Citrus Sinensis ID: 012478

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460--
MNPSAARVSRDSSSVCVCLFHSNSRPSSFLGINNNTISFNKTNTNTLLLNTATNPGTINRTRVYRKNSTGVEACLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKGGRIPSPGSMPSFQEIKETLGFNTYYEEEKRYATSMRRLSSENVTSNSYDTQPMAQDDTARRGQSSQDPIVEVITPEVYTNSGAGGSRDAFSGIWSRTLRVKITGRDGFEKLDVRIPAGFLDGITNVVPGIGE
ccccccEEccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccEEccccccccccccHHHHHHHHHHccccEEccccccHHHHHHHHHHcccEEEEccHHHHHHcccccccccccHHHHHHHHHHHHHcccccEEEEcccccccHHHHHHHHHHHHHHccEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccccccHHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHcccccEEEEEcccccccccccHHHHHHccccEEEEcHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHccHHHHHHHHHHHccccccccccccccccccccccccccHHHHcccccccEEEEEcHHHHccccccccccccccEEEEEEEEEEEcccccEEcccccccccccccccccccccc
ccccHcEEcccccEEEEEEEccccccccEEEEccccccccHHHHHHHHHHHccccccccEEEEcccccccccccccHHHHHHHHHHcccccEEEEEEcHHHHHHHHHccccEEEEccHHHHHHcccccccccccHHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHHHcccEEEEEcEcccccccccccccEccHHHHHHHHHHHHHHcccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHcccEEcHHHHccHHHHHHHHHHcccccEEEEccccccccccccHHHHHHccccEEEEcHHHHHHHHHHHHHHHHHHHcccccHHHHHHcHHHHHHHHcccHHHHHHHHHHHcHcHccccccccEEEEEEcccccccccccccccccEEEEEccHHcccccccccccccccccEEEEEEEEEcccccEEEcEEccccHHHHHHcHcHcccc
mnpsaarvsrdsssVCVClfhsnsrpssflginnntisfnkTNTNTLLlntatnpgtinrtrvyrknstgveaclspaKSLRQIlelpgvhqgpaCFDALSAKLVeksgfsfcftsgfsisaarlalpdtgfisygemvdqgqlitqavsipvigdgdngygnamNVKRTVKGYIKAGFagiiledqvspkgcghtrgrkvvsREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANmlegggktpilnpleleELGFKLVAYPLSLIGVSVRAMQDALTAikggripspgsmpsFQEIKETLGFNTYYEEEKRYATSMRrlssenvtsnsydtqpmaqddtarrgqssqdpivevitpevytnsgaggsrdafsgIWSRTLRVKItgrdgfekldvripagfldgitnvvpgige
mnpsaarvsrdsssVCVCLFHSnsrpssflgiNNNTISFNKTNTNTLLlntatnpgtinrtrvyrKNSTGVEACLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIiledqvspkgcghtrgrkvvsreeaVMRIKAavdarkesgsdivivartdsrqalslEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKggripspgsmpSFQEIKETLGFNTYYEEEKRYATsmrrlssenvtsnsydtqpmaqDDTARRGQSSQDPIVEVITpevytnsgaggsrdafsgiwsrtlrvkitgrdgfekldvripagfldgitnvvpgige
MNPsaarvsrdsssvcvcLFHSNSRPSSFLGINNNTISFnktntntlllntatnPGTINRTRVYRKNSTGVEACLSPAKSLRQILELPGVHQGPACFDALSAKLVEKsgfsfcftsgfsisAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKGGRIPSPGSMPSFQEIKETLGFNTYYEEEKRYATSMRRLSSENVTSNSYDTQPMAQDDTARRGQSSQDPIVEVITPEVYTNSGAGGSRDAFSGIWSRTLRVKITGRDGFEKLDVRIPAGFLDGITNVVPGIGE
**************VCVCLFHSNSRPSSFLGINNNTISFNKTNTNTLLLNTATNPGTINRTRVYRKNSTGVEACLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVV****AVMRIKA***********IVIVA******************AFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKG****************ETLGFNTYY********************************************VEVITPEVYTNSGAGGSRDAFSGIWSRTLRVKITGRDGFEKLDVRIPAGFLDGITNVVP****
***********SSSVCVCLFH*************************************************************QILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAIK**********PSFQEIKETLGFNTYYEEEKRYA*************************************VEVITPEVYTNSGAGGSRDAFSGIWSRTLRVKITGRDGFEKLDVRIPAGFLDGITNVVPGI**
*************SVCVCLFHSNSRPSSFLGINNNTISFNKTNTNTLLLNTATNPGTINRTRVYRKNSTGVEACLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKGGRIPSPGSMPSFQEIKETLGFNTYYEEEKRYATSMRRLSSENVTSNSYDT***************QDPIVEVITPEVYTNSGAGGSRDAFSGIWSRTLRVKITGRDGFEKLDVRIPAGFLDGITNVVPGIGE
*******VSRDSSSVCVCLFHSNSRPSSFLGINNNTISFNKTNTNTLLLNTATNPGTINRTRVYRKNS*****CLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKGGRIPSPGSMPSFQEIKETLGFNTYYEEEKRYATSMRRLSSENVTSNSYDTQPM************QDPIVEVITPEVYTNSGAGGSRDAFSGIWSRTLRVKITGRDGFEKLDVRIPAGFLDGITNVVPGIG*
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MNPSAARVSRDSSSVCVCLFHSNSRPSSFLGINNNTISFNKTNTNTLLLNTATNPGTINRTRVYRKNSTGVEACLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKGGRIPSPGSMPSFQEIKETLGFNTYYEEEKRYATSMRRLSSENVTSNSYDTQPMAQDDTARRGQSSQDPIVEVITPEVYTNSGAGGSRDAFSGIWSRTLRVKITGRDGFEKLDVRIPAGFLDGITNVVPGIGE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query462 2.2.26 [Sep-21-2011]
Q0QLE4289 2,3-dimethylmalate lyase N/A no 0.616 0.986 0.419 2e-58
P11435295 Carboxyvinyl-carboxyphosp yes no 0.612 0.959 0.387 1e-51
O49290339 Carboxyvinyl-carboxyphosp no no 0.597 0.814 0.389 7e-50
Q05957318 Petal death protein OS=Di N/A no 0.597 0.867 0.400 3e-46
Q9YFM7308 Methylisocitrate lyase OS yes no 0.608 0.912 0.368 1e-43
Q9Z9T7300 Methylisocitrate lyase OS yes no 0.608 0.936 0.337 5e-41
P54528301 Methylisocitrate lyase OS yes no 0.608 0.933 0.324 8e-41
Q8NSL2307 Probable methylisocitrate yes no 0.567 0.853 0.360 4e-39
Q8NSH8305 Probable methylisocitrate no no 0.534 0.809 0.370 6e-39
P77541296 Methylisocitrate lyase OS N/A no 0.601 0.939 0.343 1e-36
>sp|Q0QLE4|DML_EUBBA 2,3-dimethylmalate lyase OS=Eubacterium barkeri GN=Dml PE=1 SV=1 Back     alignment and function desciption
 Score =  226 bits (577), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 122/291 (41%), Positives = 177/291 (60%), Gaps = 6/291 (2%)

Query: 75  LSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFIS 134
           ++ A  +R++L    +   P   DA++AK++ + GF   + +G+  SA+ L  PD G ++
Sbjct: 1   MNTAAKMRELLSTKKMVVAPGAHDAMTAKVIGRLGFDAVYMTGYGQSASHLGQPDVGLLT 60

Query: 135 YGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCG 194
             EMV +   I +A  +PVI D D G+GNA+NV RTV+ Y KAG A I LEDQV PK CG
Sbjct: 61  MTEMVARANAIVEAAGVPVIADADTGFGNAVNVMRTVREYEKAGVAVIQLEDQVMPKKCG 120

Query: 195 HTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGA 254
           H  GR++VS+EE V +IKAAVD R     D +I+ARTD+R    ++E+L R  A+ +AGA
Sbjct: 121 HMVGREIVSKEEMVGKIKAAVDTR--VNPDFMIMARTDARTTKGIDEALERGLAYKEAGA 178

Query: 255 DVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLI 314
           D++FI++   +EEMK   E  P    +ANM+E GG+TP+L   ELE LG+ +  YP + I
Sbjct: 179 DIIFIESPEGEEEMKRINETIPGYT-LANMVE-GGRTPLLKNAELEALGYNITIYPTASI 236

Query: 315 GVSVRAMQDALTAIKGGRIPS--PGSMPSFQEIKETLGFNTYYEEEKRYAT 363
            V+ +AM D  TA+K     +    +M +F E  + +G     E E  YAT
Sbjct: 237 YVATKAMVDLWTALKNDDTTAGVMDTMVTFSEFNDLMGLEKIREVEHNYAT 287
Catalyzes the formation of proponate and pyruvate from (2R,3S)-2,3-dimethylmalate. Has no activity toward dimethylmaleate, malate, citramalate, isocitrate and citrate.
Eubacterium barkeri (taxid: 1528)
EC: 4EC: .EC: 1EC: .EC: 3EC: .EC: 3EC: 2
>sp|P11435|CPPM_STRHY Carboxyvinyl-carboxyphosphonate phosphorylmutase OS=Streptomyces hygroscopicus GN=bcpA PE=1 SV=3 Back     alignment and function description
>sp|O49290|CPPM_ARATH Carboxyvinyl-carboxyphosphonate phosphorylmutase, chloroplastic OS=Arabidopsis thaliana GN=At1g77060 PE=1 SV=2 Back     alignment and function description
>sp|Q05957|PDP_DIACA Petal death protein OS=Dianthus caryophyllus GN=PDP PE=1 SV=1 Back     alignment and function description
>sp|Q9YFM7|PRPB_AERPE Methylisocitrate lyase OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=prpB PE=3 SV=2 Back     alignment and function description
>sp|Q9Z9T7|PRPB_BACHD Methylisocitrate lyase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=prpB PE=3 SV=1 Back     alignment and function description
>sp|P54528|PRPB_BACSU Methylisocitrate lyase OS=Bacillus subtilis (strain 168) GN=prpB PE=3 SV=1 Back     alignment and function description
>sp|Q8NSL2|PRPB2_CORGL Probable methylisocitrate lyase 2 OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=prpB2 PE=3 SV=1 Back     alignment and function description
>sp|Q8NSH8|PRPB1_CORGL Probable methylisocitrate lyase 1 OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=prpB1 PE=3 SV=1 Back     alignment and function description
>sp|P77541|PRPB_ECOLI Methylisocitrate lyase OS=Escherichia coli (strain K12) GN=prpB PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query462
225433752505 PREDICTED: 2,3-dimethylmalate lyase [Vit 0.831 0.760 0.795 0.0
297745157449 unnamed protein product [Vitis vinifera] 0.831 0.855 0.795 0.0
224065022504 predicted protein [Populus trichocarpa] 0.926 0.849 0.732 0.0
356527461466 PREDICTED: 2,3-dimethylmalate lyase-like 0.841 0.834 0.789 0.0
449468764496 PREDICTED: 2,3-dimethylmalate lyase-like 0.831 0.774 0.795 0.0
124360683478 Isocitrate lyase and phosphorylmutase [M 0.831 0.803 0.789 1e-180
357501473467 Isocitrate lyase [Medicago truncatula] g 0.807 0.798 0.781 1e-176
356569109424 PREDICTED: 2,3-dimethylmalate lyase-like 0.837 0.912 0.731 1e-168
255583854460 carboxyphosphonoenolpyruvate mutase, put 0.898 0.902 0.655 1e-165
357164560488 PREDICTED: 2,3-dimethylmalate lyase-like 0.822 0.778 0.723 1e-162
>gi|225433752|ref|XP_002267641.1| PREDICTED: 2,3-dimethylmalate lyase [Vitis vinifera] Back     alignment and taxonomy information
 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/386 (79%), Positives = 352/386 (91%), Gaps = 2/386 (0%)

Query: 76  SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISY 135
           +PAK LR+IL+ PGVHQGPACFDALSA+LVE++GF +CFTSGFSISAARL LPD G ISY
Sbjct: 86  APAKVLRRILDSPGVHQGPACFDALSAQLVERAGFQYCFTSGFSISAARLGLPDVGLISY 145

Query: 136 GEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGH 195
           GEM+DQG+ ITQAVSIPVIGDGDNGYGNAMNVKRTVK +I+AGFAGIILEDQVSPK CGH
Sbjct: 146 GEMLDQGRQITQAVSIPVIGDGDNGYGNAMNVKRTVKDFIRAGFAGIILEDQVSPKACGH 205

Query: 196 TRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGAD 255
           TRGRKVVSREEAVMRIKAA+DARKE+GSDIVIVARTDSRQA+S +ESL RSRAFA AGAD
Sbjct: 206 TRGRKVVSREEAVMRIKAAIDARKETGSDIVIVARTDSRQAVSFDESLWRSRAFASAGAD 265

Query: 256 VLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIG 315
           VLFIDAL+S+EEMKAFCEI+P VPKMANMLEGGGKTPILNP+ELE++G+K+V YPLSLIG
Sbjct: 266 VLFIDALSSREEMKAFCEIAPFVPKMANMLEGGGKTPILNPIELEDVGYKIVVYPLSLIG 325

Query: 316 VSVRAMQDALTAIKGGRIPSPGSMPSFQEIKETLGFNTYYEEEKRYATSMRRLSSENVTS 375
           VS+RAMQDAL AIKGGRIPSPGSMP+F+EIKETLGFN+YYEEEKRYATS  ++S +  +S
Sbjct: 326 VSIRAMQDALRAIKGGRIPSPGSMPTFEEIKETLGFNSYYEEEKRYATSKGQVSWQRASS 385

Query: 376 NSYDTQPMAQDDTARRGQSSQDPIVEVITPEVYTNSGAGGSRDAFSGIWSRTLRVKITGR 435
           N+Y +Q  AQDDT +RGQ+SQDP+VEV+TP+ Y   G  GS+  F+GIWSRTLR+KITGR
Sbjct: 386 NTYSSQQRAQDDTQQRGQNSQDPVVEVLTPDAYY--GPDGSKVPFAGIWSRTLRIKITGR 443

Query: 436 DGFEKLDVRIPAGFLDGITNVVPGIG 461
           DG +KLDVRIPAGFL+GITN+VP +G
Sbjct: 444 DGIDKLDVRIPAGFLEGITNIVPALG 469

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297745157|emb|CBI39149.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224065022|ref|XP_002301634.1| predicted protein [Populus trichocarpa] gi|222843360|gb|EEE80907.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356527461|ref|XP_003532329.1| PREDICTED: 2,3-dimethylmalate lyase-like [Glycine max] Back     alignment and taxonomy information
>gi|449468764|ref|XP_004152091.1| PREDICTED: 2,3-dimethylmalate lyase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|124360683|gb|ABN08672.1| Isocitrate lyase and phosphorylmutase [Medicago truncatula] Back     alignment and taxonomy information
>gi|357501473|ref|XP_003621025.1| Isocitrate lyase [Medicago truncatula] gi|355496040|gb|AES77243.1| Isocitrate lyase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356569109|ref|XP_003552748.1| PREDICTED: 2,3-dimethylmalate lyase-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|255583854|ref|XP_002532678.1| carboxyphosphonoenolpyruvate mutase, putative [Ricinus communis] gi|223527591|gb|EEF29706.1| carboxyphosphonoenolpyruvate mutase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357164560|ref|XP_003580094.1| PREDICTED: 2,3-dimethylmalate lyase-like [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query462
TAIR|locus:2041006479 AT2G43180 [Arabidopsis thalian 0.844 0.814 0.666 1e-132
UNIPROTKB|Q0QLE4289 Dml "2,3-dimethylmalate lyase" 0.616 0.986 0.405 1.9e-51
ASPGD|ASPL0000059587454 AN9369 [Emericella nidulans (t 0.556 0.566 0.416 8.5e-49
TAIR|locus:2025272339 AT1G77060 [Arabidopsis thalian 0.610 0.831 0.368 7.3e-43
TAIR|locus:2027022336 AT1G21440 [Arabidopsis thalian 0.612 0.842 0.37 3.2e-42
TIGR_CMR|BA_2350302 BA_2350 "carboxyvinyl-carboxyp 0.612 0.937 0.341 1.2e-41
TIGR_CMR|SPO_1470287 SPO_1470 "isocitrate lyase fam 0.573 0.923 0.335 2.4e-37
UNIPROTKB|P77541296 prpB "2-methylisocitrate lyase 0.601 0.939 0.341 2.2e-34
TIGR_CMR|CPS_2822296 CPS_2822 "putative methylisoci 0.603 0.942 0.336 2.2e-34
TIGR_CMR|SO_0345292 SO_0345 "methylisocitrate lyas 0.551 0.873 0.342 5.2e-33
TAIR|locus:2041006 AT2G43180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1301 (463.0 bits), Expect = 1.0e-132, P = 1.0e-132
 Identities = 272/408 (66%), Positives = 316/408 (77%)

Query:    56 GTINRTRVYRKNSTGVEACLSPAKSLRQILELPGVHQGPACFDALSAKLVEKXXXXXXXX 115
             G +N T V    S   +   SPAK LR I++ PGV QGP CFDALSAKL+E+        
Sbjct:    52 GAVNST-VVSDESGNAKLPSSPAKKLRNIMQSPGVLQGPCCFDALSAKLIERAGFPYCIT 110

Query:   116 XXXXXXAARLALPDTGFISYGEMVDQGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYI 175
                   A+RL LPD G ISYGEMVDQGQ ITQ+VSIPVIGDG NGYGNAMNVKRTVKGYI
Sbjct:   111 SGFSISASRLGLPDKGLISYGEMVDQGQQITQSVSIPVIGDGGNGYGNAMNVKRTVKGYI 170

Query:   176 KAGFAGIILEDQVSPKGCGHTRG-RKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR 234
             KAGFAGII+ D+V    C +T+  R+VVSREEAVMR+KAAVDAR+E  SDIVIVA+TDSR
Sbjct:   171 KAGFAGIIINDEVC---CENTKSERRVVSREEAVMRVKAAVDARRECDSDIVIVAQTDSR 227

Query:   235 QALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPIL 294
             +A+SLEESL R+RAF DAGADVL +D+L S+EEMKAFC + PLVPK+ANMLE GGK PIL
Sbjct:   228 EAISLEESLIRARAFTDAGADVLSVDSLVSREEMKAFCNVYPLVPKLANMLESGGKIPIL 287

Query:   295 NPLELEELGFKLVAYPLSLIGVSVRAMQDALTAIKGGRIPSPGSMPSFQEIKETLGFNTY 354
             NPLELEE+G+KLVAYP+SLIGVS++AMQDAL AIKGGRIP PGSM S +EI E LGF+TY
Sbjct:   288 NPLELEEIGYKLVAYPISLIGVSIQAMQDALLAIKGGRIPPPGSMASLEEIGEILGFDTY 347

Query:   355 YEEEKRYATSMRRLSSENVTSNS-YDTQPMAQDDTARRGQSSQDPIVEVITPEVYTNSGA 413
              EEEKRYATS    S   V+S+S Y  Q +A+DD  +R    +D IVEVITPEVY     
Sbjct:   348 EEEEKRYATSS---SDREVSSSSVYRNQRVAKDDPEQR----EDLIVEVITPEVYNEP-- 398

Query:   414 GGSRDAFSGIWSRTLRVKITGRDGFEKLDVRIPAGFLDGITNVVPGIG 461
                R+ FS IWSR+LR+KI GRDGFEKLDVRIPAGFL+G+TN+VP +G
Sbjct:   399 ---RNPFSRIWSRSLRIKIIGRDGFEKLDVRIPAGFLEGVTNIVPALG 443
GO:0003824 "catalytic activity" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IDA
UNIPROTKB|Q0QLE4 Dml "2,3-dimethylmalate lyase" [Eubacterium barkeri (taxid:1528)] Back     alignment and assigned GO terms
ASPGD|ASPL0000059587 AN9369 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TAIR|locus:2025272 AT1G77060 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027022 AT1G21440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|BA_2350 BA_2350 "carboxyvinyl-carboxyphosphonate phosphorylmutase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_1470 SPO_1470 "isocitrate lyase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
UNIPROTKB|P77541 prpB "2-methylisocitrate lyase" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_2822 CPS_2822 "putative methylisocitrate lyase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|SO_0345 SO_0345 "methylisocitrate lyase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query462
cd00377243 cd00377, ICL_PEPM, Members of the ICL/PEPM enzyme 3e-97
COG2513289 COG2513, PrpB, PEP phosphonomutase and related enz 8e-84
TIGR02317285 TIGR02317, prpB, methylisocitrate lyase 1e-71
TIGR02319294 TIGR02319, CPEP_Pphonmut, carboxyvinyl-carboxyphos 6e-61
PRK11320292 PRK11320, prpB, 2-methylisocitrate lyase; Provisio 6e-58
pfam13714238 pfam13714, PEP_mutase, Phosphoenolpyruvate phospho 2e-53
TIGR02320285 TIGR02320, PEP_mutase, phosphoenolpyruvate phospho 5e-28
TIGR02321290 TIGR02321, Pphn_pyruv_hyd, phosphonopyruvate hydro 2e-27
COG2224433 COG2224, AceA, Isocitrate lyase [Energy production 1e-16
TIGR01346527 TIGR01346, isocit_lyase, isocitrate lyase 2e-15
pfam00463526 pfam00463, ICL, Isocitrate lyase family 9e-14
PLN02892570 PLN02892, PLN02892, isocitrate lyase 2e-12
PRK15063428 PRK15063, PRK15063, isocitrate lyase; Provisional 1e-11
PRK06498531 PRK06498, PRK06498, isocitrate lyase; Provisional 5e-11
>gnl|CDD|119340 cd00377, ICL_PEPM, Members of the ICL/PEPM enzyme family catalyze either P-C or C-C bond formation/cleavage Back     alignment and domain information 
 Score =  292 bits (749), Expect = 3e-97
 Identities = 112/249 (44%), Positives = 160/249 (64%), Gaps = 8/249 (3%)

Query: 81  LRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVD 140
           LR +LE  G    P  +DALSA+L E++GF   +TSG  ++A+   LPD G ++  E++ 
Sbjct: 1   LRALLESGGPLVLPGAWDALSARLAERAGFKAIYTSGAGVAASL-GLPDGGLLTLDEVLA 59

Query: 141 QGQLITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRK 200
             + I +AV +PVI D D GYGNA+NV RTV+   +AG AGI +EDQV PK CGH  G+ 
Sbjct: 60  AVRRIARAVDLPVIADADTGYGNALNVARTVRELEEAGAAGIHIEDQVGPKKCGHHGGKV 119

Query: 201 VVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQA--LSLEESLRRSRAFADAGADVLF 258
           +V  EE V +IKAA DAR +   D VI+ARTD+  A    L+E++ R++A+A+AGAD +F
Sbjct: 120 LVPIEEFVAKIKAARDARDDL-PDFVIIARTDALLAGEEGLDEAIERAKAYAEAGADGIF 178

Query: 259 IDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGVSV 318
           ++ L   EE++AF E +P VP   NM  GG    +L   EL ELG + V+Y L+L+  + 
Sbjct: 179 VEGLKDPEEIRAFAE-APDVPLNVNMTPGGN---LLTVAELAELGVRRVSYGLALLRAAA 234

Query: 319 RAMQDALTA 327
           +AM++A   
Sbjct: 235 KAMREAARE 243

Known members are phosphoenolpyruvate mutase (PEPM), phosphonopyruvate hydrolase (PPH), carboxyPEP mutase (CPEP mutase), oxaloacetate hydrolase (OAH), isocitrate lyase (ICL), and 2-methylisocitrate lyase (MICL). Isocitrate lyase (ICL) catalyzes the conversion of isocitrate to succinate and glyoxylate, the first committed step in the glyoxylate pathway. This carbon-conserving pathway is present in most prokaryotes, lower eukaryotes and plants, but has not been observed in vertebrates. PEP mutase (PEPM) turns phosphoenolpyruvate (PEP) into phosphonopyruvate (P-pyr), an important intermediate in the formation of organophosphonates, which function as antibiotics or play a role in pathogenesis or signaling. P-pyr can be hydrolyzed by phosphonopyruvate hydrolase (PPH) to from pyruvate and phosphate. Oxaloacetate acetylhydrolase (OAH) catalyzes the hydrolytic cleavage of oxaloacetate to form acetate and oxalate, an important pathway to produce oxalate in filamentous fungi. 2-methylisocitrate lyase (MICL) cleaves 2-methylisocitrate to pyruvate and succinate, part of the methylcitrate cycle for the alpha-oxidation of propionate. Length = 243
>gnl|CDD|225311 COG2513, PrpB, PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|131370 TIGR02317, prpB, methylisocitrate lyase Back     alignment and domain information
>gnl|CDD|131372 TIGR02319, CPEP_Pphonmut, carboxyvinyl-carboxyphosphonate phosphorylmutase Back     alignment and domain information
>gnl|CDD|183086 PRK11320, prpB, 2-methylisocitrate lyase; Provisional Back     alignment and domain information
>gnl|CDD|222337 pfam13714, PEP_mutase, Phosphoenolpyruvate phosphomutase Back     alignment and domain information
>gnl|CDD|233820 TIGR02320, PEP_mutase, phosphoenolpyruvate phosphomutase Back     alignment and domain information
>gnl|CDD|131374 TIGR02321, Pphn_pyruv_hyd, phosphonopyruvate hydrolase Back     alignment and domain information
>gnl|CDD|225134 COG2224, AceA, Isocitrate lyase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|233364 TIGR01346, isocit_lyase, isocitrate lyase Back     alignment and domain information
>gnl|CDD|201244 pfam00463, ICL, Isocitrate lyase family Back     alignment and domain information
>gnl|CDD|215482 PLN02892, PLN02892, isocitrate lyase Back     alignment and domain information
>gnl|CDD|237893 PRK15063, PRK15063, isocitrate lyase; Provisional Back     alignment and domain information
>gnl|CDD|180592 PRK06498, PRK06498, isocitrate lyase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 462
PRK11320292 prpB 2-methylisocitrate lyase; Provisional 100.0
TIGR02317285 prpB methylisocitrate lyase. Members of this famil 100.0
COG2513289 PrpB PEP phosphonomutase and related enzymes [Carb 100.0
TIGR02319294 CPEP_Pphonmut carboxyvinyl-carboxyphosphonate phos 100.0
TIGR02321290 Pphn_pyruv_hyd phosphonopyruvate hydrolase. This f 100.0
PRK15063428 isocitrate lyase; Provisional 100.0
TIGR02320285 PEP_mutase phosphoenolpyruvate phosphomutase. A cl 100.0
PF13714238 PEP_mutase: Phosphoenolpyruvate phosphomutase; PDB 100.0
cd00377243 ICL_PEPM Members of the ICL/PEPM enzyme family cat 100.0
KOG1260492 consensus Isocitrate lyase [Energy production and 100.0
TIGR01346527 isocit_lyase isocitrate lyase. Isocitrate lyase an 100.0
COG2224433 AceA Isocitrate lyase [Energy production and conve 100.0
PLN02892570 isocitrate lyase 100.0
PF00463526 ICL: Isocitrate lyase family; InterPro: IPR000918 100.0
cd06556240 ICL_KPHMT Members of the ICL/PEPM_KPHMT enzyme sup 100.0
PRK06498531 isocitrate lyase; Provisional 100.0
cd06557254 KPHMT-like Ketopantoate hydroxymethyltransferase ( 100.0
PRK00311264 panB 3-methyl-2-oxobutanoate hydroxymethyltransfer 100.0
TIGR00222263 panB 3-methyl-2-oxobutanoate hydroxymethyltransfer 99.98
PLN02424332 ketopantoate hydroxymethyltransferase 99.97
PF02548261 Pantoate_transf: Ketopantoate hydroxymethyltransfe 99.94
COG0413268 PanB Ketopantoate hydroxymethyltransferase [Coenzy 99.92
KOG2949306 consensus Ketopantoate hydroxymethyltransferase [C 99.77
PF09370268 TIM-br_sig_trns: TIM-barrel signal transduction pr 98.11
cd00958235 DhnA Class I fructose-1,6-bisphosphate (FBP) aldol 98.0
PRK08185283 hypothetical protein; Provisional 97.99
TIGR01859282 fruc_bis_ald_ fructose-1,6-bisphosphate aldolase, 97.9
TIGR01037300 pyrD_sub1_fam dihydroorotate dehydrogenase (subfam 97.88
PRK06801286 hypothetical protein; Provisional 97.88
TIGR01949258 AroFGH_arch predicted phospho-2-dehydro-3-deoxyhep 97.76
cd00952309 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate 97.76
TIGR00343287 pyridoxal 5'-phosphate synthase, synthase subunit 97.75
cd02810289 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) 97.74
PRK04180293 pyridoxal biosynthesis lyase PdxS; Provisional 97.72
PRK07259301 dihydroorotate dehydrogenase 1B; Reviewed 97.71
cd00954288 NAL N-Acetylneuraminic acid aldolase, also called 97.7
cd04727283 pdxS PdxS is a subunit of the pyridoxal 5'-phospha 97.69
PRK07998283 gatY putative fructose-1,6-bisphosphate aldolase; 97.69
PRK13398266 3-deoxy-7-phosphoheptulonate synthase; Provisional 97.66
PRK12738286 kbaY tagatose-bisphosphate aldolase; Reviewed 97.65
cd00947276 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) a 97.64
PRK06806281 fructose-bisphosphate aldolase; Provisional 97.64
PRK09195284 gatY tagatose-bisphosphate aldolase; Reviewed 97.63
PRK07315293 fructose-bisphosphate aldolase; Provisional 97.62
PRK12857284 fructose-1,6-bisphosphate aldolase; Reviewed 97.61
TIGR02313294 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic ac 97.6
cd00945201 Aldolase_Class_I Class I aldolases. The class I al 97.58
TIGR01858282 tag_bisphos_ald class II aldolase, tagatose bispho 97.52
cd04740296 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c 97.52
PRK12737284 gatY tagatose-bisphosphate aldolase; Reviewed 97.51
TIGR00683290 nanA N-acetylneuraminate lyase. N-acetylneuraminat 97.5
PRK08673335 3-deoxy-7-phosphoheptulonate synthase; Reviewed 97.5
PRK13585241 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met 97.5
TIGR00167288 cbbA ketose-bisphosphate aldolases. fructose-bisph 97.5
PRK04147293 N-acetylneuraminate lyase; Provisional 97.48
cd04732234 HisA HisA. Phosphoribosylformimino-5-aminoimidazol 97.46
PRK00748233 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met 97.45
PLN02417280 dihydrodipicolinate synthase 97.45
PRK08610286 fructose-bisphosphate aldolase; Reviewed 97.45
cd00951289 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also 97.42
cd00945201 Aldolase_Class_I Class I aldolases. The class I al 97.42
TIGR00737319 nifR3_yhdG putative TIM-barrel protein, nifR3 fami 97.42
cd00408281 DHDPS-like Dihydrodipicolinate synthase family. A 97.39
TIGR00674285 dapA dihydrodipicolinate synthase. Dihydrodipicoli 97.37
TIGR00007230 phosphoribosylformimino-5-aminoimidazole carboxami 97.36
PRK03170292 dihydrodipicolinate synthase; Provisional 97.35
COG0329299 DapA Dihydrodipicolinate synthase/N-acetylneuramin 97.34
TIGR03249296 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-deh 97.34
TIGR00742318 yjbN tRNA dihydrouridine synthase A. Members of th 97.34
cd00953279 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolas 97.33
cd04731243 HisF The cyclase subunit of imidazoleglycerol phos 97.32
PRK13399347 fructose-1,6-bisphosphate aldolase; Provisional 97.27
PRK07709285 fructose-bisphosphate aldolase; Provisional 97.26
TIGR01361260 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate 97.24
cd00950284 DHDPS Dihydrodipicolinate synthase (DHDPS) is a ke 97.23
PRK13396352 3-deoxy-7-phosphoheptulonate synthase; Provisional 97.22
PRK03620303 5-dehydro-4-deoxyglucarate dehydratase; Provisiona 97.21
cd00331217 IGPS Indole-3-glycerol phosphate synthase (IGPS); 97.17
PF00701289 DHDPS: Dihydrodipicolinate synthetase family; Inte 97.17
PRK05286344 dihydroorotate dehydrogenase 2; Reviewed 97.15
PRK13397250 3-deoxy-7-phosphoheptulonate synthase; Provisional 97.13
PF01116287 F_bP_aldolase: Fructose-bisphosphate aldolase clas 97.1
PRK07565334 dihydroorotate dehydrogenase 2; Reviewed 97.07
PRK00278260 trpC indole-3-glycerol-phosphate synthase; Reviewe 97.06
TIGR03572232 WbuZ glycosyl amidation-associated protein WbuZ. T 97.05
PRK05835307 fructose-bisphosphate aldolase; Provisional 97.03
TIGR00736231 nifR3_rel_arch TIM-barrel protein, putative. Membe 97.01
PRK10415321 tRNA-dihydrouridine synthase B; Provisional 96.99
PRK12595360 bifunctional 3-deoxy-7-phosphoheptulonate synthase 96.98
cd04739325 DHOD_like Dihydroorotate dehydrogenase (DHOD) like 96.96
cd04740296 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c 96.92
COG0042323 tRNA-dihydrouridine synthase [Translation, ribosom 96.88
CHL00162267 thiG thiamin biosynthesis protein G; Validated 96.86
cd04738327 DHOD_2_like Dihydroorotate dehydrogenase (DHOD) cl 96.86
PRK11815333 tRNA-dihydrouridine synthase A; Provisional 96.85
PRK07084321 fructose-bisphosphate aldolase; Provisional 96.81
cd02801231 DUS_like_FMN Dihydrouridine synthase-like (DUS-lik 96.78
PRK05198264 2-dehydro-3-deoxyphosphooctonate aldolase; Provisi 96.78
PRK10550312 tRNA-dihydrouridine synthase C; Provisional 96.67
TIGR01521347 FruBisAldo_II_B fructose-bisphosphate aldolase, cl 96.62
PRK05437352 isopentenyl pyrophosphate isomerase; Provisional 96.61
PRK10128267 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional 96.61
cd02803327 OYE_like_FMN_family Old yellow enzyme (OYE)-like F 96.61
cd02809299 alpha_hydroxyacid_oxid_FMN Family of homologous FM 96.6
PLN02424332 ketopantoate hydroxymethyltransferase 96.59
PF05690247 ThiG: Thiazole biosynthesis protein ThiG; InterPro 96.57
PRK12457281 2-dehydro-3-deoxyphosphooctonate aldolase; Provisi 96.57
TIGR01362258 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. 96.53
cd02940299 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FM 96.48
cd00453340 FTBP_aldolase_II Fructose/tagarose-bisphosphate al 96.48
PRK02083253 imidazole glycerol phosphate synthase subunit HisF 96.46
cd02801231 DUS_like_FMN Dihydrouridine synthase-like (DUS-lik 96.44
PRK14024241 phosphoribosyl isomerase A; Provisional 96.43
TIGR00735254 hisF imidazoleglycerol phosphate synthase, cyclase 96.42
cd08205367 RuBisCO_IV_RLP Ribulose bisphosphate carboxylase l 96.39
PF01207309 Dus: Dihydrouridine synthase (Dus); InterPro: IPR0 96.39
PLN03033290 2-dehydro-3-deoxyphosphooctonate aldolase; Provisi 96.37
cd02930353 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-bindin 96.36
PRK07259301 dihydroorotate dehydrogenase 1B; Reviewed 96.34
TIGR02151333 IPP_isom_2 isopentenyl-diphosphate delta-isomerase 96.33
PRK09196347 fructose-1,6-bisphosphate aldolase; Reviewed 96.31
cd02932336 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN 96.31
cd02811326 IDI-2_FMN Isopentenyl-diphosphate:dimethylallyl di 96.29
cd08210364 RLP_RrRLP Ribulose bisphosphate carboxylase like p 96.28
cd02940299 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FM 96.26
TIGR00262256 trpA tryptophan synthase, alpha subunit. Tryptopha 96.24
PRK12331448 oxaloacetate decarboxylase; Provisional 96.2
PRK00208250 thiG thiazole synthase; Reviewed 96.19
cd00564196 TMP_TenI Thiamine monophosphate synthase (TMP synt 96.17
cd02810289 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) 96.09
cd00946345 FBP_aldolase_IIA Class II Type A, Fructose-1,6-bis 96.01
cd04728248 ThiG Thiazole synthase (ThiG) is the tetrameric en 96.0
PRK09197350 fructose-bisphosphate aldolase; Provisional 95.99
TIGR00222263 panB 3-methyl-2-oxobutanoate hydroxymethyltransfer 95.96
PRK14041467 oxaloacetate decarboxylase; Provisional 95.96
PRK07226267 fructose-bisphosphate aldolase; Provisional 95.93
cd04734343 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN 95.87
PRK12581468 oxaloacetate decarboxylase; Provisional 95.86
PRK12330 499 oxaloacetate decarboxylase; Provisional 95.84
PRK14042 596 pyruvate carboxylase subunit B; Provisional 95.83
PRK08318420 dihydropyrimidine dehydrogenase subunit B; Validat 95.83
cd03174265 DRE_TIM_metallolyase DRE-TIM metallolyase superfam 95.83
TIGR00737319 nifR3_yhdG putative TIM-barrel protein, nifR3 fami 95.82
PF02548261 Pantoate_transf: Ketopantoate hydroxymethyltransfe 95.8
PRK10558256 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Pro 95.8
COG5564276 Predicted TIM-barrel enzyme, possibly a dioxygenas 95.8
cd02911233 arch_FMN Archeal FMN-binding domain. This family o 95.79
PLN02591250 tryptophan synthase 95.76
PRK00043212 thiE thiamine-phosphate pyrophosphorylase; Reviewe 95.71
PRK08318420 dihydropyrimidine dehydrogenase subunit B; Validat 95.67
PRK04302223 triosephosphate isomerase; Provisional 95.63
cd04741294 DHOD_1A_like Dihydroorotate dehydrogenase (DHOD) c 95.56
cd04733338 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN 95.49
PRK01130221 N-acetylmannosamine-6-phosphate 2-epimerase; Provi 95.45
cd06557254 KPHMT-like Ketopantoate hydroxymethyltransferase ( 95.45
PRK12999 1146 pyruvate carboxylase; Reviewed 95.44
TIGR01037300 pyrD_sub1_fam dihydroorotate dehydrogenase (subfam 95.38
PRK09282 592 pyruvate carboxylase subunit B; Validated 95.37
TIGR01520357 FruBisAldo_II_A fructose-bisphosphate aldolase, cl 95.36
PRK01033258 imidazole glycerol phosphate synthase subunit HisF 95.32
PF03932201 CutC: CutC family; InterPro: IPR005627 Copper tran 95.27
cd04730236 NPD_like 2-Nitropropane dioxygenase (NPD), one of 95.24
PRK00311264 panB 3-methyl-2-oxobutanoate hydroxymethyltransfer 95.14
cd04722200 TIM_phosphate_binding TIM barrel proteins share a 95.05
cd04728248 ThiG Thiazole synthase (ThiG) is the tetrameric en 94.96
TIGR00126211 deoC deoxyribose-phosphate aldolase. Deoxyribose-p 94.95
PRK05692287 hydroxymethylglutaryl-CoA lyase; Provisional 94.91
PF01791236 DeoC: DeoC/LacD family aldolase; InterPro: IPR0029 94.9
cd02931382 ER_like_FMN Enoate reductase (ER)-like FMN-binding 94.9
PRK14040 593 oxaloacetate decarboxylase; Provisional 94.87
PLN028581378 fructose-bisphosphate aldolase 94.84
TIGR03151307 enACPred_II putative enoyl-(acyl-carrier-protein) 94.81
TIGR00736231 nifR3_rel_arch TIM-barrel protein, putative. Membe 94.8
TIGR01108 582 oadA oxaloacetate decarboxylase alpha subunit. Thi 94.73
cd02932336 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN 94.73
cd04729219 NanE N-acetylmannosamine-6-phosphate epimerase (Na 94.61
PF04131192 NanE: Putative N-acetylmannosamine-6-phosphate epi 94.61
CHL00200263 trpA tryptophan synthase alpha subunit; Provisiona 94.59
cd04733338 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN 94.57
TIGR03239249 GarL 2-dehydro-3-deoxyglucarate aldolase. In E. co 94.57
cd06556240 ICL_KPHMT Members of the ICL/PEPM_KPHMT enzyme sup 94.52
PF00682237 HMGL-like: HMGL-like of this family is not conserv 94.51
COG2022262 ThiG Uncharacterized enzyme of thiazole biosynthes 94.44
PF05690247 ThiG: Thiazole biosynthesis protein ThiG; InterPro 94.36
cd02803327 OYE_like_FMN_family Old yellow enzyme (OYE)-like F 94.31
cd02809299 alpha_hydroxyacid_oxid_FMN Family of homologous FM 94.23
PRK15452443 putative protease; Provisional 94.21
cd02933338 OYE_like_FMN Old yellow enzyme (OYE)-like FMN bind 94.17
cd04723233 HisA_HisF Phosphoribosylformimino-5-aminoimidazole 94.17
TIGR01163210 rpe ribulose-phosphate 3-epimerase. This family co 94.17
PRK11572248 copper homeostasis protein CutC; Provisional 94.16
PRK05848273 nicotinate-nucleotide pyrophosphorylase; Provision 94.16
cd00959203 DeoC 2-deoxyribose-5-phosphate aldolase (DERA) of 94.06
cd03316357 MR_like Mandelate racemase (MR)-like subfamily of 94.04
TIGR00693196 thiE thiamine-phosphate pyrophosphorylase. This mo 94.01
PRK13111258 trpA tryptophan synthase subunit alpha; Provisiona 94.01
cd04739325 DHOD_like Dihydroorotate dehydrogenase (DHOD) like 93.95
TIGR01740213 pyrF orotidine 5'-phosphate decarboxylase, subfami 93.95
PRK00208250 thiG thiazole synthase; Reviewed 93.92
PRK06852304 aldolase; Validated 93.9
cd02911233 arch_FMN Archeal FMN-binding domain. This family o 93.84
cd03315265 MLE_like Muconate lactonizing enzyme (MLE) like su 93.81
PRK09250348 fructose-bisphosphate aldolase; Provisional 93.8
TIGR01305343 GMP_reduct_1 guanosine monophosphate reductase, eu 93.75
PRK06512221 thiamine-phosphate pyrophosphorylase; Provisional 93.73
PRK09490 1229 metH B12-dependent methionine synthase; Provisiona 93.7
TIGR01304369 IMP_DH_rel_2 IMP dehydrogenase family protein. Thi 93.7
cd04735353 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN 93.66
PRK07695201 transcriptional regulator TenI; Provisional 93.63
COG0826347 Collagenase and related proteases [Posttranslation 93.61
KOG2335358 consensus tRNA-dihydrouridine synthase [Translatio 93.6
PRK05286344 dihydroorotate dehydrogenase 2; Reviewed 93.59
PRK14017382 galactonate dehydratase; Provisional 93.58
cd07937275 DRE_TIM_PC_TC_5S Pyruvate carboxylase and Transcar 93.54
cd03321355 mandelate_racemase Mandelate racemase (MR) catalyz 93.52
cd00381325 IMPDH IMPDH: The catalytic domain of the inosine m 93.48
PRK05692287 hydroxymethylglutaryl-CoA lyase; Provisional 93.48
TIGR02311249 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola 93.47
PRK08649368 inosine 5-monophosphate dehydrogenase; Validated 93.45
COG2513289 PrpB PEP phosphonomutase and related enzymes [Carb 93.42
PF04131192 NanE: Putative N-acetylmannosamine-6-phosphate epi 93.4
PRK07807479 inosine 5-monophosphate dehydrogenase; Validated 93.36
PRK07565334 dihydroorotate dehydrogenase 2; Reviewed 93.35
PRK13587234 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met 93.31
PRK10415321 tRNA-dihydrouridine synthase B; Provisional 93.3
PLN02746347 hydroxymethylglutaryl-CoA lyase 93.27
TIGR01769205 GGGP geranylgeranylglyceryl phosphate synthase. Th 93.27
PRK08195337 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic ac 93.25
COG0826347 Collagenase and related proteases [Posttranslation 93.23
cd04741294 DHOD_1A_like Dihydroorotate dehydrogenase (DHOD) c 93.21
PRK11858378 aksA trans-homoaconitate synthase; Reviewed 93.2
COG0434263 SgcQ Predicted TIM-barrel enzyme [General function 93.11
COG0413268 PanB Ketopantoate hydroxymethyltransferase [Coenzy 93.02
TIGR01302450 IMP_dehydrog inosine-5'-monophosphate dehydrogenas 93.01
TIGR02082 1178 metH 5-methyltetrahydrofolate--homocysteine methyl 92.98
PF03932201 CutC: CutC family; InterPro: IPR005627 Copper tran 92.95
PF03437254 BtpA: BtpA family; InterPro: IPR005137 Photosystem 92.94
PRK13125244 trpA tryptophan synthase subunit alpha; Provisiona 92.86
cd04729219 NanE N-acetylmannosamine-6-phosphate epimerase (Na 92.84
PRK11613282 folP dihydropteroate synthase; Provisional 92.74
cd00381325 IMPDH IMPDH: The catalytic domain of the inosine m 92.69
PF01729169 QRPTase_C: Quinolinate phosphoribosyl transferase, 92.68
PRK13523337 NADPH dehydrogenase NamA; Provisional 92.66
PRK01130221 N-acetylmannosamine-6-phosphate 2-epimerase; Provi 92.62
PF02581180 TMP-TENI: Thiamine monophosphate synthase/TENI; In 92.61
PRK07028430 bifunctional hexulose-6-phosphate synthase/ribonuc 92.6
PRK02615347 thiamine-phosphate pyrophosphorylase; Provisional 92.56
PRK11572248 copper homeostasis protein CutC; Provisional 92.49
cd04724242 Tryptophan_synthase_alpha Ttryptophan synthase (TR 92.46
cd03329368 MR_like_4 Mandelate racemase (MR)-like subfamily o 92.45
PRK08255765 salicylyl-CoA 5-hydroxylase; Reviewed 92.45
PRK13523337 NADPH dehydrogenase NamA; Provisional 92.43
cd04824320 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthas 92.4
TIGR01306321 GMP_reduct_2 guanosine monophosphate reductase, ba 92.34
PLN02495385 oxidoreductase, acting on the CH-CH group of donor 92.29
PLN02274505 inosine-5'-monophosphate dehydrogenase 92.29
TIGR02151333 IPP_isom_2 isopentenyl-diphosphate delta-isomerase 92.28
COG2022262 ThiG Uncharacterized enzyme of thiazole biosynthes 92.24
cd04725216 OMP_decarboxylase_like Orotidine 5'-phosphate deca 92.22
TIGR01302450 IMP_dehydrog inosine-5'-monophosphate dehydrogenas 92.21
cd03325352 D-galactonate_dehydratase D-galactonate dehydratas 92.18
PF00478352 IMPDH: IMP dehydrogenase / GMP reductase domain; I 92.17
TIGR01303475 IMP_DH_rel_1 IMP dehydrogenase family protein. Thi 92.16
cd04736361 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-bin 92.12
TIGR03151307 enACPred_II putative enoyl-(acyl-carrier-protein) 92.11
cd07945280 DRE_TIM_CMS Leptospira interrogans citramalate syn 92.05
cd04737351 LOX_like_FMN L-Lactate oxidase (LOX) FMN-binding d 91.91
cd07948262 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate s 91.9
PF13714238 PEP_mutase: Phosphoenolpyruvate phosphomutase; PDB 91.86
PF01207309 Dus: Dihydrouridine synthase (Dus); InterPro: IPR0 91.86
TIGR00035229 asp_race aspartate racemase. 91.85
TIGR00640132 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal 91.83
TIGR02127261 pyrF_sub2 orotidine 5'-phosphate decarboxylase, su 91.77
cd02930353 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-bindin 91.76
cd04747361 OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN 91.76
cd07944266 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase- 91.68
TIGR02660365 nifV_homocitr homocitrate synthase NifV. This fami 91.67
KOG1260492 consensus Isocitrate lyase [Energy production and 91.65
cd03327341 MR_like_2 Mandelate racemase (MR)-like subfamily o 91.62
PF01729169 QRPTase_C: Quinolinate phosphoribosyl transferase, 91.56
PRK09485304 mmuM homocysteine methyltransferase; Provisional 91.54
PRK08385278 nicotinate-nucleotide pyrophosphorylase; Provision 91.53
TIGR00259257 thylakoid_BtpA membrane complex biogenesis protein 91.53
PRK06843404 inosine 5-monophosphate dehydrogenase; Validated 91.49
PRK06096284 molybdenum transport protein ModD; Provisional 91.46
cd04738327 DHOD_2_like Dihydroorotate dehydrogenase (DHOD) cl 91.45
PLN02746347 hydroxymethylglutaryl-CoA lyase 91.4
PRK06559290 nicotinate-nucleotide pyrophosphorylase; Provision 91.35
PTZ00314495 inosine-5'-monophosphate dehydrogenase; Provisiona 91.34
cd03332383 LMO_FMN L-Lactate 2-monooxygenase (LMO) FMN-bindin 91.3
PRK11840326 bifunctional sulfur carrier protein/thiazole synth 91.28
cd02811326 IDI-2_FMN Isopentenyl-diphosphate:dimethylallyl di 91.24
PRK10550312 tRNA-dihydrouridine synthase C; Provisional 91.23
TIGR03128206 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the 91.23
COG0157280 NadC Nicotinate-nucleotide pyrophosphorylase [Coen 91.18
cd03323395 D-glucarate_dehydratase D-Glucarate dehydratase (G 91.11
cd04724242 Tryptophan_synthase_alpha Ttryptophan synthase (TR 91.1
PRK08227264 autoinducer 2 aldolase; Validated 91.02
cd03319316 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase cat 90.97
COG3836255 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola 90.96
cd07943263 DRE_TIM_HOA 4-hydroxy-2-oxovalerate aldolase, N-te 90.95
PF00478352 IMPDH: IMP dehydrogenase / GMP reductase domain; I 90.75
COG0352211 ThiE Thiamine monophosphate synthase [Coenzyme met 90.66
cd07941273 DRE_TIM_LeuA3 Desulfobacterium autotrophicum LeuA3 90.64
COG2876286 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate ( 90.6
PRK11858378 aksA trans-homoaconitate synthase; Reviewed 90.56
TIGR01496257 DHPS dihydropteroate synthase. This model represen 90.54
TIGR03247441 glucar-dehydr glucarate dehydratase. Glucarate deh 90.52
PRK09389 488 (R)-citramalate synthase; Provisional 90.48
TIGR01303475 IMP_DH_rel_1 IMP dehydrogenase family protein. Thi 90.48
cd03328352 MR_like_3 Mandelate racemase (MR)-like subfamily o 90.43
TIGR02708367 L_lactate_ox L-lactate oxidase. Members of this pr 90.41
TIGR03217333 4OH_2_O_val_ald 4-hydroxy-2-oxovalerate aldolase. 90.33
cd03326385 MR_like_1 Mandelate racemase (MR)-like subfamily o 90.29
cd00331217 IGPS Indole-3-glycerol phosphate synthase (IGPS); 90.27
PRK08195337 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic ac 90.26
PRK15452 443 putative protease; Provisional 90.25
TIGR00742318 yjbN tRNA dihydrouridine synthase A. Members of th 90.2
cd07948262 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate s 90.1
cd04730236 NPD_like 2-Nitropropane dioxygenase (NPD), one of 90.08
PRK07107502 inosine 5-monophosphate dehydrogenase; Validated 90.06
PRK06978294 nicotinate-nucleotide pyrophosphorylase; Provision 90.06
PLN02334229 ribulose-phosphate 3-epimerase 90.02
PRK05848273 nicotinate-nucleotide pyrophosphorylase; Provision 89.97
PRK10605362 N-ethylmaleimide reductase; Provisional 89.92
TIGR01334277 modD putative molybdenum utilization protein ModD. 89.9
PRK15052421 D-tagatose-1,6-bisphosphate aldolase subunit GatZ; 89.88
PRK05458326 guanosine 5'-monophosphate oxidoreductase; Provisi 89.86
TIGR03217333 4OH_2_O_val_ald 4-hydroxy-2-oxovalerate aldolase. 89.85
PLN02489335 homocysteine S-methyltransferase 89.79
PLN02535364 glycolate oxidase 89.74
PRK10128267 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional 89.74
cd00564196 TMP_TenI Thiamine monophosphate synthase (TMP synt 89.71
PRK15458426 tagatose 6-phosphate aldolase subunit KbaZ; Provis 89.61
TIGR03239249 GarL 2-dehydro-3-deoxyglucarate aldolase. In E. co 89.58
TIGR02660365 nifV_homocitr homocitrate synthase NifV. This fami 89.54
TIGR02320285 PEP_mutase phosphoenolpyruvate phosphomutase. A cl 89.54
PRK06543281 nicotinate-nucleotide pyrophosphorylase; Provision 89.44
PRK00125278 pyrF orotidine 5'-phosphate decarboxylase; Reviewe 89.39
PLN03228503 methylthioalkylmalate synthase; Provisional 89.38
PRK10558256 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Pro 89.2
PRK05096346 guanosine 5'-monophosphate oxidoreductase; Provisi 89.19
TIGR02311249 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola 89.13
TIGR03849237 arch_ComA phosphosulfolactate synthase. This model 89.12
COG3010229 NanE Putative N-acetylmannosamine-6-phosphate epim 89.05
PF03328221 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family 88.99
PLN02274505 inosine-5'-monophosphate dehydrogenase 88.97
cd02922344 FCB2_FMN Flavocytochrome b2 (FCB2) FMN-binding dom 88.9
cd02933338 OYE_like_FMN Old yellow enzyme (OYE)-like FMN bind 88.86
PRK11197381 lldD L-lactate dehydrogenase; Provisional 88.83
TIGR01334277 modD putative molybdenum utilization protein ModD. 88.63
PRK02506310 dihydroorotate dehydrogenase 1A; Reviewed 88.57
PRK08649368 inosine 5-monophosphate dehydrogenase; Validated 88.5
PRK00507221 deoxyribose-phosphate aldolase; Provisional 88.38
PRK05437352 isopentenyl pyrophosphate isomerase; Provisional 88.35
TIGR02090363 LEU1_arch isopropylmalate/citramalate/homocitrate 88.28
CHL00162267 thiG thiamin biosynthesis protein G; Validated 88.2
PRK07896289 nicotinate-nucleotide pyrophosphorylase; Provision 88.19
COG0269217 SgbH 3-hexulose-6-phosphate synthase and related p 88.15
TIGR01235 1143 pyruv_carbox pyruvate carboxylase. This enzyme pla 88.09
COG1794230 RacX Aspartate racemase [Cell envelope biogenesis, 88.06
cd03322361 rpsA The starvation sensing protein RpsA from E.co 88.0
PRK02714320 O-succinylbenzoate synthase; Provisional 87.99
PRK05567486 inosine 5'-monophosphate dehydrogenase; Reviewed 87.96
TIGR02708367 L_lactate_ox L-lactate oxidase. Members of this pr 87.92
TIGR01304369 IMP_DH_rel_2 IMP dehydrogenase family protein. Thi 87.91
PF00490324 ALAD: Delta-aminolevulinic acid dehydratase; Inter 87.87
PRK05458326 guanosine 5'-monophosphate oxidoreductase; Provisi 87.85
PF02219287 MTHFR: Methylenetetrahydrofolate reductase; InterP 87.84
PF00290259 Trp_syntA: Tryptophan synthase alpha chain; InterP 87.79
PRK05105322 O-succinylbenzoate synthase; Provisional 87.77
PRK06106281 nicotinate-nucleotide pyrophosphorylase; Provision 87.72
COG1830265 FbaB DhnA-type fructose-1,6-bisphosphate aldolase 87.69
cd04726202 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxyl 87.69
cd00452190 KDPG_aldolase KDPG and KHG aldolase. This family b 87.64
PRK05567486 inosine 5'-monophosphate dehydrogenase; Reviewed 87.61
cd07944266 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase- 87.57
cd03324415 rTSbeta_L-fuconate_dehydratase Human rTS beta is e 87.44
cd04732234 HisA HisA. Phosphoribosylformimino-5-aminoimidazol 87.43
PRK05742277 nicotinate-nucleotide pyrophosphorylase; Provision 87.39
PLN02495385 oxidoreductase, acting on the CH-CH group of donor 87.34
PRK05581220 ribulose-phosphate 3-epimerase; Validated 87.33
PLN02716308 nicotinate-nucleotide diphosphorylase (carboxylati 87.25
cd04734343 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN 86.96
PRK12858340 tagatose 1,6-diphosphate aldolase; Reviewed 86.95
PRK11815333 tRNA-dihydrouridine synthase A; Provisional 86.86
PRK07534336 methionine synthase I; Validated 86.85
cd02929370 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) 86.82
CHL00200263 trpA tryptophan synthase alpha subunit; Provisiona 86.79
PRK09016296 quinolinate phosphoribosyltransferase; Validated 86.74
cd02812219 PcrB_like PcrB_like proteins. One member of this f 86.67
PRK13753279 dihydropteroate synthase; Provisional 86.63
PRK00915513 2-isopropylmalate synthase; Validated 86.44
PRK03512211 thiamine-phosphate pyrophosphorylase; Provisional 86.37
PLN02979366 glycolate oxidase 86.27
cd02931382 ER_like_FMN Enoate reductase (ER)-like FMN-binding 86.2
PTZ00314495 inosine-5'-monophosphate dehydrogenase; Provisiona 86.18
COG4948372 L-alanine-DL-glutamate epimerase and related enzym 86.1
PF03060330 NMO: Nitronate monooxygenase; InterPro: IPR004136 86.06
COG0821361 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphat 85.98
TIGR00612346 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-dipho 85.93
PRK13957247 indole-3-glycerol-phosphate synthase; Provisional 85.86
PF01070356 FMN_dh: FMN-dependent dehydrogenase; InterPro: IPR 85.86
PRK10605362 N-ethylmaleimide reductase; Provisional 85.83
PRK00915 513 2-isopropylmalate synthase; Validated 85.79
cd04737351 LOX_like_FMN L-Lactate oxidase (LOX) FMN-binding d 85.78
PRK08999312 hypothetical protein; Provisional 85.74
PF00977229 His_biosynth: Histidine biosynthesis protein; Inte 85.71
cd02922344 FCB2_FMN Flavocytochrome b2 (FCB2) FMN-binding dom 85.52
PRK00366360 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate s 85.49
TIGR00973494 leuA_bact 2-isopropylmalate synthase, bacterial ty 85.42
PRK13384322 delta-aminolevulinic acid dehydratase; Provisional 85.36
cd03174265 DRE_TIM_metallolyase DRE-TIM metallolyase superfam 85.35
cd08207406 RLP_NonPhot Ribulose bisphosphate carboxylase like 85.32
PLN03228503 methylthioalkylmalate synthase; Provisional 85.23
PLN02493367 probable peroxisomal (S)-2-hydroxy-acid oxidase 85.11
PRK07896289 nicotinate-nucleotide pyrophosphorylase; Provision 85.09
PRK13111258 trpA tryptophan synthase subunit alpha; Provisiona 85.06
PRK00230230 orotidine 5'-phosphate decarboxylase; Reviewed 84.98
PRK09140206 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; R 84.98
cd03318365 MLE Muconate Lactonizing Enzyme (MLE), an homoocta 84.96
cd00739257 DHPS DHPS subgroup of Pterin binding enzymes. DHPS 84.95
PRK08645 612 bifunctional homocysteine S-methyltransferase/5,10 84.85
PRK07534336 methionine synthase I; Validated 84.82
PF02679244 ComA: (2R)-phospho-3-sulfolactate synthase (ComA); 84.78
TIGR02810420 agaZ_gatZ D-tagatose-bisphosphate aldolase, class 84.64
PRK07107502 inosine 5-monophosphate dehydrogenase; Validated 84.63
TIGR02090363 LEU1_arch isopropylmalate/citramalate/homocitrate 84.58
TIGR03586327 PseI pseudaminic acid synthase. 84.57
cd04722200 TIM_phosphate_binding TIM barrel proteins share a 84.52
COG0113330 HemB Delta-aminolevulinic acid dehydratase [Coenzy 84.44
cd08209391 RLP_DK-MTP-1-P-enolase 2,3-diketo-5-methylthiopent 84.33
cd08213412 RuBisCO_large_III Ribulose bisphosphate carboxylas 84.27
PLN02321 632 2-isopropylmalate synthase 84.13
PRK06843404 inosine 5-monophosphate dehydrogenase; Validated 84.11
cd07940268 DRE_TIM_IPMS 2-isopropylmalate synthase (IPMS), N- 84.11
TIGR01927307 menC_gamma/gm+ o-succinylbenzoic acid (OSB) synthe 84.02
PLN02898502 HMP-P kinase/thiamin-monophosphate pyrophosphoryla 83.99
COG0646311 MetH Methionine synthase I (cobalamin-dependent), 83.88
PLN02321 632 2-isopropylmalate synthase 83.79
PRK09283323 delta-aminolevulinic acid dehydratase; Validated 83.79
COG0269217 SgbH 3-hexulose-6-phosphate synthase and related p 83.78
PRK05500477 bifunctional orotidine 5'-phosphate decarboxylase/ 83.74
cd04735353 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN 83.71
cd00377243 ICL_PEPM Members of the ICL/PEPM enzyme family cat 83.57
PF01680208 SOR_SNZ: SOR/SNZ family; InterPro: IPR001852 Snz1p 83.46
cd08148366 RuBisCO_large Ribulose bisphosphate carboxylase la 83.46
TIGR03128206 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the 83.44
PRK00278260 trpC indole-3-glycerol-phosphate synthase; Reviewe 83.39
TIGR00973 494 leuA_bact 2-isopropylmalate synthase, bacterial ty 83.37
cd07938274 DRE_TIM_HMGL 3-hydroxy-3-methylglutaryl-CoA lyase, 83.14
PLN02826409 dihydroorotate dehydrogenase 83.07
COG0159265 TrpA Tryptophan synthase alpha chain [Amino acid t 83.01
cd00384314 ALAD_PBGS Porphobilinogen synthase (PBGS), which i 82.89
PRK10200230 putative racemase; Provisional 82.69
PRK07695201 transcriptional regulator TenI; Provisional 82.67
COG0167310 PyrD Dihydroorotate dehydrogenase [Nucleotide tran 82.56
PRK00043212 thiE thiamine-phosphate pyrophosphorylase; Reviewe 82.53
TIGR01306321 GMP_reduct_2 guanosine monophosphate reductase, ba 82.43
TIGR03569329 NeuB_NnaB N-acetylneuraminate synthase. This famil 82.34
PRK08508279 biotin synthase; Provisional 82.26
PF01180295 DHO_dh: Dihydroorotate dehydrogenase; InterPro: IP 82.15
KOG1606296 consensus Stationary phase-induced protein, SOR/SN 81.98
PRK09389488 (R)-citramalate synthase; Provisional 81.93
PLN02591250 tryptophan synthase 81.93
TIGR03326412 rubisco_III ribulose bisphosphate carboxylase, typ 81.87
PRK04452319 acetyl-CoA decarbonylase/synthase complex subunit 81.83
PRK01033258 imidazole glycerol phosphate synthase subunit HisF 81.8
PRK06256336 biotin synthase; Validated 81.73
PRK12858340 tagatose 1,6-diphosphate aldolase; Reviewed 81.73
PRK02901327 O-succinylbenzoate synthase; Provisional 81.61
PLN02980 1655 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi 81.6
PRK08072277 nicotinate-nucleotide pyrophosphorylase; Provision 81.59
PRK05718212 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 81.51
TIGR02317285 prpB methylisocitrate lyase. Members of this famil 81.48
TIGR01305343 GMP_reduct_1 guanosine monophosphate reductase, eu 81.43
TIGR01949258 AroFGH_arch predicted phospho-2-dehydro-3-deoxyhep 81.33
COG0434263 SgcQ Predicted TIM-barrel enzyme [General function 81.27
TIGR02082 1178 metH 5-methyltetrahydrofolate--homocysteine methyl 81.25
PRK07428288 nicotinate-nucleotide pyrophosphorylase; Provision 81.25
cd00429211 RPE Ribulose-5-phosphate 3-epimerase (RPE). This e 81.17
PRK11320292 prpB 2-methylisocitrate lyase; Provisional 80.85
COG0119409 LeuA Isopropylmalate/homocitrate/citramalate synth 80.84
cd07940268 DRE_TIM_IPMS 2-isopropylmalate synthase (IPMS), N- 80.81
cd07939259 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and 80.68
cd08209391 RLP_DK-MTP-1-P-enolase 2,3-diketo-5-methylthiopent 80.6
cd07938274 DRE_TIM_HMGL 3-hydroxy-3-methylglutaryl-CoA lyase, 80.35
COG2875254 CobM Precorrin-4 methylase [Coenzyme metabolism] 80.32
cd03320263 OSBS o-Succinylbenzoate synthase (OSBS) catalyzes 80.23
TIGR03332407 salvage_mtnW 2,3-diketo-5-methylthiopentyl-1-phosp 80.13
cd04726202 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxyl 80.1
cd00959203 DeoC 2-deoxyribose-5-phosphate aldolase (DERA) of 80.08
PRK15072404 bifunctional D-altronate/D-mannonate dehydratase; 80.07
>PRK11320 prpB 2-methylisocitrate lyase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.2e-74  Score=572.30  Aligned_cols=286  Identities=36%  Similarity=0.557  Sum_probs=269.8

Q ss_pred             CchHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEE
Q 012478           75 LSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVI  154 (462)
Q Consensus        75 ~~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVI  154 (462)
                      |.++++||++|++++++++||+||++|||++|++||+++|+||+++|++++|+||.+++|++||++++++|++++++|||
T Consensus         3 ~~~~~~lr~ll~~~~~l~~p~~~Da~SAri~e~~Gf~ai~~Sg~~~a~~~lG~PD~g~l~~~e~~~~~~~I~~~~~iPvi   82 (292)
T PRK11320          3 HSAGARFRAALAAEKPLQIVGTINAYHALLAERAGFKAIYLSGGGVAAASLGLPDLGITTLDDVLIDVRRITDACDLPLL   82 (292)
T ss_pred             CCHHHHHHHHHcCCCcEEecCCCCHHHHHHHHHcCCCEEEeCHHHHHhHhcCCCCCCCCCHHHHHHHHHHHHhccCCCEE
Confidence            45577899999999999999999999999999999999999999998778999999999999999999999999999999


Q ss_pred             EeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchh
Q 012478          155 GDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR  234 (462)
Q Consensus       155 aD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~  234 (462)
                      ||+|+|||++.|++++|++|+++||+|||||||++||+|||+.||+|+|.+||++||+||++|++  ++||+|+||||++
T Consensus        83 aD~d~GyG~~~~v~r~V~~~~~aGaagi~IEDq~~pK~cg~~~~~~lv~~ee~~~kI~Aa~~a~~--~~d~~IiARTDa~  160 (292)
T PRK11320         83 VDIDTGFGGAFNIARTVKSMIKAGAAAVHIEDQVGAKRCGHRPNKEIVSQEEMVDRIKAAVDART--DPDFVIMARTDAL  160 (292)
T ss_pred             EECCCCCCCHHHHHHHHHHHHHcCCeEEEEecCCCccccCCCCCCcccCHHHHHHHHHHHHHhcc--CCCeEEEEecCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999987  5899999999999


Q ss_pred             hcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHH
Q 012478          235 QALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLI  314 (462)
Q Consensus       235 ~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll  314 (462)
                      ...++||||+|+++|.+||||+||+|++++.++++++++.++ +|+++|++++ +++|.++.+||++|||++|+||++++
T Consensus       161 ~~~g~deAI~Ra~aY~eAGAD~ifi~~~~~~~~i~~~~~~~~-~Pl~~n~~~~-~~~p~~s~~~L~~lGv~~v~~~~~~~  238 (292)
T PRK11320        161 AVEGLDAAIERAQAYVEAGADMIFPEAMTELEMYRRFADAVK-VPILANITEF-GATPLFTTEELASAGVAMVLYPLSAF  238 (292)
T ss_pred             cccCHHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHhcC-CCEEEEeccC-CCCCCCCHHHHHHcCCcEEEEChHHH
Confidence            888999999999999999999999999999999999999997 6999999986 67899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHcC-CC-CCCCCCCCHHHHHHhcCcccHH-HHHHhhccc
Q 012478          315 GVSVRAMQDALTAIKGG-RI-PSPGSMPSFQEIKETLGFNTYY-EEEKRYATS  364 (462)
Q Consensus       315 ~aa~~Am~~~l~~l~~g-~~-~~~~~~~s~~e~~~lvg~~~~~-~~e~~y~~~  364 (462)
                      ++++++|+++++.|++. .. ...+.+++|+|+++++||++|. .+|++|...
T Consensus       239 ~aa~~a~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  291 (292)
T PRK11320        239 RAMNKAAENVYEAIRRDGTQKAVVDTMQTREELYEYLGYHAYEQKLDALFAQK  291 (292)
T ss_pred             HHHHHHHHHHHHHHHHcCCcccchhccCCHHHHHHhcCcHHHHHHHHHHhccC
Confidence            99999999999999864 33 3456688999999999999999 788888653

>TIGR02317 prpB methylisocitrate lyase Back     alignment and domain information
>COG2513 PrpB PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02319 CPEP_Pphonmut carboxyvinyl-carboxyphosphonate phosphorylmutase Back     alignment and domain information
>TIGR02321 Pphn_pyruv_hyd phosphonopyruvate hydrolase Back     alignment and domain information
>PRK15063 isocitrate lyase; Provisional Back     alignment and domain information
>TIGR02320 PEP_mutase phosphoenolpyruvate phosphomutase Back     alignment and domain information
>PF13714 PEP_mutase: Phosphoenolpyruvate phosphomutase; PDB: 1ZLP_A 3EOO_C 1UJQ_D 1O5Q_A 2DUA_A 2HJP_A 2HRW_A 2QIW_A 3KZ2_B 3IH1_B Back     alignment and domain information
>cd00377 ICL_PEPM Members of the ICL/PEPM enzyme family catalyze either P-C or C-C bond formation/cleavage Back     alignment and domain information
>KOG1260 consensus Isocitrate lyase [Energy production and conversion] Back     alignment and domain information
>TIGR01346 isocit_lyase isocitrate lyase Back     alignment and domain information
>COG2224 AceA Isocitrate lyase [Energy production and conversion] Back     alignment and domain information
>PLN02892 isocitrate lyase Back     alignment and domain information
>PF00463 ICL: Isocitrate lyase family; InterPro: IPR000918 Isocitrate lyase (4 Back     alignment and domain information
>cd06556 ICL_KPHMT Members of the ICL/PEPM_KPHMT enzyme superfamily catalyze the formation and cleavage of either P-C or C-C bonds Back     alignment and domain information
>PRK06498 isocitrate lyase; Provisional Back     alignment and domain information
>cd06557 KPHMT-like Ketopantoate hydroxymethyltransferase (KPHMT) is the first enzyme in the pantothenate biosynthesis pathway Back     alignment and domain information
>PRK00311 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed Back     alignment and domain information
>TIGR00222 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase Back     alignment and domain information
>PLN02424 ketopantoate hydroxymethyltransferase Back     alignment and domain information
>PF02548 Pantoate_transf: Ketopantoate hydroxymethyltransferase; InterPro: IPR003700 The panB gene from Escherichia coli encodes the first enzyme of the pantothenate biosynthesis pathway, ketopantoate hydroxymethyltransferase (KPHMT) 2 Back     alignment and domain information
>COG0413 PanB Ketopantoate hydroxymethyltransferase [Coenzyme metabolism] Back     alignment and domain information
>KOG2949 consensus Ketopantoate hydroxymethyltransferase [Coenzyme transport and metabolism] Back     alignment and domain information
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART) Back     alignment and domain information
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea Back     alignment and domain information
>PRK08185 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01859 fruc_bis_ald_ fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist Back     alignment and domain information
>TIGR01037 pyrD_sub1_fam dihydroorotate dehydrogenase (subfamily 1) family protein Back     alignment and domain information
>PRK06801 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01949 AroFGH_arch predicted phospho-2-dehydro-3-deoxyheptonate aldolase Back     alignment and domain information
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA) Back     alignment and domain information
>TIGR00343 pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 Back     alignment and domain information
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>PRK04180 pyridoxal biosynthesis lyase PdxS; Provisional Back     alignment and domain information
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed Back     alignment and domain information
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid) Back     alignment and domain information
>cd04727 pdxS PdxS is a subunit of the pyridoxal 5'-phosphate (PLP) synthase, an important enzyme in deoxyxylulose 5-phosphate (DXP)-independent pathway for de novo biosynthesis of PLP, present in some eubacteria, in archaea, fungi, plants, plasmodia, and some metazoa Back     alignment and domain information
>PRK07998 gatY putative fructose-1,6-bisphosphate aldolase; Reviewed Back     alignment and domain information
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional Back     alignment and domain information
>PRK12738 kbaY tagatose-bisphosphate aldolase; Reviewed Back     alignment and domain information
>cd00947 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases Back     alignment and domain information
>PRK06806 fructose-bisphosphate aldolase; Provisional Back     alignment and domain information
>PRK09195 gatY tagatose-bisphosphate aldolase; Reviewed Back     alignment and domain information
>PRK07315 fructose-bisphosphate aldolase; Provisional Back     alignment and domain information
>PRK12857 fructose-1,6-bisphosphate aldolase; Reviewed Back     alignment and domain information
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Back     alignment and domain information
>cd00945 Aldolase_Class_I Class I aldolases Back     alignment and domain information
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family Back     alignment and domain information
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain Back     alignment and domain information
>PRK12737 gatY tagatose-bisphosphate aldolase; Reviewed Back     alignment and domain information
>TIGR00683 nanA N-acetylneuraminate lyase Back     alignment and domain information
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed Back     alignment and domain information
>PRK13585 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional Back     alignment and domain information
>TIGR00167 cbbA ketose-bisphosphate aldolases Back     alignment and domain information
>PRK04147 N-acetylneuraminate lyase; Provisional Back     alignment and domain information
>cd04732 HisA HisA Back     alignment and domain information
>PRK00748 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated Back     alignment and domain information
>PLN02417 dihydrodipicolinate synthase Back     alignment and domain information
>PRK08610 fructose-bisphosphate aldolase; Reviewed Back     alignment and domain information
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases Back     alignment and domain information
>cd00945 Aldolase_Class_I Class I aldolases Back     alignment and domain information
>TIGR00737 nifR3_yhdG putative TIM-barrel protein, nifR3 family Back     alignment and domain information
>cd00408 DHDPS-like Dihydrodipicolinate synthase family Back     alignment and domain information
>TIGR00674 dapA dihydrodipicolinate synthase Back     alignment and domain information
>TIGR00007 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Back     alignment and domain information
>PRK03170 dihydrodipicolinate synthase; Provisional Back     alignment and domain information
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase Back     alignment and domain information
>TIGR00742 yjbN tRNA dihydrouridine synthase A Back     alignment and domain information
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea Back     alignment and domain information
>cd04731 HisF The cyclase subunit of imidazoleglycerol phosphate synthase (HisF) Back     alignment and domain information
>PRK13399 fructose-1,6-bisphosphate aldolase; Provisional Back     alignment and domain information
>PRK07709 fructose-bisphosphate aldolase; Provisional Back     alignment and domain information
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase Back     alignment and domain information
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis Back     alignment and domain information
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional Back     alignment and domain information
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional Back     alignment and domain information
>cd00331 IGPS Indole-3-glycerol phosphate synthase (IGPS); an enzyme in the tryptophan biosynthetic pathway, catalyzing the ring closure reaction of 1-(o-carboxyphenylamino)-1-deoxyribulose-5-phosphate (CdRP) to indole-3-glycerol phosphate (IGP), accompanied by the release of carbon dioxide and water Back     alignment and domain information
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants Back     alignment and domain information
>PRK05286 dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional Back     alignment and domain information
>PF01116 F_bP_aldolase: Fructose-bisphosphate aldolase class-II; InterPro: IPR000771 Fructose-bisphosphate aldolase [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate Back     alignment and domain information
>PRK07565 dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>PRK00278 trpC indole-3-glycerol-phosphate synthase; Reviewed Back     alignment and domain information
>TIGR03572 WbuZ glycosyl amidation-associated protein WbuZ Back     alignment and domain information
>PRK05835 fructose-bisphosphate aldolase; Provisional Back     alignment and domain information
>TIGR00736 nifR3_rel_arch TIM-barrel protein, putative Back     alignment and domain information
>PRK10415 tRNA-dihydrouridine synthase B; Provisional Back     alignment and domain information
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed Back     alignment and domain information
>cd04739 DHOD_like Dihydroorotate dehydrogenase (DHOD) like proteins Back     alignment and domain information
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain Back     alignment and domain information
>COG0042 tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>CHL00162 thiG thiamin biosynthesis protein G; Validated Back     alignment and domain information
>cd04738 DHOD_2_like Dihydroorotate dehydrogenase (DHOD) class 2 Back     alignment and domain information
>PRK11815 tRNA-dihydrouridine synthase A; Provisional Back     alignment and domain information
>PRK07084 fructose-bisphosphate aldolase; Provisional Back     alignment and domain information
>cd02801 DUS_like_FMN Dihydrouridine synthase-like (DUS-like) FMN-binding domain Back     alignment and domain information
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional Back     alignment and domain information
>PRK10550 tRNA-dihydrouridine synthase C; Provisional Back     alignment and domain information
>TIGR01521 FruBisAldo_II_B fructose-bisphosphate aldolase, class II, Calvin cycle subtype Back     alignment and domain information
>PRK05437 isopentenyl pyrophosphate isomerase; Provisional Back     alignment and domain information
>PRK10128 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional Back     alignment and domain information
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information
>cd02809 alpha_hydroxyacid_oxid_FMN Family of homologous FMN-dependent alpha-hydroxyacid oxidizing enzymes Back     alignment and domain information
>PLN02424 ketopantoate hydroxymethyltransferase Back     alignment and domain information
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences Back     alignment and domain information
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional Back     alignment and domain information
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase Back     alignment and domain information
>cd02940 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>cd00453 FTBP_aldolase_II Fructose/tagarose-bisphosphate aldolase class II Back     alignment and domain information
>PRK02083 imidazole glycerol phosphate synthase subunit HisF; Provisional Back     alignment and domain information
>cd02801 DUS_like_FMN Dihydrouridine synthase-like (DUS-like) FMN-binding domain Back     alignment and domain information
>PRK14024 phosphoribosyl isomerase A; Provisional Back     alignment and domain information
>TIGR00735 hisF imidazoleglycerol phosphate synthase, cyclase subunit Back     alignment and domain information
>cd08205 RuBisCO_IV_RLP Ribulose bisphosphate carboxylase like proteins, Rubisco-Form IV Back     alignment and domain information
>PF01207 Dus: Dihydrouridine synthase (Dus); InterPro: IPR001269 Members of this family catalyse the reduction of the 5,6-double bond of a uridine residue on tRNA Back     alignment and domain information
>PLN03033 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional Back     alignment and domain information
>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain Back     alignment and domain information
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed Back     alignment and domain information
>TIGR02151 IPP_isom_2 isopentenyl-diphosphate delta-isomerase, type 2 Back     alignment and domain information
>PRK09196 fructose-1,6-bisphosphate aldolase; Reviewed Back     alignment and domain information
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain Back     alignment and domain information
>cd02811 IDI-2_FMN Isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 (IDI-2) FMN-binding domain Back     alignment and domain information
>cd08210 RLP_RrRLP Ribulose bisphosphate carboxylase like proteins (RLPs) similar to R Back     alignment and domain information
>cd02940 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>TIGR00262 trpA tryptophan synthase, alpha subunit Back     alignment and domain information
>PRK12331 oxaloacetate decarboxylase; Provisional Back     alignment and domain information
>PRK00208 thiG thiazole synthase; Reviewed Back     alignment and domain information
>cd00564 TMP_TenI Thiamine monophosphate synthase (TMP synthase)/TenI Back     alignment and domain information
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>cd00946 FBP_aldolase_IIA Class II Type A, Fructose-1,6-bisphosphate (FBP) aldolases Back     alignment and domain information
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism Back     alignment and domain information
>PRK09197 fructose-bisphosphate aldolase; Provisional Back     alignment and domain information
>TIGR00222 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase Back     alignment and domain information
>PRK14041 oxaloacetate decarboxylase; Provisional Back     alignment and domain information
>PRK07226 fructose-bisphosphate aldolase; Provisional Back     alignment and domain information
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3 Back     alignment and domain information
>PRK12581 oxaloacetate decarboxylase; Provisional Back     alignment and domain information
>PRK12330 oxaloacetate decarboxylase; Provisional Back     alignment and domain information
>PRK14042 pyruvate carboxylase subunit B; Provisional Back     alignment and domain information
>PRK08318 dihydropyrimidine dehydrogenase subunit B; Validated Back     alignment and domain information
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily Back     alignment and domain information
>TIGR00737 nifR3_yhdG putative TIM-barrel protein, nifR3 family Back     alignment and domain information
>PF02548 Pantoate_transf: Ketopantoate hydroxymethyltransferase; InterPro: IPR003700 The panB gene from Escherichia coli encodes the first enzyme of the pantothenate biosynthesis pathway, ketopantoate hydroxymethyltransferase (KPHMT) 2 Back     alignment and domain information
>PRK10558 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional Back     alignment and domain information
>COG5564 Predicted TIM-barrel enzyme, possibly a dioxygenase [General function prediction only] Back     alignment and domain information
>cd02911 arch_FMN Archeal FMN-binding domain Back     alignment and domain information
>PLN02591 tryptophan synthase Back     alignment and domain information
>PRK00043 thiE thiamine-phosphate pyrophosphorylase; Reviewed Back     alignment and domain information
>PRK08318 dihydropyrimidine dehydrogenase subunit B; Validated Back     alignment and domain information
>PRK04302 triosephosphate isomerase; Provisional Back     alignment and domain information
>cd04741 DHOD_1A_like Dihydroorotate dehydrogenase (DHOD) class 1A FMN-binding domain Back     alignment and domain information
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2 Back     alignment and domain information
>PRK01130 N-acetylmannosamine-6-phosphate 2-epimerase; Provisional Back     alignment and domain information
>cd06557 KPHMT-like Ketopantoate hydroxymethyltransferase (KPHMT) is the first enzyme in the pantothenate biosynthesis pathway Back     alignment and domain information
>PRK12999 pyruvate carboxylase; Reviewed Back     alignment and domain information
>TIGR01037 pyrD_sub1_fam dihydroorotate dehydrogenase (subfamily 1) family protein Back     alignment and domain information
>PRK09282 pyruvate carboxylase subunit B; Validated Back     alignment and domain information
>TIGR01520 FruBisAldo_II_A fructose-bisphosphate aldolase, class II, yeast/E Back     alignment and domain information
>PRK01033 imidazole glycerol phosphate synthase subunit HisF; Provisional Back     alignment and domain information
>PF03932 CutC: CutC family; InterPro: IPR005627 Copper transport in Escherichia coli is mediated by the products of at least six genes, cutA, cutB, cutC, cutD, cutE, and cutF Back     alignment and domain information
>cd04730 NPD_like 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites Back     alignment and domain information
>PRK00311 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed Back     alignment and domain information
>cd04722 TIM_phosphate_binding TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure Back     alignment and domain information
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism Back     alignment and domain information
>TIGR00126 deoC deoxyribose-phosphate aldolase Back     alignment and domain information
>PRK05692 hydroxymethylglutaryl-CoA lyase; Provisional Back     alignment and domain information
>PF01791 DeoC: DeoC/LacD family aldolase; InterPro: IPR002915 This family includes the enzyme deoxyribose-phosphate aldolase, which is involved in nucleotide metabolism Back     alignment and domain information
>cd02931 ER_like_FMN Enoate reductase (ER)-like FMN-binding domain Back     alignment and domain information
>PRK14040 oxaloacetate decarboxylase; Provisional Back     alignment and domain information
>PLN02858 fructose-bisphosphate aldolase Back     alignment and domain information
>TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II Back     alignment and domain information
>TIGR00736 nifR3_rel_arch TIM-barrel protein, putative Back     alignment and domain information
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit Back     alignment and domain information
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain Back     alignment and domain information
>cd04729 NanE N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate Back     alignment and domain information
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [] Back     alignment and domain information
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional Back     alignment and domain information
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2 Back     alignment and domain information
>TIGR03239 GarL 2-dehydro-3-deoxyglucarate aldolase Back     alignment and domain information
>cd06556 ICL_KPHMT Members of the ICL/PEPM_KPHMT enzyme superfamily catalyze the formation and cleavage of either P-C or C-C bonds Back     alignment and domain information
>PF00682 HMGL-like: HMGL-like of this family is not conserved in other members Back     alignment and domain information
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism] Back     alignment and domain information
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences Back     alignment and domain information
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information
>cd02809 alpha_hydroxyacid_oxid_FMN Family of homologous FMN-dependent alpha-hydroxyacid oxidizing enzymes Back     alignment and domain information
>PRK15452 putative protease; Provisional Back     alignment and domain information
>cd02933 OYE_like_FMN Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information
>cd04723 HisA_HisF Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase (HisA) and the cyclase subunit of imidazoleglycerol phosphate synthase (HisF) Back     alignment and domain information
>TIGR01163 rpe ribulose-phosphate 3-epimerase Back     alignment and domain information
>PRK11572 copper homeostasis protein CutC; Provisional Back     alignment and domain information
>PRK05848 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>cd00959 DeoC 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family Back     alignment and domain information
>cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily Back     alignment and domain information
>TIGR00693 thiE thiamine-phosphate pyrophosphorylase Back     alignment and domain information
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional Back     alignment and domain information
>cd04739 DHOD_like Dihydroorotate dehydrogenase (DHOD) like proteins Back     alignment and domain information
>TIGR01740 pyrF orotidine 5'-phosphate decarboxylase, subfamily 1 Back     alignment and domain information
>PRK00208 thiG thiazole synthase; Reviewed Back     alignment and domain information
>PRK06852 aldolase; Validated Back     alignment and domain information
>cd02911 arch_FMN Archeal FMN-binding domain Back     alignment and domain information
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily Back     alignment and domain information
>PRK09250 fructose-bisphosphate aldolase; Provisional Back     alignment and domain information
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic Back     alignment and domain information
>PRK06512 thiamine-phosphate pyrophosphorylase; Provisional Back     alignment and domain information
>PRK09490 metH B12-dependent methionine synthase; Provisional Back     alignment and domain information
>TIGR01304 IMP_DH_rel_2 IMP dehydrogenase family protein Back     alignment and domain information
>cd04735 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 4 Back     alignment and domain information
>PRK07695 transcriptional regulator TenI; Provisional Back     alignment and domain information
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2335 consensus tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05286 dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>PRK14017 galactonate dehydratase; Provisional Back     alignment and domain information
>cd07937 DRE_TIM_PC_TC_5S Pyruvate carboxylase and Transcarboxylase 5S, carboxyltransferase domain Back     alignment and domain information
>cd03321 mandelate_racemase Mandelate racemase (MR) catalyzes the Mg2+-dependent 1,1-proton transfer reaction that interconverts the enantiomers of mandelic acid Back     alignment and domain information
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase Back     alignment and domain information
>PRK05692 hydroxymethylglutaryl-CoA lyase; Provisional Back     alignment and domain information
>TIGR02311 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Back     alignment and domain information
>PRK08649 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>COG2513 PrpB PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [] Back     alignment and domain information
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>PRK07565 dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional Back     alignment and domain information
>PRK10415 tRNA-dihydrouridine synthase B; Provisional Back     alignment and domain information
>PLN02746 hydroxymethylglutaryl-CoA lyase Back     alignment and domain information
>TIGR01769 GGGP geranylgeranylglyceryl phosphate synthase Back     alignment and domain information
>PRK08195 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated Back     alignment and domain information
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd04741 DHOD_1A_like Dihydroorotate dehydrogenase (DHOD) class 1A FMN-binding domain Back     alignment and domain information
>PRK11858 aksA trans-homoaconitate synthase; Reviewed Back     alignment and domain information
>COG0434 SgcQ Predicted TIM-barrel enzyme [General function prediction only] Back     alignment and domain information
>COG0413 PanB Ketopantoate hydroxymethyltransferase [Coenzyme metabolism] Back     alignment and domain information
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>TIGR02082 metH 5-methyltetrahydrofolate--homocysteine methyltransferase Back     alignment and domain information
>PF03932 CutC: CutC family; InterPro: IPR005627 Copper transport in Escherichia coli is mediated by the products of at least six genes, cutA, cutB, cutC, cutD, cutE, and cutF Back     alignment and domain information
>PF03437 BtpA: BtpA family; InterPro: IPR005137 Photosystem I (PSI) is a large protein complex embedded within the photosynthetic thylakoid membrane Back     alignment and domain information
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional Back     alignment and domain information
>cd04729 NanE N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate Back     alignment and domain information
>PRK11613 folP dihydropteroate synthase; Provisional Back     alignment and domain information
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase Back     alignment and domain information
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2 Back     alignment and domain information
>PRK13523 NADPH dehydrogenase NamA; Provisional Back     alignment and domain information
>PRK01130 N-acetylmannosamine-6-phosphate 2-epimerase; Provisional Back     alignment and domain information
>PF02581 TMP-TENI: Thiamine monophosphate synthase/TENI; InterPro: IPR003733 Thiamine monophosphate synthase (TMP) (2 Back     alignment and domain information
>PRK07028 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator; Validated Back     alignment and domain information
>PRK02615 thiamine-phosphate pyrophosphorylase; Provisional Back     alignment and domain information
>PRK11572 copper homeostasis protein CutC; Provisional Back     alignment and domain information
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA) Back     alignment and domain information
>cd03329 MR_like_4 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 4 Back     alignment and domain information
>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed Back     alignment and domain information
>PRK13523 NADPH dehydrogenase NamA; Provisional Back     alignment and domain information
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll Back     alignment and domain information
>TIGR01306 GMP_reduct_2 guanosine monophosphate reductase, bacterial Back     alignment and domain information
>PLN02495 oxidoreductase, acting on the CH-CH group of donors Back     alignment and domain information
>PLN02274 inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>TIGR02151 IPP_isom_2 isopentenyl-diphosphate delta-isomerase, type 2 Back     alignment and domain information
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism] Back     alignment and domain information
>cd04725 OMP_decarboxylase_like Orotidine 5'-phosphate decarboxylase (ODCase) is a dimeric enzyme that decarboxylates orotidine 5'-monophosphate (OMP) to form uridine 5'-phosphate (UMP), an essential step in the pyrimidine biosynthetic pathway Back     alignment and domain information
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>cd03325 D-galactonate_dehydratase D-galactonate dehydratase catalyses the dehydration of galactonate to 2-keto-3-deoxygalactnate (KDGal), as part of the D-galactonate nonphosphorolytic catabolic Entner-Doudoroff pathway Back     alignment and domain information
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase Back     alignment and domain information
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein Back     alignment and domain information
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain Back     alignment and domain information
>TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II Back     alignment and domain information
>cd07945 DRE_TIM_CMS Leptospira interrogans citramalate synthase (CMS) and related proteins, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>cd04737 LOX_like_FMN L-Lactate oxidase (LOX) FMN-binding domain Back     alignment and domain information
>cd07948 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate synthase and related proteins, catalytic TIM barrel domain Back     alignment and domain information
>PF13714 PEP_mutase: Phosphoenolpyruvate phosphomutase; PDB: 1ZLP_A 3EOO_C 1UJQ_D 1O5Q_A 2DUA_A 2HJP_A 2HRW_A 2QIW_A 3KZ2_B 3IH1_B Back     alignment and domain information
>PF01207 Dus: Dihydrouridine synthase (Dus); InterPro: IPR001269 Members of this family catalyse the reduction of the 5,6-double bond of a uridine residue on tRNA Back     alignment and domain information
>TIGR00035 asp_race aspartate racemase Back     alignment and domain information
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain Back     alignment and domain information
>TIGR02127 pyrF_sub2 orotidine 5'-phosphate decarboxylase, subfamily 2 Back     alignment and domain information
>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain Back     alignment and domain information
>cd04747 OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 5 Back     alignment and domain information
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>TIGR02660 nifV_homocitr homocitrate synthase NifV Back     alignment and domain information
>KOG1260 consensus Isocitrate lyase [Energy production and conversion] Back     alignment and domain information
>cd03327 MR_like_2 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 2 Back     alignment and domain information
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2 Back     alignment and domain information
>PRK09485 mmuM homocysteine methyltransferase; Provisional Back     alignment and domain information
>PRK08385 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>TIGR00259 thylakoid_BtpA membrane complex biogenesis protein, BtpA family Back     alignment and domain information
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>PRK06096 molybdenum transport protein ModD; Provisional Back     alignment and domain information
>cd04738 DHOD_2_like Dihydroorotate dehydrogenase (DHOD) class 2 Back     alignment and domain information
>PLN02746 hydroxymethylglutaryl-CoA lyase Back     alignment and domain information
>PRK06559 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional Back     alignment and domain information
>cd03332 LMO_FMN L-Lactate 2-monooxygenase (LMO) FMN-binding domain Back     alignment and domain information
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional Back     alignment and domain information
>cd02811 IDI-2_FMN Isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 (IDI-2) FMN-binding domain Back     alignment and domain information
>PRK10550 tRNA-dihydrouridine synthase C; Provisional Back     alignment and domain information
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase Back     alignment and domain information
>COG0157 NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism] Back     alignment and domain information
>cd03323 D-glucarate_dehydratase D-Glucarate dehydratase (GlucD) catalyzes the dehydration of both D-glucarate and L-idarate to form 5-keto-4-deoxy-D-glucarate (5-KDG) , the initial reaction of the catabolic pathway for (D)-glucarate Back     alignment and domain information
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA) Back     alignment and domain information
>PRK08227 autoinducer 2 aldolase; Validated Back     alignment and domain information
>cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides Back     alignment and domain information
>COG3836 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd07943 DRE_TIM_HOA 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase Back     alignment and domain information
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism] Back     alignment and domain information
>cd07941 DRE_TIM_LeuA3 Desulfobacterium autotrophicum LeuA3 and related proteins, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK11858 aksA trans-homoaconitate synthase; Reviewed Back     alignment and domain information
>TIGR01496 DHPS dihydropteroate synthase Back     alignment and domain information
>TIGR03247 glucar-dehydr glucarate dehydratase Back     alignment and domain information
>PRK09389 (R)-citramalate synthase; Provisional Back     alignment and domain information
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein Back     alignment and domain information
>cd03328 MR_like_3 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 3 Back     alignment and domain information
>TIGR02708 L_lactate_ox L-lactate oxidase Back     alignment and domain information
>TIGR03217 4OH_2_O_val_ald 4-hydroxy-2-oxovalerate aldolase Back     alignment and domain information
>cd03326 MR_like_1 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 1 Back     alignment and domain information
>cd00331 IGPS Indole-3-glycerol phosphate synthase (IGPS); an enzyme in the tryptophan biosynthetic pathway, catalyzing the ring closure reaction of 1-(o-carboxyphenylamino)-1-deoxyribulose-5-phosphate (CdRP) to indole-3-glycerol phosphate (IGP), accompanied by the release of carbon dioxide and water Back     alignment and domain information
>PRK08195 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated Back     alignment and domain information
>PRK15452 putative protease; Provisional Back     alignment and domain information
>TIGR00742 yjbN tRNA dihydrouridine synthase A Back     alignment and domain information
>cd07948 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate synthase and related proteins, catalytic TIM barrel domain Back     alignment and domain information
>cd04730 NPD_like 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites Back     alignment and domain information
>PRK07107 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>PRK06978 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PLN02334 ribulose-phosphate 3-epimerase Back     alignment and domain information
>PRK05848 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PRK10605 N-ethylmaleimide reductase; Provisional Back     alignment and domain information
>TIGR01334 modD putative molybdenum utilization protein ModD Back     alignment and domain information
>PRK15052 D-tagatose-1,6-bisphosphate aldolase subunit GatZ; Provisional Back     alignment and domain information
>PRK05458 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>TIGR03217 4OH_2_O_val_ald 4-hydroxy-2-oxovalerate aldolase Back     alignment and domain information
>PLN02489 homocysteine S-methyltransferase Back     alignment and domain information
>PLN02535 glycolate oxidase Back     alignment and domain information
>PRK10128 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional Back     alignment and domain information
>cd00564 TMP_TenI Thiamine monophosphate synthase (TMP synthase)/TenI Back     alignment and domain information
>PRK15458 tagatose 6-phosphate aldolase subunit KbaZ; Provisional Back     alignment and domain information
>TIGR03239 GarL 2-dehydro-3-deoxyglucarate aldolase Back     alignment and domain information
>TIGR02660 nifV_homocitr homocitrate synthase NifV Back     alignment and domain information
>TIGR02320 PEP_mutase phosphoenolpyruvate phosphomutase Back     alignment and domain information
>PRK06543 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PRK00125 pyrF orotidine 5'-phosphate decarboxylase; Reviewed Back     alignment and domain information
>PLN03228 methylthioalkylmalate synthase; Provisional Back     alignment and domain information
>PRK10558 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional Back     alignment and domain information
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>TIGR02311 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Back     alignment and domain information
>TIGR03849 arch_ComA phosphosulfolactate synthase Back     alignment and domain information
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03328 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family; InterPro: IPR005000 This family includes 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (4 Back     alignment and domain information
>PLN02274 inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>cd02922 FCB2_FMN Flavocytochrome b2 (FCB2) FMN-binding domain Back     alignment and domain information
>cd02933 OYE_like_FMN Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information
>PRK11197 lldD L-lactate dehydrogenase; Provisional Back     alignment and domain information
>TIGR01334 modD putative molybdenum utilization protein ModD Back     alignment and domain information
>PRK02506 dihydroorotate dehydrogenase 1A; Reviewed Back     alignment and domain information
>PRK08649 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>PRK00507 deoxyribose-phosphate aldolase; Provisional Back     alignment and domain information
>PRK05437 isopentenyl pyrophosphate isomerase; Provisional Back     alignment and domain information
>TIGR02090 LEU1_arch isopropylmalate/citramalate/homocitrate synthases Back     alignment and domain information
>CHL00162 thiG thiamin biosynthesis protein G; Validated Back     alignment and domain information
>PRK07896 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>COG0269 SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01235 pyruv_carbox pyruvate carboxylase Back     alignment and domain information
>COG1794 RacX Aspartate racemase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd03322 rpsA The starvation sensing protein RpsA from E Back     alignment and domain information
>PRK02714 O-succinylbenzoate synthase; Provisional Back     alignment and domain information
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed Back     alignment and domain information
>TIGR02708 L_lactate_ox L-lactate oxidase Back     alignment and domain information
>TIGR01304 IMP_DH_rel_2 IMP dehydrogenase family protein Back     alignment and domain information
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway [] Back     alignment and domain information
>PRK05458 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1 Back     alignment and domain information
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4 Back     alignment and domain information
>PRK05105 O-succinylbenzoate synthase; Provisional Back     alignment and domain information
>PRK06106 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS) Back     alignment and domain information
>cd00452 KDPG_aldolase KDPG and KHG aldolase Back     alignment and domain information
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed Back     alignment and domain information
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>cd03324 rTSbeta_L-fuconate_dehydratase Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA Back     alignment and domain information
>cd04732 HisA HisA Back     alignment and domain information
>PRK05742 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PLN02495 oxidoreductase, acting on the CH-CH group of donors Back     alignment and domain information
>PRK05581 ribulose-phosphate 3-epimerase; Validated Back     alignment and domain information
>PLN02716 nicotinate-nucleotide diphosphorylase (carboxylating) Back     alignment and domain information
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3 Back     alignment and domain information
>PRK12858 tagatose 1,6-diphosphate aldolase; Reviewed Back     alignment and domain information
>PRK11815 tRNA-dihydrouridine synthase A; Provisional Back     alignment and domain information
>PRK07534 methionine synthase I; Validated Back     alignment and domain information
>cd02929 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) and histamine dehydrogenase (HD) FMN-binding domain Back     alignment and domain information
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional Back     alignment and domain information
>PRK09016 quinolinate phosphoribosyltransferase; Validated Back     alignment and domain information
>cd02812 PcrB_like PcrB_like proteins Back     alignment and domain information
>PRK13753 dihydropteroate synthase; Provisional Back     alignment and domain information
>PRK00915 2-isopropylmalate synthase; Validated Back     alignment and domain information
>PRK03512 thiamine-phosphate pyrophosphorylase; Provisional Back     alignment and domain information
>PLN02979 glycolate oxidase Back     alignment and domain information
>cd02931 ER_like_FMN Enoate reductase (ER)-like FMN-binding domain Back     alignment and domain information
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional Back     alignment and domain information
>COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily [Cell envelope biogenesis, outer membrane / General function prediction only] Back     alignment and domain information
>PF03060 NMO: Nitronate monooxygenase; InterPro: IPR004136 2-Nitropropane dioxygenase (1 Back     alignment and domain information
>COG0821 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Lipid metabolism] Back     alignment and domain information
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase Back     alignment and domain information
>PRK13957 indole-3-glycerol-phosphate synthase; Provisional Back     alignment and domain information
>PF01070 FMN_dh: FMN-dependent dehydrogenase; InterPro: IPR000262 A number of oxidoreductases that act on alpha-hydroxy acids and which are FMN-containing flavoproteins have been shown [, , ] to be structurally related Back     alignment and domain information
>PRK10605 N-ethylmaleimide reductase; Provisional Back     alignment and domain information
>PRK00915 2-isopropylmalate synthase; Validated Back     alignment and domain information
>cd04737 LOX_like_FMN L-Lactate oxidase (LOX) FMN-binding domain Back     alignment and domain information
>PRK08999 hypothetical protein; Provisional Back     alignment and domain information
>PF00977 His_biosynth: Histidine biosynthesis protein; InterPro: IPR006062 Histidine is formed by several complex and distinct biochemical reactions catalysed by eight enzymes Back     alignment and domain information
>cd02922 FCB2_FMN Flavocytochrome b2 (FCB2) FMN-binding domain Back     alignment and domain information
>PRK00366 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Reviewed Back     alignment and domain information
>TIGR00973 leuA_bact 2-isopropylmalate synthase, bacterial type Back     alignment and domain information
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional Back     alignment and domain information
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily Back     alignment and domain information
>cd08207 RLP_NonPhot Ribulose bisphosphate carboxylase like proteins from nonphototrophic bacteria Back     alignment and domain information
>PLN03228 methylthioalkylmalate synthase; Provisional Back     alignment and domain information
>PLN02493 probable peroxisomal (S)-2-hydroxy-acid oxidase Back     alignment and domain information
>PRK07896 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional Back     alignment and domain information
>PRK00230 orotidine 5'-phosphate decarboxylase; Reviewed Back     alignment and domain information
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed Back     alignment and domain information
>cd03318 MLE Muconate Lactonizing Enzyme (MLE), an homooctameric enzyme, catalyses the conversion of cis,cis-muconate (CCM) to muconolactone (ML) in the catechol branch of the beta-ketoadipate pathway Back     alignment and domain information
>cd00739 DHPS DHPS subgroup of Pterin binding enzymes Back     alignment and domain information
>PRK08645 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; Reviewed Back     alignment and domain information
>PRK07534 methionine synthase I; Validated Back     alignment and domain information
>PF02679 ComA: (2R)-phospho-3-sulfolactate synthase (ComA); InterPro: IPR003830 Methanogenic archaea produce methane via the anaerobic reduction of acetate or single carbon compounds [] Back     alignment and domain information
>TIGR02810 agaZ_gatZ D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit Back     alignment and domain information
>PRK07107 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>TIGR02090 LEU1_arch isopropylmalate/citramalate/homocitrate synthases Back     alignment and domain information
>TIGR03586 PseI pseudaminic acid synthase Back     alignment and domain information
>cd04722 TIM_phosphate_binding TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure Back     alignment and domain information
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism] Back     alignment and domain information
>cd08209 RLP_DK-MTP-1-P-enolase 2,3-diketo-5-methylthiopentyl-1-phosphate enolase Back     alignment and domain information
>cd08213 RuBisCO_large_III Ribulose bisphosphate carboxylase large chain, Form III Back     alignment and domain information
>PLN02321 2-isopropylmalate synthase Back     alignment and domain information
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>cd07940 DRE_TIM_IPMS 2-isopropylmalate synthase (IPMS), N-terminal catalytic TIM barrel domain Back     alignment and domain information
>TIGR01927 menC_gamma/gm+ o-succinylbenzoic acid (OSB) synthetase Back     alignment and domain information
>PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase Back     alignment and domain information
>COG0646 MetH Methionine synthase I (cobalamin-dependent), methyltransferase domain [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02321 2-isopropylmalate synthase Back     alignment and domain information
>PRK09283 delta-aminolevulinic acid dehydratase; Validated Back     alignment and domain information
>COG0269 SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK05500 bifunctional orotidine 5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Validated Back     alignment and domain information
>cd04735 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 4 Back     alignment and domain information
>cd00377 ICL_PEPM Members of the ICL/PEPM enzyme family catalyze either P-C or C-C bond formation/cleavage Back     alignment and domain information
>PF01680 SOR_SNZ: SOR/SNZ family; InterPro: IPR001852 Snz1p is a highly conserved protein involved in growth arrest in Saccharomyces cerevisiae (Baker's yeast) [] Back     alignment and domain information
>cd08148 RuBisCO_large Ribulose bisphosphate carboxylase large chain Back     alignment and domain information
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase Back     alignment and domain information
>PRK00278 trpC indole-3-glycerol-phosphate synthase; Reviewed Back     alignment and domain information
>TIGR00973 leuA_bact 2-isopropylmalate synthase, bacterial type Back     alignment and domain information
>cd07938 DRE_TIM_HMGL 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain Back     alignment and domain information
>PLN02826 dihydroorotate dehydrogenase Back     alignment and domain information
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism] Back     alignment and domain information
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll Back     alignment and domain information
>PRK10200 putative racemase; Provisional Back     alignment and domain information
>PRK07695 transcriptional regulator TenI; Provisional Back     alignment and domain information
>COG0167 PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK00043 thiE thiamine-phosphate pyrophosphorylase; Reviewed Back     alignment and domain information
>TIGR01306 GMP_reduct_2 guanosine monophosphate reductase, bacterial Back     alignment and domain information
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase Back     alignment and domain information
>PRK08508 biotin synthase; Provisional Back     alignment and domain information
>PF01180 DHO_dh: Dihydroorotate dehydrogenase; InterPro: IPR012135 Dihydroorotate dehydrogenase (DHOD), also known as dihydroorotate oxidase, catalyses the fourth step in de novo pyrimidine biosynthesis, the stereospecific oxidation of (S)-dihydroorotate to orotate, which is the only redox reaction in this pathway Back     alignment and domain information
>KOG1606 consensus Stationary phase-induced protein, SOR/SNZ family [Coenzyme transport and metabolism] Back     alignment and domain information
>PRK09389 (R)-citramalate synthase; Provisional Back     alignment and domain information
>PLN02591 tryptophan synthase Back     alignment and domain information
>TIGR03326 rubisco_III ribulose bisphosphate carboxylase, type III Back     alignment and domain information
>PRK04452 acetyl-CoA decarbonylase/synthase complex subunit delta; Provisional Back     alignment and domain information
>PRK01033 imidazole glycerol phosphate synthase subunit HisF; Provisional Back     alignment and domain information
>PRK06256 biotin synthase; Validated Back     alignment and domain information
>PRK12858 tagatose 1,6-diphosphate aldolase; Reviewed Back     alignment and domain information
>PRK02901 O-succinylbenzoate synthase; Provisional Back     alignment and domain information
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding Back     alignment and domain information
>PRK08072 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>TIGR02317 prpB methylisocitrate lyase Back     alignment and domain information
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic Back     alignment and domain information
>TIGR01949 AroFGH_arch predicted phospho-2-dehydro-3-deoxyheptonate aldolase Back     alignment and domain information
>COG0434 SgcQ Predicted TIM-barrel enzyme [General function prediction only] Back     alignment and domain information
>TIGR02082 metH 5-methyltetrahydrofolate--homocysteine methyltransferase Back     alignment and domain information
>PRK07428 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE) Back     alignment and domain information
>PRK11320 prpB 2-methylisocitrate lyase; Provisional Back     alignment and domain information
>COG0119 LeuA Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism] Back     alignment and domain information
>cd07940 DRE_TIM_IPMS 2-isopropylmalate synthase (IPMS), N-terminal catalytic TIM barrel domain Back     alignment and domain information
>cd07939 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and related proteins, catalytic TIM barrel domain Back     alignment and domain information
>cd08209 RLP_DK-MTP-1-P-enolase 2,3-diketo-5-methylthiopentyl-1-phosphate enolase Back     alignment and domain information
>cd07938 DRE_TIM_HMGL 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain Back     alignment and domain information
>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism] Back     alignment and domain information
>cd03320 OSBS o-Succinylbenzoate synthase (OSBS) catalyzes the conversion of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 4-(2'-carboxyphenyl)-4-oxobutyrate (o-succinylbenzoate or OSB), a reaction in the menaquinone biosynthetic pathway Back     alignment and domain information
>TIGR03332 salvage_mtnW 2,3-diketo-5-methylthiopentyl-1-phosphate enolase Back     alignment and domain information
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS) Back     alignment and domain information
>cd00959 DeoC 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family Back     alignment and domain information
>PRK15072 bifunctional D-altronate/D-mannonate dehydratase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query462
1zlp_A318 Petal Death Protein Psr132 With Cysteine-Linked Glu 1e-40
3fa3_A302 Crystal Structure Of 2,3-Dimethylmalate Lyase, A Pe 3e-39
4iqd_A305 Crystal Structure Of Carboxyvinyl-carboxyphosphonat 1e-36
3lye_A307 Crystal Structure Of Oxaloacetate Acetylhydrolase L 4e-35
1mum_A295 Structure Of The 2-Methylisocitrate Lyase (Prpb) Fr 2e-33
1ujq_A305 Crystal Structure Of 2-Methylisocitrate Lyase (Prpb 5e-33
1xg3_A295 Crystal Structure Of The C123s 2-Methylisocitrate L 3e-32
3eoo_A298 2.9a Crystal Structure Of Methyl-Isocitrate Lyase F 6e-27
3b8i_A287 Crystal Structure Of Oxaloacetate Decarboxylase Fro 4e-19
2dua_A290 Crystal Structure Of Phosphonopyruvate Hydrolase Co 2e-16
1m1b_A295 Crystal Structure Of Phosphoenolpyruvate Mutase Com 4e-15
1pym_A295 Phosphoenolpyruvate Mutase From Mollusk In With Bou 2e-14
1s2u_A295 Crystal Structure Of The D58a Phosphoenolpyruvate M 4e-14
2ze3_A275 Crystal Structure Of Dfa0005 Complexed With Alpha-K 7e-12
3i4e_A439 Crystal Structure Of Isocitrate Lyase From Burkhold 1e-10
3eol_A433 2.0a Crystal Structure Of Isocitrate Lyase From Bru 5e-10
1igw_A434 Crystal Structure Of The Isocitrate Lyase From The 9e-10
3e5b_A433 2.4 A Crystal Structure Of Isocitrate Lyase From Br 1e-09
3lg3_A435 1.4a Crystal Structure Of Isocitrate Lyase From Yer 1e-09
1f61_A429 Crystal Structure Of Isocitrate Lyase From Mycobact 5e-09
1dqu_A538 Crystal Structure Of The Isocitrate Lyase From Aspe 7e-09
1f8i_A429 Crystal Structure Of Isocitrate Lyase:nitropropiona 1e-07
2qiw_A255 Crystal Structure Of A Putative Phosphoenolpyruvate 2e-05
>pdb|1ZLP|A Chain A, Petal Death Protein Psr132 With Cysteine-Linked Glutaraldehyde Forming A Thiohemiacetal Adduct Length = 318 Back     alignment and structure 
Iteration: 1

 Score =  164 bits (415), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 165/287 (57%), Gaps = 11/287 (3%)
Query: 80  SLRQILELPGVHQGPACFDALSAKLVEKXXXXXXXXXXXXXXAARLALPDTGFISYGEMV 139
           ++ +++E  G    P   DALSA +VEK              AA L LPD G ++  E+V
Sbjct: 30  TMHRLIEEHGSVLMPGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVV 89
Query: 140 DQGQLITQAV-SIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRG 198
           +  + IT A  ++ V+ DGD G G  +NV+R ++  I AG  G+ LEDQV PK CGH RG
Sbjct: 90  EATRRITAAAPNLCVVVDGDTGGGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRG 149
Query: 199 RKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGADVLF 258
           + VV  EE  ++I AA +A  +  SD  +VARTD+R    LEE +RR+  + +AGAD  F
Sbjct: 150 KAVVPAEEHALKIAAAREAIGD--SDFFLVARTDARAPHGLEEGIRRANLYKEAGADATF 207
Query: 259 IDALASKEEMKAFCEISPLVP--KMANMLEGGGKTPILNPLELEELGFKLVAYPLSLIGV 316
           ++A A+ +E+K   E+S      ++ANM+E GGKTP+  P E +E+GF L+A+ L+ +  
Sbjct: 208 VEAPANVDELK---EVSAKTKGLRIANMIE-GGKTPLHTPEEFKEMGFHLIAHSLTAVYA 263
Query: 317 SVRAMQDALTAI--KGGRIPSPGSMPSFQEIKETLGFNTYYEEEKRY 361
           + RA+ + +  +  KG        M +F E  E +   ++YE E ++
Sbjct: 264 TARALVNIMKILKEKGTTRDDLDQMATFSEFNELISLESWYEMESKF 310
>pdb|3FA3|A Chain A, Crystal Structure Of 2,3-Dimethylmalate Lyase, A Pep MutaseISOCITRATE Lyase Superfamily Member, Trigonal Crystal Form Length = 302 Back     alignment and structure
>pdb|4IQD|A Chain A, Crystal Structure Of Carboxyvinyl-carboxyphosphonate Phosphorylmutase From Bacillus Anthracis Length = 305 Back     alignment and structure
>pdb|3LYE|A Chain A, Crystal Structure Of Oxaloacetate Acetylhydrolase Length = 307 Back     alignment and structure
>pdb|1MUM|A Chain A, Structure Of The 2-Methylisocitrate Lyase (Prpb) From Escherichia Coli Length = 295 Back     alignment and structure
>pdb|1UJQ|A Chain A, Crystal Structure Of 2-Methylisocitrate Lyase (Prpb) From Salmonella Enterica Serovar Typhimurium Length = 305 Back     alignment and structure
>pdb|1XG3|A Chain A, Crystal Structure Of The C123s 2-Methylisocitrate Lyase Mutant From Escherichia Coli In Complex With The Reaction Product, Mg(Ii)-Pyruvate And Succinate Length = 295 Back     alignment and structure
>pdb|3EOO|A Chain A, 2.9a Crystal Structure Of Methyl-Isocitrate Lyase From Burkholderia Pseudomallei Length = 298 Back     alignment and structure
>pdb|3B8I|A Chain A, Crystal Structure Of Oxaloacetate Decarboxylase From Pseudomonas Aeruginosa (Pa4872) In Complex With Oxalate And Mg2+. Length = 287 Back     alignment and structure
>pdb|2DUA|A Chain A, Crystal Structure Of Phosphonopyruvate Hydrolase Complex With Oxalate And Mg++ Length = 290 Back     alignment and structure
>pdb|1M1B|A Chain A, Crystal Structure Of Phosphoenolpyruvate Mutase Complexed With Sulfopyruvate Length = 295 Back     alignment and structure
>pdb|1PYM|A Chain A, Phosphoenolpyruvate Mutase From Mollusk In With Bound Mg2-oxalate Length = 295 Back     alignment and structure
>pdb|1S2U|A Chain A, Crystal Structure Of The D58a Phosphoenolpyruvate Mutase Mutant Protein Length = 295 Back     alignment and structure
>pdb|2ZE3|A Chain A, Crystal Structure Of Dfa0005 Complexed With Alpha-Ketoglutarate: A Novel Member Of The IclPEPM SUPERFAMILY FROM ALKALI-Tolerant Deinococcus Ficus Length = 275 Back     alignment and structure
>pdb|3I4E|A Chain A, Crystal Structure Of Isocitrate Lyase From Burkholderia Pseudomallei Length = 439 Back     alignment and structure
>pdb|3EOL|A Chain A, 2.0a Crystal Structure Of Isocitrate Lyase From Brucella Melitensis (P43212) Length = 433 Back     alignment and structure
>pdb|1IGW|A Chain A, Crystal Structure Of The Isocitrate Lyase From The A219c Mutant Of Escherichia Coli Length = 434 Back     alignment and structure
>pdb|3E5B|A Chain A, 2.4 A Crystal Structure Of Isocitrate Lyase From Brucella Melitensis Length = 433 Back     alignment and structure
>pdb|3LG3|A Chain A, 1.4a Crystal Structure Of Isocitrate Lyase From Yersinia Pestis Co92 Length = 435 Back     alignment and structure
>pdb|1F61|A Chain A, Crystal Structure Of Isocitrate Lyase From Mycobacterium Tuberculosis Length = 429 Back     alignment and structure
>pdb|1DQU|A Chain A, Crystal Structure Of The Isocitrate Lyase From Aspergillus Nidulans Length = 538 Back     alignment and structure
>pdb|1F8I|A Chain A, Crystal Structure Of Isocitrate Lyase:nitropropionate:glyoxylate Complex From Mycobacterium Tuberculosis Length = 429 Back     alignment and structure
>pdb|2QIW|A Chain A, Crystal Structure Of A Putative Phosphoenolpyruvate Phosphonomutase (ncgl1015, Cgl1060) From Corynebacterium Glutamicum Atcc 13032 At 1.80 A Resolution Length = 255 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query462
3fa4_A302 2,3-dimethylmalate lyase; alpha/beta barrel, helix 1e-140
1zlp_A318 PSR132, petal death protein; TIM-barrel, helix swa 1e-138
3lye_A307 Oxaloacetate acetyl hydrolase; (alpha/beta)8 barre 1e-136
3eoo_A298 Methylisocitrate lyase; seattle structural genomic 1e-135
3ih1_A305 Methylisocitrate lyase; alpha-beta structure, TIM- 1e-133
1xg4_A295 Probable methylisocitrate lyase; 2-methylisocitrat 1e-133
3b8i_A287 PA4872 oxaloacetate decarboxylase; alpha/beta barr 1e-126
1s2w_A295 Phosphoenolpyruvate phosphomutase; phosphonopyruva 1e-124
2hjp_A290 Phosphonopyruvate hydrolase; phosporus-Ca cleavage 1e-121
2ze3_A275 DFA0005; organic waste LEFT-OVER decomposition, al 2e-91
2qiw_A255 PEP phosphonomutase; structural genomics, joint ce 5e-83
3i4e_A439 Isocitrate lyase; structural genomics, seattle str 6e-30
1f8m_A429 Isocitrate lyase, ICL; alpha-beta barrel, helix-sw 7e-30
3eol_A433 Isocitrate lyase; seattle structural center for in 1e-29
1dqu_A538 Isocitrate lyase; beta barrel; 2.80A {Emericella n 4e-26
3lg3_A435 Isocitrate lyase; conserved, CD, proteomics eviden 6e-26
2p10_A286 MLL9387 protein; putative phosphonopyruvate hydrol 6e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A Length = 302 Back     alignment and structure
 Score =  402 bits (1034), Expect = e-140
 Identities = 101/291 (34%), Positives = 159/291 (54%), Gaps = 3/291 (1%)

Query: 76  SPAKSLRQILELPG-VHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFIS 134
           + A SLR+ LE P      P  +D LSA++   +GF   + +G   +A+     D G  +
Sbjct: 4   TAATSLRRALENPDSFIVAPGVYDGLSARVALSAGFDALYMTGAGTAASVHGQADLGICT 63

Query: 135 YGEMVDQGQLITQA-VSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGC 193
             +M    ++I+    S PVI D D GYG  + V RT + Y ++G A   +EDQV  K C
Sbjct: 64  LNDMRANAEMISNISPSTPVIADADTGYGGPIMVARTTEQYSRSGVAAFHIEDQVQTKRC 123

Query: 194 GHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAG 253
           GH  G+ +V  +  V RI+AAV AR+  GSDIV++ARTDS Q    EES+ R RA  DAG
Sbjct: 124 GHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVARLRAARDAG 183

Query: 254 ADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSL 313
           ADV F++ + S+E  +   +     P + NM+E  G TP ++  E +E+GF+++ +P + 
Sbjct: 184 ADVGFLEGITSREMARQVIQDLAGWPLLLNMVE-HGATPSISAAEAKEMGFRIIIFPFAA 242

Query: 314 IGVSVRAMQDALTAIKGGRIPSPGSMPSFQEIKETLGFNTYYEEEKRYATS 364
           +G +V AM++A+  +K   IP      + Q +    G +   + + +   +
Sbjct: 243 LGPAVAAMREAMEKLKRDGIPGLDKEMTPQMLFRVCGLDESMKVDAQAGGA 293
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus} Length = 318 Back     alignment and structure
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A Length = 307 Back     alignment and structure
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} Length = 298 Back     alignment and structure
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A Length = 295 Back     alignment and structure
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa} Length = 287 Back     alignment and structure
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A Length = 295 Back     alignment and structure
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A Length = 290 Back     alignment and structure
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus} Length = 275 Back     alignment and structure
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032} Length = 255 Back     alignment and structure
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei} Length = 439 Back     alignment and structure
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A Length = 429 Back     alignment and structure
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A* Length = 433 Back     alignment and structure
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7 Length = 538 Back     alignment and structure
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} PDB: 1igw_A Length = 435 Back     alignment and structure
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9 Length = 286 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query462
3eoo_A298 Methylisocitrate lyase; seattle structural genomic 100.0
3fa4_A302 2,3-dimethylmalate lyase; alpha/beta barrel, helix 100.0
3lye_A307 Oxaloacetate acetyl hydrolase; (alpha/beta)8 barre 100.0
3ih1_A305 Methylisocitrate lyase; alpha-beta structure, TIM- 100.0
1zlp_A318 PSR132, petal death protein; TIM-barrel, helix swa 100.0
1xg4_A295 Probable methylisocitrate lyase; 2-methylisocitrat 100.0
2hjp_A290 Phosphonopyruvate hydrolase; phosporus-Ca cleavage 100.0
3b8i_A287 PA4872 oxaloacetate decarboxylase; alpha/beta barr 100.0
3eol_A433 Isocitrate lyase; seattle structural center for in 100.0
3lg3_A435 Isocitrate lyase; conserved, CD, proteomics eviden 100.0
3i4e_A439 Isocitrate lyase; structural genomics, seattle str 100.0
1s2w_A295 Phosphoenolpyruvate phosphomutase; phosphonopyruva 100.0
1f8m_A429 Isocitrate lyase, ICL; alpha-beta barrel, helix-sw 100.0
2ze3_A275 DFA0005; organic waste LEFT-OVER decomposition, al 100.0
2qiw_A255 PEP phosphonomutase; structural genomics, joint ce 100.0
1dqu_A538 Isocitrate lyase; beta barrel; 2.80A {Emericella n 100.0
3vav_A275 3-methyl-2-oxobutanoate hydroxymethyltransferase; 100.0
1m3u_A264 3-methyl-2-oxobutanoate hydroxymethyltransferase; 100.0
1o66_A275 3-methyl-2-oxobutanoate hydroxymethyltransferase; 100.0
1oy0_A281 Ketopantoate hydroxymethyltransferase; domain swap 100.0
2p10_A286 MLL9387 protein; putative phosphonopyruvate hydrol 98.37
1h5y_A253 HISF; histidine biosynthesis, TIM-barrel; 2.0A {Py 98.03
1thf_D253 HISF protein; thermophIle, TIM-barrel, histidine b 97.87
3igs_A232 N-acetylmannosamine-6-phosphate 2-epimerase 2; ene 97.75
2ekc_A262 AQ_1548, tryptophan synthase alpha chain; structur 97.73
3q58_A229 N-acetylmannosamine-6-phosphate 2-epimerase; TIM b 97.7
1ka9_F252 Imidazole glycerol phosphtate synthase; riken stru 97.69
2yxg_A289 DHDPS, dihydrodipicolinate synthase; MJ0244, TIM b 97.64
2ehh_A294 DHDPS, dihydrodipicolinate synthase; structural ge 97.64
3a5f_A291 Dihydrodipicolinate synthase; TIM barrel, enzyme, 97.62
3cpr_A304 Dihydrodipicolinate synthetase; (beta/alpha)8-barr 97.6
2tps_A227 Protein (thiamin phosphate synthase); thiamin bios 97.6
3m5v_A301 DHDPS, dihydrodipicolinate synthase; TIM barrel, c 97.59
3l21_A304 DHDPS, dihydrodipicolinate synthase; DAPA, dimer, 97.59
2ojp_A292 DHDPS, dihydrodipicolinate synthase; dimer, lysine 97.59
3flu_A297 DHDPS, dihydrodipicolinate synthase; TIM barrel, b 97.58
1xky_A301 Dihydrodipicolinate synthase; TIM barrel, , lysine 97.56
3qfe_A318 Putative dihydrodipicolinate synthase family PROT; 97.55
2qjg_A273 Putative aldolase MJ0400; beta-alpha barrel, lyase 97.52
2wkj_A303 N-acetylneuraminate lyase; directed evolution, sia 97.52
1o5k_A306 DHDPS, dihydrodipicolinate synthase; TM1521, struc 97.52
2r8w_A332 AGR_C_1641P; APC7498, dihydrodipicolinate synthase 97.51
3eb2_A300 Putative dihydrodipicolinate synthetase; lysine bi 97.5
3b4u_A294 Dihydrodipicolinate synthase; structural genomics, 97.5
3daq_A292 DHDPS, dihydrodipicolinate synthase; lysine biosyn 97.49
3tak_A291 DHDPS, dihydrodipicolinate synthase; TIM barrel, l 97.49
1f6k_A293 N-acetylneuraminate lyase; beta barrel; 1.60A {Hae 97.48
3tdn_A247 FLR symmetric alpha-beta TIM barrel; symmetric sup 97.47
3na8_A315 Putative dihydrodipicolinate synthetase; lyase; HE 97.47
1jub_A311 Dihydroorotate dehydrogenase A; homodimer, alpha-b 97.46
3fkr_A309 L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL f 97.46
2v9d_A343 YAGE; dihydrodipicolinic acid synthase, N-acetyl n 97.46
2rfg_A297 Dihydrodipicolinate synthase; beta barrel, amino-a 97.46
3qze_A314 DHDPS, dihydrodipicolinate synthase; alpha beta ba 97.45
2vc6_A292 MOSA, dihydrodipicolinate synthase; DHDPS, TIM bar 97.43
1yxy_A234 Putative N-acetylmannosamine-6-phosphate 2-epimer; 97.43
3d0c_A314 Dihydrodipicolinate synthase; lysine biosynthesis, 97.42
3si9_A315 DHDPS, dihydrodipicolinate synthase; structural ge 97.42
2w6r_A266 Imidazole glycerol phosphate synthase subunit HISF 97.41
3s5o_A307 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; 97.41
2e6f_A314 Dihydroorotate dehydrogenase; chagas disease, pyri 97.39
1qop_A268 Tryptophan synthase alpha chain; lyase, carbon-oxy 97.37
2nuw_A288 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho a 97.37
2r91_A286 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM 97.37
3e96_A316 Dihydrodipicolinate synthase; structural genomics, 97.35
1vzw_A244 Phosphoribosyl isomerase A; histidine biosynthesis 97.33
4dpp_A360 DHDPS 2, dihydrodipicolinate synthase 2, chloropla 97.33
4adt_A297 Pyridoxine biosynthetic enzyme PDX1 homologue, PU; 97.32
2y88_A244 Phosphoribosyl isomerase A; aromatic amino acid bi 97.3
3vnd_A267 TSA, tryptophan synthase alpha chain; psychrophili 97.3
1w3i_A293 EDA, 2-keto-3-deoxy gluconate aldolase; archaeal m 97.28
1rd5_A262 Tryptophan synthase alpha chain, chloroplast; hydr 97.22
3dz1_A313 Dihydrodipicolinate synthase; lysine biosynthesis, 97.18
3h5d_A311 DHDPS, dihydrodipicolinate synthase; lysine biosyn 97.17
3nav_A271 Tryptophan synthase alpha chain; alpha subunit, st 97.17
1gte_A1025 Dihydropyrimidine dehydrogenase; electron transfer 97.16
1xi3_A215 Thiamine phosphate pyrophosphorylase; structural g 97.12
1y0e_A223 Putative N-acetylmannosamine-6-phosphate 2-epimer; 97.09
1qo2_A241 Molecule: N-((5-phosphoribosyl)-formimino)-5-amino 97.04
3f4w_A211 Putative hexulose 6 phosphate synthase; humps, mal 97.0
1ujp_A271 Tryptophan synthase alpha chain; riken structural 96.99
2r14_A377 Morphinone reductase; H-tunnelling, flavoprotein, 96.97
1vyr_A364 Pentaerythritol tetranitrate reductase; oxidoreduc 96.94
1z41_A338 YQJM, probable NADH-dependent flavin oxidoreductas 96.94
1p0k_A349 Isopentenyl-diphosphate delta-isomerase; terpene b 96.91
1zco_A262 2-dehydro-3-deoxyphosphoheptonate aldolase; arabin 96.89
2f6u_A234 GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate sy 96.86
3b0p_A350 TRNA-dihydrouridine synthase; TIM barrel, oxidored 96.8
2hmc_A344 AGR_L_411P, dihydrodipicolinate synthase; alpha-be 96.78
2nwr_A267 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KD 96.76
2v82_A212 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; l 96.72
2fiq_A420 Putative tagatose 6-phosphate kinase 1; structural 96.69
1viz_A240 PCRB protein homolog; structural genomics, unknown 96.67
1mdl_A359 Mandelate racemase; isomerase, mandelate pathway, 96.67
2z6i_A332 Trans-2-enoyl-ACP reductase II; fatty acid synthes 96.65
2yzr_A330 Pyridoxal biosynthesis lyase PDXS; redox protein, 96.63
1f76_A336 Dihydroorotate dehydrogenase; monomer, alpha-beta- 96.59
3sz8_A285 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgci 96.58
2gou_A365 Oxidoreductase, FMN-binding; OLD yeallow enzyme, f 96.56
2nv1_A305 Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-b 96.54
1ps9_A 671 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel 96.53
2zad_A345 Muconate cycloisomerase; muconate lactonizing enzy 96.5
2p8b_A369 Mandelate racemase/muconate lactonizing enzyme fam 96.49
1gvf_A286 Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; 96.48
2rdx_A379 Mandelate racemase/muconate lactonizing enzyme, P; 96.46
3hgj_A349 Chromate reductase; TIM barrel, oxidoreductase; HE 96.45
4ef8_A354 Dihydroorotate dehydrogenase; phenyl isothiocyanat 96.43
3ru6_A303 Orotidine 5'-phosphate decarboxylase; structural g 96.41
1tkk_A366 Similar to chloromuconate cycloisomerase; epimeras 96.37
1to3_A304 Putative aldolase YIHT; beta-alpha barrel, structu 96.31
1vr6_A350 Phospho-2-dehydro-3-deoxyheptonate aldolase; TM034 96.29
1wv2_A265 Thiazole moeity, thiazole biosynthesis protein THI 96.21
1z41_A338 YQJM, probable NADH-dependent flavin oxidoreductas 96.2
3o63_A243 Probable thiamine-phosphate pyrophosphorylase; thi 96.19
3tsm_A272 IGPS, indole-3-glycerol phosphate synthase; struct 96.19
3m47_A228 Orotidine 5'-phosphate decarboxylase; orotidine 5' 96.16
2oz8_A389 MLL7089 protein; structural genomics, unknown func 96.12
2ovl_A371 Putative racemase; structural genomics, PSI-2, pro 96.1
3q94_A288 Fructose-bisphosphate aldolase, class II; structur 96.09
1icp_A376 OPR1, 12-oxophytodienoate reductase 1; beta-alpha- 96.08
2ps2_A371 Putative mandelate racemase/muconate lactonizing e 96.05
3tfx_A259 Orotidine 5'-phosphate decarboxylase; PSI-biology, 96.04
1geq_A248 Tryptophan synthase alpha-subunit; hyperthermophIl 96.03
3nvt_A385 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; 96.02
2pcq_A283 Putative dihydrodipicolinate synthase; lyase, lysi 96.02
3zwt_A367 Dihydroorotate dehydrogenase (quinone), mitochond; 95.99
3sr7_A365 Isopentenyl-diphosphate delta-isomerase; isopenten 95.99
3r0u_A379 Enzyme of enolase superfamily; structural genomics 95.97
2zbt_A297 Pyridoxal biosynthesis lyase PDXS; pyridoxine bios 95.96
2qde_A397 Mandelate racemase/muconate lactonizing enzyme FA 95.96
1jvn_A555 Glutamine, bifunctional histidine biosynthesis pro 95.96
1rvk_A382 Isomerase/lactonizing enzyme; enolase superfamily, 95.95
1ep3_A311 Dihydroorotate dehydrogenase B (PYRD subunit); het 95.92
3bo9_A326 Putative nitroalkan dioxygenase; TM0800, structura 95.89
3bjs_A428 Mandelate racemase/muconate lactonizing enzyme; en 95.85
3gr7_A340 NADPH dehydrogenase; flavin, FMN, beta-alpha-barre 95.78
1o66_A275 3-methyl-2-oxobutanoate hydroxymethyltransferase; 95.77
3o07_A291 Pyridoxine biosynthesis protein SNZ1; (beta/alpha) 95.75
3txv_A450 Probable tagatose 6-phosphate kinase; structural g 95.71
3iwp_A287 Copper homeostasis protein CUTC homolog; conserved 95.69
1m3u_A264 3-methyl-2-oxobutanoate hydroxymethyltransferase; 95.64
4e5t_A404 Mandelate racemase / muconate lactonizing enzyme, 95.63
3ozy_A389 Putative mandelate racemase; beta-alpha barrel, en 95.6
1jub_A311 Dihydroorotate dehydrogenase A; homodimer, alpha-b 95.6
3qja_A272 IGPS, indole-3-glycerol phosphate synthase; struct 95.6
1vs1_A276 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha 95.6
3l5l_A363 Xenobiotic reductase A; TIM barrel, oxidoreductase 95.58
2pp0_A398 L-talarate/galactarate dehydratase; enolase superf 95.56
2og9_A393 Mandelate racemase/muconate lactonizing enzyme; NY 95.56
3vav_A275 3-methyl-2-oxobutanoate hydroxymethyltransferase; 95.56
1nu5_A370 Chloromuconate cycloisomerase; enzyme, dehalogenat 95.54
3khj_A361 Inosine-5-monophosphate dehydrogenase; enzyme-inhi 95.47
3pm6_A306 Putative fructose-bisphosphate aldolase; structura 95.46
3fs2_A298 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, 95.37
2qkf_A280 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; 95.32
3gr7_A340 NADPH dehydrogenase; flavin, FMN, beta-alpha-barre 95.31
1o60_A292 2-dehydro-3-deoxyphosphooctonate aldolase; structu 95.3
2hxt_A441 L-fuconate dehydratase; enolase superfamily, D-ery 95.24
1y0e_A223 Putative N-acetylmannosamine-6-phosphate 2-epimer; 95.19
2nli_A368 Lactate oxidase; flavoenzyme, FMN, D-lactate, oxid 95.18
1xm3_A264 Thiazole biosynthesis protein THIG; structural gen 95.18
2pgw_A384 Muconate cycloisomerase; enolase superfamily, octa 95.16
3stp_A412 Galactonate dehydratase, putative; PSI biology, st 95.1
2qgy_A391 Enolase from the environmental genome shotgun sequ 95.09
1ypf_A336 GMP reductase; GUAC, purines, pyrimidines, nucleos 95.06
3gd6_A391 Muconate cycloisomerase; structural genomics, NYSG 95.05
3sjn_A374 Mandelate racemase/muconate lactonizing protein; e 94.99
3i65_A415 Dihydroorotate dehydrogenase homolog, mitochondria 94.97
2e6f_A314 Dihydroorotate dehydrogenase; chagas disease, pyri 94.94
1ydn_A295 Hydroxymethylglutaryl-COA lyase; TIM-barrel protei 94.94
3vkj_A368 Isopentenyl-diphosphate delta-isomerase; type 2 is 94.89
1h7n_A342 5-aminolaevulinic acid dehydratase; lyase, aldolas 94.87
1f76_A336 Dihydroorotate dehydrogenase; monomer, alpha-beta- 94.86
4fo4_A366 Inosine 5'-monophosphate dehydrogenase; structural 94.81
4dwd_A393 Mandelate racemase/muconate lactonizing enzyme, C 94.8
3tml_A288 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, 94.79
2czd_A208 Orotidine 5'-phosphate decarboxylase; pyrimidine b 94.79
3eez_A378 Putative mandelate racemase/muconate lactonizing e 94.78
1wv2_A265 Thiazole moeity, thiazole biosynthesis protein THI 94.76
3igs_A232 N-acetylmannosamine-6-phosphate 2-epimerase 2; ene 94.76
4e4u_A412 Mandalate racemase/muconate lactonizing enzyme; ma 94.74
3r2g_A361 Inosine 5'-monophosphate dehydrogenase; structural 94.62
2qdd_A378 Mandelate racemase/muconate lactonizing enzyme; en 94.61
3l5a_A419 NADH/flavin oxidoreductase/NADH oxidase; OLD yello 94.6
2h6r_A219 Triosephosphate isomerase; beta-alpha barrel; 2.30 94.59
3hgj_A349 Chromate reductase; TIM barrel, oxidoreductase; HE 94.59
3sgz_A352 Hydroxyacid oxidase 2; flavoprotein, homology, INH 94.58
2nql_A388 AGR_PAT_674P, isomerase/lactonizing enzyme; enolas 94.55
2gjl_A328 Hypothetical protein PA1024; 2-nitropropane dioxyg 94.52
3ffs_A400 Inosine-5-monophosphate dehydrogenase; beta-alpha 94.47
3kru_A343 NADH:flavin oxidoreductase/NADH oxidase; homotetra 94.42
2htm_A268 Thiazole biosynthesis protein THIG; thiamin biosyn 94.39
2gdq_A382 YITF; mandelate racemase/muconate lactonizing enzy 94.38
1tzz_A392 Hypothetical protein L1841; structural genomics, m 94.33
4ab4_A362 Xenobiotic reductase B; oxidoreductase, OLD yellow 94.28
3b0p_A350 TRNA-dihydrouridine synthase; TIM barrel, oxidored 94.25
3toy_A383 Mandelate racemase/muconate lactonizing enzyme FA 94.22
3qw3_A255 Orotidine-5-phosphate decarboxylase/orotate phosph 94.18
3aty_A379 Tcoye, prostaglandin F2A synthase; alpha/beta barr 94.18
2ftp_A302 Hydroxymethylglutaryl-COA lyase; structural genomi 94.15
1twd_A256 Copper homeostasis protein CUTC; TIM-like protein, 94.11
3rcy_A433 Mandelate racemase/muconate lactonizing enzyme-LI 94.1
3q58_A229 N-acetylmannosamine-6-phosphate 2-epimerase; TIM b 94.08
1yad_A221 Regulatory protein TENI; TIM barrel, transcription 94.06
3jva_A354 Dipeptide epimerase; enolase superfamily, isomeras 94.06
1dqu_A538 Isocitrate lyase; beta barrel; 2.80A {Emericella n 94.05
3kru_A343 NADH:flavin oxidoreductase/NADH oxidase; homotetra 94.05
2hsa_B402 12-oxophytodienoate reductase 3; alpha beta 8 barr 94.05
3iwp_A287 Copper homeostasis protein CUTC homolog; conserved 94.02
4fo4_A366 Inosine 5'-monophosphate dehydrogenase; structural 94.01
1rvg_A305 Fructose-1,6-bisphosphate aldolase; class II aldol 93.95
2qq6_A410 Mandelate racemase/muconate lactonizing enzyme- li 93.92
1tv5_A443 Dhodehase, dihydroorotate dehydrogenase homolog, m 93.91
2nzl_A392 Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, G 93.9
2poz_A392 Putative dehydratase; octamer, structural genomics 93.83
1gox_A370 (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoredu 93.82
3khj_A361 Inosine-5-monophosphate dehydrogenase; enzyme-inhi 93.81
4ef8_A354 Dihydroorotate dehydrogenase; phenyl isothiocyanat 93.8
1pv8_A330 Delta-aminolevulinic acid dehydratase; porphobilin 93.79
2cw6_A298 Hydroxymethylglutaryl-COA lyase, mitochondrial; HM 93.79
3gka_A361 N-ethylmaleimide reductase; decode biostructures, 93.78
1vhn_A318 Putative flavin oxidoreducatase; structural genomi 93.73
3rr1_A405 GALD, putative D-galactonate dehydratase; enolase, 93.67
1mzh_A225 Deoxyribose-phosphate aldolase; alpha-beta barrel, 93.65
2ze3_A275 DFA0005; organic waste LEFT-OVER decomposition, al 93.65
3ik4_A365 Mandelate racemase/muconate lactonizing protein; s 93.57
2nli_A368 Lactate oxidase; flavoenzyme, FMN, D-lactate, oxid 93.55
1wa3_A205 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, 93.49
1w8s_A263 FBP aldolase, fructose-bisphosphate aldolase class 93.48
1jcn_A514 Inosine monophosphate dehydrogenase I; IMPD, IMPDH 93.48
3vzx_A228 Heptaprenylglyceryl phosphate synthase; biosynthes 93.47
2o56_A407 Putative mandelate racemase; dehydratase, structur 93.46
3mqt_A394 Mandelate racemase/muconate lactonizing protein; P 93.45
2gl5_A410 Putative dehydratase protein; structural genomics, 93.41
1oy0_A281 Ketopantoate hydroxymethyltransferase; domain swap 93.41
3ajx_A207 3-hexulose-6-phosphate synthase; HPS, OMPDC supraf 93.37
1eep_A404 Inosine 5'-monophosphate dehydrogenase; alpha-beta 93.36
4e8g_A391 Enolase, mandelate racemase/muconate lactonizing e 93.34
3l5l_A363 Xenobiotic reductase A; TIM barrel, oxidoreductase 93.33
3sgz_A352 Hydroxyacid oxidase 2; flavoprotein, homology, INH 93.32
1vrd_A494 Inosine-5'-monophosphate dehydrogenase; TM1347, st 93.31
2ox4_A403 Putative mandelate racemase; enolase, dehydratase, 93.3
3ffs_A400 Inosine-5-monophosphate dehydrogenase; beta-alpha 93.29
2hzg_A401 Mandelate racemase/muconate lactonizing enzyme/EN 93.25
1jcn_A514 Inosine monophosphate dehydrogenase I; IMPD, IMPDH 93.19
1ypf_A336 GMP reductase; GUAC, purines, pyrimidines, nucleos 93.18
3oa3_A288 Aldolase; structural genomics, seattle structural 92.99
1vhn_A318 Putative flavin oxidoreducatase; structural genomi 92.88
3tj4_A372 Mandelate racemase; enolase, dehydratase, enzyme f 92.87
3iv3_A332 Tagatose 1,6-diphosphate aldolase 2; TIM barrel, p 92.86
4avf_A490 Inosine-5'-monophosphate dehydrogenase; oxidoreduc 92.84
1vc4_A254 Indole-3-glycerol phosphate synthase; lyase, trypt 92.83
2c6q_A351 GMP reductase 2; TIM barrel, metal-binding, NADP, 92.83
3ble_A337 Citramalate synthase from leptospira interrogans; 92.81
2nx9_A464 Oxaloacetate decarboxylase 2, subunit alpha; carbo 92.76
2ftp_A302 Hydroxymethylglutaryl-COA lyase; structural genomi 92.76
2cw6_A298 Hydroxymethylglutaryl-COA lyase, mitochondrial; HM 92.76
3ugv_A390 Enolase; enzyme function initiative, EFI, lyase; 2 92.75
4fxs_A496 Inosine-5'-monophosphate dehydrogenase; structural 92.7
4dbe_A222 Orotidine 5'-phosphate decarboxylase; TIM barrel, 92.69
3n9r_A307 Fructose-bisphosphate aldolase; FBP aldolase, clas 92.65
3r12_A260 Deoxyribose-phosphate aldolase; TIM beta/alpha-bar 92.61
3fv9_G386 Mandelate racemase/muconate lactonizing enzyme; st 92.61
3go2_A409 Putative L-alanine-DL-glutamate epimerase; structu 92.57
3i4k_A383 Muconate lactonizing enzyme; structural genomics, 92.56
3t6c_A440 RSPA, putative MAND family dehydratase; enolase, m 92.55
3zwt_A367 Dihydroorotate dehydrogenase (quinone), mitochond; 92.53
3bw2_A369 2-nitropropane dioxygenase; TIM barrel, oxidoreduc 92.52
2bdq_A224 Copper homeostasis protein CUTC; alpha beta protei 92.52
3mkc_A394 Racemase; metabolic process, PSI2, NYSGXRC, struct 92.44
3oix_A345 Putative dihydroorotate dehydrogenase; dihydrooro 92.3
3ddm_A392 Putative mandelate racemase/muconate lactonizing e 92.28
1rqb_A 539 Transcarboxylase 5S subunit; TIM-barrel, carbamyla 92.26
3rmj_A370 2-isopropylmalate synthase; LEUA, truncation, neis 92.23
3q45_A368 Mandelate racemase/muconate lactonizing enzyme FA 92.19
2ztj_A382 Homocitrate synthase; (beta/alpha)8 TIM barrel, su 92.19
3ro6_B356 Putative chloromuconate cycloisomerase; TIM barrel 92.17
4h2h_A376 Mandelate racemase/muconate lactonizing enzyme; en 92.17
3tr2_A239 Orotidine 5'-phosphate decarboxylase; purines, pyr 92.17
1ydo_A307 HMG-COA lyase; TIM-barrel protein, structural geno 92.15
1ub3_A220 Aldolase protein; schiff base, deoxyribose phospha 92.1
1lt8_A406 Betaine-homocysteine methyltransferase; homocystei 92.07
3vc5_A441 Mandelate racemase/muconate lactonizing protein; d 92.06
2htm_A268 Thiazole biosynthesis protein THIG; thiamin biosyn 92.04
4djd_D323 C/Fe-SP, corrinoid/iron-sulfur protein small subun 92.03
1vrd_A494 Inosine-5'-monophosphate dehydrogenase; TM1347, st 91.97
1h1y_A228 D-ribulose-5-phosphate 3-epimerase; oxidative pent 91.94
1vhc_A224 Putative KHG/KDPG aldolase; structural genomics, u 91.92
4avf_A490 Inosine-5'-monophosphate dehydrogenase; oxidoreduc 91.87
1xm3_A264 Thiazole biosynthesis protein THIG; structural gen 91.85
1rd5_A262 Tryptophan synthase alpha chain, chloroplast; hydr 91.85
3nl6_A 540 Thiamine biosynthetic bifunctional enzyme; thiamin 91.84
1ydo_A307 HMG-COA lyase; TIM-barrel protein, structural geno 91.81
1nvm_A345 HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered 91.78
3ldv_A255 Orotidine 5'-phosphate decarboxylase; structural g 91.77
2yw3_A207 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deox 91.75
1ps9_A 671 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel 91.75
1eix_A245 Orotidine 5'-monophosphate decarboxylase; alpha-be 91.74
3tqv_A287 Nicotinate-nucleotide pyrophosphorylase; glycosylt 91.73
1n7k_A234 Deoxyribose-phosphate aldolase; A.pernix, tetramer 91.67
3glc_A295 Aldolase LSRF; TIM barrel, lyase, schiff base; HET 91.65
2agk_A260 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) me 91.63
3qw4_B453 UMP synthase; N-terminal orotidine monophosphate d 91.59
2nzl_A392 Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, G 91.59
3ceu_A210 Thiamine phosphate pyrophosphorylase; TIM barrel-l 91.59
3s5s_A389 Mandelate racemase/muconate lactonizing enzyme FA 91.52
3gka_A361 N-ethylmaleimide reductase; decode biostructures, 91.51
3ngj_A239 Deoxyribose-phosphate aldolase; lyase, structural 91.49
1eep_A404 Inosine 5'-monophosphate dehydrogenase; alpha-beta 91.48
1kbi_A511 Cytochrome B2, L-LCR; flavocytochrome B2, electron 91.43
3dg3_A367 Muconate cycloisomerase; muconate lactonizing enzy 91.42
3vdg_A445 Probable glucarate dehydratase; enolase, magnesium 91.4
3usb_A511 Inosine-5'-monophosphate dehydrogenase; structural 91.29
1o5k_A306 DHDPS, dihydrodipicolinate synthase; TM1521, struc 91.29
1dbt_A239 Orotidine 5'-phosphate decarboxylase; UMP, TIM bar 91.19
3my9_A377 Muconate cycloisomerase; structural genomics, PSI- 91.19
1o94_A 729 Tmadh, trimethylamine dehydrogenase; electron tran 91.16
1vyr_A364 Pentaerythritol tetranitrate reductase; oxidoreduc 91.15
4ab4_A362 Xenobiotic reductase B; oxidoreductase, OLD yellow 91.1
2gjl_A328 Hypothetical protein PA1024; 2-nitropropane dioxyg 91.08
3ndo_A231 Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid 91.05
4fxs_A496 Inosine-5'-monophosphate dehydrogenase; structural 90.97
1gte_A1025 Dihydropyrimidine dehydrogenase; electron transfer 90.97
1l6s_A323 Porphobilinogen synthase; dehydratase, lyase; HET: 90.96
3bw2_A369 2-nitropropane dioxygenase; TIM barrel, oxidoreduc 90.95
1to3_A304 Putative aldolase YIHT; beta-alpha barrel, structu 90.92
1twd_A256 Copper homeostasis protein CUTC; TIM-like protein, 90.88
3jr2_A218 Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulon 90.86
4a35_A441 Mitochondrial enolase superfamily member 1; isomer 90.83
3r4e_A418 Mandelate racemase/muconate lactonizing enzyme; en 90.78
1mzh_A225 Deoxyribose-phosphate aldolase; alpha-beta barrel, 90.77
3va8_A445 Probable dehydratase; enolase, magnesium binding s 90.74
3l0g_A300 Nicotinate-nucleotide pyrophosphorylase; ssgcid, N 90.7
1ydn_A295 Hydroxymethylglutaryl-COA lyase; TIM-barrel protei 90.7
3k30_A 690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 90.66
1yad_A221 Regulatory protein TENI; TIM barrel, transcription 90.63
4af0_A556 Inosine-5'-monophosphate dehydrogenase; oxidoreduc 90.61
2vc6_A292 MOSA, dihydrodipicolinate synthase; DHDPS, TIM bar 90.58
4h1z_A412 Enolase Q92ZS5; dehydratase, magnesium binding sit 90.58
2v82_A212 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; l 90.56
2ehh_A294 DHDPS, dihydrodipicolinate synthase; structural ge 90.53
1eye_A280 DHPS 1, dihydropteroate synthase I; alpha-beta bar 90.52
3qz6_A261 HPCH/HPAI aldolase; structural genomics, PSI-biolo 90.52
2gou_A365 Oxidoreductase, FMN-binding; OLD yeallow enzyme, f 90.51
3vcn_A425 Mannonate dehydratase; enolase, magnesium binding 90.5
1p0k_A349 Isopentenyl-diphosphate delta-isomerase; terpene b 90.5
1me8_A503 Inosine-5'-monophosphate dehydrogenase; alpha beta 90.48
1tqj_A230 Ribulose-phosphate 3-epimerase; beta-alpha barrel 90.46
4hnl_A421 Mandelate racemase/muconate lactonizing enzyme; de 90.39
1p4c_A380 L(+)-mandelate dehydrogenase; TIM barrel, hydroxy 90.3
1i4n_A251 Indole-3-glycerol phosphate synthase; thermostable 90.03
3p3b_A392 Mandelate racemase/muconate lactonizing protein; e 89.96
3bo9_A326 Putative nitroalkan dioxygenase; TM0800, structura 89.89
1w1z_A328 Delta-aminolevulinic acid dehydratase; synthase, t 89.64
1qwg_A251 PSL synthase;, (2R)-phospho-3-sulfolactate synthas 89.63
1ep3_A311 Dihydroorotate dehydrogenase B (PYRD subunit); het 89.55
1aj0_A282 DHPS, dihydropteroate synthase; antibiotic, resist 89.55
2vp8_A318 Dihydropteroate synthase 2; RV1207 transferase, fo 89.52
2pge_A377 MENC; OSBS, NYSGXRC, PSI-II, structural genomics, 89.52
3ewb_X293 2-isopropylmalate synthase; LEUA, structural genom 89.45
2ozt_A332 TLR1174 protein; structural genomics, O-succinylbe 89.43
3noy_A366 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; 89.35
1vcf_A332 Isopentenyl-diphosphate delta-isomerase; TIM barre 89.33
3rmj_A370 2-isopropylmalate synthase; LEUA, truncation, neis 89.31
3fcp_A381 L-Ala-D/L-Glu epimerase, A muconate lactonizing en 89.3
1yxy_A234 Putative N-acetylmannosamine-6-phosphate 2-epimer; 89.24
3usb_A511 Inosine-5'-monophosphate dehydrogenase; structural 89.21
1mxs_A225 KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate a 89.18
2qr6_A393 IMP dehydrogenase/GMP reductase; NP_599840.1, G re 89.14
3dgb_A382 Muconate cycloisomerase; muconate lactonizing enzy 89.14
1qpo_A284 Quinolinate acid phosphoribosyl transferase; type 89.1
1w5q_A337 Delta-aminolevulinic acid dehydratase; synthase, e 89.03
4hb7_A270 Dihydropteroate synthase; transferase; 1.95A {Stap 89.0
1wbh_A214 KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} 88.98
3v3w_A424 Starvation sensing protein RSPA; enolase, enzyme f 88.97
3tji_A422 Mandelate racemase/muconate lactonizing enzyme, N 88.96
2ekc_A262 AQ_1548, tryptophan synthase alpha chain; structur 88.96
1n8f_A350 DAHP synthetase; (beta/alpha)8 barrel, metal bindi 88.96
1sjd_A368 N-acylamino acid racemase; lyase, isomerase; HET: 88.89
2r14_A377 Morphinone reductase; H-tunnelling, flavoprotein, 88.85
4dye_A398 Isomerase; enolase family protein, EFI, enzym func 88.85
1gox_A370 (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoredu 88.76
3i65_A415 Dihydroorotate dehydrogenase homolog, mitochondria 88.75
3ewb_X293 2-isopropylmalate synthase; LEUA, structural genom 88.75
3i6e_A385 Muconate cycloisomerase I; structural genomics, NY 88.54
1q6o_A216 Humps, 3-keto-L-gulonate 6-phosphate decarboxylase 88.51
3u9i_A393 Mandelate racemase/muconate lactonizing enzyme, C 88.51
1icp_A376 OPR1, 12-oxophytodienoate reductase 1; beta-alpha- 88.51
3dip_A410 Enolase; structural genomics, isomerase, PSI-2, pr 88.5
1zlp_A318 PSR132, petal death protein; TIM-barrel, helix swa 88.47
3fa4_A302 2,3-dimethylmalate lyase; alpha/beta barrel, helix 88.39
3r2g_A361 Inosine 5'-monophosphate dehydrogenase; structural 88.38
1vqt_A213 Orotidine 5'-phosphate decarboxylase; TM0332, stru 88.17
3o63_A243 Probable thiamine-phosphate pyrophosphorylase; thi 88.11
1tx2_A297 DHPS, dihydropteroate synthase; folate biosynthesi 88.04
1rpx_A230 Protein (ribulose-phosphate 3-epimerase); chloropl 88.02
1xg4_A295 Probable methylisocitrate lyase; 2-methylisocitrat 87.9
2r91_A286 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM 87.9
3n3m_A342 Orotidine 5'-phosphate decarboxylase; P. falciparu 87.78
1q7z_A566 5-methyltetrahydrofolate S-homocysteine methyltran 87.71
3sr7_A365 Isopentenyl-diphosphate delta-isomerase; isopenten 87.66
2zbt_A297 Pyridoxal biosynthesis lyase PDXS; pyridoxine bios 87.65
1xi3_A215 Thiamine phosphate pyrophosphorylase; structural g 87.59
3sbf_A401 Mandelate racemase / muconate lactonizing enzyme; 87.56
4e38_A232 Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho 87.55
3ve9_A215 Orotidine-5'-phosphate decarboxylase; TIM barrel f 87.53
2isw_A323 Putative fructose-1,6-bisphosphate aldolase; class 87.52
3iv3_A332 Tagatose 1,6-diphosphate aldolase 2; TIM barrel, p 87.43
2dqw_A294 Dihydropteroate synthase; dimer, structural genomi 87.43
2qiw_A255 PEP phosphonomutase; structural genomics, joint ce 87.4
3eeg_A325 2-isopropylmalate synthase; 11106D, beta barrel, P 87.37
3elf_A349 Fructose-bisphosphate aldolase; zinc enzyme, dihyd 87.35
1dos_A358 Aldolase class II; lyase, classii fructose 1,6-bis 87.32
3qm3_A357 Fructose-bisphosphate aldolase; structural genomic 87.28
1zfj_A491 Inosine monophosphate dehydrogenase; IMPDH, CBS do 87.22
3w01_A235 Heptaprenylglyceryl phosphate synthase; biosynthes 87.15
1qop_A268 Tryptophan synthase alpha chain; lyase, carbon-oxy 87.12
1xky_A301 Dihydrodipicolinate synthase; TIM barrel, , lysine 86.85
3ivs_A423 Homocitrate synthase, mitochondrial; TIM barrel, m 86.84
3eoo_A298 Methylisocitrate lyase; seattle structural genomic 86.84
2hsa_B402 12-oxophytodienoate reductase 3; alpha beta 8 barr 86.83
3bg3_A 718 Pyruvate carboxylase, mitochondrial; TIM barrel, A 86.82
2bdq_A224 Copper homeostasis protein CUTC; alpha beta protei 86.81
3ble_A337 Citramalate synthase from leptospira interrogans; 86.77
3mzn_A450 Glucarate dehydratase; lyase, structural genomics, 86.76
2chr_A370 Chloromuconate cycloisomerase; 3.00A {Cupriavidus 86.53
3o07_A291 Pyridoxine biosynthesis protein SNZ1; (beta/alpha) 86.53
2h9a_B310 CO dehydrogenase/acetyl-COA synthase, iron- sulfur 86.42
1nvm_A345 HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered 86.34
1w3i_A293 EDA, 2-keto-3-deoxy gluconate aldolase; archaeal m 86.25
1zfj_A491 Inosine monophosphate dehydrogenase; IMPDH, CBS do 86.2
2qjg_A273 Putative aldolase MJ0400; beta-alpha barrel, lyase 86.08
3gnn_A298 Nicotinate-nucleotide pyrophosphorylase; decode bi 86.07
1kbi_A511 Cytochrome B2, L-LCR; flavocytochrome B2, electron 85.92
3ivs_A423 Homocitrate synthase, mitochondrial; TIM barrel, m 85.75
3oix_A345 Putative dihydroorotate dehydrogenase; dihydrooro 85.6
3tcs_A388 Racemase, putative; PSI-biology, nysgrc, structura 85.59
2ffc_A353 Orotidine 5-monophosphate decarboxylase; PV-PF10_0 85.54
4e4f_A426 Mannonate dehydratase; magnesium binding, enzyme f 85.5
3p0w_A470 Mandelate racemase/muconate lactonizing protein; s 85.25
3vnd_A267 TSA, tryptophan synthase alpha chain; psychrophili 85.19
3cyj_A372 Mandelate racemase/muconate lactonizing enzyme-LI 85.14
2fli_A220 Ribulose-phosphate 3-epimerase; (beta/alpha)8-barr 85.01
3qz6_A261 HPCH/HPAI aldolase; structural genomics, PSI-biolo 84.83
1o4u_A285 Type II quinolic acid phosphoribosyltransferase; s 84.67
2v9d_A343 YAGE; dihydrodipicolinic acid synthase, N-acetyl n 84.62
1lt8_A406 Betaine-homocysteine methyltransferase; homocystei 84.42
2y5s_A294 DHPS, dihydropteroate synthase; transferase, folat 84.32
3tha_A252 Tryptophan synthase alpha chain; structural genomi 84.24
1chr_A370 Chloromuconate cycloisomerase; 3.00A {Ralstonia eu 84.23
3l5a_A419 NADH/flavin oxidoreductase/NADH oxidase; OLD yello 84.17
2wqp_A349 Polysialic acid capsule biosynthesis protein SIAC; 84.15
3lye_A307 Oxaloacetate acetyl hydrolase; (alpha/beta)8 barre 84.14
3tdn_A247 FLR symmetric alpha-beta TIM barrel; symmetric sup 84.12
3exr_A221 RMPD (hexulose-6-phosphate synthase); beta barrel, 84.12
4hpn_A378 Putative uncharacterized protein; enolase, enzyme 84.1
2hjp_A290 Phosphonopyruvate hydrolase; phosporus-Ca cleavage 84.1
3obk_A356 Delta-aminolevulinic acid dehydratase; ssgcid, str 84.02
3ovp_A228 Ribulose-phosphate 3-epimerase; iron binding, isom 83.85
3vkj_A368 Isopentenyl-diphosphate delta-isomerase; type 2 is 83.82
2z6i_A332 Trans-2-enoyl-ACP reductase II; fatty acid synthes 83.81
3ih1_A305 Methylisocitrate lyase; alpha-beta structure, TIM- 83.78
2tps_A227 Protein (thiamin phosphate synthase); thiamin bios 83.77
2agk_A260 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) me 83.75
3qja_A272 IGPS, indole-3-glycerol phosphate synthase; struct 83.72
2yzr_A330 Pyridoxal biosynthesis lyase PDXS; redox protein, 83.71
2bmb_A545 Folic acid synthesis protein FOL1; folate biosynth 83.46
3paj_A320 Nicotinate-nucleotide pyrophosphorylase, carboxyl; 83.31
3aty_A379 Tcoye, prostaglandin F2A synthase; alpha/beta barr 83.14
2opj_A327 O-succinylbenzoate-COA synthase; TIM barrel, struc 83.12
1vli_A385 Spore coat polysaccharide biosynthesis protein SP; 83.1
3nav_A271 Tryptophan synthase alpha chain; alpha subunit, st 83.03
3gnn_A298 Nicotinate-nucleotide pyrophosphorylase; decode bi 83.02
2qr6_A393 IMP dehydrogenase/GMP reductase; NP_599840.1, G re 82.99
3ngj_A239 Deoxyribose-phosphate aldolase; lyase, structural 82.98
2fds_A352 Orotidine-monophosphate-decarboxylase; TIM barrel, 82.94
3fok_A307 Uncharacterized protein CGL0159; CGL0159 ,brevibac 82.81
2w6r_A266 Imidazole glycerol phosphate synthase subunit HISF 82.64
2uva_G 2060 Fatty acid synthase beta subunits; fungal, dehydra 82.63
4a29_A258 Engineered retro-aldol enzyme RA95.0; de novo prot 82.58
3pfr_A455 Mandelate racemase/muconate lactonizing protein; e 82.54
2cu0_A486 Inosine-5'-monophosphate dehydrogenase; structural 82.44
1h5y_A253 HISF; histidine biosynthesis, TIM-barrel; 2.0A {Py 82.37
1p4c_A380 L(+)-mandelate dehydrogenase; TIM barrel, hydroxy 82.35
2yr1_A257 3-dehydroquinate dehydratase; amino acid biosynthe 82.1
1u83_A276 Phosphosulfolactate synthase; structural genomics, 81.97
1s2w_A295 Phosphoenolpyruvate phosphomutase; phosphonopyruva 81.46
3b8i_A287 PA4872 oxaloacetate decarboxylase; alpha/beta barr 81.39
3daq_A292 DHDPS, dihydrodipicolinate synthase; lysine biosyn 81.36
3i4e_A439 Isocitrate lyase; structural genomics, seattle str 81.17
1thf_D253 HISF protein; thermophIle, TIM-barrel, histidine b 81.15
3mwc_A400 Mandelate racemase/muconate lactonizing protein; e 81.1
3qfw_A378 Ribulose-1,5-bisphosphate carboxylase/oxygenase L 81.08
3dz1_A313 Dihydrodipicolinate synthase; lysine biosynthesis, 80.64
3qze_A314 DHDPS, dihydrodipicolinate synthase; alpha beta ba 80.59
3tsm_A272 IGPS, indole-3-glycerol phosphate synthase; struct 80.52
3eb2_A300 Putative dihydrodipicolinate synthetase; lysine bi 80.47
3inp_A246 D-ribulose-phosphate 3-epimerase; IDP02542, isomer 80.45
2yyu_A246 Orotidine 5'-phosphate decarboxylase; TIM barrel, 80.42
2y88_A244 Phosphoribosyl isomerase A; aromatic amino acid bi 80.39
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7 Back     alignment and structure
Probab=100.00  E-value=4.1e-75  Score=580.99  Aligned_cols=289  Identities=31%  Similarity=0.492  Sum_probs=274.2

Q ss_pred             ccCchHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCc
Q 012478           73 ACLSPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIP  152 (462)
Q Consensus        73 ~a~~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iP  152 (462)
                      ..++++++||++|++++++++|||||++||++++++|||+||+||++++++++|+||++.+|++||++|+++|++++++|
T Consensus         6 ~~~~~~~~lr~l~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~P   85 (298)
T 3eoo_A            6 QLISAGAKFRAAVAAEQPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLP   85 (298)
T ss_dssp             -CCCHHHHHHHHHHHSSSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSC
T ss_pred             ccccHHHHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCe
Confidence            35678999999999999999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             EEEeCCCCCCCHHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecc
Q 012478          153 VIGDGDNGYGNAMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTD  232 (462)
Q Consensus       153 VIaD~DtGyG~~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTD  232 (462)
                      ||+|+|+|||+++++.+++++|+++||+|||||||++||+|||++||+|+|.+||++||+||++|++  ++||+|+||||
T Consensus        86 viaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~--~~~~~I~ARTD  163 (298)
T 3eoo_A           86 LLVDIDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDART--DETFVIMARTD  163 (298)
T ss_dssp             EEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCS--STTSEEEEEEC
T ss_pred             EEEECCCCCCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhcc--CCCeEEEEeeh
Confidence            9999999999999999999999999999999999999999999999999999999999999999986  68999999999


Q ss_pred             hhhcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccch
Q 012478          233 SRQALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLS  312 (462)
Q Consensus       233 A~~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~  312 (462)
                      ++...++||+|+|+++|++||||+||+|++++.+++++|++.++ +|+++|++++ |++|.++.+||+++||++|+||++
T Consensus       164 a~~~~gldeai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~-~Pl~~n~~~~-g~tp~~~~~eL~~lGv~~v~~~~~  241 (298)
T 3eoo_A          164 AAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVK-VPILANLTEF-GSTPLFTLDELKGANVDIALYCCG  241 (298)
T ss_dssp             THHHHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHC-SCBEEECCTT-SSSCCCCHHHHHHTTCCEEEECSH
T ss_pred             hhhhcCHHHHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcC-CCeEEEeccC-CCCCCCCHHHHHHcCCeEEEEchH
Confidence            99888999999999999999999999999999999999999997 7999999997 789999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHc-CCCC-CCCCCCCHHHHHHhcCcccHHHHHHhhcccc
Q 012478          313 LIGVSVRAMQDALTAIKG-GRIP-SPGSMPSFQEIKETLGFNTYYEEEKRYATSM  365 (462)
Q Consensus       313 ll~aa~~Am~~~l~~l~~-g~~~-~~~~~~s~~e~~~lvg~~~~~~~e~~y~~~~  365 (462)
                      ++++++.||+++++.|++ |+.. ..+.|++|+|+++++||++|++++++|...+
T Consensus       242 ~~raa~~a~~~~~~~i~~~g~~~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~  296 (298)
T 3eoo_A          242 AYRAMNKAALNFYETVRRDGTQKAAVPTMQTRAQLYDYLGYYAYEEKLDQLFNQG  296 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSSGGGGGGSCCHHHHHHHTTHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHHHHcCCccchhhcCCCHHHHHHHcCHHHHHHHHHHHhccc
Confidence            999999999999999986 4443 4567889999999999999999999997543
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A Back     alignment and structure
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A Back     alignment and structure
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus} Back     alignment and structure
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A Back     alignment and structure
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A Back     alignment and structure
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa} Back     alignment and structure
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A* Back     alignment and structure
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A Back     alignment and structure
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei} Back     alignment and structure
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A Back     alignment and structure
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A Back     alignment and structure
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus} Back     alignment and structure
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7 Back     alignment and structure
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A Back     alignment and structure
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8 Back     alignment and structure
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A* Back     alignment and structure
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8 Back     alignment and structure
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9 Back     alignment and structure
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1 Back     alignment and structure
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A Back     alignment and structure
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0 Back     alignment and structure
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus} Back     alignment and structure
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp} Back     alignment and structure
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1 Back     alignment and structure
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661} Back     alignment and structure
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus} Back     alignment and structure
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A* Back     alignment and structure
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum} Back     alignment and structure
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A* Back     alignment and structure
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A* Back     alignment and structure
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A Back     alignment and structure
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A Back     alignment and structure
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0 Back     alignment and structure
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A* Back     alignment and structure
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis} Back     alignment and structure
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A Back     alignment and structure
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A Back     alignment and structure
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A Back     alignment and structure
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str} Back     alignment and structure
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0 Back     alignment and structure
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str} Back     alignment and structure
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A Back     alignment and structure
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A Back     alignment and structure
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A* Back     alignment and structure
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa} Back     alignment and structure
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A* Back     alignment and structure
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A Back     alignment and structure
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A* Back     alignment and structure
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis} Back     alignment and structure
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A Back     alignment and structure
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti} Back     alignment and structure
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5 Back     alignment and structure
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831} Back     alignment and structure
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae} Back     alignment and structure
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima} Back     alignment and structure
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A Back     alignment and structure
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A* Back     alignment and structure
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ... Back     alignment and structure
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A Back     alignment and structure
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A Back     alignment and structure
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0 Back     alignment and structure
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A Back     alignment and structure
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A* Back     alignment and structure
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A Back     alignment and structure
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A* Back     alignment and structure
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina} Back     alignment and structure
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A* Back     alignment and structure
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A Back     alignment and structure
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0 Back     alignment and structure
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae} Back     alignment and structure
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4 Back     alignment and structure
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Back     alignment and structure
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1 Back     alignment and structure
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5 Back     alignment and structure
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A Back     alignment and structure
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0 Back     alignment and structure
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A* Back     alignment and structure
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A* Back     alignment and structure
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ... Back     alignment and structure
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A* Back     alignment and structure
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A* Back     alignment and structure
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus} Back     alignment and structure
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A* Back     alignment and structure
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C* Back     alignment and structure
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str} Back     alignment and structure
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ... Back     alignment and structure
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A* Back     alignment and structure
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7 Back     alignment and structure
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1 Back     alignment and structure
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A Back     alignment and structure
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A* Back     alignment and structure
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii} Back     alignment and structure
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1 Back     alignment and structure
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A* Back     alignment and structure
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A* Back     alignment and structure
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A Back     alignment and structure
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 Back     alignment and structure
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A Back     alignment and structure
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A* Back     alignment and structure
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2 Back     alignment and structure
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens} Back     alignment and structure
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A* Back     alignment and structure
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A* Back     alignment and structure
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp} Back     alignment and structure
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A Back     alignment and structure
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1 Back     alignment and structure
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A* Back     alignment and structure
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1 Back     alignment and structure
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A* Back     alignment and structure
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis} Back     alignment and structure
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0 Back     alignment and structure
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ... Back     alignment and structure
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti} Back     alignment and structure
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A Back     alignment and structure
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0 Back     alignment and structure
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A* Back     alignment and structure
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40} Back     alignment and structure
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus} Back     alignment and structure
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A Back     alignment and structure
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A* Back     alignment and structure
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus} Back     alignment and structure
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ... Back     alignment and structure
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans} Back     alignment and structure
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A* Back     alignment and structure
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A* Back     alignment and structure
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP} Back     alignment and structure
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A Back     alignment and structure
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1 Back     alignment and structure
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A* Back     alignment and structure
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8} Back     alignment and structure
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP} Back     alignment and structure
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A* Back     alignment and structure
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A* Back     alignment and structure
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A Back     alignment and structure
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti} Back     alignment and structure
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens} Back     alignment and structure
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8 Back     alignment and structure
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii} Back     alignment and structure
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A* Back     alignment and structure
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A* Back     alignment and structure
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A* Back     alignment and structure
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix} Back     alignment and structure
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A* Back     alignment and structure
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A* Back     alignment and structure
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A* Back     alignment and structure
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A Back     alignment and structure
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1 Back     alignment and structure
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum} Back     alignment and structure
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis} Back     alignment and structure
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis} Back     alignment and structure
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A* Back     alignment and structure
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A* Back     alignment and structure
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A Back     alignment and structure
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A Back     alignment and structure
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5 Back     alignment and structure
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A* Back     alignment and structure
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A Back     alignment and structure
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti} Back     alignment and structure
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A Back     alignment and structure
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample} Back     alignment and structure
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A* Back     alignment and structure
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A* Back     alignment and structure
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana} Back     alignment and structure
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A* Back     alignment and structure
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A* Back     alignment and structure
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis} Back     alignment and structure
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A* Back     alignment and structure
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A Back     alignment and structure
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1 Back     alignment and structure
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A Back     alignment and structure
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A* Back     alignment and structure
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A Back     alignment and structure
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A* Back     alignment and structure
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} Back     alignment and structure
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1 Back     alignment and structure
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0 Back     alignment and structure
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified} Back     alignment and structure
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp} Back     alignment and structure
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B Back     alignment and structure
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus} Back     alignment and structure
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii} Back     alignment and structure
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A* Back     alignment and structure
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A* Back     alignment and structure
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A Back     alignment and structure
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A* Back     alignment and structure
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum} Back     alignment and structure
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A* Back     alignment and structure
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus} Back     alignment and structure
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A Back     alignment and structure
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A* Back     alignment and structure
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440} Back     alignment and structure
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C* Back     alignment and structure
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A* Back     alignment and structure
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum} Back     alignment and structure
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A* Back     alignment and structure
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa} Back     alignment and structure
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A Back     alignment and structure
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A Back     alignment and structure
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp} Back     alignment and structure
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A* Back     alignment and structure
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A* Back     alignment and structure
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7 Back     alignment and structure
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A* Back     alignment and structure
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A* Back     alignment and structure
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens} Back     alignment and structure
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A Back     alignment and structure
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A* Back     alignment and structure
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941} Back     alignment and structure
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1 Back     alignment and structure
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A* Back     alignment and structure
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti} Back     alignment and structure
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0 Back     alignment and structure
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum} Back     alignment and structure
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A* Back     alignment and structure
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A Back     alignment and structure
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A* Back     alignment and structure
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0 Back     alignment and structure
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1 Back     alignment and structure
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A Back     alignment and structure
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1 Back     alignment and structure
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus} Back     alignment and structure
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779} Back     alignment and structure
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A* Back     alignment and structure
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A Back     alignment and structure
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A Back     alignment and structure
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A* Back     alignment and structure
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A Back     alignment and structure
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium} Back     alignment and structure
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana} Back     alignment and structure
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A* Back     alignment and structure
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8 Back     alignment and structure
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri} Back     alignment and structure
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1 Back     alignment and structure
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans} Back     alignment and structure
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A* Back     alignment and structure
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A* Back     alignment and structure
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1 Back     alignment and structure
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis} Back     alignment and structure
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum} Back     alignment and structure
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides} Back     alignment and structure
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A* Back     alignment and structure
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A* Back     alignment and structure
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis} Back     alignment and structure
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1 Back     alignment and structure
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A* Back     alignment and structure
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A Back     alignment and structure
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4 Back     alignment and structure
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A* Back     alignment and structure
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A* Back     alignment and structure
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae} Back     alignment and structure
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa} Back     alignment and structure
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A* Back     alignment and structure
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199} Back     alignment and structure
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus} Back     alignment and structure
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A* Back     alignment and structure
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A* Back     alignment and structure
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A Back     alignment and structure
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A* Back     alignment and structure
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum} Back     alignment and structure
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A* Back     alignment and structure
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ... Back     alignment and structure
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A* Back     alignment and structure
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae} Back     alignment and structure
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A Back     alignment and structure
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans} Back     alignment and structure
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica} Back     alignment and structure
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A* Back     alignment and structure
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis} Back     alignment and structure
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A Back     alignment and structure
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A* Back     alignment and structure
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A Back     alignment and structure
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A* Back     alignment and structure
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii} Back     alignment and structure
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp} Back     alignment and structure
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A* Back     alignment and structure
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A Back     alignment and structure
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A Back     alignment and structure
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus} Back     alignment and structure
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D* Back     alignment and structure
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1 Back     alignment and structure
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A Back     alignment and structure
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1 Back     alignment and structure
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A Back     alignment and structure
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A Back     alignment and structure
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A* Back     alignment and structure
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp} Back     alignment and structure
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5 Back     alignment and structure
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A* Back     alignment and structure
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A Back     alignment and structure
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 Back     alignment and structure
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A Back     alignment and structure
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp} Back     alignment and structure
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1 Back     alignment and structure
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O Back     alignment and structure
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani} Back     alignment and structure
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A* Back     alignment and structure
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum} Back     alignment and structure
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0 Back     alignment and structure
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica} Back     alignment and structure
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1 Back     alignment and structure
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A* Back     alignment and structure
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A* Back     alignment and structure
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A* Back     alignment and structure
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A* Back     alignment and structure
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A Back     alignment and structure
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3 Back     alignment and structure
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans} Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Back     alignment and structure
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ... Back     alignment and structure
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440} Back     alignment and structure
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A* Back     alignment and structure
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A Back     alignment and structure
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Back     alignment and structure
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A Back     alignment and structure
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A* Back     alignment and structure
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1 Back     alignment and structure
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A Back     alignment and structure
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A* Back     alignment and structure
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens} Back     alignment and structure
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A* Back     alignment and structure
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1 Back     alignment and structure
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae} Back     alignment and structure
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis} Back     alignment and structure
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis} Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Back     alignment and structure
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A* Back     alignment and structure
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B* Back     alignment and structure
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti} Back     alignment and structure
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A Back     alignment and structure
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A* Back     alignment and structure
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus} Back     alignment and structure
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1 Back     alignment and structure
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0 Back     alignment and structure
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A* Back     alignment and structure
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A Back     alignment and structure
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A* Back     alignment and structure
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A* Back     alignment and structure
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2 Back     alignment and structure
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A Back     alignment and structure
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A* Back     alignment and structure
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A Back     alignment and structure
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A* Back     alignment and structure
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8} Back     alignment and structure
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A* Back     alignment and structure
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1 Back     alignment and structure
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A* Back     alignment and structure
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A Back     alignment and structure
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis} Back     alignment and structure
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54} Back     alignment and structure
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str} Back     alignment and structure
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A Back     alignment and structure
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus} Back     alignment and structure
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A* Back     alignment and structure
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis} Back     alignment and structure
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp} Back     alignment and structure
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5 Back     alignment and structure
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A* Back     alignment and structure
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1 Back     alignment and structure
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A Back     alignment and structure
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A* Back     alignment and structure
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A* Back     alignment and structure
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A* Back     alignment and structure
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A* Back     alignment and structure
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A Back     alignment and structure
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP} Back     alignment and structure
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus} Back     alignment and structure
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A* Back     alignment and structure
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A* Back     alignment and structure
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A* Back     alignment and structure
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A Back     alignment and structure
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0 Back     alignment and structure
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A* Back     alignment and structure
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str} Back     alignment and structure
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A Back     alignment and structure
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A* Back     alignment and structure
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP} Back     alignment and structure
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A* Back     alignment and structure
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified} Back     alignment and structure
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus} Back     alignment and structure
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A Back     alignment and structure
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp} Back     alignment and structure
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3 Back     alignment and structure
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis} Back     alignment and structure
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ... Back     alignment and structure
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2 Back     alignment and structure
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A Back     alignment and structure
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A Back     alignment and structure
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A* Back     alignment and structure
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A Back     alignment and structure
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans} Back     alignment and structure
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A* Back     alignment and structure
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1 Back     alignment and structure
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A Back     alignment and structure
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3} Back     alignment and structure
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A Back     alignment and structure
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A* Back     alignment and structure
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A Back     alignment and structure
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A* Back     alignment and structure
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A* Back     alignment and structure
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A Back     alignment and structure
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2 Back     alignment and structure
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1 Back     alignment and structure
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A Back     alignment and structure
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ... Back     alignment and structure
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A* Back     alignment and structure
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A* Back     alignment and structure
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7 Back     alignment and structure
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A* Back     alignment and structure
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A Back     alignment and structure
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae} Back     alignment and structure
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A* Back     alignment and structure
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A Back     alignment and structure
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1 Back     alignment and structure
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A Back     alignment and structure
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B* Back     alignment and structure
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5 Back     alignment and structure
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A* Back     alignment and structure
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1 Back     alignment and structure
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A Back     alignment and structure
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei} Back     alignment and structure
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A* Back     alignment and structure
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A* Back     alignment and structure
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans} Back     alignment and structure
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A Back     alignment and structure
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A* Back     alignment and structure
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp} Back     alignment and structure
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A Back     alignment and structure
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina} Back     alignment and structure
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941} Back     alignment and structure
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2 Back     alignment and structure
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0 Back     alignment and structure
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1 Back     alignment and structure
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A* Back     alignment and structure
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A Back     alignment and structure
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A* Back     alignment and structure
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni} Back     alignment and structure
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A Back     alignment and structure
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus} Back     alignment and structure
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A Back     alignment and structure
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A Back     alignment and structure
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A Back     alignment and structure
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A Back     alignment and structure
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A Back     alignment and structure
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A Back     alignment and structure
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49} Back     alignment and structure
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A Back     alignment and structure
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A* Back     alignment and structure
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A* Back     alignment and structure
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A* Back     alignment and structure
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A* Back     alignment and structure
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii} Back     alignment and structure
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae} Back     alignment and structure
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A* Back     alignment and structure
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A* Back     alignment and structure
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6 Back     alignment and structure
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4 Back     alignment and structure
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei} Back     alignment and structure
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica} Back     alignment and structure
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A Back     alignment and structure
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum} Back     alignment and structure
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima} Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Back     alignment and structure
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ... Back     alignment and structure
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C* Back     alignment and structure
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1 Back     alignment and structure
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1 Back     alignment and structure
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A* Back     alignment and structure
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus} Back     alignment and structure
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1 Back     alignment and structure
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A Back     alignment and structure
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa} Back     alignment and structure
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A Back     alignment and structure
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei} Back     alignment and structure
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A Back     alignment and structure
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia} Back     alignment and structure
>3qfw_A Ribulose-1,5-bisphosphate carboxylase/oxygenase L subunit; structural genomics, PSI-2, protein structure initiative; 1.79A {Rhodopseudomonas palustris} Back     alignment and structure
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0 Back     alignment and structure
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A Back     alignment and structure
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0 Back     alignment and structure
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0 Back     alignment and structure
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp} Back     alignment and structure
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A* Back     alignment and structure
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 462
d1muma_289 c.1.12.7 (A:) 2-methylisocitrate lyase {Escherichi 4e-73
d1f61a_418 c.1.12.7 (A:) Isocitrate lyase {Mycobacterium tube 2e-61
d1igwa_416 c.1.12.7 (A:) Isocitrate lyase {Escherichia coli [ 5e-53
d1s2wa_275 c.1.12.7 (A:) Phosphoenolpyruvate mutase {Blue mus 1e-51
d2p10a1197 c.1.12.9 (A:8-204) Uncharacterized protein Mll9387 8e-43
d1dqua_519 c.1.12.7 (A:) Isocitrate lyase {Aspergillus nidula 7e-37
>d1muma_ c.1.12.7 (A:) 2-methylisocitrate lyase {Escherichia coli [TaxId: 562]} Length = 289 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Phosphoenolpyruvate/pyruvate domain
family: Phosphoenolpyruvate mutase/Isocitrate lyase-like
domain: 2-methylisocitrate lyase
species: Escherichia coli [TaxId: 562]

 Score =  230 bits (587), Expect = 4e-73
 Identities = 98/291 (33%), Positives = 157/291 (53%), Gaps = 8/291 (2%)

Query: 76  SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISY 135
           SP K+ R  L      Q     +A  A L +++G+   + SG  ++A  L LPD G  + 
Sbjct: 3   SPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTL 62

Query: 136 GEMVDQGQLITQAVSIPVIGDGDNGYGNA-MNVKRTVKGYIKAGFAGIILEDQVSPKGCG 194
            +++   + IT   S+P++ D D G+G++  NV RTVK  IKAG AG+ +EDQV  K CG
Sbjct: 63  DDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRCG 122

Query: 195 HTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSRQALSLEESLRRSRAFADAGA 254
           H   + +VS+EE V RI+AAVDA+     D VI+ARTD+     L+ ++ R++A+ +AGA
Sbjct: 123 HRPNKAIVSKEEMVDRIRAAVDAKT--DPDFVIMARTDALAVEGLDAAIERAQAYVEAGA 180

Query: 255 DVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLI 314
           ++LF +A+      + F +    VP +AN+ E  G TP+    EL      +  YPLS  
Sbjct: 181 EMLFPEAITELAMYRQFADAVQ-VPILANITE-FGATPLFTTDELRSAHVAMALYPLSAF 238

Query: 315 GVSVRAMQDALTAIK--GGRIPSPGSMPSFQEIKETLGFNTYYEE-EKRYA 362
               RA +     ++  G +     +M +  E+ E++ +  Y E+ +  +A
Sbjct: 239 RAMNRAAEHVYNVLRQEGTQKSVIDTMQTRNELYESINYYQYEEKLDNLFA 289
>d1f61a_ c.1.12.7 (A:) Isocitrate lyase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 418 Back     information, alignment and structure
>d1igwa_ c.1.12.7 (A:) Isocitrate lyase {Escherichia coli [TaxId: 562]} Length = 416 Back     information, alignment and structure
>d1s2wa_ c.1.12.7 (A:) Phosphoenolpyruvate mutase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 275 Back     information, alignment and structure
>d2p10a1 c.1.12.9 (A:8-204) Uncharacterized protein Mll9387 {Mesorhizobium loti [TaxId: 381]} Length = 197 Back     information, alignment and structure
>d1dqua_ c.1.12.7 (A:) Isocitrate lyase {Aspergillus nidulans [TaxId: 162425]} Length = 519 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query462
d1muma_289 2-methylisocitrate lyase {Escherichia coli [TaxId: 100.0
d1f61a_418 Isocitrate lyase {Mycobacterium tuberculosis [TaxI 100.0
d1igwa_416 Isocitrate lyase {Escherichia coli [TaxId: 562]} 100.0
d1s2wa_275 Phosphoenolpyruvate mutase {Blue mussel (Mytilus e 100.0
d1dqua_519 Isocitrate lyase {Aspergillus nidulans [TaxId: 162 100.0
d2p10a1197 Uncharacterized protein Mll9387 {Mesorhizobium lot 100.0
d1m3ua_262 Ketopantoate hydroxymethyltransferase PanB {Escher 99.92
d1oy0a_262 Ketopantoate hydroxymethyltransferase PanB {Mycoba 99.9
d1o66a_260 Ketopantoate hydroxymethyltransferase PanB {Neisse 99.89
d1xxxa1296 Dihydrodipicolinate synthase {Mycobacterium tuberc 97.42
d1o5ka_295 Dihydrodipicolinate synthase {Thermotoga maritima 97.36
d1hl2a_295 N-acetylneuraminate lyase {Escherichia coli [TaxId 97.35
d1xkya1292 Dihydrodipicolinate synthase {Bacillus anthracis [ 97.34
d1izca_299 Macrophomate synthase {Macrophoma commelinae [TaxI 97.21
d2a6na1292 Dihydrodipicolinate synthase {Escherichia coli [Ta 97.05
d1m3ua_262 Ketopantoate hydroxymethyltransferase PanB {Escher 96.97
d1f74a_293 N-acetylneuraminate lyase {Haemophilus influenzae 96.91
d1w3ia_293 2-keto-3-deoxy gluconate aldolase Eda {Sulfolobus 96.79
d1dxea_253 2-dehydro-3-deoxy-galactarate aldolase {Escherichi 96.56
d1rvka1255 Hypothetical protein Atu3453 {Agrobacterium tumefa 96.49
d1xm3a_251 Thiazole biosynthesis protein ThiG {Bacillus subti 96.37
d1gvfa_284 Tagatose-1,6-bisphosphate aldolase {Escherichia co 96.2
d1yxya1230 Putative N-acetylmannosamine-6-phosphate 2-epimera 96.18
d1vr6a1338 3-deoxy-D-arabino-heptulosonate-7-phosphate syntha 96.17
d1gtea2312 Dihydropyrimidine dehydrogenase, domain 4 {Pig (Su 95.88
d1y0ea_222 Putative N-acetylmannosamine-6-phosphate 2-epimera 95.79
d1jpma1234 L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: 95.64
d1o66a_260 Ketopantoate hydroxymethyltransferase PanB {Neisse 95.55
d2gl5a1278 Putative dehydratase protein STM2273 {Salmonella t 95.12
d1yxya1230 Putative N-acetylmannosamine-6-phosphate 2-epimera 94.87
d1wv2a_243 Thiazole biosynthesis protein ThiG {Pseudomonas ae 94.73
d2chra1244 Chlormuconate cycloisomerase {Alcaligenes eutrophu 94.63
d2tpsa_226 Thiamin phosphate synthase {Bacillus subtilis [Tax 94.61
d1vrda1330 Inosine monophosphate dehydrogenase (IMPDH) {Therm 94.53
d1h7na_340 5-aminolaevulinate dehydratase, ALAD (porphobilino 94.48
d1tzza1247 Hypothetical protein Bll6730 {Bradyrhizobium japon 94.37
d1xi3a_206 Thiamin phosphate synthase {Archaeon (Pyrococcus f 94.13
d1ps9a1330 2,4-dienoyl-CoA reductase, N-terminal domain {Esch 94.01
d1xm3a_251 Thiazole biosynthesis protein ThiG {Bacillus subti 94.01
d1jr1a1378 Inosine monophosphate dehydrogenase (IMPDH) {Chine 93.76
d1yeya1252 RTS beta protein {Xanthomonas campestris pv. campe 93.74
d1ojxa_251 Archaeal fructose 1,6-bisphosphate aldolase {Archa 93.57
d1gtea2312 Dihydropyrimidine dehydrogenase, domain 4 {Pig (Su 93.49
d1y0ea_222 Putative N-acetylmannosamine-6-phosphate 2-epimera 93.29
d1oy0a_262 Ketopantoate hydroxymethyltransferase PanB {Mycoba 93.13
d1geha1307 Ribulose 1,5-bisphosphate carboxylase-oxygenase {A 93.09
d1zfja1365 Inosine monophosphate dehydrogenase (IMPDH) {Strep 92.98
d1z41a1337 NADPH dehydrogenase NamA {Bacillus subtilis [TaxId 92.65
d1lt7a_361 Betaine-homocysteine S-methyltransferase {Human (H 92.64
d2mnra1227 Mandelate racemase {Pseudomonas putida [TaxId: 303 92.58
d1twda_247 Copper homeostasis protein CutC {Shigella flexneri 92.55
d1muca1242 Muconate-lactonizing enzyme {Pseudomonas putida [T 92.53
d1rvga_305 Fructose-bisphosphate aldolase (FBP aldolase) {The 92.45
d1jfla1115 Aspartate racemase {Archaeon Pyrococcus horikoshii 92.39
d1z41a1337 NADPH dehydrogenase NamA {Bacillus subtilis [TaxId 92.19
d1gzga_329 5-aminolaevulinate dehydratase, ALAD (porphobilino 91.98
d1eepa_388 Inosine monophosphate dehydrogenase (IMPDH) {Lyme 91.78
d1nu5a1243 Chlormuconate cycloisomerase {Pseudomonas sp. p51 91.63
d1vhna_305 Putative flavin oxidoreducatase TM0096 {Thermotoga 91.38
d2gdqa1256 Hypothetical protein YitF {Bacillus subtilis [TaxI 91.3
d1izca_299 Macrophomate synthase {Macrophoma commelinae [TaxI 91.06
d1pv8a_320 5-aminolaevulinate dehydratase, ALAD (porphobilino 91.03
d1pvna1362 Inosine monophosphate dehydrogenase (IMPDH) {Tritr 90.85
d3bofa2300 Cobalamin-dependent methionine synthase MetH, N-te 90.22
d1l6sa_323 5-aminolaevulinate dehydratase, ALAD (porphobilino 90.18
d2c1ha1319 5-aminolaevulinate dehydratase, ALAD (porphobilino 90.15
d1wdda1325 Ribulose 1,5-bisphosphate carboxylase-oxygenase {R 89.81
d1ps9a1330 2,4-dienoyl-CoA reductase, N-terminal domain {Esch 89.33
d1qapa1167 Quinolinic acid phosphoribosyltransferase (Nicotin 89.32
d2d69a1291 Ribulose 1,5-bisphosphate carboxylase-oxygenase {A 89.11
d1lt7a_361 Betaine-homocysteine S-methyltransferase {Human (H 88.97
d1twda_247 Copper homeostasis protein CutC {Shigella flexneri 88.91
d1p0ka_329 Isopentenyl-diphosphate delta-isomerase {Bacillus 88.4
d1dxea_253 2-dehydro-3-deoxy-galactarate aldolase {Escherichi 88.34
d1q6oa_213 3-keto-L-gulonate 6-phosphate decarboxylase {Esche 88.3
d2a21a1263 3-deoxy-D-manno-octulosonate 8-phosphate synthase 88.3
d1qwga_251 (2r)-phospho-3-sulfolactate synthase ComA {Archaeo 88.19
d1km4a_212 Orotidine 5'-monophosphate decarboxylase (OMP deca 87.49
d1a53a_247 Indole-3-glycerophosphate synthase, IPGS {Archaeon 87.43
d1p0ka_329 Isopentenyl-diphosphate delta-isomerase {Bacillus 86.67
d1qpoa1169 Quinolinic acid phosphoribosyltransferase (Nicotin 86.51
d1rd5a_261 Trp synthase alpha-subunit {Maize (Zea mays) [TaxI 86.38
d1wv2a_243 Thiazole biosynthesis protein ThiG {Pseudomonas ae 86.33
d1n7ka_234 Deoxyribose-phosphate aldolase DeoC {Archaeon Aero 86.15
d1xkya1292 Dihydrodipicolinate synthase {Bacillus anthracis [ 85.99
d1ub3a_211 Deoxyribose-phosphate aldolase DeoC {Thermus therm 85.99
d1ykwa1283 Ribulose 1,5-bisphosphate carboxylase-oxygenase {C 85.84
d1jpdx1208 L-Ala-D/L-Glu epimerase {Escherichia coli [TaxId: 85.84
d1ep3a_311 Dihydroorotate dehydrogenase {Lactococcus lactis, 85.76
d1mzha_225 Deoxyribose-phosphate aldolase DeoC {Aquifex aeoli 85.55
d1mxsa_216 KDPG aldolase {Pseudomonas putida [TaxId: 303]} 85.23
d1bwva1328 Ribulose 1,5-bisphosphate carboxylase-oxygenase {G 84.97
d1geqa_248 Trp synthase alpha-subunit {Archaeon Pyrococcus fu 84.87
d1dosa_358 Fructose-bisphosphate aldolase (FBP aldolase) {Esc 84.74
d1sjda1242 N-acylamino acid racemase {Amycolatopsis sp. [TaxI 84.41
d1vyra_363 Pentaerythritol tetranirate reductase {Enterobacte 83.81
d1zfja1365 Inosine monophosphate dehydrogenase (IMPDH) {Strep 83.3
d1o0ya_251 Deoxyribose-phosphate aldolase DeoC {Thermotoga ma 82.39
d1xi3a_206 Thiamin phosphate synthase {Archaeon (Pyrococcus f 80.87
d1o5ka_295 Dihydrodipicolinate synthase {Thermotoga maritima 80.68
d1tb3a1349 Hydroxyacid oxidase {Rat (Rattus norvegicus) [TaxI 80.62
d2tpsa_226 Thiamin phosphate synthase {Bacillus subtilis [Tax 80.17
>d1muma_ c.1.12.7 (A:) 2-methylisocitrate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Phosphoenolpyruvate/pyruvate domain
family: Phosphoenolpyruvate mutase/Isocitrate lyase-like
domain: 2-methylisocitrate lyase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-72  Score=559.00  Aligned_cols=283  Identities=35%  Similarity=0.557  Sum_probs=268.5

Q ss_pred             chHHHHHHHHhCCCceEecccCChHHHHHHHHhCCcEEEeccHHHHhhhccCCCCCCCCHHHHHHHHHHHHhhcCCcEEE
Q 012478           76 SPAKSLRQILELPGVHQGPACFDALSAKLVEKSGFSFCFTSGFSISAARLALPDTGFISYGEMVDQGQLITQAVSIPVIG  155 (462)
Q Consensus        76 ~~a~~LR~ll~~~~~iv~p~ayDalSArl~e~aGfdaI~vSG~avSas~lG~PD~g~vsl~Eml~~~~~I~ra~~iPVIa  155 (462)
                      +++++||++|+.++++++||+||++||+++|++||+++|+||+++|++++|+||.+++|++||++++++|++++++||||
T Consensus         3 ~~~~~lr~ll~~~~~~~~~~~~D~~sA~~~e~~Gf~a~~~sg~~~sa~~~G~pD~~~~~~~e~~~~~~~i~~a~~~Pvi~   82 (289)
T d1muma_           3 SPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLV   82 (289)
T ss_dssp             CHHHHHHHHHHHCSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTSCCCSSSCCCHHHHHHHHHHHHHHCCSCEEE
T ss_pred             CHHHHHHHHHhCCCCEEeecCCCHHHHHHHHHcCCCEEEhhHHHHHHHccCCCCCCCCChHHHHHHHHHHhcccCCCeee
Confidence            57899999999999999999999999999999999999999999998789999999999999999999999999999999


Q ss_pred             eCCCCCCC-HHHHHHHHHHHHHhCccEEEeCCCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHhhCCCeEEEEecchh
Q 012478          156 DGDNGYGN-AMNVKRTVKGYIKAGFAGIILEDQVSPKGCGHTRGRKVVSREEAVMRIKAAVDARKESGSDIVIVARTDSR  234 (462)
Q Consensus       156 D~DtGyG~-~~nv~rtVk~l~~AGaaGI~IEDq~~PKrCGH~~gk~Lvp~ee~~~kI~AA~~Ar~~~g~d~vIiARTDA~  234 (462)
                      |+|+|||+ ++||+++|++|+++||+|||||||.+||+|||.++|.++|.+|++.||+||++++.  ++||+|+||||++
T Consensus        83 D~d~GyG~~~~~v~~~v~~~~~aGvagi~iEDq~~pk~~g~~~~~~~~~~~e~~~ki~aa~~a~~--~~d~~IiARTDa~  160 (289)
T d1muma_          83 DADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDAKT--DPDFVIMARTDAL  160 (289)
T ss_dssp             ECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCCCSSTTCCSCCCBCCHHHHHHHHHHHHHTCS--STTSEEEEEECCH
T ss_pred             cccccccccchHHHHHHHHHHHCCCCEEEecCcccccccccccccceecHHHHHHHHHHHHHhcC--Ccchhheeccccc
Confidence            99999997 68999999999999999999999999999999999999999999999999999987  4899999999999


Q ss_pred             hcccHHHHHHHHHHhHhcCCcEEEecCCCCHHHHHHHHHhCCCCceeeeeeecCCCCCCCCHHHHHhcCCCEEeccchHH
Q 012478          235 QALSLEESLRRSRAFADAGADVLFIDALASKEEMKAFCEISPLVPKMANMLEGGGKTPILNPLELEELGFKLVAYPLSLI  314 (462)
Q Consensus       235 ~~~gldeAI~RakAy~eAGAD~Ifie~~~s~eei~~i~~~v~~vP~~~N~l~~~g~tP~ls~~eL~~lGv~~V~yp~~ll  314 (462)
                      ...+++|||+|+++|.+||||+||++++.+.++++++++.++ .|+++|++++ +++|.++.+||.++||++++||++++
T Consensus       161 ~~~g~~eAi~R~~aY~eAGAD~vf~~~~~~~~~~~~~~~~~~-~Pl~~~~~~~-~~~p~~s~~eL~~~Gv~~v~~~~~~~  238 (289)
T d1muma_         161 AVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQ-VPILANITEF-GATPLFTTDELRSAHVAMALYPLSAF  238 (289)
T ss_dssp             HHHCHHHHHHHHHHHHHTTCSEEEETTCCCHHHHHHHHHHHC-SCBEEECCSS-SSSCCCCHHHHHHTTCSEEEESSHHH
T ss_pred             cccCHHHHHHHHHHhhhcCCcEEEecCCCCHHHHHHHHHhcC-CCEEEeecCc-CCCccchHHHHHHhccceEEechHHH
Confidence            989999999999999999999999999999999999999997 6999999986 78999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHc-CCC-CCCCCCCCHHHHHHhcCcccHHH-HHHhhc
Q 012478          315 GVSVRAMQDALTAIKG-GRI-PSPGSMPSFQEIKETLGFNTYYE-EEKRYA  362 (462)
Q Consensus       315 ~aa~~Am~~~l~~l~~-g~~-~~~~~~~s~~e~~~lvg~~~~~~-~e~~y~  362 (462)
                      +++++||++.++.|++ |.. ...+.|.+++|+++++||++|++ ++++|+
T Consensus       239 ~aa~~a~~~~~~~l~~~G~~~~~~~~m~~~~el~~l~g~~~~ee~~~~~~a  289 (289)
T d1muma_         239 RAMNRAAEHVYNVLRQEGTQKSVIDTMQTRNELYESINYYQYEEKLDNLFA  289 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHSSSGGGGGGSCCHHHHHHHTTTHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHcCCcccchhcccCHHHHHHhcCHHHHHHHHHhhcC
Confidence            9999999999999986 443 34567889999999999999987 688774
>d1f61a_ c.1.12.7 (A:) Isocitrate lyase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1igwa_ c.1.12.7 (A:) Isocitrate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1s2wa_ c.1.12.7 (A:) Phosphoenolpyruvate mutase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1dqua_ c.1.12.7 (A:) Isocitrate lyase {Aspergillus nidulans [TaxId: 162425]} Back     information, alignment and structure
>d2p10a1 c.1.12.9 (A:8-204) Uncharacterized protein Mll9387 {Mesorhizobium loti [TaxId: 381]} Back     information, alignment and structure
>d1m3ua_ c.1.12.8 (A:) Ketopantoate hydroxymethyltransferase PanB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1oy0a_ c.1.12.8 (A:) Ketopantoate hydroxymethyltransferase PanB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1o66a_ c.1.12.8 (A:) Ketopantoate hydroxymethyltransferase PanB {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1xxxa1 c.1.10.1 (A:5-300) Dihydrodipicolinate synthase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1o5ka_ c.1.10.1 (A:) Dihydrodipicolinate synthase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1hl2a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xkya1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d1izca_ c.1.12.5 (A:) Macrophomate synthase {Macrophoma commelinae [TaxId: 108330]} Back     information, alignment and structure
>d2a6na1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m3ua_ c.1.12.8 (A:) Ketopantoate hydroxymethyltransferase PanB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f74a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1w3ia_ c.1.10.1 (A:) 2-keto-3-deoxy gluconate aldolase Eda {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rvka1 c.1.11.2 (A:127-381) Hypothetical protein Atu3453 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1gvfa_ c.1.10.2 (A:) Tagatose-1,6-bisphosphate aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1yxya1 c.1.2.5 (A:4-233) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1vr6a1 c.1.10.4 (A:1-338) 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1gtea2 c.1.4.1 (A:533-844) Dihydropyrimidine dehydrogenase, domain 4 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1y0ea_ c.1.2.5 (A:) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1jpma1 c.1.11.2 (A:126-359) L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1o66a_ c.1.12.8 (A:) Ketopantoate hydroxymethyltransferase PanB {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d2gl5a1 c.1.11.2 (A:123-400) Putative dehydratase protein STM2273 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1yxya1 c.1.2.5 (A:4-233) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1wv2a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2chra1 c.1.11.2 (A:127-370) Chlormuconate cycloisomerase {Alcaligenes eutrophus [TaxId: 106590]} Back     information, alignment and structure
>d2tpsa_ c.1.3.1 (A:) Thiamin phosphate synthase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vrda1 c.1.5.1 (A:1-85,A:213-457) Inosine monophosphate dehydrogenase (IMPDH) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1h7na_ c.1.10.3 (A:) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1tzza1 c.1.11.2 (A:1146-1392) Hypothetical protein Bll6730 {Bradyrhizobium japonicum [TaxId: 375]} Back     information, alignment and structure
>d1xi3a_ c.1.3.1 (A:) Thiamin phosphate synthase {Archaeon (Pyrococcus furiosus) [TaxId: 2261]} Back     information, alignment and structure
>d1ps9a1 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate dehydrogenase (IMPDH) {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d1yeya1 c.1.11.2 (A:184-435) RTS beta protein {Xanthomonas campestris pv. campestris [TaxId: 340]} Back     information, alignment and structure
>d1ojxa_ c.1.10.1 (A:) Archaeal fructose 1,6-bisphosphate aldolase {Archaeon Thermoproteus tenax [TaxId: 2271]} Back     information, alignment and structure
>d1gtea2 c.1.4.1 (A:533-844) Dihydropyrimidine dehydrogenase, domain 4 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1y0ea_ c.1.2.5 (A:) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1oy0a_ c.1.12.8 (A:) Ketopantoate hydroxymethyltransferase PanB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1geha1 c.1.14.1 (A:137-443) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Archaeon Thermococcus kodakaraensis [TaxId: 311400]} Back     information, alignment and structure
>d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1z41a1 c.1.4.1 (A:2-338) NADPH dehydrogenase NamA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1lt7a_ c.1.26.1 (A:) Betaine-homocysteine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2mnra1 c.1.11.2 (A:133-359) Mandelate racemase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1muca1 c.1.11.2 (A:131-372) Muconate-lactonizing enzyme {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1rvga_ c.1.10.2 (A:) Fructose-bisphosphate aldolase (FBP aldolase) {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1jfla1 c.78.2.1 (A:1-115) Aspartate racemase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1z41a1 c.1.4.1 (A:2-338) NADPH dehydrogenase NamA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1gzga_ c.1.10.3 (A:) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Back     information, alignment and structure
>d1nu5a1 c.1.11.2 (A:127-369) Chlormuconate cycloisomerase {Pseudomonas sp. p51 [TaxId: 65067]} Back     information, alignment and structure
>d1vhna_ c.1.4.1 (A:) Putative flavin oxidoreducatase TM0096 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2gdqa1 c.1.11.2 (A:119-374) Hypothetical protein YitF {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1izca_ c.1.12.5 (A:) Macrophomate synthase {Macrophoma commelinae [TaxId: 108330]} Back     information, alignment and structure
>d1pv8a_ c.1.10.3 (A:) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId: 5724]} Back     information, alignment and structure
>d3bofa2 c.1.26.1 (A:1-300) Cobalamin-dependent methionine synthase MetH, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1l6sa_ c.1.10.3 (A:) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2c1ha1 c.1.10.3 (A:10-328) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Prosthecochloris vibrioformis [TaxId: 1098]} Back     information, alignment and structure
>d1wdda1 c.1.14.1 (A:151-475) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1ps9a1 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qapa1 c.1.17.1 (A:130-296) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2d69a1 c.1.14.1 (A:134-424) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1lt7a_ c.1.26.1 (A:) Betaine-homocysteine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1p0ka_ c.1.4.1 (A:) Isopentenyl-diphosphate delta-isomerase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q6oa_ c.1.2.3 (A:) 3-keto-L-gulonate 6-phosphate decarboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2a21a1 c.1.10.4 (A:1002-1264) 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1qwga_ c.1.27.1 (A:) (2r)-phospho-3-sulfolactate synthase ComA {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1km4a_ c.1.2.3 (A:) Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1a53a_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1p0ka_ c.1.4.1 (A:) Isopentenyl-diphosphate delta-isomerase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1qpoa1 c.1.17.1 (A:117-285) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1rd5a_ c.1.2.4 (A:) Trp synthase alpha-subunit {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1wv2a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1n7ka_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Archaeon Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1xkya1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d1ub3a_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ykwa1 c.1.14.1 (A:146-428) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Chlorobium tepidum [TaxId: 1097]} Back     information, alignment and structure
>d1jpdx1 c.1.11.2 (X:114-321) L-Ala-D/L-Glu epimerase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ep3a_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Lactococcus lactis, isozyme B [TaxId: 1358]} Back     information, alignment and structure
>d1mzha_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1bwva1 c.1.14.1 (A:150-478) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Galdieria partita [TaxId: 83374]} Back     information, alignment and structure
>d1geqa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1dosa_ c.1.10.2 (A:) Fructose-bisphosphate aldolase (FBP aldolase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sjda1 c.1.11.2 (A:126-367) N-acylamino acid racemase {Amycolatopsis sp. [TaxId: 37632]} Back     information, alignment and structure
>d1vyra_ c.1.4.1 (A:) Pentaerythritol tetranirate reductase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1o0ya_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1xi3a_ c.1.3.1 (A:) Thiamin phosphate synthase {Archaeon (Pyrococcus furiosus) [TaxId: 2261]} Back     information, alignment and structure
>d1o5ka_ c.1.10.1 (A:) Dihydrodipicolinate synthase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1tb3a1 c.1.4.1 (A:1-349) Hydroxyacid oxidase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2tpsa_ c.1.3.1 (A:) Thiamin phosphate synthase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure