)
T ss_dssp ETTC-CSHH---HH---------------HHHHHHHTT-S---SSEE---EEEEHHHHHHHHHHT--TSCEEEEEESSSE
T ss_pred cCCC-Cchh---HH---------------HHHHHHHHh-C---CCCE---EEeCcHHHHHhhccC--CCCeEEEEecCCE
Confidence 9999 6421 11 356666666 5 6775 899999999999976 5678999999994
Q ss_pred ceeEEccCCCCcccCC---C----CCCCCc------e-------eeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCC
Q 012386 256 NAAYVERAHAIPKWHG---L----LPKSGE------M-------IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPK 315 (465)
Q Consensus 256 Na~yie~~~~i~k~~~---~----~~~~g~------~-------~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~ 315 (465)
++ .+. +.+..+ + ...+|. . |+|.++|+..|-+.++. .+ +...+..
T Consensus 119 ---i~-~g~-~~G~~~~aGE~Gh~~~~~g~~c~cG~~gl~~~~~~le~~~s~~~l~~~~~~---~~-------~~~~~~~ 183 (299)
T 2e2o_A 119 ---VV-EGY-NGKEFLRVGGRGWLLSDDGSAYWVGRKALRKVLKMMDGLENKTILYNKVLK---TI-------NVKDLDE 183 (299)
T ss_dssp ---EE-EEE-CSSCEEEEECSCTTTCCTTSHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHH---HT-------TCCSHHH
T ss_pred ---EE-EEE-cCCeEEecCCcCCCcCCCccHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHH---Hh-------CCCCHHH
Confidence 11 121 222211 1 111221 1 78888888887443322 11 0000000
Q ss_pred CCCCCccCchhhhhccc-CCC-cCH-HHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 012386 316 LKIPFILRTPHMSAMHH-DTS-PDL-RVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDT 392 (465)
Q Consensus 316 l~~~~~l~t~~ls~i~~-d~s-~~~-~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~ 392 (465)
+ +..+.. +.. .++ .....+++. ++.++..|..+++++++++|.+|+++++.++|
T Consensus 184 l----------~~~~~~~~~~~~~~~~~~~~v~~~-----------a~~gd~~a~~il~~~~~~La~~i~~l~~~l~p-- 240 (299)
T 2e2o_A 184 L----------VMWSYTSSCQIDLVASIAKAVDEA-----------ANEGDTVAMDILKQGAELLASQAVYLARKIGT-- 240 (299)
T ss_dssp H----------HHHHHHHTTCHHHHHTTHHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred H----------HHHHHcCCCCHHHHHHHHHHHHHH-----------HhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC--
Confidence 0 000000 000 000 012223322 56788999999999999999999999999998
Q ss_pred cCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHHH
Q 012386 393 VRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAA 454 (465)
Q Consensus 393 ~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~Aa 454 (465)
+ .|+++||+... +.|.+.+++.+++. .+.....++++.+|||.++.
T Consensus 241 ------~--~IvlgGgv~~~-~~~~~~l~~~~~~~-------~i~~~~~~~~~~~GAa~la~ 286 (299)
T 2e2o_A 241 ------N--KVYLKGGMFRS-NIYHKFFTLYLEKE-------GIISDLGKRSPEIGAVILAY 286 (299)
T ss_dssp ------S--EEEEESGGGGS-HHHHHHHHHHHHHT-------TCEEECCSCCHHHHHHHHHH
T ss_pred ------C--EEEEECCccCc-HHHHHHHHHHCCCC-------eEeccCCCCChHHHHHHHHH
Confidence 4 58899999998 99999999988764 23221145899999998874
|
| >1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=8.1e-19 Score=180.27 Aligned_cols=277 Identities=15% Similarity=0.134 Sum_probs=179.2
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHH---HHHHHHHHHhhCCCCCCCCCCccee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYI---AAALAKFVATEGEGFHVSPGRQREL 172 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~I---a~~I~~fl~~~~~~~~~~~~~~~~l 172 (465)
++|+||+|||++|+++++++ +++.+. +++.+.... .+.+++++.+ .+.|.+++++.+... .+...+
T Consensus 3 ~vlgidiGgt~ik~al~d~~----~il~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~~~~~----~~i~gI 71 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE----RMVKMQ--NFSHSPDEL-GRFQKILDQLEFREKIARQFVEETGYSL----SSFSAF 71 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT----EEEEEE--EEECCHHHH-HTCSSGGGGHHHHHHHHHHHHHTTTCCG----GGCSEE
T ss_pred eEEEEECCccceeEEEEecc----hheeee--ecccCcccc-cchhhHHHHHHHHHHHHHHHHHHcCCCc----cCceEE
Confidence 58999999999999999963 355443 344432100 0234455666 888888887654321 346677
Q ss_pred eeeeecccccccCCceEEe-----------ccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechH---------
Q 012386 173 GFTFSFPVRQTSIASGDLI-----------KWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTI--------- 232 (465)
Q Consensus 173 G~tfSfPv~q~~i~~g~Li-----------~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtv--------- 232 (465)
+++|+|++.. +|.+. .+.+-...+.. +.++.+.|++.+ ++|| .+.||++
T Consensus 72 -i~~pG~vd~~---~G~~~~i~~~~~~~l~~~~~~~~~~nl-~~~l~~~l~~~~---~~Pv---~v~NDan~~~~~~~a~ 140 (381)
T 1saz_A 72 -VSRGGLLDPI---PGGVYLVDGLMIKTLKSGKNGEHASNL-GAIIAHRFSSET---GVPA---YVVDPVVVDEMEDVAR 140 (381)
T ss_dssp -EEECCSCSCB---CSSEEECCHHHHHHHHHTTTCCCTTHH-HHHHHHHHHHHH---CCCE---EEESCTTBCCCCGGGT
T ss_pred -EecCCCCCCC---CCceEecCHHHHHHHHhcccccChhhh-hHHHHHHHHHhc---CCCE---EEeCCCccccCcHHHH
Confidence 8999999742 22220 01100011111 467778888888 9997 7999999
Q ss_pred HHhh-----------------cc-ccc----CCc--eEEEEEEccccceeEEccCCCCcccCCCCCCCCce---------
Q 012386 233 GTLA-----------------GG-RYH----NKD--AIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM--------- 279 (465)
Q Consensus 233 atll-----------------a~-~y~----~~~--~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~~--------- 279 (465)
++.+ ++ .+. +.+ +.+.+++|||+++|.+.+++.+.+..+.-.+ |.+
T Consensus 141 aaalp~~~r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGiG~g~i~~G~~~~G~~g~agE-Gh~~~~~~g~c~ 219 (381)
T 1saz_A 141 VSGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGISIAAHRKGRVIDVNNALDGD-GPFTPERSGTLP 219 (381)
T ss_dssp BCSSTTCBCCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSEEEEEEETTEEEEECCGGGTC-SSCCSSCCCSCC
T ss_pred HcCCcchhhhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCcEEEEEECCEEEEecCCCCCC-cceeeccCCCCC
Confidence 8888 87 442 345 8999999999999999998877665442222 332
Q ss_pred -------eeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccC
Q 012386 280 -------IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEIS 352 (465)
Q Consensus 280 -------~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~ 352 (465)
|+|.++|+..|-+.+ .....+ .. .. .+.+ ..++++.
T Consensus 220 cg~l~~gc~e~~~S~~~l~~~~----------------------~~~~g~----~~-~~--~~~~---~~~i~~~----- 262 (381)
T 1saz_A 220 LTQLVDLCFSGKFTYEEMKKRI----------------------VGNGGL----VA-YL--GTSD---AREVVRR----- 262 (381)
T ss_dssp HHHHHHHHTSSCCCTTGGGSTT----------------------TTSCTH----HH-HH--SCCC---HHHHHHH-----
T ss_pred CcHHHHHHHHhCCCHHHHHHHH----------------------HhccCc----cc-cc--cCCC---HHHHHHH-----
Confidence 445544444441110 000000 00 00 0011 2233332
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhcc
Q 012386 353 NTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKL--GRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGE 430 (465)
Q Consensus 353 ~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~--~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~ 430 (465)
++.++..|..+++++++++|.+|++++..+ +| + .|+++||+.+..+.|++.+++.++.+.
T Consensus 263 ------a~~gd~~a~~~l~~~~~~la~~i~~l~~~l~~~p--------~--~IvlgGgi~~~~~~l~~~i~~~l~~~~-- 324 (381)
T 1saz_A 263 ------IKQGDEWAKRVYRAMAYQIAKWIGKMAAVLKGEV--------D--FIVLTGGLAHEKEFLVPWITKRVSFIA-- 324 (381)
T ss_dssp ------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTTCC--------S--EEEEEEGGGGCTTTHHHHHHHHHTTTS--
T ss_pred ------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--------C--EEEEeCcCccChHHHHHHHHHHHHhhc--
Confidence 456778899999999999999999999999 77 4 688999999987779999999887642
Q ss_pred CCCccEEEEEeC---ChhHHHHHHHHH
Q 012386 431 EVSETVVIEHSN---DGSGIGAALLAA 454 (465)
Q Consensus 431 ~~~~~v~l~~a~---Dgs~iGAAl~Aa 454 (465)
.+.+.+++ |++.+|||.++.
T Consensus 325 ----~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 325 ----PVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp ----CEEEEEBCCHHHHHHHHHHHHHT
T ss_pred ----CeEEEecCcchhHHHHHHHHHHc
Confidence 46677663 578999998763
|
| >3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.76 E-value=9e-19 Score=167.27 Aligned_cols=204 Identities=19% Similarity=0.218 Sum_probs=139.1
Q ss_pred cceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCccee
Q 012386 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (465)
Q Consensus 93 E~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (465)
+.++++++|+||||+|+ ++++|+ +. .+.+.|.. .+.+++.+.|.+ ++++. +...+
T Consensus 4 ~~~~~lgiDIGGT~i~~--~d~~g~---~~----~~~~t~~~---~~~~~~~~~i~~----~i~~~---------~i~gi 58 (226)
T 3lm2_A 4 EDQTVLAIDIGGSHVKI--GLSTDG---EE----RKVESGKT---MTGPEMVAAVTA----MAKDM---------TYDVI 58 (226)
T ss_dssp GGCCEEEEEECSSEEEE--EETTTC---CE----EEEECCTT---CCHHHHHHHHHH----HTTTC---------CCSEE
T ss_pred cCCEEEEEEECCCEEEE--EECCCC---EE----EEEECCCC---CCHHHHHHHHHH----HHHhC---------CCCEE
Confidence 34689999999999994 666663 32 13455543 356666666554 43321 35789
Q ss_pred eeeeecccccccCCceEEeccCCcccc-CCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCCceEEEEEE
Q 012386 173 GFTFSFPVRQTSIASGDLIKWTKGFSI-EDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVIL 251 (465)
Q Consensus 173 G~tfSfPv~q~~i~~g~Li~wtKgF~~-~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~~~~iglIl 251 (465)
|+++|+|++..+ .+ .++- ++ +++.+.|+. +.+ ++|| .+.||+++..+++.+. ++.+.+++
T Consensus 59 gi~~pG~Vd~~~----~~-~~~~--nl~~~w~~~~l~----~~~---~~pv---~v~NDanaaalge~~~--~~~~~l~~ 119 (226)
T 3lm2_A 59 AMGYPGPVVHNK----PL-REPV--NLGEGWVGYDYE----GAF---GRPV---RIVNDALMQAIGSYNG--GRMLFLGL 119 (226)
T ss_dssp EEEESSCEETTE----EC-SCCT--TSCSCCTTCCHH----HHH---TSCE---EEEEHHHHHHHHHCCS--SEEEEEEE
T ss_pred EEEEEeEEECCe----EE-EECC--cCCccccCCchH----Hhc---CCeE---EEEEHHHHHHHHHhhc--CcEEEEEe
Confidence 999999997532 11 1110 22 234467774 455 8996 9999999999999876 68999999
Q ss_pred ccccceeEEccCCCCcccCCCCCCCCceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcc
Q 012386 252 GTGTNAAYVERAHAIPKWHGLLPKSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMH 331 (465)
Q Consensus 252 GTG~Na~yie~~~~i~k~~~~~~~~g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~ 331 (465)
|||++++++.+++.+++=-+.++-...-|+|.++|+..|- |. .
T Consensus 120 GtGiG~gii~~G~l~~GEiGH~~v~~~gclE~~~s~~al~---~~-----------------------~----------- 162 (226)
T 3lm2_A 120 GTGLGAAMIVENVAQPMEIAHLPYRKGKTYEHYVSEAYRE---KK-----------------------G----------- 162 (226)
T ss_dssp SSSEEEEEEETTEEEEECCTTSEEETTEEHHHHTCHHHHH---HH-----------------------C-----------
T ss_pred CCceEEEEEECCEEeeeeeeeEEecCCCcHHHHhCHHHHH---HH-----------------------H-----------
Confidence 9999999999887655111111111113788888877661 11 0
Q ss_pred cCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceec
Q 012386 332 HDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFE 411 (465)
Q Consensus 332 ~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~ 411 (465)
-++++++++.+|+++++.++| + .|+++|++.+
T Consensus 163 --------------------------------------~~~~~~~L~~~la~l~~~~dP--------~--~IVlGG~~~~ 194 (226)
T 3lm2_A 163 --------------------------------------NAKWQKRVQDVVERLSAALEP--------D--EVVIGGGNVE 194 (226)
T ss_dssp --------------------------------------HHHHHHHHHHHHHHHHHHHCC--------S--EEEEESGGGG
T ss_pred --------------------------------------HHHHHHHHHHHHHHHHHHHCC--------C--EEEEeChhhh
Confidence 035678899999999999999 4 7889999999
Q ss_pred cchhHHHHHHHHHH
Q 012386 412 HYTKFSACMQSTVK 425 (465)
Q Consensus 412 ~~~~f~~~l~~~l~ 425 (465)
..+.|.+.+++.++
T Consensus 195 ~~~~~~~~i~~~~~ 208 (226)
T 3lm2_A 195 RLENLPPKCRRGDN 208 (226)
T ss_dssp GCCCCCTTEEECCT
T ss_pred hhhHHHHHHHHHHH
Confidence 99887766655443
|
| >1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-16 Score=159.20 Aligned_cols=267 Identities=16% Similarity=0.089 Sum_probs=156.2
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCc--ceee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ--RELG 173 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~--~~lG 173 (465)
++|+||+|||++|+++++++|+ ++.+. +.+ |... ..+.+++++.+.+.|.+++++.+... .+. ..+|
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~---il~~~--~~~-~~~~-~~~~~~~~~~l~~~i~~~l~~~~~~~----~~i~~~~ig 80 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGT---PLAMA--EGG-ASAL-SQGIAKSWQAVLSTLEAAFQQAGLPA----APASACAIG 80 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCC---EEEEE--EES-CCCG-GGCHHHHHHHHHHHHHHHHHHTTCCC----CCGGGEEEE
T ss_pred EEEEEEcCccceEEEEEcCCCC---EEEEE--eCC-CCCc-ccCHHHHHHHHHHHHHHHHHhcCCCh----hhhccceEE
Confidence 7899999999999999999874 65433 121 2222 13578899999999999998765321 233 5789
Q ss_pred eeeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCCceEEEEEEcc
Q 012386 174 FTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGT 253 (465)
Q Consensus 174 ~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGT 253 (465)
+++|+|++... |. + |++.+.+ ++|| .|.||++++++++. ..++.+.+++||
T Consensus 81 ig~pG~v~~~~--------~~-----------~----l~~~~~~-~~pv---~v~NDa~aaa~ge~--~~~~~v~v~~GT 131 (305)
T 1zc6_A 81 LGLSGVHNRQW--------AG-----------E----FESQAPG-FARL---SLATDGYTTLLGAH--GGQPGIIVALGT 131 (305)
T ss_dssp EEESCCCTTSH--------HH-----------H----HHHTCCC-CSEE---EEECHHHHHHHHHT--TTSSEEEEEESS
T ss_pred EEecCCCchHH--------HH-----------H----HHHhCCC-CceE---EEECCHHHHHHhhc--CCCCeEEEEecC
Confidence 99999987532 32 0 3332211 4564 99999999999973 346788999999
Q ss_pred ccceeEEc-cCCCCc--ccCCCCCCCCceeeeehhccccHHHHHHHHHHHHhh--cccCCCCCCCCCC----CCCCccCc
Q 012386 254 GTNAAYVE-RAHAIP--KWHGLLPKSGEMIFEKIISGMYLGEIVRRVLCRMAE--EANFFGDTVPPKL----KIPFILRT 324 (465)
Q Consensus 254 G~Na~yie-~~~~i~--k~~~~~~~~g~~~fEkm~SG~YLGEi~R~~l~~~~~--~~~lf~~~~~~~l----~~~~~l~t 324 (465)
|++++.+. ++.... +|.......| || +++.+..+..... ++.. .+..+ ...++.+.
T Consensus 132 Gigg~~i~~~G~~~~aGe~Gh~~~d~g--------~~---~~iG~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~ 196 (305)
T 1zc6_A 132 GSIGEALYPDGSHREAGGWGYPSGDEA--------SG---AWLGQRAAQLTQMALDGRH----SHSPLTRAVLDFVGGDW 196 (305)
T ss_dssp SEEEEEECTTSCEEEESCCCTTTSCTT--------SH---HHHHHHHHHHHHHHHHTSS----CCCHHHHHHHHHHTSSH
T ss_pred CeEEEEEeCCCcEEEecCcccccCCCc--------hH---HHHHHHHHHHHHHHHhCCC----CCChHHHHHHHHHCcCH
Confidence 99755555 554221 1211110111 22 3444444433211 1100 00000 00000000
Q ss_pred hhh-hhcccCCCcCHH-HHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEE
Q 012386 325 PHM-SAMHHDTSPDLR-VVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSV 402 (465)
Q Consensus 325 ~~l-s~i~~d~s~~~~-~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~ 402 (465)
..+ ..+......... ....+++ .+ .++.+|..++++++++++.+|+++++. +| + .
T Consensus 197 ~~l~~~~~~~~~~~~~~~~~~v~~-----------~a-~GD~~A~~i~~~~~~~L~~~l~~l~~~-~p--------~--~ 253 (305)
T 1zc6_A 197 QAMMAWNGRATPAQFARLAPLVLS-----------AA-RVDPEADALLRQAGEDAWAIARALDPQ-DE--------L--P 253 (305)
T ss_dssp HHHHHHHHTCCHHHHHTTHHHHHH-----------HT-TTCHHHHHHHHHHHHHHHHHHHHHCTT-CC--------S--C
T ss_pred HHHHHHHhccCHHHHHHHHHHHHH-----------Hc-CCCHHHHHHHHHHHHHHHHHHHHHhcC-CC--------C--e
Confidence 000 000000000000 0111222 14 678999999999999999999999887 77 3 5
Q ss_pred EEEecceecc-chhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHHH
Q 012386 403 IALDGGLFEH-YTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAA 454 (465)
Q Consensus 403 V~idGsv~~~-~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~Aa 454 (465)
|+++||+... .|.|.+.+++. + ...++++.+|||++|.
T Consensus 254 VvlgGgv~~~~~~~l~~~l~~~----i----------~~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 254 VALCGGLGQALRDWLPPGFRQR----L----------VAPQGDSAQGALLLLQ 292 (305)
T ss_dssp EEEESHHHHHTGGGSCHHHHHH----C----------CCCSSCHHHHHHHHTC
T ss_pred EEEECCchHhHHHHHHHHHHhh----c----------cCCCCCHHHHHHHHHh
Confidence 8899999864 55666666553 1 2246889999998863
|
| >1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5 | Back alignment and structure |
|---|
Probab=99.71 E-value=4.9e-17 Score=160.77 Aligned_cols=270 Identities=13% Similarity=0.090 Sum_probs=156.8
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
+||+||+|||++|+++++ +|+ ++.+. +.+ |.+....+.+++++.|.+.+.+.+.. . ..+...+|++
T Consensus 1 ~~lgiDiGGT~~~~~l~d-~g~---il~~~--~~~-~~~~~~~~~~~~~~~i~~~i~~~~~~---~----~~~i~~igig 66 (291)
T 1zbs_A 1 MILIGDSGSTKTDWCIAK-EGK---SLGRF--QTS-GINPFQQDRNEIDTALRSEVLPAIGQ---K----ASSIRAVYFY 66 (291)
T ss_dssp CEEEEEECSSEEEEEEEE-TTE---EEEEE--EEE-CCCTTTSCHHHHHHHHTTTTHHHHTT---S----TTTCCEEEEE
T ss_pred CEEEEEeCccceEEEEEe-CCe---EEEEE--ECC-CCCcccCCHHHHHHHHHHHHHHHhCC---C----cccccEEEEE
Confidence 379999999999999999 773 66433 222 21221235778888888888776421 1 1235678999
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCC--CeeEEEEEechHHHhhcccccCCceEEEEEEcc
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGL--DMRVAALVNDTIGTLAGGRYHNKDAIAAVILGT 253 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl--~v~v~alvNDtvatlla~~y~~~~~~iglIlGT 253 (465)
.|+|+ .. .+ .++.+.|++.+ ++ | +.|.||++++++++. +.++.+.+|+||
T Consensus 67 ~pG~~-~~---~~----------------~~l~~~l~~~~---~~~~p---v~v~NDa~~aa~ge~--g~~~~v~v~~GT 118 (291)
T 1zbs_A 67 GAGCT-PA---KA----------------PMLNEALDSML---PHCDR---IEVAGDMLGAARALC--GDSEGIACILGT 118 (291)
T ss_dssp ETTCC-TT---TH----------------HHHHHHHHHHS---TTCSE---EEEECHHHHHHHHHT--TTSCEEEEEESS
T ss_pred CCCCC-hH---HH----------------HHHHHHHHHhc---CCCCc---EEEeCcHHHHHHhhc--CCCCcEEEEecC
Confidence 99986 21 11 26777777766 53 6 499999999999984 567889999999
Q ss_pred ccceeEE-ccCCCCcccCCCCCCCCceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhccc
Q 012386 254 GTNAAYV-ERAHAIPKWHGLLPKSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHH 332 (465)
Q Consensus 254 G~Na~yi-e~~~~i~k~~~~~~~~g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~ 332 (465)
|++++.+ .+++... -+++ |.+.-.. -|| +++-+..+....+.. . +..+. ........
T Consensus 119 Gigg~~i~~~G~~~~--aGe~---G~~~~d~-g~~---~~~G~~~~~~~~~~~-----~-~~~l~------~~~~~~~~- 176 (291)
T 1zbs_A 119 GSNSCLFDGREIKAN--VSPL---GYILGDE-GSG---AVLGRLFIGSLLKGQ-----M-PEGLC------EAFLQEYG- 176 (291)
T ss_dssp SEEEEEECSSSEEEE--CCCC---HHHHCCT-TSH---HHHHHHHHHHHHTTC-----S-CTTHH------HHHHHHTT-
T ss_pred ChheEEECCCCcEEE--eCCC---ccccCCC-chH---HHHHHHHHHHHHHcc-----C-CChHH------HHHHHHhC-
Confidence 9975554 5554321 0100 1111111 122 344444443332210 0 11110 00000000
Q ss_pred CCCcCHHHHHHHH-hhhhc---cCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcCCCCCceEEEEE
Q 012386 333 DTSPDLRVVGKKL-KDILE---ISNTS--LKMRKLVVELCDIVATRGARLSAAGIVGILKKL-GRDTVRDGEKQKSVIAL 405 (465)
Q Consensus 333 d~s~~~~~~~~il-~~~~~---~~~~~--~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~-~~~~~~~~~~~~~~V~i 405 (465)
.+.......+ ....+ +.... .-+ +.++.+|..+++++++++|.+| .++.+ +| + .|++
T Consensus 177 ---~~~~~l~~~~~~~~~~~~~ia~~a~~v~~-~~GD~~A~~i~~~~~~~La~~i--~~~~~~~p--------~--~vvl 240 (291)
T 1zbs_A 177 ---LTSADIIESVYRKPFPNRFLAGFSPFIAQ-HLDIPAVYSLVQNSFDDFLVRN--VLRYNRPD--------L--PLHF 240 (291)
T ss_dssp ---CCHHHHHHHHHHSSCHHHHHHTTHHHHHT-TTTSHHHHHHHHHHHHHHHHHH--TGGGCCTT--------S--CEEE
T ss_pred ---cCHHHHHHHHHcCCCCHHHHHHhhHHHHH-hCCCHHHHHHHHHHHHHHHHHH--hcccCCCC--------c--eEEE
Confidence 0000000000 00000 00000 011 4678999999999999999999 44554 66 4 5889
Q ss_pred ecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHHHH
Q 012386 406 DGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAAS 455 (465)
Q Consensus 406 dGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~Aa~ 455 (465)
+||+++. |.+.+++.+++.. +++....++..+||+.+|.-
T Consensus 241 gGGv~~~---~~~~l~~~l~~~~-------~~i~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 241 IGSVAFH---YREVLSSVIKKRG-------LTLGSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp ESHHHHH---THHHHHHHHHHTT-------CCEEEEESCSHHHHHHHHHH
T ss_pred ECchHHh---hHHHHHHHHHHcC-------CeecccCcCHHHHHHHHHHh
Confidence 9999876 6677888777643 23445569999999999754
|
| >1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5 | Back alignment and structure |
|---|
Probab=99.70 E-value=2.6e-17 Score=162.75 Aligned_cols=262 Identities=16% Similarity=0.126 Sum_probs=143.3
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
+||+||+|||++|+++++ +|+ ++.+. +.+ |.+....+.+++++.|.+.+.+.+.. .+...+|++
T Consensus 1 ~~lgiDiGGT~i~~~l~d-~g~---il~~~--~~~-~~~~~~~~~~~~~~~i~~~i~~~~~~---------~~i~~igig 64 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL-NGA---VIKRL--GTK-GINPFFQSEEEIQQKLTASLLPQLPE---------GKFNAVYFY 64 (291)
T ss_dssp ---CEECCTTCEEEEEEC-SSS---EEEEE--EEC-CCCTTTSCSTTTTTTTTC----------------------CEEE
T ss_pred CEEEEEeccccEEEEEEc-CCe---EEEEE--ECC-CCCcccCCHHHHHHHHHHHHHHhcCc---------ccccEEEEE
Confidence 379999999999999999 774 66443 222 11111224667777777777665422 235678888
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcC--CCeeEEEEEechHHHhhcccccCCceEEEEEEcc
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG--LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGT 253 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~g--l~v~v~alvNDtvatlla~~y~~~~~~iglIlGT 253 (465)
+|+++ ... +.++.+.|++.+ + .|| .|.||++++++++. +.++.+.+|+||
T Consensus 65 ~pG~~-~~~-------------------~~~l~~~l~~~~---~~~~pv---~v~NDa~~aalge~--g~~~~v~v~~GT 116 (291)
T 1zxo_A 65 GAGCT-PEK-------------------APVLRRAIADSL---PVIGNI---KANSDMLAAAHGLC--GQKAGIACILGT 116 (291)
T ss_dssp CTTCC-TTT-------------------THHHHHHHHHHS---CCCSCC---EEECSHHHHHHHTT--TTSCBEEEEESS
T ss_pred cCCCC-HHH-------------------HHHHHHHHHHhc---CCCceE---EEECcHHHHHHhhc--CCCCcEEEEeCC
Confidence 98886 211 136777777776 6 476 99999999999985 567789999999
Q ss_pred ccc-eeEEccCCCCc--ccCCCCCCCCceeeeehhccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCC----CccCchh
Q 012386 254 GTN-AAYVERAHAIP--KWHGLLPKSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIP----FILRTPH 326 (465)
Q Consensus 254 G~N-a~yie~~~~i~--k~~~~~~~~g~~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~----~~l~t~~ 326 (465)
|++ ++++.+++... +|...+...| |+.++ -+..+....+.. . ++.|... +..+...
T Consensus 117 Gi~g~gi~~~G~~~~aGe~Gh~~~d~g--------~~~~~---G~~~~~~~~~~~-----~-~~~l~~~~~~~~~~~~~~ 179 (291)
T 1zxo_A 117 GSNSCFYNGKEIVSNISPLGFILGDEG--------SGAVL---GKLLVGDILKNQ-----L-PATLKEEFLKQFDLTPPE 179 (291)
T ss_dssp SEEEEEECSSSEEEECCCCCTTTSCCS--------SHHHH---HHHHHHHGGGTC-----S-CSHHHHHHHHHHTCCHHH
T ss_pred ChheEEECCCCcEEEeCCCccccCCCc--------hHHHH---HHHHHHHHHHcc-----C-CChHHHHHHHHhCCCHHH
Confidence 996 66665654432 2222111111 22222 222222211100 0 0000000 0000000
Q ss_pred hhh-cccCC-C-cCHH-HHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcCCCCCceE
Q 012386 327 MSA-MHHDT-S-PDLR-VVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKL-GRDTVRDGEKQKS 401 (465)
Q Consensus 327 ls~-i~~d~-s-~~~~-~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~-~~~~~~~~~~~~~ 401 (465)
+.. +.... + .++. ....+++ +.+|++|..+++++++++|.+| .++.+ +| +
T Consensus 180 l~~~~~~~~~~~~~ia~~a~~v~~-------------~~GD~~A~~i~~~~~~~La~~i--~~~~~~~p--------~-- 234 (291)
T 1zxo_A 180 IIDRVYRQPFPNRFLASLSPFIAQ-------------HLEEPAIRQLVMNSFIAFFRRN--VMQYDYKQ--------Y-- 234 (291)
T ss_dssp HGGGTTTSSCSTTTSSTTTHHHHT-------------TTTSTTTTHHHHHHHHHHHTTT--GGGSCTTT--------S--
T ss_pred HHHHHhcCCCCHHHHHHhhHHHHH-------------hCCCHHHHHHHHHHHHHHHHHH--hcccCCCC--------c--
Confidence 000 00000 0 0000 0011111 3467889999999999999999 34444 55 4
Q ss_pred EEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHH
Q 012386 402 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLA 453 (465)
Q Consensus 402 ~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~A 453 (465)
.|+++||+++. |.+.+++.+++ + .+.+..++|++.+|||.+|
T Consensus 235 ~vvlgGGv~~~---l~~~l~~~l~~---~----~~~i~~~~~a~~~GAa~la 276 (291)
T 1zxo_A 235 PVHFIGSIAYC---YKEILQDAARQ---T----GIQIGKILQSPMEGLIQYH 276 (291)
T ss_dssp CEEECSHHHHH---THHHHHHHTTT---T----TCCEEEECSCTHHHHHTTS
T ss_pred eEEEECcHHHH---HHHHHHHHHhc---C----CcEEeecCCCHHHHHHHHH
Confidence 58899999876 88888887765 1 2456677899999999875
|
| >4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A | Back alignment and structure |
|---|
Probab=97.78 E-value=0.0007 Score=65.33 Aligned_cols=26 Identities=23% Similarity=0.346 Sum_probs=21.3
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEE
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQ 124 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~ 124 (465)
+|||||+|+||.++++++.++ .++..
T Consensus 2 ~~lGID~GsT~tk~av~d~~~---~il~~ 27 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKNGE---DIVAS 27 (276)
T ss_dssp EEEEEEECSSCEEEEEEETTT---EEEEE
T ss_pred eEEEEEcCccEEEEEEEECCC---eEEEE
Confidence 589999999999999998766 36643
|
| >3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} | Back alignment and structure |
|---|
Probab=97.76 E-value=7e-05 Score=79.26 Aligned_cols=96 Identities=21% Similarity=0.216 Sum_probs=65.0
Q ss_pred cceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--C-CCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCc
Q 012386 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--P-PHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQ 169 (465)
Q Consensus 93 E~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~ 169 (465)
...++||||+|+|++|+++++.+|+ ++.+.+..++. | +.....+++++++.+.+++++++++.+... .++
T Consensus 5 ~~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~----~~I 77 (508)
T 3ifr_A 5 QGRQVIGLDIGTTSTIAILVRLPDT---VVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESD----WRP 77 (508)
T ss_dssp --CEEEEEEECSSEEEEEEEETTTE---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHCGGG----CCE
T ss_pred cCCEEEEEEecCcceEEEEECCCCC---EEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcCCCh----hhe
Confidence 3458999999999999999998774 66655333332 1 111234688999999999999998765322 457
Q ss_pred ceeeeeeec----ccccccCCceEEeccCC
Q 012386 170 RELGFTFSF----PVRQTSIASGDLIKWTK 195 (465)
Q Consensus 170 ~~lG~tfSf----Pv~q~~i~~g~Li~wtK 195 (465)
..||++... |++..+---.+.+.|..
T Consensus 78 ~~Igis~~~~~~v~~D~~G~~l~~~i~W~D 107 (508)
T 3ifr_A 78 GGICVTGMLPAVVLLDDRGAVLRPSIQQSD 107 (508)
T ss_dssp EEEEEEECSSCBEEECTTSCBCSCEECTTC
T ss_pred EEEEEECCCCcEEEECCCCCCcccceeccc
Confidence 888888888 88765421122345764
|
| >1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 | Back alignment and structure |
|---|
Probab=97.63 E-value=0.0018 Score=62.65 Aligned_cols=27 Identities=19% Similarity=0.373 Sum_probs=22.6
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEE
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQE 125 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~ 125 (465)
+|||||+|+|++++++++.+| +++...
T Consensus 4 ~~lGiD~Gst~~k~~l~d~~g---~i~~~~ 30 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKDGK---EIVAKS 30 (270)
T ss_dssp EEEEEEECSSEEEEEEEETTT---EEEEEE
T ss_pred EEEEEEeccceEEEEEEeCCC---CEEEEE
Confidence 689999999999999998876 366543
|
| >4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00017 Score=76.42 Aligned_cols=94 Identities=16% Similarity=0.246 Sum_probs=63.4
Q ss_pred eeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--CC-CcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcce
Q 012386 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (465)
Q Consensus 95 G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~ 171 (465)
.++||||+|+|++|+++++.+|+ ++.+.+..++. |+ .....+++++++.+.++|++.+++.+... .++..
T Consensus 26 ~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~----~~I~~ 98 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDGNQK---IAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGITA----NDIAA 98 (520)
T ss_dssp CEEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCG----GGEEE
T ss_pred CeEEEEEeCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCc----ccEEE
Confidence 47999999999999999999884 66554333321 21 11234688999999999999988754322 45778
Q ss_pred eeeeeec----ccc-cccCCceEEeccCC
Q 012386 172 LGFTFSF----PVR-QTSIASGDLIKWTK 195 (465)
Q Consensus 172 lG~tfSf----Pv~-q~~i~~g~Li~wtK 195 (465)
||++... |++ .++.--.+.+.|..
T Consensus 99 Igis~~g~~~v~~D~~~G~~l~~~i~W~D 127 (520)
T 4e1j_A 99 IGITNQRETVVVWDRETGKPIHNAIVWQD 127 (520)
T ss_dssp EEEEECSSCEEEEETTTCCBSSCEECTTC
T ss_pred EEEeCCcceEEEEECCCCeECcccccccc
Confidence 8888877 777 45421122335753
|
| >2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00031 Score=73.96 Aligned_cols=92 Identities=23% Similarity=0.290 Sum_probs=61.5
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--CCC-cccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCccee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (465)
++||||+|||++|+++++.+|+ ++.+....++. |.. ....+++++++.+.++|++.+++.+... .++..|
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~----~~i~~I 75 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEGR---PVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEA----GEVLAL 75 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCG----GGCCEE
T ss_pred EEEEEeeCCcceEEEEECCCCC---EEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCCc----ccEEEE
Confidence 6899999999999999998774 66554333321 211 1123678999999999999988754321 346778
Q ss_pred eeeee----cccccc-cCCceEEeccC
Q 012386 173 GFTFS----FPVRQT-SIASGDLIKWT 194 (465)
Q Consensus 173 G~tfS----fPv~q~-~i~~g~Li~wt 194 (465)
|++.. .|++.. +.--.+.+.|.
T Consensus 76 gis~~~~~~~~vD~~~G~~l~~~i~w~ 102 (495)
T 2dpn_A 76 GITNQRETTLLWDRKTGKPLHNAIVWQ 102 (495)
T ss_dssp EEEECSSCBEEEETTTCCBSSCEECTT
T ss_pred EEeCCCccEEEEECCCCcCCccceeec
Confidence 88888 478754 42112334685
|
| >3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00035 Score=73.72 Aligned_cols=81 Identities=14% Similarity=0.223 Sum_probs=56.2
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--CC-CcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCccee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (465)
++||||+|+|++|+++++.+|+ ++.+.+..++. |. .....+++++++.+.+++++.+++.+... .++..|
T Consensus 7 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~----~~I~~I 79 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQKGE---IAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDVRA----DQIAGI 79 (501)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCG----GGEEEE
T ss_pred EEEEEEeCccceEEEEEcCCCC---EEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCc----ccEEEE
Confidence 7999999999999999999884 66554333321 11 11234578999999999999988754322 346667
Q ss_pred eeeee----cccccc
Q 012386 173 GFTFS----FPVRQT 183 (465)
Q Consensus 173 G~tfS----fPv~q~ 183 (465)
|++.. .|++..
T Consensus 80 gis~~~~~~v~~D~~ 94 (501)
T 3g25_A 80 GITNQRETTVVWDKH 94 (501)
T ss_dssp EEEECSSCEEEEETT
T ss_pred EEECCcCcEEEEECC
Confidence 77654 467654
|
| >2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00045 Score=72.45 Aligned_cols=90 Identities=16% Similarity=0.295 Sum_probs=60.8
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--CCC-cccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCccee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (465)
+|||||+|||++|+++++.+|+ ++...+..+++ |+. ....+++++++.+.+++++.+++... .++..|
T Consensus 1 ~~lgiDiGtt~~k~~l~d~~g~---~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~------~~i~~I 71 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNEQGE---VVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSL------QDVKAL 71 (484)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHSCC------TTCCEE
T ss_pred CEEEEEecCcccEEEEECCCCC---EEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhCCc------cceEEE
Confidence 4799999999999999998774 66554332221 111 11235789999999999999876421 347788
Q ss_pred eeeeec----ccccccCCceEEeccC
Q 012386 173 GFTFSF----PVRQTSIASGDLIKWT 194 (465)
Q Consensus 173 G~tfSf----Pv~q~~i~~g~Li~wt 194 (465)
|++... +++..+.--.+.+.|.
T Consensus 72 gis~~~~~~v~~D~~G~~l~~~i~w~ 97 (484)
T 2itm_A 72 GIAGQMHGATLLDAQQRVLRPAILWN 97 (484)
T ss_dssp EEEECSSCBEEECTTCCBCSCEECTT
T ss_pred EEcCCcCcEEEECCCcCCCcccceec
Confidence 998888 7776542222344574
|
| >2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00042 Score=73.12 Aligned_cols=90 Identities=9% Similarity=0.020 Sum_probs=60.9
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCc-----ccCCcchHHHHHHHHHHHHHHhh--CCCCCCCCCC
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHL-----MTGSSHELFDYIAAALAKFVATE--GEGFHVSPGR 168 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~-----~~~~~~~lfd~Ia~~I~~fl~~~--~~~~~~~~~~ 168 (465)
++||||+|||++|+++++.+|+ ++.+... +.|... ...+++++++.+.++|++.+++. +... .+
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g~---i~~~~~~--~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~----~~ 75 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEELN---IVHSNNL--NHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYTS----VI 75 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTCC---EEEEEEE--ECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSSS----CE
T ss_pred EEEEEEeCCcceEEEEECCCCC---EEEEEEE--eeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhhcCCCc----cc
Confidence 6899999999999999998874 6655533 333211 12357899999999999998764 3211 34
Q ss_pred cceeeeeee----cccccc-cCCceEEeccC
Q 012386 169 QRELGFTFS----FPVRQT-SIASGDLIKWT 194 (465)
Q Consensus 169 ~~~lG~tfS----fPv~q~-~i~~g~Li~wt 194 (465)
+..||++.. .|++.. +.--.+.+.|.
T Consensus 76 i~~Igis~~~~~~~~~D~~~G~~l~~~i~w~ 106 (503)
T 2w40_A 76 IKCIGITNQRETVIIWDRITGKPLYNAIVWL 106 (503)
T ss_dssp EEEEEEEECSSCEEEEETTTCCBSSCEECTT
T ss_pred eEEEEEcCCcceEEEEECCCCcCCccceeec
Confidence 778888887 478654 42112234575
|
| >3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00047 Score=72.82 Aligned_cols=83 Identities=18% Similarity=0.246 Sum_probs=56.7
Q ss_pred ceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--CC-CcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcc
Q 012386 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170 (465)
Q Consensus 94 ~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~ 170 (465)
..++||||+|+|++|+++++.+|+ ++.+.+..++. |. .....+++++++.+.+++++.+++.+... .++.
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~----~~I~ 76 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRNGK---KIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRP----EAIA 76 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCG----GGEE
T ss_pred CCEEEEEEcCCCceEEEEECCCCC---EEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCCh----hheE
Confidence 347999999999999999999885 66554333321 11 11234688999999999999998765322 3456
Q ss_pred eeeeeee----cccccc
Q 012386 171 ELGFTFS----FPVRQT 183 (465)
Q Consensus 171 ~lG~tfS----fPv~q~ 183 (465)
.||++.. .|++..
T Consensus 77 ~Igis~~~~~~v~~D~~ 93 (506)
T 3h3n_X 77 GIGITNQRETTVVWDKT 93 (506)
T ss_dssp EEEEEECSSCBEEEETT
T ss_pred EEEeeCCcccEEEEeCC
Confidence 6666654 256653
|
| >2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00043 Score=73.06 Aligned_cols=79 Identities=11% Similarity=0.128 Sum_probs=57.5
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCc-----ccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcc
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHL-----MTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~-----~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~ 170 (465)
++||||+|+|++|+++++.+|+ ++.+... +.|... ...+++++++.+.+++++.+++.+... .++.
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G~---i~~~~~~--~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~----~~i~ 73 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGE---IYSTGQL--EHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTH----EDIA 73 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEE--ECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCG----GGEE
T ss_pred EEEEEecCCcceEEEEECCCCC---EEEEEEE--ecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCCc----ccEE
Confidence 6899999999999999998774 6655533 333211 123578999999999999988754321 3467
Q ss_pred eeeeeeec----ccccc
Q 012386 171 ELGFTFSF----PVRQT 183 (465)
Q Consensus 171 ~lG~tfSf----Pv~q~ 183 (465)
.||++... |++..
T Consensus 74 ~Igis~~g~~~v~vD~~ 90 (504)
T 2d4w_A 74 AVGITNQRETAVVWDKT 90 (504)
T ss_dssp EEEEEECSSCBEEEETT
T ss_pred EEEEeCCCCeEEEEECC
Confidence 88888886 77654
|
| >2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00048 Score=72.52 Aligned_cols=92 Identities=15% Similarity=0.149 Sum_probs=61.1
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--CCC-cccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCccee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (465)
++||||+|||++|+++++.+|+ ++.+.+..++. |.. ....+++++++.+.+++++.+++.+... .++..|
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g~---~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~----~~i~~I 76 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRESN---IHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEP----NQIAAI 76 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHTCCG----GGEEEE
T ss_pred EEEEEecCCchhEEEEECCCCC---EEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCc----ccEEEE
Confidence 6899999999999999998774 66555333321 111 1123578999999999999998765322 346777
Q ss_pred eeeeec----ccccccCCceEEeccC
Q 012386 173 GFTFSF----PVRQTSIASGDLIKWT 194 (465)
Q Consensus 173 G~tfSf----Pv~q~~i~~g~Li~wt 194 (465)
|++... +++.++.--.+.+.|.
T Consensus 77 gis~~~~~~v~~D~~G~~l~~~i~w~ 102 (497)
T 2zf5_O 77 GVTNQRETTLVWDKDGKPLYNAIVWQ 102 (497)
T ss_dssp EEEECSSCEEEECTTCCBSSCEECTT
T ss_pred EEecCCCcEEEECCCCCCcccceeec
Confidence 887776 6666542212334574
|
| >3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00072 Score=71.74 Aligned_cols=78 Identities=19% Similarity=0.254 Sum_probs=55.2
Q ss_pred CcceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--CC-CcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCC
Q 012386 92 DEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGR 168 (465)
Q Consensus 92 ~E~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~ 168 (465)
+|+.||||||+|.|+.|+.+++.+|+ ++...+..+++ |. .....+++++++.+.++|++.+++.+... .+
T Consensus 1 tekkYvlgID~GTss~Ka~l~d~~G~---~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~~----~~ 73 (526)
T 3ezw_A 1 TEKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISS----DQ 73 (526)
T ss_dssp --CCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCG----GG
T ss_pred CCceEEEEEEccccceeeeEEcCCCC---EEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCCh----hh
Confidence 47889999999999999999998875 66555443332 21 11223678999999999999998876532 45
Q ss_pred cceeeeee
Q 012386 169 QRELGFTF 176 (465)
Q Consensus 169 ~~~lG~tf 176 (465)
+..|||+-
T Consensus 74 I~aIgis~ 81 (526)
T 3ezw_A 74 IAAIGITN 81 (526)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEeC
Confidence 66777753
|
| >3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.002 Score=68.14 Aligned_cols=92 Identities=11% Similarity=0.148 Sum_probs=59.3
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--C-CCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCccee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--P-PHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (465)
++||||+|+|++|+++++.+|+ ++...+..+++ | +.....+++++++.+.+++++.+ +.+... .++..|
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~~~~~~----~~I~~I 77 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRDGG---LHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDA----RRVSAI 77 (511)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-TTTCCG----GGEEEE
T ss_pred EEEEEEeCCCceEEEEECCCCC---EEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-hcCCCh----hHeEEE
Confidence 7999999999999999998874 66555333321 1 11123468899999999999998 543221 346667
Q ss_pred eeeeec----ccccccCCceEEeccCC
Q 012386 173 GFTFSF----PVRQTSIASGDLIKWTK 195 (465)
Q Consensus 173 G~tfSf----Pv~q~~i~~g~Li~wtK 195 (465)
|++.-. +++..+---.+.+.|..
T Consensus 78 gis~q~~~~v~~D~~G~pl~~~i~W~D 104 (511)
T 3hz6_A 78 VLSGQMQNFLPLDQDHEPLHRAVLYSD 104 (511)
T ss_dssp EEEECCSCBEEECTTSCBSSCEECTTC
T ss_pred EEecccccEEEECCCcCCCcCceecCC
Confidence 766532 55654321223446764
|
| >3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0014 Score=69.95 Aligned_cols=74 Identities=24% Similarity=0.388 Sum_probs=52.0
Q ss_pred eeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--C-CCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcce
Q 012386 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--P-PHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (465)
Q Consensus 95 G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~ 171 (465)
.++||||+|+|++|+++++.+|+ ++...+..+++ | +.....+++++++.+.++|++.+++.+... .++..
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~G~---il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~~----~~I~~ 77 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFDLQGR---MVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINP----IQVKG 77 (554)
T ss_dssp CEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCCG----GGEEE
T ss_pred cEEEEEEECcccEEEEEECCCCC---EEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcCCCH----hHEEE
Confidence 47999999999999999998774 66554333221 1 112234688999999999999998765422 34566
Q ss_pred eeee
Q 012386 172 LGFT 175 (465)
Q Consensus 172 lG~t 175 (465)
||++
T Consensus 78 Igis 81 (554)
T 3l0q_A 78 LGFD 81 (554)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6664
|
| >3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0031 Score=66.44 Aligned_cols=91 Identities=11% Similarity=0.221 Sum_probs=58.3
Q ss_pred eeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--C-CCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcce
Q 012386 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--P-PHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (465)
Q Consensus 95 G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~ 171 (465)
.++||||+|+|++|+++++.+|+ ++...+..++. | +.....+++++++.+.+++++.+++.+ .++..
T Consensus 4 ~~~lgIDiGtts~K~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~-------~~I~~ 73 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLYDINGK---AVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID-------GKIAA 73 (504)
T ss_dssp EEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTCS-------SEEEE
T ss_pred CEEEEEEecCCceEEEEEcCCCC---EEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhCC-------CCeEE
Confidence 37999999999999999998874 66655333321 1 111234688999999999999987643 23566
Q ss_pred eeeeee----cccccccCCceEEeccCC
Q 012386 172 LGFTFS----FPVRQTSIASGDLIKWTK 195 (465)
Q Consensus 172 lG~tfS----fPv~q~~i~~g~Li~wtK 195 (465)
||++.- .+++.++---.+.+.|..
T Consensus 74 Igis~q~~~~v~~D~~G~pl~~~i~W~D 101 (504)
T 3ll3_A 74 ISWSSQMHSLIGLGSDDELLTNSITWAD 101 (504)
T ss_dssp EEEEECSSCBEEECTTSCBSSCEECTTC
T ss_pred EEEECCCCcEEEECCCCCCcccceeCCc
Confidence 666653 245554311123345653
|
| >2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0046 Score=64.74 Aligned_cols=78 Identities=21% Similarity=0.142 Sum_probs=52.2
Q ss_pred eeEEEEEeCCceEEEEEEEecCCcceeEEEEeeee--------ecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCC
Q 012386 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEV--------SIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSP 166 (465)
Q Consensus 95 G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~--------~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~ 166 (465)
.+|||||+|+|++|+++++.+|+ ++......+ +.|... ..+.+++++.+.+++++.....
T Consensus 4 ~~~lgiDiGtts~k~~l~d~~g~---~~~~~~~~~~~~~~~~~~~~g~~-e~d~~~~~~~i~~~~~~~~~~~-------- 71 (489)
T 2uyt_A 4 RNCVAVDLGASSGRVMLARYERE---CRSLTLREIHRFNNGLHSQNGYV-TWDVDSLESAIRLGLNKVCAAG-------- 71 (489)
T ss_dssp EEEEEEEECSSEEEEEEEEEEGG---GTEEEEEEEEEEECCCEEETTEE-ECCHHHHHHHHHHHHHHHHHTT--------
T ss_pred ceEEEEEecCCCceEEEEEecCc---cceEEEEEEeecCCCccccCCeE-EECHHHHHHHHHHHHHHHHhCC--------
Confidence 36899999999999999998775 222111111 111111 2356789999998888876421
Q ss_pred CCcceeeeee----eccccccc
Q 012386 167 GRQRELGFTF----SFPVRQTS 184 (465)
Q Consensus 167 ~~~~~lG~tf----SfPv~q~~ 184 (465)
.++..||++. ..+++..+
T Consensus 72 ~~i~~Igis~q~~~~v~~D~~G 93 (489)
T 2uyt_A 72 IAIDSIGIDTWGVDFVLLDQQG 93 (489)
T ss_dssp CCCCEEEEEECSSCEEEECTTS
T ss_pred CCceEEEEecCcccEEEECCCC
Confidence 2477889988 88887654
|
| >3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.012 Score=62.14 Aligned_cols=86 Identities=13% Similarity=0.117 Sum_probs=57.2
Q ss_pred eeEEEEEeCCceEEEEEEE-ecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceee
Q 012386 95 GLFYALDLGGTNFRVLRVQ-LGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (465)
Q Consensus 95 G~~LaiDlGGTNlRv~~V~-l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG 173 (465)
.++||||+|+|++|+++++ .+|+ ++.+. ..+.|... ..+++++++.+.+++++. +. ..++..||
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~~G~---i~~~~--~~~~~g~~-e~d~~~~~~~i~~~l~~~----~~-----~~~I~~Ig 69 (515)
T 3i8b_A 5 TLVAGVDTSTQSCKVRVTDAETGE---LVRFG--QAKHPNGT-SVDPSYWWSAFQEAAEQA----GG-----LDDVSALA 69 (515)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCC---EEEEE--EEECCSSS-EECTHHHHHHHHHHHHHT----TC-----STTEEEEE
T ss_pred cEEEEEEeccccEEEEEEECCCCe---EEEEE--EEeCCCCc-eECHHHHHHHHHHHHHhc----CC-----ccCceEEE
Confidence 4799999999999999999 6774 66555 34455432 346788888887777643 21 13577788
Q ss_pred eeeec----ccccccCCceEEeccCC
Q 012386 174 FTFSF----PVRQTSIASGDLIKWTK 195 (465)
Q Consensus 174 ~tfSf----Pv~q~~i~~g~Li~wtK 195 (465)
++.-. +++.++---.+.+.|..
T Consensus 70 is~q~~~~v~~D~~G~pl~~~i~W~D 95 (515)
T 3i8b_A 70 VGGQQHGMVILDNQGNVIRDAMLWND 95 (515)
T ss_dssp EEECSSCBEEECTTSCBCSCEECTTC
T ss_pred EeCCcceEEEECCCCCCcCCcceecC
Confidence 87765 66665422233457863
|
| >3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0049 Score=64.67 Aligned_cols=70 Identities=13% Similarity=0.082 Sum_probs=47.2
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec-C-CCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI-P-PHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i-p-~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG 173 (465)
+||+||+|+|++|+++++.+|+ ++...+..+++ | +.....+++++++.+.+++++.+ + .++..||
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~G~---i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~-~---------~~I~aIg 73 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLDGR---MLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA-D---------HPVTTIV 73 (482)
T ss_dssp -CEEEEECSSEEEEEEECTTSC---EEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT-T---------SCCCEEE
T ss_pred eEEEEEcCCCCeEEEEEECCCc---EEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH-h---------cCCCEEE
Confidence 7899999999999999997764 66554333321 1 11123468899999999998876 2 1356677
Q ss_pred eeeec
Q 012386 174 FTFSF 178 (465)
Q Consensus 174 ~tfSf 178 (465)
|+...
T Consensus 74 is~~~ 78 (482)
T 3h6e_A 74 PVGHG 78 (482)
T ss_dssp EEECS
T ss_pred EecCc
Confidence 66543
|
| >3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A | Back alignment and structure |
|---|
Probab=95.91 E-value=0.017 Score=55.13 Aligned_cols=123 Identities=15% Similarity=0.173 Sum_probs=67.2
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
.+|+||+|+||+++++++ ++ ++.. .+.+++.. ..+.+++..++.+.+.. .. .+...++++
T Consensus 4 M~L~IDIGNT~ik~gl~~-~~---~l~~----~~r~~T~~-~~t~de~~~~l~~l~~~----~~-------~~i~~i~Is 63 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE-DG---KTFR----RWRLSTGV-FQTEDELFSHLHPLLGD----AM-------REIKGIGVA 63 (249)
T ss_dssp EEEEEEECSSEEEEEEES-SS---SSCE----EEEEECCT-TCCHHHHHHHHHHHHGG----GG-------GGEEEEEEE
T ss_pred eEEEEEECCCeEEEEEEE-CC---EEEE----EEEecCCC-CCCHHHHHHHHHHHHhh----cc-------ccCCEEEEE
Confidence 479999999999999996 23 2443 23444432 24567777666544332 10 123334444
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeE---------EEEEe------chHHHhhcccc
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRV---------AALVN------DTIGTLAGGRY 240 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v---------~alvN------Dtvatlla~~y 240 (465)
..-|-... .+.+.+++.+ +++..+ +...| |-.+.+++.+.
T Consensus 64 SVvp~~~~----------------------~~~~~~~~~~---~~~p~~v~~~~~gl~~~y~~P~~lG~DR~~~~~aa~~ 118 (249)
T 3bex_A 64 SVVPTQNT----------------------VIERFSQKYF---HISPIWVKAKNGCVKWNVKNPSEVGADRVANVVAFVK 118 (249)
T ss_dssp ESCHHHHH----------------------HHHHHHHHHH---SCCCEECCCCSSSSEECSSCGGGSCHHHHHHHHHHHH
T ss_pred cCcHHHHH----------------------HHHHHHHHhc---CCCeEEEEccCCCceeccCChhhcCHHHHHHHHHHHH
Confidence 44442110 0112222222 221100 13344 66677777654
Q ss_pred cCCceEEEEEEccccceeEEccC
Q 012386 241 HNKDAIAAVILGTGTNAAYVERA 263 (465)
Q Consensus 241 ~~~~~~iglIlGTG~Na~yie~~ 263 (465)
......+-+-+||.+...++.++
T Consensus 119 ~~~~~~iVvD~GTA~T~d~v~~g 141 (249)
T 3bex_A 119 EYGKNGIIIDMGTATTVDLVVNG 141 (249)
T ss_dssp HTCSCEEEEEESSEEEEEEEETT
T ss_pred HcCCCEEEEEcCCceEEEEEeCC
Confidence 44567889999999999999443
|
| >3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=93.91 E-value=0.1 Score=50.24 Aligned_cols=66 Identities=14% Similarity=0.152 Sum_probs=40.0
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
.+|+||+|+||+++++++- + +++. ++.+|+. ..+.+++ +..+.++++..+... .+...++++
T Consensus 3 MlL~IDIGNT~iK~gl~d~-~---~l~~----~~r~~T~--~~t~de~----~~~l~~ll~~~~~~~----~~I~~iiIS 64 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDG-D---EIKL----RFRHTSK--VSTSDEL----GIFLKSVLRENNCSP----ETIRKIAIC 64 (266)
T ss_dssp CEEEEEECSSEEEEEEEET-T---EEEE----EEEEECS--CCCHHHH----HHHHHHHHHTTTCCG----GGCCEEEEE
T ss_pred eEEEEEECCCeEEEEEEEC-C---EEEE----EEEecCC--CCCHHHH----HHHHHHHHHHcCCCh----hhceEEEEe
Confidence 4799999999999999963 2 3553 4556655 2456554 444566666554321 234455555
Q ss_pred eecc
Q 012386 176 FSFP 179 (465)
Q Consensus 176 fSfP 179 (465)
...|
T Consensus 65 SVvp 68 (266)
T 3djc_A 65 SVVP 68 (266)
T ss_dssp ESCH
T ss_pred cchH
Confidence 5544
|
| >2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=93.11 E-value=2.1 Score=42.37 Aligned_cols=55 Identities=13% Similarity=0.117 Sum_probs=37.4
Q ss_pred cHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccc--c--CCceEEEEEEcccc-ceeEEcc
Q 012386 206 DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY--H--NKDAIAAVILGTGT-NAAYVER 262 (465)
Q Consensus 206 dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y--~--~~~~~iglIlGTG~-Na~yie~ 262 (465)
+.++.+.+++++.|+++ ..++|...|++.+..+ . .....+-+=+|-|+ ..+++..
T Consensus 151 ~~v~~~~~~~~~aGl~~--~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~ 210 (377)
T 2ych_A 151 EAVAGVLEALRGAGLVP--VVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRG 210 (377)
T ss_dssp HHHHHHHHHHHHTTCEE--EEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEET
T ss_pred HHHHHHHHHHHHCCCce--EEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEEC
Confidence 34577888888778875 7899999998876432 1 13445566688888 5555544
|
| >2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* | Back alignment and structure |
|---|
Probab=92.75 E-value=7.9 Score=37.88 Aligned_cols=136 Identities=11% Similarity=0.118 Sum_probs=68.2
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCC-ccc-CCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPH-LMT-GSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~-~~~-~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG 173 (465)
.+||||.+.+...+++++- | +++......+.-+.. ... .....-.+.+...|++.+++.+... ++...+.
T Consensus 2 ~iLgIdts~~~~~val~~~-g---~i~~~~~~~~~~~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~----~did~Ia 73 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSE-D---KVLANVFDTLTTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSL----DDIDVIA 73 (330)
T ss_dssp CEEEEECSSSEEEEEEECS-S---CEEEEEEEECCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCT----TTCCEEE
T ss_pred EEEEEEccCCCeEEEEEEC-C---EEEEEEEEEeecccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCH----HHCcEEE
Confidence 4799999999999999963 3 355433222221111 000 0011223445556677777666533 3455666
Q ss_pred eeeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCC-ceEEEEEEc
Q 012386 174 FTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK-DAIAAVILG 252 (465)
Q Consensus 174 ~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~-~~~iglIlG 252 (465)
+| .+|=..+++ . .|....+.|..++ ++|+ .-+|--.+-+++..| .+ +..+.+++.
T Consensus 74 ~~-~GPG~~~~l------------r----vg~~~ak~la~~~---~~pl---~~v~h~~aHa~~a~~-~~~~~~~~l~v~ 129 (330)
T 2ivn_A 74 FS-QGPGLGPAL------------R----VVATAARALAVKY---RKPI---VGVNHCIAHVEITKM-FGVKDPVGLYVS 129 (330)
T ss_dssp EE-EESSCHHHH------------H----HHHHHHHHHHHHT---TCCE---EEEEHHHHHHHGGGG-GTCCSCEEEEEC
T ss_pred EE-CCCCchHHH------------H----HHHHHHHHHHHHc---CCCE---EeeCcHHHHHHHHhh-cCCCCCeEEEEc
Confidence 55 234211111 0 1223444444444 6775 455665666666555 22 222566666
Q ss_pred cccceeEEccC
Q 012386 253 TGTNAAYVERA 263 (465)
Q Consensus 253 TG~Na~yie~~ 263 (465)
-|....|..+.
T Consensus 130 GG~t~~i~~~~ 140 (330)
T 2ivn_A 130 GGNTQVLALEG 140 (330)
T ss_dssp SSCEEEEEEET
T ss_pred CCCceEEEEcC
Confidence 68555444333
|
| >2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=92.63 E-value=0.55 Score=45.13 Aligned_cols=50 Identities=18% Similarity=0.284 Sum_probs=31.4
Q ss_pred EEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhC
Q 012386 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEG 159 (465)
Q Consensus 97 ~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~ 159 (465)
+|+||+|+||+++++++ ++ ++.. .+.+++.. ..+.+++..++ .++++.++
T Consensus 2 lL~IDIGNT~ik~gl~~-~~---~l~~----~~r~~T~~-~~t~de~~~~l----~~ll~~~~ 51 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE-EG---ELRQ----HWRMETDR-HKTEDEYGMLV----KQLLEHEG 51 (268)
T ss_dssp EEEEEECSSEEEEEEEE-TT---EEEE----EEEEECCT-TCCHHHHHHHH----HHHHHHTT
T ss_pred EEEEEECcCcEEEEEEE-CC---EEEE----EEEecCCC-cCCHHHHHHHH----HHHHHHcC
Confidence 68999999999999997 22 3543 34455432 23566665555 44555444
|
| >4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* | Back alignment and structure |
|---|
Probab=92.54 E-value=0.26 Score=52.04 Aligned_cols=33 Identities=15% Similarity=0.121 Sum_probs=26.6
Q ss_pred eeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeee
Q 012386 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVS 130 (465)
Q Consensus 95 G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ 130 (465)
.+|||||+|.|++|+.+++.+|+ ++...+..++
T Consensus 10 ~~~lgID~GTts~Ka~l~d~~G~---vv~~~~~~~~ 42 (538)
T 4bc3_A 10 RCCLGWDFSTQQVKVVAVDAELN---VFYEESVHFD 42 (538)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEEEEEHH
T ss_pred CEEEEEEEcCcCEEEEEECCCCC---EEEEEEEecC
Confidence 38999999999999999998774 7766655543
|
| >3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} | Back alignment and structure |
|---|
Probab=91.32 E-value=2.6 Score=39.61 Aligned_cols=43 Identities=19% Similarity=0.283 Sum_probs=27.1
Q ss_pred HHHHHHHHHcCCCeeEEEEEechHHHhhcccccCCceEEEEEEccccc
Q 012386 209 GELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTN 256 (465)
Q Consensus 209 ~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~N 256 (465)
+.+++++++.|+++ ..++++..|++.+.... ..+-+=+|-|+.
T Consensus 109 ~~~~~~~~~~g~~~--~~i~~e~~A~a~~~~~~---~~~viDiGggst 151 (272)
T 3h1q_A 109 EACGHVVAGAGLEL--VTLVDEPVAAARALGIN---DGIVVDIGGGTT 151 (272)
T ss_dssp THHHHHHHHTTCEE--EEEECHHHHHHHHHTCS---SEEEEEECSSCE
T ss_pred HHHHHHHHHcCCee--eecccHHHHHHHHHcCC---CEEEEEECCCcE
Confidence 34566666668875 68999999988764332 223344566653
|
| >4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} | Back alignment and structure |
|---|
Probab=87.58 E-value=2.3 Score=42.72 Aligned_cols=49 Identities=14% Similarity=0.165 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccC-----CceEEEEEEccccce
Q 012386 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN-----KDAIAAVILGTGTNA 257 (465)
Q Consensus 207 v~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~-----~~~~iglIlGTG~Na 257 (465)
-.+.++++.++-|+++ +.++|+..|++++..... ....+-+=+|-||--
T Consensus 165 ~r~~~~~a~~~AGl~~--~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~d 218 (409)
T 4gni_A 165 QKAALIAAAAAADLEV--LQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSD 218 (409)
T ss_dssp HHHHHHHHHHHTTCEE--EEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEE
T ss_pred HHHHHHHHHHHcCCCe--EEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceE
Confidence 4577888888778864 799999999998865532 334444457888743
|
| >4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=87.45 E-value=0.35 Score=49.02 Aligned_cols=57 Identities=16% Similarity=0.061 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHH
Q 012386 360 KLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVK 425 (465)
Q Consensus 360 ~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~ 425 (465)
+.+++-|+.+++-.++-++-.|.++...++.. + .|++.||+-++.+.+++.+.+.+.
T Consensus 293 ~~Gd~~A~la~d~f~yriak~Iga~aa~LG~v-------D--aIVfTGGIgEns~~vr~~I~~~l~ 349 (398)
T 4ijn_A 293 ESGDEHAKLAYDVYIHRLRKYIGAYMAVLGRT-------D--VISFTAGVGENVPPVRRDALAGLG 349 (398)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHHHHSSC-------C--EEEEEHHHHHHCHHHHHHHHTTCG
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCC-------c--EEEECCccccccHHHHHHHHHHHh
Confidence 34556677777777777777777777777432 3 789999999999999999988774
|
| >3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... | Back alignment and structure |
|---|
Probab=85.63 E-value=3 Score=41.69 Aligned_cols=52 Identities=15% Similarity=0.176 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc------CCceEEEEEEccccc-eeEE
Q 012386 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH------NKDAIAAVILGTGTN-AAYV 260 (465)
Q Consensus 207 v~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~------~~~~~iglIlGTG~N-a~yi 260 (465)
-.+.+.++.++.|+++ +.++|+..|++++.... .....+-+=+|-||- .+.+
T Consensus 173 ~r~~~~~a~~~AGl~~--~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~ 231 (404)
T 3i33_A 173 QRQATKDAGTITGLNV--LRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSIL 231 (404)
T ss_dssp HHHHHHHHHHHHTCEE--EEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEE
T ss_pred HHHHHHHHHHHcCCCe--EEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEE
Confidence 4567778877778864 79999999999875543 233445455788884 4433
|
| >3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* | Back alignment and structure |
|---|
Probab=83.09 E-value=5.6 Score=41.60 Aligned_cols=77 Identities=16% Similarity=0.144 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCCh
Q 012386 365 LCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDG 444 (465)
Q Consensus 365 ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dg 444 (465)
+++++++=-|.-+...+-++-...+.. .+ .|.++||.. +.+.+.+.+.+.+ + ..|.+-...++
T Consensus 376 i~RAvlEgia~~~r~~le~l~~~~g~~------~~--~i~v~GGga-ks~~~~Qi~ADvl----g----~pV~~~~~~E~ 438 (526)
T 3ezw_A 376 IIRATLESIAYQTRDVLEAMQADSGIR------LH--ALRVDGGAV-ANNFLMQFQSDIL----G----TRVERPEVREV 438 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCC------CS--EEEEESGGG-GCHHHHHHHHHHH----T----SEEEEESCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC------CC--EEEEECchh-hCHHHHHHHHHHH----C----CEEEeCCCCch
Confidence 445555544444444444443334431 13 466677765 6787877766654 2 35655556889
Q ss_pred hHHHHHHHHHHhcc
Q 012386 445 SGIGAALLAASHSQ 458 (465)
Q Consensus 445 s~iGAAl~Aa~~~~ 458 (465)
+.+|||++|+++.-
T Consensus 439 ~alGAA~lA~~a~G 452 (526)
T 3ezw_A 439 TALGAAYLAGLAVG 452 (526)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998874
|
| >4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* | Back alignment and structure |
|---|
Probab=82.10 E-value=26 Score=35.38 Aligned_cols=55 Identities=13% Similarity=0.037 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccC--CceEEEEEEcccc-ceeEEccC
Q 012386 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN--KDAIAAVILGTGT-NAAYVERA 263 (465)
Q Consensus 207 v~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~--~~~~iglIlGTG~-Na~yie~~ 263 (465)
.++-+.+++++-|+++ ..++|...|+.++....+ +...+-+=+|-|| +.+++.++
T Consensus 169 ~v~n~~~~~~~AGL~v--~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g 226 (419)
T 4a2a_A 169 VYEMFYNFLQDTVKSP--FQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNG 226 (419)
T ss_dssp HHHHHHHHHHTTSCSC--EEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETT
T ss_pred HHHHHHHHHHHcCCcE--EEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECC
Confidence 6778888888888886 689999988876532211 1234445589888 56666544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 465 | ||||
| d1bdga1 | 208 | c.55.1.3 (A:13-222) Hexokinase {Blood fluke (Schis | 3e-79 | |
| d1v4sa1 | 205 | c.55.1.3 (A:14-218) Glucokinase {Human (Homo sapie | 2e-78 | |
| d1czan3 | 205 | c.55.1.3 (N:466-670) Mammalian type I hexokinase { | 1e-77 | |
| d1czan1 | 207 | c.55.1.3 (N:16-222) Mammalian type I hexokinase {H | 2e-77 | |
| d1ig8a1 | 207 | c.55.1.3 (A:18-224) Hexokinase {Baker's yeast (Sac | 7e-75 | |
| d1bdga2 | 237 | c.55.1.3 (A:223-460) Hexokinase {Blood fluke (Schi | 2e-72 | |
| d1czan4 | 243 | c.55.1.3 (N:671-913) Mammalian type I hexokinase { | 6e-69 | |
| d1ig8a2 | 262 | c.55.1.3 (A:225-486) Hexokinase {Baker's yeast (Sa | 4e-67 | |
| d1v4sa2 | 243 | c.55.1.3 (A:219-461) Glucokinase {Human (Homo sapi | 9e-66 | |
| d1czan2 | 243 | c.55.1.3 (N:223-465) Mammalian type I hexokinase { | 4e-64 | |
| d2ch5a1 | 227 | c.55.1.5 (A:118-344) N-acetylglucosamine kinase, N | 5e-07 |
| >d1bdga1 c.55.1.3 (A:13-222) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Blood fluke (Schistosoma mansoni) [TaxId: 6183]
Score = 243 bits (621), Expect = 3e-79
Identities = 76/204 (37%), Positives = 107/204 (52%), Gaps = 8/204 (3%)
Query: 41 LKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFY 98
+ E+ + + ++ D M M GL S +KM SYV P G E G F
Sbjct: 10 VVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFL 69
Query: 99 ALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATE 158
ALDLGGTN+RVL V L G +G+ + + IP M+GS ELF YIA LA F+
Sbjct: 70 ALDLGGTNYRVLSVTLEG-KGKSPRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENN 128
Query: 159 GEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI 218
G ++ +LGFTFSFP Q + L++WTKGFS + G +V L +++
Sbjct: 129 GM-----KDKKFDLGFTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTELDKR 183
Query: 219 GLDMRVAALVNDTIGTLAGGRYHN 242
L+++ A+VNDT+GTLA +
Sbjct: 184 ELNVKCVAVVNDTVGTLASCALED 207
|
| >d1v4sa1 c.55.1.3 (A:14-218) Glucokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Glucokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 240 bits (615), Expect = 2e-78
Identities = 80/208 (38%), Positives = 115/208 (55%), Gaps = 10/208 (4%)
Query: 40 ILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGG--SKLKMLISYVDNLPTGDEKGLF 97
+++++ + L++V M EM GL E + +KML +YV + P G E G F
Sbjct: 2 LVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDF 61
Query: 98 YALDLGGTNFRVLRVQLGGREG--RVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFV 155
+LDLGGTNFRV+ V++G E VK + + SIP MTG++ LFDYI+ ++ F+
Sbjct: 62 LSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFL 121
Query: 156 ATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAM 215
++ LGFTFSFPVR I G L+ WTKGF G +VVG L A+
Sbjct: 122 DKHQM-----KHKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAI 176
Query: 216 ERIG-LDMRVAALVNDTIGTLAGGRYHN 242
+R G +M V A+VNDT+ T+ Y +
Sbjct: 177 KRRGDFEMDVVAMVNDTVATMISCYYED 204
|
| >d1czan3 c.55.1.3 (N:466-670) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 239 bits (610), Expect = 1e-77
Identities = 83/205 (40%), Positives = 113/205 (55%), Gaps = 8/205 (3%)
Query: 41 LKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFY 98
++E L +V M EM GL + + +KML S+V P G E G F
Sbjct: 5 IEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFL 64
Query: 99 ALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATE 158
ALDLGGTNFRVL V++ + R V+ + +IP +M G+ ELFD+I + ++ F+
Sbjct: 65 ALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYM 124
Query: 159 GEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAME-R 217
G G + LGFTFSFP +QTS+ +G LI WTKGF D VG DVV L A++ R
Sbjct: 125 G-----IKGPRMPLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRR 179
Query: 218 IGLDMRVAALVNDTIGTLAGGRYHN 242
D+ V A+VNDT+GT+ Y
Sbjct: 180 EEFDLDVVAVVNDTVGTMMTCAYEE 204
|
| >d1czan1 c.55.1.3 (N:16-222) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 238 bits (608), Expect = 2e-77
Identities = 71/206 (34%), Positives = 108/206 (52%), Gaps = 8/206 (3%)
Query: 41 LKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFY 98
+ + L + EM GL+ + + +KML ++V ++P G EKG F
Sbjct: 7 IDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFI 66
Query: 99 ALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATE 158
ALDLGG++FR+LRVQ+ + + V E E P +++ GS +LFD++A L F+
Sbjct: 67 ALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKR 126
Query: 159 GEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI 218
+ +GFTFSFP +Q+ I LI WTK F G DVV L KA+++
Sbjct: 127 KIKDK-----KLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKR 181
Query: 219 G-LDMRVAALVNDTIGTLAGGRYHNK 243
G D + A+VNDT+GT+ Y ++
Sbjct: 182 GDYDANIVAVVNDTVGTMMTCGYDDQ 207
|
| >d1ig8a1 c.55.1.3 (A:18-224) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]
Score = 231 bits (591), Expect = 7e-75
Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 7/203 (3%)
Query: 41 LKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYAL 100
++ E+ P L+ V E+ GL+ +GG+ M+ +V + PTG E G F A+
Sbjct: 10 IENFEKIFTVPTETLQAVTKHFISELEKGLSKKGGNI-PMIPGWVMDFPTGKESGDFLAI 68
Query: 101 DLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLM-TGSSHELFDYIAAALAKFVATEG 159
DLGGTN RV+ V+LGG R + +P + T + EL+++IA +L F+ +
Sbjct: 69 DLGGTNLRVVLVKLGG--DRTFDTTQSKYRLPDAMRTTQNPDELWEFIADSLKAFIDEQF 126
Query: 160 EGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIG 219
LGFTFSFP Q I G L +WTKGF I + DVV L K + +
Sbjct: 127 PQ---GISEPIPLGFTFSFPASQNKINEGILQRWTKGFDIPNIENHDVVPMLQKQITKRN 183
Query: 220 LDMRVAALVNDTIGTLAGGRYHN 242
+ + V AL+NDT GTL Y +
Sbjct: 184 IPIEVVALINDTTGTLVASYYTD 206
|
| >d1bdga2 c.55.1.3 (A:223-460) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Blood fluke (Schistosoma mansoni) [TaxId: 6183]
Score = 226 bits (578), Expect = 2e-72
Identities = 67/243 (27%), Positives = 108/243 (44%), Gaps = 48/243 (19%)
Query: 249 VILGTGTNAAYVERAHAIPKWHGLLPKSGEMI---------------------------- 280
+I+GTGTN AY+E + + G K E++
Sbjct: 6 LIVGTGTNVAYIEDSSKVELMDG--VKEPEVVINTEWGAFGEKGELDCWRTQFDKSMDID 63
Query: 281 --------FEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHH 332
+EK++SGMYLGE+VR ++ + E+ F +P +LK+ L T +++ +
Sbjct: 64 SLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPERLKVRNSLLTRYLTDVER 123
Query: 333 DTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDT 392
D + L L D L + ++V C++V R A L+ AGI IL+++ R
Sbjct: 124 DPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACEMVVKRAAYLAGAGIACILRRINRSE 183
Query: 393 VRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALL 452
V + +DG L++ + KF M V +L + + S DGSG GAA +
Sbjct: 184 V--------TVGVDGSLYKFHPKFCERMTDMVDKLKPKNTR--FCLRLSEDGSGKGAAAI 233
Query: 453 AAS 455
AAS
Sbjct: 234 AAS 236
|
| >d1czan4 c.55.1.3 (N:671-913) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 217 bits (555), Expect = 6e-69
Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 41/243 (16%)
Query: 249 VILGTGTNAAYVERAHAIPKWHG---------------------------------LLPK 275
+I+GTG+NA Y+E + G
Sbjct: 6 LIVGTGSNACYMEEMKNVEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLN 65
Query: 276 SGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTS 335
+G+ +EK+ISGMYLGEIVR +L ++ F + LK I T +S + D
Sbjct: 66 AGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRL 125
Query: 336 PDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRD 395
L+V + + L + N++ LV +C +V+ R A+L AG+ ++ K+ + R
Sbjct: 126 ALLQV--RAILQQLGL-NSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIREN--RG 180
Query: 396 GEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAAS 455
++ + +DG L++ + FS M TVKEL + V S DGSG GAAL+ A
Sbjct: 181 LDRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPK---CNVSFLLSEDGSGKGAALITAV 237
Query: 456 HSQ 458
+
Sbjct: 238 GVR 240
|
| >d1ig8a2 c.55.1.3 (A:225-486) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]
Score = 213 bits (544), Expect = 4e-67
Identities = 70/254 (27%), Positives = 105/254 (41%), Gaps = 52/254 (20%)
Query: 244 DAIAAVILGTGTNAAYVERAHAIPKWHGL----LPKSGEMI------------------- 280
+ VI GTG N AY + I K G +P S M
Sbjct: 1 ETKMGVIFGTGVNGAYYDVCSDIEKLQGKLSDDIPPSAPMAINCEYGSFDNEHVVLPRTK 60
Query: 281 ----------------FEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRT 324
FEK+ SG YLGEI+R L M ++ F + K PF++ T
Sbjct: 61 YDITIDEESPRPGQQTFEKMSSGYYLGEILRLALMDMYKQGFIFKNQDLSKFDKPFVMDT 120
Query: 325 PHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGI 384
+ + + D +L ++ I NT+++ RKL+ L +++ R ARLS GI I
Sbjct: 121 SYPARIEEDPFENLEDTDDLFQNEFGI-NTTVQERKLIRRLSELIGARAARLSVCGIAAI 179
Query: 385 LKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSE----TVVIEH 440
+K G T IA DG ++ Y F + +K++ G + + I
Sbjct: 180 CQKRGYKTG--------HIAADGSVYNRYPGFKEKAANALKDIYGWTQTSLDDYPIKIVP 231
Query: 441 SNDGSGIGAALLAA 454
+ DGSG GAA++AA
Sbjct: 232 AEDGSGAGAAVIAA 245
|
| >d1v4sa2 c.55.1.3 (A:219-461) Glucokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Glucokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 209 bits (534), Expect = 9e-66
Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 41/244 (16%)
Query: 249 VILGTGTNAAYVERAHAIPKWHG--------------------LLPKS------------ 276
+I+GTG NA Y+E + G
Sbjct: 6 MIVGTGCNACYMEEMQNVELVEGDEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSAN 65
Query: 277 -GEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTS 335
G+ ++EK+I G Y+GE+VR VL R+ +E F +L+ T +S + DT
Sbjct: 66 PGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTG 125
Query: 336 PDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRD 395
++ + L + S +V C+ V+TR A + +AG+ G++ ++ R
Sbjct: 126 DRKQI--YNILSTLGL-RPSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRES--RS 180
Query: 396 GEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAAS 455
+ + + +DG +++ + F ++V+ L + S +GSG GAAL++A
Sbjct: 181 EDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPS---CEITFIESEEGSGRGAALVSAV 237
Query: 456 HSQY 459
+
Sbjct: 238 ACKK 241
|
| >d1czan2 c.55.1.3 (N:223-465) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 205 bits (523), Expect = 4e-64
Identities = 67/247 (27%), Positives = 108/247 (43%), Gaps = 41/247 (16%)
Query: 248 AVILGTGTNAAYVERAHAIPKWHG-------------------LL--------------P 274
+I+GTGTNA Y+E I G L
Sbjct: 5 GLIIGTGTNACYMEELRHIDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSL 64
Query: 275 KSGEMIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDT 334
G+ +FEK++SGMYLGE+VR +L +MA+E F + P+L T +SA+ +
Sbjct: 65 NPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKN- 123
Query: 335 SPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVR 394
L + L L + S V +C IV+ R A L AA + IL +L + +
Sbjct: 124 KEGLHNAKEILTR-LGVE-PSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDN--K 179
Query: 395 DGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAA 454
+ ++ + +DG L++ + ++S T++ L+ + V S GSG GAA++ A
Sbjct: 180 GTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPD---SDVRFLLSESGSGKGAAMVTA 236
Query: 455 SHSQYLE 461
+ E
Sbjct: 237 VAYRLAE 243
|
| >d2ch5a1 c.55.1.5 (A:118-344) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: N-acetylglucosamine kinase, NAGK species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.3 bits (114), Expect = 5e-07
Identities = 23/222 (10%), Positives = 58/222 (26%), Gaps = 26/222 (11%)
Query: 244 DAIAAVILGTGTNAAYV---ERAHAIPKWHGLLPKSGEMIFEKIISGMYLGEIVRRVLCR 300
D +I GTG+N + W ++ G S ++ +++
Sbjct: 1 DGGVVLISGTGSNCRLINPDGSESGCGGWGHMMGDEG--------SAYWIAHQAVKIVFD 52
Query: 301 MAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRK 360
D + ++ + + D + K+ +
Sbjct: 53 SI-------DNLEAAPHDIGYVKQAMFHYFQVPDRLGILTHLYRDFDKCRFAGFCRKIAE 105
Query: 361 LV---VELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFS 417
L + + + IV +L ++ + + G +++ +
Sbjct: 106 GAQQGDPLSRYIFRKAGEMLGRHIVAVLPEIDPVLFQGKIGLPILCV--GSVWKSWELLK 163
Query: 418 ACMQSTVKELLGEEVSET---VVIEHSNDGSGIGAALLAASH 456
+ + + + S +G A L A H
Sbjct: 164 EGFLLALTQGREIQAQNFFSSFTLMKLRHSSALGGASLGARH 205
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 465 | |||
| d1bdga1 | 208 | Hexokinase {Blood fluke (Schistosoma mansoni) [Tax | 100.0 | |
| d1czan3 | 205 | Mammalian type I hexokinase {Human (Homo sapiens) | 100.0 | |
| d1ig8a1 | 207 | Hexokinase {Baker's yeast (Saccharomyces cerevisia | 100.0 | |
| d1v4sa1 | 205 | Glucokinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1czan1 | 207 | Mammalian type I hexokinase {Human (Homo sapiens) | 100.0 | |
| d1bdga2 | 237 | Hexokinase {Blood fluke (Schistosoma mansoni) [Tax | 100.0 | |
| d1ig8a2 | 262 | Hexokinase {Baker's yeast (Saccharomyces cerevisia | 100.0 | |
| d1czan4 | 243 | Mammalian type I hexokinase {Human (Homo sapiens) | 100.0 | |
| d1v4sa2 | 243 | Glucokinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1czan2 | 243 | Mammalian type I hexokinase {Human (Homo sapiens) | 100.0 | |
| d1sz2a1 | 319 | Glucokinase Glk {Escherichia coli [TaxId: 562]} | 99.7 | |
| d2ap1a2 | 117 | Putative regulator protein YcfX {Salmonella typhim | 99.65 | |
| d2hoea3 | 128 | N-acetylglucosamine kinase {Thermotoga maritima [T | 99.57 | |
| d1z05a2 | 197 | Transcriptional regulator VC2007 {Vibrio cholerae | 99.56 | |
| d1woqa1 | 129 | Inorganic polyphosphate/ATP-glucomannokinase PPGMK | 99.53 | |
| d1z6ra2 | 129 | Mlc protein {Escherichia coli [TaxId: 562]} | 99.53 | |
| d2aa4a1 | 119 | N-acetylmannosamine kinase NanK {Escherichia coli | 99.52 | |
| d1z05a3 | 128 | Transcriptional regulator VC2007 {Vibrio cholerae | 99.5 | |
| d2gupa1 | 114 | Hypothetical protein SP2142 {Streptococcus pneumon | 99.5 | |
| d1xc3a1 | 118 | Putative fructokinase YhdR {Bacillus subtilis [Tax | 99.42 | |
| d2ap1a1 | 186 | Putative regulator protein YcfX {Salmonella typhim | 99.41 | |
| d1z6ra3 | 196 | Mlc protein {Escherichia coli [TaxId: 562]} | 99.39 | |
| d2gupa2 | 175 | Hypothetical protein SP2142 {Streptococcus pneumon | 99.38 | |
| d2hoea2 | 169 | N-acetylglucosamine kinase {Thermotoga maritima [T | 99.29 | |
| d2aa4a2 | 170 | N-acetylmannosamine kinase NanK {Escherichia coli | 99.22 | |
| d2ewsa1 | 267 | Type II pantothenate kinase, CoaW {Staphylococcus | 99.16 | |
| d1q18a1 | 110 | Glucokinase Glk {Escherichia coli [TaxId: 562]} | 99.07 | |
| d1huxa_ | 259 | Hydroxyglutaryl-CoA dehydratase component A {Acida | 99.02 | |
| d1woqa2 | 124 | Inorganic polyphosphate/ATP-glucomannokinase PPGMK | 98.89 | |
| d1xc3a2 | 176 | Putative fructokinase YhdR {Bacillus subtilis [Tax | 98.89 | |
| d2ch5a1 | 227 | N-acetylglucosamine kinase, NAGK {Human (Homo sapi | 98.88 | |
| d1zc6a1 | 114 | Probable N-acetylglucosamine kinase CV2896 {Chromo | 98.78 | |
| d2ch5a2 | 117 | N-acetylglucosamine kinase, NAGK {Human (Homo sapi | 98.29 | |
| d2p3ra1 | 252 | Glycerol kinase {Escherichia coli [TaxId: 562]} | 97.38 | |
| d1zc6a2 | 171 | Probable N-acetylglucosamine kinase CV2896 {Chromo | 97.38 | |
| d1r59o1 | 252 | Glycerol kinase {Enterococcus casseliflavus [TaxId | 95.97 | |
| d1zxoa2 | 174 | Hypothetical protein BT3618 {Bacteroides thetaiota | 95.82 | |
| d1zbsa1 | 176 | Hypothetical protein PG1100 {Porphyromonas gingiva | 95.72 | |
| d1zbsa2 | 107 | Hypothetical protein PG1100 {Porphyromonas gingiva | 94.24 | |
| d1bupa1 | 185 | Heat shock protein 70kDa, ATPase fragment {Cow (Bo | 92.26 | |
| d2p3ra2 | 247 | Glycerol kinase {Escherichia coli [TaxId: 562]} | 89.75 | |
| d1r59o2 | 235 | Glycerol kinase {Enterococcus casseliflavus [TaxId | 88.56 | |
| d1u6za2 | 124 | Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5 | 84.86 | |
| d1e4ft1 | 193 | Cell division protein FtsA {Thermotoga maritima [T | 81.65 |
| >d1bdga1 c.55.1.3 (A:13-222) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Blood fluke (Schistosoma mansoni) [TaxId: 6183]
Probab=100.00 E-value=1.2e-59 Score=438.48 Aligned_cols=201 Identities=37% Similarity=0.629 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcC--CCCCCcceeccccccCCCCCcceeEEEEEeCCceEEEEEEEe
Q 012386 37 AVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLAS--EGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQL 114 (465)
Q Consensus 37 ~~~~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~--~~~s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V~l 114 (465)
+.+-+.++.++|.++.++|++|+++|.+||++||++ +..|+++||||||+++|||+|+|.|||||||||||||++|+|
T Consensus 6 ~~~~v~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~l~Mlpt~v~~lPtG~E~G~fLalDlGGTn~Rv~~V~L 85 (208)
T d1bdga1 6 LFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLSVTL 85 (208)
T ss_dssp HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSCCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEEE
T ss_pred HHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhcCCCCCccceeccccCCCCCCCccceEEEEEecCceEEEEEEEe
Confidence 444555667777899999999999999999999974 235899999999999999999999999999999999999999
Q ss_pred cCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEEeccC
Q 012386 115 GGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWT 194 (465)
Q Consensus 115 ~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li~wt 194 (465)
.|++.. ....++.|+||.+++.+++++||||||+||.+|+++++.. ++.+++|||||||++|+++++|+|++||
T Consensus 86 ~g~~~~-~~~~~~~~~ip~~~~~~~~~~lFd~iA~~i~~fl~~~~~~-----~~~l~lGfTFSFP~~Q~s~~~g~Li~wt 159 (208)
T d1bdga1 86 EGKGKS-PRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMK-----DKKFDLGFTFSFPCVQKGLTHATLVRWT 159 (208)
T ss_dssp CC-CCC-CEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCC-----SSCEEEEEEECSCEEEETTTEEEECCCC
T ss_pred cCCCcc-eEEEEEEeeCCHHHccCCHHHHHHHHHHHHHHHHHhcCCC-----CCccccEEEEcCccccCCCCcEEEEecc
Confidence 875432 2234458999999999999999999999999999987653 4679999999999999999999999999
Q ss_pred CccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCC
Q 012386 195 KGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK 243 (465)
Q Consensus 195 KgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~ 243 (465)
|||++++++|+||+++|+++|+|+++||+|+||+|||||||++++|.+|
T Consensus 160 KgF~~~gv~g~dv~~lL~~al~r~~~~v~v~aivNDTvgTL~a~ay~dP 208 (208)
T d1bdga1 160 KGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALEDP 208 (208)
T ss_dssp TTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTCT
T ss_pred ccccCCCccCCcHHHHHHHHHHhcCCCceEEEEEEccHHHHHhhhccCC
Confidence 9999999999999999999999999999999999999999999999876
|
| >d1czan3 c.55.1.3 (N:466-670) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-60 Score=441.54 Aligned_cols=198 Identities=42% Similarity=0.652 Sum_probs=181.3
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC--CCCCcceeccccccCCCCCcceeEEEEEeCCceEEEEEEEecCCc
Q 012386 41 LKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE--GGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGRE 118 (465)
Q Consensus 41 l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~--~~s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V~l~g~~ 118 (465)
++++.++|.++.++|++|+++|.+||++||+++ .+|+++||||||+++|||+|+|.|||||+|||||||++|+|.|++
T Consensus 5 ~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~l~Mlpt~v~~lPtG~E~G~fLalDlGGTn~Rv~~V~L~g~~ 84 (205)
T d1czan3 5 IEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRSGK 84 (205)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSSCCEECSCCSCCCSCCCEEEEEEEESSSSEEEEEEEEECST
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccCCCCCCCccceEEEEEecCceEEEEEEEecCCC
Confidence 344445567999999999999999999999864 258899999999999999999999999999999999999998776
Q ss_pred ceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEEeccCCccc
Q 012386 119 GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFS 198 (465)
Q Consensus 119 ~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li~wtKgF~ 198 (465)
.+++...++.|+||.+++.+++++||||||+||.+|+++++.. ++.+++|||||||++|+++++|.|++|||||+
T Consensus 85 ~~~~~~~~~~~~ip~~~~~~~~~eLFd~iA~~i~~fl~~~~~~-----~~~~~lGfTFSFP~~Q~s~~~g~Li~wtKgf~ 159 (205)
T d1czan3 85 KRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIK-----GPRMPLGFTFSFPCQQTSLDAGILITWTKGFK 159 (205)
T ss_dssp TCEEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCC-----SSCCEEEEEECSCEEEEETTEEEECCCCTTCC
T ss_pred CceEEEEeeeecCCHHHhcCCHHHHHHHHHHHHHHHHHhcCCC-----CCcccceEEEeceeeccCCCcEEEEEeeCcee
Confidence 6667667778999999999999999999999999999988753 46799999999999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHHHHc-CCCeeEEEEEechHHHhhcccccCC
Q 012386 199 IEDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNK 243 (465)
Q Consensus 199 ~~~~~g~dv~~~L~~al~~~-gl~v~v~alvNDtvatlla~~y~~~ 243 (465)
+++++|+||+++|++||+|+ ++||+|+||+|||||||++++|.+|
T Consensus 160 ~~~~~g~dv~~lL~~al~~r~~~~v~v~aivNDTvgTL~s~ay~dP 205 (205)
T d1czan3 160 ATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEP 205 (205)
T ss_dssp CBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCT
T ss_pred cCCcccchHHHHHHHHHHhcCCCCceEEEEEEhhHHHHHhhccCCC
Confidence 99999999999999999986 6999999999999999999999876
|
| >d1ig8a1 c.55.1.3 (A:18-224) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]
Probab=100.00 E-value=4.7e-59 Score=435.15 Aligned_cols=203 Identities=34% Similarity=0.589 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeccccccCCCCCcceeEEEEEeCCceEEEEEEEe
Q 012386 35 ARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQL 114 (465)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~~~s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V~l 114 (465)
+.+.+.+++++++|.+|.++|++|+++|.+||++||++++ ++++||||||.++|+|+|+|.|||||+|||||||++|+|
T Consensus 4 ~~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~-~~~~MlPt~v~~lPtG~E~G~flalDlGGTnlRv~~V~L 82 (207)
T d1ig8a1 4 KELMQQIENFEKIFTVPTETLQAVTKHFISELEKGLSKKG-GNIPMIPGWVMDFPTGKESGDFLAIDLGGTNLRVVLVKL 82 (207)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHSTTC-CSSCCEECCCCSCCCSCCEEEEEEEEECSSEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHccCC-CCCcceeeccCCCCCCCccceEEEEEecCceEEEEEEEE
Confidence 4566778999999999999999999999999999999865 789999999999999999999999999999999999999
Q ss_pred cCCcceeEEEEeeeeecCCCcc-cCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEEecc
Q 012386 115 GGREGRVVKQEFEEVSIPPHLM-TGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKW 193 (465)
Q Consensus 115 ~g~~~~i~~~~~~~~~ip~~~~-~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li~w 193 (465)
.|++. .....+++++|+.++ .++.++||||||+||.+|++++.... ..+.++||||||||++|+++++|.|++|
T Consensus 83 ~g~~~--~~~~~~~~~ip~~~~~~~~~~~lFd~iA~~i~~f~~e~~~~~---~~~~l~lGfTFSFP~~Q~~i~~g~Li~w 157 (207)
T d1ig8a1 83 GGDRT--FDTTQSKYRLPDAMRTTQNPDELWEFIADSLKAFIDEQFPQG---ISEPIPLGFTFSFPASQNKINEGILQRW 157 (207)
T ss_dssp ESSSC--EEEEEEEEECCTTGGGCSCTHHHHHHHHHHHHHHHHHHCTTC---CCSCEEEEEECCSSEECSBTTCCEECCC
T ss_pred cCCCc--eEEeeeeeeCCHHHhcCCcHHHHHHHHHHHHHHHHHHhcccc---cCCcceeEEEEeceeecCCCCcEEEEee
Confidence 88643 333335789999876 45688999999999999999876432 2567999999999999999999999999
Q ss_pred CCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCC
Q 012386 194 TKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK 243 (465)
Q Consensus 194 tKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~ 243 (465)
||||++++++|+||+++|+++|+|+|+||+|+||+|||||||++++|.+|
T Consensus 158 tKgF~~~~~~G~dv~~lL~~al~r~~~~v~v~aivNDTvgtL~a~~y~dP 207 (207)
T d1ig8a1 158 TKGFDIPNIENHDVVPMLQKQITKRNIPIEVVALINDTTGTLVASYYTDP 207 (207)
T ss_dssp CTTCCCTTCTTSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHCT
T ss_pred eccccccCcCCCcHHHHHHHHHHHcCCCceEEEEEEhhHHHHHhhccCCC
Confidence 99999999999999999999999999999999999999999999999876
|
| >d1v4sa1 c.55.1.3 (A:14-218) Glucokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Glucokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-58 Score=432.32 Aligned_cols=199 Identities=40% Similarity=0.672 Sum_probs=180.6
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC--CCCCcceeccccccCCCCCcceeEEEEEeCCceEEEEEEEecCC
Q 012386 40 ILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE--GGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGR 117 (465)
Q Consensus 40 ~l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~--~~s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V~l~g~ 117 (465)
+++++.++|.++.++|++|+++|.+||++||+++ ..|+++||||||+++|+|+|+|.|||||||||||||++|+|.++
T Consensus 2 ~v~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~ssl~MlPt~v~~lPtG~E~G~flalDlGGTn~Rv~~V~L~~~ 81 (205)
T d1v4sa1 2 LVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVKVGEG 81 (205)
T ss_dssp HHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSTTTTTTCSSCCEEEEEESCCCCCCCEEEEEEEESSSEEEEEEEEECCC
T ss_pred hHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccCCCCcceeeeeecccCCCCcccceEEEEecCCceEEEEEEEeCCC
Confidence 4677888888999999999999999999999854 35789999999999999999999999999999999999999643
Q ss_pred c--ceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEEeccCC
Q 012386 118 E--GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 195 (465)
Q Consensus 118 ~--~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li~wtK 195 (465)
+ ...++...+.|+||++++++++++||||||+||.+|+++++.. ++.+|+|||||||++|+++++|+|++|||
T Consensus 82 ~~~~~~~~~~~~~~~ip~~~~~~t~~~LFd~iA~~i~~fl~~~~~~-----~~~lplGfTFSFP~~Q~sl~~g~Li~wtK 156 (205)
T d1v4sa1 82 EEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMK-----HKKLPLGFTFSFPVRHEDIDKGILLNWTK 156 (205)
T ss_dssp SSSCCEEEEEEEEEECCSTTTSSBHHHHHHHHHHHHHHHHHTTTCT-----TCCCEEEEEECSCEEEEETTEEEECCCCT
T ss_pred CCCCceeEEEeecccCChhhccCCHHHHHHHHHHHHHHHHHhhCCC-----CCccccEEEEcCccccCCCCcEEEEEccc
Confidence 2 2344455568999999999999999999999999999987642 46799999999999999999999999999
Q ss_pred ccccCCCCCCcHHHHHHHHHHHcC-CCeeEEEEEechHHHhhcccccCC
Q 012386 196 GFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNK 243 (465)
Q Consensus 196 gF~~~~~~g~dv~~~L~~al~~~g-l~v~v~alvNDtvatlla~~y~~~ 243 (465)
||++++++|+||+++|+++++|++ +||+|+||+|||||||++++|.|+
T Consensus 157 gf~~~~~~g~dv~~lL~~al~r~~~~~v~v~aivNDTvgTL~s~ay~dn 205 (205)
T d1v4sa1 157 GFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDH 205 (205)
T ss_dssp TCCCBTCTTSBHHHHHHHHHTTTCSCCCEEEEEECHHHHHHHHHHTTCT
T ss_pred ccccCccccchHHHHHHHHHHhcCCCCceEEEEEEchHHHHHhhhccCC
Confidence 999999999999999999999986 899999999999999999999863
|
| >d1czan1 c.55.1.3 (N:16-222) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.7e-59 Score=434.07 Aligned_cols=197 Identities=36% Similarity=0.590 Sum_probs=181.6
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCC--CCCcceeccccccCCCCCcceeEEEEEeCCceEEEEEEEecCCc
Q 012386 41 LKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGRE 118 (465)
Q Consensus 41 l~~~~~~~~~~~~~L~~i~~~~~~em~~gL~~~~--~s~~~Mlpt~v~~lP~G~E~G~~LaiDlGGTNlRv~~V~l~g~~ 118 (465)
++++.++|.++.++|++|+++|.+||++||+++. .|+++||||||+++|+|+|+|.|||||||||||||++|+|.|++
T Consensus 7 v~~~l~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~i~Mlpt~v~~lP~G~E~G~flalDlGGTn~Rv~~V~L~g~~ 86 (207)
T d1czan1 7 IDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNHEK 86 (207)
T ss_dssp HHHHTGGGSCCHHHHHHHHHHHHHHHHHHHCTTTGGGCSSCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEEEEEET
T ss_pred HHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhcCCCCCcceeeeccccCCCCccccceEEEEecCCceEEEEEEEeCCCC
Confidence 3566667789999999999999999999998763 48899999999999999999999999999999999999998765
Q ss_pred ceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeeeecccccccCCceEEeccCCccc
Q 012386 119 GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFS 198 (465)
Q Consensus 119 ~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tfSfPv~q~~i~~g~Li~wtKgF~ 198 (465)
...+.+.++.|+||++++++++++||||||+||.+|+++++.. ++.+++|||||||++|+++++|+|++|||||+
T Consensus 87 ~~~~~~~~~~~~ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~-----~~~l~lGfTFSFP~~Q~sl~~g~Li~wtKgF~ 161 (207)
T d1czan1 87 NQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGFTFSFPCQQSKIDEAILITWTKRFK 161 (207)
T ss_dssp TEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCT-----TSCCCEEEEECSCEECSSTTCCEECCCCTTCC
T ss_pred CccEEEEEEeecCCHHHhcCCHHHHHHHHHHHHHHHHHhcCcC-----CCCCccEEEEcCeeccCCCCcEEEEeccccCc
Confidence 5566666678999999999999999999999999999988653 46899999999999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHHHHcC-CCeeEEEEEechHHHhhcccccC
Q 012386 199 IEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHN 242 (465)
Q Consensus 199 ~~~~~g~dv~~~L~~al~~~g-l~v~v~alvNDtvatlla~~y~~ 242 (465)
+++++|+||+++|+++|+|+| +||+|+||+|||||||++++|.|
T Consensus 162 ~~~v~G~dv~~lL~~al~r~~~~~v~v~aivNDTvgTL~s~aY~D 206 (207)
T d1czan1 162 ASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDD 206 (207)
T ss_dssp CBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHC
T ss_pred cCCCCCCcHHHHHHHHHHhcCCCCceEEEEEEchHHHHHHhhccC
Confidence 999999999999999999986 89999999999999999999976
|
| >d1bdga2 c.55.1.3 (A:223-460) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Blood fluke (Schistosoma mansoni) [TaxId: 6183]
Probab=100.00 E-value=3.9e-48 Score=370.37 Aligned_cols=202 Identities=32% Similarity=0.533 Sum_probs=187.8
Q ss_pred ceEEEEEEccccceeEEccCCCCcccCCC---------------------C-------------CCCCceeeeehhcccc
Q 012386 244 DAIAAVILGTGTNAAYVERAHAIPKWHGL---------------------L-------------PKSGEMIFEKIISGMY 289 (465)
Q Consensus 244 ~~~iglIlGTG~Na~yie~~~~i~k~~~~---------------------~-------------~~~g~~~fEkm~SG~Y 289 (465)
.|.||+|+|||+|+||+|+.++|+++++. + +++|.|+||||+||+|
T Consensus 1 rc~iGlIlGTG~Nacy~e~~~~i~k~~~~~~~~miIN~EwG~Fg~~~~l~lp~T~~D~~lD~~S~~pg~q~fEkmiSG~Y 80 (237)
T d1bdga2 1 KCAVGLIVGTGTNVAYIEDSSKVELMDGVKEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMY 80 (237)
T ss_dssp TEEEEEEESSSEEEEEEEETTTCGGGCSCSSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCTTHHHHSHHH
T ss_pred CceEEEEEeCCeeEEEEEEhhcCccccCCCCCcEEEEcccccCCCCCCCCCCCChHhHHHhhcCCCCCcchhhhhhhhcc
Confidence 48999999999999999999999988752 0 1356679999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHH
Q 012386 290 LGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIV 369 (465)
Q Consensus 290 LGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V 369 (465)
||||+|+++.++.+++.||++..|+.|..+++|+|++||.|+.|.++++..+..++.+.|+++.++.+|++.+++||+.|
T Consensus 81 LGEl~Rlil~~l~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~~l~~~~~~~~~~~~d~~~lr~i~~~V 160 (237)
T d1bdga2 81 LGELVRHIIVYLVEQKILFRGDLPERLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACEMV 160 (237)
T ss_dssp HHHHHHHHHHHHHHTTSSGGGCCCSGGGSTTCSCTTHHHHHTTCCTTCCHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCCCCcHhhcCCCccccHHHHHHHhCCCchHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHH
Q 012386 370 ATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGA 449 (465)
Q Consensus 370 ~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGA 449 (465)
++|||+|+|++|+|++++++. ++++|++|||+|++||.|++.++++++++++++ .+|+|++++|||++||
T Consensus 161 ~~RaA~L~Aa~iaai~~~~~~--------~~~~Vg~dGS~~~~~p~y~~~l~~~l~~l~~~~--~~i~l~~a~DGSg~GA 230 (237)
T d1bdga2 161 VKRAAYLAGAGIACILRRINR--------SEVTVGVDGSLYKFHPKFCERMTDMVDKLKPKN--TRFCLRLSEDGSGKGA 230 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC--------SEEEEEEESHHHHHCTTHHHHHHHHHHHHSCTT--CEEEEEECTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCC--------CceEEEEeCchhhcChhHHHHHHHHHHHHcCCC--ceEEEEEccCCcHHHH
Confidence 999999999999999999987 578999999999999999999999999987653 5799999999999999
Q ss_pred HHHHHH
Q 012386 450 ALLAAS 455 (465)
Q Consensus 450 Al~Aa~ 455 (465)
|++||.
T Consensus 231 Al~AA~ 236 (237)
T d1bdga2 231 AAIAAS 236 (237)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 999863
|
| >d1ig8a2 c.55.1.3 (A:225-486) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]
Probab=100.00 E-value=6.3e-48 Score=373.86 Aligned_cols=208 Identities=33% Similarity=0.547 Sum_probs=191.2
Q ss_pred ceEEEEEEccccceeEEccCCCCcccCCCC---------------------------------------CCCCceeeeeh
Q 012386 244 DAIAAVILGTGTNAAYVERAHAIPKWHGLL---------------------------------------PKSGEMIFEKI 284 (465)
Q Consensus 244 ~~~iglIlGTG~Na~yie~~~~i~k~~~~~---------------------------------------~~~g~~~fEkm 284 (465)
+|.||+|+|||+|+||+|+.++|+++++.. +++|.++||||
T Consensus 1 dt~iGlIlGTG~NacY~e~~~~i~k~~~~~~~~~~~~~~miINtEwG~F~~~~~~lp~T~~D~~lD~~S~~Pg~Q~fEKm 80 (262)
T d1ig8a2 1 ETKMGVIFGTGVNGAYYDVCSDIEKLQGKLSDDIPPSAPMAINCEYGSFDNEHVVLPRTKYDITIDEESPRPGQQTFEKM 80 (262)
T ss_dssp TEEEEEEESSSEEEEEEEEGGGCGGGTTCSCTTSCTTCEEEEECCGGGTTTTCSSSCCCHHHHHHHHHSSSTTSSHHHHH
T ss_pred CcEEEEEEeCcEEEEEEEEhhcCccccCcccccCCCCCcEEEEeeeccCCCCCccCCCChhhHHHhhcCCCCCCceeeee
Confidence 589999999999999999999999886421 12455699999
Q ss_pred hccccHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHH
Q 012386 285 ISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVE 364 (465)
Q Consensus 285 ~SG~YLGEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ 364 (465)
+||+|||||+|++++++.+++.||++..|+.|.++|+|+|++||.++.|++++++.+.+++++.+++ ++|.+|++.+++
T Consensus 81 iSG~YLGElvRlvl~~l~~~~~lF~~~~~~~L~~~~~l~t~~ls~i~~d~~~~~~~~~~~l~~~~~~-~~t~~d~~~vr~ 159 (262)
T d1ig8a2 81 SSGYYLGEILRLALMDMYKQGFIFKNQDLSKFDKPFVMDTSYPARIEEDPFENLEDTDDLFQNEFGI-NTTVQERKLIRR 159 (262)
T ss_dssp HCGGGHHHHHHHHHHHHHHTTSSSTTCCCTTTSSTTSSCTHHHHHHHHCCSTTCHHHHHHHHHHHCC-CCCHHHHHHHHH
T ss_pred hhhccHHHHHHHHHHHHHHhccccCCCCcHhhcCCCCccchhHhhhhcCCCccHHHHHHHHHHhcCC-CCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998 689999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCC----CccEEEEE
Q 012386 365 LCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEV----SETVVIEH 440 (465)
Q Consensus 365 ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~----~~~v~l~~ 440 (465)
||++|++|||+|+|++|+||++++++ ++++|++|||+|++||.|++.++++++++++... ..+|+|++
T Consensus 160 i~~~V~~RaA~L~Aa~iaai~~~~~~--------~~~~VavDGSv~~~~p~f~~~~~~~l~~l~~~~~~~~~~~~v~l~~ 231 (262)
T d1ig8a2 160 LSELIGARAARLSVCGIAAICQKRGY--------KTGHIAADGSVYNRYPGFKEKAANALKDIYGWTQTSLDDYPIKIVP 231 (262)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHTC--------SSEEEEEESHHHHHSTTHHHHHHHHHHHHHTCCCCSGGGCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCC--------CCcEEEEeeeeeecCccHHHHHHHHHHHHhhhhhccCCCceEEEEE
Confidence 99999999999999999999999987 5789999999999999999999999999986432 34799999
Q ss_pred eCChhHHHHHHHHHHhcccc
Q 012386 441 SNDGSGIGAALLAASHSQYL 460 (465)
Q Consensus 441 a~Dgs~iGAAl~Aa~~~~~~ 460 (465)
++|||++|||++||+++++.
T Consensus 232 a~DGSg~GAAl~Aa~a~~~~ 251 (262)
T d1ig8a2 232 AEDGSGAGAAVIAALAQKRI 251 (262)
T ss_dssp CCCTTTHHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHHHHHH
Confidence 99999999999999998764
|
| >d1czan4 c.55.1.3 (N:671-913) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.2e-48 Score=369.41 Aligned_cols=209 Identities=33% Similarity=0.490 Sum_probs=185.5
Q ss_pred ceEEEEEEccccceeEEccCCCCcccCCC---------------------------------CCCCCceeeeehhccccH
Q 012386 244 DAIAAVILGTGTNAAYVERAHAIPKWHGL---------------------------------LPKSGEMIFEKIISGMYL 290 (465)
Q Consensus 244 ~~~iglIlGTG~Na~yie~~~~i~k~~~~---------------------------------~~~~g~~~fEkm~SG~YL 290 (465)
.|.||+|||||+|+||+|+.++|+++++. .+++|.|+||||+||+||
T Consensus 1 tc~IGlIlGTGtNacY~e~~~~i~k~~~~~~~miIN~EwG~Fg~~~~l~~~~T~~D~~lD~~S~~pg~q~fEKmiSG~YL 80 (243)
T d1czan4 1 TCEVGLIVGTGSNACYMEEMKNVEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYL 80 (243)
T ss_dssp TEEEEEEESSSEEEEEEEETTTCTTSSCCSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSTTTTSCTTGGGTSTTTH
T ss_pred CceEEEEEeCCceEEEEEEcccCccccCCCCcEEEEeeecCCCCCCccccccCHHhHHhhhcCCCCccchHHHHHccccH
Confidence 38899999999999999999999988752 023577799999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHH
Q 012386 291 GEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVA 370 (465)
Q Consensus 291 GEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~ 370 (465)
|||+|+++.++.+++.||++..|+.|.++|+|+|++||.++.|.++.. .++.+++. +++ ++|.+|++.+++||+.|+
T Consensus 81 GElvRlil~~l~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~-~~~~i~~~-~~~-~~s~~d~~~lr~i~~~V~ 157 (243)
T d1czan4 81 GEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALL-QVRAILQQ-LGL-NSTCDDSILVKTVCGVVS 157 (243)
T ss_dssp HHHHHHHHHHHHHTTSSGGGCCCTTTTSTTCSCHHHHHHHTCSSCCHH-HHHHHHHH-HTC-CCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccCCCCcHHHcCCCCcccHHHHHHHcCCchHH-HHHHHHHH-hCC-CCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999987655 56777765 888 589999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHH
Q 012386 371 TRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAA 450 (465)
Q Consensus 371 ~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAA 450 (465)
+|||+|+|++|+||++++++... ...+.++|++|||+|++||.|++.++++++++.++ .+|+|++++|||++|||
T Consensus 158 ~RAA~L~Aa~iaail~~~~~~~~--~~~~~~~V~~dGSv~~~~p~f~~~~~~~l~~l~~~---~~i~l~~~~DGSg~GAA 232 (243)
T d1czan4 158 RRAAQLCGAGMAAVVDKIRENRG--LDRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPK---CNVSFLLSEDGSGKGAA 232 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT--CSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHSTT---EEEEEEECSSCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccC--CCCCccEEEEECcceecCchHHHHHHHHHHHhCCC---CcEEEEEccCccHHHHH
Confidence 99999999999999999865311 12246899999999999999999999999998654 58999999999999999
Q ss_pred HHHHHhcccc
Q 012386 451 LLAASHSQYL 460 (465)
Q Consensus 451 l~Aa~~~~~~ 460 (465)
++||+++|.+
T Consensus 233 l~Aa~a~r~~ 242 (243)
T d1czan4 233 LITAVGVRLR 242 (243)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999998753
|
| >d1v4sa2 c.55.1.3 (A:219-461) Glucokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Glucokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-47 Score=367.17 Aligned_cols=208 Identities=26% Similarity=0.462 Sum_probs=184.6
Q ss_pred ceEEEEEEccccceeEEccCCCCcccCCC---------------------------------CCCCCceeeeehhccccH
Q 012386 244 DAIAAVILGTGTNAAYVERAHAIPKWHGL---------------------------------LPKSGEMIFEKIISGMYL 290 (465)
Q Consensus 244 ~~~iglIlGTG~Na~yie~~~~i~k~~~~---------------------------------~~~~g~~~fEkm~SG~YL 290 (465)
.|.||+|+|||+|+||+|+.++|++|++. .+++|.|+||||+||+||
T Consensus 1 ~c~iGlIlGTG~Nacy~e~~~~i~k~~~~~~~miINtEwG~fg~~~~l~~~~T~~D~~lD~~s~~Pg~q~fEKmiSG~YL 80 (243)
T d1v4sa2 1 QCEVGMIVGTGCNACYMEEMQNVELVEGDEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYM 80 (243)
T ss_dssp TEEEEEEESSSEEEEEEEEGGGCTTSSCCSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCHHHHHHCTTTH
T ss_pred CceEEEEEeCCeEEEEEEEcccCcccCCCCCcEEEEccccccCCCCCCccCcCHHHHHHHhCCCCCCccchhHhHhhhhH
Confidence 48999999999999999999999988752 013567799999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHH
Q 012386 291 GEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVA 370 (465)
Q Consensus 291 GEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~ 370 (465)
|||+|++++++.+++.||++..|+.|.++|+|+|++||.|+.|+++.. ....++.. +++ .++.+|++.+++||++|+
T Consensus 81 GElvRlil~~l~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~-~~~~~l~~-~~~-~~s~~d~~~lr~i~~~v~ 157 (243)
T d1v4sa2 81 GELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDRK-QIYNILST-LGL-RPSTTDCDIVRRACESVS 157 (243)
T ss_dssp HHHHHHHHHHHHHTTCSGGGCCCTGGGSTTCSCHHHHHHHTTCCSSSH-HHHHHHHH-TTC-CCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccccCCCCcHHhcCCCCcccHHHHHHhcCCccHH-HHHHHHHh-cCC-CCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999876554 56667654 888 478999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHH
Q 012386 371 TRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAA 450 (465)
Q Consensus 371 ~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAA 450 (465)
+|||+|+|++|+||++++++... ...++++|++|||+|++||.|++.++++++++++. .+|+|++++|||++|||
T Consensus 158 ~RaA~L~Aa~i~ail~~~~~~~~--~~~~~~~V~~dGSv~~~~p~y~~~l~~~l~~l~~~---~~i~l~~~~DgSg~GAA 232 (243)
T d1v4sa2 158 TRAAHMCSAGLAGVINRMRESRS--EDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPS---CEITFIESEEGSGRGAA 232 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC--SSSEEEEEEEECHHHHHSTTHHHHHHHHHHHHCTT---EEEEEEECSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccC--CCCcceEEEecchhhhcCchHHHHHHHHHHHhCCC---CcEEEEECCCccHHHHH
Confidence 99999999999999999987432 22357899999999999999999999999999853 57999999999999999
Q ss_pred HHHHHhccc
Q 012386 451 LLAASHSQY 459 (465)
Q Consensus 451 l~Aa~~~~~ 459 (465)
++||+++|+
T Consensus 233 l~Aa~a~~~ 241 (243)
T d1v4sa2 233 LVSAVACKK 241 (243)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999999875
|
| >d1czan2 c.55.1.3 (N:223-465) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-47 Score=367.91 Aligned_cols=209 Identities=31% Similarity=0.483 Sum_probs=185.5
Q ss_pred ceEEEEEEccccceeEEccCCCCcccCCC------------C---------------------CCCCceeeeehhccccH
Q 012386 244 DAIAAVILGTGTNAAYVERAHAIPKWHGL------------L---------------------PKSGEMIFEKIISGMYL 290 (465)
Q Consensus 244 ~~~iglIlGTG~Na~yie~~~~i~k~~~~------------~---------------------~~~g~~~fEkm~SG~YL 290 (465)
+|.||+|+|||||+||+|+.++|+++++. + +++|.++||||+||+||
T Consensus 1 ~c~iGlIlGTGtNacy~e~~~~i~~~~~~~~~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~~Pg~q~fEKmiSG~YL 80 (243)
T d1czan2 1 HCEVGLIIGTGTNACYMEELRHIDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYL 80 (243)
T ss_dssp TEEEEEEESSSEEEEEEEEGGGCTTSSCCSSEEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTHHHHSHHHH
T ss_pred CceEEEEEeCCceEEEEeEcccCCcccCCCCcEEEEeccccCCCCCcccccCChHHHHHhhcCCCCCCcchhhhhccccH
Confidence 58999999999999999999999888642 0 13567799999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHH
Q 012386 291 GEIVRRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVA 370 (465)
Q Consensus 291 GEi~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~ 370 (465)
|||+|+++.++.+++.||++..++.|.++++|+|++++.++.|. ++...++.+++. +++ .++.+|++.+++||++|+
T Consensus 81 GElvRlvl~~l~~~~~lF~~~~~~~l~~~~~l~t~~~s~i~~d~-~~~~~~~~il~~-~~~-~~s~~d~~~lr~i~~~v~ 157 (243)
T d1czan2 81 GELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNK-EGLHNAKEILTR-LGV-EPSDDDCVSVQHVCTIVS 157 (243)
T ss_dssp HHHHHHHHHHHHHTTSSGGGCCCTTTTSTTSSCHHHHHHHTCTT-THHHHHHHHHHH-TTC-CCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccCCCCCHHHcCCCCcCchHHHHHhcCC-hhHHHHHHHHHH-cCC-CCCHHHHHHHHHHHHHHH
Confidence 99999999999999999998889999999999999999999885 556678888875 888 588999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHH
Q 012386 371 TRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAA 450 (465)
Q Consensus 371 ~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAA 450 (465)
+|||+|+|++|+||+++++.... ...++++|++|||+|++||.|++.+++++++++++ .+|.|++++||||+|||
T Consensus 158 ~RAA~L~Aa~iaail~~~~~~~~--~~~~~~~Va~dGSv~~~~p~f~~~~~~~l~~l~~~---~~v~~~~~~DGSg~GAA 232 (243)
T d1czan2 158 FRSANLVAATLGAILNRLRDNKG--TPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPD---SDVRFLLSESGSGKGAA 232 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT--CSSEEEEEEEECHHHHHCSSHHHHHHHHHHHHCTT---EEEEEEECTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccC--CCCcceEEEEechhhhhCchHHHHHHHHHHHHCCC---CceEEEEccCCcHHHHH
Confidence 99999999999999999864211 12357899999999999999999999999999864 47999999999999999
Q ss_pred HHHHHhcccc
Q 012386 451 LLAASHSQYL 460 (465)
Q Consensus 451 l~Aa~~~~~~ 460 (465)
++||+++|++
T Consensus 233 l~Aa~a~r~~ 242 (243)
T d1czan2 233 MVTAVAYRLA 242 (243)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999999764
|
| >d1sz2a1 c.55.1.7 (A:3-321) Glucokinase Glk {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Glucokinase domain: Glucokinase Glk species: Escherichia coli [TaxId: 562]
Probab=99.70 E-value=4.3e-16 Score=152.09 Aligned_cols=272 Identities=13% Similarity=0.106 Sum_probs=158.5
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
|||++|+||||+|+++|+..++ .+... +..+.+ +.+++ .+.|++++++.+. +...+|++
T Consensus 2 y~L~~DIGGT~ir~glvd~~~~---~i~~~-~~~~~~------~~~~~----~~~i~~~~~~~~~-------~~~~igI~ 60 (319)
T d1sz2a1 2 YALVGDVGGTNARLALCDIASG---EISQA-KTYSGL------DYPSL----EAVIRVYLEEHKV-------EVKDGCIA 60 (319)
T ss_dssp EEEEEEEETTEEEEEEEETTTC---CEEEE-EEEEGG------GCSCH----HHHHHHHHHHSCC-------CCCEEEEE
T ss_pred EEEEEEEChhheeeEEEECCCC---EEEEE-EEeCCC------CHhHH----HHHHHHHHHhcCC-------CcceEEEE
Confidence 7899999999999999987664 33322 122222 12333 3456677776542 36779999
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccc------------cCC
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY------------HNK 243 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y------------~~~ 243 (465)
+|+|++.. .+.+..++. ..+....++..+ ..+ +.+.||..+......+ .+.
T Consensus 61 ~pG~vd~~---~~~~~~~~~--------~~~~~~~~~~~~---~~~---v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (319)
T d1sz2a1 61 IACPITGD---WVAMTNHTW--------AFSIAEMKKNLG---FSH---LEIINDFTAVSMAIPMLKKEHLIQFGGAEPV 123 (319)
T ss_dssp ESSCCCSS---EECCSSSCC--------CEEHHHHHHHHT---CSE---EEEEEHHHHHHHHGGGCCGGGEEECSSCCCC
T ss_pred cccCCCCC---ccccccccc--------ccChHHHHHhhc---ccc---eeecceeeeeehhhhhhhhhhHHhhCcccCC
Confidence 99999753 333322211 234555554433 345 4899999988877653 245
Q ss_pred ceEEEEEEccccceeEEccCCCCcccCC---CC-----CCC--------------C-ceeeeehhccccHHHHHHHHHHH
Q 012386 244 DAIAAVILGTGTNAAYVERAHAIPKWHG---LL-----PKS--------------G-EMIFEKIISGMYLGEIVRRVLCR 300 (465)
Q Consensus 244 ~~~iglIlGTG~Na~yie~~~~i~k~~~---~~-----~~~--------------g-~~~fEkm~SG~YLGEi~R~~l~~ 300 (465)
+..+.+++|||++++.......+.++.+ ++ ... + .-|+|.++||+.|-++.+.....
T Consensus 124 ~~~~~~~i~~g~G~g~~~~~~~~~g~~~~agE~G~~~~~~~~~~~~~~~~~~~~~g~~g~~E~~~Sg~~l~~~~~~~~~~ 203 (319)
T d1sz2a1 124 EGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKA 203 (319)
T ss_dssp TTCCEEEEEESSSEEEEEEEEETTEEEEEECCGGGSBCCCCSHHHHHHHHHHHHHSSSCBGGGTSSHHHHHHHHHHHHHH
T ss_pred CcceEEEEcccccceEEEEecccCCcccccccccccccCCcchhhccchhhhhhcCCcceeeeeccchhHHHHHHHHHhh
Confidence 6677778888887777766655544432 11 111 1 11899999999996665554332
Q ss_pred HhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012386 301 MAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAG 380 (465)
Q Consensus 301 ~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aag 380 (465)
. ..+.. . . .+.+...+. ....+..++.+.++.+.++...
T Consensus 204 ---~------~~~~~----~-~-------------~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~ 242 (319)
T d1sz2a1 204 ---D------NRLPE----N-L-------------KPKDITERA--------------LADSCTDCRRALSLFCVIMGRF 242 (319)
T ss_dssp ---T------TCCCC----C-C-------------CHHHHHHHH--------------HHTCCHHHHHHHHHHHHHHHHH
T ss_pred ---c------CCCch----h-c-------------cchHHHHHH--------------hhcchHHHHHHHHHHHHHHHHH
Confidence 1 10100 0 0 011111111 2334567778888888888888
Q ss_pred HHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHH--HHHHHHHHHh-ccC--CCccEEEEEeCChhHHHHHHHHHH
Q 012386 381 IVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSA--CMQSTVKELL-GEE--VSETVVIEHSNDGSGIGAALLAAS 455 (465)
Q Consensus 381 iaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~--~l~~~l~~~~-~~~--~~~~v~l~~a~Dgs~iGAAl~Aa~ 455 (465)
++.++..+.+. + .|.+.||+......+.. .+.+.+.+.. .+. ....|.+.+.+|++++|||..|.-
T Consensus 243 ~~~~~~~~~~~-------~--~ivigGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~dagl~GAa~~a~~ 313 (319)
T d1sz2a1 243 GGNLALNLGTF-------G--GVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQ 313 (319)
T ss_dssp HHHHHHHHTCT-------T--EEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEECCSCHHHHHHHHHHHH
T ss_pred HHhhhheecCC-------C--CcEEecchhhhhhhhhchHHHHHHHHhccchhhHhhCCcEEEEECCchhHHHHHHHHHH
Confidence 88777777652 2 46678888776543332 2233332210 000 112455566799999999988754
|
| >d2ap1a2 c.55.1.10 (A:1-117) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Putative regulator protein YcfX species: Salmonella typhimurium [TaxId: 90371]
Probab=99.65 E-value=5.4e-16 Score=130.28 Aligned_cols=115 Identities=17% Similarity=0.259 Sum_probs=91.8
Q ss_pred EEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeee
Q 012386 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTF 176 (465)
Q Consensus 97 ~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tf 176 (465)
|||||+|||++|++++++.|+ ++.+. +++.|.. ..+++++.|.+.++++..+.+ ....+|+++
T Consensus 2 yiGiDiGgT~i~~~l~d~~g~---i~~~~--~~~t~~~----~~~~~~~~i~~~i~~~~~~~~--------~~~~igi~~ 64 (117)
T d2ap1a2 2 YYGFDIGGTKIALGVFDSTRR---LQWEK--RVPTPHT----SYSAFLDAVCELVEEADQRFG--------VKGSVGIGI 64 (117)
T ss_dssp EEEEEECSSEEEEEEEETTCC---EEEEE--EEECCCS----CHHHHHHHHHHHHHHHHHHHT--------SCCEEEEEE
T ss_pred EEEEEECcceEEEEEEeCCCC---EEEEE--EEeeccc----CHHHHHHHHHHHHHHHHhhcC--------cceeEEEec
Confidence 899999999999999999885 66544 4565543 577899999999999887654 256899999
Q ss_pred ecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccccc
Q 012386 177 SFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH 241 (465)
Q Consensus 177 SfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~ 241 (465)
|+|++.. .+.+ .+. +.+++.|.|+.+.|++.| ++|| .+.||+++..++|+|.
T Consensus 65 pG~vd~~---~g~i-~~~---~~~~w~~~~l~~~l~~~~---~~pv---~l~NDan~aalaE~w~ 116 (117)
T d2ap1a2 65 PGMPETE---DGTL-YAA---NVPAASGKPLRADLSARL---DRDV---RLDNDANCFALSEAWD 116 (117)
T ss_dssp SSBSCCT---TSCC-BCT---TCTTTTTSCHHHHHHHHH---TSCE---EEEEHHHHHHHHHHTS
T ss_pred CCccccc---ccee-ecc---CccccCCCcHHHHHHHHh---CCCE---EEEeHHHhhHhhcccc
Confidence 9999753 3332 233 345555899999999999 9997 9999999999999985
|
| >d2hoea3 c.55.1.10 (A:72-199) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: N-acetylglucosamine kinase species: Thermotoga maritima [TaxId: 2336]
Probab=99.57 E-value=7.4e-15 Score=125.05 Aligned_cols=124 Identities=10% Similarity=0.130 Sum_probs=98.0
Q ss_pred cceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCccee
Q 012386 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (465)
Q Consensus 93 E~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~l 172 (465)
+.+++||||+|||++|++++++.|+ ++.+. .+++|.. .+.+++++.+.+.+.++++..+... .+...+
T Consensus 2 ~~~~~igidig~~~i~~~l~d~~G~---il~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~~~~----~~i~gi 69 (128)
T d2hoea3 2 NCAYVLGIEVTRDEIAACLIDASMN---ILAHE--AHPLPSQ---SDREETLNVMYRIIDRAKDMMEKLG----SKLSAL 69 (128)
T ss_dssp GGCEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCSS---CCHHHHHHHHHHHHHHHHHHHHHTT----CCCCEE
T ss_pred CcEEEEEEEECCCEEEEEEEcCCCC---EEEEE--EEecccC---CCHHHHHHHHHHHHHHHHHHhcccc----CceEEE
Confidence 3568999999999999999999985 76544 5566654 4678899999999999988654322 467899
Q ss_pred eeeeeccccccc--CCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCC
Q 012386 173 GFTFSFPVRQTS--IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK 243 (465)
Q Consensus 173 G~tfSfPv~q~~--i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~ 243 (465)
|+++|+|++... +.....+.|. +.|+.+.|++.+ ++|| .+.||+++.+++|.|++.
T Consensus 70 gi~~pG~vd~~~g~i~~~~~l~w~---------~~~l~~~l~~~~---~~pv---~i~NDa~~~alaE~~fG~ 127 (128)
T d2hoea3 70 TVAAPGPIDTERGIIIDPRNFPLS---------QIPLANLLKEKY---GIEV---WVENDADMGAVGEKWYTK 127 (128)
T ss_dssp EEEESSCEETTTTEECCCSSCTTB---------TSCHHHHHHHHH---CSEE---EEEEHHHHHHHHHHHHTT
T ss_pred ecceeeeEcCCCCEEEeecccccc---------CCchHHHHHHHc---CCCE---EEEeHHHHHHHHHHHhcC
Confidence 999999997542 2233333554 799999999999 9996 999999999999998653
|
| >d1z05a2 c.55.1.10 (A:209-405) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Transcriptional regulator VC2007 species: Vibrio cholerae [TaxId: 666]
Probab=99.56 E-value=1.5e-14 Score=132.22 Aligned_cols=164 Identities=15% Similarity=0.127 Sum_probs=120.9
Q ss_pred CCceEEEEEEccccceeEEccCCCCcccCCC--------CCCC------Cce-eeeehhccccHHHHHHHHHHHHhhccc
Q 012386 242 NKDAIAAVILGTGTNAAYVERAHAIPKWHGL--------LPKS------GEM-IFEKIISGMYLGEIVRRVLCRMAEEAN 306 (465)
Q Consensus 242 ~~~~~iglIlGTG~Na~yie~~~~i~k~~~~--------~~~~------g~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~ 306 (465)
|-++++.+++|||++++++.+++.+.+.++. ++++ |.. |+|.++|+..|-+.++..... .
T Consensus 1 d~~n~v~i~igtGiG~giv~~g~l~~G~~g~AGEiGh~~v~~~g~~c~cG~~GclE~~~S~~al~~~~~~~~~~---~-- 75 (197)
T d1z05a2 1 DVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQGKRCHCGNYGCLETVASSQAIRDQVTARIQA---G-- 75 (197)
T ss_dssp TCSSEEEEEESSSEEEEEEETTEECCTTTTCTTBCTTSBCCTTCCBCTTSCBSBTHHHHSHHHHHHHHHHHHHT---T--
T ss_pred CCccEEEEEECCCEEEEEEECCEEEeCCCCCCcccccCccccccccccCCCCCchHHHhcHHHHHHHHHHHHhc---C--
Confidence 3578999999999999999999988876542 1222 222 999999999995544432221 1
Q ss_pred CCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012386 307 FFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILK 386 (465)
Q Consensus 307 lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~ 386 (465)
.++.+..... . ..+++++. ++..++.|..+++++++++|.+|+++++
T Consensus 76 -----~~~~~~~~~~--------------~---~~~~l~~~-----------a~~gd~~a~~~~~~~~~~la~~i~nl~~ 122 (197)
T d1z05a2 76 -----EPSCLATVEE--------------I---SIEDICAA-----------AADGDPLAVDVIQQLGRYLGAAIAIVIN 122 (197)
T ss_dssp -----CCCTTTTCSS--------------C---CHHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----Cccccccchh--------------c---CHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHhHHH
Confidence 1111111000 1 12334443 7788899999999999999999999999
Q ss_pred HhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHHHH
Q 012386 387 KLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLA 453 (465)
Q Consensus 387 ~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~A 453 (465)
.++| + .|+++|++....+.|.+.+++.+++...+.....++|+.+ +|++.+|||+++
T Consensus 123 ~ldP--------~--~IviGG~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~I~~s~lg~~a~~~GAA~l~ 182 (197)
T d1z05a2 123 LFNP--------E--KILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQATMPGAALIK 182 (197)
T ss_dssp HHCC--------S--EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSCTTHHHHHHHH
T ss_pred hcCC--------C--EEEEecchHHhhHHHHHHHHHHHHHhcccccCCCCEEEECCCCCcHHHHHHHHHH
Confidence 9999 4 6788999999999999999999998765433345677776 899999999886
|
| >d1woqa1 c.55.1.10 (A:11-139) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Inorganic polyphosphate/ATP-glucomannokinase PPGMK species: Arthrobacter sp. KM [TaxId: 184230]
Probab=99.53 E-value=3e-14 Score=121.27 Aligned_cols=122 Identities=16% Similarity=0.195 Sum_probs=89.3
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
..||||+|||++|++++++.++ .++.+. .+++.|.. .+.+.+++.|.+.+.++.+..... .+...+|++
T Consensus 3 ~vlGiDiGgT~i~~~l~d~~~g--~i~~~~-~~~~t~~~---~~~~~~~~~i~~~~~~l~~~~~~~-----~~~~gIGi~ 71 (129)
T d1woqa1 3 PLIGIDIGGTGIKGGIVDLKKG--KLLGER-FRVPTPQP---ATPESVAEAVALVVAELSARPEAP-----AAGSPVGVT 71 (129)
T ss_dssp CEEEEEECSSEEEEEEEETTTT--EEEEEE-EEEECCSS---CCHHHHHHHHHHHHHHHHTSTTCC-----CTTCCEEEE
T ss_pred CEEEEEECcceEEEEEEECCCC--EEEEEE-eecccccC---CCHHHHHHHHHHHHHHHHhccccc-----cccceeeec
Confidence 5899999999999999998654 344322 23454443 467889999999988876544321 346789999
Q ss_pred eecccccccCCceEEe-ccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccC
Q 012386 176 FSFPVRQTSIASGDLI-KWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN 242 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li-~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~ 242 (465)
+|+|++.. ... .++ ..+++.+.|+.+.|++.+ ++|| .+.||+++.+++|+|.+
T Consensus 72 ~pG~vd~~-----~~~~~~~---~~~~w~~~~l~~~l~~~~---~~pv---~i~NDan~aalgE~~~G 125 (129)
T d1woqa1 72 FPGIIQHG-----VVHSAAN---VDKSWLNTDIDALLTARL---GRPV---EVINDADAAGLAEARYG 125 (129)
T ss_dssp ESSCEETT-----EECCCTT---SCGGGTTCBHHHHHHHHH---TSCE---EEEEHHHHHHHHHHHHS
T ss_pred ceeeEecC-----eEEEecc---cCCCcccccchhhHHHhc---CCcE---EEEEhHHHHHHHHHhhc
Confidence 99999742 211 111 113345899999999999 9997 89999999999999864
|
| >d1z6ra2 c.55.1.10 (A:82-210) Mlc protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Mlc protein species: Escherichia coli [TaxId: 562]
Probab=99.53 E-value=4.8e-14 Score=120.09 Aligned_cols=126 Identities=13% Similarity=0.168 Sum_probs=99.4
Q ss_pred CcceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcce
Q 012386 92 DEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (465)
Q Consensus 92 ~E~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~ 171 (465)
+|..+||+||+|+|+++++++++.|+ ++.+. .+++|.. +.+++.+.|.+.|.+|+++.+... .+...
T Consensus 1 te~~~~l~i~i~~~~i~~~l~Dl~G~---~l~~~--~~~~~~~----~~~~~~~~l~~~i~~~l~~~~~~~----~~i~g 67 (129)
T d1z6ra2 1 TEAWHYLSLRISRGEIFLALRDLSSK---LVVEE--SQELALK----DDLPLLDRIISHIDQFFIRHQKKL----ERLTS 67 (129)
T ss_dssp CTTCEEEEEEEETTEEEEEEEETTCC---EEEEE--EEECCSS----CSSCHHHHHHHHHHHHHHHTGGGC----CCEEE
T ss_pred CCceEEEEEEECCCEEEEEEEcCCCC---EEEEE--Eeecccc----chhHHHHHHHHHHHHHHHhcCccc----cccee
Confidence 46789999999999999999999995 66544 4566543 466789999999999998865432 46789
Q ss_pred eeeeeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccC
Q 012386 172 LGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN 242 (465)
Q Consensus 172 lG~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~ 242 (465)
+|+++|+|++.. .+.+...+ +++++.+.|+.+.|++.+ ++|| .+.||+++.+++|+|.+
T Consensus 68 Igi~~pG~v~~~---~~~~~~~~---~~~~w~~~~l~~~l~~~~---~~pV---~~~NDa~a~alaE~~~G 126 (129)
T d1z6ra2 68 IAITLPGIIDTE---NGIVHRMP---FYEDVKEMPLGEALEQHT---GVPV---YIQHDISAWTMAEALFG 126 (129)
T ss_dssp EEEEESSEEETT---TTEEEECT---TCTTCSSBCHHHHHHHHH---SSCE---EEEEHHHHHHHHHHHHS
T ss_pred EEEeeeeeeeec---ccceeccC---cchhccCcchHHHHHHhc---CCCE---EEEehHHHHHHHHHhhC
Confidence 999999999753 33333222 334455899999999999 9996 99999999999999864
|
| >d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: N-acetylmannosamine kinase NanK species: Escherichia coli [TaxId: 562]
Probab=99.52 E-value=1.7e-14 Score=121.56 Aligned_cols=113 Identities=16% Similarity=0.190 Sum_probs=83.2
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
++|+||+||||+|+++++++|+ ++.+. +++.|.. .+.+.+++.|.+.++++. .+...+|++
T Consensus 2 ~~lgiDiGgT~i~~~l~d~~G~---i~~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~-----------~~~~~igI~ 62 (119)
T d2aa4a1 2 TTLAIDIGGTKLAAALIGADGQ---IRDRR--ELPTPAS---QTPEALRDALSALVSPLQ-----------AHAQRVAIA 62 (119)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEEE--EEECCSS---CCHHHHHHHHHHHHTTTG-----------GGCSEEEEE
T ss_pred eEEEEEeCcCEEEEEEEcCCCC---EEEeE--EEecccc---CcHHHHHHHHHHHHHHhh-----------ccCceEEEE
Confidence 4799999999999999999884 66544 4566654 356677777766555431 235689999
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhccc
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGR 239 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~ 239 (465)
+|+|++..+ +.+ .... +++++.+.|+.+.|++.| ++|| .+.||+++.+++|+
T Consensus 63 ~pG~v~~~~---~~~-~~~~--~l~~w~~~~l~~~l~~~~---~~pv---~i~NDanaaalgE~ 114 (119)
T d2aa4a1 63 STGIIRDGS---LLA-LNPH--NLGGLLHFPLVKTLEQLT---NLPT---IAINDAQAAAWAEF 114 (119)
T ss_dssp ESSEEETTE---EEC-SSGG--GGGGGTTCCHHHHHHHHH---CSCE---EEEEHHHHHHHHHH
T ss_pred eeeeEcCCC---cEE-EccC--ccccccCCCHHHHHHHHh---CCCE---EEEehHHHHHHHHH
Confidence 999997532 222 1111 334455899999999999 9997 99999999999993
|
| >d1z05a3 c.55.1.10 (A:81-208) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Transcriptional regulator VC2007 species: Vibrio cholerae [TaxId: 666]
Probab=99.50 E-value=5.7e-14 Score=119.24 Aligned_cols=121 Identities=18% Similarity=0.235 Sum_probs=94.7
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
.||+||+|+|+++++++++.|+ ++.+. ++++|.. +.+++.+.|.+.|.+++++.+... .+...+|++
T Consensus 5 ~~lgi~ig~~~i~~~l~d~~G~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~~~~----~~i~gIgi~ 71 (128)
T d1z05a3 5 QFLSMRLGRGYLTIALHELGGE---VLIDT--KIDIHEI----DQDDVLARLLFEIEEFFQTYAAQL----DRVTSIAIT 71 (128)
T ss_dssp EEEEEEEETTEEEEEEEETTSC---EEEEE--EEECCCC----BHHHHHHHHHHHHHHHHHHTTTTC----CEEEEEEEE
T ss_pred EEEEEEECCCEEEEEEEcCCCC---EEEEE--EeccccC----CHHHHHHHHHHHHHHHHHHccccc----ccceEEEee
Confidence 6999999999999999999995 66544 4566643 457899999999999999876532 457899999
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccC
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN 242 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~ 242 (465)
+|+|++... +.+ .|.. ..++.+.|+.+.|++.+ ++|| .+.||+++.+++|++.+
T Consensus 72 ~pG~vd~~~---~~~-~~~~---~~~~~~~~l~~~l~~~~---~~PV---~l~NDana~a~aE~~~G 125 (128)
T d1z05a3 72 LPGLVNSEQ---GIV-LQMP---HYNVKNLALGPEIYKAT---GLPV---FVANDTRAWALAEKLFG 125 (128)
T ss_dssp ESSEEETTT---TEE-EECS---SSBCSSBCHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHS
T ss_pred eeeeeeccc---eee-eccc---cCCCCCcchHHHHHHhc---CCCE---EEEehHHHHHHHHHhhC
Confidence 999997532 222 2221 11234799999999999 9997 99999999999999865
|
| >d2gupa1 c.55.1.10 (A:1-114) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Hypothetical protein SP2142 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.50 E-value=3.4e-14 Score=119.05 Aligned_cols=113 Identities=17% Similarity=0.255 Sum_probs=77.7
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeee
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~t 175 (465)
++++||+|||++|+++++.+|+ ++.+. +++.|+ +.+++. +.|.+++++ .+...+|++
T Consensus 2 ~i~~iDiGgT~i~~~l~d~~g~---i~~~~--~~~t~~-----~~~~~~----~~i~~~~~~---------~~i~gIGi~ 58 (114)
T d2gupa1 2 TIATIDIGGTGIKFASLTPDGK---ILDKT--SISTPE-----NLEDLL----AWLDQRLSE---------QDYSGIAMS 58 (114)
T ss_dssp CEEEEEEETTEEEEEEECTTCC---EEEEE--EECCCS-----SHHHHH----HHHHHHHTT---------SCCSEEEEE
T ss_pred eEEEEEeCcccEEEEEEcCCCC---EEEEE--EEcccc-----cHHHHH----HHHHHHhhh---------cccceEEEe
Confidence 4789999999999999999884 66543 344443 233444 444555543 236789999
Q ss_pred eecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccCCc
Q 012386 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKD 244 (465)
Q Consensus 176 fSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~~~ 244 (465)
+|+|++.. +|.+..-+ +++.+.+.++.+.|+ .| ++|| .+.||++++.++|.|.+|+
T Consensus 59 ~pG~vd~~---~g~i~~~~---~l~~~~~~~l~~~l~-~~---~~pV---~veNDanaaalgE~~~~p~ 114 (114)
T d2gupa1 59 VPGAVNQE---TGVIDGFS---AVPYIHGFSWYEALS-SY---QLPV---HLENDANCVGLSELLAHPE 114 (114)
T ss_dssp ESSEECTT---TCBEESCC---SSGGGSSSBHHHHTG-GG---CCCE---EEEEHHHHHHHHHHHHCTT
T ss_pred ccccccCC---ccEEEccc---ccCcccCCcHHHHHH-hC---CCCE---EEEhHHHHHHHHHHHHCcC
Confidence 99999643 23221111 223334789988885 47 9997 9999999999999887763
|
| >d1xc3a1 c.55.1.10 (A:1-118) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Putative fructokinase YhdR species: Bacillus subtilis [TaxId: 1423]
Probab=99.42 E-value=1.8e-13 Score=114.95 Aligned_cols=112 Identities=13% Similarity=0.184 Sum_probs=79.0
Q ss_pred EEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeee
Q 012386 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTF 176 (465)
Q Consensus 97 ~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tf 176 (465)
|+|||+|||++|+++++++|+ ++.+. .+|+. ..+++++.|.+ ++++. +...+|+++
T Consensus 2 ~~giDiGgT~i~~~l~d~~g~---i~~~~----~~~t~----~~~~~~~~i~~----~~~~~---------~~~~igi~~ 57 (118)
T d1xc3a1 2 LGGIEAGGTKFVCAVGREDGT---IIDRI----EFPTK----MPDETIEKVIQ----YFSQF---------SLQAIGIGS 57 (118)
T ss_dssp EEEEEECSSEEEEEEECTTSC---EEEEE----EEECC----CHHHHHHHHHH----HHTTS---------CCSEEEEEE
T ss_pred EEEEEeccCEEEEEEEcCCCC---EEEEE----EecCC----CHHHHHHHHHH----HHhhc---------cceecceeE
Confidence 789999999999999999885 66443 34432 34555555544 33322 256899999
Q ss_pred eccccccc--CCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcccccC
Q 012386 177 SFPVRQTS--IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN 242 (465)
Q Consensus 177 SfPv~q~~--i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~~y~~ 242 (465)
++|++... ...+.+... ...++.|.|+.+.|++.+ ++|| .+.||+++..++|+|.+
T Consensus 58 ~G~v~~~~~~~~~g~v~~~----~~~~w~~~~l~~~l~~~~---~~pv---~i~NDana~algE~~~G 115 (118)
T d1xc3a1 58 FGPVDNDKTSQTYGTITAT----PKAGWRHYPFLQTVKNEM---KIPV---GFSTDVNAAALGEFLFG 115 (118)
T ss_dssp CSSBCCCTTSTTTTSBCCC----SSTTTBTCCHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHS
T ss_pred EeeeecCCCccceeEEEcC----CcccccCcCHHHHHHHHH---CCCE---EEeehHHHHHHHHHhhC
Confidence 99996542 122222111 112345899999999999 9997 99999999999999864
|
| >d2ap1a1 c.55.1.10 (A:118-303) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Putative regulator protein YcfX species: Salmonella typhimurium [TaxId: 90371]
Probab=99.41 E-value=1.6e-13 Score=123.64 Aligned_cols=154 Identities=21% Similarity=0.256 Sum_probs=112.8
Q ss_pred ccCCceEEEEEEccccceeEEccCCCCcccCCC--------CC----------------CCCce-eeeehhccccHHHHH
Q 012386 240 YHNKDAIAAVILGTGTNAAYVERAHAIPKWHGL--------LP----------------KSGEM-IFEKIISGMYLGEIV 294 (465)
Q Consensus 240 y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~--------~~----------------~~g~~-~fEkm~SG~YLGEi~ 294 (465)
|+++++++++++|||++++++.+++.+.+.++. ++ .+|.. |+|.++|+..+.+..
T Consensus 2 ~~~y~~v~~l~~GtGiG~giv~nG~l~~G~~g~AGEiGh~~v~~~~~~~~~~~~~~~~c~cg~~gc~e~~~s~~~~~~~~ 81 (186)
T d2ap1a1 2 FTQYPLVMGLILGTGVGGGLVLNGKPITGQSYITGEFGHMRLPVDALTLMGFDFPLRRCGCGQMGCIENYLSGRGFAWLY 81 (186)
T ss_dssp GGGCSEEEEEEESSSEEEEEEETTEEECCTTSCTTCGGGSBCCHHHHHHHCTTSCCCBCTTSCBSBTHHHHSHHHHHHHH
T ss_pred CCCCCEEEEEEEccCeEEEEEECCEEEeCCCCCCceeEEEEECCCCcccccccccccccccCchhhHHhhhhhhhHHHHh
Confidence 678899999999999999999999988876542 11 11222 899999988763322
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH
Q 012386 295 RRVLCRMAEEANFFGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGA 374 (465)
Q Consensus 295 R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA 374 (465)
.. .. . . .++ ...+++. ++..++.+..++++++
T Consensus 82 ~~---~~---------~--~------~~~-----------------~~~~~~~-----------~~~gd~~a~~i~~~~~ 113 (186)
T d2ap1a1 82 QH---YY---------D--Q------SLQ-----------------APEIIAL-----------WEQGDEQAHAHVERYL 113 (186)
T ss_dssp HH---HH---------C--C------CCC-----------------HHHHHHH-----------HHTTCHHHHHHHHHHH
T ss_pred hh---cc---------c--c------ccc-----------------hhhHHHH-----------HHhccchHHHHHHHHH
Confidence 11 10 0 0 011 1122222 5667888999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHH
Q 012386 375 RLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAAL 451 (465)
Q Consensus 375 ~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl 451 (465)
+++|.+|+++++.++| + .|+++|++... +.|.+.+++.+++.+.+.. ..++|+.+ +|++.+|||+
T Consensus 114 ~~la~~i~nl~~~ldP--------e--~IvlGG~i~~~-~~~~~~l~~~~~~~~~~~~-~~~~I~~s~lg~~a~~~GAA~ 181 (186)
T d2ap1a1 114 DLLAVCLGNILTIVDP--------D--LLVIGGGLSNF-TAITTQLAERLPRHLLPVA-RAPRIERARHGDAGGMRGAAF 181 (186)
T ss_dssp HHHHHHHHHHHHHHCC--------S--EEEEESGGGGS-THHHHSSGGGSGGGSCTTC-CCCEEEECSCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCc--------C--EEEECCchhhh-HHHHHHHHHHHHHHhcCcC-CCCEEEECCCCChHHHHHHHH
Confidence 9999999999999999 4 67899999865 5577888888887765543 35677766 9999999998
Q ss_pred HH
Q 012386 452 LA 453 (465)
Q Consensus 452 ~A 453 (465)
+|
T Consensus 182 la 183 (186)
T d2ap1a1 182 LH 183 (186)
T ss_dssp TT
T ss_pred Hh
Confidence 76
|
| >d1z6ra3 c.55.1.10 (A:211-406) Mlc protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Mlc protein species: Escherichia coli [TaxId: 562]
Probab=99.39 E-value=8.5e-13 Score=120.18 Aligned_cols=161 Identities=15% Similarity=0.147 Sum_probs=117.7
Q ss_pred CceEEEEEEccccceeEEccCCCCcccCC---C-----CCCC------Cce-eeeehhccccHHHHHHHHHHHHhhcccC
Q 012386 243 KDAIAAVILGTGTNAAYVERAHAIPKWHG---L-----LPKS------GEM-IFEKIISGMYLGEIVRRVLCRMAEEANF 307 (465)
Q Consensus 243 ~~~~iglIlGTG~Na~yie~~~~i~k~~~---~-----~~~~------g~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~l 307 (465)
.++++.+.+|||++++++.+++.+.+.++ + +++. |.. |+|.++|+..|-+..+. ....
T Consensus 2 ~~n~~~i~ig~GiG~gii~ng~l~~G~~g~aGEiGh~~v~~~g~~c~cG~~gcle~~~s~~al~~~~~~---~~~~---- 74 (196)
T d1z6ra3 2 ARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILELAQL---RLNQ---- 74 (196)
T ss_dssp CSSEEEEEESSSEEEEEEETTEETTTTSSCCBCGGGSBSCTTSCBCTTSCBSBTHHHHSHHHHHHHHHH---HHTT----
T ss_pred CceEEEEEECCCeEEEEEECCEEEECCCCCCccccccccccccccccccccchHHHhcCHHHHHHHHHH---hhcc----
Confidence 46789999999999999999998887664 2 1222 333 99999999999554432 2111
Q ss_pred CCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012386 308 FGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387 (465)
Q Consensus 308 f~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~ 387 (465)
...+.+. +...+ ..++++. ++..++.+..+++++++++|.+|+++++.
T Consensus 75 ---~~~~~l~---------------~~~~~---~~~~~~~-----------~~~gd~~a~~i~~~~~~~la~~i~~l~~~ 122 (196)
T d1z6ra3 75 ---SMSSMLH---------------GQPLT---VDSLCQA-----------ALRGDLLAKDIITGVGAHVGRILAIMVNL 122 (196)
T ss_dssp ---CTTCGGG---------------SSCCC---HHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---ccchhcc---------------CCcCC---HHHHHHH-----------HHccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011110 00011 2233333 67788999999999999999999999999
Q ss_pred hCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHHH
Q 012386 388 LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALL 452 (465)
Q Consensus 388 ~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~ 452 (465)
++| + .|+++|++.+..|.|.+.+++.+++.+.+.....+.|+.+ +|++.+|||++
T Consensus 123 ldP--------~--~IvigG~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~~s~l~~~a~~~GAAll 180 (196)
T d1z6ra3 123 FNP--------Q--KILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALV 180 (196)
T ss_dssp HCC--------S--EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHH
T ss_pred hCC--------C--EEEEecchhhhhHHHHHHHHHHHHHhcccccCCCcEEEECCCCChHHHHHHHHH
Confidence 999 4 6889999999999999999999988765433345667665 89999999875
|
| >d2gupa2 c.55.1.10 (A:115-289) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Hypothetical protein SP2142 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.38 E-value=1.7e-12 Score=116.07 Aligned_cols=154 Identities=22% Similarity=0.254 Sum_probs=110.9
Q ss_pred ceEEEEEEccccceeEEccCCCCcccCCC--------CCCCCc--eeeeehhccccHHHHHHHHHHHHhhcccCCCCCCC
Q 012386 244 DAIAAVILGTGTNAAYVERAHAIPKWHGL--------LPKSGE--MIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVP 313 (465)
Q Consensus 244 ~~~iglIlGTG~Na~yie~~~~i~k~~~~--------~~~~g~--~~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~ 313 (465)
++.+.+++|||++++++.+++.+++.++. ++.++. -|+|.++|+..| .|.+.... . .
T Consensus 2 ~n~~~vtlGtGiG~giv~ng~l~~G~~g~AGEiGh~~v~~~~~~~~~~e~~~s~~~l---~~~~~~~~---------~-~ 68 (175)
T d2gupa2 2 ENAACVVIGTGIGGAMIINGRLHRGRHGLGGEFGYMTTLAPAEKLNNWSQLASTGNM---VRYVIEKS---------G-H 68 (175)
T ss_dssp SSEEEEEESSSEEEEEEETTEEECCTTSCTTCGGGCBSSCCSSSCCBHHHHHSHHHH---HHHHHHHH---------S-S
T ss_pred ccEEEEEEecceeEEEEECCEEEECCCCCcceeeeeeecccccccccchhhccchHH---HHHHHhhc---------c-c
Confidence 57899999999999999999988876652 122222 299999999887 44443321 0 0
Q ss_pred CCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Q 012386 314 PKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTV 393 (465)
Q Consensus 314 ~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~ 393 (465)
+ .++ .+++++. ++..++.+..+++++++.+|.+|++++..++|
T Consensus 69 ~------~~~-----------------~~~l~~~-----------~~~gd~~a~~~~~~~~~~la~~i~~~i~~ldp--- 111 (175)
T d2gupa2 69 T------DWD-----------------GRKIYQE-----------AAAGNILCQEAIERMNRNLAQGLLNIQYLIDP--- 111 (175)
T ss_dssp C------CCC-----------------HHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred c------chh-----------------hHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 0 011 1223332 56677889999999999999999999999999
Q ss_pred CCCCCceEEEEEecceeccchhHHHHHHHHHHHHhcc--CCCccEEEEEe---CChhHHHHHHHHHH
Q 012386 394 RDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGE--EVSETVVIEHS---NDGSGIGAALLAAS 455 (465)
Q Consensus 394 ~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~--~~~~~v~l~~a---~Dgs~iGAAl~Aa~ 455 (465)
+ .|+++|++.+ .+.|.+.+++.+++++.. .......|+.+ +|++++|||.++.-
T Consensus 112 -----~--~IvlGG~i~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~s~~~~~a~l~GAa~l~l~ 170 (175)
T d2gupa2 112 -----G--VISLGGSISQ-NPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 170 (175)
T ss_dssp -----S--EEEEESGGGG-CHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred -----c--eEEECCcccc-hHHHHHHHHHHHHHHHhhccccCCCCEEEECCCCCcHHHHHHHHHHHH
Confidence 4 6889999876 577889999998876432 22223446665 79999999988744
|
| >d2hoea2 c.55.1.10 (A:200-368) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: N-acetylglucosamine kinase species: Thermotoga maritima [TaxId: 2336]
Probab=99.29 E-value=1.3e-11 Score=109.66 Aligned_cols=146 Identities=18% Similarity=0.170 Sum_probs=111.5
Q ss_pred CceEEEEEEccccceeEEccCCCCcccCCC---C-----CCCCce-eeeehhccccHHHHHHHHHHHHhhcccCCCCCCC
Q 012386 243 KDAIAAVILGTGTNAAYVERAHAIPKWHGL---L-----PKSGEM-IFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVP 313 (465)
Q Consensus 243 ~~~~iglIlGTG~Na~yie~~~~i~k~~~~---~-----~~~g~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~lf~~~~~ 313 (465)
.++.+.+.+|||++++++.+++.+.+.++. + ++++.. |+|..+|+.++.+ .+... . .
T Consensus 1 ~~~~~~i~~g~GiG~gii~~g~l~~G~~g~aGEiGh~~v~~~~~~~c~~~~~s~~~l~~---~~~~~----------~-~ 66 (169)
T d2hoea2 1 DDSFAWILTGKGIGAGIIIDGELYRGENGYAGEIGYTRVFNGNEYVFLEDVCNENVVLK---HVLSM----------G-F 66 (169)
T ss_dssp CSCEEEEEESSSCEEEEEETTEECCCSSSCCCCGGGCEEECSSSEEEHHHHHCHHHHHH---HHHHH----------C-C
T ss_pred CCeEEEEEECCceEEEEEECCEEEeCCCCCCcccccccccCCCCcccccccchHHHHHh---hhccc----------c-h
Confidence 368899999999999999999988876652 1 223333 9999999988843 32211 0 0
Q ss_pred CCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Q 012386 314 PKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTV 393 (465)
Q Consensus 314 ~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~ 393 (465)
+ .+ + +.++..+..++.+++++++.+|.+|+++++.++|
T Consensus 67 ~-----------~l-----------------~-----------~~~~~gd~~a~~~~~~~~~~la~~l~n~~~~~dP--- 104 (169)
T d2hoea2 67 S-----------SL-----------------A-----------EARDSGDVRVKEYFDDIARYFSIGLLNLIHLFGI--- 104 (169)
T ss_dssp C------------T-----------------T-----------HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred H-----------HH-----------------H-----------HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCC---
Confidence 0 00 0 1145566778889999999999999999999999
Q ss_pred CCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHHHH
Q 012386 394 RDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLA 453 (465)
Q Consensus 394 ~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~A 453 (465)
+ .|+++|++.+..+.|.+.+++.+++...+. ..+.|+.+ +|++.+|||.++
T Consensus 105 -----e--~IvlgG~~~~~~~~~~~~i~~~~~~~~~~~--~~~~i~~s~~~~~a~~~GAa~~~ 158 (169)
T d2hoea2 105 -----S--KIVIGGFFKELGENFLKKIKIEVETHLLYK--HSVDMSFSKVQEPVIAFGAAVHA 158 (169)
T ss_dssp -----C--EEEEEEGGGGGHHHHHHHHHHHHHHHCSSS--CCCEEEECCCCSCHHHHHHHHHH
T ss_pred -----C--EEEEeChHHhchHHHHHHHHHHHHHhcCCC--CCCEEEECCCCCCHHHHHHHHHH
Confidence 4 688999999999999999999999876543 34556665 899999999886
|
| >d2aa4a2 c.55.1.10 (A:120-289) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: N-acetylmannosamine kinase NanK species: Escherichia coli [TaxId: 562]
Probab=99.22 E-value=1.1e-11 Score=110.04 Aligned_cols=148 Identities=20% Similarity=0.166 Sum_probs=106.7
Q ss_pred CceEEEEEEccccceeEEccCCCCcccCCC--------CCC------CCce-eeeehhccccHHHHHHHHHHHHhhcccC
Q 012386 243 KDAIAAVILGTGTNAAYVERAHAIPKWHGL--------LPK------SGEM-IFEKIISGMYLGEIVRRVLCRMAEEANF 307 (465)
Q Consensus 243 ~~~~iglIlGTG~Na~yie~~~~i~k~~~~--------~~~------~g~~-~fEkm~SG~YLGEi~R~~l~~~~~~~~l 307 (465)
-++++.+.+|||++++++.+++.+.+.++. +++ +|.. |+|.++|+..|-+ +. +.
T Consensus 2 ~~n~~~i~~g~GiG~giv~ng~l~~G~~g~aGEiGh~~~~~~~~~~~cg~~gclE~~~s~~al~~---~~-----~~--- 70 (170)
T d2aa4a2 2 ITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIASGRGIAA---AA-----QG--- 70 (170)
T ss_dssp CCCEEEEEESSSEEEEEEETTEEECCTTSCCCCGGGSBSCTTSCBCTTSCBSBHHHHHSHHHHHH---TC-----CG---
T ss_pred CceEEEEEECCCEEEEEEECCEEEECCCCCCCceeeeeecccccccCcCCccchhhhhhcchHHH---HH-----Hh---
Confidence 367899999999999999999888776552 112 2222 9999999988732 11 00
Q ss_pred CCCCCCCCCCCCCccCchhhhhcccCCCcCHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012386 308 FGDTVPPKLKIPFILRTPHMSAMHHDTSPDLRVVGKKLKDILEISNTSLKMRKLVVELCDIVATRGARLSAAGIVGILKK 387 (465)
Q Consensus 308 f~~~~~~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~~~~ia~~V~~RaA~l~aagiaaii~~ 387 (465)
. + ... + ..++++. ++..++.+..+++++++.+|.+|++++..
T Consensus 71 ---~----~---~~~--------------~---~~~l~~~-----------~~~gd~~a~~i~~~~~~~la~~l~~l~~~ 112 (170)
T d2aa4a2 71 ---E----L---AGA--------------D---AKTIFTR-----------AGQGDEQAQQLIHRSARTLARLIADIKAT 112 (170)
T ss_dssp ---G----G---TTC--------------C---HHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---h----c---cCC--------------C---HHHHHHH-----------HHcCCchhHHHHHHHHHHHHHHHHhhhhe
Confidence 0 0 001 1 1223332 56677889999999999999999999999
Q ss_pred hCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHHHHHHHH
Q 012386 388 LGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGIGAALLA 453 (465)
Q Consensus 388 ~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~iGAAl~A 453 (465)
++| + .|+++|++.. .+.|.+.+++.+..... ...++|..+ +|++.+|||++|
T Consensus 113 ldP--------~--~IvlgG~i~~-~~~~~~~i~~~~~~~~~---~~~~~I~~s~l~~~a~~~GAA~lA 167 (170)
T d2aa4a2 113 TDC--------Q--CVVVGGSVGL-AEGYLALVETYLAQEPA---AFHVDLLAAHYRHDAGLLGAALLA 167 (170)
T ss_dssp HCC--------S--EEEEEHHHHT-STTHHHHHHHHHTTSCG---GGCCEEEECSCSSCHHHHHHHHHH
T ss_pred ECC--------C--EEEEeChhhh-hhhHHHHHHHHHHhccC---CCCCeEEecCCCCcHHHHHHHHHH
Confidence 999 4 6778999854 66788888887765422 234667776 899999999998
|
| >d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Fumble-like domain: Type II pantothenate kinase, CoaW species: Staphylococcus aureus [TaxId: 1280]
Probab=99.16 E-value=7.6e-11 Score=110.05 Aligned_cols=74 Identities=11% Similarity=0.032 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe-
Q 012386 363 VELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS- 441 (465)
Q Consensus 363 ~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a- 441 (465)
+.++..+++..+++++..+..+.+.++| + .|++.||+....|.+++.+++++++. .+++.+.
T Consensus 190 ~~~a~~~~~~~~~~l~~~~~~~~~~~~~--------~--~Iv~~GG~~~~~~~l~~~i~~~~~~~-------~~~i~~~~ 252 (267)
T d2ewsa1 190 SNKLAAVIGVVGEVVTTMAITVAREFKT--------E--NIVYIGSSFHNNALLRKVVEDYTVLR-------GCKPYYVE 252 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC--------C--EEEEESGGGTTCHHHHHHHHHHHHHT-------TCEEEECT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhcCC--------C--CEEEECChhhcCHHHHHHHHHHHHhC-------CCEEEECC
Confidence 4555667788888999999999999988 4 57788888889999999999988753 2344444
Q ss_pred --CChhHHHHHHHH
Q 012386 442 --NDGSGIGAALLA 453 (465)
Q Consensus 442 --~Dgs~iGAAl~A 453 (465)
++++.+|||+++
T Consensus 253 ~~~~aGaiGA~~L~ 266 (267)
T d2ewsa1 253 NGAFSGAIGALYLE 266 (267)
T ss_dssp TGGGHHHHHHHHTC
T ss_pred CccHHHHHHHHHhc
Confidence 668899998764
|
| >d1q18a1 c.55.1.7 (A:2-111) Glucokinase Glk {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Glucokinase domain: Glucokinase Glk species: Escherichia coli [TaxId: 562]
Probab=99.07 E-value=3.5e-10 Score=93.16 Aligned_cols=105 Identities=16% Similarity=0.246 Sum_probs=69.1
Q ss_pred eeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeee
Q 012386 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (465)
Q Consensus 95 G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~ 174 (465)
-++|++|+||||+|+++|+.++. .+... +.++.+. .+. +.+.|.+|+++.+. +...+++
T Consensus 2 ~~~L~~DIGGTn~r~alv~~~~~---~l~~~-~~~~~~~------~~~----~~~~i~~~~~~~~~-------~~~~~~i 60 (110)
T d1q18a1 2 KYALVGDVGGTNARLALCDIASG---EISQA-KTYSGLD------YPS----LEAVIRVYLEEHKV-------EVKDGCI 60 (110)
T ss_dssp CEEEEEEECSSEEEEEEEETTTC---CEEEE-EEEEGGG------CSC----HHHHHHHHHHHHTC-------CCSEEEE
T ss_pred cEEEEEEECchhEEEEEEEcCCC---eEEEE-Eeecccc------hhh----HHHHHHHHHhhccc-------ccceEEE
Confidence 47899999999999999997664 33222 2233221 112 33445666666543 3567899
Q ss_pred eeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCC-eeEEEEEechHHHhhcc
Q 012386 175 TFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLD-MRVAALVNDTIGTLAGG 238 (465)
Q Consensus 175 tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~-v~v~alvNDtvatlla~ 238 (465)
++++|++.....- +..+|+ +..+.|++.| ++| | .|+||.+|..++-
T Consensus 61 ~~ag~~~~~~~~~-~n~~w~-----------~~~~~l~~~~---~~~~v---~v~NDa~AaA~gi 107 (110)
T d1q18a1 61 AIACPITGDWVAM-TNHTWA-----------FSIAEMKKNL---GFSHL---EIINDFTAVSMAI 107 (110)
T ss_dssp EESSCCCSSEECC-SSGGGC-----------EEHHHHHHHT---TCSEE---EEEEHHHHHHHHG
T ss_pred cccccccCcEEee-cccCCc-----------cCHHHHHHHh---CCCcE---EEEehHHHHhccc
Confidence 9999997654322 223564 3457778877 875 5 8999999998874
|
| >d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: Hydroxyglutaryl-CoA dehydratase component A species: Acidaminococcus fermentans [TaxId: 905]
Probab=99.02 E-value=2.7e-09 Score=99.22 Aligned_cols=73 Identities=15% Similarity=0.110 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEE-EEeCC
Q 012386 365 LCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVI-EHSND 443 (465)
Q Consensus 365 ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l-~~a~D 443 (465)
.++.+..+...+++..+..+.+..+| + .|+++||++. .+.|++.+++.++ .++.. .+.++
T Consensus 183 ~~~i~~~~~~~~~~~~~~~~~~~~~~--------~--~Iv~gGGv~~-~~~~~~~l~~~l~--------~~i~~~~~~~~ 243 (259)
T d1huxa_ 183 KIDIIAGIHRSVASRVIGLANRVGIV--------K--DVVMTGGVAQ-NYGVRGALEEGLG--------VEIKTSPLAQY 243 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCC--------S--SEEEESGGGG-CHHHHHHHHHHHC--------SCEECCGGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC--------C--cEEEEccccc-cHHHHHHHHHHHC--------CCEEcCCCccH
Confidence 33444444445555555555444455 3 3778999985 6888888877762 12211 33588
Q ss_pred hhHHHHHHHHHHh
Q 012386 444 GSGIGAALLAASH 456 (465)
Q Consensus 444 gs~iGAAl~Aa~~ 456 (465)
++.+|||++|+-.
T Consensus 244 agaiGAA~lA~~~ 256 (259)
T d1huxa_ 244 NGALGAALYAYKK 256 (259)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998643
|
| >d1woqa2 c.55.1.10 (A:140-263) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Inorganic polyphosphate/ATP-glucomannokinase PPGMK species: Arthrobacter sp. KM [TaxId: 184230]
Probab=98.89 E-value=6.1e-10 Score=94.08 Aligned_cols=63 Identities=14% Similarity=0.146 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEe---CChhHH
Q 012386 371 TRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHS---NDGSGI 447 (465)
Q Consensus 371 ~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a---~Dgs~i 447 (465)
+++++.+|.+|++++..++| + .|+++||+.+..+.|.+.++ .+++|.++ +|++++
T Consensus 57 ~~~~~~la~~l~~~~~~~dP--------e--~IVlGGgi~~~~~~~~~~l~------------~~~~i~~a~l~~~Agli 114 (124)
T d1woqa2 57 DEYSVLLQRYFSHVEFLFSP--------E--LFIVGGGISKRADEYLPNLR------------LRTPIVPAVLRNEAGIV 114 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--------S--EEEEESGGGGGGGGTGGGCC------------CSSCEEECSCSTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCC--------C--EEEEcchHhhChHHHhhhhh------------ccCeEEecCcCCcHHHH
Confidence 45778899999999999999 5 79999999999888765443 24456666 899999
Q ss_pred HHHHHHHH
Q 012386 448 GAALLAAS 455 (465)
Q Consensus 448 GAAl~Aa~ 455 (465)
|||+.|+-
T Consensus 115 GAAl~a~~ 122 (124)
T d1woqa2 115 GAAIEIAL 122 (124)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998754
|
| >d1xc3a2 c.55.1.10 (A:119-294) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Putative fructokinase YhdR species: Bacillus subtilis [TaxId: 1423]
Probab=98.89 E-value=3.1e-09 Score=94.51 Aligned_cols=76 Identities=17% Similarity=0.166 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccC-------CCccEEEEE
Q 012386 368 IVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEE-------VSETVVIEH 440 (465)
Q Consensus 368 ~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~-------~~~~v~l~~ 440 (465)
.+++++++.+|.+|+++++.++| + .|+++||+.+..+ +.+.+.+.+++++... ....+.|..
T Consensus 82 ~i~~~~~~~la~~i~~~~~~~dP--------~--~IviGGgi~~~~~-l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~ 150 (176)
T d1xc3a2 82 QVWELEGYYIAQALAQYILILAP--------K--KIILGGGVMQQKQ-VFSYIYQYVPKIMNSYLDFSELSDDISDYIVP 150 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCC--------S--CEEEESGGGGSTH-HHHHHHHHHHHHHTTSSCCGGGTTTGGGTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC--------C--EEEEcChhhccHh-HHHHHHHHHHHHHHHhhccccccccCCCeEEe
Confidence 46788999999999999999999 4 6889999987655 5577777777664321 112344666
Q ss_pred e---CChhHHHHHHHHH
Q 012386 441 S---NDGSGIGAALLAA 454 (465)
Q Consensus 441 a---~Dgs~iGAAl~Aa 454 (465)
+ +|++.+|||++|.
T Consensus 151 s~lg~~a~l~GAa~la~ 167 (176)
T d1xc3a2 151 PRLGSNAGIIGTLVLAH 167 (176)
T ss_dssp CTTGGGHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHH
Confidence 5 7999999999874
|
| >d2ch5a1 c.55.1.5 (A:118-344) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: N-acetylglucosamine kinase, NAGK species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.88 E-value=2.5e-08 Score=92.56 Aligned_cols=99 Identities=13% Similarity=0.124 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccC---CC
Q 012386 357 KMRKLVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEE---VS 433 (465)
Q Consensus 357 ~d~~~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~---~~ 433 (465)
+.++.+|++|..|++++++.++..+++++++++|... ...+.+.|++.||++++.+.|++.++++|.+..... ..
T Consensus 105 ~aA~~GD~~A~~Il~~aa~~La~~i~~~~~~l~~~~~--~~~~~~~Vvl~Ggv~~~~~~l~~~~~~~L~~~~~~~~~~~~ 182 (227)
T d2ch5a1 105 EGAQQGDPLSRYIFRKAGEMLGRHIVAVLPEIDPVLF--QGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFF 182 (227)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHGGGSCGGGG--CSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSC
T ss_pred hhhhcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhh--ccccCCCeEEechHhhcchHHHHHHHHHHHHhcchhhcccC
Confidence 3478899999999999999999999999999987321 122456799999999999999999999998764332 12
Q ss_pred ccEEEEEeCChhHHHHHHHHHHhc
Q 012386 434 ETVVIEHSNDGSGIGAALLAASHS 457 (465)
Q Consensus 434 ~~v~l~~a~Dgs~iGAAl~Aa~~~ 457 (465)
..+++...++.+.+|||++|+-..
T Consensus 183 ~~~~~~~~~~~p~~GAa~LA~~~~ 206 (227)
T d2ch5a1 183 SSFTLMKLRHSSALGGASLGARHI 206 (227)
T ss_dssp SEEEEEEESSCTHHHHHHHHHHTT
T ss_pred CeeEeecCCCccHHHHHHHHHHHc
Confidence 457777889999999999997544
|
| >d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: Probable N-acetylglucosamine kinase CV2896 species: Chromobacterium violaceum [TaxId: 536]
Probab=98.78 E-value=3.2e-08 Score=81.52 Aligned_cols=106 Identities=17% Similarity=0.169 Sum_probs=70.5
Q ss_pred eeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcc--ee
Q 012386 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR--EL 172 (465)
Q Consensus 95 G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~--~l 172 (465)
.+|||||.|||+.|+++++.+|+ ++.+. ..-|... ....++.++.|.+.+.+.+++.+... .+.. .+
T Consensus 4 ~y~lGID~GGT~tk~~l~d~~G~---il~~~---~~~~~~~-~~~~~~~~~~i~~~i~~~~~~ag~~~----~~~~~~~~ 72 (114)
T d1zc6a1 4 RYLIGVDGGGTGTRIRLHASDGT---PLAMA---EGGASAL-SQGIAKSWQAVLSTLEAAFQQAGLPA----APASACAI 72 (114)
T ss_dssp CEEEEEEECSSCEEEEEEETTCC---EEEEE---EESCCCG-GGCHHHHHHHHHHHHHHHHHHTTCCC----CCGGGEEE
T ss_pred cEEEEEEcCcceEEEEEEcCCCC---EEEEE---EccCCCc-ccCHHHHHHHHHHHHHHHHHHcCCCh----hhhceeEE
Confidence 48999999999999999999885 66443 1223333 34678999999999999998766432 2222 23
Q ss_pred eeeeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcc
Q 012386 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGG 238 (465)
Q Consensus 173 G~tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~ 238 (465)
+++.++ | ...+..+.|.+.+ .+..-+.|.||+++++++.
T Consensus 73 ~~g~aG--------------~---------~~~~~~~~l~~~~----~~~~~v~v~nDa~~A~~ga 111 (114)
T d1zc6a1 73 GLGLSG--------------V---------HNRQWAGEFESQA----PGFARLSLATDGYTTLLGA 111 (114)
T ss_dssp EEEESC--------------C---------CTTSHHHHHHHTC----CCCSEEEEECHHHHHHHHH
T ss_pred EEEecC--------------C---------CcHHHHHHHHHhC----CCCCeEEEECHHHHHHHHh
Confidence 333322 2 2345555554433 3333458999999999983
|
| >d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: N-acetylglucosamine kinase, NAGK species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.29 E-value=3.2e-06 Score=69.80 Aligned_cols=111 Identities=19% Similarity=0.213 Sum_probs=74.2
Q ss_pred eeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeee
Q 012386 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (465)
Q Consensus 95 G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~ 174 (465)
..|+|||-|||+.|+.+++.+|+ ++.+. ..-|.+....+.++..+.|.+.|.+.++..+... ..+...+++
T Consensus 3 ~~~~GIDgGGTkT~~~l~d~~G~---~l~~~---~~g~~N~~~~~~~~~~~~i~~~i~~~l~~~~~~~---~~~i~~i~~ 73 (117)
T d2ch5a2 3 AIYGGVEGGGTRSEVLLVSEDGK---ILAEA---DGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDP---LVPLRSLGL 73 (117)
T ss_dssp CEEEEEEECTTCEEEEEEETTSC---EEEEE---EECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCT---TCCBSEEEE
T ss_pred cEEEEEEcChhhEEEEEECCCCC---EEEEE---EcCCCCcchhhHHHHHHHHHHHHHHHHHHhcCCC---CccccEEEE
Confidence 37999999999999999999885 66433 1224333334677788888888888887765421 123556666
Q ss_pred eeecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHc--CCCeeEEEEEechHHHhhcc
Q 012386 175 TFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI--GLDMRVAALVNDTIGTLAGG 238 (465)
Q Consensus 175 tfSfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~--gl~v~v~alvNDtvatlla~ 238 (465)
+.++ +++ .+-.+.|+++|.++ ++.. -+.|.||+++++.+.
T Consensus 74 GlAG-~~~----------------------~~~~~~l~~~l~~~~~~~~~-~v~v~nDa~~Al~~a 115 (117)
T d2ch5a2 74 SLSG-GDQ----------------------EDAGRILIEELRDRFPYLSE-SYLITTDAAGSIATA 115 (117)
T ss_dssp EETT-TTC----------------------HHHHHHHHHHHHHHCTTSBS-CEEEEEHHHHHHHHH
T ss_pred Eeec-cCc----------------------chhHHHHHHHHHHHCCCCCc-eEEEeccHHHHHhhc
Confidence 6665 332 33456677777654 3321 248999999999864
|
| >d1zc6a2 c.55.1.5 (A:122-292) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: Probable N-acetylglucosamine kinase CV2896 species: Chromobacterium violaceum [TaxId: 536]
Probab=97.38 E-value=5.8e-05 Score=66.20 Aligned_cols=69 Identities=20% Similarity=0.186 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEE
Q 012386 361 LVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEH 440 (465)
Q Consensus 361 ~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~ 440 (465)
..+.+|..|+++++..++..+.++ .+. +...|++.||+++++..+ +.+.++..+ +.
T Consensus 102 ~gD~~A~~Il~~a~~~l~~~~~~~----~~~-------~~~~v~l~Ggl~~~~~~~---l~~~~~~~l----------~~ 157 (171)
T d1zc6a2 102 RVDPEADALLRQAGEDAWAIARAL----DPQ-------DELPVALCGGLGQALRDW---LPPGFRQRL----------VA 157 (171)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHH----CTT-------CCSCEEEESHHHHHTGGG---SCHHHHHHC----------CC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHh----ccc-------CCceEEEECchHHHHHHH---HHHHHHhhh----------cC
Confidence 478999999999999988766543 221 122478899998765322 223333222 22
Q ss_pred eCChhHHHHHHHH
Q 012386 441 SNDGSGIGAALLA 453 (465)
Q Consensus 441 a~Dgs~iGAAl~A 453 (465)
.......||.++|
T Consensus 158 ~~~~p~~GA~~lA 170 (171)
T d1zc6a2 158 PQGDSAQGALLLL 170 (171)
T ss_dssp CSSCHHHHHHHHT
T ss_pred CCCCHHHHHHHHh
Confidence 3456788998876
|
| >d1r59o1 c.55.1.4 (O:5-256) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Glycerol kinase domain: Glycerol kinase species: Enterococcus casseliflavus [TaxId: 37734]
Probab=95.97 E-value=0.0004 Score=64.02 Aligned_cols=74 Identities=19% Similarity=0.333 Sum_probs=48.7
Q ss_pred eeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeec--CCC-cccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcce
Q 012386 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (465)
Q Consensus 95 G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~ 171 (465)
.||||||+|.|++|+++++.+|+ ++.+.+..++. |+. ....+++++++.+.+++++.+...... ..++..
T Consensus 1 nyvlgiDiGTtsvKa~l~D~~g~---~~~~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~~~~~~~~~~~~----~~~i~a 73 (252)
T d1r59o1 1 NYVMAIDQGTTSSRAIIFDRNGK---KIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIR----PEAIAG 73 (252)
T ss_dssp CEEEEEBCCSSBCBCCEECSSSC---BCCCCCCBCCCCCCSTTCCBCCGGGSSSTTTTTSHHHHTTTTCC----TTSEEE
T ss_pred CEEEEEEecccceeeeEEeCCCC---EEEEEEEeCCceecCCCcEEECHHHHHHHHHHHHHHHhhhhhhc----ccccce
Confidence 37899999999999999998774 55433323321 211 222458889998999999887665432 134555
Q ss_pred eeee
Q 012386 172 LGFT 175 (465)
Q Consensus 172 lG~t 175 (465)
||+|
T Consensus 74 I~is 77 (252)
T d1r59o1 74 IGIT 77 (252)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 6555
|
| >d1zxoa2 c.55.1.5 (A:107-280) Hypothetical protein BT3618 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: Hypothetical protein BT3618 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=95.82 E-value=0.00047 Score=60.34 Aligned_cols=44 Identities=32% Similarity=0.506 Sum_probs=30.7
Q ss_pred EEEEEccccceeEEccCC---CCcccCCCCCCCCceeeeehhccccHHHHHHHHHHHH
Q 012386 247 AAVILGTGTNAAYVERAH---AIPKWHGLLPKSGEMIFEKIISGMYLGEIVRRVLCRM 301 (465)
Q Consensus 247 iglIlGTG~Na~yie~~~---~i~k~~~~~~~~g~~~fEkm~SG~YLGEi~R~~l~~~ 301 (465)
|-+|+|||+|+|++.... .+++|...+...| ||.|+| |.++...
T Consensus 4 iv~I~GTGS~~~~~~~~g~~~r~gG~G~~lGDeG--------Sg~~iG---~~al~~~ 50 (174)
T d1zxoa2 4 IACILGTGSNSCFYNGKEIVSNISPLGFILGDEG--------SGAVLG---KLLVGDI 50 (174)
T ss_dssp EEEEESSSEEEEEECSSSEEEECCCCCTTTSCCS--------SHHHHH---HHHHHHG
T ss_pred EEEEecCchheeEECCCCcEEEeCCCCccCCCCc--------hHHHHH---HHHHHHH
Confidence 678999999999996543 3567766554444 888885 4555544
|
| >d1zbsa1 c.55.1.5 (A:108-283) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: Hypothetical protein PG1100 species: Porphyromonas gingivalis [TaxId: 837]
Probab=95.72 E-value=0.0037 Score=54.35 Aligned_cols=69 Identities=10% Similarity=0.046 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCceEEEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEE
Q 012386 361 LVVELCDIVATRGARLSAAGIVGILKKLGRDTVRDGEKQKSVIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEH 440 (465)
Q Consensus 361 ~~~~ia~~V~~RaA~l~aagiaaii~~~~~~~~~~~~~~~~~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~ 440 (465)
..+.+|..|+++++..+...+. ..... ...-|++.||+.. .|.+.+++.+++. .+++..
T Consensus 100 ~~d~~a~~Ii~~aa~el~~~~~---~~~~~--------~~~pv~l~Ggv~~---~~~~~l~~~l~~~-------~i~i~~ 158 (176)
T d1zbsa1 100 LDIPAVYSLVQNSFDDFLVRNV---LRYNR--------PDLPLHFIGSVAF---HYREVLSSVIKKR-------GLTLGS 158 (176)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHT---GGGCC--------TTSCEEEESHHHH---HTHHHHHHHHHHT-------TCCEEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHH---Hhccc--------CCCeEEEECcHHH---HHHHHHHHHHHHc-------CCEecc
Confidence 4678899999999988754332 22222 1224889999964 5666666666653 234433
Q ss_pred eCChhHHHHH
Q 012386 441 SNDGSGIGAA 450 (465)
Q Consensus 441 a~Dgs~iGAA 450 (465)
...-.+-||-
T Consensus 159 i~~~Pi~Gav 168 (176)
T d1zbsa1 159 VLQSPMEGLI 168 (176)
T ss_dssp EESCSHHHHH
T ss_pred ccCCHhHHHH
Confidence 3333566753
|
| >d1zbsa2 c.55.1.5 (A:1-107) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: Hypothetical protein PG1100 species: Porphyromonas gingivalis [TaxId: 837]
Probab=94.24 E-value=0.19 Score=39.32 Aligned_cols=104 Identities=11% Similarity=0.054 Sum_probs=54.5
Q ss_pred EEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCCcchHHHHHHHHHHHHHHhhCCCCCCCCCCcceeeeee
Q 012386 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTF 176 (465)
Q Consensus 97 ~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~I~~fl~~~~~~~~~~~~~~~~lG~tf 176 (465)
.|++|=|||..+..+++ +|+ ++.+. ..-|.+....+.+++.+.|.+.+.+-+.... .+...+-|..
T Consensus 2 ilivDgGgTKT~~vl~d-~g~---~i~~~---~t~g~Np~~~~~~~~~~~l~~~~~~~l~~~~-------~~i~~i~~g~ 67 (107)
T d1zbsa2 2 ILIGDSGSTKTDWCIAK-EGK---SLGRF---QTSGINPFQQDRNEIDTALRSEVLPAIGQKA-------SSIRAVYFYG 67 (107)
T ss_dssp EEEEEECSSEEEEEEEE-TTE---EEEEE---EEECCCTTTSCHHHHHHHHTTTTHHHHTTST-------TTCCEEEEEE
T ss_pred EEEEEeccccEEEEEEC-CCC---eEEEE---ecCCcCcccCCHHHHHHHHHHHHHHHHhccc-------cCCcEEEEEe
Confidence 58999999999987776 553 44332 2234333334566666666543332221111 2233344443
Q ss_pred ecccccccCCceEEeccCCccccCCCCCCcHHHHHHHHHHHcCCCeeEEEEEechHHHhhcc
Q 012386 177 SFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGG 238 (465)
Q Consensus 177 SfPv~q~~i~~g~Li~wtKgF~~~~~~g~dv~~~L~~al~~~gl~v~v~alvNDtvatlla~ 238 (465)
++ ++ -.+ .+.+.+.+.+.-.+..-+.|.||+.+++++.
T Consensus 68 AG-~~----------------------~~~-~~~i~~~l~~~~~~~~~i~V~~D~~aA~~a~ 105 (107)
T d1zbsa2 68 AG-CT----------------------PAK-APMLNEALDSMLPHCDRIEVAGDMLGAARAL 105 (107)
T ss_dssp TT-CC----------------------TTT-HHHHHHHHHHHSTTCSEEEEECHHHHHHHHH
T ss_pred cC-CC----------------------chh-hHHHHHHHHHHCCCCCEEEECChHHHHHHHh
Confidence 33 11 112 2334444544322233468999999988764
|
| >d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Actin/HSP70 domain: Heat shock protein 70kDa, ATPase fragment species: Cow (Bos taurus) [TaxId: 9913]
Probab=92.26 E-value=0.14 Score=43.82 Aligned_cols=29 Identities=14% Similarity=0.169 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHcCCCeeEEEEEechHHHhhc
Q 012386 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAG 237 (465)
Q Consensus 207 v~~~L~~al~~~gl~v~v~alvNDtvatlla 237 (465)
=.+.+.+|.+.-|+++ +.++|+.+|++++
T Consensus 151 qr~~~~~Aa~~AGl~~--~~li~EP~AAAl~ 179 (185)
T d1bupa1 151 QRQATKDAGTIAGLNV--LRIINEPTAAAIA 179 (185)
T ss_dssp HHHHHHHHHHHTTCEE--EEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCe--EEEEcCHHHHHHH
Confidence 4577788887778874 7999999999986
|
| >d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Glycerol kinase domain: Glycerol kinase species: Enterococcus casseliflavus [TaxId: 37734]
Probab=88.56 E-value=0.98 Score=40.08 Aligned_cols=47 Identities=19% Similarity=0.248 Sum_probs=35.9
Q ss_pred EEEEecceeccchhHHHHHHHHHHHHhccCCCccEEEEEeCChhHHHHHHHHHHhc
Q 012386 402 VIALDGGLFEHYTKFSACMQSTVKELLGEEVSETVVIEHSNDGSGIGAALLAASHS 457 (465)
Q Consensus 402 ~V~idGsv~~~~~~f~~~l~~~l~~~~~~~~~~~v~l~~a~Dgs~iGAAl~Aa~~~ 457 (465)
.|.++||. .+.+.+.+.+-+.+ + ..|.+....+++.+|||++|+.+.
T Consensus 150 ~i~~~GG~-s~s~~~~Qi~Advl----g----~~v~~~~~~e~~alGaA~la~~~~ 196 (235)
T d1r59o2 150 LLKVDGGA-AKNDLLMQFQADIL----D----IDVQRAANLETTALGAAYLAGLAV 196 (235)
T ss_dssp EEEEEEST-TSCHHHHHHHHHHH----S----SEEEEESCCCTTTHHHHHHHHHHH
T ss_pred EEEecCcc-hhCHHHHhhhhhcc----c----eeeeeccccchHHHHHHHHHHHHc
Confidence 46778887 46788888877754 2 356666668899999999999876
|
| >d1u6za2 c.55.1.8 (A:12-135) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Ppx/GppA phosphatase domain: Exopolyphosphatase Ppx species: Escherichia coli [TaxId: 562]
Probab=84.86 E-value=1.4 Score=34.97 Aligned_cols=63 Identities=19% Similarity=0.223 Sum_probs=41.1
Q ss_pred eEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCccc-CC-cchHHHHHHHHHHHHHHhh
Q 012386 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMT-GS-SHELFDYIAAALAKFVATE 158 (465)
Q Consensus 96 ~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~-~~-~~~lfd~Ia~~I~~fl~~~ 158 (465)
.|-+||+|-.++|..+.+..++...++........+...+.. +. .++-.+...++|.+|.+..
T Consensus 1 ~~A~IDiGSNsirl~I~~~~~~~~~~l~~~~~~~rLg~~~~~~g~l~~~~i~~~~~~l~~f~~~~ 65 (124)
T d1u6za2 1 EFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERL 65 (124)
T ss_dssp CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEEccceEEEEEEEecCCCeeEeeeeeEEeehhhhccccCCcCHHHHHHHHHHHHHHHHHH
Confidence 478999999999999998866544445443223334444321 11 4466788888888887653
|
| >d1e4ft1 c.55.1.1 (T:7-199) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Actin/HSP70 domain: Cell division protein FtsA species: Thermotoga maritima [TaxId: 2336]
Probab=81.65 E-value=4 Score=34.38 Aligned_cols=63 Identities=13% Similarity=0.165 Sum_probs=37.0
Q ss_pred ceeEEEEEeCCceEEEEEEEecCCcceeEEEEeeeeecCCCcccCC---cchHHHHHHHHHHHHHHhhC
Q 012386 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGS---SHELFDYIAAALAKFVATEG 159 (465)
Q Consensus 94 ~G~~LaiDlGGTNlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~---~~~lfd~Ia~~I~~fl~~~~ 159 (465)
+.+|.|||+|-+++|+++.+...++.+++... ..+ ...++.|. .+.+-+.|.+.|.+.-+..+
T Consensus 1 ~~~~~aiDIGs~kI~~~v~~~~~~~~~iig~~--~~~-s~Gi~~G~I~d~~~~~~~I~~~I~~aE~~a~ 66 (193)
T d1e4ft1 1 TVFYTSIDIGSRYIKGLVLGKRDQEWEALAFS--SVK-SRGLDEGEIKDAIAFKESVNTLLKELEEQLQ 66 (193)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTEEEEEEEE--EEE-CCSEETTEESCHHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEEcCCCEEEEEEEEEcCCcEEEEEEE--EEe-cCCccCCeEEeHHHHHHHHHHHHHHHHHHcC
Confidence 46899999999999999887754434454332 222 23343332 44455555555555544444
|