Citrus Sinensis ID: 012485


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460--
MEALLRPRIMLSLTIILIPIFLFISGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAATGKKKKKTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVEPTDRAGNELKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTVVVLEKKNVVPVHNIPFQVTFSPVLPLHFLSIDFIIFVSVLLGTFCVSGMI
ccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEEcccccEEEEEEEEEEEcccccccEEEEEccccccccEEEEEEEEcccccccccEEEEccccccccccccccEEEEEEEccccccccEEEEEEEEEEccccccccccccccccEEEEEEEccEEccccEEcEEEEEEEEccccEEEEcccccccccccEEEEcccccccccccccEEEEEEcccccEEEEEEEEEEEEEEEEEEEEEEEEEEEEccccccccccccccccccccccccccEEEccccccccccEEEEccccEEEEEEEEEccccEEEEEEEEccccccccEEEEEEEEcccccccEEEcccccEEEEEEEccccccEEEEEEEEEEEccccccccEEEccccEEEEEEEEEEEEEccccEEEEEEEccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHcccc
ccHHHHHHHHHHHHHHHHHHHHHHHHHcccHcEEccEEEEEEccccEEEEEEEEEEEEcccccccEEEEEccHHHHcccEEEEEEEcccccccccEEEEEEEEEEEccccccEEEEEEEcccccccccEEEEEEEEEEEcccccccHHccccccEEEEEEcccccccccccEEEEEEEEEcccccccccccccccccccEEEEcccccccccccccEEEEEEccccEEEEEEEEEEEEEEccccEEEEEEEEEEcccccccccccEEEHHcccccccccHHHHEEcccccccccEEEEEEEccEEcccEccccccEEEEEEccccccccccccEEEEEEcccHHHHHHccccccEEEEEEcccccccEEEEEEEEEEEEcccccEEEEEccccccccccEEEEEEEccccEEEEEEEccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHcccccccc
meallrprIMLSLTIILIPIFLfisgasshqIRINNAERRIDLSTHIVKVFLTLKventgktsaseillafpptqvDHLAFLEALAATGKKKKKTYVSLavkptqlpdapnetnyYTIVLanplntgetATLEILYILThslepfpveisqsesqlvyyrdsalilspyhikqqttfikipsnkvesftrveptdragnelkygpyedrppysyspllvhfennnpfSVVEELVREVEIshwgnlqiTEQYKLAHAgarhkgifsrvdyqskptfsgvsSFKHLLarlpprvhsvyyrdeignistshlradswkiseleiepryplfggwratfvigyglpledflfessdgrrylnftfgcpLVETVVDKLTIkvvlpegakgpsavvpfpveqrletkysyLDVVGRTVVVLEkknvvpvhnipfqvtfspvlplhflsIDFIIFVSVLLGTFCVSGMI
MEALLRPRIMLSLTIILIPIFLFISGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAAtgkkkkktyvslavkptqlpdapneTNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQttfikipsnkvesftrveptdragnelkygpyeDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIgnistshlradswKISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVlpegakgpsavvpfpveqrLETKYSYLDVVGRTVVVLEKKNVVPVHNIPFQVTFSPVLPLHFLSIDFIIFVSVLLGTFCVSGMI
MEALLRPRIMlsltiilipiflfisGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAATGkkkkkTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVEPTDRAGNELKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTvvvlekknvvpvHNIPFQVTFSPVLPLHFLSIDFIIFVSVLLGTFCVSGMI
****LRPRIMLSLTIILIPIFLFISGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEAL***************************TNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESF**************YG*Y**RPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTVVVLEKKNVVPVHNIPFQVTFSPVLPLHFLSIDFIIFVSVLLGTFCVS***
*******RIMLSLTIILIPIFLFISGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEAL******************T**PDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIK*********************LKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDYQSKP******SFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTVVVLEKKNVVPVHNIPFQVTFSPVLPLHFLSIDFIIFVSVLLGTFCVSGMI
MEALLRPRIMLSLTIILIPIFLFISGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAATGKKKKKTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVEPTDRAGNELKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTVVVLEKKNVVPVHNIPFQVTFSPVLPLHFLSIDFIIFVSVLLGTFCVSGMI
*EALLRPRIMLSLTIILIPIFLFISGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAATGKKKKKTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVEPTDRAGNELKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTVVVLEKKNVVPVHNIPFQVTFSPVLPLHFLSIDFIIFVSVLLGTFCVS***
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiii
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEALLRPRIMLSLTIILIPIFLFISGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAATGKKKKKTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVEPTDRAGNELKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTVVVLEKKNVVPVHNIPFQVTFSPVLPLHFLSIDFIIFVSVLLGTFCVSGMI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query462 2.2.26 [Sep-21-2011]
Q9ZUA0464 Dolichyl-diphosphooligosa yes no 0.943 0.939 0.707 0.0
B9FDT1473 Dolichyl-diphosphooligosa yes no 0.909 0.887 0.677 1e-170
Q0DJC5 615 Dolichyl-diphosphooligosa yes no 0.857 0.643 0.566 1e-133
Q9SFX3 614 Dolichyl-diphosphooligosa no no 0.909 0.684 0.503 1e-121
Q9GMB0 608 Dolichyl-diphosphooligosa yes no 0.880 0.669 0.372 4e-73
Q5RFB6 607 Dolichyl-diphosphooligosa yes no 0.880 0.670 0.372 4e-72
P04843 607 Dolichyl-diphosphooligosa yes no 0.880 0.670 0.372 7e-72
Q91YQ5 608 Dolichyl-diphosphooligosa yes no 0.880 0.669 0.372 8e-72
Q4R4T0 607 Dolichyl-diphosphooligosa N/A no 0.880 0.670 0.370 9e-72
P07153 605 Dolichyl-diphosphooligosa yes no 0.880 0.672 0.368 1e-70
>sp|Q9ZUA0|OST1B_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B OS=Arabidopsis thaliana GN=OST1B PE=2 SV=1 Back     alignment and function desciption
 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/444 (70%), Positives = 372/444 (83%), Gaps = 8/444 (1%)

Query: 16  ILIPIFLFISGASSHQ-IRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPT 74
           + + + L IS  SS Q ++I NAERRIDLS+HIVK FLTLKVEN GK  A+E+LLAFPPT
Sbjct: 10  VFVAVLLSISAFSSAQDLQIVNAERRIDLSSHIVKAFLTLKVENIGKDPAAEMLLAFPPT 69

Query: 75  QVDHLAFLEALAATGKKKKKTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEI 134
           Q+ +LA ++ALA TGKKKKKTY+ L VKPT+ PDAPN+T YY +   +PL  GET +LE+
Sbjct: 70  QIKNLAMVQALATTGKKKKKTYLPLDVKPTEQPDAPNDTGYYRVTFISPLGPGETVSLEV 129

Query: 135 LYILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVEPT 194
           LYILTHSLEPFPVEI+QSESQLVYY DSA+ILSPYH+KQQTTFIK PS +VESFT +EP 
Sbjct: 130 LYILTHSLEPFPVEITQSESQLVYYHDSAVILSPYHVKQQTTFIKTPSTRVESFTSIEPA 189

Query: 195 DRAGNELKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLA 254
           +RAG E+KYGPYE+R  YSY+P+++HFENN+PF+VVEELVRE+EISHWG+LQITE Y+L 
Sbjct: 190 NRAGKEIKYGPYENRASYSYTPVIIHFENNSPFAVVEELVREIEISHWGSLQITENYRLT 249

Query: 255 HAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSW 314
           H GARHKG+FSRVDYQSK + SG SSF  LLA LPPRV+SVYYRDEIGNISTSHLR   +
Sbjct: 250 HGGARHKGVFSRVDYQSKRSVSGASSFNALLAVLPPRVNSVYYRDEIGNISTSHLRT-GF 308

Query: 315 KISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLT 374
           + SELE EPRYPLFGGW ATF+IGY +PLED+LFE+SDGRRYLNFTFGCPLVET+V+KLT
Sbjct: 309 RKSELEFEPRYPLFGGWSATFIIGYRVPLEDYLFEASDGRRYLNFTFGCPLVETIVNKLT 368

Query: 375 IKVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTVVVLEKKNVVPVHNIPFQV--TF 432
           IKVVLPEG+K PSAV+PF V Q L+ KYSYLD+VGRTVVVL+K NVVP HN+PFQV  TF
Sbjct: 369 IKVVLPEGSKDPSAVLPFTVNQELQVKYSYLDIVGRTVVVLQKDNVVPTHNVPFQVYYTF 428

Query: 433 SPVL----PLHFLSIDFIIFVSVL 452
            P+     P   +S  F++FV+ L
Sbjct: 429 KPIYMLAEPFMLVSAFFLVFVASL 452




Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 9EC: 9EC: .EC: 1EC: 8
>sp|B9FDT1|OST1B_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B OS=Oryza sativa subsp. japonica GN=OST1B PE=2 SV=1 Back     alignment and function description
>sp|Q0DJC5|OST1A_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A OS=Oryza sativa subsp. japonica GN=OST1A PE=2 SV=1 Back     alignment and function description
>sp|Q9SFX3|OST1A_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A OS=Arabidopsis thaliana GN=OST1A PE=2 SV=1 Back     alignment and function description
>sp|Q9GMB0|RPN1_PIG Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Sus scrofa GN=RPN1 PE=1 SV=1 Back     alignment and function description
>sp|Q5RFB6|RPN1_PONAB Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Pongo abelii GN=RPN1 PE=2 SV=1 Back     alignment and function description
>sp|P04843|RPN1_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Homo sapiens GN=RPN1 PE=1 SV=1 Back     alignment and function description
>sp|Q91YQ5|RPN1_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus GN=Rpn1 PE=2 SV=1 Back     alignment and function description
>sp|Q4R4T0|RPN1_MACFA Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Macaca fascicularis GN=RPN1 PE=2 SV=1 Back     alignment and function description
>sp|P07153|RPN1_RAT Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus GN=Rpn1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query462
224097868469 predicted protein [Populus trichocarpa] 0.941 0.927 0.781 0.0
118488519469 unknown [Populus trichocarpa] 0.945 0.931 0.762 0.0
224113051463 predicted protein [Populus trichocarpa] 0.945 0.943 0.762 0.0
118488320469 unknown [Populus trichocarpa] 0.954 0.940 0.754 0.0
255587124448 ribophorin, putative [Ricinus communis] 0.887 0.915 0.798 0.0
225449032466 PREDICTED: dolichyl-diphosphooligosaccha 0.971 0.963 0.729 0.0
356535631469 PREDICTED: dolichyl-diphosphooligosaccha 0.919 0.906 0.719 0.0
356576227463 PREDICTED: dolichyl-diphosphooligosaccha 0.922 0.920 0.711 0.0
357443215473 Dolichyl-diphosphooligosaccharide-protei 0.971 0.949 0.676 0.0
297817778464 ribophorin I family protein [Arabidopsis 0.943 0.939 0.704 0.0
>gi|224097868|ref|XP_002311086.1| predicted protein [Populus trichocarpa] gi|222850906|gb|EEE88453.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  701 bits (1808), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/443 (78%), Positives = 386/443 (87%), Gaps = 8/443 (1%)

Query: 17  LIPIFLFISGASS-HQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQ 75
           LI  FL IS ASS +QI+I NAERRIDLS+HIVKVFLTLKVEN G T ASEI+LAF P Q
Sbjct: 17  LILTFLTISAASSTNQIQILNAERRIDLSSHIVKVFLTLKVENVGTTPASEIVLAFAPAQ 76

Query: 76  VDHLAFLEALAATGKKKKKTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEIL 135
            DHLA ++A AA GKKKKK+YV L V PT+LPDAPN T Y++I L NPL++GETATLE+L
Sbjct: 77  ADHLALVKAQAAIGKKKKKSYVHLDVNPTELPDAPNGTKYFSISLLNPLSSGETATLEVL 136

Query: 136 YILTHSLEPFPVEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVEPTD 195
           YILTHSLEPFP EISQSESQLVY+RDSALILSPYH+KQQTTF+K PS KVESFTRVEPT 
Sbjct: 137 YILTHSLEPFPAEISQSESQLVYFRDSALILSPYHVKQQTTFLKTPSTKVESFTRVEPTK 196

Query: 196 RAGNELKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAH 255
            AG ELKYGPYED PPYS+SP++VH ENN+PF+VVEEL+REVEISHWGNLQITE YKL H
Sbjct: 197 LAGRELKYGPYEDHPPYSFSPVIVHLENNSPFAVVEELLREVEISHWGNLQITEHYKLVH 256

Query: 256 AGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWK 315
           AGARHKG+FSRV+YQS+P+FSG SSFKHLLA LPPRVHSVYYRD+IGNIS+SHLR+D+ K
Sbjct: 257 AGARHKGVFSRVEYQSRPSFSGTSSFKHLLASLPPRVHSVYYRDDIGNISSSHLRSDNRK 316

Query: 316 ISELEIEPRYPLFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTI 375
            SELEIEPRYPLFGGW+ATFVIGYGLPLEDFLFES DG+RYLNF+FGCPL ETVVDKLTI
Sbjct: 317 -SELEIEPRYPLFGGWKATFVIGYGLPLEDFLFESPDGKRYLNFSFGCPLAETVVDKLTI 375

Query: 376 KVVLPEGAKGPSAVVPFPVEQRLETKYSYLDVVGRTVVVLEKKNVVPVHNIPFQV--TFS 433
           KVVLPEG+K PSAVVPFPVEQRLETKYSYLDVVGRTV+VLE KNVVP H  PFQV  TF 
Sbjct: 376 KVVLPEGSKDPSAVVPFPVEQRLETKYSYLDVVGRTVLVLENKNVVPEHITPFQVYYTFK 435

Query: 434 PVL----PLHFLSIDFIIFVSVL 452
           P+     PL   S+ F+ F++ L
Sbjct: 436 PIFMLAEPLMLASVFFLFFMACL 458




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488519|gb|ABK96072.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224113051|ref|XP_002316373.1| predicted protein [Populus trichocarpa] gi|222865413|gb|EEF02544.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118488320|gb|ABK95979.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255587124|ref|XP_002534147.1| ribophorin, putative [Ricinus communis] gi|223525793|gb|EEF28240.1| ribophorin, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225449032|ref|XP_002273327.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 [Vitis vinifera] gi|296086009|emb|CBI31450.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356535631|ref|XP_003536348.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356576227|ref|XP_003556235.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like [Glycine max] Back     alignment and taxonomy information
>gi|357443215|ref|XP_003591885.1| Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit [Medicago truncatula] gi|355480933|gb|AES62136.1| Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit [Medicago truncatula] Back     alignment and taxonomy information
>gi|297817778|ref|XP_002876772.1| ribophorin I family protein [Arabidopsis lyrata subsp. lyrata] gi|297322610|gb|EFH53031.1| ribophorin I family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query462
TAIR|locus:2065378464 AT2G01720 "AT2G01720" [Arabido 0.919 0.915 0.682 4.6e-160
TAIR|locus:2014579 614 AT1G76400 "AT1G76400" [Arabido 0.909 0.684 0.473 4.1e-104
UNIPROTKB|E1C0F1 601 RPN1 "Dolichyl-diphosphooligos 0.902 0.693 0.375 2.5e-72
MGI|MGI:98084 608 Rpn1 "ribophorin I" [Mus muscu 0.880 0.669 0.363 3.1e-67
UNIPROTKB|F1SPG2 608 RPN1 "Dolichyl-diphosphooligos 0.880 0.669 0.358 4e-67
UNIPROTKB|Q9GMB0 608 RPN1 "Dolichyl-diphosphooligos 0.880 0.669 0.358 4e-67
ZFIN|ZDB-GENE-030131-4286 598 rpn1 "ribophorin I" [Danio rer 0.889 0.687 0.331 5.1e-67
UNIPROTKB|P04843 607 RPN1 "Dolichyl-diphosphooligos 0.885 0.673 0.363 1.3e-66
UNIPROTKB|E2RQ08 607 RPN1 "Uncharacterized protein" 0.880 0.670 0.356 1.7e-66
UNIPROTKB|A3KN04 609 RPN1 "Uncharacterized protein" 0.880 0.668 0.361 1.2e-65
TAIR|locus:2065378 AT2G01720 "AT2G01720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1559 (553.9 bits), Expect = 4.6e-160, P = 4.6e-160
 Identities = 295/432 (68%), Positives = 351/432 (81%)

Query:    27 ASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALA 86
             +S+  ++I NAERRIDLS+HIVK FLTLKVEN GK  A+E+LLAFPPTQ+ +LA ++ALA
Sbjct:    22 SSAQDLQIVNAERRIDLSSHIVKAFLTLKVENIGKDPAAEMLLAFPPTQIKNLAMVQALA 81

Query:    87 ATGXXXXXTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFP 146
              TG     TY+ L VKPT+ PDAPN+T YY +   +PL  GET +LE+LYILTHSLEPFP
Sbjct:    82 TTGKKKKKTYLPLDVKPTEQPDAPNDTGYYRVTFISPLGPGETVSLEVLYILTHSLEPFP 141

Query:   147 VEISQSESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVEPTDRAGNELKYGPY 206
             VEI+QSESQLVYY DSA+ILSPYH+KQQTTFIK PS +VESFT +EP +RAG E+KYGPY
Sbjct:   142 VEITQSESQLVYYHDSAVILSPYHVKQQTTFIKTPSTRVESFTSIEPANRAGKEIKYGPY 201

Query:   207 EDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSR 266
             E+R  YSY+P+++HFENN+PF+VVEELVRE+EISHWG+LQITE Y+L H GARHKG+FSR
Sbjct:   202 ENRASYSYTPVIIHFENNSPFAVVEELVREIEISHWGSLQITENYRLTHGGARHKGVFSR 261

Query:   267 VDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYP 326
             VDYQSK + SG SSF  LLA LPPRV+SVYYRDEIGNISTSHLR   ++ SELE EPRYP
Sbjct:   262 VDYQSKRSVSGASSFNALLAVLPPRVNSVYYRDEIGNISTSHLRT-GFRKSELEFEPRYP 320

Query:   327 LFGGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGP 386
             LFGGW ATF+IGY +PLED+LFE+SDGRRYLNFTFGCPLVET+V+KLTIKVVLPEG+K P
Sbjct:   321 LFGGWSATFIIGYRVPLEDYLFEASDGRRYLNFTFGCPLVETIVNKLTIKVVLPEGSKDP 380

Query:   387 SAVVPFPVEQRLETKYSYLDVVGRTXXXXXXXXXXXXHNIPFQV--TFSPVL----PLHF 440
             SAV+PF V Q L+ KYSYLD+VGRT            HN+PFQV  TF P+     P   
Sbjct:   381 SAVLPFTVNQELQVKYSYLDIVGRTVVVLQKDNVVPTHNVPFQVYYTFKPIYMLAEPFML 440

Query:   441 LSIDFIIFVSVL 452
             +S  F++FV+ L
Sbjct:   441 VSAFFLVFVASL 452




GO:0004576 "oligosaccharyl transferase activity" evidence=ISS
GO:0004579 "dolichyl-diphosphooligosaccharide-protein glycotransferase activity" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA
GO:0006486 "protein glycosylation" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2014579 AT1G76400 "AT1G76400" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1C0F1 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:98084 Rpn1 "ribophorin I" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1SPG2 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q9GMB0 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-4286 rpn1 "ribophorin I" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P04843 RPN1 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RQ08 RPN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|A3KN04 RPN1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9ZUA0OST1B_ARATH2, ., 4, ., 9, 9, ., 1, 80.70720.94370.9396yesno
Q54C27OST1_DICDI2, ., 4, ., 1, ., 1, 1, 90.35090.83760.8413yesno
B9FDT1OST1B_ORYSJ2, ., 4, ., 9, 9, ., 1, 80.67750.90900.8879yesno
Q0DJC5OST1A_ORYSJ2, ., 4, ., 9, 9, ., 1, 80.56640.85710.6439yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.1190.824

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query462
pfam04597429 pfam04597, Ribophorin_I, Ribophorin I 1e-159
>gnl|CDD|218165 pfam04597, Ribophorin_I, Ribophorin I Back     alignment and domain information
 Score =  457 bits (1177), Expect = e-159
 Identities = 183/433 (42%), Positives = 244/433 (56%), Gaps = 19/433 (4%)

Query: 32  IRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAATGKK 91
               N ER IDL+   VK  + + ++N G    SE   AFPP + D+LA L A      K
Sbjct: 2   WENVNVERTIDLTKSYVKETIKITIKNIGDEPQSEYYFAFPPDEADNLAGLSA-KDKDAK 60

Query: 92  KKKTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQ 151
           +K  +  + V+         +T Y+ I L  PL  GE  TL++ Y+LT+ L+P P EI+Q
Sbjct: 61  EKGKFEPIEVENGS------DTGYFKITLPKPLAPGEQVTLKVSYVLTNPLKPLPAEITQ 114

Query: 152 SESQLVYYRDSALILSPYHIKQQTTFIKIPSNKVESFTRVE--PTDRAGNELKYGPYEDR 209
           SE QL+ Y  +A   SPY  K+Q T IK PS  + S+T+    P  R GN L YGPYE+ 
Sbjct: 115 SEKQLLLYETNAYFYSPYPTKKQKTKIKGPSGNILSYTKTPNLPPTRQGNTLTYGPYENV 174

Query: 210 PPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNLQITEQYKLAHAGARHKGIFSRVDY 269
           P +S  P+ VH+ENN P   V  L R++E+SHWGN+ + E Y+L + GA+ KG FSRVDY
Sbjct: 175 PAFSLEPITVHYENNKPLITVTNLERDIEVSHWGNIAVEEYYELTNNGAKLKGGFSRVDY 234

Query: 270 QSKPT-FSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRYPLF 328
           Q         S+ K L   LP     VYY DEIGN+STS +R D     ELE++PR+PLF
Sbjct: 235 QKGSYSTRNSSALKSLKTPLPAGATDVYYTDEIGNVSTSRVREDKDSA-ELELKPRFPLF 293

Query: 329 GGWRATFVIGYGLPLEDFLFESSDGRRYLNFTFGCPLVETVVDKLTIKVVLPEGAKGPSA 388
           GGW+  F IG+ LPL DFL +  D    L   F     + V D +T+KV+LPEGA+    
Sbjct: 294 GGWKYNFTIGWNLPLSDFLRKDGDNTYVLKVPFLNGPKDVVYDNVTLKVILPEGAEDIKV 353

Query: 389 VVPFPVEQR-LETKYSYLDVVGRTVVVLEKKNVVP-VHNIPFQVT--FSPVL----PLHF 440
             PFP++   LE + SYLD  GR VV LEKKN+V    +    VT  +S       PL  
Sbjct: 354 ETPFPIDSVELELEKSYLDTKGRPVVTLEKKNLVDEHRDQDVLVTYKYSKSAILRKPLLI 413

Query: 441 LSIDFIIFVSVLL 453
               FI+F++V+L
Sbjct: 414 AGGFFILFLAVIL 426


Ribophorin I is an essential subunit of oligosaccharyltransferase (OST), which is also known as Dolichyl-diphosphooligosaccharide--protein glycosyltransferase, (EC:2.4.1.119). OST catalyzes the transfer of an oligosaccharide from dolichol pyrophosphate to selected asparagine residues of nascent polypeptides as they are translocated into the lumen of the rough endoplasmic reticulum. Ribophorin I and OST48 are though to be responsible for OST catalytic activity. Both yeast and mammalian proteins are glycosylated but the sites are not conserved. Glycosylation may contribute towards general solubility but is unlikely to be involved in a specific biochemical function Most family members are predicted to have a transmembrane helix at the C terminus of this region. Length = 429

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 462
KOG2291 602 consensus Oligosaccharyltransferase, alpha subunit 100.0
PF04597432 Ribophorin_I: Ribophorin I; InterPro: IPR007676 Ri 100.0
smart00609130 VIT Vault protein Inter-alpha-Trypsin domain. 91.81
PF08487118 VIT: Vault protein inter-alpha-trypsin domain; Int 91.42
PF09972 511 DUF2207: Predicted membrane protein (DUF2207); Int 90.38
TIGR03788 596 marine_srt_targ marine proteobacterial sortase tar 80.79
>KOG2291 consensus Oligosaccharyltransferase, alpha subunit (ribophorin I) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
Probab=100.00  E-value=6.2e-131  Score=1013.34  Aligned_cols=445  Identities=51%  Similarity=0.815  Sum_probs=413.2

Q ss_pred             hhhHHHHHHHHHHHHHHhhccCCCCCeEEeeEEEEEEcCCCeEEEEEEEEEEeCCCCCccEEEEEcCCCcccceeEEEEE
Q 012485            6 RPRIMLSLTIILIPIFLFISGASSHQIRINNAERRIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEAL   85 (462)
Q Consensus         6 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~n~~v~R~IdL~~~~vk~~~~i~ikN~g~~~~~~y~~~l~~~~~~~ls~~~a~   85 (462)
                      +++||+..+++|..++..+++.+++.|+|.|++|||||++|++|++++++++|+|++|+++|.+++++....+||+++|.
T Consensus         5 ~~~~~~~l~l~l~aia~~~a~~a~~~w~n~nv~RTIDlsS~ivK~tt~l~i~N~g~ePatey~~a~~~~~~~~la~ls~~   84 (602)
T KOG2291|consen    5 SASWALVLVLLLFAIASGAASSAEQDWVNVNVERTIDLSSQIVKVTTELSIENIGSEPATEYLLAFEKELGASLAFLSVA   84 (602)
T ss_pred             hhHHHHHHHHHHHHHhhccccCCccccccccceEEEehhhhhhhheeEEEEEecCCCchheEEEeccCccccceeEEEEe
Confidence            66777666666665665557778899999999999999999999999999999999999999999999999999999998


Q ss_pred             EcCCccccceeeeeeeeeecCCCCCCCceEEEEEeCCCCCCCCeEEEEEEEEEcccccccCcccCcCCceeEEEEeCcee
Q 012485           86 AATGKKKKKTYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSESQLVYYRDSALI  165 (462)
Q Consensus        86 ~~~~~~k~~~~~~l~v~~~~~~~~~~~~~~~~I~Lp~pl~p~~~~~l~v~~~~~~~~~P~P~~I~q~e~Q~l~~~~n~~~  165 (462)
                      ..+++++  +...+++.+.++.+ +++ .+|.|+||.|+.||++++|.|++++++.++|+|++|+|+|+|+|+|.+|+|+
T Consensus        85 ~~~g~~~--~~l~~s~~~~~~~~-~~~-~~y~v~lp~pl~pge~vTl~V~~~~t~vl~P~Pe~I~QsE~Q~vv~~tn~~~  160 (602)
T KOG2291|consen   85 FTEGKKK--TLLKLSVNPPKKDG-ASE-RVYTVTLPNPLSPGEKVTLIVEAVLTHVLRPLPEEITQSEEQFVVYETNAYL  160 (602)
T ss_pred             eccCccc--cccccccCCcccCC-Ccc-ceEEEeCCCCCCCCceEEEEEEeecccCcccChhhhCcCceeeEEEeccccc
Confidence            8776643  22445666655222 223 7999999999999999999999999999999999999999999999999999


Q ss_pred             cCcceeceEEEEEEeCCCccceeeccCCccccCCeEEeccCCCCCCCCcCCeEEEEEcccceeEEeeeEEEEEEecccce
Q 012485          166 LSPYHIKQQTTFIKIPSNKVESFTRVEPTDRAGNELKYGPYEDRPPYSYSPLLVHFENNNPFSVVEELVREVEISHWGNL  245 (462)
Q Consensus       166 ~SpY~t~~q~t~i~~~s~~i~s~t~~~~~~~~g~~i~yGP~~~v~p~s~~~~~Vhye~n~P~~~v~~L~R~IeVSHWGni  245 (462)
                      +|||.|++|+|.+++||+++++||+.++.+++|+.++||||+|+++|+++|+.||||||.||+++++|+|+|||||||||
T Consensus       161 ~SpY~Tk~Q~t~ikl~Ss~ies~T~~~~~k~~gn~l~yGPyeni~afs~~pl~VhYEnnaPf~~v~~L~R~IevSHWgnI  240 (602)
T KOG2291|consen  161 LSPYDTKSQSTTIKLPSSKIESYTTVEPSKRSGNELKYGPYENIPAFSQEPLVVHYENNAPFVTVENLEREIEVSHWGNI  240 (602)
T ss_pred             cCcccccceeEEEEcccccceeccccCcccccCceeeecCccccccccCCceEEEEecCCCcceeeeEEEEEEeecceee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEEEEEcCCCccCcccchhcccCCCCCCccceeeeeeecCCcccCeEEEeccceeeeeeeeecCCceEEEEEecCC
Q 012485          246 QITEQYKLAHAGARHKGIFSRVDYQSKPTFSGVSSFKHLLARLPPRVHSVYYRDEIGNISTSHLRADSWKISELEIEPRY  325 (462)
Q Consensus       246 ~veE~y~l~N~GA~Lkg~FSR~d~~~~~~~~~~~~~~~l~~~LP~~a~d~YY~D~IGNISTS~~r~~~~~~~~l~l~PRf  325 (462)
                      +|||+|+|+|+||+|||+|||+|||++...++.++++++.+.||++|+|+||||+||||||||+|.+.++ ++|+|+|||
T Consensus       241 qVeE~~~lth~gAkLkg~FSR~d~q~~~~~~g~sai~~l~~~LP~~A~dvYYrDeiGNISTShmr~~~~~-~eleirPRf  319 (602)
T KOG2291|consen  241 QVEENYELTHKGAKLKGPFSRLDYQKQRRTRGASAINSLKTVLPARAKDVYYRDEIGNISTSHMRIDPDK-TELEIRPRF  319 (602)
T ss_pred             EEEEEEEEEecceeccCCcchHhhhhcCCcCcchHHHHHHhhCCCccCceeeecccCcEehhhhcccCcc-ceEEeccCC
Confidence            9999999999999999999999999886658899999999999999999999999999999999999999 999999999


Q ss_pred             cccCCceeeEEEeecCCcccceeeccCCceE-EEEEecCCC-cceEEEEEEEEEEcCCCCcCCeeeCCccee-eeceeEE
Q 012485          326 PLFGGWRATFVIGYGLPLEDFLFESSDGRRY-LNFTFGCPL-VETVVDKLTIKVVLPEGAKGPSAVVPFPVE-QRLETKY  402 (462)
Q Consensus       326 PLfGGWk~~FtiGyn~pl~~~L~~~~~~~~y-L~vp~~~~~-~d~~vd~~~l~IiLPEGA~~i~v~~P~~v~-~~~~~~~  402 (462)
                      ||||||||+|++|||+|+++||+  .+|++| |+++|..++ +|++||+++++|+|||||+||++.+||+++ .+.++++
T Consensus       320 PlFGGWkt~ftiGy~lP~~eyl~--~~g~ry~L~~~~~~~~~d~~V~dkl~ikvvLPEGak~i~i~tP~~is~~p~e~~~  397 (602)
T KOG2291|consen  320 PLFGGWKTNFTIGYNLPLEEYLF--SKGRRYALKIILIDHIFDDTVYDKLTIKVVLPEGAKDIEIDTPYEISRSPIELKY  397 (602)
T ss_pred             ccccCceeeEEEecCCcHHHHhh--ccCceeEEccccccCCCccceeeeEEEEEEccCCCcccccccceeeccCchhhhh
Confidence            99999999999999999999998  478888 999998865 677999999999999999999999999986 6799999


Q ss_pred             EecCCCCCeEEEEEeecCCcCCcceEEE--EeCCch----hHHHHHHHHHHHHHHHHHhhh
Q 012485          403 SYLDVVGRTVVVLEKKNVVPVHNIPFQV--TFSPVL----PLHFLSIDFIIFVSVLLGTFC  457 (462)
Q Consensus       403 tyLDt~GRpvv~l~~~Nlv~~h~~~~~V--~y~~~~----Pl~i~~~~f~~fl~~~~~~~~  457 (462)
                      |||||.||||++++++|+|+.|+++|+|  +|++..    ||+|+++||++|+++++|+|.
T Consensus       398 syLDt~GR~Vvv~ek~Nvv~~h~~~i~v~Y~f~~~sml~ePL~i~a~ffilf~~~i~y~~~  458 (602)
T KOG2291|consen  398 SYLDTNGRPVVVLEKNNVVPDHNQDIVVHYTFSKSSMLQEPLLIIAAFFILFFAVIVYVRL  458 (602)
T ss_pred             hhhhccCcEEEEEEccccCCCCCccEEEEEEechhHhhhccHHHHHHHHHHHHHHheeeec
Confidence            9999999999999999999999999999  777655    999999999999999999984



>PF04597 Ribophorin_I: Ribophorin I; InterPro: IPR007676 Ribophorin I is an essential subunit of oligosaccharyltransferase (OST), which is also known as dolichyl-diphosphooligosaccharide--protein glycosyltransferase, (2 Back     alignment and domain information
>smart00609 VIT Vault protein Inter-alpha-Trypsin domain Back     alignment and domain information
>PF08487 VIT: Vault protein inter-alpha-trypsin domain; InterPro: IPR013694 Inter-alpha-trypsin inhibitors (ITIs) consist of one light chain and a variable set of heavy chains Back     alignment and domain information
>PF09972 DUF2207: Predicted membrane protein (DUF2207); InterPro: IPR018702 This domain has no known function Back     alignment and domain information
>TIGR03788 marine_srt_targ marine proteobacterial sortase target protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query462
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 48.3 bits (114), Expect = 4e-06
 Identities = 51/320 (15%), Positives = 98/320 (30%), Gaps = 76/320 (23%)

Query: 40  RIDLSTHIVKVFLTLKVENTGKTSASEILLAFPPTQVDHLAFLEALAATGKK-----KKK 94
           +I L+T   +V   L    T   S     +   P +V  L  L+ L    +         
Sbjct: 267 KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL-LLKYLDCRPQDLPREVLTT 325

Query: 95  TYVSLAVKPTQLPDAPNETNYYTIVLANPLNTGETATLEILYILTHSLEPFPVEISQSES 154
               L++    + D     + +  V  + L T   ++L +L          P E  +   
Sbjct: 326 NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE---------PAEYRK--- 373

Query: 155 QLVYYRDSALILSPYHIKQQTTFIKIPSNKVESF----TRVEPTDRAGNEL-KYGPYE-D 208
               +   ++   P           IP+  +        + +      N+L KY   E  
Sbjct: 374 ---MFDRLSVF--PPS-------AHIPTILLSLIWFDVIKSDVMVVV-NKLHKYSLVEKQ 420

Query: 209 RPPYSYSPLLVHFE----NNNPFSVVEELVREVEIS---HWGNL--QITEQYKLAHAGAR 259
               + S   ++ E      N +++   +V    I       +L     +QY  +H G  
Sbjct: 421 PKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG-H 479

Query: 260 H-KGI--------FSRV--DY---QSK-----PTFSGVSSFKHLLARLPPRVHSVYYRDE 300
           H K I        F  V  D+   + K       ++   S  + L +L       +Y+  
Sbjct: 480 HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLK------FYKPY 533

Query: 301 IGNISTSHLRADSWKISELE 320
           I      +       ++ + 
Sbjct: 534 I----CDNDPKYERLVNAIL 549


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00