Citrus Sinensis ID: 012492
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 462 | 2.2.26 [Sep-21-2011] | |||||||
| O82730 | 468 | Monogalactosyldiacylglyce | yes | no | 0.974 | 0.961 | 0.778 | 0.0 | |
| Q9SI93 | 465 | Monogalactosyldiacylglyce | no | no | 0.982 | 0.976 | 0.724 | 0.0 | |
| Q0DWQ1 | 508 | Probable monogalactosyldi | yes | no | 0.887 | 0.807 | 0.781 | 0.0 | |
| A2YTP9 | 469 | Probable monogalactosyldi | N/A | no | 0.865 | 0.852 | 0.75 | 1e-177 | |
| Q6UTZ2 | 469 | Probable monogalactosyldi | yes | no | 0.867 | 0.855 | 0.748 | 1e-177 | |
| O81770 | 533 | Monogalactosyldiacylglyce | no | no | 0.870 | 0.754 | 0.619 | 1e-144 | |
| Q9FZL4 | 530 | Probable monogalactosyldi | no | no | 0.878 | 0.766 | 0.608 | 1e-143 | |
| P93115 | 525 | Monogalactosyldiacylglyce | N/A | no | 0.874 | 0.769 | 0.606 | 1e-141 | |
| Q9SM44 | 522 | Monogalactosyldiacylglyce | N/A | no | 0.876 | 0.775 | 0.607 | 1e-141 | |
| Q9FZL3 | 535 | Probable monogalactosyldi | N/A | no | 0.841 | 0.727 | 0.622 | 1e-141 |
| >sp|O82730|MGDG2_ARATH Monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana GN=MGD2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/464 (77%), Positives = 402/464 (86%), Gaps = 14/464 (3%)
Query: 12 VSLTEKVLQRVYGNHSTSSSSNLG-------------CSFDSDDDCEEDDESTVELMQIG 58
++L EKVL+RVYG ++ S G S DD +ED ES++EL+QIG
Sbjct: 6 MALAEKVLERVYGTSKSAVSVTSGDGEKTHRHTHHHIHRIKSYDDIDED-ESSLELIQIG 64
Query: 59 AERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSY 118
AERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGD+YR+ VKDV KEY GWPLNDMERSY
Sbjct: 65 AERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDKYRVIVKDVWKEYTGWPLNDMERSY 124
Query: 119 KFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHI 178
KFMVKHVQLWKVAFHSTSPKWIHSCYLAA+AAYYAKEVEAGLMEYKP+IIISVHPLMQHI
Sbjct: 125 KFMVKHVQLWKVAFHSTSPKWIHSCYLAAIAAYYAKEVEAGLMEYKPEIIISVHPLMQHI 184
Query: 179 PLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIR 238
PLWVLKWQ LQK+V+FVTVITDLNTCHPTWFHP VNRCYCPS+EVAKRA + GL+ SQ+R
Sbjct: 185 PLWVLKWQELQKRVLFVTVITDLNTCHPTWFHPGVNRCYCPSQEVAKRALFDGLDESQVR 244
Query: 239 VFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKE 298
VFGLP+RPSF RAV+ KD+LR EL+MD L AVLLMGGGEGMGPVKETA AL E L DKE
Sbjct: 245 VFGLPVRPSFARAVLVKDDLRKELEMDQDLRAVLLMGGGEGMGPVKETAKALEEFLYDKE 304
Query: 299 TGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIA 358
+PIGQ+++ICGRN+ LAS L++ +WKIPVKVRGFETQMEKWMGACDCIITKAGPGTIA
Sbjct: 305 NRKPIGQMVVICGRNKKLASALEAIDWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIA 364
Query: 359 EALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMS 418
E+LIR LPIILNDYIPGQEKGNVPYVV+NGAGVFTRSPKETARIV EWFSTKTDEL++ S
Sbjct: 365 ESLIRSLPIILNDYIPGQEKGNVPYVVENGAGVFTRSPKETARIVGEWFSTKTDELEQTS 424
Query: 419 ENALKLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTASFTSII 462
+NA KLAQPEAV DIVKDI +L+ QRGPLA V Y LT+SF S++
Sbjct: 425 DNARKLAQPEAVFDIVKDIDELSEQRGPLASVSYNLTSSFASLV 468
|
Involved in the synthesis of the major structural component of photosynthetic membranes and in the chloroplast envelope biogenesis. Can use both prokaryotic (18:1/16:0) or eukaryotic (18:2/18:2) 1,2-diacylglycerol species, but operates with some preference for the eukaryotic one. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 4EC: 6 |
| >sp|Q9SI93|MGDG3_ARATH Monogalactosyldiacylglycerol synthase 3, chloroplastic OS=Arabidopsis thaliana GN=MGD3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/468 (72%), Positives = 383/468 (81%), Gaps = 14/468 (2%)
Query: 2 VMTVAYPK-KAVSLTEKVLQRVYGNHSTSSSSNLGCSFDSDDDCE----------EDDES 50
+M V P+ ++ S+TEKV +RVY N + S+ + D E ED E
Sbjct: 1 MMKVVSPRTRSDSITEKVFRRVYSNFNISTVEDEYIHRQRSSDYEKESRLRKRGLEDKEE 60
Query: 51 TVELMQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWP 110
+E+ Q+GAER K VLILMSDTGGGHRASAEAIRDAFKIEFGD+YRI +KDV KEY GWP
Sbjct: 61 VMEMEQMGAERIKTVLILMSDTGGGHRASAEAIRDAFKIEFGDDYRIIIKDVWKEYTGWP 120
Query: 111 LNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIIS 170
LNDMER YKFMVKHV LW VAFH TSPKWIH YL+A+AAYYAKE+EAGLMEYKPDIIIS
Sbjct: 121 LNDMERQYKFMVKHVGLWSVAFHGTSPKWIHKSYLSALAAYYAKEIEAGLMEYKPDIIIS 180
Query: 171 VHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYF 230
VHPLMQHIPLWV+KWQGL KKVIFVTVITDLNTCH TWFH V+RCYCPSKEVAKRA
Sbjct: 181 VHPLMQHIPLWVMKWQGLHKKVIFVTVITDLNTCHRTWFHHGVSRCYCPSKEVAKRALVD 240
Query: 231 GLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMAL 290
GL+ SQIRVFGLP+RPSF R +++K+ LR EL++D LPAVLLMGGGEGMGPV++TA+AL
Sbjct: 241 GLDDSQIRVFGLPVRPSFPRTILNKNELRKELEIDLNLPAVLLMGGGEGMGPVQKTALAL 300
Query: 291 GESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIIT 350
G+SL + + PIGQLI+ICGRN+ LASTL S EWKIPVKVRGFETQMEKWMGACDCIIT
Sbjct: 301 GDSLYNSKESNPIGQLIVICGRNKVLASTLASHEWKIPVKVRGFETQMEKWMGACDCIIT 360
Query: 351 KAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTK 410
KAGPGTIAEALI GLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETA+IV +WFS
Sbjct: 361 KAGPGTIAEALICGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETAKIVADWFSNN 420
Query: 411 TDELKRMSENALKLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTASF 458
+ELK+MSENALKL+QPEAV DIVKDIH L+ Q+ R+P S+
Sbjct: 421 KEELKKMSENALKLSQPEAVFDIVKDIHHLSQQQ---QRIPLFNEFSY 465
|
Involved in the synthesis of the major structural component of photosynthetic membranes and in the chloroplast envelope biogenesis. Can use both prokaryotic (18:1/16:0) or eukaryotic (18:2/18:2) 1,2-diacylglycerol species, but operates with some preference for the eukaryotic one. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q0DWQ1|MGDG3_ORYSJ Probable monogalactosyldiacylglycerol synthase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=MGD3 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/411 (78%), Positives = 372/411 (90%), Gaps = 1/411 (0%)
Query: 36 CSFDSDDD-CEEDDESTVELMQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDE 94
C D DD+ E++E TVEL+Q+GA R KNVLILMSDTGGGHRASA+AI+D F+IEFGD+
Sbjct: 72 CGPDEDDEPFWEEEEGTVELVQLGANRAKNVLILMSDTGGGHRASAQAIKDPFRIEFGDD 131
Query: 95 YRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAK 154
YR+FVKD+CK++AGWPLN+ME SYKFMVKHVQLWKVAFH+TSP+W+H YLAA+A++YAK
Sbjct: 132 YRVFVKDLCKDHAGWPLNNMESSYKFMVKHVQLWKVAFHTTSPRWVHCFYLAALASFYAK 191
Query: 155 EVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVN 214
+VEAGL +YKPDIIISVHPLMQHIPLWVLKWQGLQ +V+FVTVITDLNTCHPTWFH VN
Sbjct: 192 KVEAGLKKYKPDIIISVHPLMQHIPLWVLKWQGLQNRVVFVTVITDLNTCHPTWFHADVN 251
Query: 215 RCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLM 274
RCYCPS+EVAKRA+ L+ SQIRVFGLPIRPSF RAV+ KD+LR EL++DP LPAVLLM
Sbjct: 252 RCYCPSEEVAKRAALDDLQPSQIRVFGLPIRPSFCRAVLVKDDLRKELELDPELPAVLLM 311
Query: 275 GGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGF 334
GGGEGMGPVK+TA ALGESL DKE G+PIGQLI+ICGRN+TL+S+LQ+ EWKIP+KVRGF
Sbjct: 312 GGGEGMGPVKKTAKALGESLFDKELGKPIGQLIVICGRNKTLSSSLQALEWKIPIKVRGF 371
Query: 335 ETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR 394
ETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILND+IPGQE GNVPYVVDNGAGVF++
Sbjct: 372 ETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPGQEVGNVPYVVDNGAGVFSK 431
Query: 395 SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQRG 445
S +ETA++V WF +DELKRMSE ALKLAQPEAV DIV+DIH+L+ ++G
Sbjct: 432 SSRETAKLVARWFGPDSDELKRMSEKALKLAQPEAVFDIVRDIHELSREQG 482
|
Involved in the synthesis of the major structural component of photosynthetic membranes. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|A2YTP9|MGDG2_ORYSI Probable monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Oryza sativa subsp. indica GN=MGD2 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 623 bits (1606), Expect = e-177, Method: Compositional matrix adjust.
Identities = 300/400 (75%), Positives = 338/400 (84%)
Query: 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMV 122
KNVLILMSDTGGGHRASAEA+RDAF++EFGD Y++FV+D+ KEY GWPLNDMERSYKFM+
Sbjct: 70 KNVLILMSDTGGGHRASAEALRDAFRLEFGDAYQVFVRDLGKEYGGWPLNDMERSYKFMI 129
Query: 123 KHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWV 182
+HV+LWKVAFH TSP+W+H YLAA+A +YA EV AG+M Y PDIIISVHPLMQHIPLWV
Sbjct: 130 RHVRLWKVAFHGTSPRWVHGMYLAALAYFYANEVVAGIMRYNPDIIISVHPLMQHIPLWV 189
Query: 183 LKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGL 242
LKWQ L KV FVTVITDLNTCHPTWFH V RCYCPS EVAKRA GLE SQIRV+GL
Sbjct: 190 LKWQSLHPKVPFVTVITDLNTCHPTWFHHGVTRCYCPSAEVAKRALLRGLEPSQIRVYGL 249
Query: 243 PIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRP 302
PIRPSF RAV+ KD LR EL MDP LPAVLLMGGGEGMGPV+ETA AL + L D+ RP
Sbjct: 250 PIRPSFCRAVLDKDELRKELDMDPDLPAVLLMGGGEGMGPVEETATALSDELYDRRRRRP 309
Query: 303 IGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALI 362
+GQ+++ICGRN+ L STLQS W +PVK+RGFE QMEKWMGACDCIITKAGPGTIAEALI
Sbjct: 310 VGQIVVICGRNQVLRSTLQSSRWNVPVKIRGFEKQMEKWMGACDCIITKAGPGTIAEALI 369
Query: 363 RGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENAL 422
RGLPIILND+IPGQE GNVPYVVDNGAGVF++ P+E AR V WF+T T+EL+R S NAL
Sbjct: 370 RGLPIILNDFIPGQEVGNVPYVVDNGAGVFSKDPREAARQVARWFTTHTNELRRYSLNAL 429
Query: 423 KLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTASFTSII 462
KLAQPEAV DIVKDIH L Q + R+PY LT+SF+ I
Sbjct: 430 KLAQPEAVFDIVKDIHKLQQQPATVTRIPYSLTSSFSYSI 469
|
Involved in the synthesis of the major structural component of photosynthetic membranes. Oryza sativa subsp. indica (taxid: 39946) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q6UTZ2|MGDG2_ORYSJ Probable monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=MGD2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 622 bits (1604), Expect = e-177, Method: Compositional matrix adjust.
Identities = 300/401 (74%), Positives = 338/401 (84%)
Query: 62 TKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFM 121
KNVLILMSDTGGGHRASAEA+RDAF++EFGD Y++FV+D+ KEY GWPLNDMERSYKFM
Sbjct: 69 AKNVLILMSDTGGGHRASAEALRDAFRLEFGDAYQVFVRDLGKEYGGWPLNDMERSYKFM 128
Query: 122 VKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLW 181
++HV+LWKVAFH TSP+W+H YLAA+A +YA EV AG+M Y PDIIISVHPLMQHIPLW
Sbjct: 129 IRHVRLWKVAFHGTSPRWVHGMYLAALAYFYANEVVAGIMRYNPDIIISVHPLMQHIPLW 188
Query: 182 VLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFG 241
VLKWQ L KV FVTVITDLNTCHPTWFH V RCYCPS EVAKRA GLE SQIRV+G
Sbjct: 189 VLKWQSLHPKVPFVTVITDLNTCHPTWFHHGVTRCYCPSAEVAKRALLRGLEPSQIRVYG 248
Query: 242 LPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGR 301
LPIRPSF RAV+ KD LR EL MDP LPAVLLMGGGEGMGPV+ETA AL + L D+ R
Sbjct: 249 LPIRPSFCRAVLDKDELRKELDMDPDLPAVLLMGGGEGMGPVEETARALSDELYDRRRRR 308
Query: 302 PIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEAL 361
P+GQ+++ICGRN+ L STLQS W +PVK+RGFE QMEKWMGACDCIITKAGPGTIAEAL
Sbjct: 309 PVGQIVVICGRNQVLRSTLQSSRWNVPVKIRGFEKQMEKWMGACDCIITKAGPGTIAEAL 368
Query: 362 IRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENA 421
IRGLPIILND+IPGQE GNVPYVVDNGAGVF++ P+E AR V WF+T T+EL+R S NA
Sbjct: 369 IRGLPIILNDFIPGQEVGNVPYVVDNGAGVFSKDPREAARQVARWFTTHTNELRRYSLNA 428
Query: 422 LKLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTASFTSII 462
LKLAQPEAV DIVKDIH L Q + R+PY LT+SF+ I
Sbjct: 429 LKLAQPEAVFDIVKDIHKLQQQPATVTRIPYSLTSSFSYSI 469
|
Involved in the synthesis of the major structural component of photosynthetic membranes. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|O81770|MGDG1_ARATH Monogalactosyldiacylglycerol synthase 1, chloroplastic OS=Arabidopsis thaliana GN=MGD1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 510 bits (1314), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/402 (61%), Positives = 312/402 (77%)
Query: 49 ESTVELMQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAG 108
E + L + A+R K VLILMSDTGGGHRASAEAIR AF EFGDEY++F+ D+ ++
Sbjct: 128 EEGLPLNGVEADRPKKVLILMSDTGGGHRASAEAIRAAFNQEFGDEYQVFITDLWTDHTP 187
Query: 109 WPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDII 168
WP N + RSY F+VKH LWK+ ++ TSP+ +H AA + + A+E+ GLM+Y+PDII
Sbjct: 188 WPFNQLPRSYNFLVKHGTLWKMTYYGTSPRIVHQSNFAATSTFIAREIAQGLMKYQPDII 247
Query: 169 ISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRAS 228
ISVHPLMQH+PL VL+ +GL KK++F TVITDL+TCHPTWFH V RCYCPS EVAKRA
Sbjct: 248 ISVHPLMQHVPLRVLRSKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPSTEVAKRAQ 307
Query: 229 YFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAM 288
GLE SQI+V+GLP+RPSFV+ V K LR EL MD LPAVLLMGGGEGMGP++ TA
Sbjct: 308 KAGLETSQIKVYGLPVRPSFVKPVRPKVELRRELGMDENLPAVLLMGGGEGMGPIEATAR 367
Query: 289 ALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCI 348
AL ++L DK G +GQ++IICGRN+ L S L S +WKIPV+V+GF T+ME+ MGACDCI
Sbjct: 368 ALADALYDKNLGEAVGQVLIICGRNKKLQSKLSSLDWKIPVQVKGFITKMEECMGACDCI 427
Query: 349 ITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFS 408
ITKAGPGTIAEA+IRGLPIILN YI GQE GNVPYVV+NG G F++SPKE ++IV +WF
Sbjct: 428 ITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVENGCGKFSKSPKEISKIVADWFG 487
Query: 409 TKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQRGPLARV 450
+ EL+ MS+NAL+LA+PEAV IV D+H+L ++ L ++
Sbjct: 488 PASKELEIMSQNALRLAKPEAVFKIVHDMHELVRKKNSLPQL 529
|
Involved in the synthesis of the major structural component of photosynthetic membranes. Required for proper thylakoid membrane biogenesis. Does not discriminate between prokaryotic (18:1/16:0) or eukaryotic (18:2/18:2) 1,2-diacylglycerol species, but operates with some preference for the prokaryotic one. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q9FZL4|MGDG_SOYBN Probable monogalactosyldiacylglycerol synthase, chloroplastic OS=Glycine max GN=MGD A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 509 bits (1311), Expect = e-143, Method: Compositional matrix adjust.
Identities = 247/406 (60%), Positives = 313/406 (77%)
Query: 42 DDCEEDDESTVELMQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKD 101
D+C + + E+ K VLILMSDTGGGHRASAEAI+ AF EFGD+Y++FV D
Sbjct: 118 DECGGVENEGFRGNGVEGEKPKKVLILMSDTGGGHRASAEAIKAAFYQEFGDDYQVFVTD 177
Query: 102 VCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLM 161
+ ++ WP N + RSY F+VKH LWK+ ++ T+P+ +H AA + A+EV GLM
Sbjct: 178 LWADHTPWPFNQLPRSYSFLVKHGPLWKMTYYGTAPRVVHQSNFAATGTFIAREVAKGLM 237
Query: 162 EYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSK 221
+Y+PDIIISVHPLMQH+PL +L+ +GL KK++F TVITDL+TCHPTWFH V RCYCP+
Sbjct: 238 KYQPDIIISVHPLMQHVPLRILRSKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTT 297
Query: 222 EVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMG 281
+VA+RA GL+ SQI++FGLP+RPSFV+ V KD LR EL MD LPAVLLMGGGEGMG
Sbjct: 298 DVAQRALKAGLQQSQIKIFGLPVRPSFVKPVQPKDELRRELGMDEDLPAVLLMGGGEGMG 357
Query: 282 PVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKW 341
P++ TA ALG+SL D+ G P+GQ+++ICGRN+ LA+ L S WK+PV+V+GF T+ME+
Sbjct: 358 PIEATARALGDSLYDENIGAPVGQILVICGRNKKLANKLSSINWKVPVQVKGFVTKMEEC 417
Query: 342 MGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETAR 401
MGACDCIITKAGPGTIAEA IRGLPIILNDYI GQE GNVPYVV+NG G F++SPK+ A+
Sbjct: 418 MGACDCIITKAGPGTIAEAQIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKSPKDIAK 477
Query: 402 IVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQRGPL 447
IV EWF K EL++MS+NAL+LA+P+AV IV D+H+L QR L
Sbjct: 478 IVAEWFGPKAYELQQMSQNALRLARPDAVFKIVHDLHELVRQRSYL 523
|
Involved in the synthesis of the major structural component of photosynthetic membranes. Glycine max (taxid: 3847) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|P93115|MGDG_CUCSA Monogalactosyldiacylglycerol synthase, chloroplastic OS=Cucumis sativus PE=1 SV=1 | Back alignment and function description |
|---|
Score = 503 bits (1294), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/404 (60%), Positives = 310/404 (76%)
Query: 41 DDDCEEDDESTVELMQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVK 100
DD + + L +I AE K VLILMSDTGGGHRASAEAI+ AF EFG+ Y++F+
Sbjct: 114 DDGFGVSQDGALPLNKIEAENPKRVLILMSDTGGGHRASAEAIKAAFNEEFGNNYQVFIT 173
Query: 101 DVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGL 160
D+ ++ WP N + RSY F+VKH LWK+ ++ T+PK IH AA + + A+EV GL
Sbjct: 174 DLWTDHTPWPFNQLPRSYNFLVKHGTLWKMTYYVTAPKVIHQSNFAATSTFIAREVAKGL 233
Query: 161 MEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPS 220
M+Y+PDIIISVHPLMQH+P+ +L+ +GL K++F TV+TDL+TCHPTWFH V RCYCPS
Sbjct: 234 MKYRPDIIISVHPLMQHVPIRILRSKGLLNKIVFTTVVTDLSTCHPTWFHKLVTRCYCPS 293
Query: 221 KEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGM 280
EVAKRA GL+ S+++VFGLP+RPSFV+ + K LR EL MD LPAVLLMGGGEGM
Sbjct: 294 TEVAKRALTAGLQPSKLKVFGLPVRPSFVKPIRPKIELRKELGMDENLPAVLLMGGGEGM 353
Query: 281 GPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEK 340
GP++ TA AL ++L D+ G PIGQ+++ICG N+ LA L+S +WK+PV+V+GF T+ME+
Sbjct: 354 GPIEATAKALSKALYDENHGEPIGQVLVICGHNKKLAGRLRSIDWKVPVQVKGFVTKMEE 413
Query: 341 WMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETA 400
MGACDCIITKAGPGTIAEA+IRGLPIILNDYI GQE GNVPYVV+NG G F++SPKE A
Sbjct: 414 CMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKSPKEIA 473
Query: 401 RIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQR 444
IV +WF K DEL MS+NAL+LA+P+AV IV D+H+L QR
Sbjct: 474 NIVAKWFGPKADELLIMSQNALRLARPDAVFKIVHDLHELVKQR 517
|
Involved in the synthesis of the major structural component of photosynthetic membranes. Cucumis sativus (taxid: 3659) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q9SM44|MGDG_SPIOL Monogalactosyldiacylglycerol synthase, chloroplastic OS=Spinacia oleracea GN=MGD A PE=1 SV=1 | Back alignment and function description |
|---|
Score = 502 bits (1293), Expect = e-141, Method: Compositional matrix adjust.
Identities = 246/405 (60%), Positives = 312/405 (77%)
Query: 40 SDDDCEEDDESTVELMQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFV 99
SD+ ++ V + + E K VLILMSDTGGGHRASAEAI+ AF EFGD+Y++FV
Sbjct: 108 SDNGHGVLEDVRVPVNAVEPESPKRVLILMSDTGGGHRASAEAIKAAFNEEFGDDYQVFV 167
Query: 100 KDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAG 159
D+ E+ WP N + RSY F+VKH LWK+ ++ TSP+ IH AA + + A+EV G
Sbjct: 168 TDLWSEHTPWPFNQLPRSYNFLVKHGPLWKMMYYGTSPRVIHQSNFAATSVFIAREVARG 227
Query: 160 LMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCP 219
LM+Y+PDIIISVHPLMQH+PL +L+ +GL +K++F TV+TDL+TCHPTWFH V RCYCP
Sbjct: 228 LMKYQPDIIISVHPLMQHVPLRILRGRGLLEKIVFTTVVTDLSTCHPTWFHKLVTRCYCP 287
Query: 220 SKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEG 279
S EVAKRA+ GL+ SQI+V+GLP+RPSFVR+V K+ LR EL MD LPAVLLMGGGEG
Sbjct: 288 SNEVAKRATKAGLQPSQIKVYGLPVRPSFVRSVRPKNELRKELGMDEHLPAVLLMGGGEG 347
Query: 280 MGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQME 339
MGP++ TA ALG +L D G P GQL++ICGRN+ LA L S +WKIPV+V+GF T++E
Sbjct: 348 MGPIEATARALGNALYDANLGEPTGQLLVICGRNKKLAGKLSSIDWKIPVQVKGFVTKIE 407
Query: 340 KWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKET 399
+ MGACDCIITKAGPGTIAEA+IRGLPIILNDYI GQE GNVPYV++NG G + +SPKE
Sbjct: 408 ECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVIENGIGKYLKSPKEI 467
Query: 400 ARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQR 444
A+ V++WF K +EL+ MS+NALK A+P+AV IV D+ +L Q+
Sbjct: 468 AKTVSQWFGPKANELQIMSQNALKHARPDAVFKIVHDLDELVRQK 512
|
Involved in the synthesis of the major structural component of photosynthetic membranes. The 1,2-diacylglycerol substrate preference is 18:2/18:2 > 18:0/18:1 > 18:1/18:1 > 18:1/16:0 > 16:0/18:2 > 18:3/18:3 > 16:0/18:1 > 16:0/16:0 > 18:0/18:0. Spinacia oleracea (taxid: 3562) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q9FZL3|MGDG_TOBAC Probable monogalactosyldiacylglycerol synthase, chloroplastic OS=Nicotiana tabacum GN=MGD A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 502 bits (1292), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/389 (62%), Positives = 309/389 (79%)
Query: 57 IGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMER 116
+ +E K VLILMSDTGGGHRASAEAIR AF EFGD+Y++F+ D+ E+ WP N + R
Sbjct: 139 VESEPPKKVLILMSDTGGGHRASAEAIRSAFNEEFGDKYQVFITDLWTEHTPWPFNQLPR 198
Query: 117 SYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQ 176
SY F+VKH LW++ +++T+P+ +H AA + + A+EV GLM+Y+PDIIISVHPLMQ
Sbjct: 199 SYNFLVKHGSLWRMTYYATAPRLVHQTNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQ 258
Query: 177 HIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQ 236
H+PL +L+ +GL KK+IF TVITDL+TCHPTWFH V RCYCPS+EVAKRA GL+ Q
Sbjct: 259 HVPLRILRSKGLLKKIIFTTVITDLSTCHPTWFHKLVTRCYCPSEEVAKRALRAGLKPYQ 318
Query: 237 IRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLD 296
++V+GLP+RPSFV+ V K LR EL M+ LPAVLLMGGGEGMGP++ TA ALG++L D
Sbjct: 319 LKVYGLPVRPSFVKPVPPKVELRKELGMEEHLPAVLLMGGGEGMGPIEATARALGDALYD 378
Query: 297 KETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGT 356
+ G PIGQ+++ICGRN+ L + L S +WKIPV+V+GF T+ME+ MGACDCIITKAGPGT
Sbjct: 379 EIHGEPIGQVLVICGRNKKLFNRLTSVQWKIPVQVKGFVTKMEECMGACDCIITKAGPGT 438
Query: 357 IAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKR 416
IAEA+IRGLPIILNDYI GQE GNVPYV++NG G F++SPK+ A IV +WF + DEL+
Sbjct: 439 IAEAVIRGLPIILNDYIAGQEAGNVPYVIENGCGKFSKSPKKIANIVAQWFGPRQDELRI 498
Query: 417 MSENALKLAQPEAVVDIVKDIHDLAAQRG 445
MS+NAL+LA+P+AV IV D+H+L QR
Sbjct: 499 MSQNALRLARPDAVFKIVHDMHELVRQRN 527
|
Involved in the synthesis of the major structural component of photosynthetic membranes. Nicotiana tabacum (taxid: 4097) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 462 | ||||||
| 449443037 | 457 | PREDICTED: monogalactosyldiacylglycerol | 0.989 | 1.0 | 0.806 | 0.0 | |
| 225446219 | 453 | PREDICTED: monogalactosyldiacylglycerol | 0.980 | 1.0 | 0.816 | 0.0 | |
| 255579843 | 470 | 1,2-diacylglycerol 3-beta-galactosyltran | 0.995 | 0.978 | 0.809 | 0.0 | |
| 224142541 | 474 | predicted protein [Populus trichocarpa] | 0.889 | 0.867 | 0.880 | 0.0 | |
| 224120322 | 411 | predicted protein [Populus trichocarpa] | 0.889 | 1.0 | 0.871 | 0.0 | |
| 297808107 | 468 | hypothetical protein ARALYDRAFT_488950 [ | 0.974 | 0.961 | 0.786 | 0.0 | |
| 30687800 | 468 | Monogalactosyldiacylglycerol synthase 2 | 0.974 | 0.961 | 0.778 | 0.0 | |
| 147852595 | 437 | hypothetical protein VITISV_009935 [Viti | 0.945 | 1.0 | 0.787 | 0.0 | |
| 356562943 | 456 | PREDICTED: monogalactosyldiacylglycerol | 0.954 | 0.967 | 0.797 | 0.0 | |
| 356546136 | 453 | PREDICTED: monogalactosyldiacylglycerol | 0.980 | 1.0 | 0.772 | 0.0 |
| >gi|449443037|ref|XP_004139287.1| PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like [Cucumis sativus] gi|449518459|ref|XP_004166259.1| PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/460 (80%), Positives = 411/460 (89%), Gaps = 3/460 (0%)
Query: 3 MTVAYPKKAVSLTEKVLQRVYGNHSTSSSSNLGCSFDSDDDCEEDDESTVELMQIGAERT 62
M+VA P+ S+TEKV QRV G++ SS+ + +DC +DD+ T+E++QIGAERT
Sbjct: 1 MSVATPR---SITEKVFQRVGGHYQWSSTHKFFGNDGRVEDCFDDDDGTLEMVQIGAERT 57
Query: 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMV 122
KNVLILMSDTGGGHRASAEAIRDAF+IEFGDEY+IFVKDV KEY GWPLNDMERSYKFMV
Sbjct: 58 KNVLILMSDTGGGHRASAEAIRDAFRIEFGDEYQIFVKDVWKEYTGWPLNDMERSYKFMV 117
Query: 123 KHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWV 182
KHVQLWKVAFHSTSP+WIHS YLAA+AAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWV
Sbjct: 118 KHVQLWKVAFHSTSPRWIHSVYLAAIAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWV 177
Query: 183 LKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGL 242
LKWQGLQKKV+FVTVITDLNTCHPTWFHP VNRCYCPS+ VAKRA G+E SQ+RV+GL
Sbjct: 178 LKWQGLQKKVVFVTVITDLNTCHPTWFHPGVNRCYCPSEAVAKRALLDGIEESQVRVYGL 237
Query: 243 PIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRP 302
PIRPSF RAV+ KD LR EL+MDP LPAVLLMGGGEGMGPVK+TA AL ESL DKE +P
Sbjct: 238 PIRPSFARAVLQKDQLRGELEMDPDLPAVLLMGGGEGMGPVKKTAKALAESLYDKENEKP 297
Query: 303 IGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALI 362
IGQL+IICGRN+ LASTL++ EWKIPVKVRGFE QMEKWMGACDCIITKAGPGTIAEALI
Sbjct: 298 IGQLVIICGRNKPLASTLEAFEWKIPVKVRGFEKQMEKWMGACDCIITKAGPGTIAEALI 357
Query: 363 RGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENAL 422
RGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETA+IV EWFSTKT++ S+NAL
Sbjct: 358 RGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETAKIVAEWFSTKTEQFHTTSQNAL 417
Query: 423 KLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTASFTSII 462
KLAQPEAV DIV+DIHDLA QRGP+A +PYMLT+SFT++I
Sbjct: 418 KLAQPEAVFDIVRDIHDLACQRGPMANIPYMLTSSFTTLI 457
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446219|ref|XP_002263443.1| PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/462 (81%), Positives = 416/462 (90%), Gaps = 9/462 (1%)
Query: 1 MVMTVAYPKKAVSLTEKVLQRVYGNHSTSSSSNLGCSFDSDDDCEEDDESTVELMQIGAE 60
M M++ P+K S+ E V Q+V G +S S CS D C +DD T+EL+QIGAE
Sbjct: 1 MAMSLLSPRK--SIAETVFQKVGGYYSGSGHRR--CS----DGCMDDD-GTMELVQIGAE 51
Query: 61 RTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKF 120
RTKNVLILMSDTGGGHRASAEAIRDAF+ EFGDEYRIFVKDV KEY GWPLNDMERSYKF
Sbjct: 52 RTKNVLILMSDTGGGHRASAEAIRDAFQSEFGDEYRIFVKDVWKEYTGWPLNDMERSYKF 111
Query: 121 MVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPL 180
MV+HVQLWKVAFHSTSP+WIHS YLAA+AAYYAKEVEAGLMEYKPDIIISVHPLMQHIPL
Sbjct: 112 MVRHVQLWKVAFHSTSPRWIHSVYLAAIAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPL 171
Query: 181 WVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVF 240
WVLKWQGLQKKV+FVTVITDLNTCH TWFHP V+RCYCPS+EVAKR+ GLE SQ+RVF
Sbjct: 172 WVLKWQGLQKKVVFVTVITDLNTCHRTWFHPGVSRCYCPSEEVAKRSLLDGLEESQVRVF 231
Query: 241 GLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETG 300
GLPIRPSF RAV+SKD+LR+EL+MDP LPAVLLMGGGEGMGPVK+TA+ALGESLLD+ +G
Sbjct: 232 GLPIRPSFCRAVLSKDDLRVELEMDPHLPAVLLMGGGEGMGPVKKTALALGESLLDEGSG 291
Query: 301 RPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEA 360
+PIGQLI+ICGRN+ LASTL++ +WKIPVKV+GF+TQMEKWMGACDCIITKAGPGTIAEA
Sbjct: 292 KPIGQLIVICGRNKVLASTLEAVDWKIPVKVKGFQTQMEKWMGACDCIITKAGPGTIAEA 351
Query: 361 LIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSEN 420
LIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRS KETAR+V EWFSTKT+ELKRMSEN
Sbjct: 352 LIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSSKETARLVAEWFSTKTEELKRMSEN 411
Query: 421 ALKLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTASFTSII 462
ALKLAQP AV DIVKDIH+LA QRGPLA +PYMLT+SFTSII
Sbjct: 412 ALKLAQPNAVFDIVKDIHELACQRGPLANIPYMLTSSFTSII 453
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255579843|ref|XP_002530758.1| 1,2-diacylglycerol 3-beta-galactosyltransferase, putative [Ricinus communis] gi|223529674|gb|EEF31618.1| 1,2-diacylglycerol 3-beta-galactosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/472 (80%), Positives = 415/472 (87%), Gaps = 12/472 (2%)
Query: 1 MVMTVAYPKKAVSLTEKVLQRVYGNHSTSSSSNLGCS----------FDSDDDCEEDDES 50
MVM VA P+KA SLTE VLQRVYGN ++SSS S +D E+++
Sbjct: 1 MVMKVASPRKA-SLTE-VLQRVYGNFGSNSSSYSNHSNNHHQVKKYYIHESEDDFEEEDG 58
Query: 51 TVELMQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWP 110
T+EL+QIGAERTKNVLILMSDTGGGHRASAEAIRDAFK+E+GDEYRI VKDV KEY GWP
Sbjct: 59 TMELVQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKLEYGDEYRIIVKDVWKEYTGWP 118
Query: 111 LNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIIS 170
LNDMER YKFMVKHVQLWKVAFHSTSP+WIHSCYLAA+AAYYAKEVEAGLMEYKPDIIIS
Sbjct: 119 LNDMERQYKFMVKHVQLWKVAFHSTSPRWIHSCYLAAIAAYYAKEVEAGLMEYKPDIIIS 178
Query: 171 VHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYF 230
VHPLMQHIPLWVLKWQGLQKKV+FVTVITDLNTCHPTWFHP VNRCYCPSKEVAKRA
Sbjct: 179 VHPLMQHIPLWVLKWQGLQKKVVFVTVITDLNTCHPTWFHPGVNRCYCPSKEVAKRALLD 238
Query: 231 GLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMAL 290
GL+ SQIRVFGLPIRPSF RA SKD+LR EL+MDP LPAVLLMGGGEGMGPVK+TA AL
Sbjct: 239 GLDESQIRVFGLPIRPSFARAAFSKDDLREELEMDPHLPAVLLMGGGEGMGPVKKTAEAL 298
Query: 291 GESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIIT 350
G+SL DKE G+PIGQLIIICGRN+ L STL+S +W +PVKVR FETQMEKWMGACDCIIT
Sbjct: 299 GQSLFDKELGKPIGQLIIICGRNKVLKSTLESADWNVPVKVRAFETQMEKWMGACDCIIT 358
Query: 351 KAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTK 410
KAGPGTIAEALIRGLPI+LNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWF+TK
Sbjct: 359 KAGPGTIAEALIRGLPIVLNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFTTK 418
Query: 411 TDELKRMSENALKLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTASFTSII 462
TDE K SEN+LKLAQPEAV DIV+DIH LA +RGPLA +PY+LT+SFT +I
Sbjct: 419 TDEFKTTSENSLKLAQPEAVFDIVRDIHQLAQERGPLANIPYILTSSFTGLI 470
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224142541|ref|XP_002324614.1| predicted protein [Populus trichocarpa] gi|222866048|gb|EEF03179.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/411 (88%), Positives = 384/411 (93%)
Query: 52 VELMQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPL 111
+EL+QIGAERTKNVLILMSDTGGGHRASAEAIRDAFK+E+GDEYRI VKDV KEY GWPL
Sbjct: 64 LELVQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKLEYGDEYRIIVKDVWKEYTGWPL 123
Query: 112 NDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISV 171
NDMER YKFMVKHVQLWKVAFHSTSP+WIHSCYLAA+AAYYAKEVEAGLMEYKPDIIISV
Sbjct: 124 NDMERQYKFMVKHVQLWKVAFHSTSPRWIHSCYLAAIAAYYAKEVEAGLMEYKPDIIISV 183
Query: 172 HPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFG 231
HPLMQHIPLWVLKWQGLQK+VIF TVITDLN+CHPTWFHP VNRCYCPSKEVAKRA+ G
Sbjct: 184 HPLMQHIPLWVLKWQGLQKQVIFATVITDLNSCHPTWFHPGVNRCYCPSKEVAKRAALDG 243
Query: 232 LEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALG 291
LE SQIRVFGLPIRPSF AV+SKD LR EL++DP LPAVLLMGGGEGMGPVK+TA+ALG
Sbjct: 244 LEDSQIRVFGLPIRPSFALAVLSKDELREELELDPDLPAVLLMGGGEGMGPVKKTALALG 303
Query: 292 ESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITK 351
ESL DKE G+P+GQLIIICGRN+ L STL+S EW IPVKVRGFETQMEKWMGACDCIITK
Sbjct: 304 ESLFDKELGKPLGQLIIICGRNKALKSTLESHEWTIPVKVRGFETQMEKWMGACDCIITK 363
Query: 352 AGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKT 411
AGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIV EWFSTKT
Sbjct: 364 AGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVKEWFSTKT 423
Query: 412 DELKRMSENALKLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTASFTSII 462
DE KRMSENALKLAQPEAV DIVKDIH+LA RGPLA +PY+LT+SF SII
Sbjct: 424 DERKRMSENALKLAQPEAVFDIVKDIHELAQARGPLANIPYILTSSFASII 474
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224120322|ref|XP_002331019.1| predicted protein [Populus trichocarpa] gi|222872949|gb|EEF10080.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/411 (87%), Positives = 385/411 (93%)
Query: 52 VELMQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPL 111
+EL+QIGAER KNVLILMSDTGGGHRASAEAIRDAFK+E+GDEYRI VKDV KEY GWPL
Sbjct: 1 MELVQIGAERAKNVLILMSDTGGGHRASAEAIRDAFKLEYGDEYRIIVKDVWKEYTGWPL 60
Query: 112 NDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISV 171
NDMER YKFMVKHVQLWKVAFHSTSP+WIHS YLAA+AAYYAKEVEAGLMEYKPDIIISV
Sbjct: 61 NDMERQYKFMVKHVQLWKVAFHSTSPRWIHSSYLAAIAAYYAKEVEAGLMEYKPDIIISV 120
Query: 172 HPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFG 231
HP+MQHIPLWVLKWQGLQKKVIFVTVITDLN+CHPTWFHP VNRC+CPS+EVAKRA+ G
Sbjct: 121 HPMMQHIPLWVLKWQGLQKKVIFVTVITDLNSCHPTWFHPGVNRCFCPSEEVAKRAALDG 180
Query: 232 LEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALG 291
LE SQIRVFGLPIRPSF RAV+SKD LR EL++DP LPAVLLMGGGEGMGPVK+TA+ALG
Sbjct: 181 LEDSQIRVFGLPIRPSFARAVLSKDELREELELDPSLPAVLLMGGGEGMGPVKKTALALG 240
Query: 292 ESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITK 351
ESL DKE G+P+GQLIIICGRN+ L STL+S EW IPVKVRGFETQMEKWMGACDCIITK
Sbjct: 241 ESLFDKELGKPLGQLIIICGRNKVLKSTLESHEWTIPVKVRGFETQMEKWMGACDCIITK 300
Query: 352 AGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKT 411
AGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETA+IVTEWF +KT
Sbjct: 301 AGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETAKIVTEWFCSKT 360
Query: 412 DELKRMSENALKLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTASFTSII 462
DEL+RMSENALKLAQPEAV DI+KDIH+LA RGPL +PY+LTASFTSII
Sbjct: 361 DELERMSENALKLAQPEAVFDIIKDIHELAQARGPLVNIPYVLTASFTSII 411
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297808107|ref|XP_002871937.1| hypothetical protein ARALYDRAFT_488950 [Arabidopsis lyrata subsp. lyrata] gi|297317774|gb|EFH48196.1| hypothetical protein ARALYDRAFT_488950 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/464 (78%), Positives = 403/464 (86%), Gaps = 14/464 (3%)
Query: 12 VSLTEKVLQRVYGNHSTSSSSNLGCS-------------FDSDDDCEEDDESTVELMQIG 58
+SL EKVL+RVYG ++ S G S S DD +ED ES++EL+QIG
Sbjct: 6 MSLAEKVLERVYGTSKSAVSVAGGESEKTHRHTHHHIHRSKSYDDSDED-ESSMELVQIG 64
Query: 59 AERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSY 118
AERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGD+YRI VKDV KEY GWPLNDMERSY
Sbjct: 65 AERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDKYRIIVKDVWKEYTGWPLNDMERSY 124
Query: 119 KFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHI 178
KFMVKHVQLWKVAFHSTSPKWIHSCYLAA+AAYYAKEVEAGLMEYKP+IIISVHPLMQHI
Sbjct: 125 KFMVKHVQLWKVAFHSTSPKWIHSCYLAAIAAYYAKEVEAGLMEYKPEIIISVHPLMQHI 184
Query: 179 PLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIR 238
PLWVLKWQ LQK+V+FVTVITDLNTCHPTWFHP VNRCYCPS+EVA+RA + GL+ SQ+R
Sbjct: 185 PLWVLKWQELQKRVLFVTVITDLNTCHPTWFHPGVNRCYCPSQEVAERALFDGLDESQVR 244
Query: 239 VFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKE 298
VFGLP+RPSF RAV+ KD+LR EL+MD L AVLLMGGGEGMGPVKETA AL E L DKE
Sbjct: 245 VFGLPVRPSFARAVLVKDDLRKELEMDQDLRAVLLMGGGEGMGPVKETAKALEEFLYDKE 304
Query: 299 TGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIA 358
+PIGQ+++ICGRN+ LAS L++ EWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIA
Sbjct: 305 NRKPIGQMVVICGRNKKLASALEAIEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIA 364
Query: 359 EALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMS 418
E+LIR LPIILNDYIPGQEKGNVPYVV+NGAGVFTRSPKETARIV EWFSTKTDEL++ S
Sbjct: 365 ESLIRSLPIILNDYIPGQEKGNVPYVVENGAGVFTRSPKETARIVGEWFSTKTDELEQTS 424
Query: 419 ENALKLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTASFTSII 462
ENA KLAQPEAV DIVKDI +L+ QRGPLA V Y LT+SF S++
Sbjct: 425 ENARKLAQPEAVFDIVKDIDELSEQRGPLANVSYTLTSSFASLV 468
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30687800|ref|NP_568394.2| Monogalactosyldiacylglycerol synthase 2 [Arabidopsis thaliana] gi|75100766|sp|O82730.1|MGDG2_ARATH RecName: Full=Monogalactosyldiacylglycerol synthase 2, chloroplastic; Short=AtMGD2; AltName: Full=MGDG synthase type B; Flags: Precursor gi|3367638|emb|CAA04005.1| monogalactosyldiacylglycerol synthase [Arabidopsis thaliana] gi|332005457|gb|AED92840.1| Monogalactosyldiacylglycerol synthase 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/464 (77%), Positives = 402/464 (86%), Gaps = 14/464 (3%)
Query: 12 VSLTEKVLQRVYGNHSTSSSSNLG-------------CSFDSDDDCEEDDESTVELMQIG 58
++L EKVL+RVYG ++ S G S DD +ED ES++EL+QIG
Sbjct: 6 MALAEKVLERVYGTSKSAVSVTSGDGEKTHRHTHHHIHRIKSYDDIDED-ESSLELIQIG 64
Query: 59 AERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSY 118
AERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGD+YR+ VKDV KEY GWPLNDMERSY
Sbjct: 65 AERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDKYRVIVKDVWKEYTGWPLNDMERSY 124
Query: 119 KFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHI 178
KFMVKHVQLWKVAFHSTSPKWIHSCYLAA+AAYYAKEVEAGLMEYKP+IIISVHPLMQHI
Sbjct: 125 KFMVKHVQLWKVAFHSTSPKWIHSCYLAAIAAYYAKEVEAGLMEYKPEIIISVHPLMQHI 184
Query: 179 PLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIR 238
PLWVLKWQ LQK+V+FVTVITDLNTCHPTWFHP VNRCYCPS+EVAKRA + GL+ SQ+R
Sbjct: 185 PLWVLKWQELQKRVLFVTVITDLNTCHPTWFHPGVNRCYCPSQEVAKRALFDGLDESQVR 244
Query: 239 VFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKE 298
VFGLP+RPSF RAV+ KD+LR EL+MD L AVLLMGGGEGMGPVKETA AL E L DKE
Sbjct: 245 VFGLPVRPSFARAVLVKDDLRKELEMDQDLRAVLLMGGGEGMGPVKETAKALEEFLYDKE 304
Query: 299 TGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIA 358
+PIGQ+++ICGRN+ LAS L++ +WKIPVKVRGFETQMEKWMGACDCIITKAGPGTIA
Sbjct: 305 NRKPIGQMVVICGRNKKLASALEAIDWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIA 364
Query: 359 EALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMS 418
E+LIR LPIILNDYIPGQEKGNVPYVV+NGAGVFTRSPKETARIV EWFSTKTDEL++ S
Sbjct: 365 ESLIRSLPIILNDYIPGQEKGNVPYVVENGAGVFTRSPKETARIVGEWFSTKTDELEQTS 424
Query: 419 ENALKLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTASFTSII 462
+NA KLAQPEAV DIVKDI +L+ QRGPLA V Y LT+SF S++
Sbjct: 425 DNARKLAQPEAVFDIVKDIDELSEQRGPLASVSYNLTSSFASLV 468
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147852595|emb|CAN81686.1| hypothetical protein VITISV_009935 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/462 (78%), Positives = 401/462 (86%), Gaps = 25/462 (5%)
Query: 1 MVMTVAYPKKAVSLTEKVLQRVYGNHSTSSSSNLGCSFDSDDDCEEDDESTVELMQIGAE 60
M M++ P+K S+ E V Q+V G +S S CS D C ++D T+EL+QIGAE
Sbjct: 1 MAMSLLSPRK--SIAETVFQKVGGYYSGSGHRR--CS----DGCMDED-GTMELVQIGAE 51
Query: 61 RTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKF 120
RTKNVLILMSDTGGGHRASAEAIRDAF+ EFGDEYRIFVKDV KEY GWPLNDMERSYKF
Sbjct: 52 RTKNVLILMSDTGGGHRASAEAIRDAFQSEFGDEYRIFVKDVWKEYTGWPLNDMERSYKF 111
Query: 121 MVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPL 180
MV+HVQLWKVAFHSTSP+WIHS YLAA+AAYYAKEVEAGLMEYKPDIIISVHPLMQHIPL
Sbjct: 112 MVRHVQLWKVAFHSTSPRWIHSVYLAAIAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPL 171
Query: 181 WVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVF 240
WVLKWQGLQKKV+FVTVITDLNTCH TWFHP V+RCYCPS+EVAKR+ GLE SQ+RVF
Sbjct: 172 WVLKWQGLQKKVVFVTVITDLNTCHRTWFHPGVSRCYCPSEEVAKRSLLDGLEESQVRVF 231
Query: 241 GLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETG 300
GLPIRPSF RAV+SKD+LR+EL+MDP LPAVLLMGGGEGMGPVK+TA+ALGESL D+ +G
Sbjct: 232 GLPIRPSFCRAVLSKDDLRVELEMDPHLPAVLLMGGGEGMGPVKKTALALGESLXDEGSG 291
Query: 301 RPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEA 360
+PIGQLI+ICGRN KV+GF+TQMEKWMGACDCIITKAGPGTIAEA
Sbjct: 292 KPIGQLIVICGRN----------------KVKGFQTQMEKWMGACDCIITKAGPGTIAEA 335
Query: 361 LIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSEN 420
LIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRS KETAR+V EWFSTKT+ELKRM+EN
Sbjct: 336 LIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSSKETARLVAEWFSTKTEELKRMAEN 395
Query: 421 ALKLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTASFTSII 462
ALKLAQP AV DIVKDIH+LA QRGPLA +PYMLT+SFTSII
Sbjct: 396 ALKLAQPNAVFDIVKDIHELACQRGPLANIPYMLTSSFTSII 437
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356562943|ref|XP_003549727.1| PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/445 (79%), Positives = 395/445 (88%), Gaps = 4/445 (0%)
Query: 18 VLQRVYGNHSTSSSSNLGCSFDSDDDCEEDDESTVELMQIGAERTKNVLILMSDTGGGHR 77
+ ++V+G + ++S+ ++ DD D + +ELM+IGAERTKNVLILMSDTGGGHR
Sbjct: 16 IAEKVFGGYYNGNNSHKKRGSEAHDD---DSDGGMELMEIGAERTKNVLILMSDTGGGHR 72
Query: 78 ASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSP 137
ASAEAIRDAF+I+FGDEYRIFVKDV KEY GWPLNDME YKFMVKHVQLW VAFHSTSP
Sbjct: 73 ASAEAIRDAFQIQFGDEYRIFVKDVWKEYTGWPLNDMEGQYKFMVKHVQLWNVAFHSTSP 132
Query: 138 KWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTV 197
+WIHS YLAA+AAYYA+EVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTV
Sbjct: 133 RWIHSVYLAAIAAYYAREVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTV 192
Query: 198 ITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDN 257
ITDL+TCHPTWFHP VNRCYCPS+EVA +AS GLE SQIRVFGLPIRPSF RAV+ K+
Sbjct: 193 ITDLSTCHPTWFHPWVNRCYCPSQEVATKASQDGLEESQIRVFGLPIRPSFARAVLVKEQ 252
Query: 258 LRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLA 317
LR EL +DP L AVLLMGGGEGMGPVK+TA ALGE+L DKE +PIGQLIIICGRN++L
Sbjct: 253 LREELGLDPNLQAVLLMGGGEGMGPVKKTAKALGEALFDKEAEKPIGQLIIICGRNKSLV 312
Query: 318 STLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQE 377
STL+S EWKIPVKVRGFETQM KWMGACDCIITKAGPGTIAE+LIRGLPIILNDYIPGQE
Sbjct: 313 STLESLEWKIPVKVRGFETQMAKWMGACDCIITKAGPGTIAESLIRGLPIILNDYIPGQE 372
Query: 378 KGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDI 437
KGNVPYVV+NGAGVFTRSPKETARIV EWF+TK+DE K MSENALKLAQPEAV DIV+DI
Sbjct: 373 KGNVPYVVNNGAGVFTRSPKETARIVAEWFTTKSDERKTMSENALKLAQPEAVFDIVRDI 432
Query: 438 HDLAAQRGPLARVPYMLTASFTSII 462
H+LA QR P A+ PY+LT+SFTS+I
Sbjct: 433 HELAEQREP-AKFPYLLTSSFTSLI 456
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356546136|ref|XP_003541487.1| PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/462 (77%), Positives = 401/462 (86%), Gaps = 9/462 (1%)
Query: 1 MVMTVAYPKKAVSLTEKVLQRVYGNHSTSSSSNLGCSFDSDDDCEEDDESTVELMQIGAE 60
M ++V+ P + + + ++V+G + ++S+ ++ DD D + +ELM+IGA+
Sbjct: 1 MEVSVSSPPR-----KSIAEKVFGGYYNGNNSHKKRGSEAHDD---DSDGGMELMEIGAQ 52
Query: 61 RTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKF 120
RTKNVLILMSDTGGGHRASAEAIRDAF+I+FGDEYRIFVKDV KEY GWPLNDME YKF
Sbjct: 53 RTKNVLILMSDTGGGHRASAEAIRDAFQIQFGDEYRIFVKDVWKEYTGWPLNDMEGQYKF 112
Query: 121 MVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPL 180
MVKHVQLW VAFHSTSP+WIHS YLAA+AAYYA+EVEAGLMEYKPDIIISVHPLMQHIPL
Sbjct: 113 MVKHVQLWNVAFHSTSPRWIHSVYLAAIAAYYAREVEAGLMEYKPDIIISVHPLMQHIPL 172
Query: 181 WVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVF 240
WVLKWQGLQKKVIFVTVITDL+TCHPTWFHP VNRCYCPS+EVA +AS GLE SQIRVF
Sbjct: 173 WVLKWQGLQKKVIFVTVITDLSTCHPTWFHPWVNRCYCPSQEVATKASQDGLEESQIRVF 232
Query: 241 GLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETG 300
GLPIRPSF RAV+ KD LR EL +D L AVLLMGGGEGMGPVK+TA ALGE+L DKE
Sbjct: 233 GLPIRPSFARAVLVKDQLREELGLDHNLQAVLLMGGGEGMGPVKKTAKALGEALFDKEAE 292
Query: 301 RPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEA 360
+PIGQL+IICGRN++L STL+S EWKIPVKVRGFETQM KWMGACDCIITKAGPGTIAEA
Sbjct: 293 KPIGQLVIICGRNKSLVSTLESLEWKIPVKVRGFETQMAKWMGACDCIITKAGPGTIAEA 352
Query: 361 LIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSEN 420
LIRGLPIILNDYIPGQEKGNVPYVV+NGAGVFTRSPKETARIV EWF+TK+DE K MSEN
Sbjct: 353 LIRGLPIILNDYIPGQEKGNVPYVVNNGAGVFTRSPKETARIVAEWFTTKSDERKTMSEN 412
Query: 421 ALKLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTASFTSII 462
ALKLAQPEAV DIV+DIH+LA QR P A PY+LT+SFTS+I
Sbjct: 413 ALKLAQPEAVFDIVRDIHELAEQREP-ANFPYLLTSSFTSLI 453
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 462 | ||||||
| TAIR|locus:2149274 | 468 | MGD2 "monogalactosyldiacylglyc | 0.976 | 0.963 | 0.764 | 2.9e-190 | |
| TAIR|locus:2052662 | 465 | MGDC "monogalactosyldiacylglyc | 0.967 | 0.961 | 0.726 | 2.7e-178 | |
| UNIPROTKB|Q7XZR6 | 358 | OsMGD "Putative monogalactosyl | 0.746 | 0.963 | 0.779 | 2e-150 | |
| TAIR|locus:2124844 | 533 | MGD1 "monogalactosyl diacylgly | 0.852 | 0.739 | 0.626 | 5.2e-136 | |
| UNIPROTKB|P54166 | 382 | ugtP "Processive diacylglycero | 0.779 | 0.942 | 0.269 | 1.1e-26 | |
| UNIPROTKB|Q81YW9 | 388 | ugtP "Processive diacylglycero | 0.759 | 0.904 | 0.277 | 2.5e-23 | |
| TIGR_CMR|BA_0511 | 388 | BA_0511 "conserved hypothetica | 0.759 | 0.904 | 0.277 | 2.5e-23 | |
| TIGR_CMR|CHY_1043 | 367 | CHY_1043 "putative glycosyl tr | 0.493 | 0.621 | 0.299 | 6e-20 | |
| TIGR_CMR|CBU_0135 | 358 | CBU_0135 "UDP-N-acetylglucosam | 0.417 | 0.539 | 0.248 | 1.8e-06 |
| TAIR|locus:2149274 MGD2 "monogalactosyldiacylglycerol synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1844 (654.2 bits), Expect = 2.9e-190, P = 2.9e-190
Identities = 354/463 (76%), Positives = 394/463 (85%)
Query: 12 VSLTEKVLQRVYGNHSTSSSSNLGXXXXXXXXXXXXXX------------XTVELMQIGA 59
++L EKVL+RVYG ++ S G ++EL+QIGA
Sbjct: 6 MALAEKVLERVYGTSKSAVSVTSGDGEKTHRHTHHHIHRIKSYDDIDEDESSLELIQIGA 65
Query: 60 ERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYK 119
ERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGD+YR+ VKDV KEY GWPLNDMERSYK
Sbjct: 66 ERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDKYRVIVKDVWKEYTGWPLNDMERSYK 125
Query: 120 FMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIP 179
FMVKHVQLWKVAFHSTSPKWIHSCYLAA+AAYYAKEVEAGLMEYKP+IIISVHPLMQHIP
Sbjct: 126 FMVKHVQLWKVAFHSTSPKWIHSCYLAAIAAYYAKEVEAGLMEYKPEIIISVHPLMQHIP 185
Query: 180 LWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRV 239
LWVLKWQ LQK+V+FVTVITDLNTCHPTWFHP VNRCYCPS+EVAKRA + GL+ SQ+RV
Sbjct: 186 LWVLKWQELQKRVLFVTVITDLNTCHPTWFHPGVNRCYCPSQEVAKRALFDGLDESQVRV 245
Query: 240 FGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKET 299
FGLP+RPSF RAV+ KD+LR EL+MD L AVLLMGGGEGMGPVKETA AL E L DKE
Sbjct: 246 FGLPVRPSFARAVLVKDDLRKELEMDQDLRAVLLMGGGEGMGPVKETAKALEEFLYDKEN 305
Query: 300 GRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAE 359
+PIGQ+++ICGRN+ LAS L++ +WKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAE
Sbjct: 306 RKPIGQMVVICGRNKKLASALEAIDWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAE 365
Query: 360 ALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSE 419
+LIR LPIILNDYIPGQEKGNVPYVV+NGAGVFTRSPKETARIV EWFSTKTDEL++ S+
Sbjct: 366 SLIRSLPIILNDYIPGQEKGNVPYVVENGAGVFTRSPKETARIVGEWFSTKTDELEQTSD 425
Query: 420 NALKLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTASFTSII 462
NA KLAQPEAV DIVKDI +L+ QRGPLA V Y LT+SF S++
Sbjct: 426 NARKLAQPEAVFDIVKDIDELSEQRGPLASVSYNLTSSFASLV 468
|
|
| TAIR|locus:2052662 MGDC "monogalactosyldiacylglycerol synthase type C" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1731 (614.4 bits), Expect = 2.7e-178, P = 2.7e-178
Identities = 335/461 (72%), Positives = 378/461 (81%)
Query: 2 VMTVAYPK-KAVSLTEKVLQRVYGNHSTSS----------SSNLGXXXXXXXXXXXXXXX 50
+M V P+ ++ S+TEKV +RVY N + S+ SS+
Sbjct: 1 MMKVVSPRTRSDSITEKVFRRVYSNFNISTVEDEYIHRQRSSDYEKESRLRKRGLEDKEE 60
Query: 51 TVELMQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWP 110
+E+ Q+GAER K VLILMSDTGGGHRASAEAIRDAFKIEFGD+YRI +KDV KEY GWP
Sbjct: 61 VMEMEQMGAERIKTVLILMSDTGGGHRASAEAIRDAFKIEFGDDYRIIIKDVWKEYTGWP 120
Query: 111 LNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIIS 170
LNDMER YKFMVKHV LW VAFH TSPKWIH YL+A+AAYYAKE+EAGLMEYKPDIIIS
Sbjct: 121 LNDMERQYKFMVKHVGLWSVAFHGTSPKWIHKSYLSALAAYYAKEIEAGLMEYKPDIIIS 180
Query: 171 VHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYF 230
VHPLMQHIPLWV+KWQGL KKVIFVTVITDLNTCH TWFH V+RCYCPSKEVAKRA
Sbjct: 181 VHPLMQHIPLWVMKWQGLHKKVIFVTVITDLNTCHRTWFHHGVSRCYCPSKEVAKRALVD 240
Query: 231 GLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMAL 290
GL+ SQIRVFGLP+RPSF R +++K+ LR EL++D LPAVLLMGGGEGMGPV++TA+AL
Sbjct: 241 GLDDSQIRVFGLPVRPSFPRTILNKNELRKELEIDLNLPAVLLMGGGEGMGPVQKTALAL 300
Query: 291 GESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIIT 350
G+SL + + PIGQLI+ICGRN+ LASTL S EWKIPVKVRGFETQMEKWMGACDCIIT
Sbjct: 301 GDSLYNSKESNPIGQLIVICGRNKVLASTLASHEWKIPVKVRGFETQMEKWMGACDCIIT 360
Query: 351 KAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTK 410
KAGPGTIAEALI GLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETA+IV +WFS
Sbjct: 361 KAGPGTIAEALICGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETAKIVADWFSNN 420
Query: 411 TDELKRMSENALKLAQPEAVVDIVKDIHDLAAQRGPLARVP 451
+ELK+MSENALKL+QPEAV DIVKDIH L+ Q+ R+P
Sbjct: 421 KEELKKMSENALKLSQPEAVFDIVKDIHHLSQQQ---QRIP 458
|
|
| UNIPROTKB|Q7XZR6 OsMGD "Putative monogalactosyldiacylglycerol synthase" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
|---|
Score = 1468 (521.8 bits), Expect = 2.0e-150, P = 2.0e-150
Identities = 269/345 (77%), Positives = 312/345 (90%)
Query: 114 MERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHP 173
ME SYKFMVKHVQLWKVAFH+TSP+W+H YLAA+A++YAK+VEAGL +YKPDIIISVHP
Sbjct: 1 MESSYKFMVKHVQLWKVAFHTTSPRWVHCFYLAALASFYAKKVEAGLKKYKPDIIISVHP 60
Query: 174 LMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLE 233
LMQHIPLWVLKWQGLQ +V+FVTVITDLNTCHPTWFH VNRCYCPS+EVAKRA+ L+
Sbjct: 61 LMQHIPLWVLKWQGLQNRVVFVTVITDLNTCHPTWFHADVNRCYCPSEEVAKRAALDDLQ 120
Query: 234 VSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGES 293
SQIRVFGLPIRPSF RAV+ KD+LR EL++DP LPAVLLMGGGEGMGPVK+TA ALGES
Sbjct: 121 PSQIRVFGLPIRPSFCRAVLVKDDLRKELELDPELPAVLLMGGGEGMGPVKKTAKALGES 180
Query: 294 LLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAG 353
L D+E G+PIGQLI+ICGRN+TL+S+LQ+ EWKIP+KVRGFETQMEKWMGACDCIITKAG
Sbjct: 181 LFDEELGKPIGQLIVICGRNKTLSSSLQALEWKIPIKVRGFETQMEKWMGACDCIITKAG 240
Query: 354 PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDE 413
PGTIAEALIRGLPIILND+IPGQE GNVPYVVDNGAGVF++S +ETA++V WF +DE
Sbjct: 241 PGTIAEALIRGLPIILNDFIPGQEVGNVPYVVDNGAGVFSKSSRETAKLVARWFGPDSDE 300
Query: 414 LKRMSENALKLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTASF 458
LKRMSE ALKLAQPEAV DIV+DIH+L+ ++G ++++ LT+SF
Sbjct: 301 LKRMSEKALKLAQPEAVFDIVRDIHELSREQGVISQISSSLTSSF 345
|
|
| TAIR|locus:2124844 MGD1 "monogalactosyl diacylglycerol synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1332 (473.9 bits), Expect = 5.2e-136, P = 5.2e-136
Identities = 247/394 (62%), Positives = 309/394 (78%)
Query: 57 IGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMER 116
+ A+R K VLILMSDTGGGHRASAEAIR AF EFGDEY++F+ D+ ++ WP N + R
Sbjct: 136 VEADRPKKVLILMSDTGGGHRASAEAIRAAFNQEFGDEYQVFITDLWTDHTPWPFNQLPR 195
Query: 117 SYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQ 176
SY F+VKH LWK+ ++ TSP+ +H AA + + A+E+ GLM+Y+PDIIISVHPLMQ
Sbjct: 196 SYNFLVKHGTLWKMTYYGTSPRIVHQSNFAATSTFIAREIAQGLMKYQPDIIISVHPLMQ 255
Query: 177 HIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQ 236
H+PL VL+ +GL KK++F TVITDL+TCHPTWFH V RCYCPS EVAKRA GLE SQ
Sbjct: 256 HVPLRVLRSKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPSTEVAKRAQKAGLETSQ 315
Query: 237 IRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLD 296
I+V+GLP+RPSFV+ V K LR EL MD LPAVLLMGGGEGMGP++ TA AL ++L D
Sbjct: 316 IKVYGLPVRPSFVKPVRPKVELRRELGMDENLPAVLLMGGGEGMGPIEATARALADALYD 375
Query: 297 KETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGT 356
K G +GQ++IICGRN+ L S L S +WKIPV+V+GF T+ME+ MGACDCIITKAGPGT
Sbjct: 376 KNLGEAVGQVLIICGRNKKLQSKLSSLDWKIPVQVKGFITKMEECMGACDCIITKAGPGT 435
Query: 357 IAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKR 416
IAEA+IRGLPIILN YI GQE GNVPYVV+NG G F++SPKE ++IV +WF + EL+
Sbjct: 436 IAEAMIRGLPIILNGYIAGQEAGNVPYVVENGCGKFSKSPKEISKIVADWFGPASKELEI 495
Query: 417 MSENALKLAQPEAVVDIVKDIHDLAAQRGPLARV 450
MS+NAL+LA+PEAV IV D+H+L ++ L ++
Sbjct: 496 MSQNALRLAKPEAVFKIVHDMHELVRKKNSLPQL 529
|
|
| UNIPROTKB|P54166 ugtP "Processive diacylglycerol glucosyltransferase" [Bacillus subtilis subsp. subtilis str. 168 (taxid:224308)] | Back alignment and assigned GO terms |
|---|
Score = 301 (111.0 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 106/394 (26%), Positives = 187/394 (47%)
Query: 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMV 122
K VLIL ++ G GH A+ + + + G ++ + V ++ +E P+ Y ++
Sbjct: 5 KRVLILTANYGNGHVQVAKTLYEQC-VRLGFQH-VTVSNLYQESN--PIVSEVTQYLYL- 59
Query: 123 KHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAK--EVEAGLM--EYKPDIIISVHPLMQHI 178
K + K F+ + Y Y K G + E++PDIII+ P++ +
Sbjct: 60 KSFSIGK-QFYRLFYYGVDKIYNKRKFNIYFKMGNKRLGELVDEHQPDIIINTFPMIV-V 117
Query: 179 PLWVLKWQGLQKKVI-FVTVITDLNTC-HPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQ 236
P +++ +VI V+TD C H W H V++ Y + V ++ G S
Sbjct: 118 P----EYRRRTGRVIPTFNVMTDF--CLHKIWVHENVDKYYVATDYVKEKLLEIGTHPSN 171
Query: 237 IRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLD 296
+++ G+PIRP F ++ + + + P +L+M G G V + L E+L+
Sbjct: 172 VKITGIPIRPQFEESM-PVGPIYKKYNLSPNKKVLLIMAGAHG---VLKNVKELCENLVK 227
Query: 297 KETGRPIGQLIIICGRNRTLASTLQSEEWKI--PVKVRGFETQMEKWMGACDCIITKAGP 354
+ Q++++CG+N L +L + E + +KV G+ ++++ DC+ITK G
Sbjct: 228 DDQV----QVVVVCGKNTALKESLSALEAENGDKLKVLGYVERIDELFRITDCMITKPGG 283
Query: 355 GTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDEL 414
T+ EA G+P+IL +PGQEK N + D GA + +E VT + + D L
Sbjct: 284 ITLTEATAIGVPVILYKPVPGQEKENANFFEDRGAAIVVNRHEEILESVTSLLADE-DTL 342
Query: 415 KRMSENA--LKLAQPEAVV--DIVKDIHDLAAQR 444
RM +N L LA V+ DI+K+ + A++
Sbjct: 343 HRMKKNIKDLHLANSSEVILEDILKESEMMTAKQ 376
|
|
| UNIPROTKB|Q81YW9 ugtP "Processive diacylglycerol glucosyltransferase" [Bacillus anthracis (taxid:1392)] | Back alignment and assigned GO terms |
|---|
Score = 280 (103.6 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 108/389 (27%), Positives = 179/389 (46%)
Query: 61 RTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWP-LNDMERSYK 119
+ VLIL + G GH A+ + F+ + G + + V D+ E P + D+ + Y
Sbjct: 3 KNPKVLILTAHYGNGHVQVAKTLEQTFR-QKGIK-DVIVCDLFGE--SHPVITDITK-YL 57
Query: 120 FMVKHV---QLWKVAFHSTSPKWIHSCYLAAMAAYYA----KEVEAGLMEYKPDIIISVH 172
++ + +L+++ ++ + Y +A++YA K ++ L KPDI+I+
Sbjct: 58 YLKSYTIGKELYRLFYYG-----VEKIYDKKIASWYANFGRKRLKLLLQAEKPDIVINTF 112
Query: 173 PLMQHIPLWVLKWQGLQKKVIFVTVITDLNTC-HPTWFHPRVNRCYCPSKEVAKRASYFG 231
P++ +P + K G+ V V+TD C H W H V+R + + V K G
Sbjct: 113 PIIA-VPE-LKKQTGISIPVY--NVLTDF--CVHKIWIHREVDRYFVATDHVKKVMVDIG 166
Query: 232 LEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEG-MGPVKETAMAL 290
+ QI G+PIR SF I+ D + + Q+ +L++ G G +G VKE L
Sbjct: 167 VPAEQIVETGIPIRSSF-ELKINPDIIYNKYQLCKNKKILLIVAGAHGVLGSVKE----L 221
Query: 291 GESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIP--VKVRGFETQMEKWMGACDCI 348
+S + P Q++++CG+N L L + P +KV G+ +++ C+
Sbjct: 222 CQSFMSV----PDLQVVVVCGKNEALKQDLVGVQETNPDALKVFGYVENIDELFRVTSCM 277
Query: 349 ITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFS 408
ITK G T++EA +P+IL +PGQE N Y GA V R E TE
Sbjct: 278 ITKPGGITLSEAAALQVPVILYKPVPGQENENAMYFERKGAAVVIRDDSEVFA-KTEALL 336
Query: 409 TKTDELKRMSENALKLAQPEAVVDIVKDI 437
+L +M E + +PE IV I
Sbjct: 337 QDDMKLLQMKEAMKSIYRPEPADHIVDTI 365
|
|
| TIGR_CMR|BA_0511 BA_0511 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 280 (103.6 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 108/389 (27%), Positives = 179/389 (46%)
Query: 61 RTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWP-LNDMERSYK 119
+ VLIL + G GH A+ + F+ + G + + V D+ E P + D+ + Y
Sbjct: 3 KNPKVLILTAHYGNGHVQVAKTLEQTFR-QKGIK-DVIVCDLFGE--SHPVITDITK-YL 57
Query: 120 FMVKHV---QLWKVAFHSTSPKWIHSCYLAAMAAYYA----KEVEAGLMEYKPDIIISVH 172
++ + +L+++ ++ + Y +A++YA K ++ L KPDI+I+
Sbjct: 58 YLKSYTIGKELYRLFYYG-----VEKIYDKKIASWYANFGRKRLKLLLQAEKPDIVINTF 112
Query: 173 PLMQHIPLWVLKWQGLQKKVIFVTVITDLNTC-HPTWFHPRVNRCYCPSKEVAKRASYFG 231
P++ +P + K G+ V V+TD C H W H V+R + + V K G
Sbjct: 113 PIIA-VPE-LKKQTGISIPVY--NVLTDF--CVHKIWIHREVDRYFVATDHVKKVMVDIG 166
Query: 232 LEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEG-MGPVKETAMAL 290
+ QI G+PIR SF I+ D + + Q+ +L++ G G +G VKE L
Sbjct: 167 VPAEQIVETGIPIRSSF-ELKINPDIIYNKYQLCKNKKILLIVAGAHGVLGSVKE----L 221
Query: 291 GESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIP--VKVRGFETQMEKWMGACDCI 348
+S + P Q++++CG+N L L + P +KV G+ +++ C+
Sbjct: 222 CQSFMSV----PDLQVVVVCGKNEALKQDLVGVQETNPDALKVFGYVENIDELFRVTSCM 277
Query: 349 ITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFS 408
ITK G T++EA +P+IL +PGQE N Y GA V R E TE
Sbjct: 278 ITKPGGITLSEAAALQVPVILYKPVPGQENENAMYFERKGAAVVIRDDSEVFA-KTEALL 336
Query: 409 TKTDELKRMSENALKLAQPEAVVDIVKDI 437
+L +M E + +PE IV I
Sbjct: 337 QDDMKLLQMKEAMKSIYRPEPADHIVDTI 365
|
|
| TIGR_CMR|CHY_1043 CHY_1043 "putative glycosyl transferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 254 (94.5 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 73/244 (29%), Positives = 123/244 (50%)
Query: 194 FVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVI 253
+ TVITD + H W Y ++E+ ++ G +I FG PI P F I
Sbjct: 124 YATVITDYDY-HAFWLTQNSRFYYVAAEEIKEKLVGKGYSRDKIYAFGPPIDPVFA-GEI 181
Query: 254 SKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRN 313
+ +R Q+ +L+MGGG G+GP+ E A L + ++KE +I++CG N
Sbjct: 182 DANAVRERYQIREGTKIILMMGGGLGLGPLAEAAKTLTD--INKEW-----VVIVLCGHN 234
Query: 314 RTLASTLQ--SEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILND 371
+ L L+ IPV F ++ +++ A D +ITK G + AEAL G P+I+ +
Sbjct: 235 QKLYRDLKVLGRRNLIPVP---FTAEVPEYLAAADIVITKPGGLSTAEALALGKPLIIIN 291
Query: 372 YIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVV 431
+PGQE+ N ++ GA ++ E +++ E F ++ L + + A KL + +A +
Sbjct: 292 PLPGQEQRNAEFLQKKGAALYLSDVLELNKVLPELFFSQN--LLSLRQKAAKLGRRDASI 349
Query: 432 DIVK 435
+I K
Sbjct: 350 NISK 353
|
|
| TIGR_CMR|CBU_0135 CBU_0135 "UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 53/213 (24%), Positives = 91/213 (42%)
Query: 241 GLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETG 300
G P+R V+ + + +RL + P+ +L++GG +G A ++ + +L +
Sbjct: 157 GNPVRTELVKMPLPQ--VRLAARRGPL--RILVLGGSQG-------ARSINQKMLAALSS 205
Query: 301 RPIGQLIII---CGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTI 357
P + I + G+ + E+ KI KV F + M G D ++ +AG T+
Sbjct: 206 YPRSEEIAVWHQTGQRDFEFIQKEYEKIKIEAKVDNFISDMAGAYGWADLVVCRAGALTV 265
Query: 358 AEALIRGLPIILNDY---IPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWF---STKT 411
E G+ I Y + + N ++ GA + T + WF +
Sbjct: 266 CEIASVGVASIFIPYPHAVDNHQFHNARFLEQAGAAIIISEESLTETDLMRWFEQFAQDR 325
Query: 412 DELKRMSENALKLAQPEAVVDIVKDIHDLAAQR 444
D L M+ENA KLA+PEAV ++ A R
Sbjct: 326 DRLLTMAENARKLAKPEAVQRVIAQCKKFYAAR 358
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 462 447 0.00091 118 3 11 22 0.37 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 623 (66 KB)
Total size of DFA: 279 KB (2145 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.38u 0.12s 33.50t Elapsed: 00:00:01
Total cpu time: 33.38u 0.12s 33.50t Elapsed: 00:00:01
Start: Fri May 10 16:36:49 2013 End: Fri May 10 16:36:50 2013
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q6UTZ2 | MGDG2_ORYSJ | 2, ., 4, ., 1, ., 4, 6 | 0.7481 | 0.8679 | 0.8550 | yes | no |
| Q9SI93 | MGDG3_ARATH | 2, ., 4, ., 1, ., 4, 6 | 0.7243 | 0.9826 | 0.9763 | no | no |
| A2YTP9 | MGDG2_ORYSI | 2, ., 4, ., 1, ., 4, 6 | 0.75 | 0.8658 | 0.8528 | N/A | no |
| Q0DWQ1 | MGDG3_ORYSJ | 2, ., 4, ., 1, ., 4, 6 | 0.7810 | 0.8874 | 0.8070 | yes | no |
| O82730 | MGDG2_ARATH | 2, ., 4, ., 1, ., 4, 6 | 0.7780 | 0.9740 | 0.9615 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 462 | |||
| PLN02605 | 382 | PLN02605, PLN02605, monogalactosyldiacylglycerol s | 0.0 | |
| pfam06925 | 169 | pfam06925, MGDG_synth, Monogalactosyldiacylglycero | 1e-76 | |
| PRK13609 | 380 | PRK13609, PRK13609, diacylglycerol glucosyltransfe | 7e-43 | |
| PRK13608 | 391 | PRK13608, PRK13608, diacylglycerol glucosyltransfe | 4e-34 | |
| COG0707 | 357 | COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acety | 2e-24 | |
| cd03785 | 350 | cd03785, GT1_MurG, MurG is an N-acetylglucosaminyl | 5e-18 | |
| PRK00726 | 357 | PRK00726, murG, undecaprenyldiphospho-muramoylpent | 4e-15 | |
| TIGR01133 | 348 | TIGR01133, murG, undecaprenyldiphospho-muramoylpen | 1e-12 | |
| pfam04101 | 167 | pfam04101, Glyco_tran_28_C, Glycosyltransferase fa | 2e-09 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 5e-04 | |
| pfam13528 | 317 | pfam13528, Glyco_trans_1_3, Glycosyl transferase f | 0.004 |
| >gnl|CDD|215325 PLN02605, PLN02605, monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Score = 743 bits (1921), Expect = 0.0
Identities = 275/382 (71%), Positives = 319/382 (83%), Gaps = 2/382 (0%)
Query: 65 VLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKH 124
VLILMSDTGGGHRASAEAI+DAF++EFGDEY++F+ D+ KE+ WP N + RSYKF+VKH
Sbjct: 1 VLILMSDTGGGHRASAEAIKDAFQLEFGDEYQVFIVDLWKEHTPWPFNQLPRSYKFLVKH 60
Query: 125 VQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLK 184
QLWK+ +H T+P+ IH Y AA +A+ A+EV GLM+YKPDII+SVHPLMQH+PL VL+
Sbjct: 61 PQLWKMTYHGTNPRLIHQSYFAATSAFVAREVAKGLMKYKPDIIVSVHPLMQHVPLRVLR 120
Query: 185 WQG--LQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGL 242
WQG L KK+ F TV+TDL TCHPTWFH V RC+CPS+EVAKRA GLE SQIRV+GL
Sbjct: 121 WQGKELGKKIPFTTVVTDLGTCHPTWFHKGVTRCFCPSEEVAKRALKRGLEPSQIRVYGL 180
Query: 243 PIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRP 302
PIRPSF RAV KD LR EL MD LPAVLLMGGGEGMGP++ETA ALG+SL DK G+P
Sbjct: 181 PIRPSFARAVRPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKP 240
Query: 303 IGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALI 362
IGQ+++ICGRN+ L S L+S +WKIPVKVRGF T ME+WMGACDCIITKAGPGTIAEALI
Sbjct: 241 IGQVVVICGRNKKLQSKLESRDWKIPVKVRGFVTNMEEWMGACDCIITKAGPGTIAEALI 300
Query: 363 RGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENAL 422
RGLPIILN YIPGQE+GNVPYVVDNG G F+ SPKE ARIV EWF K+DEL+ MSENAL
Sbjct: 301 RGLPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENAL 360
Query: 423 KLAQPEAVVDIVKDIHDLAAQR 444
KLA+PEAV DIV D+H+L QR
Sbjct: 361 KLARPEAVFDIVHDLHELVRQR 382
|
Length = 382 |
| >gnl|CDD|219230 pfam06925, MGDG_synth, Monogalactosyldiacylglycerol (MGDG) synthase | Back alignment and domain information |
|---|
Score = 236 bits (604), Expect = 1e-76
Identities = 83/169 (49%), Positives = 116/169 (68%)
Query: 76 HRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHST 135
H +AEA+R+AF EFGDEY++ V D KE + L + RSY F+VKH +L+++ ++ T
Sbjct: 1 HNQAAEALREAFNNEFGDEYQVVVHDSLKELNPFLLKFVLRSYLFLVKHSRLYRLLYYGT 60
Query: 136 SPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFV 195
PK H LA +A ++A+E+ A L E++PDIIIS HPL +PL VLK +GL K+V+ V
Sbjct: 61 EPKIPHKSILAKLATFFARELAALLKEFQPDIIISTHPLPAAVPLSVLKSKGLLKRVLVV 120
Query: 196 TVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPI 244
TV+TD TCHP W HP ++R Y PSKEV K A G++ S I+V G+P+
Sbjct: 121 TVVTDFRTCHPFWLHPEIDRYYVPSKEVKKEALEKGIDPSNIKVTGIPV 169
|
This family represents a conserved region of approximately 180 residues within plant and bacterial monogalactosyldiacylglycerol (MGDG) synthase (EC:2.4.1.46). In Arabidopsis, there are two types of MGDG synthase which differ in their N-terminal portion: type A and type B. Length = 169 |
| >gnl|CDD|237445 PRK13609, PRK13609, diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 7e-43
Identities = 109/398 (27%), Positives = 178/398 (44%), Gaps = 32/398 (8%)
Query: 61 RTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKF 120
+ VLIL + G GH A+ + F+ + G + + V D+ E + ++ +
Sbjct: 3 KNPKVLILTAHYGNGHVQVAKTLEQTFR-QKGIK-DVIVCDLFGESHPV-ITEITKYLYL 59
Query: 121 MVKHV--QLWKVAFHSTSPKWIHSCYLAAMAAYYA----KEVEAGLMEYKPDIIISVHPL 174
+ +L+++ ++ Y + ++YA K ++ L KPDI+I+ P+
Sbjct: 60 KSYTIGKELYRLFYYGVEK-----IYDKKIFSWYANFGRKRLKLLLQAEKPDIVINTFPI 114
Query: 175 MQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEV 234
I + LK Q + V+TD H W H V+R + + V K G+
Sbjct: 115 ---IAVPELKKQ-TGISIPTYNVLTDF-CLHKIWVHREVDRYFVATDHVKKVLVDIGVPP 169
Query: 235 SQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEG-MGPVKETAMALGES 293
Q+ G+PIR SF I+ D + + Q+ P +L+M G G +G VKE L +S
Sbjct: 170 EQVVETGIPIRSSF-ELKINPDIIYNKYQLCPNKKILLIMAGAHGVLGNVKE----LCQS 224
Query: 294 LLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIP--VKVRGFETQMEKWMGACDCIITK 351
L+ P Q++++CG+N L +L+ + P +KV G+ +++ C+ITK
Sbjct: 225 LMSV----PDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENIDELFRVTSCMITK 280
Query: 352 AGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKT 411
G T++EA G+P+IL +PGQEK N Y GA V R +E
Sbjct: 281 PGGITLSEAAALGVPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDD- 339
Query: 412 DELKRMSENALKLAQPEAVVDIVKDIHDLAAQRGPLAR 449
+L +M E L PE IV DI LA+
Sbjct: 340 MKLLQMKEAMKSLYLPEPADHIVDDILAENHVEPNLAQ 377
|
Length = 380 |
| >gnl|CDD|184179 PRK13608, PRK13608, diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 131 bits (331), Expect = 4e-34
Identities = 100/399 (25%), Positives = 170/399 (42%), Gaps = 53/399 (13%)
Query: 61 RTKNVLILMSDTGGGHRASAEAIRDAFK---------IE---FGDEYRIFVKDVCKEYAG 108
+ K +LI+ G GH ++I + IE F + + I + +CK+
Sbjct: 4 QNKKILIITGSFGNGHMQVTQSIVNQLNDMNLDHLSVIEHDLFMEAHPI-LTSICKK--- 59
Query: 109 WPLNDMERSYKF---MVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYA-KEVEAGLMEYK 164
W +N S+K+ M K F+ + P + C+ YY ++ L++ K
Sbjct: 60 WYIN----SFKYFRNMYK-------GFYYSRPDKLDKCFYK----YYGLNKLINLLIKEK 104
Query: 165 PDIIISVHP--LMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKE 222
PD+I+ P +M VL Q + TV+TD H W P R Y +KE
Sbjct: 105 PDLILLTFPTPVMS-----VLTEQ-FNINIPVATVMTDY-RLHKNWITPYSTRYYVATKE 157
Query: 223 VAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGP 282
+ G++ S ++V G+PI F I + ++ +DP +L+ G G+
Sbjct: 158 TKQDFIDVGIDPSTVKVTGIPIDNKF-ETPIDQKQWLIDNNLDPDKQTILMSAGAFGV-- 214
Query: 283 VKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIP-VKVRGFETQMEKW 341
+ + D Q+++ICG+++ L +L ++ V + G+ M +W
Sbjct: 215 ----SKGFDTMITDILAKSANAQVVMICGKSKELKRSLTAKFKSNENVLILGYTKHMNEW 270
Query: 342 MGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETAR 401
M + +ITK G TI+E L R +P+I + PGQE N Y + G G +P+E +
Sbjct: 271 MASSQLMITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIADTPEEAIK 330
Query: 402 IVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDL 440
IV + +L M + A I +D+ DL
Sbjct: 331 IVASLTNGNE-QLTNMISTMEQDKIKYATQTICRDLLDL 368
|
Length = 391 |
| >gnl|CDD|223779 COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 2e-24
Identities = 79/391 (20%), Positives = 147/391 (37%), Gaps = 58/391 (14%)
Query: 66 LILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHV 125
++L + GGH A A+ + ++ + + +E F+VK
Sbjct: 3 IVLTAGGTGGHVFPALALAEELAKRGWEQVIVLGTG----------DGLEA---FLVKQY 49
Query: 126 QLWKVAFHSTSPKW--IHSCYLAAM----AAYYAKEVEAGLMEYKPDIIISVHPLMQHIP 179
+ S + A A+++ L + KPD++I + P
Sbjct: 50 GIEFELIPSGGLRRKGSLKLLKAPFKLLKGVLQARKI---LKKLKPDVVIGTGGYVS-GP 105
Query: 180 LWVLKWQGLQKKVIFVTVITDLNTCHPTW--FHPRVNRCYCPSKEVAKRASYFGLEVSQI 237
+ + + + + + ++ G++ +
Sbjct: 106 VGIAAKL---LGIPVIIHEQNA-VPGLANKILSKFAKKVASAFPKLEA-----GVKPENV 156
Query: 238 RVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDK 297
V G+P+RP F ++ +R + ++D +L+ GG +G + + L ++
Sbjct: 157 VVTGIPVRPEFEELPAAE--VRKDGRLDKKT--ILVTGGSQGAKALNDLVPEALAKLANR 212
Query: 298 ETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTI 357
Q+I G+N L + V+V F M + A D +I++AG TI
Sbjct: 213 I------QVIHQTGKN-DLEELKSAYNELGVVRVLPFIDDMAALLAAADLVISRAGALTI 265
Query: 358 AEALIRGLPIILNDYIPG----QEKGNVPYVVDNGAGVFTRSPKET----ARIVTEWFST 409
AE L G+P IL Y PG QE N ++ GA + R + T A ++ S
Sbjct: 266 AELLALGVPAILVPYPPGADGHQEY-NAKFLEKAGAALVIRQSELTPEKLAELILRLLSN 324
Query: 410 KTDELKRMSENALKLAQPEA---VVDIVKDI 437
LK M+ENA KL +P+A + D++ +
Sbjct: 325 PEK-LKAMAENAKKLGKPDAAERIADLLLAL 354
|
Length = 357 |
| >gnl|CDD|99961 cd03785, GT1_MurG, MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Score = 84.8 bits (211), Expect = 5e-18
Identities = 60/213 (28%), Positives = 87/213 (40%), Gaps = 31/213 (14%)
Query: 237 IRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGE---S 293
V G P+R ++ D R L + P P +L+ GG +G A A+ E
Sbjct: 154 AVVTGNPVREEI----LALDRERARLGLRPGKPTLLVFGGSQG-------ARAINEAVPE 202
Query: 294 LLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAG 353
L + + + Q+I G+ EE + +V F M A D +I++AG
Sbjct: 203 ALAELLRKRL-QVIHQTGKGDLEEVKKAYEELGVNYEVFPFIDDMAAAYAAADLVISRAG 261
Query: 354 PGTIAEALIRGLPIILNDYIP-------GQEKGNVPYVVDNGAGVF----TRSPKETARI 402
T+AE GLP IL IP Q N +V GA V +P+ A
Sbjct: 262 ASTVAELAALGLPAIL---IPLPYAADDHQTA-NARALVKAGAAVLIPQEELTPERLAAA 317
Query: 403 VTEWFSTKTDELKRMSENALKLAQPEAVVDIVK 435
+ E S + LK M+E A LA+P+A I
Sbjct: 318 LLELLSDP-ERLKAMAEAARSLARPDAAERIAD 349
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 350 |
| >gnl|CDD|234825 PRK00726, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 75.9 bits (188), Expect = 4e-15
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 31/228 (13%)
Query: 228 SYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETA 287
++ + V G P+R +++ L P +L++GG +G + E
Sbjct: 147 AFPEFFKPKAVVTGNPVRE----EILALAAPPARLAGREGKPTLLVVGGSQGARVLNEAV 202
Query: 288 MALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDC 347
L + Q+I G+ L + I +V F M A D
Sbjct: 203 PEALALLPEAL------QVIHQTGKGD-LEEVRAAYAAGINAEVVPFIDDMAAAYAAADL 255
Query: 348 IITKAGPGTIAEALIRGLPIILNDYIP-------GQEKGNVPYVVDNGAGV------FTR 394
+I +AG T+AE GLP IL +P Q N +VD GA + T
Sbjct: 256 VICRAGASTVAELAAAGLPAIL---VPLPHAADDHQTA-NARALVDAGAALLIPQSDLT- 310
Query: 395 SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAA 442
P++ A + E S + L+ M+E A L +P+A + I +LA
Sbjct: 311 -PEKLAEKLLELLSDP-ERLEAMAEAARALGKPDAAERLADLIEELAR 356
|
Length = 357 |
| >gnl|CDD|233284 TIGR01133, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 1e-12
Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 26/208 (12%)
Query: 241 GLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETG 300
G P+R + + S R + P +L++GG +G + E L K
Sbjct: 156 GNPVR----QEIRSLPVPRERFGLREGKPTILVLGGSQGAKILNELV----PKALAKLAE 207
Query: 301 RPIGQLIIICGRNR--TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIA 358
+ I Q++ G+N + + Q I V + M A D +I++AG T+A
Sbjct: 208 KGI-QIVHQTGKNDLEKVKNVYQELG--IEAIVTFIDENMAAAYAAADLVISRAGASTVA 264
Query: 359 EALIRGLPIILNDYIP-----GQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFST 409
E G+P IL IP + N ++ D GAG+ R P++ + +
Sbjct: 265 ELAAAGVPAIL---IPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLK-LLL 320
Query: 410 KTDELKRMSENALKLAQPEAVVDIVKDI 437
L+ M+E A KLA+P+A I + I
Sbjct: 321 DPANLEAMAEAARKLAKPDAAKRIAELI 348
|
RM 8449890 RT The final step of peptidoglycan subunit assembly in Escherichia coli occurs in the cytoplasm. RA Bupp K, van Heijenoort J. RL J Bacteriol 1993 Mar;175(6):1841-3 [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. Length = 348 |
| >gnl|CDD|217893 pfam04101, Glyco_tran_28_C, Glycosyltransferase family 28 C-terminal domain | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 2e-09
Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 14/152 (9%)
Query: 292 ESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITK 351
E E Q++ G++ + ++ I V+V F M +++ A D +I++
Sbjct: 20 EVDPLLELKGIEYQVLHQTGKSDYEPVNCKYSKFGINVEVFPFIDNMAEYIKAADLVISR 79
Query: 352 AGPGTIAEALIRGLPIILNDYIPGQEKG------NVPYVVDNGAG----VFTRSPKETAR 401
AG GTIAE L G P IL +P + N +V GA +P++
Sbjct: 80 AGAGTIAELLALGKPAIL---VPRPKAAGEHQDNNALELVKAGAALVLLQKELTPEKLVE 136
Query: 402 IVTEWFSTKTDELKRMSENALKLAQPEAVVDI 433
+ + K L M++ A +A+ +
Sbjct: 137 ALLKLLL-KPLRLYEMNKAAKGSRLKDAIKRL 167
|
The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site. Length = 167 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 5e-04
Identities = 22/117 (18%), Positives = 35/117 (29%), Gaps = 22/117 (18%)
Query: 320 LQSEEWKIPVKVR--GFETQMEKW--MGACDCIITKAGPG-------TIAEALIRGLPII 368
+ + +V G +K + D + P +AEAL G P++
Sbjct: 253 QIAAALGLEDRVTFTGMLYGEDKAAALADADLFVL---PSHSENFGIVVAEALACGTPVV 309
Query: 369 LNDYIPGQEKGNVPYVVDNGAGVFTR-SPKETARIVTEWFSTKTDELKRMSENALKL 424
D K +++ G G A + LK M EN L
Sbjct: 310 TTD------KVPWQELIEYGCGWVVDDDVDALAAALRRALE-LPQRLKAMGENGRAL 359
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|222200 pfam13528, Glyco_trans_1_3, Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.004
Identities = 70/374 (18%), Positives = 117/374 (31%), Gaps = 90/374 (24%)
Query: 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMV 122
+L + TG GH + A + +A + G E + +E E Y+
Sbjct: 1 MKILYGVQGTGNGHISRARVLAEALR---GHEVDVLFSGRAEELL-----SPEFPYR--- 49
Query: 123 KHVQLWKVAFHST-----SPKWIH--SCYLAAMAAYYAKEVEAGLMEYKPDIIIS-VHPL 174
+L + F + K I L + V+ L ++PD++I+ P
Sbjct: 50 ---RLPGLTFVTENGRVDYGKTILKNLQGLIRLPRLVRDLVKL-LDLFRPDLVITDFEP- 104
Query: 175 MQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEV 234
I W K QG+ V + C + K + F E
Sbjct: 105 ---ISAWAAKRQGVP----CVGIDHQYA----------FLACNYDIPKGLKFDALF--EK 145
Query: 235 SQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILP----------------AVLLMGGGE 278
+R F P+ R + PI+P +L+ E
Sbjct: 146 YVLRAFA----PAQRRLGLHFYPPLKPHFEQPIVPPILRPELLEARPEEGGKILVYLPFE 201
Query: 279 GMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGF-ETQ 337
+ V E D E I+ G N+ E + R F E
Sbjct: 202 DLEDVAELLKPFP----DYEF--------IVYGPNKEE----GREGN---LTFRPFSEEG 242
Query: 338 MEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIP--GQ--EKGNVPYVVDNGAGVFT 393
+ + C +I AG ++EAL G P++L +P GQ + N Y+ G G+
Sbjct: 243 FLRDLAECSAVICNAGFELLSEALYLGKPLLL---VPLDGQFEQTSNALYLERLGYGIVM 299
Query: 394 RSPKETARIVTEWF 407
++ +
Sbjct: 300 DMEDLDPAVLRRFL 313
|
Length = 317 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 462 | |||
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 100.0 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 100.0 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 100.0 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 100.0 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 100.0 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 100.0 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 100.0 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.97 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.96 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.96 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.96 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.95 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.95 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.94 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.94 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.94 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.93 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.93 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.93 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.93 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.93 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.92 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.92 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.92 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.92 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.92 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.92 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.92 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.92 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.92 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.92 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.92 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.92 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.92 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.91 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.91 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.91 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.91 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.91 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.91 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.91 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.91 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.9 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.9 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.9 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.9 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.9 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.9 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.9 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.9 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.89 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.89 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 99.89 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.89 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.89 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.89 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.89 | |
| PLN02316 | 1036 | synthase/transferase | 99.88 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.88 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.88 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.88 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.88 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 99.87 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.87 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.87 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.86 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.86 | |
| PLN00142 | 815 | sucrose synthase | 99.86 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.86 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.86 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.86 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.86 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.86 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 99.85 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.84 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.84 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 99.82 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.82 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 99.81 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 99.8 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 99.79 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.78 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 99.78 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.78 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.78 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 99.77 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.76 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.75 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 99.74 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 99.73 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 99.69 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 99.68 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 99.67 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 99.66 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 99.65 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.65 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 99.65 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.62 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 99.62 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.61 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.59 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.58 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.54 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.54 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.54 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.45 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 99.43 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 99.42 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 99.41 | |
| PLN02208 | 442 | glycosyltransferase family protein | 99.41 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 99.37 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.36 | |
| PLN00414 | 446 | glycosyltransferase family protein | 99.36 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 99.35 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 99.35 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 99.34 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 99.33 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 99.28 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.23 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.2 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 99.19 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.15 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.13 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 99.09 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.08 | |
| PLN02764 | 453 | glycosyltransferase family protein | 99.01 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.0 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 98.99 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 98.97 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 98.95 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 98.95 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 98.92 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 98.92 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 98.92 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 98.91 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 98.89 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 98.88 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 98.84 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 98.8 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.75 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 98.73 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 98.72 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 98.71 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 98.7 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.67 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 98.65 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 98.63 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 98.62 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 98.4 | |
| KOG1192 | 496 | consensus UDP-glucuronosyl and UDP-glucosyl transf | 98.38 | |
| KOG3349 | 170 | consensus Predicted glycosyltransferase [General f | 98.31 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 98.23 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 98.18 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 98.1 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 98.1 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 98.02 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 97.95 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 97.82 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 97.75 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 97.74 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 97.59 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 97.52 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 97.52 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 97.45 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 97.42 | |
| COG5017 | 161 | Uncharacterized conserved protein [Function unknow | 97.38 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 97.35 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 97.16 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 97.1 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 97.09 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 97.06 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 97.0 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.92 | |
| COG1887 | 388 | TagB Putative glycosyl/glycerophosphate transferas | 96.62 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 96.37 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 96.32 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 95.57 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 95.31 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 95.27 | |
| PF04230 | 286 | PS_pyruv_trans: Polysaccharide pyruvyl transferase | 95.1 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 94.75 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 94.74 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 94.35 | |
| COG2099 | 257 | CobK Precorrin-6x reductase [Coenzyme metabolism] | 94.0 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 93.39 | |
| TIGR00730 | 178 | conserved hypothetical protein, DprA/Smf-related, | 90.41 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 89.05 | |
| COG0796 | 269 | MurI Glutamate racemase [Cell envelope biogenesis, | 86.45 | |
| PRK13195 | 222 | pyrrolidone-carboxylate peptidase; Provisional | 86.41 | |
| PF00551 | 181 | Formyl_trans_N: Formyl transferase; InterPro: IPR0 | 85.24 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 84.95 | |
| PRK13196 | 211 | pyrrolidone-carboxylate peptidase; Provisional | 84.48 | |
| PF11071 | 141 | DUF2872: Protein of unknown function (DUF2872); In | 82.16 | |
| TIGR00725 | 159 | conserved hypothetical protein, DprA/Smf-related, | 82.01 | |
| PRK05647 | 200 | purN phosphoribosylglycinamide formyltransferase; | 80.77 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 80.59 |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-49 Score=397.33 Aligned_cols=378 Identities=72% Similarity=1.229 Sum_probs=312.0
Q ss_pred EEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhHHH
Q 012492 65 VLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCY 144 (462)
Q Consensus 65 Ili~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~ 144 (462)
|||++.++|+||.++|.+|+++|.+..++.+++.+.|+++...++....+.+.|..+++++.+|+..|+.++.+......
T Consensus 1 ilils~~~G~GH~~aa~al~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~Y~~~~~~p~~~~~~y~~~~~~~~~~~~ 80 (382)
T PLN02605 1 VLILMSDTGGGHRASAEAIKDAFQLEFGDEYQVFIVDLWKEHTPWPFNQLPRSYKFLVKHPQLWKMTYHGTNPRLIHQSY 80 (382)
T ss_pred CEEEEEcCCcChHHHHHHHHHHHHhhcCCCeeEEEEehhhhcCcchhhhHHHHHHHHhhCHHHHHHHHHhcCchhhhHHH
Confidence 68999999999999999999999876444568888999987677655667778998888866899888766543333333
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcC--CCCCCeEEEEecCCCCCCcccccCCCcEEEEcCHH
Q 012492 145 LAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQG--LQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKE 222 (462)
Q Consensus 145 ~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~--~~~~iP~v~~~~d~~~~~~~~~~~~~d~~i~~s~~ 222 (462)
....+....+++.+++++++||+||++||+.+..++.+++..+ ...++|+++++||+...|..|+++.+|.++++|+.
T Consensus 81 ~~~~~~~~~~~l~~~i~~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~~~w~~~~~d~~~~~s~~ 160 (382)
T PLN02605 81 FAATSAFVAREVAKGLMKYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCHPTWFHKGVTRCFCPSEE 160 (382)
T ss_pred HHHHHHHHHHHHHHHHHhcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcCcccccCCCCEEEECCHH
Confidence 3333455668899999999999999999987664443333211 12489999999999657899999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCC
Q 012492 223 VAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRP 302 (462)
Q Consensus 223 ~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~ 302 (462)
.++.+.+.|++++++.++|+|+++.|......++.+|+++|++++.++++++||+.|.+...+++.++.+.+.......+
T Consensus 161 ~~~~l~~~g~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~ 240 (382)
T PLN02605 161 VAKRALKRGLEPSQIRVYGLPIRPSFARAVRPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKP 240 (382)
T ss_pred HHHHHHHcCCCHHHEEEECcccCHhhccCCCCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCC
Confidence 99999999999999999999999887654346778899999998899999999999988888888776543311000124
Q ss_pred CceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchH
Q 012492 303 IGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVP 382 (462)
Q Consensus 303 ~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~ 382 (462)
+.+++++||++..+++.+++.....+|++.||+++|.++|++||++|+++||+|++|||++|+|+|+++..++|+.+|+.
T Consensus 241 ~~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G~~~~~~~l~~aaDv~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~ 320 (382)
T PLN02605 241 IGQVVVICGRNKKLQSKLESRDWKIPVKVRGFVTNMEEWMGACDCIITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVP 320 (382)
T ss_pred CceEEEEECCCHHHHHHHHhhcccCCeEEEeccccHHHHHHhCCEEEECCCcchHHHHHHcCCCEEEecCCCccchhhHH
Confidence 56778889988766666765544567999999999999999999999999999999999999999999988889889999
Q ss_pred HHHHCCceeeeCCHHHHHHHHHHHhcCC-HHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 383 YVVDNGAGVFTRSPKETARIVTEWFSTK-TDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 383 ~l~~~G~g~~~~~~~~la~~i~~ll~~d-~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
++.+.|.++.+.+++++++++.+++ .| ++.+++|++++++.+.++++++|++.+.+++.+
T Consensus 321 ~i~~~g~g~~~~~~~~la~~i~~ll-~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~~~ 381 (382)
T PLN02605 321 YVVDNGFGAFSESPKEIARIVAEWF-GDKSDELEAMSENALKLARPEAVFDIVHDLHELVRQ 381 (382)
T ss_pred HHHhCCceeecCCHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHhhC
Confidence 9999999998899999999999999 56 999999999999999999999999999988765
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-46 Score=378.93 Aligned_cols=366 Identities=25% Similarity=0.388 Sum_probs=297.0
Q ss_pred CCCCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhh-HHHHHHhhcCCcc
Q 012492 60 ERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHV-QLWKVAFHSTSPK 138 (462)
Q Consensus 60 ~~~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~-~l~~~~~~~~~~~ 138 (462)
++||||||++.++|+||.++|.+|+++|++++++..++.+.|++....++....+.+.|..++++. .+|+..|+.+. .
T Consensus 3 ~~~~~vlil~~~~G~GH~~aA~al~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~Y~~~~~~~p~~y~~~y~~~~-~ 81 (391)
T PRK13608 3 TQNKKILIITGSFGNGHMQVTQSIVNQLNDMNLDHLSVIEHDLFMEAHPILTSICKKWYINSFKYFRNMYKGFYYSRP-D 81 (391)
T ss_pred CCCceEEEEECCCCchHHHHHHHHHHHHHhhCCCCceEEEeehHHhcCchHHHHHHHHHHHHHHHhHHHHHHHHHcCc-h
Confidence 467899999999999999999999999998876556788889987766654444566788888665 46876666543 2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccccCCCcEEEE
Q 012492 139 WIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYC 218 (462)
Q Consensus 139 ~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~~~~d~~i~ 218 (462)
+....+ ......+++.+++++++||+||+++|.... ..++..+ ..++|++++++|+. .|..|+++.+|.+++
T Consensus 82 ~~~~~~---~~~~~~~~l~~~l~~~kPDvVi~~~p~~~~---~~l~~~~-~~~iP~~~v~td~~-~~~~w~~~~~d~~~v 153 (391)
T PRK13608 82 KLDKCF---YKYYGLNKLINLLIKEKPDLILLTFPTPVM---SVLTEQF-NINIPVATVMTDYR-LHKNWITPYSTRYYV 153 (391)
T ss_pred hhHHHH---HHHHHHHHHHHHHHHhCcCEEEECCcHHHH---HHHHHhc-CCCCCEEEEeCCCC-cccccccCCCCEEEE
Confidence 222221 122334688899999999999999887532 2233222 14899999999985 788999999999999
Q ss_pred cCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCC-ccHHHHHHHHHHhhhcc
Q 012492 219 PSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGM-GPVKETAMALGESLLDK 297 (462)
Q Consensus 219 ~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~-~~~~~~l~~l~~~l~~~ 297 (462)
.++.+++.+.+.|+++++|.++|+|+++.|... .+++..+++++++++++++++++|++|. +++..++.++.+.
T Consensus 154 ~s~~~~~~l~~~gi~~~ki~v~GiPv~~~f~~~-~~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~---- 228 (391)
T PRK13608 154 ATKETKQDFIDVGIDPSTVKVTGIPIDNKFETP-IDQKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAK---- 228 (391)
T ss_pred CCHHHHHHHHHcCCCHHHEEEECeecChHhccc-ccHHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhc----
Confidence 999999999989999999999999999877653 3456778889998888889999999985 6666666654321
Q ss_pred cCCCCCceEEEEccCCHHHHHHHhh-ccCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCCCc
Q 012492 298 ETGRPIGQLIIICGRNRTLASTLQS-EEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQ 376 (462)
Q Consensus 298 ~~~~~~~~~lvv~G~~~~l~~~~~~-~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~ 376 (462)
.+++++++++|.+.++.+.+++ .+...+|.+.||+++|.++|+.||++|+++||.|++|||++|+|+|+++..++|
T Consensus 229 ---~~~~~~vvv~G~~~~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~~aDl~I~k~gg~tl~EA~a~G~PvI~~~~~pgq 305 (391)
T PRK13608 229 ---SANAQVVMICGKSKELKRSLTAKFKSNENVLILGYTKHMNEWMASSQLMITKPGGITISEGLARCIPMIFLNPAPGQ 305 (391)
T ss_pred ---CCCceEEEEcCCCHHHHHHHHHHhccCCCeEEEeccchHHHHHHhhhEEEeCCchHHHHHHHHhCCCEEECCCCCCc
Confidence 2567888889988655444443 344568999999999999999999999999999999999999999999766777
Q ss_pred cccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 377 EKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 377 ~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
+..|+.++.+.|+|+.+.+++++++++.+++ +|++.+++|++++++.+.++++++|++.+.+++++
T Consensus 306 e~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll-~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~ 371 (391)
T PRK13608 306 ELENALYFEEKGFGKIADTPEEAIKIVASLT-NGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGH 371 (391)
T ss_pred chhHHHHHHhCCcEEEeCCHHHHHHHHHHHh-cCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhh
Confidence 8889999999999999999999999999999 79999999999999999999999999999888854
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-42 Score=346.22 Aligned_cols=368 Identities=27% Similarity=0.390 Sum_probs=280.6
Q ss_pred CCCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhh-hHHHHHHhhcCCcch
Q 012492 61 RTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKH-VQLWKVAFHSTSPKW 139 (462)
Q Consensus 61 ~~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~-~~l~~~~~~~~~~~~ 139 (462)
++|||+|++.++|+||..+|.+|+++|+++|+. ++.++|.++...++-.......|...++. ..+|...|..+....
T Consensus 3 ~~~rili~t~~~G~GH~~~a~al~~~l~~~g~~--~~~~~d~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 80 (380)
T PRK13609 3 KNPKVLILTAHYGNGHVQVAKTLEQTFRQKGIK--DVIVCDLFGESHPVITEITKYLYLKSYTIGKELYRLFYYGVEKIY 80 (380)
T ss_pred CCCeEEEEEcCCCchHHHHHHHHHHHHHhcCCC--cEEEEEhHHhcchHHHHHHHHHHHHHHHHhHHHHHHHHhccCccc
Confidence 467999999999999999999999999999863 56677876543332122223345554443 245665554332111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccccCCCcEEEEc
Q 012492 140 IHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCP 219 (462)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~~~~d~~i~~ 219 (462)
... ..........+++.+++++++||+||++++..+.. . +.+..+ .++|++++++|+. .|..|+++.+|.++++
T Consensus 81 ~~~-~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~-~-~~~~~~--~~ip~~~~~td~~-~~~~~~~~~ad~i~~~ 154 (380)
T PRK13609 81 DKK-IFSWYANFGRKRLKLLLQAEKPDIVINTFPIIAVP-E-LKKQTG--ISIPTYNVLTDFC-LHKIWVHREVDRYFVA 154 (380)
T ss_pred chH-HHHHHHHHHHHHHHHHHHHhCcCEEEEcChHHHHH-H-HHHhcC--CCCCeEEEeCCCC-CCcccccCCCCEEEEC
Confidence 011 11122233457889999999999999998876532 2 222222 4799999999985 6889999999999999
Q ss_pred CHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCC-ccHHHHHHHHHHhhhccc
Q 012492 220 SKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGM-GPVKETAMALGESLLDKE 298 (462)
Q Consensus 220 s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~-~~~~~~l~~l~~~l~~~~ 298 (462)
|+...+.+.+.|++++++.++|+|+++.|... .++..++++++++++++++++++|+.+. +.+.+++..+ .+
T Consensus 155 s~~~~~~l~~~gi~~~ki~v~G~p~~~~f~~~-~~~~~~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l----~~-- 227 (380)
T PRK13609 155 TDHVKKVLVDIGVPPEQVVETGIPIRSSFELK-INPDIIYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSL----MS-- 227 (380)
T ss_pred CHHHHHHHHHcCCChhHEEEECcccChHHcCc-CCHHHHHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHH----hh--
Confidence 99999999999999899999999998766543 3455678899998888888899998885 3454444433 22
Q ss_pred CCCCCceEEEEccCCHHHHHHHhhc--cCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCCCc
Q 012492 299 TGRPIGQLIIICGRNRTLASTLQSE--EWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQ 376 (462)
Q Consensus 299 ~~~~~~~~lvv~G~~~~l~~~~~~~--~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~ 376 (462)
.+++++++++|.+..+++.++++ ....+|++.||++++.++|+.||++|+++||.|++|||++|+|+|+++..+++
T Consensus 228 --~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD~~v~~~gg~t~~EA~a~g~PvI~~~~~~g~ 305 (380)
T PRK13609 228 --VPDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENIDELFRVTSCMITKPGGITLSEAAALGVPVILYKPVPGQ 305 (380)
T ss_pred --CCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechhhHHHHHHhccEEEeCCCchHHHHHHHhCCCEEECCCCCCc
Confidence 25678888888765444444332 22368999999999999999999999999999999999999999998765666
Q ss_pred cccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhccCC
Q 012492 377 EKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQRGP 446 (462)
Q Consensus 377 ~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~~~~ 446 (462)
+..|+.++.+.|.++...+++++++++.+++ +|++.+++|++++++++.+++++++++.+++++...-+
T Consensus 306 ~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll-~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~~~ 374 (380)
T PRK13609 306 EKENAMYFERKGAAVVIRDDEEVFAKTEALL-QDDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVEPN 374 (380)
T ss_pred chHHHHHHHhCCcEEEECCHHHHHHHHHHHH-CCHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhhhh
Confidence 6678889999999998899999999999999 79999999999999999999999999999998876544
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-37 Score=299.54 Aligned_cols=338 Identities=22% Similarity=0.297 Sum_probs=251.5
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEecccccc-------CCCchhhHHHHHHHHhhhHHHHHHhhcC
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYA-------GWPLNDMERSYKFMVKHVQLWKVAFHST 135 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~-------~~~~~~~~~~y~~~~~~~~l~~~~~~~~ 135 (462)
|+|++..+++| ||..+|++|+++|.++|.. ++.+........ +..+..++.. + +.+.
T Consensus 1 ~~ivl~~gGTG-GHv~pAlAl~~~l~~~g~~--~v~~~~~~~~~e~~l~~~~~~~~~~I~~~--------~-----~~~~ 64 (357)
T COG0707 1 KKIVLTAGGTG-GHVFPALALAEELAKRGWE--QVIVLGTGDGLEAFLVKQYGIEFELIPSG--------G-----LRRK 64 (357)
T ss_pred CeEEEEeCCCc-cchhHHHHHHHHHHhhCcc--EEEEecccccceeeeccccCceEEEEecc--------c-----cccc
Confidence 57888889996 9999999999999999853 334332111000 1111111100 0 0000
Q ss_pred -CcchhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC-CCcccccCCC
Q 012492 136 -SPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT-CHPTWFHPRV 213 (462)
Q Consensus 136 -~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~-~~~~~~~~~~ 213 (462)
....+... +.-+....+.++++++++||+|++++++.+.++..+++. .++|++.+.+|... ...+|+.+.+
T Consensus 65 ~~~~~~~~~---~~~~~~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~----~~iPv~ihEqn~~~G~ank~~~~~a 137 (357)
T COG0707 65 GSLKLLKAP---FKLLKGVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKL----LGIPVIIHEQNAVPGLANKILSKFA 137 (357)
T ss_pred CcHHHHHHH---HHHHHHHHHHHHHHHHcCCCEEEecCCccccHHHHHHHh----CCCCEEEEecCCCcchhHHHhHHhh
Confidence 00111111 222344556678899999999999999999876666654 58999887777642 2235667788
Q ss_pred cEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHh
Q 012492 214 NRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGES 293 (462)
Q Consensus 214 d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~ 293 (462)
+.+.+..+. ...+.+++++.++|+|+++++.. . .....+.... .++++||++|||+|.+.+++++.++...
T Consensus 138 ~~V~~~f~~-----~~~~~~~~~~~~tG~Pvr~~~~~-~-~~~~~~~~~~--~~~~~ilV~GGS~Ga~~ln~~v~~~~~~ 208 (357)
T COG0707 138 KKVASAFPK-----LEAGVKPENVVVTGIPVRPEFEE-L-PAAEVRKDGR--LDKKTILVTGGSQGAKALNDLVPEALAK 208 (357)
T ss_pred ceeeecccc-----ccccCCCCceEEecCcccHHhhc-c-chhhhhhhcc--CCCcEEEEECCcchhHHHHHHHHHHHHH
Confidence 888876665 23466778899999999998875 1 1222222222 2678999999999999999999988777
Q ss_pred hhcccCCCCCceEEEEccCCH--HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEec
Q 012492 294 LLDKETGRPIGQLIIICGRNR--TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILND 371 (462)
Q Consensus 294 l~~~~~~~~~~~~lvv~G~~~--~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~ 371 (462)
+.+ ++++++.+|.+. ++.+.+.+++. +++.+|.+||.++|++||++||++|++|+.|++++|+|+|..|
T Consensus 209 l~~------~~~v~~~~G~~~~~~~~~~~~~~~~---~~v~~f~~dm~~~~~~ADLvIsRaGa~Ti~E~~a~g~P~IliP 279 (357)
T COG0707 209 LAN------RIQVIHQTGKNDLEELKSAYNELGV---VRVLPFIDDMAALLAAADLVISRAGALTIAELLALGVPAILVP 279 (357)
T ss_pred hhh------CeEEEEEcCcchHHHHHHHHhhcCc---EEEeeHHhhHHHHHHhccEEEeCCcccHHHHHHHhCCCEEEeC
Confidence 653 478999999996 23333443332 8999999999999999999999999999999999999999999
Q ss_pred CCCC---ccccchHHHHHCCceeeeCC----HHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHh
Q 012492 372 YIPG---QEKGNVPYVVDNGAGVFTRS----PKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 372 ~~~~---~~~~n~~~l~~~G~g~~~~~----~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~ 442 (462)
++++ +|..|+.++++.|++.++.+ ++.+.+.|.+++ ++|+.+++|++++++...+++.+++++.++.+..
T Consensus 280 ~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~-~~~~~l~~m~~~a~~~~~p~aa~~i~~~~~~~~~ 356 (357)
T COG0707 280 YPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLL-SNPEKLKAMAENAKKLGKPDAAERIADLLLALAK 356 (357)
T ss_pred CCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHh-cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhc
Confidence 9854 88899999999999999876 458999999999 7899999999999999999999999999988764
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=284.02 Aligned_cols=336 Identities=18% Similarity=0.206 Sum_probs=237.0
Q ss_pred CCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHH-HHHHHHhhhHHHHHHhhcC-Ccch
Q 012492 62 TKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMER-SYKFMVKHVQLWKVAFHST-SPKW 139 (462)
Q Consensus 62 ~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~-~y~~~~~~~~l~~~~~~~~-~~~~ 139 (462)
|+||+|.+++|| ||..+|++||++|+++|+ ++.++... .+.....++. .|.. ..+...++.+. ..+.
T Consensus 1 ~~~i~~~~GGTG-GHi~Pala~a~~l~~~g~---~v~~vg~~---~~~e~~l~~~~g~~~----~~~~~~~l~~~~~~~~ 69 (352)
T PRK12446 1 MKKIVFTGGGSA-GHVTPNLAIIPYLKEDNW---DISYIGSH---QGIEKTIIEKENIPY----YSISSGKLRRYFDLKN 69 (352)
T ss_pred CCeEEEEcCCcH-HHHHHHHHHHHHHHhCCC---EEEEEECC---CccccccCcccCCcE----EEEeccCcCCCchHHH
Confidence 678999999996 999999999999998764 44433211 1111111100 0100 00000001110 0011
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCc----ccccCCCcE
Q 012492 140 IHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHP----TWFHPRVNR 215 (462)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~----~~~~~~~d~ 215 (462)
+...+ .......+..+++++++||+||+++++.+.+++.+++. .++|++. |+.+ .++ +.+.+.+++
T Consensus 70 ~~~~~---~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~----~~~p~~i--~e~n-~~~g~~nr~~~~~a~~ 139 (352)
T PRK12446 70 IKDPF---LVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWL----NRVPVLL--HESD-MTPGLANKIALRFASK 139 (352)
T ss_pred HHHHH---HHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHH----cCCCEEE--ECCC-CCccHHHHHHHHhhCE
Confidence 11111 11233445667899999999999999988776666665 4899855 4433 222 345677888
Q ss_pred EEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhh
Q 012492 216 CYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLL 295 (462)
Q Consensus 216 ~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~ 295 (462)
+++..++.. .+++++++.++|+|+++.+... .++..++.++++++++++|++||++|.+.+++++..++..+.
T Consensus 140 v~~~f~~~~-----~~~~~~k~~~tG~Pvr~~~~~~--~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~ 212 (352)
T PRK12446 140 IFVTFEEAA-----KHLPKEKVIYTGSPVREEVLKG--NREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL 212 (352)
T ss_pred EEEEccchh-----hhCCCCCeEEECCcCCcccccc--cchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc
Confidence 887765543 2456678999999999988643 355667788998889999999999999999888887766553
Q ss_pred cccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccc-hhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCC-
Q 012492 296 DKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFE-TQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYI- 373 (462)
Q Consensus 296 ~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~-~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~- 373 (462)
+ +++++++||.+. +.+..... .++...+|. ++|.++|++||++|+++|++|+.|++++|+|+|+.|.+
T Consensus 213 ~------~~~vv~~~G~~~-~~~~~~~~---~~~~~~~f~~~~m~~~~~~adlvIsr~G~~t~~E~~~~g~P~I~iP~~~ 282 (352)
T PRK12446 213 L------KYQIVHLCGKGN-LDDSLQNK---EGYRQFEYVHGELPDILAITDFVISRAGSNAIFEFLTLQKPMLLIPLSK 282 (352)
T ss_pred c------CcEEEEEeCCch-HHHHHhhc---CCcEEecchhhhHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEEcCCC
Confidence 2 478899999875 33333222 245667888 78999999999999999999999999999999999875
Q ss_pred ---CCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHH
Q 012492 374 ---PGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHD 439 (462)
Q Consensus 374 ---~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~ 439 (462)
.++|..|++++.+.|++..+. +++.+.+++.+++ +|++.++ ++++++..++++++|++.+++
T Consensus 283 ~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll-~~~~~~~---~~~~~~~~~~aa~~i~~~i~~ 351 (352)
T PRK12446 283 FASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELS-HNNEKYK---TALKKYNGKEAIQTIIDHISE 351 (352)
T ss_pred CCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHH-cCHHHHH---HHHHHcCCCCHHHHHHHHHHh
Confidence 267888999999999998765 3778999999998 6876653 566778888999999988764
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=266.02 Aligned_cols=345 Identities=19% Similarity=0.205 Sum_probs=237.4
Q ss_pred CCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcch-h
Q 012492 62 TKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKW-I 140 (462)
Q Consensus 62 ~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~-~ 140 (462)
||||+|++++.| ||...+.+|+++|+++|+ ++.++..... ......+. . ..+............. .
T Consensus 1 ~~~i~i~~~g~g-G~~~~~~~la~~L~~~g~---ev~vv~~~~~---~~~~~~~~-~-----g~~~~~~~~~~~~~~~~~ 67 (357)
T PRK00726 1 MKKILLAGGGTG-GHVFPALALAEELKKRGW---EVLYLGTARG---MEARLVPK-A-----GIEFHFIPSGGLRRKGSL 67 (357)
T ss_pred CcEEEEEcCcch-HhhhHHHHHHHHHHhCCC---EEEEEECCCc---hhhhcccc-C-----CCcEEEEeccCcCCCChH
Confidence 689999999996 999999999999999975 4444421110 00000000 0 0000000000000000 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC-CCcccccCCCcEEEEc
Q 012492 141 HSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT-CHPTWFHPRVNRCYCP 219 (462)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~-~~~~~~~~~~d~~i~~ 219 (462)
..+...........++.+++++++||+||+++...+.....+++. .++|+|.+.++... ...+|.++.+|.+++.
T Consensus 68 ~~l~~~~~~~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~----~~~p~v~~~~~~~~~~~~r~~~~~~d~ii~~ 143 (357)
T PRK00726 68 ANLKAPFKLLKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARL----LGIPLVIHEQNAVPGLANKLLARFAKKVATA 143 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHH----cCCCEEEEcCCCCccHHHHHHHHHhchheEC
Confidence 111111112344567778899999999999986654443333333 47899866554321 1234667788999988
Q ss_pred CHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccC
Q 012492 220 SKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKET 299 (462)
Q Consensus 220 s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~ 299 (462)
++... .+ .+..++.++|||++.+++... ..+.+++++++.++++++||+.+.+...+++..+++.+.+
T Consensus 144 ~~~~~---~~--~~~~~i~vi~n~v~~~~~~~~----~~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~--- 211 (357)
T PRK00726 144 FPGAF---PE--FFKPKAVVTGNPVREEILALA----APPARLAGREGKPTLLVVGGSQGARVLNEAVPEALALLPE--- 211 (357)
T ss_pred chhhh---hc--cCCCCEEEECCCCChHhhccc----chhhhccCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhh---
Confidence 87542 12 567899999999988765431 1234567766777788888887776666666444455532
Q ss_pred CCCCceEEEEccCCH--HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCC---C
Q 012492 300 GRPIGQLIIICGRNR--TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYI---P 374 (462)
Q Consensus 300 ~~~~~~~lvv~G~~~--~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~---~ 374 (462)
.+ .+++++|.+. ++.+.++ +++ +|.+.||++++.++|+.||++|+++|+++++|||++|+|+|+++.+ .
T Consensus 212 -~~--~~~~~~G~g~~~~~~~~~~-~~~--~v~~~g~~~~~~~~~~~~d~~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~ 285 (357)
T PRK00726 212 -AL--QVIHQTGKGDLEEVRAAYA-AGI--NAEVVPFIDDMAAAYAAADLVICRAGASTVAELAAAGLPAILVPLPHAAD 285 (357)
T ss_pred -Cc--EEEEEcCCCcHHHHHHHhh-cCC--cEEEeehHhhHHHHHHhCCEEEECCCHHHHHHHHHhCCCEEEecCCCCCc
Confidence 22 4566778775 2333343 443 3999999999999999999999999999999999999999999874 3
Q ss_pred CccccchHHHHHCCceeeeC--C--HHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHh
Q 012492 375 GQEKGNVPYVVDNGAGVFTR--S--PKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 375 ~~~~~n~~~l~~~G~g~~~~--~--~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~ 442 (462)
+++..|++.+.+.|.|++++ + +++++++|.+++ +|++.+++|++++++++++++.+++++.|++++.
T Consensus 286 ~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 286 DHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELL-SDPERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred CcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHH-cCHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 45666888999999998875 4 899999999999 7999999999999999999999999999998865
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-31 Score=264.73 Aligned_cols=338 Identities=21% Similarity=0.261 Sum_probs=235.0
Q ss_pred eEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcC-CcchhhH
Q 012492 64 NVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHST-SPKWIHS 142 (462)
Q Consensus 64 kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~-~~~~~~~ 142 (462)
||+|.++++| ||...+..|+++|.++|| +|.++.... +......+. . -+ +.....+... ....+..
T Consensus 1 ~~~~~~~~~g-G~~~~~~~la~~l~~~G~---ev~v~~~~~---~~~~~~~~~--~-~~---~~~~~~~~~~~~~~~~~~ 67 (350)
T cd03785 1 RILIAGGGTG-GHIFPALALAEELRERGA---EVLFLGTKR---GLEARLVPK--A-GI---PLHTIPVGGLRRKGSLKK 67 (350)
T ss_pred CEEEEecCch-hhhhHHHHHHHHHHhCCC---EEEEEECCC---cchhhcccc--c-CC---ceEEEEecCcCCCChHHH
Confidence 6899999996 999999999999999986 444432110 000000000 0 00 0000000000 0001111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC-CCcccccCCCcEEEEcCH
Q 012492 143 CYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT-CHPTWFHPRVNRCYCPSK 221 (462)
Q Consensus 143 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~-~~~~~~~~~~d~~i~~s~ 221 (462)
+...+.......++.+++++++||+||++++..+.....+++. .++|++.+.++... ....++.+.+|.++++++
T Consensus 68 ~~~~~~~~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~----~~~p~v~~~~~~~~~~~~~~~~~~~~~vi~~s~ 143 (350)
T cd03785 68 LKAPFKLLKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKL----LGIPLVIHEQNAVPGLANRLLARFADRVALSFP 143 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCcchHHHHHHHH----hCCCEEEEcCCCCccHHHHHHHHhhCEEEEcch
Confidence 1111111334556778899999999999887654433334443 47898765444221 112345566899999998
Q ss_pred HHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCC
Q 012492 222 EVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGR 301 (462)
Q Consensus 222 ~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~ 301 (462)
...+. +++.++.++||+++..++.. ... +++++++++.+++++++|+.+.++..+++..+++.+.+
T Consensus 144 ~~~~~-----~~~~~~~~i~n~v~~~~~~~---~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~----- 209 (350)
T cd03785 144 ETAKY-----FPKDKAVVTGNPVREEILAL---DRE-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLR----- 209 (350)
T ss_pred hhhhc-----CCCCcEEEECCCCchHHhhh---hhh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc-----
Confidence 87654 46678999999998776543 112 67788888888888888888776666666555566642
Q ss_pred CCceEEEEccCCH--HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCC---CCc
Q 012492 302 PIGQLIIICGRNR--TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYI---PGQ 376 (462)
Q Consensus 302 ~~~~~lvv~G~~~--~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~---~~~ 376 (462)
+++++++++|.+. ++.+.++++ ..+|++.|+++++.++|+.||++|+++|++|++|||++|+|+|+++.+ .++
T Consensus 210 ~~~~~~~i~G~g~~~~l~~~~~~~--~~~v~~~g~~~~~~~~l~~ad~~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~ 287 (350)
T cd03785 210 KRLQVIHQTGKGDLEEVKKAYEEL--GVNYEVFPFIDDMAAAYAAADLVISRAGASTVAELAALGLPAILIPLPYAADDH 287 (350)
T ss_pred cCeEEEEEcCCccHHHHHHHHhcc--CCCeEEeehhhhHHHHHHhcCEEEECCCHhHHHHHHHhCCCEEEeecCCCCCCc
Confidence 3456666778873 244444443 468999999999999999999999999999999999999999999864 355
Q ss_pred cccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHH
Q 012492 377 EKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVK 435 (462)
Q Consensus 377 ~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~ 435 (462)
|..|++.+.+.|.|+.++ +++++++++.+++ +|++.+++|++++++++++++.++|++
T Consensus 288 ~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll-~~~~~~~~~~~~~~~~~~~~~~~~i~~ 349 (350)
T cd03785 288 QTANARALVKAGAAVLIPQEELTPERLAAALLELL-SDPERLKAMAEAARSLARPDAAERIAD 349 (350)
T ss_pred HHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh-cCHHHHHHHHHHHHhcCCCCHHHHHHh
Confidence 666889999999998876 7899999999999 799999999999999999999999986
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.7e-30 Score=252.61 Aligned_cols=338 Identities=19% Similarity=0.214 Sum_probs=224.9
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcC-Ccchhh
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHST-SPKWIH 141 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~-~~~~~~ 141 (462)
|||+|.++++| ||...+..|+++|.++|| ++.+... +. +......+. +. + +......... ......
T Consensus 1 ~~i~~~~g~~~-g~~~~~~~La~~L~~~g~---eV~vv~~-~~--~~~~~~~~~-~g--~---~~~~i~~~~~~~~~~~~ 67 (348)
T TIGR01133 1 KKVVLAAGGTG-GHIFPALAVAEELIKRGV---EVLWLGT-KR--GLEKRLVPK-AG--I---EFYFIPVGGLRRKGSFR 67 (348)
T ss_pred CeEEEEeCccH-HHHhHHHHHHHHHHhCCC---EEEEEeC-CC--cchhccccc-CC--C---ceEEEeccCcCCCChHH
Confidence 59999999995 999988899999999985 4444321 10 000000000 00 0 0000000000 000001
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC-CCcccccCCCcEEEEcC
Q 012492 142 SCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT-CHPTWFHPRVNRCYCPS 220 (462)
Q Consensus 142 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~-~~~~~~~~~~d~~i~~s 220 (462)
.+...........++.+++++++||+||++++..+.....+++. .++|+|.+.++... ....|+++.+|.+++.+
T Consensus 68 ~l~~~~~~~~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~----~~~p~v~~~~~~~~~~~~~~~~~~~d~ii~~~ 143 (348)
T TIGR01133 68 LIKTPLKLLKAVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKL----LGIPLFHHEQNAVPGLTNKLLSRFAKKVLISF 143 (348)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHH----cCCCEEEECCCCCccHHHHHHHHHhCeeEECc
Confidence 11111111334567788999999999999987654433333443 37888744333211 12356778899999999
Q ss_pred HHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCC
Q 012492 221 KEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETG 300 (462)
Q Consensus 221 ~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~ 300 (462)
+.+.+.+ +..++|||++..+..... .+++++++++.++++++||+.+.+...+.+..+++.+.+
T Consensus 144 ~~~~~~~--------~~~~i~n~v~~~~~~~~~----~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~---- 207 (348)
T TIGR01133 144 PGAKDHF--------EAVLVGNPVRQEIRSLPV----PRERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAE---- 207 (348)
T ss_pred hhHhhcC--------CceEEcCCcCHHHhcccc----hhhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhh----
Confidence 8876443 247899999876654311 134578877778888888888866655555445455543
Q ss_pred CCCceEEEEccCCH--HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCC--Cc
Q 012492 301 RPIGQLIIICGRNR--TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIP--GQ 376 (462)
Q Consensus 301 ~~~~~~lvv~G~~~--~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~--~~ 376 (462)
+++++++++|++. ++.+.++++++...+.+. +. ++.++|+.||++|+++|+++++|||++|+|+|+++.++ ++
T Consensus 208 -~~~~~~~~~g~~~~~~l~~~~~~~~l~~~v~~~-~~-~~~~~l~~ad~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~ 284 (348)
T TIGR01133 208 -KGIQIVHQTGKNDLEKVKNVYQELGIEAIVTFI-DE-NMAAAYAAADLVISRAGASTVAELAAAGVPAILIPYPYAADD 284 (348)
T ss_pred -cCcEEEEECCcchHHHHHHHHhhCCceEEecCc-cc-CHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEeeCCCCccc
Confidence 2456666777764 244445555443334444 32 89999999999999999999999999999999998753 44
Q ss_pred cccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHH
Q 012492 377 EKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDI 437 (462)
Q Consensus 377 ~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i 437 (462)
+..|++.+.+.+.|++++ +++++++++.+++ +|++.+++|++++++++.+++.++|++.|
T Consensus 285 ~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 348 (348)
T TIGR01133 285 QYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLL-LDPANLEAMAEAARKLAKPDAAKRIAELI 348 (348)
T ss_pred hhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHH-cCHHHHHHHHHHHHhcCCccHHHHHHhhC
Confidence 566888888888898874 3899999999999 79999999999999999999999998754
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-27 Score=235.88 Aligned_cols=350 Identities=12% Similarity=0.093 Sum_probs=234.1
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhH
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHS 142 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 142 (462)
|||++++.+..||....+..++++|.+.||+ |.+.... .+..... . ... . .......... ....
T Consensus 1 mki~~~~~p~~gG~~~~~~~la~~L~~~G~~---v~v~~~~---~~~~~~~--~-~~~-~---~~~~~~~~~~--~~~~- 64 (371)
T cd04962 1 MKIGIVCYPTYGGSGVVATELGKALARRGHE---VHFITSS---RPFRLDE--Y-SPN-I---FFHEVEVPQY--PLFQ- 64 (371)
T ss_pred CceeEEEEeCCCCccchHHHHHHHHHhcCCc---eEEEecC---CCcchhh--h-ccC-e---EEEEeccccc--chhh-
Confidence 6999998665569999999999999999863 3333211 1110000 0 000 0 0000000000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC----c------ccccCC
Q 012492 143 CYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH----P------TWFHPR 212 (462)
Q Consensus 143 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~----~------~~~~~~ 212 (462)
.........+.+.+.+++.+||+||++++........+++......++|+|...|+..... + .+..+.
T Consensus 65 --~~~~~~~~~~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~ 142 (371)
T cd04962 65 --YPPYDLALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDITLVGQDPSFQPATRFSIEK 142 (371)
T ss_pred --cchhHHHHHHHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccccccccccchHHHHHHHhh
Confidence 0001223446777889999999999987654333333333221113789988777542110 0 123456
Q ss_pred CcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHH
Q 012492 213 VNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGE 292 (462)
Q Consensus 213 ~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~ 292 (462)
+|.+++.|+...+.+.+.+...+++.+++|+++...+.+ ......+++++++++.++++.+|+....++...++.++ +
T Consensus 143 ~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~-~~~~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~a~-~ 220 (371)
T cd04962 143 SDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRP-KPDEALKRRLGAPEGEKVLIHISNFRPVKRIDDVIRIF-A 220 (371)
T ss_pred CCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCC-CchHHHHHhcCCCCCCeEEEEecccccccCHHHHHHHH-H
Confidence 899999999999888776545678999999998765443 23445667788877777666666665666777766655 4
Q ss_pred hhhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCC----hhhHHHHHHhCC
Q 012492 293 SLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAG----PGTIAEALIRGL 365 (462)
Q Consensus 293 ~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~ 365 (462)
.+.+ .+++++++ +|.+. .+.+..++++..++|.+.|+.+++.++|+.||++|.+|. |++++|||++|+
T Consensus 221 ~l~~----~~~~~l~i-~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~ 295 (371)
T cd04962 221 KVRK----EVPARLLL-VGDGPERSPAERLARELGLQDDVLFLGKQDHVEELLSIADLFLLPSEKESFGLAALEAMACGV 295 (371)
T ss_pred HHHh----cCCceEEE-EcCCcCHHHHHHHHHHcCCCceEEEecCcccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCC
Confidence 4543 23466554 45443 355566667778899999999999999999999998873 899999999999
Q ss_pred CEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhh-cCCcHHHHHHHHHHHHHh
Q 012492 366 PIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKL-AQPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 366 PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~-~~~~~~~~ia~~i~~l~~ 442 (462)
|+|+++.++. .+.+.+...|++++ +.+++++++.+++ +|++.+++|++++++. .+.++++.+++.+.++.+
T Consensus 296 PvI~s~~~~~-----~e~i~~~~~G~~~~~~~~~~l~~~i~~l~-~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 296 PVVASNAGGI-----PEVVKHGETGFLVDVGDVEAMAEYALSLL-EDDELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred CEEEeCCCCc-----hhhhcCCCceEEcCCCCHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999987532 22344445677765 7899999999999 7999999999999988 578999999999999876
Q ss_pred c
Q 012492 443 Q 443 (462)
Q Consensus 443 ~ 443 (462)
+
T Consensus 370 ~ 370 (371)
T cd04962 370 R 370 (371)
T ss_pred h
Confidence 3
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-27 Score=235.80 Aligned_cols=348 Identities=13% Similarity=0.125 Sum_probs=214.2
Q ss_pred CCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEE-EeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchh
Q 012492 62 TKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFV-KDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWI 140 (462)
Q Consensus 62 ~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v-~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 140 (462)
||||+|.++++| ||..+|. ++++|++.+++. +++. +...-+... ++..|+. ........ ...+
T Consensus 1 ~~ki~i~~Ggt~-G~i~~a~-l~~~L~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~-------~~l~~~g~-~~~~ 64 (380)
T PRK00025 1 PLRIAIVAGEVS-GDLLGAG-LIRALKARAPNL-EFVGVGGPRMQAAG-----CESLFDM-------EELAVMGL-VEVL 64 (380)
T ss_pred CceEEEEecCcC-HHHHHHH-HHHHHHhcCCCc-EEEEEccHHHHhCC-----CccccCH-------HHhhhccH-HHHH
Confidence 579999999996 9999999 999999877643 3332 211000000 1111110 00000000 0011
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcc-cchHHHHHHHHcCCCCCCeEEEEecCCCC-CCc---ccccCCCcE
Q 012492 141 HSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPL-MQHIPLWVLKWQGLQKKVIFVTVITDLNT-CHP---TWFHPRVNR 215 (462)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~-~~~~~~~~~~~~~~~~~iP~v~~~~d~~~-~~~---~~~~~~~d~ 215 (462)
... ........++.+++++++||+||+++.. .+......++. .++|++.+.+.... ..+ ..+.+.+|.
T Consensus 65 ~~~---~~~~~~~~~~~~~l~~~kPdivi~~~~~~~~~~~a~~a~~----~~ip~i~~~~~~~~~~~~~~~~~~~~~~d~ 137 (380)
T PRK00025 65 PRL---PRLLKIRRRLKRRLLAEPPDVFIGIDAPDFNLRLEKKLRK----AGIPTIHYVSPSVWAWRQGRAFKIAKATDH 137 (380)
T ss_pred HHH---HHHHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHH----CCCCEEEEeCCchhhcCchHHHHHHHHHhh
Confidence 111 1122345677888999999999987632 11111122333 38998876553210 001 112345789
Q ss_pred EEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCc--cHHHHHHHHHHh
Q 012492 216 CYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMG--PVKETAMALGES 293 (462)
Q Consensus 216 ~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~--~~~~~l~~l~~~ 293 (462)
+++.++...+.+.+.|++ +.++|||+....... .++...+++++++++.+++++++|+.+.. ...+.+.++++.
T Consensus 138 i~~~~~~~~~~~~~~g~~---~~~~G~p~~~~~~~~-~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~ 213 (380)
T PRK00025 138 VLALFPFEAAFYDKLGVP---VTFVGHPLADAIPLL-PDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQL 213 (380)
T ss_pred heeCCccCHHHHHhcCCC---eEEECcCHHHhcccc-cChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
Confidence 999999888888776753 889999987654321 24567788899988888778888877643 333333344445
Q ss_pred hhcccCCCCCceEEEEccCCH---HHHHHHhhc-cCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEE
Q 012492 294 LLDKETGRPIGQLIIICGRNR---TLASTLQSE-EWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIIL 369 (462)
Q Consensus 294 l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~-~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~ 369 (462)
+.+ +.|++++++++|.+. ++.+.++++ ++ ++.+.. +++..+|+.||++|++||.++ +|||++|+|+|+
T Consensus 214 l~~---~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~--~v~~~~--~~~~~~~~~aDl~v~~sG~~~-lEa~a~G~PvI~ 285 (380)
T PRK00025 214 LQQ---RYPDLRFVLPLVNPKRREQIEEALAEYAGL--EVTLLD--GQKREAMAAADAALAASGTVT-LELALLKVPMVV 285 (380)
T ss_pred HHH---hCCCeEEEEecCChhhHHHHHHHHhhcCCC--CeEEEc--ccHHHHHHhCCEEEECccHHH-HHHHHhCCCEEE
Confidence 543 246777777666332 233444433 22 355543 589999999999999988665 599999999999
Q ss_pred ecCCCCc-------cccc-----hHHHHHCCc--eeee--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc---CCcHH
Q 012492 370 NDYIPGQ-------EKGN-----VPYVVDNGA--GVFT--RSPKETARIVTEWFSTKTDELKRMSENALKLA---QPEAV 430 (462)
Q Consensus 370 ~~~~~~~-------~~~n-----~~~l~~~G~--g~~~--~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~---~~~~~ 430 (462)
.+..+.. +..| +..+.+.+. ++.. .+++.+++.+.+++ +|++.+++|++++++.. .+.+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll-~~~~~~~~~~~~~~~~~~~~~~~a~ 364 (380)
T PRK00025 286 GYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLL-ADGARRQALLEGFTELHQQLRCGAD 364 (380)
T ss_pred EEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHhCCCHH
Confidence 8643221 1111 222222222 1222 36889999999999 79999999999863222 66799
Q ss_pred HHHHHHHHHHHhccC
Q 012492 431 VDIVKDIHDLAAQRG 445 (462)
Q Consensus 431 ~~ia~~i~~l~~~~~ 445 (462)
+++++.+.+++.+..
T Consensus 365 ~~~~~~i~~~~~~~~ 379 (380)
T PRK00025 365 ERAAQAVLELLKQRK 379 (380)
T ss_pred HHHHHHHHHHhhhcC
Confidence 999999999887653
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-26 Score=238.54 Aligned_cols=339 Identities=13% Similarity=0.162 Sum_probs=221.2
Q ss_pred CCCCeEEEEecC-----CCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhc
Q 012492 60 ERTKNVLILMSD-----TGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHS 134 (462)
Q Consensus 60 ~~~~kIli~~~~-----~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~ 134 (462)
.++|||++++.. .| |-......|+++|.++|| +|.+....+. .+.....+.. + . ...+...+..
T Consensus 56 ~~~mrI~~~~~~~~~~~~g-G~~~~~~~l~~~L~~~G~---eV~vlt~~~~-~~~~~~g~~v-~----~-~~~~~~~~~~ 124 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVS-GYKNRFQNFIRYLREMGD---EVLVVTTDEG-VPQEFHGAKV-I----G-SWSFPCPFYQ 124 (465)
T ss_pred CCCceEEEEECCcCCcccc-cHHHHHHHHHHHHHHCCC---eEEEEecCCC-CCccccCcee-e----c-cCCcCCccCC
Confidence 567999988632 44 667788999999999986 4444422111 0000000000 0 0 0000000000
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchH-HHHHHHHcCCCCCCeEEEEecCCCCC-C-------
Q 012492 135 TSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHI-PLWVLKWQGLQKKVIFVTVITDLNTC-H------- 205 (462)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~-~~~~~~~~~~~~~iP~v~~~~d~~~~-~------- 205 (462)
... .......++.+.+++.+||+||++++..... .+.+++. .++|+|...|+.... .
T Consensus 125 -------~~~---~~~~~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~----~~ip~V~~~h~~~~~~~~~~~~~~ 190 (465)
T PLN02871 125 -------KVP---LSLALSPRIISEVARFKPDLIHASSPGIMVFGALFYAKL----LCVPLVMSYHTHVPVYIPRYTFSW 190 (465)
T ss_pred -------Cce---eeccCCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHH----hCCCEEEEEecCchhhhhcccchh
Confidence 000 0111223566789999999999987643332 2233443 479998766653210 0
Q ss_pred --------cccccCCCcEEEEcCHHHHHHHHHcCC-CCCcEEEcCCCCChhhhcccCChHHHHHHcCC-CCCCcEEEEEe
Q 012492 206 --------PTWFHPRVNRCYCPSKEVAKRASYFGL-EVSQIRVFGLPIRPSFVRAVISKDNLRLELQM-DPILPAVLLMG 275 (462)
Q Consensus 206 --------~~~~~~~~d~~i~~s~~~~~~l~~~gi-~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l-~~~~~~iLv~g 275 (462)
..++.+.+|.++++|+...+.+.+.+. +.+++.+++|+++.+.+.+.......+.++.. +++.++ +++.
T Consensus 191 ~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~-i~~v 269 (465)
T PLN02871 191 LVKPMWDIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSEEMRARLSGGEPEKPL-IVYV 269 (465)
T ss_pred hHHHHHHHHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccccHHHHHHhcCCCCCCeE-EEEe
Confidence 022345789999999999999887764 46789999999997765543334455665533 334554 4555
Q ss_pred CCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC
Q 012492 276 GGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG 353 (462)
Q Consensus 276 G~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg 353 (462)
|+++..+..+.+..+++.+ ++++++ ++|++. ..+.++++-...+|.|.|++ +++.++|+.||++|++|.
T Consensus 270 Grl~~~K~~~~li~a~~~~-------~~~~l~-ivG~G~-~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv~V~pS~ 340 (465)
T PLN02871 270 GRLGAEKNLDFLKRVMERL-------PGARLA-FVGDGP-YREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVMPSE 340 (465)
T ss_pred CCCchhhhHHHHHHHHHhC-------CCcEEE-EEeCCh-HHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCEEEECCc
Confidence 6777655555554444443 467655 556664 23444443223589999998 789999999999999874
Q ss_pred ----hhhHHHHHHhCCCEEEecCCCCccccchHHHHH---CCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 012492 354 ----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVD---NGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKL 424 (462)
Q Consensus 354 ----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~---~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~ 424 (462)
|.+++|||++|+|+|+++..+. .+.+.+ .+.|++++ |+++++++|.+++ +|++.+++|++++++.
T Consensus 341 ~E~~g~~vlEAmA~G~PVI~s~~gg~-----~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll-~~~~~~~~~~~~a~~~ 414 (465)
T PLN02871 341 SETLGFVVLEAMASGVPVVAARAGGI-----PDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL-ADPELRERMGAAAREE 414 (465)
T ss_pred ccccCcHHHHHHHcCCCEEEcCCCCc-----HhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH-hCHHHHHHHHHHHHHH
Confidence 8889999999999999986432 223333 45677764 7999999999999 7999999999999999
Q ss_pred cCCcHHHHHHHHHHH
Q 012492 425 AQPEAVVDIVKDIHD 439 (462)
Q Consensus 425 ~~~~~~~~ia~~i~~ 439 (462)
++.++|+.+++.+++
T Consensus 415 ~~~fsw~~~a~~l~~ 429 (465)
T PLN02871 415 VEKWDWRAATRKLRN 429 (465)
T ss_pred HHhCCHHHHHHHHHH
Confidence 989999999999986
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.7e-26 Score=226.04 Aligned_cols=343 Identities=12% Similarity=0.071 Sum_probs=214.4
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhH
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHS 142 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 142 (462)
.||+|.+++|| ||..++ +|+++|++++++. + +++...+.+.. ..++..|+.. .+.-.++. ..+..
T Consensus 6 ~ki~i~aGgts-Ghi~pa-al~~~l~~~~~~~-~-~~g~gg~~m~~---~g~~~~~~~~----~l~v~G~~----~~l~~ 70 (385)
T TIGR00215 6 PTIALVAGEAS-GDILGA-GLRQQLKEHYPNA-R-FIGVAGPRMAA---EGCEVLYSME----ELSVMGLR----EVLGR 70 (385)
T ss_pred CeEEEEeCCcc-HHHHHH-HHHHHHHhcCCCc-E-EEEEccHHHHh---CcCccccChH----HhhhccHH----HHHHH
Confidence 48999999995 999999 9999999987642 2 32311100000 0001111110 00001111 01111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHH--HHHHcCCCCCCeEEEEecC-CCCCCc----ccccCCCcE
Q 012492 143 CYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLW--VLKWQGLQKKVIFVTVITD-LNTCHP----TWFHPRVNR 215 (462)
Q Consensus 143 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~--~~~~~~~~~~iP~v~~~~d-~~~~~~----~~~~~~~d~ 215 (462)
.+. -....+++.+.+++++||+||+++. ....... +++. .++|++.++.- .+ ... +.+.+.+|+
T Consensus 71 ~~~---~~~~~~~~~~~l~~~kPd~vi~~g~-~~~~~~~a~aa~~----~gip~v~~i~P~~w-aw~~~~~r~l~~~~d~ 141 (385)
T TIGR00215 71 LGR---LLKIRKEVVQLAKQAKPDLLVGIDA-PDFNLTKELKKKD----PGIKIIYYISPQVW-AWRKWRAKKIEKATDF 141 (385)
T ss_pred HHH---HHHHHHHHHHHHHhcCCCEEEEeCC-CCccHHHHHHHhh----CCCCEEEEeCCcHh-hcCcchHHHHHHHHhH
Confidence 111 1233457778899999999999985 3332222 3332 48999865431 11 111 234457899
Q ss_pred EEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCc--cHHHHHHHHHHh
Q 012492 216 CYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMG--PVKETAMALGES 293 (462)
Q Consensus 216 ~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~--~~~~~l~~l~~~ 293 (462)
+++.++...+.+.+.|+ +..++|||+++.+.....++...|++++++++.+++++++||.+.+ +....+.++++.
T Consensus 142 v~~~~~~e~~~~~~~g~---~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~ 218 (385)
T TIGR00215 142 LLAILPFEKAFYQKKNV---PCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQL 218 (385)
T ss_pred hhccCCCcHHHHHhcCC---CEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHH
Confidence 99999888877766554 5678999998765432135667788899988889999999998864 222233333345
Q ss_pred hhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEe
Q 012492 294 LLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILN 370 (462)
Q Consensus 294 l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~ 370 (462)
+.+ ..|++++++..+.+. .+.+..+.++...++.+.+ .++..+|++||++|++||..|+ |++++|+|+|+.
T Consensus 219 l~~---~~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~l~aADl~V~~SGt~tl-Ea~a~G~P~Vv~ 292 (385)
T TIGR00215 219 LEQ---QEPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLID--GDARKAMFAADAALLASGTAAL-EAALIKTPMVVG 292 (385)
T ss_pred HHH---hCCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEEC--chHHHHHHhCCEEeecCCHHHH-HHHHcCCCEEEE
Confidence 543 246777655444432 2333334444445666554 3788999999999999998776 999999999998
Q ss_pred c----CCC---C-----ccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCH----HHHHHHHHHHHhh----cC
Q 012492 371 D----YIP---G-----QEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKT----DELKRMSENALKL----AQ 426 (462)
Q Consensus 371 ~----~~~---~-----~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~----~~~~~m~~~a~~~----~~ 426 (462)
. .+. . .+..|+..+.+.++...+- +++.+++.+.+++ +|+ +.+++|.+...+. ..
T Consensus 293 yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~l~~ 371 (385)
T TIGR00215 293 YRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLL-ENGLKAYKEMHRERQFFEELRQRIYC 371 (385)
T ss_pred EcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHh-cCCcccHHHHHHHHHHHHHHHHHhcC
Confidence 3 321 1 1566888887777654332 4889999999999 788 7777776654443 44
Q ss_pred CcHHHHHHHHHHH
Q 012492 427 PEAVVDIVKDIHD 439 (462)
Q Consensus 427 ~~~~~~ia~~i~~ 439 (462)
..++++.++.|.+
T Consensus 372 ~~~~~~~a~~i~~ 384 (385)
T TIGR00215 372 NADSERAAQAVLE 384 (385)
T ss_pred CCHHHHHHHHHhh
Confidence 5677788887754
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-25 Score=220.08 Aligned_cols=343 Identities=16% Similarity=0.105 Sum_probs=226.0
Q ss_pred eEEEEecCCC-chHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhH
Q 012492 64 NVLILMSDTG-GGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHS 142 (462)
Q Consensus 64 kIli~~~~~G-~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 142 (462)
|||+++.+.| ||+...+.+|+++|.++|+ +|.+....+. + .... ...... ....... ....
T Consensus 1 ~il~~~~~~~~gG~~~~~~~l~~~L~~~g~---~v~v~~~~~~--~--~~~~---~~~~~~---~~~~~~~----~~~~- 62 (360)
T cd04951 1 KILYVITGLGLGGAEKQVVDLADQFVAKGH---QVAIISLTGE--S--EVKP---PIDATI---ILNLNMS----KNPL- 62 (360)
T ss_pred CeEEEecCCCCCCHHHHHHHHHHhcccCCc---eEEEEEEeCC--C--Cccc---hhhccc---eEEeccc----ccch-
Confidence 5888876533 6999999999999999886 3443322111 1 0000 000000 0000000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC--ccc----ccCCCcEE
Q 012492 143 CYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH--PTW----FHPRVNRC 216 (462)
Q Consensus 143 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~--~~~----~~~~~d~~ 216 (462)
. .......+.+++++++||+|+++.+..... ..+.+.. ..++|++...|+..... ..| .....+.+
T Consensus 63 --~---~~~~~~~~~~~~~~~~pdiv~~~~~~~~~~-~~l~~~~--~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ 134 (360)
T cd04951 63 --S---FLLALWKLRKILRQFKPDVVHAHMFHANIF-ARLLRLF--LPSPPLICTAHSKNEGGRLRMLAYRLTDFLSDLT 134 (360)
T ss_pred --h---hHHHHHHHHHHHHhcCCCEEEEcccchHHH-HHHHHhh--CCCCcEEEEeeccCchhHHHHHHHHHHhhccCce
Confidence 0 112234566789999999999987654333 2233332 14678877666543110 111 22345677
Q ss_pred EEcCHHHHHHHHHcC-CCCCcEEEcCCCCChhhhccc-CChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhh
Q 012492 217 YCPSKEVAKRASYFG-LEVSQIRVFGLPIRPSFVRAV-ISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESL 294 (462)
Q Consensus 217 i~~s~~~~~~l~~~g-i~~~~i~v~g~pv~~~~~~~~-~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l 294 (462)
++.+....+.+.+.+ ++.+++.+++|+++...+... ......+++++++++.++++.+|+....++...+++++ ..+
T Consensus 135 ~~~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~-~~l 213 (360)
T cd04951 135 TNVSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAF-AKL 213 (360)
T ss_pred EEEcHHHHHHHHhccCCCcccEEEEccccchhhcCcchHHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHH-HHH
Confidence 788888888887764 677899999999986554321 23445777888887777666666655666677777665 444
Q ss_pred hcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCC----hhhHHHHHHhCCCE
Q 012492 295 LDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAG----PGTIAEALIRGLPI 367 (462)
Q Consensus 295 ~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~Pv 367 (462)
.+. .|+++++++ |.+. ++.+.+++++...+|.+.|+.+++.++|+.||++|.+|. |++++|||++|+|+
T Consensus 214 ~~~---~~~~~l~i~-G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~Pv 289 (360)
T cd04951 214 LSD---YLDIKLLIA-GDGPLRATLERLIKALGLSNRVKLLGLRDDIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPV 289 (360)
T ss_pred Hhh---CCCeEEEEE-cCCCcHHHHHHHHHhcCCCCcEEEecccccHHHHHHhhceEEecccccCCChHHHHHHHcCCCE
Confidence 432 367776654 4443 355566667777899999999999999999999999875 89999999999999
Q ss_pred EEecCCCCccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHh
Q 012492 368 ILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 368 I~~~~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~ 442 (462)
|+++.++.. +.+.+.|..+...+++++++++.++++++++.++.++++.....+.++++.+++.++++.+
T Consensus 290 I~~~~~~~~-----e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 290 VATDAGGVR-----EVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred EEecCCChh-----hEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 998864322 2344455555567899999999999855777788888774455678999999999999875
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-24 Score=219.02 Aligned_cols=263 Identities=17% Similarity=0.193 Sum_probs=189.2
Q ss_pred hCCCEEEECCcccch--HHHHHHHHcCCCCCCeEEEEecCCCC--------CCc-----------ccccCCCcEEEEcCH
Q 012492 163 YKPDIIISVHPLMQH--IPLWVLKWQGLQKKVIFVTVITDLNT--------CHP-----------TWFHPRVNRCYCPSK 221 (462)
Q Consensus 163 ~kPDvVi~~~~~~~~--~~~~~~~~~~~~~~iP~v~~~~d~~~--------~~~-----------~~~~~~~d~~i~~s~ 221 (462)
++||+||++.+.... ...++++. .++|+|..++|+.. ... .+..+.+|.++++|+
T Consensus 105 ~~~Div~~~~p~~~~~~~~~~~~~~----~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~ 180 (412)
T PRK10307 105 WRPDRVIGVVPTLFCAPGARLLARL----SGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISR 180 (412)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHh----hCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCH
Confidence 799999998765322 22233443 47898877777531 000 123456899999999
Q ss_pred HHHHHHHHcCCCCCcEEEcCCCCChhhhcccC--ChHHHHHHcCCCCCCcEEEEEeCCCCC-ccHHHHHHHHHHhhhccc
Q 012492 222 EVAKRASYFGLEVSQIRVFGLPIRPSFVRAVI--SKDNLRLELQMDPILPAVLLMGGGEGM-GPVKETAMALGESLLDKE 298 (462)
Q Consensus 222 ~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~--~~~~~r~~l~l~~~~~~iLv~gG~~~~-~~~~~~l~~l~~~l~~~~ 298 (462)
...+.+.+.+++.+++.+++|+++.+.+.+.. .+..++++++++++.+++ ++.|+.+. +++..+++++ +.+.+
T Consensus 181 ~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~G~l~~~kg~~~li~a~-~~l~~-- 256 (412)
T PRK10307 181 SMMNKAREKGVAAEKVIFFPNWSEVARFQPVADADVDALRAQLGLPDGKKIV-LYSGNIGEKQGLELVIDAA-RRLRD-- 256 (412)
T ss_pred HHHHHHHHcCCCcccEEEECCCcCHhhcCCCCccchHHHHHHcCCCCCCEEE-EEcCccccccCHHHHHHHH-HHhcc--
Confidence 99999888888888999999999876554321 234678889998766544 45566665 5555566554 55543
Q ss_pred CCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC--------hhhHHHHHHhCC
Q 012492 299 TGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG--------PGTIAEALIRGL 365 (462)
Q Consensus 299 ~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg--------~~t~~EAla~G~ 365 (462)
.+++++++ +|.+. ++++.++++++. +|.|.|++ +++.++|+.||++|.++- ++.+.|||++|+
T Consensus 257 --~~~~~l~i-vG~g~~~~~l~~~~~~~~l~-~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~ 332 (412)
T PRK10307 257 --RPDLIFVI-CGQGGGKARLEKMAQCRGLP-NVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGR 332 (412)
T ss_pred --CCCeEEEE-ECCChhHHHHHHHHHHcCCC-ceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCC
Confidence 46777654 56654 245556666665 79999997 689999999999887652 455899999999
Q ss_pred CEEEecCCCCccccchHHHHHCCceeee--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcC-CcHHHHHHHHHHHHHh
Q 012492 366 PIILNDYIPGQEKGNVPYVVDNGAGVFT--RSPKETARIVTEWFSTKTDELKRMSENALKLAQ-PEAVVDIVKDIHDLAA 442 (462)
Q Consensus 366 PvI~~~~~~~~~~~n~~~l~~~G~g~~~--~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~-~~~~~~ia~~i~~l~~ 442 (462)
|||+++.++.. ...+++ +.|+++ .|+++++++|.+++ +|++.+++|++++++.+. .++++.+++.++++++
T Consensus 333 PVi~s~~~g~~----~~~~i~-~~G~~~~~~d~~~la~~i~~l~-~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~ 406 (412)
T PRK10307 333 NVVATAEPGTE----LGQLVE-GIGVCVEPESVEALVAAIAALA-RQALLRPKLGTVAREYAERTLDKENVLRQFIADIR 406 (412)
T ss_pred CEEEEeCCCch----HHHHHh-CCcEEeCCCCHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 99999864321 112344 567666 47999999999999 799999999999999875 6899999999988876
Q ss_pred c
Q 012492 443 Q 443 (462)
Q Consensus 443 ~ 443 (462)
+
T Consensus 407 ~ 407 (412)
T PRK10307 407 G 407 (412)
T ss_pred H
Confidence 3
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-24 Score=219.23 Aligned_cols=266 Identities=16% Similarity=0.102 Sum_probs=193.6
Q ss_pred hCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC---------c---------ccccCCCcEEEEcCHHHH
Q 012492 163 YKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH---------P---------TWFHPRVNRCYCPSKEVA 224 (462)
Q Consensus 163 ~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~---------~---------~~~~~~~d~~i~~s~~~~ 224 (462)
.+||+|+++.......+..+++. .++|+|...|+..... + .+..+.+|.+++.|+...
T Consensus 100 ~~~Diih~h~~~~~~~~~~~~~~----~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~ 175 (405)
T TIGR03449 100 GYYDLIHSHYWLSGQVGWLLRDR----WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEA 175 (405)
T ss_pred CCCCeEEechHHHHHHHHHHHHh----cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHH
Confidence 48999999874443332233332 4789988777642100 0 012356899999999888
Q ss_pred HHHHH-cCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCC
Q 012492 225 KRASY-FGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPI 303 (462)
Q Consensus 225 ~~l~~-~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~ 303 (462)
+.+.+ .+.+.+++.+++|+++...+.+ .++...+.+++++++.++++++|+....++...++.++ +.+.+. .|+
T Consensus 176 ~~~~~~~~~~~~ki~vi~ngvd~~~~~~-~~~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~li~a~-~~l~~~---~~~ 250 (405)
T TIGR03449 176 RDLVRHYDADPDRIDVVAPGADLERFRP-GDRATERARLGLPLDTKVVAFVGRIQPLKAPDVLLRAV-AELLDR---DPD 250 (405)
T ss_pred HHHHHHcCCChhhEEEECCCcCHHHcCC-CcHHHHHHhcCCCCCCcEEEEecCCCcccCHHHHHHHH-HHHHhh---CCC
Confidence 87765 5777789999999999876654 35566788899877777666655444455566666555 444332 344
Q ss_pred --ceEEEEccC---C-H---HHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC----hhhHHHHHHhCCCEE
Q 012492 304 --GQLIIICGR---N-R---TLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG----PGTIAEALIRGLPII 368 (462)
Q Consensus 304 --~~~lvv~G~---~-~---~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI 368 (462)
+++++++|. + . ++.+..+++++.++|.|.|++ +++.++|+.||++|.+|. |.+++|||++|+|+|
T Consensus 251 ~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi 330 (405)
T TIGR03449 251 RNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQACGTPVV 330 (405)
T ss_pred cceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEE
Confidence 666665542 2 1 355566677888899999997 689999999999998763 889999999999999
Q ss_pred EecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 369 LNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 369 ~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
+++.++.. +.+.+.+.|++++ |+++++++|.+++ ++++.+++|++++++.++.++|+.+++.+.++..+
T Consensus 331 ~~~~~~~~-----e~i~~~~~g~~~~~~d~~~la~~i~~~l-~~~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~ 401 (405)
T TIGR03449 331 AARVGGLP-----VAVADGETGLLVDGHDPADWADALARLL-DDPRTRIRMGAAAVEHAAGFSWAATADGLLSSYRD 401 (405)
T ss_pred EecCCCcH-----hhhccCCceEECCCCCHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99874322 2344445677775 7999999999999 79999999999999988899999999999998864
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.8e-24 Score=212.52 Aligned_cols=345 Identities=13% Similarity=0.078 Sum_probs=219.0
Q ss_pred CeEEEEecCC-CchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhh
Q 012492 63 KNVLILMSDT-GGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIH 141 (462)
Q Consensus 63 ~kIli~~~~~-G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 141 (462)
.||+.+..+. .||..+....|+++|.+.++ ++.++...+ .+ ........ .+..+.........
T Consensus 2 ~~il~ii~~~~~GG~e~~~~~l~~~l~~~~~---~~~v~~~~~--~~----~~~~~~~~-------~~i~~~~~~~~~~~ 65 (374)
T TIGR03088 2 PLIVHVVYRFDVGGLENGLVNLINHLPADRY---RHAVVALTE--VS----AFRKRIQR-------PDVAFYALHKQPGK 65 (374)
T ss_pred ceEEEEeCCCCCCcHHHHHHHHHhhcccccc---ceEEEEcCC--CC----hhHHHHHh-------cCceEEEeCCCCCC
Confidence 4788777653 36999999999999988764 333331111 01 11110100 00001111000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEE-EecC--CCCCC-cc--------cc
Q 012492 142 SCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVT-VITD--LNTCH-PT--------WF 209 (462)
Q Consensus 142 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~-~~~d--~~~~~-~~--------~~ 209 (462)
.....+++.+++++++||+|+++++.... ...+++. .++|... ..|. ....+ .. +.
T Consensus 66 -------~~~~~~~l~~~l~~~~~Divh~~~~~~~~-~~~~~~~----~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~ 133 (374)
T TIGR03088 66 -------DVAVYPQLYRLLRQLRPDIVHTRNLAALE-AQLPAAL----AGVPARIHGEHGRDVFDLDGSNWKYRWLRRLY 133 (374)
T ss_pred -------ChHHHHHHHHHHHHhCCCEEEEcchhHHH-HHHHHHh----cCCCeEEEeecCcccccchhhHHHHHHHHHHH
Confidence 12334567788999999999998654322 2233333 2556422 2221 11111 11 12
Q ss_pred cCCCcEEEEcCHHHHHHHHH-cCCCCCcEEEcCCCCChhhhcccC-ChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHH
Q 012492 210 HPRVNRCYCPSKEVAKRASY-FGLEVSQIRVFGLPIRPSFVRAVI-SKDNLRLELQMDPILPAVLLMGGGEGMGPVKETA 287 (462)
Q Consensus 210 ~~~~d~~i~~s~~~~~~l~~-~gi~~~~i~v~g~pv~~~~~~~~~-~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l 287 (462)
.+.+|.+++.|+...+.+.+ .+++.+++.+++|+++...+.+.. .+...+++...+++.++++.+|+....++...++
T Consensus 134 ~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li 213 (374)
T TIGR03088 134 RPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADESVVVGTVGRLQAVKDQPTLV 213 (374)
T ss_pred HhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHhhcCCCCCeEEEEEecCCcccCHHHHH
Confidence 34678999999999988876 477888999999999876554321 2223333333444455555555444456666666
Q ss_pred HHHHHhhhcccC-CCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCC----hhhHHH
Q 012492 288 MALGESLLDKET-GRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAG----PGTIAE 359 (462)
Q Consensus 288 ~~l~~~l~~~~~-~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg----~~t~~E 359 (462)
+++. .+.+... ..+++++++ +|.+. ++.+.++++++..++.|.|+.+++.++|+.||++|++|. |.+++|
T Consensus 214 ~a~~-~l~~~~~~~~~~~~l~i-~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~pS~~Eg~~~~~lE 291 (374)
T TIGR03088 214 RAFA-LLVRQLPEGAERLRLVI-VGDGPARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSLAEGISNTILE 291 (374)
T ss_pred HHHH-HHHHhCcccccceEEEE-ecCCchHHHHHHHHHHcCCcceEEEcCCcCCHHHHHHhcCEEEeccccccCchHHHH
Confidence 6553 3332111 123566554 45543 355666677888889999999999999999999998873 899999
Q ss_pred HHHhCCCEEEecCCCCccccchHHHHHCCceeee--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc-CCcHHHHHHHH
Q 012492 360 ALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFT--RSPKETARIVTEWFSTKTDELKRMSENALKLA-QPEAVVDIVKD 436 (462)
Q Consensus 360 Ala~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~--~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~-~~~~~~~ia~~ 436 (462)
||++|+|+|+++.++ ..+.+.+...|+++ .+++++++++.+++ +|++.+++|++++++.+ +.++++.+++.
T Consensus 292 Ama~G~Pvv~s~~~g-----~~e~i~~~~~g~~~~~~d~~~la~~i~~l~-~~~~~~~~~~~~a~~~~~~~fs~~~~~~~ 365 (374)
T TIGR03088 292 AMASGLPVIATAVGG-----NPELVQHGVTGALVPPGDAVALARALQPYV-SDPAARRAHGAAGRARAEQQFSINAMVAA 365 (374)
T ss_pred HHHcCCCEEEcCCCC-----cHHHhcCCCceEEeCCCCHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 999999999998743 23334444457766 47999999999999 79999999999999887 68999999999
Q ss_pred HHHHHhc
Q 012492 437 IHDLAAQ 443 (462)
Q Consensus 437 i~~l~~~ 443 (462)
++++.++
T Consensus 366 ~~~~y~~ 372 (374)
T TIGR03088 366 YAGLYDQ 372 (374)
T ss_pred HHHHHHH
Confidence 9998753
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-23 Score=207.07 Aligned_cols=312 Identities=19% Similarity=0.158 Sum_probs=213.7
Q ss_pred CeEEEEecCCC-chHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhh
Q 012492 63 KNVLILMSDTG-GGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIH 141 (462)
Q Consensus 63 ~kIli~~~~~G-~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 141 (462)
|||+++..+.+ +|+...+..++++|.++||. +.+++.+ +.
T Consensus 1 MkIl~~~~~~~~gG~~~~~~~l~~~l~~~G~~-v~v~~~~------~~-------------------------------- 41 (365)
T cd03825 1 MKVLHLNTSDISGGAARAAYRLHRALQAAGVD-STMLVQE------KK-------------------------------- 41 (365)
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHHHhcCCc-eeEEEee------cc--------------------------------
Confidence 79999986533 79999999999999999862 2333221 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCc---------------
Q 012492 142 SCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHP--------------- 206 (462)
Q Consensus 142 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~--------------- 206 (462)
.+.+.+++.+||+|+++...........+.... .++|+|...||......
T Consensus 42 -------------~~~~~~~~~~~diih~~~~~~~~~~~~~~~~~~--~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~ 106 (365)
T cd03825 42 -------------ALISKIEIINADIVHLHWIHGGFLSIEDLSKLL--DRKPVVWTLHDMWPFTGGCHYPGGCDRYKTEC 106 (365)
T ss_pred -------------hhhhChhcccCCEEEEEccccCccCHHHHHHHH--cCCCEEEEcccCcccccccCCccccccccccC
Confidence 122346788999998866433222222222211 27899988887531100
Q ss_pred ---------------cc--------ccCCCcEEEEcCHHHHHHHHHcC-CCCCcEEEcCCCCChhhhcccCChHHHHHHc
Q 012492 207 ---------------TW--------FHPRVNRCYCPSKEVAKRASYFG-LEVSQIRVFGLPIRPSFVRAVISKDNLRLEL 262 (462)
Q Consensus 207 ---------------~~--------~~~~~d~~i~~s~~~~~~l~~~g-i~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l 262 (462)
.| +....+.++++|+...+.+.+.+ ++..++.+++|+++...+.+ .++...+..+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~-~~~~~~~~~~ 185 (365)
T cd03825 107 GNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRP-RDKREARKRL 185 (365)
T ss_pred CCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCC-CcHHHHHHHh
Confidence 00 01234567888888887777654 67789999999998776543 4566677888
Q ss_pred CCCCCCcEEEEEeCCCC--CccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccch---h
Q 012492 263 QMDPILPAVLLMGGGEG--MGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFET---Q 337 (462)
Q Consensus 263 ~l~~~~~~iLv~gG~~~--~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~---~ 337 (462)
+++++.+++++.+.... .++...++.++ ..+.+. ..+++++ +++|.+..... .+...++.+.|+++ +
T Consensus 186 ~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~-~~l~~~--~~~~~~~-~i~G~~~~~~~----~~~~~~v~~~g~~~~~~~ 257 (365)
T cd03825 186 GLPADKKIILFGAVGGTDPRKGFDELIEAL-KRLAER--WKDDIEL-VVFGASDPEIP----PDLPFPVHYLGSLNDDES 257 (365)
T ss_pred CCCCCCeEEEEEecCCCccccCHHHHHHHH-HHhhhc--cCCCeEE-EEeCCCchhhh----ccCCCceEecCCcCCHHH
Confidence 88877665544443333 45555666555 445431 1256664 45566543111 13456899999985 6
Q ss_pred HHHHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCH
Q 012492 338 MEKWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKT 411 (462)
Q Consensus 338 ~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~ 411 (462)
+..+|+.||+++++|. |.+++|||++|+|+|+++.++..+ .+.+.+.|++++ +++++++++.+++ +|+
T Consensus 258 ~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e-----~~~~~~~g~~~~~~~~~~~~~~l~~l~-~~~ 331 (365)
T cd03825 258 LALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPD-----IVDHGVTGYLAKPGDPEDLAEGIEWLL-ADP 331 (365)
T ss_pred HHHHHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChh-----heeCCCceEEeCCCCHHHHHHHHHHHH-hCH
Confidence 8899999999999874 899999999999999998754322 233344677665 7899999999999 799
Q ss_pred HHHHHHHHHHHhhcC-CcHHHHHHHHHHHHHhc
Q 012492 412 DELKRMSENALKLAQ-PEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 412 ~~~~~m~~~a~~~~~-~~~~~~ia~~i~~l~~~ 443 (462)
+.+++|++++++.+. .++++.+++.+.+++++
T Consensus 332 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 332 DEREELGEAARELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999999998874 68999999999998753
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-23 Score=207.07 Aligned_cols=267 Identities=16% Similarity=0.115 Sum_probs=185.5
Q ss_pred HHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC--cccccCCCcEEEEcCHHHHHHHHH
Q 012492 152 YAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH--PTWFHPRVNRCYCPSKEVAKRASY 229 (462)
Q Consensus 152 ~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~--~~~~~~~~d~~i~~s~~~~~~l~~ 229 (462)
....+.+.+++.+||+|++++.........+++. .++|+|...|+..... ..++...+|.+++.|+...+.+.+
T Consensus 66 ~~~~l~~~~~~~~~dii~~~~~~~~~~~~~~~~~----~~~~~i~~~h~~~~~~~~~~~~~~~~~~vi~~s~~~~~~~~~ 141 (355)
T cd03819 66 NVARLRRLIREEKVDIVHARSRAPAWSAYLAARR----TRPPFVTTVHGFYSVNFRYNAIMARGDRVIAVSNFIADHIRE 141 (355)
T ss_pred HHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHh----cCCCEEEEeCCchhhHHHHHHHHHhcCEEEEeCHHHHHHHHH
Confidence 3456678899999999999886654443333333 4899998888865211 122345689999999999988874
Q ss_pred -cCCCCCcEEEcCCCCChhhhcccC-Ch---HHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCc
Q 012492 230 -FGLEVSQIRVFGLPIRPSFVRAVI-SK---DNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIG 304 (462)
Q Consensus 230 -~gi~~~~i~v~g~pv~~~~~~~~~-~~---~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~ 304 (462)
.+++.+++.+++|+++...+.... .+ ..++++++++++.++++.+|+....++...+++.+ +.+.+. .+++
T Consensus 142 ~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~-~~l~~~---~~~~ 217 (355)
T cd03819 142 NYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEAL-ARLKKD---DPDV 217 (355)
T ss_pred hcCCChhhEEEecCCccccccCccccchHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHH-HHHHhc---CCCe
Confidence 588888999999999876554311 11 12567777776666555555433345555555544 555442 3567
Q ss_pred eEEEEccCCH--HH----HHHHhhccCCCCeEEeccchhHHHHHHhcchheecC-----ChhhHHHHHHhCCCEEEecCC
Q 012492 305 QLIIICGRNR--TL----ASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKA-----GPGTIAEALIRGLPIILNDYI 373 (462)
Q Consensus 305 ~~lvv~G~~~--~l----~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~s-----g~~t~~EAla~G~PvI~~~~~ 373 (462)
+++++++... .+ .+.+++++...+|.+.|+.+++.++|+.||++|++| .|++++|||++|+|+|+++.+
T Consensus 218 ~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~ 297 (355)
T cd03819 218 HLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG 297 (355)
T ss_pred EEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCCcccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC
Confidence 7655443322 12 234455677789999999999999999999999887 288999999999999999864
Q ss_pred CCccccchHHHHHCCceeee--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC-cHHH
Q 012492 374 PGQEKGNVPYVVDNGAGVFT--RSPKETARIVTEWFSTKTDELKRMSENALKLAQP-EAVV 431 (462)
Q Consensus 374 ~~~~~~n~~~l~~~G~g~~~--~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~-~~~~ 431 (462)
+. .+.+.+.+.|+.+ .++++++++|..++..+++.+++|++++++.+.. ++++
T Consensus 298 ~~-----~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~ 353 (355)
T cd03819 298 GA-----RETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYD 353 (355)
T ss_pred Cc-----HHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhc
Confidence 32 2234444467665 4799999999766646899999999999998753 4443
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-23 Score=204.17 Aligned_cols=341 Identities=14% Similarity=0.086 Sum_probs=223.6
Q ss_pred eEEEEecC--CCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhh
Q 012492 64 NVLILMSD--TGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIH 141 (462)
Q Consensus 64 kIli~~~~--~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 141 (462)
||+++... . ||+...+..|+++|.+.++ ++.+..... .+ ........ .+..+........
T Consensus 1 ~i~~i~~~~~~-gG~~~~~~~l~~~l~~~~~---~v~~~~~~~--~~----~~~~~~~~-------~~i~v~~~~~~~~- 62 (365)
T cd03807 1 KVLHVITGLDV-GGAERMLVRLLKGLDRDRF---EHVVISLTD--RG----ELGEELEE-------AGVPVYCLGKRPG- 62 (365)
T ss_pred CeEEEEeeccC-ccHHHHHHHHHHHhhhccc---eEEEEecCc--ch----hhhHHHHh-------cCCeEEEEecccc-
Confidence 67777653 5 5999999999999988765 333322111 01 00000000 0000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC-----------ccccc
Q 012492 142 SCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH-----------PTWFH 210 (462)
Q Consensus 142 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~-----------~~~~~ 210 (462)
........++.+++++.+||+|+++............+.. .+.|++...|+..... ..++.
T Consensus 63 -----~~~~~~~~~~~~~~~~~~~div~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (365)
T cd03807 63 -----RPDPGALLRLYKLIRRLRPDVVHTWMYHADLYGGLAARLA---GVPPVIWGIRHSDLDLGKKSTRLVARLRRLLS 134 (365)
T ss_pred -----cccHHHHHHHHHHHHhhCCCEEEeccccccHHHHHHHHhc---CCCcEEEEecCCcccccchhHhHHHHHHHHhc
Confidence 0112344567788999999999998755433322233321 3678887777654211 11234
Q ss_pred CCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhccc-CChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHH
Q 012492 211 PRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAV-ISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMA 289 (462)
Q Consensus 211 ~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~-~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~ 289 (462)
+..|.+++.|+...+.+.+.+++.+++.+++|+++...+... ..+...+++++++++.++++++|+....++...++.+
T Consensus 135 ~~~~~~i~~s~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a 214 (365)
T cd03807 135 SFIPLIVANSAAAAEYHQAIGYPPKKIVVIPNGVDTERFSPDLDARARLREELGLPEDTFLIGIVARLHPQKDHATLLRA 214 (365)
T ss_pred cccCeEEeccHHHHHHHHHcCCChhheeEeCCCcCHHhcCCcccchHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHH
Confidence 567888999999998888878888899999999986544332 2344566788988776655555544445566666655
Q ss_pred HHHhhhcccCCCCCceEEEEccCCH---HHHHHHh-hccCCCCeEEeccchhHHHHHHhcchheecCC----hhhHHHHH
Q 012492 290 LGESLLDKETGRPIGQLIIICGRNR---TLASTLQ-SEEWKIPVKVRGFETQMEKWMGACDCIITKAG----PGTIAEAL 361 (462)
Q Consensus 290 l~~~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~-~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg----~~t~~EAl 361 (462)
+ +.+.+. .+++++++ +|.+. ....... ++++..++.+.|..+++.++|+.||+++.++. |++++|||
T Consensus 215 ~-~~l~~~---~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~ 289 (365)
T cd03807 215 A-ALLLKK---FPNARLLL-VGDGPDRANLELLALKELGLEDKVILLGERSDVPALLNALDVFVLSSLSEGFPNVLLEAM 289 (365)
T ss_pred H-HHHHHh---CCCeEEEE-ecCCcchhHHHHHHHHhcCCCceEEEccccccHHHHHHhCCEEEeCCccccCCcHHHHHH
Confidence 5 444432 46777655 45543 2233333 56777899999999999999999999998874 78999999
Q ss_pred HhCCCEEEecCCCCccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcC-CcHHHHHHHHHHHH
Q 012492 362 IRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQ-PEAVVDIVKDIHDL 440 (462)
Q Consensus 362 a~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~-~~~~~~ia~~i~~l 440 (462)
++|+|+|+++.++ +.+.+.+.|..+...+++++++++.+++ ++++.++++++++++.+. .++++++++.+.++
T Consensus 290 a~g~PvI~~~~~~-----~~e~~~~~g~~~~~~~~~~l~~~i~~l~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 290 ACGLPVVATDVGD-----NAELVGDTGFLVPPGDPEALAEAIEALL-ADPALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred hcCCCEEEcCCCC-----hHHHhhcCCEEeCCCCHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999988643 2233444343333457999999999999 799999999999998875 68999999999887
Q ss_pred H
Q 012492 441 A 441 (462)
Q Consensus 441 ~ 441 (462)
+
T Consensus 364 y 364 (365)
T cd03807 364 Y 364 (365)
T ss_pred h
Confidence 5
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-23 Score=212.19 Aligned_cols=266 Identities=12% Similarity=0.016 Sum_probs=183.6
Q ss_pred HHHHHHHHhhCCCEEEECCcccchH--HHHHHHHcCCCCCCeEEEEecCCCCCC----------cccccCCCcEEEEcCH
Q 012492 154 KEVEAGLMEYKPDIIISVHPLMQHI--PLWVLKWQGLQKKVIFVTVITDLNTCH----------PTWFHPRVNRCYCPSK 221 (462)
Q Consensus 154 ~~l~~~l~~~kPDvVi~~~~~~~~~--~~~~~~~~~~~~~iP~v~~~~d~~~~~----------~~~~~~~~d~~i~~s~ 221 (462)
..+.+.+++.+||+|+++++..... ...+++. .++|+|...|+..... ..+..+.+|.++++|.
T Consensus 78 ~~l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~----~~~~~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~ 153 (398)
T cd03796 78 PLLRNILIRERITIVHGHQAFSALAHEALLHART----MGLKTVFTDHSLFGFADASSIHTNKLLRFSLADVDHVICVSH 153 (398)
T ss_pred HHHHHHHHhcCCCEEEECCCCchHHHHHHHHhhh----cCCcEEEEecccccccchhhHHhhHHHHHhhccCCEEEEecH
Confidence 4566778899999999998654321 1223332 4789988777642111 0123467899999999
Q ss_pred HHHHHH-HHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCC
Q 012492 222 EVAKRA-SYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETG 300 (462)
Q Consensus 222 ~~~~~l-~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~ 300 (462)
...+.+ .+.+++++++.+++|+++...+.+...+ .+++.++++++|+....++...++.++ +.+.+ .
T Consensus 154 ~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~--------~~~~~~~i~~~grl~~~Kg~~~li~a~-~~l~~---~ 221 (398)
T cd03796 154 TSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSK--------RDNDKITIVVISRLVYRKGIDLLVGII-PEICK---K 221 (398)
T ss_pred hHhhHHHHHhCCChhhEEEEcCccCHHHcCCCccc--------CCCCceEEEEEeccchhcCHHHHHHHH-HHHHh---h
Confidence 988765 3457788899999999987655431111 223445555555444445555555544 45543 2
Q ss_pred CCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC----hhhHHHHHHhCCCEEEec
Q 012492 301 RPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG----PGTIAEALIRGLPIILND 371 (462)
Q Consensus 301 ~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~ 371 (462)
.++++++++ |.+. .+.+.++++++.++|.|.|++ +++..+|+.||++|.+|. |.+++|||+||+|||+++
T Consensus 222 ~~~~~l~i~-G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~ 300 (398)
T cd03796 222 HPNVRFIIG-GDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGLLVVSTR 300 (398)
T ss_pred CCCEEEEEE-eCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCCCEEECC
Confidence 467876654 5543 356666777888899999997 689999999999998873 789999999999999998
Q ss_pred CCCCccccchHHHHHCCceee-eCCHHHHHHHHHHHhcCCHHHHHHHHHHHHh-hcCCcHHHHHHHHHHHHHhc
Q 012492 372 YIPGQEKGNVPYVVDNGAGVF-TRSPKETARIVTEWFSTKTDELKRMSENALK-LAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 372 ~~~~~~~~n~~~l~~~G~g~~-~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~-~~~~~~~~~ia~~i~~l~~~ 443 (462)
.++.. .++..|.+++ ..+++++++++.+++ +++...+.+.+++++ ..+.++++.+++.+.++.++
T Consensus 301 ~gg~~------e~i~~~~~~~~~~~~~~l~~~l~~~l-~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~ 367 (398)
T cd03796 301 VGGIP------EVLPPDMILLAEPDVESIVRKLEEAI-SILRTGKHDPWSFHNRVKKMYSWEDVAKRTEKVYDR 367 (398)
T ss_pred CCCch------hheeCCceeecCCCHHHHHHHHHHHH-hChhhhhhHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 75432 2334444443 457899999999999 566555566666655 45689999999999988754
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-22 Score=205.42 Aligned_cols=268 Identities=13% Similarity=0.096 Sum_probs=187.9
Q ss_pred HHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCc----------ccccCCCcEEEEcCHHHH
Q 012492 155 EVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHP----------TWFHPRVNRCYCPSKEVA 224 (462)
Q Consensus 155 ~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~----------~~~~~~~d~~i~~s~~~~ 224 (462)
.+.+.+++.+||+||+++.........+++ .+. .+.|.+++.|..+.... .+..+.+|.++++|+..+
T Consensus 109 ~~~~~~~~~~~diihaH~~~~~~~~~~~~~-~~~-~~~~~~~t~Hg~d~~~~~~~~~~~~~~~~~~~~ad~vv~~S~~~~ 186 (406)
T PRK15427 109 ICAQVATPFVADVFIAHFGPAGVTAAKLRE-LGV-LRGKIATIFHGIDISSREVLNHYTPEYQQLFRRGDLMLPISDLWA 186 (406)
T ss_pred HHhhhhccCCCCEEEEcCChHHHHHHHHHH-hCC-CCCCeEEEEcccccccchhhhhhhHHHHHHHHhCCEEEECCHHHH
Confidence 445667889999999988654332222222 111 23345556664321111 123356899999999999
Q ss_pred HHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCc
Q 012492 225 KRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIG 304 (462)
Q Consensus 225 ~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~ 304 (462)
+.+.+.|++++++.+++|+++...+.+.. +. .+.+...++.+|+....|+...+++++ +.+.+ +.+++
T Consensus 187 ~~l~~~g~~~~ki~vi~nGvd~~~f~~~~-~~-------~~~~~~~il~vGrl~~~Kg~~~ll~a~-~~l~~---~~~~~ 254 (406)
T PRK15427 187 GRLQKMGCPPEKIAVSRMGVDMTRFSPRP-VK-------APATPLEIISVARLTEKKGLHVAIEAC-RQLKE---QGVAF 254 (406)
T ss_pred HHHHHcCCCHHHEEEcCCCCCHHHcCCCc-cc-------cCCCCeEEEEEeCcchhcCHHHHHHHH-HHHHh---hCCCE
Confidence 99988898889999999999987654311 10 112223344444443445566666555 55554 24677
Q ss_pred eEEEEccCCH---HHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC----------hhhHHHHHHhCCCEEE
Q 012492 305 QLIIICGRNR---TLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG----------PGTIAEALIRGLPIIL 369 (462)
Q Consensus 305 ~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg----------~~t~~EAla~G~PvI~ 369 (462)
++++ +|.++ ++++.++++++.++|.|.|++ +++.++|+.||++|.+|- |++++|||++|+|||+
T Consensus 255 ~l~i-vG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~ 333 (406)
T PRK15427 255 RYRI-LGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVS 333 (406)
T ss_pred EEEE-EECchhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEE
Confidence 7655 45553 356667778888999999998 689999999999998762 6889999999999999
Q ss_pred ecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhc-CCcHHHHHHHHHHHHHhc
Q 012492 370 NDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFST-KTDELKRMSENALKLA-QPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 370 ~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~-d~~~~~~m~~~a~~~~-~~~~~~~ia~~i~~l~~~ 443 (462)
++.++. .+.+.+...|++++ |+++++++|.+++ + |++.+++|++++++.+ +.++++.+++.+.+++++
T Consensus 334 t~~~g~-----~E~v~~~~~G~lv~~~d~~~la~ai~~l~-~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 334 TLHSGI-----PELVEADKSGWLVPENDAQALAQRLAAFS-QLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred eCCCCc-----hhhhcCCCceEEeCCCCHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 986432 22333344677764 7999999999999 6 9999999999999876 578999999999998864
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-23 Score=212.75 Aligned_cols=277 Identities=12% Similarity=0.092 Sum_probs=184.6
Q ss_pred HHHHHHHHHHhh--CCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCc-----------------------
Q 012492 152 YAKEVEAGLMEY--KPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHP----------------------- 206 (462)
Q Consensus 152 ~~~~l~~~l~~~--kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~----------------------- 206 (462)
+...+.+.+++. +|||||++..........+++. .++|+|...|+......
T Consensus 100 ~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~----~~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (439)
T TIGR02472 100 LADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRL----LGVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRI 175 (439)
T ss_pred HHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHH----hCCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHH
Confidence 345666777754 7999999875433333333343 47899887775421100
Q ss_pred ---ccccCCCcEEEEcCHHHHHH-HHHc-CCCCCcEEEcCCCCChhhhcccCC---hHHH---HHHcCCCCCCcEEEEEe
Q 012492 207 ---TWFHPRVNRCYCPSKEVAKR-ASYF-GLEVSQIRVFGLPIRPSFVRAVIS---KDNL---RLELQMDPILPAVLLMG 275 (462)
Q Consensus 207 ---~~~~~~~d~~i~~s~~~~~~-l~~~-gi~~~~i~v~g~pv~~~~~~~~~~---~~~~---r~~l~l~~~~~~iLv~g 275 (462)
.+..+.+|.++++|...... +... +++++++.+++|+++.+.+.+... ...+ +++++.+++.++++.+|
T Consensus 176 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG 255 (439)
T TIGR02472 176 EAEEETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAIS 255 (439)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCCcEEEEEc
Confidence 01234678899988665433 3333 678889999999999876543211 1112 23355556666666665
Q ss_pred CCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHH---H-----------HHHHhhccCCCCeEEeccc--hhHH
Q 012492 276 GGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRT---L-----------ASTLQSEEWKIPVKVRGFE--TQME 339 (462)
Q Consensus 276 G~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~---l-----------~~~~~~~~~~~~V~~~g~~--~~~~ 339 (462)
+....|+...+++++. .+... ....++++++|+++. + .+.++++++..+|.|.|++ +++.
T Consensus 256 rl~~~Kg~~~li~A~~-~l~~~---~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~ 331 (439)
T TIGR02472 256 RPDRRKNIPSLVEAYG-RSPKL---QEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVP 331 (439)
T ss_pred CCcccCCHHHHHHHHH-hChhh---hhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHH
Confidence 5555566666666553 22111 011233444565421 1 1223456788899999975 7899
Q ss_pred HHHHhc----chheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeee--CCHHHHHHHHHHHhcC
Q 012492 340 KWMGAC----DCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFT--RSPKETARIVTEWFST 409 (462)
Q Consensus 340 ~l~~~a----D~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~--~~~~~la~~i~~ll~~ 409 (462)
++|+.| |++|++|. |++++|||+||+|+|+++.++. .+.+.+...|+++ .|+++++++|.+++ +
T Consensus 332 ~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~-----~eiv~~~~~G~lv~~~d~~~la~~i~~ll-~ 405 (439)
T TIGR02472 332 ELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGP-----RDIIANCRNGLLVDVLDLEAIASALEDAL-S 405 (439)
T ss_pred HHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCc-----HHHhcCCCcEEEeCCCCHHHHHHHHHHHH-h
Confidence 999987 89998873 8999999999999999987432 2234333467776 47999999999999 7
Q ss_pred CHHHHHHHHHHHHhhc-CCcHHHHHHHHHHHHHh
Q 012492 410 KTDELKRMSENALKLA-QPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 410 d~~~~~~m~~~a~~~~-~~~~~~~ia~~i~~l~~ 442 (462)
|++.+++|++++++.+ +.++|+.+++.++++++
T Consensus 406 ~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 406 DSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999998875 67999999999998874
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.4e-23 Score=204.40 Aligned_cols=271 Identities=16% Similarity=0.145 Sum_probs=188.1
Q ss_pred HHHHHHHHHHhhCCCEEEECCcccchHH-HHHHHHcCCCCCCeEEEEecCCCC--CC---c----c-cccCCCcEEEEcC
Q 012492 152 YAKEVEAGLMEYKPDIIISVHPLMQHIP-LWVLKWQGLQKKVIFVTVITDLNT--CH---P----T-WFHPRVNRCYCPS 220 (462)
Q Consensus 152 ~~~~l~~~l~~~kPDvVi~~~~~~~~~~-~~~~~~~~~~~~iP~v~~~~d~~~--~~---~----~-~~~~~~d~~i~~s 220 (462)
...++.+++++++||+|++++....... ..+++. .++|++++.....+ .. + + +..+.+|.++++|
T Consensus 74 ~~~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~----~~ipv~h~~~g~~s~~~~~~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 74 MLEGLEELLLEEKPDIVLVQGDTTTTLAGALAAFY----LQIPVGHVEAGLRTGDRYSPMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHH----hCCCEEEEeCCCCcCCCCCCCccHHHHHHHHHHHHhccCCC
Confidence 3467888999999999999986554332 233333 48999866432211 11 1 1 1234578999999
Q ss_pred HHHHHHHHHcCCCCCcEEEcCCCCChhhhcc-c-CChHHHHHHcCCCCCCcEEEEEeCCCCC--ccHHHHHHHHHHhhhc
Q 012492 221 KEVAKRASYFGLEVSQIRVFGLPIRPSFVRA-V-ISKDNLRLELQMDPILPAVLLMGGGEGM--GPVKETAMALGESLLD 296 (462)
Q Consensus 221 ~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~-~-~~~~~~r~~l~l~~~~~~iLv~gG~~~~--~~~~~~l~~l~~~l~~ 296 (462)
+..++.+.+.|+++++|.++||++.+.+... . ..+..++++++. +.++++++++.... ++...+++++ +.+.+
T Consensus 150 ~~~~~~l~~~G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~~--~~~~vl~~~hr~~~~~k~~~~ll~a~-~~l~~ 226 (365)
T TIGR00236 150 EQAKDNLLRENVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFGE--DKRYILLTLHRRENVGEPLENIFKAI-REIVE 226 (365)
T ss_pred HHHHHHHHHcCCCcccEEEeCChHHHHHHHHHhhccchhHHHhcCC--CCCEEEEecCchhhhhhHHHHHHHHH-HHHHH
Confidence 9999999999999999999999974433221 1 123456666763 34577777765432 3344445444 34432
Q ss_pred ccCCCCCceEEEEccCCHHHHHHHh-hccCCCCeEEeccc--hhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCC
Q 012492 297 KETGRPIGQLIIICGRNRTLASTLQ-SEEWKIPVKVRGFE--TQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYI 373 (462)
Q Consensus 297 ~~~~~~~~~~lvv~G~~~~l~~~~~-~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~ 373 (462)
+.|+++++++++++......+. .++..++|.+.|.. .++..+|+.||++|++||+. +.||+++|+|+|+++..
T Consensus 227 ---~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~Sg~~-~~EA~a~g~PvI~~~~~ 302 (365)
T TIGR00236 227 ---EFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDSGGV-QEEAPSLGKPVLVLRDT 302 (365)
T ss_pred ---HCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECChhH-HHHHHHcCCCEEECCCC
Confidence 2467777666565544333332 23555789999876 46778999999999999765 69999999999998644
Q ss_pred CCccccchHHHHHCCceeee-CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHH
Q 012492 374 PGQEKGNVPYVVDNGAGVFT-RSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHD 439 (462)
Q Consensus 374 ~~~~~~n~~~l~~~G~g~~~-~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~ 439 (462)
++.+ .+.+.|.++++ .+++++++++.+++ +|++.+++|+++...+.+..++++|++.+++
T Consensus 303 ~~~~-----e~~~~g~~~lv~~d~~~i~~ai~~ll-~~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 303 TERP-----ETVEAGTNKLVGTDKENITKAAKRLL-TDPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred CCCh-----HHHhcCceEEeCCCHHHHHHHHHHHH-hChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 4333 24557777666 48999999999999 7999999999888778888899999998876
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-22 Score=202.43 Aligned_cols=333 Identities=15% Similarity=0.143 Sum_probs=206.4
Q ss_pred CeEEEEecC---CCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcch
Q 012492 63 KNVLILMSD---TGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKW 139 (462)
Q Consensus 63 ~kIli~~~~---~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 139 (462)
|||++++.. . ||-.+....++++|.++|+ ++++++... +.... ..+......... +... .
T Consensus 1 mkI~~~~~~~~~~-GG~e~~~~~l~~~L~~~~~-g~~v~v~~~-----~~~~~---~~~~~~~~~~~~----~~~~---~ 63 (359)
T PRK09922 1 MKIAFIGEAVSGF-GGMETVISNVINTFEESKI-NCEMFFFCR-----NDKMD---KAWLKEIKYAQS----FSNI---K 63 (359)
T ss_pred CeeEEecccccCC-CchhHHHHHHHHHhhhcCc-ceeEEEEec-----CCCCC---hHHHHhcchhcc----cccc---h
Confidence 799999753 4 5999999999999999843 246665421 11100 001000000000 0000 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC--CCcc-cccCCCcEE
Q 012492 140 IHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT--CHPT-WFHPRVNRC 216 (462)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~--~~~~-~~~~~~d~~ 216 (462)
+. +. .......++.+.+++++||+|+++.+........+.+..+ ...+++.+.|.... .+.. .....+|.+
T Consensus 64 ~~--~~--~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~--~~~~~~~~~h~~~~~~~~~~~~~~~~~d~~ 137 (359)
T PRK09922 64 LS--FL--RRAKHVYNFSKWLKETQPDIVICIDVISCLYANKARKKSG--KQFKIFSWPHFSLDHKKHAECKKITCADYH 137 (359)
T ss_pred hh--hh--cccHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHHHHhC--CCCeEEEEecCcccccchhhhhhhhcCCEE
Confidence 00 00 0012235667889999999999988654333222333322 24455554442110 0001 113578999
Q ss_pred EEcCHHHHHHHHHcCCCCCcEEEcCCCCChh-hhcccCChHHHHHHcCCCCCCcEEEEEeCCC--CCccHHHHHHHHHHh
Q 012492 217 YCPSKEVAKRASYFGLEVSQIRVFGLPIRPS-FVRAVISKDNLRLELQMDPILPAVLLMGGGE--GMGPVKETAMALGES 293 (462)
Q Consensus 217 i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~-~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~--~~~~~~~~l~~l~~~ 293 (462)
+++|+..++.+.+.|++.+++.+++|+++.. +..+ .+. ..+.++++++|+.. +.++...+++++. .
T Consensus 138 i~~S~~~~~~~~~~~~~~~ki~vi~N~id~~~~~~~--~~~--------~~~~~~i~~~Grl~~~~~k~~~~l~~a~~-~ 206 (359)
T PRK09922 138 LAISSGIKEQMMARGISAQRISVIYNPVEIKTIIIP--PPE--------RDKPAVFLYVGRLKFEGQKNVKELFDGLS-Q 206 (359)
T ss_pred EEcCHHHHHHHHHcCCCHHHEEEEcCCCCHHHccCC--Ccc--------cCCCcEEEEEEEEecccCcCHHHHHHHHH-h
Confidence 9999999999988898888999999999843 3221 110 12345566666432 3466666666553 3
Q ss_pred hhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccch----hHHHHHHhcchheecCC----hhhHHHHHH
Q 012492 294 LLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFET----QMEKWMGACDCIITKAG----PGTIAEALI 362 (462)
Q Consensus 294 l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~~----~~~~l~~~aD~vV~~sg----~~t~~EAla 362 (462)
+. ++++++++ |.+. .+.+.++++++..+|+|.|+++ ++.++|+.||++|.+|. |.+++|||+
T Consensus 207 ~~------~~~~l~iv-G~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma 279 (359)
T PRK09922 207 TT------GEWQLHII-GDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMS 279 (359)
T ss_pred hC------CCeEEEEE-eCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHH
Confidence 32 35666554 4443 3566667778888999999974 46677888999998874 999999999
Q ss_pred hCCCEEEecCCCCccccchHHHHHCC-ceeee--CCHHHHHHHHHHHhcCCHH--HHHHHHHHHHhhcCCcHHHHHHHHH
Q 012492 363 RGLPIILNDYIPGQEKGNVPYVVDNG-AGVFT--RSPKETARIVTEWFSTKTD--ELKRMSENALKLAQPEAVVDIVKDI 437 (462)
Q Consensus 363 ~G~PvI~~~~~~~~~~~n~~~l~~~G-~g~~~--~~~~~la~~i~~ll~~d~~--~~~~m~~~a~~~~~~~~~~~ia~~i 437 (462)
||+|+|++++.++. ..++..| .|+++ .|+++++++|.+++ +|++ ....++++++++.......++++.+
T Consensus 280 ~G~Pvv~s~~~~g~-----~eiv~~~~~G~lv~~~d~~~la~~i~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (359)
T PRK09922 280 YGIPCISSDCMSGP-----RDIIKPGLNGELYTPGNIDEFVGKLNKVI-SGEVKYQHDAIPNSIERFYEVLYFKNLNNAL 353 (359)
T ss_pred cCCCEEEeCCCCCh-----HHHccCCCceEEECCCCHHHHHHHHHHHH-hCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999999843332 2344444 57665 47999999999999 6887 4566677777776666666666666
Q ss_pred HHHHh
Q 012492 438 HDLAA 442 (462)
Q Consensus 438 ~~l~~ 442 (462)
.++++
T Consensus 354 ~~~~~ 358 (359)
T PRK09922 354 FSKLQ 358 (359)
T ss_pred HHHhc
Confidence 66554
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-22 Score=203.79 Aligned_cols=265 Identities=13% Similarity=0.082 Sum_probs=185.9
Q ss_pred HhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCc-----------------ccccCCCcEEEEcCHHH
Q 012492 161 MEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHP-----------------TWFHPRVNRCYCPSKEV 223 (462)
Q Consensus 161 ~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~-----------------~~~~~~~d~~i~~s~~~ 223 (462)
+..+||+||+++.+.......+++. .++|+|...|+.....+ .+..+.+|.++++|+..
T Consensus 80 ~~~~~divh~~~~~~~~~~~~~~~~----~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~ 155 (388)
T TIGR02149 80 DPVDADVVHSHTWYTFLAGHLAKKL----YDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGM 155 (388)
T ss_pred CCCCCCeEeecchhhhhHHHHHHHh----cCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHH
Confidence 3457999999876554332223332 48999988887532100 01234679999999999
Q ss_pred HHHHHHc--CCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCC
Q 012492 224 AKRASYF--GLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGR 301 (462)
Q Consensus 224 ~~~l~~~--gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~ 301 (462)
++.+.+. +++..++.+++|+++...+.+ ..+...+++++++++.++++++|+....++...++.++ +.+.
T Consensus 156 ~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~li~a~-~~l~------ 227 (388)
T TIGR02149 156 REDILKYYPDLDPEKVHVIYNGIDTKEYKP-DDGNVVLDRYGIDRSRPYILFVGRITRQKGVPHLLDAV-HYIP------ 227 (388)
T ss_pred HHHHHHHcCCCCcceEEEecCCCChhhcCC-CchHHHHHHhCCCCCceEEEEEcccccccCHHHHHHHH-HHHh------
Confidence 8888764 567788999999998876654 34566788899987777776666555556666666554 4443
Q ss_pred CCceEEEEccCCH--HH----HHHHhhccC-CCCeEEe-ccc--hhHHHHHHhcchheecCC----hhhHHHHHHhCCCE
Q 012492 302 PIGQLIIICGRNR--TL----ASTLQSEEW-KIPVKVR-GFE--TQMEKWMGACDCIITKAG----PGTIAEALIRGLPI 367 (462)
Q Consensus 302 ~~~~~lvv~G~~~--~l----~~~~~~~~~-~~~V~~~-g~~--~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~Pv 367 (462)
+++++++++|... ++ ++.+.+++. ..++.++ |++ +++.++|+.||++|.+|. |.+++|||++|+|+
T Consensus 228 ~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~Pv 307 (388)
T TIGR02149 228 KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPV 307 (388)
T ss_pred hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCE
Confidence 2456655544321 22 333333333 3457765 444 689999999999998863 88999999999999
Q ss_pred EEecCCCCccccchHHHHHCCceeeeC--CH------HHHHHHHHHHhcCCHHHHHHHHHHHHhhc-CCcHHHHHHHHHH
Q 012492 368 ILNDYIPGQEKGNVPYVVDNGAGVFTR--SP------KETARIVTEWFSTKTDELKRMSENALKLA-QPEAVVDIVKDIH 438 (462)
Q Consensus 368 I~~~~~~~~~~~n~~~l~~~G~g~~~~--~~------~~la~~i~~ll~~d~~~~~~m~~~a~~~~-~~~~~~~ia~~i~ 438 (462)
|+++.++ ..+.+.+.+.|++++ ++ ++++++|.+++ +|++.+++|++++++.+ +.++|+.+++.+.
T Consensus 308 I~s~~~~-----~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~-~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 381 (388)
T TIGR02149 308 VASATGG-----IPEVVVDGETGFLVPPDNSDADGFQAELAKAINILL-ADPELAKKMGIAGRKRAEEEFSWGSIAKKTV 381 (388)
T ss_pred EEeCCCC-----HHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9998643 222344444677765 45 78999999999 79999999999999876 5799999999999
Q ss_pred HHHhc
Q 012492 439 DLAAQ 443 (462)
Q Consensus 439 ~l~~~ 443 (462)
++.++
T Consensus 382 ~~y~~ 386 (388)
T TIGR02149 382 EMYRK 386 (388)
T ss_pred HHHHh
Confidence 88763
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-22 Score=210.70 Aligned_cols=278 Identities=10% Similarity=0.039 Sum_probs=186.9
Q ss_pred HHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEe-cCCCCC-Cc-cc------c-----cCCCcE
Q 012492 150 AYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVI-TDLNTC-HP-TW------F-----HPRVNR 215 (462)
Q Consensus 150 ~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~-~d~~~~-~~-~~------~-----~~~~d~ 215 (462)
....+++.+++++++|||||++..........+++. .++|+|.+. |..... .+ .| + ....+.
T Consensus 386 ~~~~~~L~~~lk~~kpDIVH~h~~~a~~lg~lAa~~----~gvPvIv~t~h~~~~~~~~~~~~~~~~~l~~~l~~~~~~i 461 (694)
T PRK15179 386 IEGTTKLTDVMRSSVPSVVHIWQDGSIFACALAALL----AGVPRIVLSVRTMPPVDRPDRYRVEYDIIYSELLKMRGVA 461 (694)
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHH----cCCCEEEEEeCCCccccchhHHHHHHHHHHHHHHhcCCeE
Confidence 345678889999999999999886654443344443 378876533 332110 00 11 0 112345
Q ss_pred EEEcCHHHHHHHHH-cCCCCCcEEEcCCCCChhhhcccCChHHHHHH--cCCCCCCcEEEEEeCCCCCccHHHHHHHHHH
Q 012492 216 CYCPSKEVAKRASY-FGLEVSQIRVFGLPIRPSFVRAVISKDNLRLE--LQMDPILPAVLLMGGGEGMGPVKETAMALGE 292 (462)
Q Consensus 216 ~i~~s~~~~~~l~~-~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~--l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~ 292 (462)
+++.|...++.+.+ .+++.+++.+++|+++...+.+.......+.+ ...+++.++|+.+|+....|+...++.++.+
T Consensus 462 ~Vs~S~~~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~ 541 (694)
T PRK15179 462 LSSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQR 541 (694)
T ss_pred EEeCcHHHHHHHHHHcCCChhHEEEECCCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHH
Confidence 66778877777765 58888899999999987654421111111122 2234445556666655555666666666544
Q ss_pred hhhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCC----hhhHHHHHHhCC
Q 012492 293 SLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAG----PGTIAEALIRGL 365 (462)
Q Consensus 293 ~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~ 365 (462)
.+.+ .|+++++++ |.+. ++++.++++++.++|.|.|+.+++..+|+.||++|.+|. |++++|||++|+
T Consensus 542 l~~~----~p~~~LvIv-G~G~~~~~L~~l~~~lgL~~~V~flG~~~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~ 616 (694)
T PRK15179 542 FAAS----HPKVRFIMV-GGGPLLESVREFAQRLGMGERILFTGLSRRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGV 616 (694)
T ss_pred HHHH----CcCeEEEEE-ccCcchHHHHHHHHHcCCCCcEEEcCCcchHHHHHHhcCEEEeccccccchHHHHHHHHcCC
Confidence 3332 577876654 4443 366777778889999999999999999999999998763 899999999999
Q ss_pred CEEEecCCCCccccchHHHHHCCceeeeC--C--HHHHHHHHHHHhcCCHHHHHHHHHHHHhhc-CCcHHHHHHHHHHHH
Q 012492 366 PIILNDYIPGQEKGNVPYVVDNGAGVFTR--S--PKETARIVTEWFSTKTDELKRMSENALKLA-QPEAVVDIVKDIHDL 440 (462)
Q Consensus 366 PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~--~~~la~~i~~ll~~d~~~~~~m~~~a~~~~-~~~~~~~ia~~i~~l 440 (462)
|||+++.++ ..+.+.+...|++++ | ++++++++.+++ .+......|++++++.+ +.|+++.+++.+.++
T Consensus 617 PVVat~~gG-----~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll-~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 617 PVVTTLAGG-----AGEAVQEGVTGLTLPADTVTAPDVAEALARIH-DMCAADPGIARKAADWASARFSLNQMIASTVRC 690 (694)
T ss_pred eEEEECCCC-----hHHHccCCCCEEEeCCCCCChHHHHHHHHHHH-hChhccHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999998743 222333444688875 3 457888888877 45555566778888776 589999999999987
Q ss_pred Hh
Q 012492 441 AA 442 (462)
Q Consensus 441 ~~ 442 (462)
.+
T Consensus 691 Y~ 692 (694)
T PRK15179 691 YQ 692 (694)
T ss_pred hC
Confidence 64
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.6e-22 Score=197.18 Aligned_cols=264 Identities=17% Similarity=0.131 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHhhCCCEEEECCcccchHHHH-HHHHcCCCCCCeEEEEecCCCCC--CcccccCCCcEEEEcCHHHHHHH
Q 012492 151 YYAKEVEAGLMEYKPDIIISVHPLMQHIPLW-VLKWQGLQKKVIFVTVITDLNTC--HPTWFHPRVNRCYCPSKEVAKRA 227 (462)
Q Consensus 151 ~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~-~~~~~~~~~~iP~v~~~~d~~~~--~~~~~~~~~d~~i~~s~~~~~~l 227 (462)
.....+.+++++.+||+|+++++......++ .++. .++|+|...||.... ...+.....|.++++|+...+.+
T Consensus 83 ~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~----~~~~~i~~~hd~~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 158 (359)
T cd03823 83 AVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAARD----RGIPIVLTLHDYWLICPRQGLFKKGGDAVIAPSRFLLDRY 158 (359)
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHHHHHHHh----cCCCEEEEEeeeeeecchhhhhccCCCEEEEeCHHHHHHH
Confidence 3455677889999999999988643332222 2232 379999888886421 12233344599999999999998
Q ss_pred HHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEE
Q 012492 228 SYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLI 307 (462)
Q Consensus 228 ~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~l 307 (462)
.+.+.++.++.+++|+++........ + +.+.+.+.++++|+....++...++.. ++.+.+ ++++++
T Consensus 159 ~~~~~~~~~~~vi~n~~~~~~~~~~~-~-------~~~~~~~~i~~~G~~~~~k~~~~li~~-~~~l~~-----~~~~l~ 224 (359)
T cd03823 159 VANGLFAEKISVIRNGIDLDRAKRPR-R-------APPGGRLRFGFIGQLTPHKGVDLLLEA-FKRLPR-----GDIELV 224 (359)
T ss_pred HHcCCCccceEEecCCcChhhccccc-c-------CCCCCceEEEEEecCccccCHHHHHHH-HHHHHh-----cCcEEE
Confidence 88877667899999999876654311 1 233444555555544444555544444 445542 356655
Q ss_pred EEccCCHHHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecC-----ChhhHHHHHHhCCCEEEecCCCCccccc
Q 012492 308 IICGRNRTLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKA-----GPGTIAEALIRGLPIILNDYIPGQEKGN 380 (462)
Q Consensus 308 vv~G~~~~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~s-----g~~t~~EAla~G~PvI~~~~~~~~~~~n 380 (462)
+ +|.+..........+...+|.+.|++ +++.++|+.||+++++| .|.+++|||++|+|+|+++.++ .
T Consensus 225 i-~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~-----~ 298 (359)
T cd03823 225 I-VGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGG-----M 298 (359)
T ss_pred E-EcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCCC-----H
Confidence 4 56554211111111456789999998 89999999999999765 3789999999999999988643 2
Q ss_pred hHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHh
Q 012492 381 VPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 381 ~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~ 442 (462)
.+.+.+.+.|+.+. |.+++++++.+++ +|++.+++|++++++.... +.+++.++++++
T Consensus 299 ~e~i~~~~~g~~~~~~d~~~l~~~i~~l~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 358 (359)
T cd03823 299 AELVRDGVNGLLFPPGDAEDLAAALERLI-DDPDLLERLRAGIEPPRSI---EDQAEEYLKLYR 358 (359)
T ss_pred HHHhcCCCcEEEECCCCHHHHHHHHHHHH-hChHHHHHHHHhHHHhhhH---HHHHHHHHHHhh
Confidence 33444444677664 5899999999999 7999999999998876654 888888888764
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-22 Score=201.46 Aligned_cols=265 Identities=13% Similarity=0.090 Sum_probs=180.9
Q ss_pred HHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC--c-----ccccCCCcEEEEcCHHHHHHHHHcC
Q 012492 159 GLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH--P-----TWFHPRVNRCYCPSKEVAKRASYFG 231 (462)
Q Consensus 159 ~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~--~-----~~~~~~~d~~i~~s~~~~~~l~~~g 231 (462)
.+.+.+||+|+++.+..... ..++.. .++|+|...|...... . .++...+|.+++.+. .+...+
T Consensus 80 ~~~~~~~Dvv~~h~~~~~~~--~~~~~~---~~~~~i~~~H~~~~~~~~~~~~~~~~~~~~~d~~i~~~~----~~~~~~ 150 (372)
T cd03792 80 PLLDLDADVVVIHDPQPLAL--PLFKKK---RGRPWIWRCHIDLSSPNRRVWDFLQPYIEDYDAAVFHLP----EYVPPQ 150 (372)
T ss_pred ccccCCCCEEEECCCCchhH--HHhhhc---CCCeEEEEeeeecCCCcHHHHHHHHHHHHhCCEEeecHH----HhcCCC
Confidence 35678999999988764332 222221 3788876665322111 0 112345788887773 233446
Q ss_pred CCCCcEEEcCCCCChhh-hcccC---ChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEE
Q 012492 232 LEVSQIRVFGLPIRPSF-VRAVI---SKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLI 307 (462)
Q Consensus 232 i~~~~i~v~g~pv~~~~-~~~~~---~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~l 307 (462)
++..++ +++|++++.. ..... ....+++++++++++++++.+|+....|+...+++++ +.+.+ ..++++++
T Consensus 151 ~~~~~~-vipngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~-~~l~~---~~~~~~l~ 225 (372)
T cd03792 151 VPPRKV-IIPPSIDPLSGKNRELSPADIEYILEKYGIDPERPYITQVSRFDPWKDPFGVIDAY-RKVKE---RVPDPQLV 225 (372)
T ss_pred CCCceE-EeCCCCCCCccccCCCCHHHHHHHHHHhCCCCCCcEEEEEeccccccCcHHHHHHH-HHHHh---hCCCCEEE
Confidence 666656 8999998642 11111 2345778899988888777766555556666666555 44443 13677766
Q ss_pred EEccCCH------HHHHHHh-hccCCCCeEEeccc----hhHHHHHHhcchheecCC----hhhHHHHHHhCCCEEEecC
Q 012492 308 IICGRNR------TLASTLQ-SEEWKIPVKVRGFE----TQMEKWMGACDCIITKAG----PGTIAEALIRGLPIILNDY 372 (462)
Q Consensus 308 vv~G~~~------~l~~~~~-~~~~~~~V~~~g~~----~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~ 372 (462)
++++... ++.+.+. ..+..+++.+.|+. +++..+|+.||+++.+|. |++++|||++|+|+|+++.
T Consensus 226 i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~ 305 (372)
T cd03792 226 LVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPV 305 (372)
T ss_pred EEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCC
Confidence 5443221 1222322 35667789999876 688899999999998874 8999999999999999986
Q ss_pred CCCccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc-CCcHHHHHHHHHHHHHhc
Q 012492 373 IPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLA-QPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 373 ~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~-~~~~~~~ia~~i~~l~~~ 443 (462)
++. .+.+.+...|+.+++++.++++|.+++ +|++.+++|++++++.+ +.++|+.+++.+.+++++
T Consensus 306 ~~~-----~~~i~~~~~g~~~~~~~~~a~~i~~ll-~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 306 GGI-----PLQIEDGETGFLVDTVEEAAVRILYLL-RDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred CCc-----hhhcccCCceEEeCCcHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 432 233445557888888899999999999 79999999999999976 579999999999998764
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-22 Score=201.99 Aligned_cols=260 Identities=17% Similarity=0.175 Sum_probs=188.3
Q ss_pred HHHHHHHhh--CCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEe-cCCCCC------------------C-------c
Q 012492 155 EVEAGLMEY--KPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVI-TDLNTC------------------H-------P 206 (462)
Q Consensus 155 ~l~~~l~~~--kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~-~d~~~~------------------~-------~ 206 (462)
+-.+.++++ +||+|++++.+. ++.+|+. .++|++.+. |+.+.. . .
T Consensus 82 ~~~~~~~~~~~~p~~v~~~Gg~v---~~~aA~~----~~~p~~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~p~e~n 154 (396)
T TIGR03492 82 GQWRALRKWAKKGDLIVAVGDIV---PLLFAWL----SGKPYAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPWERW 154 (396)
T ss_pred HHHHHHHHHhhcCCEEEEECcHH---HHHHHHH----cCCCceEEEeeccceeecCCCCCccchhhhccCCCccCHHHHH
Confidence 445678999 999999999987 3556654 488987633 333211 1 1
Q ss_pred ccccCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHH-
Q 012492 207 TWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKE- 285 (462)
Q Consensus 207 ~~~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~- 285 (462)
.+..+.++.+++.++...+.+.+.|+ ++.++|||+.+.+... .+. +++++.+++++++|+.+.+....
T Consensus 155 ~l~~~~a~~v~~~~~~t~~~l~~~g~---k~~~vGnPv~d~l~~~--~~~------~l~~~~~~lllLpGSR~ae~~~~l 223 (396)
T TIGR03492 155 LMRSRRCLAVFVRDRLTARDLRRQGV---RASYLGNPMMDGLEPP--ERK------PLLTGRFRIALLPGSRPPEAYRNL 223 (396)
T ss_pred HhhchhhCEEeCCCHHHHHHHHHCCC---eEEEeCcCHHhcCccc--ccc------ccCCCCCEEEEECCCCHHHHHccH
Confidence 23346788999999999988887776 7999999998876532 111 56667788999999998754433
Q ss_pred -HHHHHHHhhhcccCCCCCceEEEEc-cCCH--HHHHHHhhccCC--------------CCeEEeccchhHHHHHHhcch
Q 012492 286 -TAMALGESLLDKETGRPIGQLIIIC-GRNR--TLASTLQSEEWK--------------IPVKVRGFETQMEKWMGACDC 347 (462)
Q Consensus 286 -~l~~l~~~l~~~~~~~~~~~~lvv~-G~~~--~l~~~~~~~~~~--------------~~V~~~g~~~~~~~l~~~aD~ 347 (462)
.+.++++.+.+ .+++++++.+ |... .+.+.+++.++. .++.+..+.++|.++|++||+
T Consensus 224 p~~l~al~~L~~----~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADl 299 (396)
T TIGR03492 224 KLLLRALEALPD----SQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADL 299 (396)
T ss_pred HHHHHHHHHHhh----CCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCCE
Confidence 44444455543 1567787777 5442 344445443432 236777788899999999999
Q ss_pred heecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHC----Cceeee-C-CHHHHHHHHHHHhcCCHHHHHHHHH-H
Q 012492 348 IITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDN----GAGVFT-R-SPKETARIVTEWFSTKTDELKRMSE-N 420 (462)
Q Consensus 348 vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~----G~g~~~-~-~~~~la~~i~~ll~~d~~~~~~m~~-~ 420 (462)
+|++||+.| .|++++|+|+|+.|... +|. |+..+... |..+.+ . +++.+++.+.+++ +|++.+++|.+ .
T Consensus 300 vI~rSGt~T-~E~a~lg~P~Ilip~~~-~q~-na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll-~d~~~~~~~~~~~ 375 (396)
T TIGR03492 300 GIAMAGTAT-EQAVGLGKPVIQLPGKG-PQF-TYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLL-ADPELLERCRRNG 375 (396)
T ss_pred EEECcCHHH-HHHHHhCCCEEEEeCCC-CHH-HHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHH-cCHHHHHHHHHHH
Confidence 999999877 99999999999999754 455 88777763 554444 3 4789999999999 79999999984 4
Q ss_pred HHhhcCCcHHHHHHHHHHHH
Q 012492 421 ALKLAQPEAVVDIVKDIHDL 440 (462)
Q Consensus 421 a~~~~~~~~~~~ia~~i~~l 440 (462)
.+++.+++++++|++.+.++
T Consensus 376 ~~~lg~~~a~~~ia~~i~~~ 395 (396)
T TIGR03492 376 QERMGPPGASARIAESILKQ 395 (396)
T ss_pred HHhcCCCCHHHHHHHHHHHh
Confidence 45667889999999988775
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-22 Score=201.38 Aligned_cols=277 Identities=12% Similarity=0.070 Sum_probs=190.5
Q ss_pred HHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEE-ecCCCCCC------cc--------cccCCCcEE
Q 012492 152 YAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTV-ITDLNTCH------PT--------WFHPRVNRC 216 (462)
Q Consensus 152 ~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~-~~d~~~~~------~~--------~~~~~~d~~ 216 (462)
-...+..++++.+||+||++....+.....+++. .++|++.. .|.+.... .. +..+.+| +
T Consensus 268 ~~~~l~~~ir~~rpDIVHt~~~~a~l~g~laA~l----agvpviv~~~h~~~~~~~~r~~~~e~~~~~~a~~i~~~sd-~ 342 (578)
T PRK15490 268 GIKHLVPHLCERKLDYLSVWQDGACLMIALAALI----AGVPRIQLGLRGLPPVVRKRLFKPEYEPLYQALAVVPGVD-F 342 (578)
T ss_pred HHHHHHHHHHHcCCCEEEEcCcccHHHHHHHHHh----cCCCEEEEeecccCCcchhhHHHHHHHHhhhhceeEecch-h
Confidence 3457778999999999999886654433334443 37888543 23211000 00 1122334 5
Q ss_pred EEcCHHHHHHHHH-cCCCCCcEEEcCCCCChhhhcccCC-hHHHHHH--cCCCCCCcEEEEEeCCCCCccHHHHHHHHHH
Q 012492 217 YCPSKEVAKRASY-FGLEVSQIRVFGLPIRPSFVRAVIS-KDNLRLE--LQMDPILPAVLLMGGGEGMGPVKETAMALGE 292 (462)
Q Consensus 217 i~~s~~~~~~l~~-~gi~~~~i~v~g~pv~~~~~~~~~~-~~~~r~~--l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~ 292 (462)
++.+...++.+.+ .++|++++.+++|+++...+.+..+ +...+.. .+++++.++++.+|...+.++...++.++.+
T Consensus 343 v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~ 422 (578)
T PRK15490 343 MSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAAR 422 (578)
T ss_pred hhccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHH
Confidence 6677777777765 4889999999999998765443211 1123332 3445556666677776777777777776655
Q ss_pred hhhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCC----hhhHHHHHHhCC
Q 012492 293 SLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAG----PGTIAEALIRGL 365 (462)
Q Consensus 293 ~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~ 365 (462)
.+.+ .|++++++ +|++. ++.+.++++++.++|+|.|+.+++.++|+.||++|.+|. |++++|||++|+
T Consensus 423 llk~----~pdirLvI-VGdG~~~eeLk~la~elgL~d~V~FlG~~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl 497 (578)
T PRK15490 423 YLQH----HPATRFVL-VGDGDLRAEAQKRAEQLGILERILFVGASRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV 497 (578)
T ss_pred HHhH----CCCeEEEE-EeCchhHHHHHHHHHHcCCCCcEEECCChhhHHHHHHhCCEEEEcccccCccHHHHHHHHhCC
Confidence 4443 47787655 45554 355667778888999999999999999999999998863 899999999999
Q ss_pred CEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHH---HHHhcCCHHHHHHHHHHHHhhc-CCcHHHHHHHHHHH
Q 012492 366 PIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIV---TEWFSTKTDELKRMSENALKLA-QPEAVVDIVKDIHD 439 (462)
Q Consensus 366 PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i---~~ll~~d~~~~~~m~~~a~~~~-~~~~~~~ia~~i~~ 439 (462)
|||+++.++ +.+.+.+...|++++ |++.+++++ ..+. .+.+.+..|++++++++ +.|+++.+++.+.+
T Consensus 498 PVVATdvGG-----~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~-~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~k 571 (578)
T PRK15490 498 PVISTPAGG-----SAECFIEGVSGFILDDAQTVNLDQACRYAEKLV-NLWRSRTGICQQTQSFLQERFTVEHMVGTFVK 571 (578)
T ss_pred CEEEeCCCC-----cHHHcccCCcEEEECCCChhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 999998743 333455555788875 455666655 3444 45556778999999987 56999999999999
Q ss_pred HHhcc
Q 012492 440 LAAQR 444 (462)
Q Consensus 440 l~~~~ 444 (462)
++..+
T Consensus 572 i~~~~ 576 (578)
T PRK15490 572 TIASQ 576 (578)
T ss_pred HHHhc
Confidence 88754
|
|
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-22 Score=201.10 Aligned_cols=265 Identities=18% Similarity=0.245 Sum_probs=183.7
Q ss_pred HHHHHHHHhhCCCEEEECCcccchH-HHHHHHHcCCCCCCeEEEEecCCCCCC----------------cccccCCCcEE
Q 012492 154 KEVEAGLMEYKPDIIISVHPLMQHI-PLWVLKWQGLQKKVIFVTVITDLNTCH----------------PTWFHPRVNRC 216 (462)
Q Consensus 154 ~~l~~~l~~~kPDvVi~~~~~~~~~-~~~~~~~~~~~~~iP~v~~~~d~~~~~----------------~~~~~~~~d~~ 216 (462)
..+.+.+++++||+|+++.+..... ...+++. .++|++...|+..... ..++.+.+|.+
T Consensus 73 ~~~~~~~~~~~pdii~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 148 (364)
T cd03814 73 RRVRRLLDAFAPDVVHIATPGPLGLAALRAARR----LGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRV 148 (364)
T ss_pred hhHHHHHHhcCCCEEEEeccchhhHHHHHHHHH----cCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEE
Confidence 3456678999999999876543322 2223332 4899988777642100 01234568999
Q ss_pred EEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCC-CccHHHHHHHHHHhhh
Q 012492 217 YCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEG-MGPVKETAMALGESLL 295 (462)
Q Consensus 217 i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~-~~~~~~~l~~l~~~l~ 295 (462)
+++|+...+.+.+.+. .++.+++++++...+.+.......+.+++ +.+.+.+ ++.|+.. .++...++. +++.+.
T Consensus 149 ~~~s~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~i-~~~G~~~~~k~~~~~i~-~~~~l~ 223 (364)
T cd03814 149 LVPSPSLADELRARGF--RRVRLWPRGVDTELFHPRRRDEALRARLG-PPDRPVL-LYVGRLAPEKNLEALLD-ADLPLR 223 (364)
T ss_pred EeCCHHHHHHHhccCC--CceeecCCCccccccCcccccHHHHHHhC-CCCCeEE-EEEeccccccCHHHHHH-HHHHhh
Confidence 9999999886554443 57889999998766554333344455565 3344444 4445554 444544444 445554
Q ss_pred cccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC----hhhHHHHHHhCCCEEE
Q 012492 296 DKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG----PGTIAEALIRGLPIIL 369 (462)
Q Consensus 296 ~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~ 369 (462)
+ . ++++++ ++|.+.. ...++ +...+|.+.|++ +++.++|+.||+++.++. |++++|||++|+|+|+
T Consensus 224 ~---~-~~~~l~-i~G~~~~-~~~~~--~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~ 295 (364)
T cd03814 224 R---R-PPVRLV-IVGDGPA-RARLE--ARYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVA 295 (364)
T ss_pred h---c-CCceEE-EEeCCch-HHHHh--ccCCcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEEE
Confidence 4 1 467655 4565542 22333 446789999975 689999999999998874 7999999999999999
Q ss_pred ecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Q 012492 370 NDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLA 441 (462)
Q Consensus 370 ~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~ 441 (462)
++.++ +.+.+.+.+.|+++. +.+++++++.+++ +|++.+++|++++++.+..++++++++.+.+++
T Consensus 296 ~~~~~-----~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 296 PDAGG-----PADIVTDGENGLLVEPGDAEAFAAALAALL-ADPELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred cCCCC-----chhhhcCCcceEEcCCCCHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 98643 233455557787764 5777999999999 799999999999999998899999999998875
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-22 Score=206.91 Aligned_cols=337 Identities=16% Similarity=0.148 Sum_probs=212.9
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhH
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHS 142 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 142 (462)
..|+|.+.|. |+...+..|+++|++++|+ +.+.++...+ ++ .......+.. ..... .
T Consensus 51 ~~iW~Ha~s~--Ge~~~~~~l~~~l~~~~~~-~~i~~t~~t~--~~--~~~~~~~~~~--------~~~~~--------~ 107 (425)
T PRK05749 51 PLIWFHAVSV--GETRAAIPLIRALRKRYPD-LPILVTTMTP--TG--SERAQALFGD--------DVEHR--------Y 107 (425)
T ss_pred CeEEEEeCCH--HHHHHHHHHHHHHHHhCCC-CcEEEeCCCc--cH--HHHHHHhcCC--------CceEE--------E
Confidence 3599999999 6999999999999998764 3444442211 11 1111110000 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC-CC---------cccccCC
Q 012492 143 CYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT-CH---------PTWFHPR 212 (462)
Q Consensus 143 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~-~~---------~~~~~~~ 212 (462)
++ ......+.+++++++||+|+++....+...+..++. .++|++.+.+.... .. ..+..+.
T Consensus 108 ~P-----~d~~~~~~~~l~~~~Pd~v~~~~~~~~~~~l~~~~~----~~ip~vl~~~~~~~~s~~~~~~~~~~~r~~~~~ 178 (425)
T PRK05749 108 LP-----YDLPGAVRRFLRFWRPKLVIIMETELWPNLIAELKR----RGIPLVLANARLSERSFKRYQKFKRFYRLLFKN 178 (425)
T ss_pred ec-----CCcHHHHHHHHHhhCCCEEEEEecchhHHHHHHHHH----CCCCEEEEeccCChhhHHHHHHHHHHHHHHHHh
Confidence 00 111235567799999999987643322211233343 48998866543321 00 1234566
Q ss_pred CcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhccc--CChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHH
Q 012492 213 VNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAV--ISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMAL 290 (462)
Q Consensus 213 ~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~--~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l 290 (462)
+|.++++|+.+++.+.+.|++++ +.++||.-.+.+..+. .+...++++++ ++.+++ +++|.. .+....+++++
T Consensus 179 ~d~ii~~S~~~~~~l~~~g~~~~-i~vi~n~~~d~~~~~~~~~~~~~~r~~~~--~~~~vi-l~~~~~-~~~~~~ll~A~ 253 (425)
T PRK05749 179 IDLVLAQSEEDAERFLALGAKNE-VTVTGNLKFDIEVPPELAARAATLRRQLA--PNRPVW-IAASTH-EGEEELVLDAH 253 (425)
T ss_pred CCEEEECCHHHHHHHHHcCCCCC-cEecccccccCCCChhhHHHHHHHHHHhc--CCCcEE-EEeCCC-chHHHHHHHHH
Confidence 89999999999999998898877 8899985221111110 12235566676 345554 445443 33344444444
Q ss_pred HHhhhcccCCCCCceEEEEccCCH----HHHHHHhhccCC-------------CCeEEeccchhHHHHHHhcchh-eecC
Q 012492 291 GESLLDKETGRPIGQLIIICGRNR----TLASTLQSEEWK-------------IPVKVRGFETQMEKWMGACDCI-ITKA 352 (462)
Q Consensus 291 ~~~l~~~~~~~~~~~~lvv~G~~~----~l~~~~~~~~~~-------------~~V~~~g~~~~~~~l~~~aD~v-V~~s 352 (462)
+.+.+ ..|+++++ ++|++. ++.+.++++++. .+|.+.+..+++..+|+.||++ +.+|
T Consensus 254 -~~l~~---~~~~~~li-ivG~g~~r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~S 328 (425)
T PRK05749 254 -RALLK---QFPNLLLI-LVPRHPERFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVGGS 328 (425)
T ss_pred -HHHHH---hCCCcEEE-EcCCChhhHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEECCC
Confidence 44433 24777755 456553 245555555542 2566666678999999999995 4333
Q ss_pred ----ChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcC--
Q 012492 353 ----GPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQ-- 426 (462)
Q Consensus 353 ----g~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~-- 426 (462)
||.+++|||++|+|+|+.+..++... ..+.+.+.|.++.+.|++++++++.+++ +|++.+++|++++++++.
T Consensus 329 ~~e~~g~~~lEAma~G~PVI~g~~~~~~~e-~~~~~~~~g~~~~~~d~~~La~~l~~ll-~~~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 329 LVKRGGHNPLEPAAFGVPVISGPHTFNFKE-IFERLLQAGAAIQVEDAEDLAKAVTYLL-TDPDARQAYGEAGVAFLKQN 406 (425)
T ss_pred cCCCCCCCHHHHHHhCCCEEECCCccCHHH-HHHHHHHCCCeEEECCHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHhC
Confidence 58899999999999999886544322 3445556788888889999999999999 799999999999999874
Q ss_pred CcHHHHHHHHHHHHHhc
Q 012492 427 PEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 427 ~~~~~~ia~~i~~l~~~ 443 (462)
..+++++.+.+.+++++
T Consensus 407 ~~~~~~~~~~l~~~l~~ 423 (425)
T PRK05749 407 QGALQRTLQLLEPYLPP 423 (425)
T ss_pred ccHHHHHHHHHHHhccc
Confidence 45667888888776554
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-22 Score=204.50 Aligned_cols=340 Identities=12% Similarity=0.085 Sum_probs=202.2
Q ss_pred CCCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchh
Q 012492 61 RTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWI 140 (462)
Q Consensus 61 ~~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 140 (462)
..+||++++...+ |+..+...+|++|.++|| +|.++... .+++...... ... + ..+............
T Consensus 2 ~~~~~~~~~~~~~-~~~~R~~~~a~~L~~~G~---~V~ii~~~---~~~~~~~~~~-~~~-v---~~~~~~~~~~~~~~~ 69 (415)
T cd03816 2 KRKRVCVLVLGDI-GRSPRMQYHALSLAKHGW---KVDLVGYL---ETPPHDEILS-NPN-I---TIHPLPPPPQRLNKL 69 (415)
T ss_pred CccEEEEEEeccc-CCCHHHHHHHHHHHhcCc---eEEEEEec---CCCCCHHHhc-CCC-E---EEEECCCCccccccc
Confidence 4578999988874 777777889999999986 44444211 1111111000 000 0 000000000000000
Q ss_pred hHHHHH-HHHHHHHHH-HHHHHHhhCCCEEEECCcccc--hHHHHHHHHcCCCCCCeEEEEecCCCC---------CC--
Q 012492 141 HSCYLA-AMAAYYAKE-VEAGLMEYKPDIIISVHPLMQ--HIPLWVLKWQGLQKKVIFVTVITDLNT---------CH-- 205 (462)
Q Consensus 141 ~~~~~~-~~~~~~~~~-l~~~l~~~kPDvVi~~~~~~~--~~~~~~~~~~~~~~~iP~v~~~~d~~~---------~~-- 205 (462)
...... ......... +..++++.+||+|+++.+... ....+++++. .++|+|...|+... ..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~---~~~~~V~~~h~~~~~~~~~~~~~~~~~ 146 (415)
T cd03816 70 PFLLFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLL---RRTKLIIDWHNYGYTILALKLGENHPL 146 (415)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH---hCCeEEEEcCCchHHHHhcccCCCCHH
Confidence 010000 001111222 233467779999998764432 2112222322 37899877776421 00
Q ss_pred -------cccccCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHH-----------------
Q 012492 206 -------PTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLE----------------- 261 (462)
Q Consensus 206 -------~~~~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~----------------- 261 (462)
..|+++.+|+++++|+.+++.+.+.+++++++.+++|+....|... .....+..
T Consensus 147 ~~~~~~~e~~~~~~ad~ii~vS~~~~~~l~~~~~~~~ki~vI~Ng~~~~f~p~--~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (415)
T cd03816 147 VRLAKWYEKLFGRLADYNLCVTKAMKEDLQQFNNWKIRATVLYDRPPEQFRPL--PLEEKHELFLKLAKTFLTRELRIGA 224 (415)
T ss_pred HHHHHHHHHHHhhcCCEeeecCHHHHHHHHhhhccCCCeeecCCCCHHHceeC--cHHHHHHHHHhcccccccccccccc
Confidence 0134567899999999999999887888899999999754333221 11111111
Q ss_pred cCCCCCCcEEEEEeCCCCC-ccHHHHHHHHHHhhhccc---CCCCCceEEEEccCCH---HHHHHHhhccCCCCeEE-ec
Q 012492 262 LQMDPILPAVLLMGGGEGM-GPVKETAMALGESLLDKE---TGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKV-RG 333 (462)
Q Consensus 262 l~l~~~~~~iLv~gG~~~~-~~~~~~l~~l~~~l~~~~---~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~-~g 333 (462)
.++.++.+.++++.|+.+. +++..+++++ +.+.+.. ..+|+++++++ |.+. ++.+.++++++. ++.+ .|
T Consensus 225 ~~~~~~~~~vi~~~grl~~~K~~~~li~A~-~~l~~~~~~~~~~~~i~l~iv-G~G~~~~~l~~~~~~~~l~-~~~~~~g 301 (415)
T cd03816 225 VQLSEERPALLVSSTSWTPDEDFGILLDAL-VAYEKSAATGPKLPKLLCIIT-GKGPLKEKYLERIKELKLK-KVTIRTP 301 (415)
T ss_pred ceecCCCceEEEEeccccCCCCHHHHHHHH-HHHHHhhcccccCCCEEEEEE-ecCccHHHHHHHHHHcCCC-cEEEEcC
Confidence 1233344455555566654 5555555544 4543210 12367776554 5443 356667777775 5554 46
Q ss_pred cc--hhHHHHHHhcchheec----C---ChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeCCHHHHHHHHH
Q 012492 334 FE--TQMEKWMGACDCIITK----A---GPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVT 404 (462)
Q Consensus 334 ~~--~~~~~l~~~aD~vV~~----s---g~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~ 404 (462)
++ +++.++|++||++|+. + .|++++|||+||+|+|+++.++ ..+.+.+.+.|+++.|+++++++|.
T Consensus 302 ~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~-----~~eiv~~~~~G~lv~d~~~la~~i~ 376 (415)
T cd03816 302 WLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKC-----IDELVKHGENGLVFGDSEELAEQLI 376 (415)
T ss_pred cCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCC-----HHHHhcCCCCEEEECCHHHHHHHHH
Confidence 75 7999999999998852 1 2788999999999999988642 2234445557888899999999999
Q ss_pred HHhcCC---HHHHHHHHHHHHhhcC
Q 012492 405 EWFSTK---TDELKRMSENALKLAQ 426 (462)
Q Consensus 405 ~ll~~d---~~~~~~m~~~a~~~~~ 426 (462)
+++ +| ++.+++|++++++..+
T Consensus 377 ~ll-~~~~~~~~~~~m~~~~~~~~~ 400 (415)
T cd03816 377 DLL-SNFPNRGKLNSLKKGAQEESE 400 (415)
T ss_pred HHH-hcCCCHHHHHHHHHHHHHhhh
Confidence 999 67 9999999999999874
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-22 Score=202.04 Aligned_cols=273 Identities=18% Similarity=0.163 Sum_probs=189.5
Q ss_pred HHHHHHHHHHhh--CCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC-----cc-------------cccC
Q 012492 152 YAKEVEAGLMEY--KPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH-----PT-------------WFHP 211 (462)
Q Consensus 152 ~~~~l~~~l~~~--kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~-----~~-------------~~~~ 211 (462)
+...+.+.+++. +||+|+++..........+++. .++|+|...|+..... .. +..+
T Consensus 87 ~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~----~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (398)
T cd03800 87 FADDLLRFLRREGGRPDLIHAHYWDSGLVALLLARR----LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLR 162 (398)
T ss_pred HHHHHHHHHHhcCCCccEEEEecCccchHHHHHHhh----cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHh
Confidence 344556677777 9999999876544433333333 4889887777643110 01 1234
Q ss_pred CCcEEEEcCHHHHHHHHHcC-CCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHH
Q 012492 212 RVNRCYCPSKEVAKRASYFG-LEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMAL 290 (462)
Q Consensus 212 ~~d~~i~~s~~~~~~l~~~g-i~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l 290 (462)
.+|.++++|+...+.+.+.+ .+..++.+++|+++...+.+.......+++++.+++.++++++|+....++...+++++
T Consensus 163 ~ad~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gr~~~~k~~~~ll~a~ 242 (398)
T cd03800 163 AADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPRILAVGRLDPRKGIDTLIRAY 242 (398)
T ss_pred hCCEEEEcCHHHHHHHHHHccccccccEEECCCCCccceecccchhhHHHhhccCCCCcEEEEEcccccccCHHHHHHHH
Confidence 68999999999988887654 34456999999998765543222222255566666666655555444445565555544
Q ss_pred HHhhhcccCCCCCceEEEEccCCHH--------HHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC----hhh
Q 012492 291 GESLLDKETGRPIGQLIIICGRNRT--------LASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG----PGT 356 (462)
Q Consensus 291 ~~~l~~~~~~~~~~~~lvv~G~~~~--------l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg----~~t 356 (462)
..+.+. .+++++++++|.... +.+..+.++...++.+.|++ +++..+|+.||+++.+|. |.+
T Consensus 243 -~~l~~~---~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~ 318 (398)
T cd03800 243 -AELPEL---RERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLT 318 (398)
T ss_pred -HHHHHh---CCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEecccccccCcH
Confidence 455432 457777666543321 12334556777899999997 589999999999998864 789
Q ss_pred HHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc-CCcHHHHH
Q 012492 357 IAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLA-QPEAVVDI 433 (462)
Q Consensus 357 ~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~-~~~~~~~i 433 (462)
++|||++|+|+|+++..+ ..+.+.+.+.|++++ ++++++++|.+++ ++++.+++|++++++.+ +.++++.+
T Consensus 319 l~Ea~a~G~Pvi~s~~~~-----~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~-~~~~~~~~~~~~a~~~~~~~~s~~~~ 392 (398)
T cd03800 319 ALEAMACGLPVVATAVGG-----PRDIVVDGVTGLLVDPRDPEALAAALRRLL-TDPALRRRLSRAGLRRARARYTWERV 392 (398)
T ss_pred HHHHHhcCCCEEECCCCC-----HHHHccCCCCeEEeCCCCHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 999999999999988643 223444455788775 6999999999999 79999999999999988 78999999
Q ss_pred HHHHH
Q 012492 434 VKDIH 438 (462)
Q Consensus 434 a~~i~ 438 (462)
++.++
T Consensus 393 ~~~~~ 397 (398)
T cd03800 393 AARLL 397 (398)
T ss_pred HHHHh
Confidence 98875
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-22 Score=196.97 Aligned_cols=325 Identities=16% Similarity=0.196 Sum_probs=212.2
Q ss_pred eEEEEecCCC--chHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhh
Q 012492 64 NVLILMSDTG--GGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIH 141 (462)
Q Consensus 64 kIli~~~~~G--~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 141 (462)
||+|++.+.+ ||....+..++++|.+.|+ +|.+......... ........ ......... ....
T Consensus 1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~g~---~v~v~~~~~~~~~--~~~~~~~~-------~~~~~~~~~--~~~~- 65 (348)
T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEKGH---EVTIISLDKGEPP--FYELDPKI-------KVIDLGDKR--DSKL- 65 (348)
T ss_pred CeEEEeccccCCCChHHHHHHHHHHHHhCCC---eEEEEecCCCCCC--ccccCCcc-------ceeeccccc--ccch-
Confidence 6888886543 7999999999999998775 4444432211000 00000000 000000000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCC-CeEEEEecCCCCCC---------cccccC
Q 012492 142 SCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKK-VIFVTVITDLNTCH---------PTWFHP 211 (462)
Q Consensus 142 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~-iP~v~~~~d~~~~~---------~~~~~~ 211 (462)
.........+.+++++.+||+|+++++.... ...... .+ +|++.+.|+..... ..+..+
T Consensus 66 -----~~~~~~~~~~~~~l~~~~~d~i~~~~~~~~~--~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (348)
T cd03820 66 -----LARFKKLRRLRKLLKNNKPDVVISFLTSLLT--FLASLG----LKIVKLIVSEHNSPDAYKKRLRRLLLRRLLYR 134 (348)
T ss_pred -----hccccchHHHHHhhcccCCCEEEEcCchHHH--HHHHHh----hccccEEEecCCCccchhhhhHHHHHHHHHHh
Confidence 0112334566778999999999999876211 122221 23 48877766543211 122356
Q ss_pred CCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHH
Q 012492 212 RVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALG 291 (462)
Q Consensus 212 ~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~ 291 (462)
.+|.+++.|+... ......+..++.+++|+++....... .+.+.+.++.+|+....++...++..+
T Consensus 135 ~~d~ii~~s~~~~--~~~~~~~~~~~~vi~~~~~~~~~~~~-----------~~~~~~~i~~~g~~~~~K~~~~l~~~~- 200 (348)
T cd03820 135 RADAVVVLTEEDR--ALYYKKFNKNVVVIPNPLPFPPEEPS-----------SDLKSKRILAVGRLVPQKGFDLLIEAW- 200 (348)
T ss_pred cCCEEEEeCHHHH--HHhhccCCCCeEEecCCcChhhcccc-----------CCCCCcEEEEEEeeccccCHHHHHHHH-
Confidence 7899999999886 22334556789999999987654321 123455666666554555555555544
Q ss_pred HhhhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCC----hhhHHHHHHhC
Q 012492 292 ESLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAG----PGTIAEALIRG 364 (462)
Q Consensus 292 ~~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg----~~t~~EAla~G 364 (462)
+.+.+ ..++++++++ |.+. .+.+.+++++...+|.+.|+.+++..+|+.||++|.+|. |.+++|||++|
T Consensus 201 ~~l~~---~~~~~~l~i~-G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G 276 (348)
T cd03820 201 AKIAK---KHPDWKLRIV-GDGPEREALEALIKELGLEDRVILLGFTKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFG 276 (348)
T ss_pred HHHHh---cCCCeEEEEE-eCCCCHHHHHHHHHHcCCCCeEEEcCCcchHHHHHHhCCEEEeCccccccCHHHHHHHHcC
Confidence 55543 2467776554 5443 244556667788899999999999999999999998874 89999999999
Q ss_pred CCEEEecCCCCccccchHHHHHCC-ceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHH
Q 012492 365 LPIILNDYIPGQEKGNVPYVVDNG-AGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIH 438 (462)
Q Consensus 365 ~PvI~~~~~~~~~~~n~~~l~~~G-~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~ 438 (462)
+|+|+++...+. ..+.+.+ .|++++ ++++++++|.+++ +|++.+++|++++++..+.++++++++.+.
T Consensus 277 ~Pvi~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~i~~ll-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 277 LPVISFDCPTGP-----SEIIEDGVNGLLVPNGDVEALAEALLRLM-EDEELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred CCEEEecCCCch-----HhhhccCcceEEeCCCCHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 999999865432 2355555 777765 5799999999999 799999999999999999999999998875
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-22 Score=199.07 Aligned_cols=262 Identities=14% Similarity=0.127 Sum_probs=188.0
Q ss_pred HHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCC-Cc--c-------------cccCCCcEE
Q 012492 153 AKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTC-HP--T-------------WFHPRVNRC 216 (462)
Q Consensus 153 ~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~-~~--~-------------~~~~~~d~~ 216 (462)
...+.+++++++||+||++++......+.+++. .++|+|...|+.... .. . ...+.+|.+
T Consensus 71 ~~~~~~~~~~~~~dvvh~~~~~~~~~~~~~~~~----~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 146 (367)
T cd05844 71 APQLRRLLRRHRPDLVHAHFGFDGVYALPLARR----LGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALF 146 (367)
T ss_pred ccHHHHHHHhhCCCEEEeccCchHHHHHHHHHH----cCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEE
Confidence 344555789999999999876544433334443 479998877754311 11 0 112467999
Q ss_pred EEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhc
Q 012492 217 YCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLD 296 (462)
Q Consensus 217 i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~ 296 (462)
+++|+..++.+.+.|+++.++.+++|+++...+.+. . ...+.+.++++|+....++...+++++ ..+.+
T Consensus 147 i~~s~~~~~~~~~~~~~~~~i~vi~~g~d~~~~~~~-~---------~~~~~~~i~~~G~~~~~K~~~~li~a~-~~l~~ 215 (367)
T cd05844 147 IAVSQFIRDRLLALGFPPEKVHVHPIGVDTAKFTPA-T---------PARRPPRILFVGRFVEKKGPLLLLEAF-ARLAR 215 (367)
T ss_pred EECCHHHHHHHHHcCCCHHHeEEecCCCCHHhcCCC-C---------CCCCCcEEEEEEeeccccChHHHHHHH-HHHHH
Confidence 999999999998888888899999999987654431 0 112344555555444445555555544 44543
Q ss_pred ccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC----------hhhHHHHH
Q 012492 297 KETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG----------PGTIAEAL 361 (462)
Q Consensus 297 ~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg----------~~t~~EAl 361 (462)
+.++++++ ++|.+. ++.+..+++++..+|.|.|++ +++.++|+.||++|.+|. |++++|||
T Consensus 216 ---~~~~~~l~-ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~ 291 (367)
T cd05844 216 ---RVPEVRLV-IIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQ 291 (367)
T ss_pred ---hCCCeEEE-EEeCchHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHH
Confidence 24677655 456554 244555666778899999998 689999999999998762 78999999
Q ss_pred HhCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc-CCcHHHHHHHHHH
Q 012492 362 IRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLA-QPEAVVDIVKDIH 438 (462)
Q Consensus 362 a~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~-~~~~~~~ia~~i~ 438 (462)
++|+|+|+++..+ +.+.+.+.+.|++++ ++++++++|.+++ +|++.+++|++++++.+ +.++|+.+++.+.
T Consensus 292 a~G~PvI~s~~~~-----~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~-~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 292 ASGVPVVATRHGG-----IPEAVEDGETGLLVPEGDVAALAAALGRLL-ADPDLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HcCCCEEEeCCCC-----chhheecCCeeEEECCCCHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 9999999998743 334455556777774 7899999999999 79999999999999887 5789999999886
Q ss_pred H
Q 012492 439 D 439 (462)
Q Consensus 439 ~ 439 (462)
+
T Consensus 366 ~ 366 (367)
T cd05844 366 A 366 (367)
T ss_pred c
Confidence 5
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-22 Score=198.86 Aligned_cols=323 Identities=15% Similarity=0.061 Sum_probs=203.4
Q ss_pred eEEEEecC-CCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhH
Q 012492 64 NVLILMSD-TGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHS 142 (462)
Q Consensus 64 kIli~~~~-~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 142 (462)
||++++.+ .+||....+..++++|.+.|+ ++.+..... .. ......... .+..+..... ....
T Consensus 1 kIl~~~~~~~~GG~~~~~~~l~~~L~~~~~---~v~~i~~~~----~~-~~~~~~~~~-------~~~~~~~~~~-~~~~ 64 (358)
T cd03812 1 KILHIVGTMNRGGIETFIMNYYRNLDRSKI---QFDFLVTSK----EE-GDYDDEIEK-------LGGKIYYIPA-RKKN 64 (358)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHhcCccce---EEEEEEeCC----CC-cchHHHHHH-------cCCeEEEecC-CCcc
Confidence 68888765 336999999999999997763 555442211 11 011010000 0000000000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEE-EEecCCCCCCc------------ccc
Q 012492 143 CYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFV-TVITDLNTCHP------------TWF 209 (462)
Q Consensus 143 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v-~~~~d~~~~~~------------~~~ 209 (462)
...+.+.+.+.+++.+||+|+++.+.........++. .+.|.+ ...|+...... .+.
T Consensus 65 ------~~~~~~~~~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (358)
T cd03812 65 ------PLKYFKKLYKLIKKNKYDIVHVHGSSASGFILLAAKK----AGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLI 134 (358)
T ss_pred ------HHHHHHHHHHHHhcCCCCEEEEeCcchhHHHHHHHhh----CCCCeEEEEeccccccccccchhhHHHHHHHHH
Confidence 1123345566788999999999887644443333333 245543 33443321110 112
Q ss_pred cCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHH
Q 012492 210 HPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMA 289 (462)
Q Consensus 210 ~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~ 289 (462)
...++.++++++...+.+... +++.++.+++|+++...+.........+++++..++.+.++++|+....+++..++.+
T Consensus 135 ~~~~~~~i~~s~~~~~~~~~~-~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a 213 (358)
T cd03812 135 NRLATDYLACSEEAGKWLFGK-VKNKKFKVIPNGIDLEKFIFNEEIRKKRRELGILEDKFVIGHVGRFSEQKNHEFLIEI 213 (358)
T ss_pred HhcCCEEEEcCHHHHHHHHhC-CCcccEEEEeccCcHHHcCCCchhhhHHHHcCCCCCCEEEEEEeccccccChHHHHHH
Confidence 356789999999998888766 5678899999999876544322222225556666666665555554445555555554
Q ss_pred HHHhhhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCC----hhhHHHHHH
Q 012492 290 LGESLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAG----PGTIAEALI 362 (462)
Q Consensus 290 l~~~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg----~~t~~EAla 362 (462)
+ ..+.+. .++++++++ |.+. .+.+.++++++..+|.+.|+.+++.++|+.||++|.+|. |++++|||+
T Consensus 214 ~-~~l~~~---~~~~~l~iv-G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma 288 (358)
T cd03812 214 F-AELLKK---NPNAKLLLV-GDGELEEEIKKKVKELGLEDKVIFLGVRNDVPELLQAMDVFLFPSLYEGLPLVLIEAQA 288 (358)
T ss_pred H-HHHHHh---CCCeEEEEE-eCCchHHHHHHHHHhcCCCCcEEEecccCCHHHHHHhcCEEEecccccCCCHHHHHHHH
Confidence 4 555442 467776554 5443 355566677888999999999999999999999999874 899999999
Q ss_pred hCCCEEEecCCCCccccchHHHHHCCceeee-C-CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc
Q 012492 363 RGLPIILNDYIPGQEKGNVPYVVDNGAGVFT-R-SPKETARIVTEWFSTKTDELKRMSENALKLA 425 (462)
Q Consensus 363 ~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~-~-~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~ 425 (462)
+|+|+|+++.++..+ .+.+ +.+++. + ++++++++|.+++ +||+.++.|...+....
T Consensus 289 ~G~PvI~s~~~~~~~-----~i~~-~~~~~~~~~~~~~~a~~i~~l~-~~~~~~~~~~~~~~~~~ 346 (358)
T cd03812 289 SGLPCILSDTITKEV-----DLTD-LVKFLSLDESPEIWAEEILKLK-SEDRRERSSESIKKKGL 346 (358)
T ss_pred hCCCEEEEcCCchhh-----hhcc-CccEEeCCCCHHHHHHHHHHHH-hCcchhhhhhhhhhccc
Confidence 999999998754322 2333 555444 3 4699999999999 79999988887765543
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.9e-22 Score=197.00 Aligned_cols=339 Identities=18% Similarity=0.203 Sum_probs=212.1
Q ss_pred eEEEEec---CCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchh
Q 012492 64 NVLILMS---DTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWI 140 (462)
Q Consensus 64 kIli~~~---~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 140 (462)
||++++. +.++|+...+.+++++|.+.|+ +|.+...... ...... . +.. . ..+.... ...
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~g~---~v~v~~~~~~--~~~~~~--~-~~~-~---~~~~~~~-----~~~ 63 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKRGH---EVYVVAPSYP--GAPEEE--E-VVV-V---RPFRVPT-----FKY 63 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHcCC---eEEEEeCCCC--CCCccc--c-ccc-c---ccccccc-----chh
Confidence 6788862 3346999999999999999875 4444322110 000000 0 000 0 0000000 000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHH-HHHHcCCCCCCeEEEEecCCCCC---------------
Q 012492 141 HSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLW-VLKWQGLQKKVIFVTVITDLNTC--------------- 204 (462)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~-~~~~~~~~~~iP~v~~~~d~~~~--------------- 204 (462)
.. ..........+.+.+++.+||+|+++.++....... +++. .++|++...|+....
T Consensus 64 ~~---~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 136 (374)
T cd03817 64 PD---FRLPLPIPRALIIILKELGPDIVHTHTPFSLGLLGLRVARK----LGIPVVATYHTMYEDYTHYVPLGRLLARAV 136 (374)
T ss_pred hh---hhccccHHHHHHHHHhhcCCCEEEECCchhhhhHHHHHHHH----cCCCEEEEecCCHHHHHHHHhcccchhHHH
Confidence 00 000112233445568899999999988765433222 2232 489998877764210
Q ss_pred ----CcccccCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCC
Q 012492 205 ----HPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGM 280 (462)
Q Consensus 205 ----~~~~~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~ 280 (462)
...+..+.+|.+++.|+...+.+.+.+.+ .++.+++++++...+.. ..+...+++++++++.+.++++|+....
T Consensus 137 ~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~~~~-~~~~vi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~G~~~~~ 214 (374)
T cd03817 137 VRRKLSRRFYNRCDAVIAPSEKIADLLREYGVK-RPIEVIPTGIDLDRFEP-VDGDDERRKLGIPEDEPVLLYVGRLAKE 214 (374)
T ss_pred HHHHHHHHHhhhCCEEEeccHHHHHHHHhcCCC-CceEEcCCccchhccCc-cchhHHHHhcCCCCCCeEEEEEeeeecc
Confidence 00122356899999999988888777664 45899999998765543 2333446667776666555555443334
Q ss_pred ccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC--
Q 012492 281 GPVKETAMALGESLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG-- 353 (462)
Q Consensus 281 ~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg-- 353 (462)
++...++..+ +.+.+. .++++++++ |.+. .+.+..++++...+|.+.|++ +++..+|+.||+++.++.
T Consensus 215 k~~~~l~~~~-~~~~~~---~~~~~l~i~-G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e 289 (374)
T cd03817 215 KNIDFLIRAF-ARLLKE---EPDVKLVIV-GDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTE 289 (374)
T ss_pred cCHHHHHHHH-HHHHHh---CCCeEEEEE-eCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEeccccc
Confidence 5555555544 444431 356776554 5443 244455556778899999998 689999999999998763
Q ss_pred --hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeCCHH-HHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHH
Q 012492 354 --PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPK-ETARIVTEWFSTKTDELKRMSENALKLAQPEAV 430 (462)
Q Consensus 354 --~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~-~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~ 430 (462)
+.+++|||++|+|+|+++.+.. .+.+.+.+.|+++++.+ ++++++.+++ ++++.+++|++++++.+..+.
T Consensus 290 ~~~~~~~Ea~~~g~PvI~~~~~~~-----~~~i~~~~~g~~~~~~~~~~~~~i~~l~-~~~~~~~~~~~~~~~~~~~~~- 362 (374)
T cd03817 290 TQGLVLLEAMAAGLPVVAVDAPGL-----PDLVADGENGFLFPPGDEALAEALLRLL-QDPELRRRLSKNAEESAEKFS- 362 (374)
T ss_pred CcChHHHHHHHcCCcEEEeCCCCh-----hhheecCceeEEeCCCCHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHH-
Confidence 7899999999999999986432 23344446777776433 8999999999 799999999999999887655
Q ss_pred HHHHHHHHHHHh
Q 012492 431 VDIVKDIHDLAA 442 (462)
Q Consensus 431 ~~ia~~i~~l~~ 442 (462)
.++.++++++
T Consensus 363 --~~~~~~~~~~ 372 (374)
T cd03817 363 --FAKKVEKLYE 372 (374)
T ss_pred --HHHHHHHHHh
Confidence 4455555443
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-22 Score=195.13 Aligned_cols=343 Identities=15% Similarity=0.137 Sum_probs=223.2
Q ss_pred eEEEEecC---CCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchh
Q 012492 64 NVLILMSD---TGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWI 140 (462)
Q Consensus 64 kIli~~~~---~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 140 (462)
||++++.. .++|+......++++|.+.|+ +|.+...... ............ .... ... ...
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~g~---~v~i~~~~~~-~~~~~~~~~~~~--------~~~~---~~~-~~~ 64 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAARGH---EVTVLTPGDG-GLPDEEEVGGIV--------VVRP---PPL-LRV 64 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhcCc---eEEEEecCCC-CCCceeeecCcc--------eecC---Ccc-ccc
Confidence 67888632 336999999999999998875 4444422111 000000000000 0000 000 000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCc--------------
Q 012492 141 HSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHP-------------- 206 (462)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~-------------- 206 (462)
............+.+.+++.+||+|+++++..........+. .++|++...|+......
T Consensus 65 ---~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~----~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~ 137 (374)
T cd03801 65 ---RRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAARL----LGIPLVLTVHGLEFGRPGNELGLLLKLARAL 137 (374)
T ss_pred ---chhHHHHHHHHHHHHHhhhcCCcEEEEechhHHHHHHHHHHh----cCCcEEEEeccchhhccccchhHHHHHHHHH
Confidence 001112334455667889999999999987765543223332 48999988887642111
Q ss_pred -ccccCCCcEEEEcCHHHHHHHHHcC-CCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHH
Q 012492 207 -TWFHPRVNRCYCPSKEVAKRASYFG-LEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVK 284 (462)
Q Consensus 207 -~~~~~~~d~~i~~s~~~~~~l~~~g-i~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~ 284 (462)
.+..+.+|.+++.|+...+.+.+.+ .+..++.+++++++....... . ...+.....+.+.+.++++|+....++..
T Consensus 138 ~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~i~~~g~~~~~k~~~ 215 (374)
T cd03801 138 ERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPA-P-RAARRRLGIPEDEPVILFVGRLVPRKGVD 215 (374)
T ss_pred HHHHHHhCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccCcc-c-hHHHhhcCCcCCCeEEEEecchhhhcCHH
Confidence 1234568999999999999988764 333689999999987655431 1 33334444455556666666555555666
Q ss_pred HHHHHHHHhhhcccCCCCCceEEEEccCCHH---HHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecC----Chh
Q 012492 285 ETAMALGESLLDKETGRPIGQLIIICGRNRT---LASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKA----GPG 355 (462)
Q Consensus 285 ~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~---l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~s----g~~ 355 (462)
.+++.+ ..+.+. .+++++++ +|.+.. +.+.+++++...+|.+.|++ +++.++|+.||+++.++ .++
T Consensus 216 ~~i~~~-~~~~~~---~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~ 290 (374)
T cd03801 216 LLLEAL-AKLRKE---YPDVRLVI-VGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGL 290 (374)
T ss_pred HHHHHH-HHHhhh---cCCeEEEE-EeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchhccccc
Confidence 666544 444431 35677654 455442 33444456778899999999 89999999999999875 388
Q ss_pred hHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHH-hhcCCcHHHH
Q 012492 356 TIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENAL-KLAQPEAVVD 432 (462)
Q Consensus 356 t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~-~~~~~~~~~~ 432 (462)
+++|||++|+|+|+++.++ ..+.+.+.+.|+++. +++++++++.+++ +|++.+++|+++++ ...+.+++++
T Consensus 291 ~~~Ea~~~g~pvI~~~~~~-----~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (374)
T cd03801 291 VLLEAMAAGLPVVASDVGG-----IPEVVEDGETGLLVPPGDPEALAEAILRLL-DDPELRRRLGEAARERVAERFSWDR 364 (374)
T ss_pred hHHHHHHcCCcEEEeCCCC-----hhHHhcCCcceEEeCCCCHHHHHHHHHHHH-cChHHHHHHHHHHHHHHHHhcCHHH
Confidence 9999999999999998632 223344456677765 4699999999999 79999999999998 4567889999
Q ss_pred HHHHHHHHHh
Q 012492 433 IVKDIHDLAA 442 (462)
Q Consensus 433 ia~~i~~l~~ 442 (462)
+++.+.++++
T Consensus 365 ~~~~~~~~~~ 374 (374)
T cd03801 365 VAARTEEVYY 374 (374)
T ss_pred HHHHHHHhhC
Confidence 9999988763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.7e-22 Score=196.61 Aligned_cols=335 Identities=14% Similarity=0.095 Sum_probs=210.5
Q ss_pred eEEEEecC--CCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhh
Q 012492 64 NVLILMSD--TGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIH 141 (462)
Q Consensus 64 kIli~~~~--~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 141 (462)
||+|++.. .++|..+.+..|+++|.+.|+. +.++...... .......... .. .... ..
T Consensus 1 kI~~v~~~~~~~gG~~~~~~~l~~~L~~~g~~-v~v~~~~~~~--~~~~~~~~~~---------~~----~~~~---~~- 60 (366)
T cd03822 1 RIALVSPYPPRKCGIATFTTDLVNALSARGPD-VLVVSVAALY--PSLLYGGEQE---------VV----RVIV---LD- 60 (366)
T ss_pred CeEEecCCCCCCCcHHHHHHHHHHHhhhcCCe-EEEEEeeccc--CcccCCCccc---------ce----eeee---cC-
Confidence 68888743 2369999999999999999863 2333221110 0100000000 00 0000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcc--cchHHHHHHHHcCCCCCCeEEEEecCCCCCCcc--------cccC
Q 012492 142 SCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPL--MQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPT--------WFHP 211 (462)
Q Consensus 142 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~--~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~--------~~~~ 211 (462)
.......+.+.+++.+||+||+++.. ........+.......++|+|.+.|+....... .+.+
T Consensus 61 -------~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~ 133 (366)
T cd03822 61 -------NPLDYRRAARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPGDRALLRLLLR 133 (366)
T ss_pred -------CchhHHHHHHHHhhcCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccchhhhHHHHHHHh
Confidence 01122344567889999999987621 111111111110011489999999886211111 1245
Q ss_pred CCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHH
Q 012492 212 RVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALG 291 (462)
Q Consensus 212 ~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~ 291 (462)
.+|.++++|....+.+...+. .+++.+++++++...... ... . ++...+.+.++++++|+....++...++.++
T Consensus 134 ~~d~ii~~s~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~--~~~-~-~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~- 207 (366)
T cd03822 134 RADAVIVMSSELLRALLLRAY-PEKIAVIPHGVPDPPAEP--PES-L-KALGGLDGRPVLLTFGLLRPYKGLELLLEAL- 207 (366)
T ss_pred cCCEEEEeeHHHHHHHHhhcC-CCcEEEeCCCCcCcccCC--chh-h-HhhcCCCCCeEEEEEeeccCCCCHHHHHHHH-
Confidence 689999996444444443332 468999999998655432 111 1 2333445566666666555556666666555
Q ss_pred HhhhcccCCCCCceEEEEccCCH-HH---HH----HHhhccCCCCeEEecc-c--hhHHHHHHhcchheecCC------h
Q 012492 292 ESLLDKETGRPIGQLIIICGRNR-TL---AS----TLQSEEWKIPVKVRGF-E--TQMEKWMGACDCIITKAG------P 354 (462)
Q Consensus 292 ~~l~~~~~~~~~~~~lvv~G~~~-~l---~~----~~~~~~~~~~V~~~g~-~--~~~~~l~~~aD~vV~~sg------~ 354 (462)
+.+.+. .++++++++ |.+. .. .. .++++++..+|.+.|. + +++.++|+.||+++.++. +
T Consensus 208 ~~~~~~---~~~~~l~i~-G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~ 283 (366)
T cd03822 208 PLLVAK---HPDVRLLVA-GETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQS 283 (366)
T ss_pred HHHHhh---CCCeEEEEe-ccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccc
Confidence 444431 467776654 5432 11 11 2667788899999976 4 689999999999997652 6
Q ss_pred hhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeee--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHH
Q 012492 355 GTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFT--RSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVD 432 (462)
Q Consensus 355 ~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~--~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ 432 (462)
++++|||++|+|+|+++.++ . ..+.+.+.|+++ .+++++++++.+++ +|++.+++|+++++++++.+++++
T Consensus 284 ~~~~Ea~a~G~PvI~~~~~~-~-----~~i~~~~~g~~~~~~d~~~~~~~l~~l~-~~~~~~~~~~~~~~~~~~~~s~~~ 356 (366)
T cd03822 284 GVLAYAIGFGKPVISTPVGH-A-----EEVLDGGTGLLVPPGDPAALAEAIRRLL-ADPELAQALRARAREYARAMSWER 356 (366)
T ss_pred hHHHHHHHcCCCEEecCCCC-h-----heeeeCCCcEEEcCCCHHHHHHHHHHHH-cChHHHHHHHHHHHHHHhhCCHHH
Confidence 78999999999999998754 2 234455667666 46899999999999 799999999999999998899999
Q ss_pred HHHHHHHHHh
Q 012492 433 IVKDIHDLAA 442 (462)
Q Consensus 433 ia~~i~~l~~ 442 (462)
+++.+.++++
T Consensus 357 ~~~~~~~~~~ 366 (366)
T cd03822 357 VAERYLRLLA 366 (366)
T ss_pred HHHHHHHHhC
Confidence 9999998763
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.3e-22 Score=203.23 Aligned_cols=275 Identities=15% Similarity=0.094 Sum_probs=179.6
Q ss_pred HHHHHHHh--hCCCEEEECCcccchHHHHHHHHc-CCCCCCeEEEEecCCCCC--Cc-----------------c--c--
Q 012492 155 EVEAGLME--YKPDIIISVHPLMQHIPLWVLKWQ-GLQKKVIFVTVITDLNTC--HP-----------------T--W-- 208 (462)
Q Consensus 155 ~l~~~l~~--~kPDvVi~~~~~~~~~~~~~~~~~-~~~~~iP~v~~~~d~~~~--~~-----------------~--~-- 208 (462)
.+.+++++ ++||+||++....+.++..+.+.. ....++|+|..+|..... .+ . +
T Consensus 107 ~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (466)
T PRK00654 107 AAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYG 186 (466)
T ss_pred HHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCC
Confidence 33444444 599999999754444333333220 001278999888865310 00 0 0
Q ss_pred -------ccCCCcEEEEcCHHHHHHHHHc----------CCCCCcEEEcCCCCChhhhcccCC-----------------
Q 012492 209 -------FHPRVNRCYCPSKEVAKRASYF----------GLEVSQIRVFGLPIRPSFVRAVIS----------------- 254 (462)
Q Consensus 209 -------~~~~~d~~i~~s~~~~~~l~~~----------gi~~~~i~v~g~pv~~~~~~~~~~----------------- 254 (462)
....+|.++++|+..++.+... +.+++++.+++|+++.+.+.+..+
T Consensus 187 ~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~ 266 (466)
T PRK00654 187 QISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAE 266 (466)
T ss_pred cccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHH
Confidence 1245789999999988887642 124578999999999876554211
Q ss_pred -hHHHHHHcCCCC-CCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH-HHHHHHhhc--cCCCCe
Q 012492 255 -KDNLRLELQMDP-ILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR-TLASTLQSE--EWKIPV 329 (462)
Q Consensus 255 -~~~~r~~l~l~~-~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~-~l~~~~~~~--~~~~~V 329 (462)
+..+++++|+++ +.++++++|+....|++..+++++ +.+.+ .+++++++ |.+. .+.+.++++ ....++
T Consensus 267 ~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~-~~l~~-----~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v 339 (466)
T PRK00654 267 NKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEAL-PELLE-----QGGQLVLL-GTGDPELEEAFRALAARYPGKV 339 (466)
T ss_pred HHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHH-HHHHh-----cCCEEEEE-ecCcHHHHHHHHHHHHHCCCcE
Confidence 346788899975 566666666555556666666555 44433 25676655 5442 233333322 123456
Q ss_pred E-Eeccchh-HHHHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHC------CceeeeC--C
Q 012492 330 K-VRGFETQ-MEKWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDN------GAGVFTR--S 395 (462)
Q Consensus 330 ~-~~g~~~~-~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~------G~g~~~~--~ 395 (462)
. +.|+.++ +..+|+.||++|.+|- |.+++|||++|+|+|+++.++-.+. +.+. +.|++++ +
T Consensus 340 ~~~~g~~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~-----v~~~~~~~~~~~G~lv~~~d 414 (466)
T PRK00654 340 GVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADT-----VIDYNPEDGEATGFVFDDFN 414 (466)
T ss_pred EEEEeCCHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccce-----eecCCCCCCCCceEEeCCCC
Confidence 5 4677644 5689999999999873 8999999999999999987543221 2222 5677764 7
Q ss_pred HHHHHHHHHHHhc--CCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 396 PKETARIVTEWFS--TKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 396 ~~~la~~i~~ll~--~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
+++++++|.+++. .+++.+++|++++.+ ..++|+++++.++++.++
T Consensus 415 ~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 415 AEDLLRALRRALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYLELYRR 462 (466)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHHH
Confidence 8999999998872 267778889888753 689999999999998764
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-21 Score=191.34 Aligned_cols=333 Identities=14% Similarity=0.112 Sum_probs=211.5
Q ss_pred eEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhHH
Q 012492 64 NVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSC 143 (462)
Q Consensus 64 kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~ 143 (462)
||++++... +|+......++++|.+.|+ ++.+........ ..... .. + ..+...........
T Consensus 1 kIl~i~~~~-~g~~~~~~~l~~~L~~~g~---~v~~~~~~~~~~----~~~~~-~~--~---~~~~~~~~~~~~~~---- 62 (359)
T cd03808 1 KILHIVTVD-GGLYSFRLPLIKALRAAGY---EVHVVAPPGDEL----EELEA-LG--V---KVIPIPLDRRGINP---- 62 (359)
T ss_pred CeeEEEecc-hhHHHHHHHHHHHHHhcCC---eeEEEecCCCcc----ccccc-CC--c---eEEeccccccccCh----
Confidence 689998885 5999999999999988875 334332111100 00000 00 0 00000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCc-------------cccc
Q 012492 144 YLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHP-------------TWFH 210 (462)
Q Consensus 144 ~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~-------------~~~~ 210 (462)
.........+.+.+++.+||+|+++...........++.. ...+++...|+...... .+..
T Consensus 63 ---~~~~~~~~~~~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (359)
T cd03808 63 ---FKDLKALLRLYRLLRKERPDIVHTHTPKPGILGRLAARLA---GVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLAL 136 (359)
T ss_pred ---HhHHHHHHHHHHHHHhcCCCEEEEccccchhHHHHHHHHc---CCCCEEEEecCcchhhccchhHHHHHHHHHHHHH
Confidence 0112334466788999999999998765443322333322 24566666665431110 1234
Q ss_pred CCCcEEEEcCHHHHHHHHHcCCC--CCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHH
Q 012492 211 PRVNRCYCPSKEVAKRASYFGLE--VSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAM 288 (462)
Q Consensus 211 ~~~d~~i~~s~~~~~~l~~~gi~--~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~ 288 (462)
+.+|.+++.|+...+.+.+.+.. ..++.+.+++++.......... .+++.+.++++|+....++...+++
T Consensus 137 ~~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~i~~~G~~~~~k~~~~li~ 208 (359)
T cd03808 137 RFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEP--------IPEDDPVFLFVARLLKDKGIDELLE 208 (359)
T ss_pred hhccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccc--------cCCCCcEEEEEeccccccCHHHHHH
Confidence 56799999999999998877654 3567778888877655431110 1234455555555444555555554
Q ss_pred HHHHhhhcccCCCCCceEEEEccCCHH--HHHH-HhhccCCCCeEEeccchhHHHHHHhcchheecCC----hhhHHHHH
Q 012492 289 ALGESLLDKETGRPIGQLIIICGRNRT--LAST-LQSEEWKIPVKVRGFETQMEKWMGACDCIITKAG----PGTIAEAL 361 (462)
Q Consensus 289 ~l~~~l~~~~~~~~~~~~lvv~G~~~~--l~~~-~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg----~~t~~EAl 361 (462)
.+ +.+.+ ..++++++++++.... .... +.+.+...+|.+.|+.+++.++|+.||+++.++. |++++|||
T Consensus 209 ~~-~~l~~---~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~ 284 (359)
T cd03808 209 AA-RILKA---KGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAADVFVLPSYREGLPRVLLEAM 284 (359)
T ss_pred HH-HHHHh---cCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeeccccHHHHHHhccEEEecCcccCcchHHHHHH
Confidence 44 55543 2467776654433322 1121 4555667899999999999999999999998874 89999999
Q ss_pred HhCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhh-cCCcHHHHHHHHHH
Q 012492 362 IRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKL-AQPEAVVDIVKDIH 438 (462)
Q Consensus 362 a~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~-~~~~~~~~ia~~i~ 438 (462)
++|+|+|+++.++. .+.+.+.+.|++++ +++++++++.+++ .|++.+++|++++++. .+.++++.+++.+.
T Consensus 285 ~~G~Pvi~s~~~~~-----~~~i~~~~~g~~~~~~~~~~~~~~i~~l~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 285 AMGRPVIATDVPGC-----REAVIDGVNGFLVPPGDAEALADAIERLI-EDPELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HcCCCEEEecCCCc-----hhhhhcCcceEEECCCCHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 99999999986432 23444455677764 6899999999999 7999999999999988 67899999998775
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.2e-21 Score=188.03 Aligned_cols=328 Identities=12% Similarity=0.040 Sum_probs=212.6
Q ss_pred eEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhHH
Q 012492 64 NVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSC 143 (462)
Q Consensus 64 kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~ 143 (462)
||++++.....|.......++++|.++|+ +|.+....+......... +..... . . ...
T Consensus 1 ki~~~~~~~~~~~~~~~~~~~~~L~~~g~---~v~v~~~~~~~~~~~~~~----~~~~~~--~---~-------~~~--- 58 (355)
T cd03799 1 KIAYLVKEFPRLSETFILREILALEAAGH---EVEIFSLRPPEDTLVHPE----DRAELA--R---T-------RYL--- 58 (355)
T ss_pred CEEEECCCCCCcchHHHHHHHHHHHhCCC---eEEEEEecCccccccccc----cccccc--c---h-------HHH---
Confidence 69999988766788888999999999885 444433221111100000 000000 0 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCc------ccccCCCcEEE
Q 012492 144 YLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHP------TWFHPRVNRCY 217 (462)
Q Consensus 144 ~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~------~~~~~~~d~~i 217 (462)
...+........+.+.+++.+||+|+++.+..........+.. .++|++...|....... .+..+.+|.++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 135 (355)
T cd03799 59 ARSLALLAQALVLARELRRLGIDHIHAHFGTTPATVAMLASRL---GGIPYSFTAHGKDIFRSPDAIDLDEKLARADFVV 135 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHHh---cCCCEEEEEecccccccCchHHHHHHHhhCCEEE
Confidence 0011122344456677889999999998865433322333322 36888877764431111 12345689999
Q ss_pred EcCHHHHHHHHHc-CCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhc
Q 012492 218 CPSKEVAKRASYF-GLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLD 296 (462)
Q Consensus 218 ~~s~~~~~~l~~~-gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~ 296 (462)
+.|+..++.+.+. +.+..++.+++|+++...+.... ...+.+...++.+|+....++...++..+ +.+.+
T Consensus 136 ~~s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~--------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~-~~l~~ 206 (355)
T cd03799 136 AISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRP--------PPPPGEPLRILSVGRLVEKKGLDYLLEAL-ALLKD 206 (355)
T ss_pred ECCHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCcc--------ccccCCCeEEEEEeeeccccCHHHHHHHH-HHHhh
Confidence 9999999998876 67778999999999876654311 01123344455555444445555555544 45543
Q ss_pred ccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecC----------ChhhHHHHH
Q 012492 297 KETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKA----------GPGTIAEAL 361 (462)
Q Consensus 297 ~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~s----------g~~t~~EAl 361 (462)
. .+++++++ +|.+. .+.+.+++++...+|.+.|+. +++..+|+.||++++++ .|++++|||
T Consensus 207 ~---~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~ 282 (355)
T cd03799 207 R---GIDFRLDI-VGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAM 282 (355)
T ss_pred c---CCCeEEEE-EECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHH
Confidence 2 35677655 45443 345556666778899999998 78999999999999754 378999999
Q ss_pred HhCCCEEEecCCCCccccchHHHHHCC-ceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc-CCcHHHHHHHH
Q 012492 362 IRGLPIILNDYIPGQEKGNVPYVVDNG-AGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLA-QPEAVVDIVKD 436 (462)
Q Consensus 362 a~G~PvI~~~~~~~~~~~n~~~l~~~G-~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~-~~~~~~~ia~~ 436 (462)
++|+|+|+++.+... .+.+.+ .|+++. ++++++++|.+++ ++++.+.+|++++++.+ ..++++..++.
T Consensus 283 a~G~Pvi~~~~~~~~------~~i~~~~~g~~~~~~~~~~l~~~i~~~~-~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 283 AMGLPVISTDVSGIP------ELVEDGETGLLVPPGDPEALADAIERLL-DDPELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred HcCCCEEecCCCCcc------hhhhCCCceEEeCCCCHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 999999998864322 234444 777775 7899999999999 79999999999999876 46888887764
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.5e-22 Score=198.84 Aligned_cols=265 Identities=15% Similarity=0.029 Sum_probs=173.0
Q ss_pred HHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC---CCc---------------ccccCCCcEEEEcC
Q 012492 159 GLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT---CHP---------------TWFHPRVNRCYCPS 220 (462)
Q Consensus 159 ~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~---~~~---------------~~~~~~~d~~i~~s 220 (462)
..+..+||+|+++..... . .+.+.. .+.|+|.+.|.... ... .|..+.+|.++++|
T Consensus 89 ~~~~~~~Dvi~~~~~~~~-~--~~~~~~---~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s 162 (392)
T cd03805 89 LLPDEKYDVFIVDQVSAC-V--PLLKLF---SPSKILFYCHFPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNS 162 (392)
T ss_pred hcccCCCCEEEEcCcchH-H--HHHHHh---cCCcEEEEEecChHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcC
Confidence 356779999998764332 2 222322 24787766652210 000 12356789999999
Q ss_pred HHHHHHHHHc-C-CCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhccc
Q 012492 221 KEVAKRASYF-G-LEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKE 298 (462)
Q Consensus 221 ~~~~~~l~~~-g-i~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~ 298 (462)
+..++.+.+. + .+..++.+++|+++.+.+.+... +..++....+++.++++.+|.....++...+++++ +.+.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~-~~~~~~~~~~~~~~~i~~~grl~~~Kg~~~ll~a~-~~l~~~~ 240 (392)
T cd03805 163 NFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSE-DPDPGLLIPKSGKKTFLSINRFERKKNIALAIEAF-AILKDKL 240 (392)
T ss_pred hhHHHHHHHHhcccccCCcceeCCCcCHHHcCcccc-cccccccccCCCceEEEEEeeecccCChHHHHHHH-HHHHhhc
Confidence 9998877653 3 33334558899998776543211 11222334445555555555444445565555544 5554421
Q ss_pred CCCCCceEEEEccCC----------HHHHHHHhh-ccCCCCeEEeccc--hhHHHHHHhcchheecCC----hhhHHHHH
Q 012492 299 TGRPIGQLIIICGRN----------RTLASTLQS-EEWKIPVKVRGFE--TQMEKWMGACDCIITKAG----PGTIAEAL 361 (462)
Q Consensus 299 ~~~~~~~~lvv~G~~----------~~l~~~~~~-~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg----~~t~~EAl 361 (462)
...++++++++++.. .++.+.+++ +++.++|.|.|++ +++..+|+.||+++.+|. |.+++|||
T Consensus 241 ~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAm 320 (392)
T cd03805 241 AEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAM 320 (392)
T ss_pred ccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHH
Confidence 001577766654332 234555666 6788999999998 567899999999998763 88999999
Q ss_pred HhCCCEEEecCCCCccccchHHHHHCCceeeeC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc-CCcHHHHHHHHH
Q 012492 362 IRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR-SPKETARIVTEWFSTKTDELKRMSENALKLA-QPEAVVDIVKDI 437 (462)
Q Consensus 362 a~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~-~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~-~~~~~~~ia~~i 437 (462)
++|+|+|+++.++.. +.+.+.+.|++++ ++++++++|.+++ ++++.+++|++++++.+ +.++++.+++.+
T Consensus 321 a~G~PvI~s~~~~~~-----e~i~~~~~g~~~~~~~~~~a~~i~~l~-~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 321 YAGKPVIACNSGGPL-----ETVVDGETGFLCEPTPEEFAEAMLKLA-NDPDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HcCCCEEEECCCCcH-----HHhccCCceEEeCCCHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 999999999864322 2344445677664 7899999999999 79999999999999876 678999888753
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-21 Score=194.03 Aligned_cols=260 Identities=12% Similarity=0.111 Sum_probs=178.9
Q ss_pred hCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccccCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCC
Q 012492 163 YKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGL 242 (462)
Q Consensus 163 ~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~ 242 (462)
.++|+|+++...... ..+.+. ..+.|+|...|+.. .+ ......+.++++|+..++.+.+ +++..++.+++|
T Consensus 98 ~~~~vi~v~~~~~~~--~~~~~~---~~~~~~v~~~h~~~--~~-~~~~~~~~ii~~S~~~~~~~~~-~~~~~~i~vIpn 168 (380)
T PRK15484 98 TKDSVIVIHNSMKLY--RQIRER---APQAKLVMHMHNAF--EP-ELLDKNAKIIVPSQFLKKFYEE-RLPNADISIVPN 168 (380)
T ss_pred CCCcEEEEeCcHHhH--HHHHhh---CCCCCEEEEEeccc--Ch-hHhccCCEEEEcCHHHHHHHHh-hCCCCCEEEecC
Confidence 568998887644211 122222 14678887666542 11 1234678999999999877765 356678999999
Q ss_pred CCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCC-------HH
Q 012492 243 PIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRN-------RT 315 (462)
Q Consensus 243 pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~-------~~ 315 (462)
+++...+.+ ......+++++++++.++++++|+....+++..+++++ +.+.+ ..|+++++++++.. ..
T Consensus 169 gvd~~~~~~-~~~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~-~~l~~---~~p~~~lvivG~g~~~~~~~~~~ 243 (380)
T PRK15484 169 GFCLETYQS-NPQPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAF-EKLAT---AHSNLKLVVVGDPTASSKGEKAA 243 (380)
T ss_pred CCCHHHcCC-cchHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHH-HHHHH---hCCCeEEEEEeCCccccccchhH
Confidence 998765543 23455677888876666555554444455666666555 44543 25788766554321 11
Q ss_pred HHHHHhhc--cCCCCeEEeccc--hhHHHHHHhcchheecCC-----hhhHHHHHHhCCCEEEecCCCCccccchHHHHH
Q 012492 316 LASTLQSE--EWKIPVKVRGFE--TQMEKWMGACDCIITKAG-----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVD 386 (462)
Q Consensus 316 l~~~~~~~--~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg-----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~ 386 (462)
+.+.++++ .+..++.|.|++ +++.++|+.||++|.+|. +++++|||++|+|+|+++.++ ..+.+.+
T Consensus 244 ~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg-----~~Eiv~~ 318 (380)
T PRK15484 244 YQKKVLEAAKRIGDRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG-----ITEFVLE 318 (380)
T ss_pred HHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCC-----cHhhccc
Confidence 23333322 344689999997 589999999999998873 789999999999999998643 2233444
Q ss_pred CCceeee---CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc-CCcHHHHHHHHHHHHHhc
Q 012492 387 NGAGVFT---RSPKETARIVTEWFSTKTDELKRMSENALKLA-QPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 387 ~G~g~~~---~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~-~~~~~~~ia~~i~~l~~~ 443 (462)
...|+.+ .++++++++|.+++ +|++. .+|++++++.+ +.++|+.+++.+++++++
T Consensus 319 ~~~G~~l~~~~d~~~la~~I~~ll-~d~~~-~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 319 GITGYHLAEPMTSDSIISDINRTL-ADPEL-TQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred CCceEEEeCCCCHHHHHHHHHHHH-cCHHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4467633 37899999999999 78875 67999998765 689999999999998864
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.4e-21 Score=194.26 Aligned_cols=360 Identities=13% Similarity=0.055 Sum_probs=216.4
Q ss_pred CCCCCCeEEEEec--CCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchh-hHHHHH-HHHhh------hHH
Q 012492 58 GAERTKNVLILMS--DTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLND-MERSYK-FMVKH------VQL 127 (462)
Q Consensus 58 ~~~~~~kIli~~~--~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~-~~~~y~-~~~~~------~~l 127 (462)
+.+++++|+|+.+ +.|||-++.....+.+|++.+++. .+.+-+. +..+.. .. +.+.-. +-++. +.+
T Consensus 29 ~~~~~~~v~f~HP~~~~ggG~ERvl~~a~~~l~~~~~~~-~v~iyt~--~~d~~~-~~~l~~~~~~~~i~~~~~~~~v~l 104 (463)
T PLN02949 29 RRSRKRAVGFFHPYTNDGGGGERVLWCAVRAIQEENPDL-DCVIYTG--DHDASP-DSLAARARDRFGVELLSPPKVVHL 104 (463)
T ss_pred ccCCCcEEEEECCCCCCCCChhhHHHHHHHHHHhhCCCC-eEEEEcC--CCCCCH-HHHHHHHHhhcceecCCCceEEEe
Confidence 4456779999985 467799999999999999998753 3332210 000000 11 000000 00000 000
Q ss_pred -HHHHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCC--
Q 012492 128 -WKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTC-- 204 (462)
Q Consensus 128 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~-- 204 (462)
..........+.+ ++... +........+.+.+..||+++-+.++...+| +++. .+.|++.++|-....
T Consensus 105 ~~~~~~~~~~~~~~-t~~~~--~~~~~~l~~~~~~~~~p~v~vDt~~~~~~~p--l~~~----~~~~v~~yvH~p~~~~d 175 (463)
T PLN02949 105 RKRKWIEEETYPRF-TMIGQ--SLGSVYLAWEALCKFTPLYFFDTSGYAFTYP--LARL----FGCKVVCYTHYPTISSD 175 (463)
T ss_pred ccccccccccCCce-ehHHH--HHHHHHHHHHHHHhcCCCEEEeCCCcccHHH--HHHh----cCCcEEEEEeCCcchHH
Confidence 0000000000011 11111 1111112223344568887776666554443 3443 368999888832100
Q ss_pred -------------------Ccc------------------cccCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChh
Q 012492 205 -------------------HPT------------------WFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPS 247 (462)
Q Consensus 205 -------------------~~~------------------~~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~ 247 (462)
... +....+|.++++|+.+++.+.+....++++.++++|++..
T Consensus 176 m~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~ 255 (463)
T PLN02949 176 MISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTS 255 (463)
T ss_pred HHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHH
Confidence 000 1125679999999999988877533345788899988754
Q ss_pred hhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhccc-CCCCCceEEEEccCC----H----HHHH
Q 012492 248 FVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKE-TGRPIGQLIIICGRN----R----TLAS 318 (462)
Q Consensus 248 ~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~-~~~~~~~~lvv~G~~----~----~l~~ 318 (462)
.+.. ...+ -+++.+.++.+|.....|+...+++++.+ +.++. ...+++++++++|.. . ++++
T Consensus 256 ~~~~-~~~~-------~~~~~~~il~vGR~~~~Kg~~llI~A~~~-l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~ 326 (463)
T PLN02949 256 GLQA-LPLE-------RSEDPPYIISVAQFRPEKAHALQLEAFAL-ALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKD 326 (463)
T ss_pred Hccc-CCcc-------ccCCCCEEEEEEeeeccCCHHHHHHHHHH-HHHhccccCCCcEEEEEeCCCCcccHHHHHHHHH
Confidence 3221 0100 11234556666554455666666665543 32211 113577766554421 1 2555
Q ss_pred HHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHH--CC-c
Q 012492 319 TLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVD--NG-A 389 (462)
Q Consensus 319 ~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~--~G-~ 389 (462)
.++++++.++|.|.|++ +++.++|+.||+++.++. |.+++|||++|+|+|+++.++...+ .+.+ .| .
T Consensus 327 la~~l~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~e----IV~~~~~g~t 402 (463)
T PLN02949 327 RAKELGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMD----IVLDEDGQQT 402 (463)
T ss_pred HHHHcCCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcce----eeecCCCCcc
Confidence 66677888999999998 789999999999998763 8999999999999999987542111 1111 13 5
Q ss_pred eeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 390 GVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 390 g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
|++++++++++++|.++++++++.+++|++++++.+++++++++++.+++.+.+
T Consensus 403 G~l~~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~ 456 (463)
T PLN02949 403 GFLATTVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRP 456 (463)
T ss_pred cccCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 777889999999999999446888999999999999899999999999887753
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.90 E-value=8e-22 Score=196.73 Aligned_cols=268 Identities=16% Similarity=0.104 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHHhhCCCEEEECCcccchHH-HHHHHHcCCCCCCeEEEEecCCCC---CC-----cccccCCCcEEEEcC
Q 012492 150 AYYAKEVEAGLMEYKPDIIISVHPLMQHIP-LWVLKWQGLQKKVIFVTVITDLNT---CH-----PTWFHPRVNRCYCPS 220 (462)
Q Consensus 150 ~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~-~~~~~~~~~~~~iP~v~~~~d~~~---~~-----~~~~~~~~d~~i~~s 220 (462)
.....++.+.+++++||+|++++......+ ..+++. .++|++++.+...+ .. ..+..+.+|.+++++
T Consensus 74 ~~~~~~l~~~l~~~~pDvV~~~g~~~~~~~~~~aa~~----~~iPvv~~~~g~~s~~~~~~~~~~r~~~~~~ad~~~~~s 149 (363)
T cd03786 74 AGLLIGLEAVLLEEKPDLVLVLGDTNETLAAALAAFK----LGIPVAHVEAGLRSFDRGMPDEENRHAIDKLSDLHFAPT 149 (363)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHH----cCCCEEEEecccccCCCCCCchHHHHHHHHHhhhccCCC
Confidence 344567778899999999999875433332 233443 48999876543211 01 112345679999999
Q ss_pred HHHHHHHHHcCCCCCcEEEcCCCCChhhhc-ccCCh-HHHHHHcCCCCCCcEEEEEeCCCCC----ccHHHHHHHHHHhh
Q 012492 221 KEVAKRASYFGLEVSQIRVFGLPIRPSFVR-AVISK-DNLRLELQMDPILPAVLLMGGGEGM----GPVKETAMALGESL 294 (462)
Q Consensus 221 ~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~-~~~~~-~~~r~~l~l~~~~~~iLv~gG~~~~----~~~~~~l~~l~~~l 294 (462)
+..++.+.+.|+++++|.++|||+.+.+.. ....+ ...++.++++ +++++++++|+... +.+..++.++ +.+
T Consensus 150 ~~~~~~l~~~G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~-~~~~vlv~~~r~~~~~~~k~~~~l~~al-~~l 227 (363)
T cd03786 150 EEARRNLLQEGEPPERIFVVGNTMIDALLRLLELAKKELILELLGLL-PKKYILVTLHRVENVDDGEQLEEILEAL-AEL 227 (363)
T ss_pred HHHHHHHHHcCCCcccEEEECchHHHHHHHHHHhhccchhhhhcccC-CCCEEEEEeCCccccCChHHHHHHHHHH-HHH
Confidence 999999999999999999999997544322 11111 2234567775 45667777777653 3344455444 444
Q ss_pred hcccCCCCCceEEEEccCC--HHHHHHHhhccC-CCCeEEeccc--hhHHHHHHhcchheecCChhhHHHHHHhCCCEEE
Q 012492 295 LDKETGRPIGQLIIICGRN--RTLASTLQSEEW-KIPVKVRGFE--TQMEKWMGACDCIITKAGPGTIAEALIRGLPIIL 369 (462)
Q Consensus 295 ~~~~~~~~~~~~lvv~G~~--~~l~~~~~~~~~-~~~V~~~g~~--~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~ 369 (462)
.+ .++.+++..+.. ..+++.+++++. .++|++.|+. +++..+|+.||++|++||+ ++.||+++|+|+|+
T Consensus 228 ~~-----~~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sgg-i~~Ea~~~g~PvI~ 301 (363)
T cd03786 228 AE-----EDVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDSGG-IQEEASFLGVPVLN 301 (363)
T ss_pred Hh-----cCCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEEcCcc-HHhhhhhcCCCEEe
Confidence 32 134444333222 235555555554 5789998754 7899999999999999994 57899999999999
Q ss_pred ecCCCCccccchHHHHHCCceeeeC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHH
Q 012492 370 NDYIPGQEKGNVPYVVDNGAGVFTR-SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDI 437 (462)
Q Consensus 370 ~~~~~~~~~~n~~~l~~~G~g~~~~-~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i 437 (462)
++... ....+.+.|.++.+. +++++++++.+++ +++..++.|. ...+.++.++++|++.+
T Consensus 302 ~~~~~-----~~~~~~~~g~~~~~~~~~~~i~~~i~~ll-~~~~~~~~~~--~~~~~~~~a~~~I~~~l 362 (363)
T cd03786 302 LRDRT-----ERPETVESGTNVLVGTDPEAILAAIEKLL-SDEFAYSLMS--INPYGDGNASERIVEIL 362 (363)
T ss_pred eCCCC-----ccchhhheeeEEecCCCHHHHHHHHHHHh-cCchhhhcCC--CCCCCCCHHHHHHHHHh
Confidence 87421 233567788888776 6899999999999 7888888886 66777788889988875
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.8e-21 Score=198.57 Aligned_cols=275 Identities=18% Similarity=0.124 Sum_probs=181.8
Q ss_pred HHHHHHHH--hhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC--CCcc----------------------
Q 012492 154 KEVEAGLM--EYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT--CHPT---------------------- 207 (462)
Q Consensus 154 ~~l~~~l~--~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~--~~~~---------------------- 207 (462)
+...++++ .++||+||++......++..+.+..+. .++|+|..+|+... ..+.
T Consensus 116 ~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~-~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (473)
T TIGR02095 116 RAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRP-NPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYG 194 (473)
T ss_pred HHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccC-CCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCC
Confidence 33444454 379999999975544443333332210 14899988886531 0010
Q ss_pred ------cccCCCcEEEEcCHHHHHHHHHc----CC------CCCcEEEcCCCCChhhhcccC------------------
Q 012492 208 ------WFHPRVNRCYCPSKEVAKRASYF----GL------EVSQIRVFGLPIRPSFVRAVI------------------ 253 (462)
Q Consensus 208 ------~~~~~~d~~i~~s~~~~~~l~~~----gi------~~~~i~v~g~pv~~~~~~~~~------------------ 253 (462)
.....+|+++++|+..++.+... |+ ++.++.+++|+++.+.+.+..
T Consensus 195 ~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~ 274 (473)
T TIGR02095 195 RVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAE 274 (473)
T ss_pred chHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhh
Confidence 01235788999999988877642 22 346899999999887655421
Q ss_pred ChHHHHHHcCCCC--CCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCC-HHHHHHHhhc--cCCCC
Q 012492 254 SKDNLRLELQMDP--ILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRN-RTLASTLQSE--EWKIP 328 (462)
Q Consensus 254 ~~~~~r~~l~l~~--~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~-~~l~~~~~~~--~~~~~ 328 (462)
.+..+++++|++. +.++++++|+....+++..+++++ +.+.+ .++++++ +|.+ ..+.+.++++ ....+
T Consensus 275 ~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~-~~l~~-----~~~~lvi-~G~g~~~~~~~l~~~~~~~~~~ 347 (473)
T TIGR02095 275 NKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAAL-PELLE-----LGGQLVV-LGTGDPELEEALRELAERYPGN 347 (473)
T ss_pred hHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHH-HHHHH-----cCcEEEE-ECCCCHHHHHHHHHHHHHCCCc
Confidence 1356788899975 667666666555556555555544 55543 2467655 4555 2333344332 23456
Q ss_pred eEEeccc--hhHHHHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHC------CceeeeC--
Q 012492 329 VKVRGFE--TQMEKWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDN------GAGVFTR-- 394 (462)
Q Consensus 329 V~~~g~~--~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~------G~g~~~~-- 394 (462)
+.+.+.. +++..+|+.||+++.+|. |.+++|||++|+|+|+++.++-.+ .+.+. +.|++++
T Consensus 348 v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e-----~v~~~~~~~~~~~G~l~~~~ 422 (473)
T TIGR02095 348 VRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLAD-----TVVDGDPEAESGTGFLFEEY 422 (473)
T ss_pred EEEEEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccc-----eEecCCCCCCCCceEEeCCC
Confidence 7766543 446789999999999873 789999999999999998754322 12222 5677764
Q ss_pred CHHHHHHHHHHHhc---CCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 395 SPKETARIVTEWFS---TKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 395 ~~~~la~~i~~ll~---~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
++++++++|.+++. ++++.+++|++++. .+.++|+++++.++++.++
T Consensus 423 d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 423 DPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHHh
Confidence 78999999998872 28999999998875 3689999999999998763
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=4e-21 Score=190.29 Aligned_cols=261 Identities=16% Similarity=0.120 Sum_probs=179.1
Q ss_pred HHhhCCCEEEECCcccch--HHHHHHHHcCCCCCCeEEEEecCCCCCCc----------------ccccCCCcEEEEcCH
Q 012492 160 LMEYKPDIIISVHPLMQH--IPLWVLKWQGLQKKVIFVTVITDLNTCHP----------------TWFHPRVNRCYCPSK 221 (462)
Q Consensus 160 l~~~kPDvVi~~~~~~~~--~~~~~~~~~~~~~~iP~v~~~~d~~~~~~----------------~~~~~~~d~~i~~s~ 221 (462)
....+||+|++++.+... .....++. .++|++...|+...... .+....++.+++.+.
T Consensus 83 ~~~~~~dii~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 158 (375)
T cd03821 83 LNIREADIVHVHGLWSYPSLAAARAARK----YGIPYVVSPHGMLDPWALPHKALKKRLAWFLFERRLLQAAAAVHATSE 158 (375)
T ss_pred HhCCCCCEEEEecccchHHHHHHHHHHH----hCCCEEEEccccccccccccchhhhHHHHHHHHHHHHhcCCEEEECCH
Confidence 456789999988754322 11222332 47899877776421110 112234677888876
Q ss_pred HHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCC
Q 012492 222 EVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGR 301 (462)
Q Consensus 222 ~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~ 301 (462)
........ +.+..++.+++|+++...+........ ++.++.+++.++++++|+....++...++.++ +.+.++ .
T Consensus 159 ~~~~~~~~-~~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~-~~l~~~---~ 232 (375)
T cd03821 159 QEAAEIRR-LGLKAPIAVIPNGVDIPPFAALPSRGR-RRKFPILPDKRIILFLGRLHPKKGLDLLIEAF-AKLAER---F 232 (375)
T ss_pred HHHHHHHh-hCCcccEEEcCCCcChhccCcchhhhh-hhhccCCCCCcEEEEEeCcchhcCHHHHHHHH-HHhhhh---c
Confidence 66555443 445678999999998765543222222 56677777777777776655556666555544 455442 4
Q ss_pred CCceEEEEccCCH-H----HHHHHhhccCCCCeEEeccch--hHHHHHHhcchheecCC----hhhHHHHHHhCCCEEEe
Q 012492 302 PIGQLIIICGRNR-T----LASTLQSEEWKIPVKVRGFET--QMEKWMGACDCIITKAG----PGTIAEALIRGLPIILN 370 (462)
Q Consensus 302 ~~~~~lvv~G~~~-~----l~~~~~~~~~~~~V~~~g~~~--~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~ 370 (462)
+++++++ +|.+. . +...+++++...+|.+.|+++ ++..+|+.||++|.+|. |++++|||++|+|+|++
T Consensus 233 ~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~ 311 (375)
T cd03821 233 PDWHLVI-AGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTT 311 (375)
T ss_pred CCeEEEE-ECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEc
Confidence 6777655 45432 1 222235667788999999995 89999999999998874 89999999999999999
Q ss_pred cCCCCccccchHHHHHCCceeeeC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHhh-cCCcHHHHHHHHHH
Q 012492 371 DYIPGQEKGNVPYVVDNGAGVFTR-SPKETARIVTEWFSTKTDELKRMSENALKL-AQPEAVVDIVKDIH 438 (462)
Q Consensus 371 ~~~~~~~~~n~~~l~~~G~g~~~~-~~~~la~~i~~ll~~d~~~~~~m~~~a~~~-~~~~~~~~ia~~i~ 438 (462)
+.++. ..+...+.+++++ ++++++++|.+++ ++++.+++|++++++. .+.++++++++.+.
T Consensus 312 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~l~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 312 DKVPW------QELIEYGCGWVVDDDVDALAAALRRAL-ELPQRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred CCCCH------HHHhhcCceEEeCCChHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 86432 2233347777775 4599999999999 7999999999999998 67899999998875
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-21 Score=194.52 Aligned_cols=262 Identities=15% Similarity=0.116 Sum_probs=174.1
Q ss_pred HHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEec----CCCC---CCc----c---------------cccCCC
Q 012492 160 LMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVIT----DLNT---CHP----T---------------WFHPRV 213 (462)
Q Consensus 160 l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~----d~~~---~~~----~---------------~~~~~~ 213 (462)
.+.++||+|++++.+.... .+.+. ..++|+|.+.+ .... ..+ . .....+
T Consensus 83 ~~~~~pdvi~~h~~~~~~~--~l~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 157 (396)
T cd03818 83 AKGFRPDVIVAHPGWGETL--FLKDV---WPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQA 157 (396)
T ss_pred hcCCCCCEEEECCccchhh--hHHHh---CCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhC
Confidence 3557899999998775442 23222 14688886542 1100 000 0 113457
Q ss_pred cEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCC-hHHHHHHcCCCCCCcEEEEEeCCCC-CccHHHHHHHHH
Q 012492 214 NRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVIS-KDNLRLELQMDPILPAVLLMGGGEG-MGPVKETAMALG 291 (462)
Q Consensus 214 d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~-~~~~r~~l~l~~~~~~iLv~gG~~~-~~~~~~~l~~l~ 291 (462)
|.++++|+..++.+.+.. .+++.+++|+++.+.+.+... ....+....++++.++++++|+... .+++..+++++.
T Consensus 158 d~vi~~s~~~~~~~~~~~--~~ki~vI~ngvd~~~f~~~~~~~~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~ 235 (396)
T cd03818 158 DAGVSPTRWQRSTFPAEL--RSRISVIHDGIDTDRLRPDPQARLRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALP 235 (396)
T ss_pred CEEECCCHHHHhhCcHhh--ccceEEeCCCccccccCCCchhhhcccccccCCCCCeEEEEECCCcccccCHHHHHHHHH
Confidence 999999998887664421 368999999998776554211 1112222334456666666665455 466666666553
Q ss_pred HhhhcccCCCCCceEEEEccCC----------H-HHHHHHhhcc---CCCCeEEeccc--hhHHHHHHhcchheecCC--
Q 012492 292 ESLLDKETGRPIGQLIIICGRN----------R-TLASTLQSEE---WKIPVKVRGFE--TQMEKWMGACDCIITKAG-- 353 (462)
Q Consensus 292 ~~l~~~~~~~~~~~~lvv~G~~----------~-~l~~~~~~~~---~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg-- 353 (462)
.+.+ ..|+++++++++.+ . ...+.+++++ ..++|+|.|++ +++..+|+.||++|.+|.
T Consensus 236 -~l~~---~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e 311 (396)
T cd03818 236 -RLLR---ARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQYLALLQVSDVHVYLTYPF 311 (396)
T ss_pred -HHHH---HCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHHHHHHHHhCcEEEEcCccc
Confidence 4443 25788877665422 1 1122233333 24789999998 689999999999998774
Q ss_pred --hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC-c
Q 012492 354 --PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLAQP-E 428 (462)
Q Consensus 354 --~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~-~ 428 (462)
+.+++|||+||+|+|+++.++. .+.+.+...|++++ |+++++++|.+++ +|++.+++|++++++.+.. +
T Consensus 312 ~~~~~llEAmA~G~PVIas~~~g~-----~e~i~~~~~G~lv~~~d~~~la~~i~~ll-~~~~~~~~l~~~ar~~~~~~f 385 (396)
T cd03818 312 VLSWSLLEAMACGCLVVGSDTAPV-----REVITDGENGLLVDFFDPDALAAAVIELL-DDPARRARLRRAARRTALRYD 385 (396)
T ss_pred ccchHHHHHHHCCCCEEEcCCCCc-----hhhcccCCceEEcCCCCHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHhc
Confidence 6789999999999999987432 22333334677764 7999999999999 7999999999999998865 8
Q ss_pred HHHHHHHHHH
Q 012492 429 AVVDIVKDIH 438 (462)
Q Consensus 429 ~~~~ia~~i~ 438 (462)
+++.+++.+.
T Consensus 386 s~~~~~~~~~ 395 (396)
T cd03818 386 LLSVCLPRQL 395 (396)
T ss_pred cHHHHHHHHh
Confidence 9998887764
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.9e-21 Score=192.19 Aligned_cols=259 Identities=19% Similarity=0.193 Sum_probs=175.6
Q ss_pred HhhCCCEEEECCcc-cchHHHHHHHHcCCCCCCeEEEEecCCCCCC---------c-----------ccccCCCcEEEEc
Q 012492 161 MEYKPDIIISVHPL-MQHIPLWVLKWQGLQKKVIFVTVITDLNTCH---------P-----------TWFHPRVNRCYCP 219 (462)
Q Consensus 161 ~~~kPDvVi~~~~~-~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~---------~-----------~~~~~~~d~~i~~ 219 (462)
+..+||+|+++++. ....+....+.. .++|++...||..... . .+....+|.+++.
T Consensus 96 ~~~~~D~v~~~~~~~~~~~~~~~~~~~---~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 172 (394)
T cd03794 96 RRRRPDVIIATSPPLLIALAALLLARL---KGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVI 172 (394)
T ss_pred cccCCCEEEEcCChHHHHHHHHHHHHh---cCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEE
Confidence 48899999999833 222222222221 3789998888753100 0 1234568999999
Q ss_pred CHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCC-CccHHHHHHHHHHhhhccc
Q 012492 220 SKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEG-MGPVKETAMALGESLLDKE 298 (462)
Q Consensus 220 s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~-~~~~~~~l~~l~~~l~~~~ 298 (462)
|+...+.+...+.+..++.+++++++............ +.++..+.+.. ++++.|+.. .++...++.++ +.+.+
T Consensus 173 s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~i~~~G~~~~~k~~~~l~~~~-~~l~~-- 247 (394)
T cd03794 173 SPGMREYLVRRGVPPEKISVIPNGVDLELFKPPPADES-LRKELGLDDKF-VVLYAGNIGRAQGLDTLLEAA-ALLKD-- 247 (394)
T ss_pred CHHHHHHHHhcCCCcCceEEcCCCCCHHHcCCccchhh-hhhccCCCCcE-EEEEecCcccccCHHHHHHHH-HHHhh--
Confidence 99999888766788889999999998876554222221 33344444444 455555555 44455555444 55543
Q ss_pred CCCCCceEEEEccCCHH---HHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC---------hhhHHHHHHhC
Q 012492 299 TGRPIGQLIIICGRNRT---LASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG---------PGTIAEALIRG 364 (462)
Q Consensus 299 ~~~~~~~~lvv~G~~~~---l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg---------~~t~~EAla~G 364 (462)
.++++++ ++|.+.. +.+.+... ...+|.+.|+. +++.++|+.||++|.++. +++++|||++|
T Consensus 248 --~~~~~l~-i~G~~~~~~~~~~~~~~~-~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G 323 (394)
T cd03794 248 --RPDIRFL-IVGDGPEKEELKELAKAL-GLDNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAG 323 (394)
T ss_pred --cCCeEEE-EeCCcccHHHHHHHHHHc-CCCcEEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCC
Confidence 1467655 4565542 22322222 33689999987 689999999999997653 45589999999
Q ss_pred CCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcC-CcHHHHHHHHH
Q 012492 365 LPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLAQ-PEAVVDIVKDI 437 (462)
Q Consensus 365 ~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~-~~~~~~ia~~i 437 (462)
+|+|+++..+..+ .+.+.+.|+++. ++++++++|.+++ +|++.+++|++++++++. .++++.+++.+
T Consensus 324 ~pvi~~~~~~~~~-----~~~~~~~g~~~~~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 324 KPVLASVDGESAE-----LVEEAGAGLVVPPGDPEALAAAILELL-DDPEERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred CcEEEecCCCchh-----hhccCCcceEeCCCCHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 9999998754322 344435666654 7999999999999 799999999999999887 78999998875
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.1e-21 Score=200.48 Aligned_cols=380 Identities=16% Similarity=0.190 Sum_probs=222.5
Q ss_pred cccccchhhhccCCCCCCeEEEEe--c-----------CCCchHHHHHHHHHHHH--------hhhcCCce-EEEEEecc
Q 012492 46 EDDESTVELMQIGAERTKNVLILM--S-----------DTGGGHRASAEAIRDAF--------KIEFGDEY-RIFVKDVC 103 (462)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~kIli~~--~-----------~~G~Gh~~~a~aLa~~L--------~~~g~~~~-~v~v~d~~ 103 (462)
.-+..+.|-+=+.=++.|||++++ + ++| |.......+|++| .++|++.. +|.+.+-.
T Consensus 239 ~p~~~~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtG-Gq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~ 317 (784)
T TIGR02470 239 APDPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTG-GQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRL 317 (784)
T ss_pred CCChhHHHHHHhhCCccceEEEEecccccCCccccCCCCCC-CceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecC
Confidence 345666677777777889999986 2 154 8888888788875 57776432 34443221
Q ss_pred -ccccCCCchh-hHHHHHHHHhhhHHHHHHhhcCC----cchhhHHHHHHHHHHHHHHHHHHHH-h--hCCCEEEECCcc
Q 012492 104 -KEYAGWPLND-MERSYKFMVKHVQLWKVAFHSTS----PKWIHSCYLAAMAAYYAKEVEAGLM-E--YKPDIIISVHPL 174 (462)
Q Consensus 104 -~~~~~~~~~~-~~~~y~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~l~-~--~kPDvVi~~~~~ 174 (462)
+...+..... .+... ......+...++.... .+|+...-....-..+...+.+.+. + .+||+||+++..
T Consensus 318 ~~~~~~~~~~~~~e~~~--~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d 395 (784)
T TIGR02470 318 IPDAEGTTCNQRLEKVY--GTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSD 395 (784)
T ss_pred CCCcccccccccccccc--CCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 1111100000 00000 0000011111111100 1122111111011233444444443 2 369999998865
Q ss_pred cchHHHHHHHHcCCCCCCeEEEEecCCCCC---Cc--c------------------cccCCCcEEEEcCHHHHH----HH
Q 012492 175 MQHIPLWVLKWQGLQKKVIFVTVITDLNTC---HP--T------------------WFHPRVNRCYCPSKEVAK----RA 227 (462)
Q Consensus 175 ~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~---~~--~------------------~~~~~~d~~i~~s~~~~~----~l 227 (462)
.+..+..+++. .+||.+.+.|.+... +. . +....+|.+++.|..... ..
T Consensus 396 ~glva~lla~~----lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v 471 (784)
T TIGR02470 396 GNLVASLLARK----LGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSV 471 (784)
T ss_pred hHHHHHHHHHh----cCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhh
Confidence 54443333433 589988776643210 00 0 122347889998865422 11
Q ss_pred HH----------------cCC--CCCcEEEcCCCCChhhhcccCCh------------------HHHHHHcCC--CCCCc
Q 012492 228 SY----------------FGL--EVSQIRVFGLPIRPSFVRAVISK------------------DNLRLELQM--DPILP 269 (462)
Q Consensus 228 ~~----------------~gi--~~~~i~v~g~pv~~~~~~~~~~~------------------~~~r~~l~l--~~~~~ 269 (462)
.+ .|+ ++.|+.+++++++...+.+.... ...++.+|+ ++++|
T Consensus 472 ~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kp 551 (784)
T TIGR02470 472 GQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKP 551 (784)
T ss_pred hhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCc
Confidence 11 133 45789999999998755431111 112355665 56778
Q ss_pred EEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH--------------HHHHHHhhccCCCCeEEeccc
Q 012492 270 AVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR--------------TLASTLQSEEWKIPVKVRGFE 335 (462)
Q Consensus 270 ~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~--------------~l~~~~~~~~~~~~V~~~g~~ 335 (462)
+|+.+|+....|++..++.++. .++.. .+++++++++|... ++.+.++++++.++|.|.|+.
T Consensus 552 iIl~VGRL~~~KGid~LIeA~~-~l~~l---~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~ 627 (784)
T TIGR02470 552 IIFSMARLDRVKNLTGLVECYG-RSPKL---RELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQ 627 (784)
T ss_pred EEEEEeCCCccCCHHHHHHHHH-HhHhh---CCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCc
Confidence 7777776666677776666653 33221 23567766665421 123345567888999999985
Q ss_pred ---hhHHHHHH----hcchheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHH
Q 012492 336 ---TQMEKWMG----ACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARI 402 (462)
Q Consensus 336 ---~~~~~l~~----~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~ 402 (462)
.+..++|+ .+|+||.+|. |.|++|||+||+|+|+++.++ ..+.+.+...|++++ |+++++++
T Consensus 628 ~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG-----~~EiV~dg~tGfLVdp~D~eaLA~a 702 (784)
T TIGR02470 628 LNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGG-----PLEIIQDGVSGFHIDPYHGEEAAEK 702 (784)
T ss_pred CCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCC-----HHHHhcCCCcEEEeCCCCHHHHHHH
Confidence 34555654 3479998874 999999999999999998743 223344444688775 68999999
Q ss_pred HHHHhc---CCHHHHHHHHHHHHhhc-CCcHHHHHHHHHHHHH
Q 012492 403 VTEWFS---TKTDELKRMSENALKLA-QPEAVVDIVKDIHDLA 441 (462)
Q Consensus 403 i~~ll~---~d~~~~~~m~~~a~~~~-~~~~~~~ia~~i~~l~ 441 (462)
|.++++ .|++.+++|++++++.+ +.++|+.+++.+.++.
T Consensus 703 L~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 703 IVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 987652 59999999999998875 6899999999999876
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-21 Score=207.11 Aligned_cols=265 Identities=12% Similarity=0.045 Sum_probs=180.9
Q ss_pred CCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC---------------------cc------cccCCCcEE
Q 012492 164 KPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH---------------------PT------WFHPRVNRC 216 (462)
Q Consensus 164 kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~---------------------~~------~~~~~~d~~ 216 (462)
.||+||+++...... ...++.. .+||+|...|...... +. +....+|.+
T Consensus 310 ~pDvIHaHyw~sG~a-a~~L~~~---lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~V 385 (1050)
T TIGR02468 310 WPYVIHGHYADAGDS-AALLSGA---LNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIV 385 (1050)
T ss_pred CCCEEEECcchHHHH-HHHHHHh---hCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEE
Confidence 499999986444333 3333322 5899998777442100 00 123457899
Q ss_pred EEcCHHHHHHHHHc--CCC---------------------CCcEEEcCCCCChhhhcccC---C----------------
Q 012492 217 YCPSKEVAKRASYF--GLE---------------------VSQIRVFGLPIRPSFVRAVI---S---------------- 254 (462)
Q Consensus 217 i~~s~~~~~~l~~~--gi~---------------------~~~i~v~g~pv~~~~~~~~~---~---------------- 254 (462)
++.|....+.+.+. +++ ..++.|++++++...+.+.. +
T Consensus 386 IasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~ 465 (1050)
T TIGR02468 386 ITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPP 465 (1050)
T ss_pred EEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccch
Confidence 99998888754332 122 23899999999987555411 0
Q ss_pred -hHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH--------------HHHHH
Q 012492 255 -KDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR--------------TLAST 319 (462)
Q Consensus 255 -~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~--------------~l~~~ 319 (462)
...++ ++..++++++||++|+....|++..+++++. .+.+.. ..+++. + ++|.++ ++.+.
T Consensus 466 ~~~~l~-r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~-~L~~l~-~~~nL~-L-IiG~gdd~d~l~~~~~~~l~~L~~l 540 (1050)
T TIGR02468 466 IWSEIM-RFFTNPRKPMILALARPDPKKNITTLVKAFG-ECRPLR-ELANLT-L-IMGNRDDIDEMSSGSSSVLTSVLKL 540 (1050)
T ss_pred hhHHHH-hhcccCCCcEEEEEcCCccccCHHHHHHHHH-HhHhhc-cCCCEE-E-EEecCchhhhhhccchHHHHHHHHH
Confidence 01222 2334667787877776666677777776664 443211 124444 2 334321 13445
Q ss_pred HhhccCCCCeEEeccc--hhHHHHHHhc----chheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCc
Q 012492 320 LQSEEWKIPVKVRGFE--TQMEKWMGAC----DCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGA 389 (462)
Q Consensus 320 ~~~~~~~~~V~~~g~~--~~~~~l~~~a----D~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~ 389 (462)
++++++.++|.|.|+. +++..+|+.| |+||.+|. |++++|||+||+|||+++.++.. +.+.+...
T Consensus 541 i~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~-----EII~~g~n 615 (1050)
T TIGR02468 541 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPV-----DIHRVLDN 615 (1050)
T ss_pred HHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcH-----HHhccCCc
Confidence 5667888999999985 7899999988 69999873 99999999999999999864322 22333346
Q ss_pred eeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 390 GVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 390 g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
|++++ |+++++++|.+++ +|++.+++|++++++.+..|+|+.+++.+.+.+..
T Consensus 616 GlLVdP~D~eaLA~AL~~LL-~Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~ 670 (1050)
T TIGR02468 616 GLLVDPHDQQAIADALLKLV-ADKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIAS 670 (1050)
T ss_pred EEEECCCCHHHHHHHHHHHh-hCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 77765 7999999999999 79999999999999998899999999999887653
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.6e-21 Score=204.69 Aligned_cols=410 Identities=13% Similarity=0.072 Sum_probs=240.8
Q ss_pred ccCCCcccchHHHHHHHHhcCCCCCCCCCCCcccCCCCCCCcccccchhh---hccCCCCCCeEEEEec------CCCch
Q 012492 5 VAYPKKAVSLTEKVLQRVYGNHSTSSSSNLGCSFDSDDDCEEDDESTVEL---MQIGAERTKNVLILMS------DTGGG 75 (462)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~kIli~~~------~~G~G 75 (462)
..++-.|..+|+.|..+- .+.|..+.+..+..|.|-..++ ...++++.|||+++++ -+| |
T Consensus 431 ~~~~~~a~~lr~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~aKtG-G 499 (977)
T PLN02939 431 KISNNDAKLLREMVWKRD----------GRIREAYLSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAPVAKVG-G 499 (977)
T ss_pred cCChhhHHHHHHHHHhhh----------hhHHHHHHHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEcccccccccc-c
Confidence 344555555666665331 2234444444455555544444 6677778899999983 375 9
Q ss_pred HHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHH----------HH----------HHHhhhHHH------H
Q 012492 76 HRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERS----------YK----------FMVKHVQLW------K 129 (462)
Q Consensus 76 h~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~----------y~----------~~~~~~~l~------~ 129 (462)
-.-.+.+|.++|++.||+ ++|++-.+ ........... +. .....++.| .
T Consensus 500 LaDVv~sLPkAL~~~Ghd-V~VIlP~Y----~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~ 574 (977)
T PLN02939 500 LADVVSGLGKALQKKGHL-VEIVLPKY----DCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHP 574 (977)
T ss_pred HHHHHHHHHHHHHHcCCe-EEEEeCCC----cccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCc
Confidence 999999999999999863 34332211 10000000000 00 000000000 0
Q ss_pred -HHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHh--hCCCEEEECCcccchH-HHHHHHH--cCCCCCCeEEEEecCCCC
Q 012492 130 -VAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLME--YKPDIIISVHPLMQHI-PLWVLKW--QGLQKKVIFVTVITDLNT 203 (462)
Q Consensus 130 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~kPDvVi~~~~~~~~~-~~~~~~~--~~~~~~iP~v~~~~d~~~ 203 (462)
..|.+...-.....+..+ ..+.+...+++.+ ++|||||++....+.+ +++.... .+. .++|+|..+|....
T Consensus 575 ~~fF~R~~iYg~~Dn~~RF--~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~-~~~ktVfTIHNl~y 651 (977)
T PLN02939 575 SKFFWRAQYYGEHDDFKRF--SYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGF-NSARICFTCHNFEY 651 (977)
T ss_pred hhccCCCCCCCCccHHHHH--HHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccC-CCCcEEEEeCCCcC
Confidence 000000000000111111 1233444455654 7999999987665543 2222111 121 46888888886531
Q ss_pred --C-----------------Ccccc----c----------CCCcEEEEcCHHHHHHHHHc---------CCCCCcEEEcC
Q 012492 204 --C-----------------HPTWF----H----------PRVNRCYCPSKEVAKRASYF---------GLEVSQIRVFG 241 (462)
Q Consensus 204 --~-----------------~~~~~----~----------~~~d~~i~~s~~~~~~l~~~---------gi~~~~i~v~g 241 (462)
. ++.++ + -.+|.++++|+..++.+... +.+..++.+|.
T Consensus 652 QG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIl 731 (977)
T PLN02939 652 QGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGIL 731 (977)
T ss_pred CCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEe
Confidence 0 01111 1 13689999999998887642 23457899999
Q ss_pred CCCChhhhcccCC------------------hHHHHHHcCCCC---CCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCC
Q 012492 242 LPIRPSFVRAVIS------------------KDNLRLELQMDP---ILPAVLLMGGGEGMGPVKETAMALGESLLDKETG 300 (462)
Q Consensus 242 ~pv~~~~~~~~~~------------------~~~~r~~l~l~~---~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~ 300 (462)
|+|+...+.+..+ +..+++++|++. +.++|+++|+....|++..++.++ ..+.+
T Consensus 732 NGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~-~~Ll~---- 806 (977)
T PLN02939 732 NGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAI-YKTAE---- 806 (977)
T ss_pred cceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHH-HHHhh----
Confidence 9999876654322 456889999974 456666666655566665555544 34332
Q ss_pred CCCceEEEEccCCH------HHHHHHhhccCCCCeEEeccchhH--HHHHHhcchheecCC----hhhHHHHHHhCCCEE
Q 012492 301 RPIGQLIIICGRNR------TLASTLQSEEWKIPVKVRGFETQM--EKWMGACDCIITKAG----PGTIAEALIRGLPII 368 (462)
Q Consensus 301 ~~~~~~lvv~G~~~------~l~~~~~~~~~~~~V~~~g~~~~~--~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI 368 (462)
+++++++ +|.++ .+.+...+++..++|.|.|+.++. ..+|+.||+||.||. |.+++|||++|+|+|
T Consensus 807 -~dvqLVI-vGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPV 884 (977)
T PLN02939 807 -LGGQFVL-LGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPI 884 (977)
T ss_pred -cCCEEEE-EeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEE
Confidence 3566554 45442 233444456677889999988553 579999999999984 999999999999999
Q ss_pred EecCCCCcccc---chHHH-HHCCceeee--CCHHHHHHHHHHHhc---CCHHHHHHHHHHHHhhcCCcHHHHHHHHHHH
Q 012492 369 LNDYIPGQEKG---NVPYV-VDNGAGVFT--RSPKETARIVTEWFS---TKTDELKRMSENALKLAQPEAVVDIVKDIHD 439 (462)
Q Consensus 369 ~~~~~~~~~~~---n~~~l-~~~G~g~~~--~~~~~la~~i~~ll~---~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~ 439 (462)
+++.++..+.. +...+ .+.+.|+++ .++++++++|.+++. +|++.+++|++++. ...++|+.+++.+++
T Consensus 885 Vs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am--~~dFSWe~~A~qYee 962 (977)
T PLN02939 885 VRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM--NIDFSWDSSASQYEE 962 (977)
T ss_pred EecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH--HhcCCHHHHHHHHHH
Confidence 98875432210 00001 112456665 478899998887762 47999999998764 467999999999888
Q ss_pred HHh
Q 012492 440 LAA 442 (462)
Q Consensus 440 l~~ 442 (462)
+.+
T Consensus 963 LY~ 965 (977)
T PLN02939 963 LYQ 965 (977)
T ss_pred HHH
Confidence 765
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.8e-21 Score=189.30 Aligned_cols=260 Identities=18% Similarity=0.160 Sum_probs=181.0
Q ss_pred HHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCC-Ccc---------------cccCCCcEEEEcCH
Q 012492 158 AGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTC-HPT---------------WFHPRVNRCYCPSK 221 (462)
Q Consensus 158 ~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~-~~~---------------~~~~~~d~~i~~s~ 221 (462)
..+++.+||+|++++...... +. .++|++..+||.... ++. ...+.+|.++++|+
T Consensus 79 ~~~~~~~~Dii~~~~~~~~~~-----~~----~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~ 149 (365)
T cd03809 79 LLLLLLGLDLLHSPHNTAPLL-----RL----RGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSE 149 (365)
T ss_pred HHhhhcCCCeeeecccccCcc-----cC----CCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccH
Confidence 445668999999998765432 22 489999988886421 111 11245799999999
Q ss_pred HHHHHHHHc-CCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCC
Q 012492 222 EVAKRASYF-GLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETG 300 (462)
Q Consensus 222 ~~~~~l~~~-gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~ 300 (462)
...+.+.+. +.+..++.+++++++....... ..+. +.+.....+.+.++++|+....++...+++.+ ..+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~~-~~~~~~--- 223 (365)
T cd03809 150 ATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPP-AEAE-VLRALYLLPRPYFLYVGTIEPRKNLERLLEAF-ARLPAK--- 223 (365)
T ss_pred HHHHHHHHHhCcCHHHEEeeccccCccccCCC-chHH-HHHHhcCCCCCeEEEeCCCccccCHHHHHHHH-HHHHHh---
Confidence 999988775 5567789999999987765542 2221 33344445556555555444445555555544 455442
Q ss_pred CCCceEEEEccCCHH---HHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC----hhhHHHHHHhCCCEEEec
Q 012492 301 RPIGQLIIICGRNRT---LASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG----PGTIAEALIRGLPIILND 371 (462)
Q Consensus 301 ~~~~~~lvv~G~~~~---l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~ 371 (462)
.++++++++++.... ..+.+++.+...+|++.|++ +++.++|+.||+++.++. +.+++|||++|+|+|+++
T Consensus 224 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~ 303 (365)
T cd03809 224 GPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASN 303 (365)
T ss_pred cCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecC
Confidence 235665554433321 22333456778899999999 789999999999998763 788999999999999988
Q ss_pred CCCCccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHH
Q 012492 372 YIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIH 438 (462)
Q Consensus 372 ~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~ 438 (462)
.+...+ .+.+.|..+...+++++++++.+++ +|++.+++|++++++.+..++|+++++.+.
T Consensus 304 ~~~~~e-----~~~~~~~~~~~~~~~~~~~~i~~l~-~~~~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 304 ISSLPE-----VAGDAALYFDPLDPEALAAAIERLL-EDPALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred CCCccc-----eecCceeeeCCCCHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 753222 1223333444457999999999999 799999999999999899999999998875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=4e-20 Score=182.64 Aligned_cols=274 Identities=16% Similarity=0.187 Sum_probs=187.8
Q ss_pred HHHHHHHHHHH--hhCCCEEEECCcccchHHH-HHHHHcCCCCCCeEEEEecCCCCCCc----------ccccCCCcEEE
Q 012492 151 YYAKEVEAGLM--EYKPDIIISVHPLMQHIPL-WVLKWQGLQKKVIFVTVITDLNTCHP----------TWFHPRVNRCY 217 (462)
Q Consensus 151 ~~~~~l~~~l~--~~kPDvVi~~~~~~~~~~~-~~~~~~~~~~~iP~v~~~~d~~~~~~----------~~~~~~~d~~i 217 (462)
.....+.++++ ..+||+|+++.+....... ...+. .++|++...|+...... .+....+|.++
T Consensus 78 ~~~~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~----~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii 153 (377)
T cd03798 78 LAARALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRK----LGIPLVVTLHGSDVNLLPRKRLLRALLRRALRRADAVI 153 (377)
T ss_pred HHHHHHHHHHhcccCCCCEEEEeccchHHHHHHHHHHh----cCCCEEEEeecchhcccCchhhHHHHHHHHHhcCCeEE
Confidence 34456677888 9999999998765544322 22222 46899888887542110 12345689999
Q ss_pred EcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcc
Q 012492 218 CPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDK 297 (462)
Q Consensus 218 ~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~ 297 (462)
+.|+...+.+.+.+.+..++.+++++++...+... ..... .+++.+.+.+.++++|+....++...++..+ +.+.+.
T Consensus 154 ~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~-~~~~~~ 230 (377)
T cd03798 154 AVSEALADELKALGIDPEKVTVIPNGVDTERFSPA-DRAEA-RKLGLPEDKKVILFVGRLVPRKGIDYLIEAL-ARLLKK 230 (377)
T ss_pred eCCHHHHHHHHHhcCCCCceEEcCCCcCcccCCCc-chHHH-HhccCCCCceEEEEeccCccccCHHHHHHHH-HHHHhc
Confidence 99999999988776777899999999987765532 22111 3344555555555555544455565555544 455432
Q ss_pred cCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecC----ChhhHHHHHHhCCCEE
Q 012492 298 ETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKA----GPGTIAEALIRGLPII 368 (462)
Q Consensus 298 ~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~s----g~~t~~EAla~G~PvI 368 (462)
.++++++ ++|.+. .+.+.+++.+...+|.+.|++ +++.++|+.||+++.++ .+.+++|||++|+|+|
T Consensus 231 ---~~~~~l~-i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI 306 (377)
T cd03798 231 ---RPDVHLV-IVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVV 306 (377)
T ss_pred ---CCCeEEE-EEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEE
Confidence 3567655 456543 244555556777899999998 57899999999999775 3889999999999999
Q ss_pred EecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHh-hcCCcHHHHHHHHHHHHHhc
Q 012492 369 LNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALK-LAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 369 ~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~-~~~~~~~~~ia~~i~~l~~~ 443 (462)
+++.+. ..+.+.+.+.|+++. +++++++++.+++ ++++. ++.+++++ ..+.++++.+++.+.+++++
T Consensus 307 ~~~~~~-----~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~-~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 376 (377)
T cd03798 307 ATDVGG-----IPEIITDGENGLLVPPGDPEALAEAILRLL-ADPWL--RLGRAARRRVAERFSWENVAERLLELYRE 376 (377)
T ss_pred EecCCC-----hHHHhcCCcceeEECCCCHHHHHHHHHHHh-cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 987643 223344444566654 7899999999999 67776 45555544 45678999999999988763
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.8e-21 Score=185.84 Aligned_cols=321 Identities=16% Similarity=0.173 Sum_probs=201.5
Q ss_pred eEEEEecCC-CchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhH
Q 012492 64 NVLILMSDT-GGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHS 142 (462)
Q Consensus 64 kIli~~~~~-G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 142 (462)
||++++.+. ++|+...+..++++|.+.|+ ++.+......... .......... . . ..... ...
T Consensus 1 kIl~~~~~~~~gG~~~~~~~l~~~l~~~g~---~v~v~~~~~~~~~--~~~~~~~~~~-~---~-----~~~~~-~~~-- 63 (353)
T cd03811 1 KILFVIPSLGGGGAERVLLNLANGLDKRGY---DVTLVVLRDEGDY--LELLPSNVKL-I---P-----VRVLK-LKS-- 63 (353)
T ss_pred CeEEEeecccCCCcchhHHHHHHHHHhcCc---eEEEEEcCCCCcc--ccccccchhh-h---c-----eeeee-ccc--
Confidence 688888664 56999999999999988875 4444422211000 0000000000 0 0 00000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCEEEECCc-ccchHHHHHHHHcCCCCCCeEEEEecCCCCCCc----------ccccC
Q 012492 143 CYLAAMAAYYAKEVEAGLMEYKPDIIISVHP-LMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHP----------TWFHP 211 (462)
Q Consensus 143 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~-~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~----------~~~~~ 211 (462)
.........+.+++++.+||+|++++. ..... ....+. .++|++.+.|+...... .+...
T Consensus 64 ----~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~-~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (353)
T cd03811 64 ----LRDLLAILRLRRLLRKEKPDVVISHLTTTPNVL-ALLAAR----LGTKLIVWEHNSLSLELKRKLRLLLLIRKLYR 134 (353)
T ss_pred ----ccchhHHHHHHHHHHhcCCCEEEEcCccchhHH-HHHHhh----cCCceEEEEcCcchhhhccchhHHHHHHhhcc
Confidence 011234456778899999999999987 32221 122221 26899988887642111 12346
Q ss_pred CCcEEEEcCHHHHHHHHHc-CCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHH
Q 012492 212 RVNRCYCPSKEVAKRASYF-GLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMAL 290 (462)
Q Consensus 212 ~~d~~i~~s~~~~~~l~~~-gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l 290 (462)
.+|.++++|+...+.+.+. +.+..++.+++++++............ .++.+.+...++.+|+....++...+++.+
T Consensus 135 ~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~ 211 (353)
T cd03811 135 RADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPL---ELGIPPDGPVILAVGRLSPQKGFDTLIRAF 211 (353)
T ss_pred ccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhh---hcCCCCCceEEEEEecchhhcChHHHHHHH
Confidence 7899999999999888776 344678999999998765543211111 334455555555555444345555555444
Q ss_pred HHhhhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCC----hhhHHHHHHh
Q 012492 291 GESLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAG----PGTIAEALIR 363 (462)
Q Consensus 291 ~~~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg----~~t~~EAla~ 363 (462)
+.+.+. .++++++++ |.+. .+.+.+++++...+|.+.|+.+++.++|+.||++|.+|. |++++|||++
T Consensus 212 -~~l~~~---~~~~~l~i~-G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~ 286 (353)
T cd03811 212 -ALLRKE---GPDARLVIL-GDGPLREELEALAKELGLADRVHFLGFQSNPYPYLKAADLFVLSSRYEGFPNVLLEAMAL 286 (353)
T ss_pred -HHhhhc---CCCceEEEE-cCCccHHHHHHHHHhcCCCccEEEecccCCHHHHHHhCCEEEeCcccCCCCcHHHHHHHh
Confidence 555432 356776654 4443 345566677788899999999999999999999998763 8999999999
Q ss_pred CCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHH---HHHHHHHhcCCHHHHHHHHHHHHhh
Q 012492 364 GLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKET---ARIVTEWFSTKTDELKRMSENALKL 424 (462)
Q Consensus 364 G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~l---a~~i~~ll~~d~~~~~~m~~~a~~~ 424 (462)
|+|+|+++.++ ..+.+.+.+.|++++ +++.+ .+.+..++ ++++.+++|++++++.
T Consensus 287 G~PvI~~~~~~-----~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~ 346 (353)
T cd03811 287 GTPVVATDCPG-----PREILEDGENGLLVPVGDEAALAAAALALLDLL-LDPELRERLAAAARER 346 (353)
T ss_pred CCCEEEcCCCC-----hHHHhcCCCceEEECCCCHHHHHHHHHHHHhcc-CChHHHHHHHHHHHHH
Confidence 99999998652 233455556677765 46666 56667777 7888899998855443
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.7e-20 Score=196.56 Aligned_cols=269 Identities=13% Similarity=0.022 Sum_probs=178.9
Q ss_pred hCCCEEEECCcccchHHHHHHHHcC--CCCCCeEEEEecCCCCCC--cccccCCCcEEEEcCHHHHHHHHHcC-CC--CC
Q 012492 163 YKPDIIISVHPLMQHIPLWVLKWQG--LQKKVIFVTVITDLNTCH--PTWFHPRVNRCYCPSKEVAKRASYFG-LE--VS 235 (462)
Q Consensus 163 ~kPDvVi~~~~~~~~~~~~~~~~~~--~~~~iP~v~~~~d~~~~~--~~~~~~~~d~~i~~s~~~~~~l~~~g-i~--~~ 235 (462)
++|||||++.-....++.++.+..+ ...++|+|..+|...... ..+....+|+++++|+..++.+...+ ++ ..
T Consensus 708 ~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~~~n~lk~~l~~AD~ViTVS~tya~EI~~~~~l~~~~~ 787 (1036)
T PLN02316 708 FHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEFGANHIGKAMAYADKATTVSPTYSREVSGNSAIAPHLY 787 (1036)
T ss_pred CCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcccchhHHHHHHHHCCEEEeCCHHHHHHHHhccCcccccC
Confidence 6999999986544333333222111 014689998888643110 11233568999999999998887653 43 37
Q ss_pred cEEEcCCCCChhhhcccC-------------------ChHHHHHHcCCCC-CCcEEEEEeCCCCCccHHHHHHHHHHhhh
Q 012492 236 QIRVFGLPIRPSFVRAVI-------------------SKDNLRLELQMDP-ILPAVLLMGGGEGMGPVKETAMALGESLL 295 (462)
Q Consensus 236 ~i~v~g~pv~~~~~~~~~-------------------~~~~~r~~l~l~~-~~~~iLv~gG~~~~~~~~~~l~~l~~~l~ 295 (462)
++.+++|+|+...+.+.. .+..+++++|++. +.|+++++|+....|++..++.++ ..+.
T Consensus 788 Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al-~~ll 866 (1036)
T PLN02316 788 KFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAI-WRTL 866 (1036)
T ss_pred CEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHH-HHHh
Confidence 899999999876543311 1345788899974 567777777666666655555554 4433
Q ss_pred cccCCCCCceEEEEccCC--HH----HHHHHhhccC--CCCeEEeccchhH--HHHHHhcchheecCC----hhhHHHHH
Q 012492 296 DKETGRPIGQLIIICGRN--RT----LASTLQSEEW--KIPVKVRGFETQM--EKWMGACDCIITKAG----PGTIAEAL 361 (462)
Q Consensus 296 ~~~~~~~~~~~lvv~G~~--~~----l~~~~~~~~~--~~~V~~~g~~~~~--~~l~~~aD~vV~~sg----~~t~~EAl 361 (462)
+ .++++++ +|.+ .. +.+...+++. .++|.|.+..++. ..+|+.||+++.||. |.+.+|||
T Consensus 867 ~-----~~~qlVI-vG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAM 940 (1036)
T PLN02316 867 E-----RNGQVVL-LGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAM 940 (1036)
T ss_pred h-----cCcEEEE-EeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHH
Confidence 2 2567655 4543 22 3334444433 5678887666443 379999999999984 99999999
Q ss_pred HhCCCEEEecCCCCccccchHHHHH-------------CCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc-
Q 012492 362 IRGLPIILNDYIPGQEKGNVPYVVD-------------NGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLA- 425 (462)
Q Consensus 362 a~G~PvI~~~~~~~~~~~n~~~l~~-------------~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~- 425 (462)
++|+|+|++..++-.+ .+.+ .+.|++++ ++++++.+|.+++...++.+..|++.+++..
T Consensus 941 a~GtppVvs~vGGL~D-----tV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~ 1015 (1036)
T PLN02316 941 RYGSIPVVRKTGGLFD-----TVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVME 1015 (1036)
T ss_pred HcCCCeEEEcCCCcHh-----hccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 9999999987654222 1221 24677765 6899999999998322456677787777764
Q ss_pred CCcHHHHHHHHHHHHHhc
Q 012492 426 QPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 426 ~~~~~~~ia~~i~~l~~~ 443 (462)
+.++|+.+|+.++++.++
T Consensus 1016 ~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 1016 QDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred hhCCHHHHHHHHHHHHHH
Confidence 579999999999998764
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.4e-21 Score=193.93 Aligned_cols=257 Identities=11% Similarity=0.011 Sum_probs=169.5
Q ss_pred HHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEec------CCCC----------------C------------
Q 012492 159 GLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVIT------DLNT----------------C------------ 204 (462)
Q Consensus 159 ~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~------d~~~----------------~------------ 204 (462)
.+.+++|||+|.+.++....+ +++.. .++|+|.++| |... .
T Consensus 102 ~~~~~~pDv~i~~~g~~~~~~--~~~~~---~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~ 176 (419)
T cd03806 102 ALLKLVPDIFIDTMGYPFTYP--LVRLL---GGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYY 176 (419)
T ss_pred HHHhcCCCEEEEcCCcccHHH--HHHHh---cCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHH
Confidence 344568999999887765443 33332 3789998887 2100 0
Q ss_pred -----CcccccCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCC
Q 012492 205 -----HPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEG 279 (462)
Q Consensus 205 -----~~~~~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~ 279 (462)
...|..+.+|.++++|+..++.+.+.+...+++.++++|++...+.+. .. ....+.+.++.+|+-..
T Consensus 177 ~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~-~~-------~~~~~~~~il~vgr~~~ 248 (419)
T cd03806 177 RLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKL-PL-------DEKTRENQILSIAQFRP 248 (419)
T ss_pred HHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhccc-cc-------ccccCCcEEEEEEeecC
Confidence 001224578999999999998887754333578999999986544321 11 01233455555554444
Q ss_pred CccHHHHHHHHHHhhhcccCC--CCCceEEEEccCC-----H---HHHHHHhhccCCCCeEEeccc--hhHHHHHHhcch
Q 012492 280 MGPVKETAMALGESLLDKETG--RPIGQLIIICGRN-----R---TLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDC 347 (462)
Q Consensus 280 ~~~~~~~l~~l~~~l~~~~~~--~~~~~~lvv~G~~-----~---~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~ 347 (462)
.|+...+++++. .+.+..+. .++++++++++.. . ++++..+++++.++|+|.|++ +++..+|+.||+
T Consensus 249 ~K~~~~li~A~~-~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~l~~adv 327 (419)
T cd03806 249 EKNHPLQLRAFA-KLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEELSTASI 327 (419)
T ss_pred CCCHHHHHHHHH-HHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHHHHhCeE
Confidence 556666666553 44432110 1347766554421 1 244455566788899999996 789999999999
Q ss_pred heecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHH----CCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 012492 348 IITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVD----NGAGVFTRSPKETARIVTEWFSTKTDELKRMSE 419 (462)
Q Consensus 348 vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~----~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~ 419 (462)
+|.++. |.+++|||++|+|+|+++..+..+ .+++ ...|+++.++++++++|.++++++++.++.|++
T Consensus 328 ~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~-----~iv~~~~~g~~G~l~~d~~~la~ai~~ll~~~~~~~~~~~~ 402 (419)
T cd03806 328 GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLL-----DIVVPWDGGPTGFLASTAEEYAEAIEKILSLSEEERLRIRR 402 (419)
T ss_pred EEECCccCCcccHHHHHHHcCCcEEEEcCCCCch-----heeeccCCCCceEEeCCHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 998763 899999999999999988643221 2343 457888889999999999999445566777777
Q ss_pred HHHhhcCCcHHHHHH
Q 012492 420 NALKLAQPEAVVDIV 434 (462)
Q Consensus 420 ~a~~~~~~~~~~~ia 434 (462)
++++..+.++++...
T Consensus 403 ~~~~~~~~fs~~~f~ 417 (419)
T cd03806 403 AARSSVKRFSDEEFE 417 (419)
T ss_pred HHHHHHHhhCHHHhc
Confidence 777777777777653
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.88 E-value=4e-21 Score=194.11 Aligned_cols=270 Identities=14% Similarity=0.155 Sum_probs=183.1
Q ss_pred HHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC--------C---Cccc----------
Q 012492 150 AYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT--------C---HPTW---------- 208 (462)
Q Consensus 150 ~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~--------~---~~~~---------- 208 (462)
..+.+.+.+.+++.++|+|+++++..... ...+. .++|+|.-.+|... . ...|
T Consensus 90 ~~~~~~l~~~~~~~~~D~v~~~~~~~~~~--~~~~~----~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (397)
T TIGR03087 90 RRLARWVNALLAAEPVDAIVVFSSAMAQY--VTPHV----RGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLL 163 (397)
T ss_pred HHHHHHHHHHHhhCCCCEEEEecccccee--ccccc----cCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHHH
Confidence 34556777889999999999987544321 11111 37898866565310 0 0011
Q ss_pred -----ccCCCcEEEEcCHHHHHHHHHcC-CCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCcc
Q 012492 209 -----FHPRVNRCYCPSKEVAKRASYFG-LEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGP 282 (462)
Q Consensus 209 -----~~~~~d~~i~~s~~~~~~l~~~g-i~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~ 282 (462)
..+.+|.++++|+..++.+.+.+ .+..++.+++|+++.+++.+.... . ..++++.++++++|+....++
T Consensus 164 ~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~---~--~~~~~~~~~ilf~G~l~~~k~ 238 (397)
T TIGR03087 164 AYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDY---P--NPYPPGKRVLVFTGAMDYWPN 238 (397)
T ss_pred HHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccc---c--CCCCCCCcEEEEEEecCCccC
Confidence 23468999999999998887653 455789999999998765532111 0 112334555665554433444
Q ss_pred HHHHHH---HHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecC----C-h
Q 012492 283 VKETAM---ALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKA----G-P 354 (462)
Q Consensus 283 ~~~~l~---~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~s----g-~ 354 (462)
...++. .+...+.+ ..|+++++++ |.+.. +.++++....+|+|.|+++++..+|+.||++|.++ | +
T Consensus 239 ~~~l~~~~~~~~~~l~~---~~p~~~l~iv-G~g~~--~~~~~l~~~~~V~~~G~v~~~~~~~~~adv~v~Ps~~~eG~~ 312 (397)
T TIGR03087 239 IDAVVWFAERVFPAVRA---RRPAAEFYIV-GAKPS--PAVRALAALPGVTVTGSVADVRPYLAHAAVAVAPLRIARGIQ 312 (397)
T ss_pred HHHHHHHHHHHHHHHHH---HCCCcEEEEE-CCCCh--HHHHHhccCCCeEEeeecCCHHHHHHhCCEEEecccccCCcc
Confidence 433322 33333433 2478886654 54432 23444455678999999999999999999999775 2 6
Q ss_pred hhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeee-CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc-CCcHHHH
Q 012492 355 GTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFT-RSPKETARIVTEWFSTKTDELKRMSENALKLA-QPEAVVD 432 (462)
Q Consensus 355 ~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~-~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~-~~~~~~~ 432 (462)
++++|||++|+|+|+++..... .....|.|+++ .++++++++|.+++ +|++.+++|++++++++ +.++|+.
T Consensus 313 ~~~lEAma~G~PVV~t~~~~~~------i~~~~~~g~lv~~~~~~la~ai~~ll-~~~~~~~~~~~~ar~~v~~~fsw~~ 385 (397)
T TIGR03087 313 NKVLEAMAMAKPVVASPEAAEG------IDALPGAELLVAADPADFAAAILALL-ANPAEREELGQAARRRVLQHYHWPR 385 (397)
T ss_pred cHHHHHHHcCCCEEecCccccc------ccccCCcceEeCCCHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 6799999999999999863211 11224556655 58999999999999 79999999999999987 5799999
Q ss_pred HHHHHHHHHhc
Q 012492 433 IVKDIHDLAAQ 443 (462)
Q Consensus 433 ia~~i~~l~~~ 443 (462)
+++.+++++++
T Consensus 386 ~~~~~~~~l~~ 396 (397)
T TIGR03087 386 NLARLDALLEQ 396 (397)
T ss_pred HHHHHHHHhcC
Confidence 99999998864
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-20 Score=191.95 Aligned_cols=266 Identities=17% Similarity=0.158 Sum_probs=177.7
Q ss_pred HhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCC--C-----------c-----------------cccc
Q 012492 161 MEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTC--H-----------P-----------------TWFH 210 (462)
Q Consensus 161 ~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~--~-----------~-----------------~~~~ 210 (462)
.+++|||||++....+.++.. ++... ..++|+|..+|+.... . + .+..
T Consensus 130 ~~~~pDIiH~Hdw~~~l~~~~-l~~~~-~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i 207 (485)
T PRK14099 130 PGFVPDIVHAHDWQAGLAPAY-LHYSG-RPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGL 207 (485)
T ss_pred cCCCCCEEEECCcHHHHHHHH-HHhCC-CCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHH
Confidence 468999999988444443332 23221 1368999888875310 0 0 0112
Q ss_pred CCCcEEEEcCHHHHHHHHHc----CC------CCCcEEEcCCCCChhhhcccCC------------------hHHHHHHc
Q 012492 211 PRVNRCYCPSKEVAKRASYF----GL------EVSQIRVFGLPIRPSFVRAVIS------------------KDNLRLEL 262 (462)
Q Consensus 211 ~~~d~~i~~s~~~~~~l~~~----gi------~~~~i~v~g~pv~~~~~~~~~~------------------~~~~r~~l 262 (462)
..+|.++++|+..++.+.+. |+ +++++.+++|+++.+.+.+..+ +..+++++
T Consensus 208 ~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~ 287 (485)
T PRK14099 208 QLADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARF 287 (485)
T ss_pred HhcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHc
Confidence 45789999999999888642 22 3578999999999876654222 34677889
Q ss_pred CCCC--CCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH-HHHHHHhhc--cCCCCe-EEeccch
Q 012492 263 QMDP--ILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR-TLASTLQSE--EWKIPV-KVRGFET 336 (462)
Q Consensus 263 ~l~~--~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~-~l~~~~~~~--~~~~~V-~~~g~~~ 336 (462)
|++. +.++++++|+....|++..+++++ +.+.+ .+++++++ |.+. ++++.++++ ....++ .+.|+.+
T Consensus 288 gl~~~~~~~li~~VgRL~~~KG~d~Li~A~-~~l~~-----~~~~lviv-G~G~~~~~~~l~~l~~~~~~~v~~~~G~~~ 360 (485)
T PRK14099 288 GLDPDPDALLLGVISRLSWQKGLDLLLEAL-PTLLG-----EGAQLALL-GSGDAELEARFRAAAQAYPGQIGVVIGYDE 360 (485)
T ss_pred CCCcccCCcEEEEEecCCccccHHHHHHHH-HHHHh-----cCcEEEEE-ecCCHHHHHHHHHHHHHCCCCEEEEeCCCH
Confidence 9974 345555555545556665555554 44432 24666554 4442 333444332 123455 6899988
Q ss_pred hHHHHH-HhcchheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHC---------CceeeeC--CHHHHH
Q 012492 337 QMEKWM-GACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDN---------GAGVFTR--SPKETA 400 (462)
Q Consensus 337 ~~~~l~-~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~---------G~g~~~~--~~~~la 400 (462)
++..+| +.||+++.+|. |.+.+|||+||+|+|+++.++..+. +.+. +.|++++ |+++++
T Consensus 361 ~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~-----V~~~~~~~~~~~~~~G~l~~~~d~~~La 435 (485)
T PRK14099 361 ALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADT-----VVDANEMAIATGVATGVQFSPVTADALA 435 (485)
T ss_pred HHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccce-----eecccccccccCCCceEEeCCCCHHHHH
Confidence 999987 57999999884 8999999999988888876432221 2221 4577764 789999
Q ss_pred HHHHH---HhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 401 RIVTE---WFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 401 ~~i~~---ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
++|.+ ++ +|++.+++|++++. .+.++|+++++.++++.++
T Consensus 436 ~ai~~a~~l~-~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~ 478 (485)
T PRK14099 436 AALRKTAALF-ADPVAWRRLQRNGM--TTDVSWRNPAQHYAALYRS 478 (485)
T ss_pred HHHHHHHHHh-cCHHHHHHHHHHhh--hhcCChHHHHHHHHHHHHH
Confidence 99987 66 78999999999886 4679999999999887653
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.5e-21 Score=187.23 Aligned_cols=297 Identities=20% Similarity=0.237 Sum_probs=165.1
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcC--Ccchh
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHST--SPKWI 140 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~--~~~~~ 140 (462)
|||+|.+.+.|.||.+++.+||++| +||+ +.+++.+.. ...+...+. . ..++...+... .....
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--rg~~-v~~~~~~~~-------~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~ 66 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--RGHE-VTFITSGPA-------PEFLKPRFP--V--REIPGLGPIQENGRLDRW 66 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--ccCc-eEEEEcCCc-------HHHhccccC--E--EEccCceEeccCCccchH
Confidence 8999999999999999999999999 3652 333333211 111111010 0 00111111100 00001
Q ss_pred hHHHHH----HHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC-cccccCCCcE
Q 012492 141 HSCYLA----AMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH-PTWFHPRVNR 215 (462)
Q Consensus 141 ~~~~~~----~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~-~~~~~~~~d~ 215 (462)
.+.... .......+++.+.+++++||+||+++.... ..+++. .++|++.+.++....+ ..++... .
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDlVIsD~~~~~---~~aa~~----~giP~i~i~~~~~~~~~~~~~~~~--~ 137 (318)
T PF13528_consen 67 KTVRNNIRWLARLARRIRREIRWLREFRPDLVISDFYPLA---ALAARR----AGIPVIVISNQYWFLHPNFWLPWD--Q 137 (318)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEcChHHH---HHHHHh----cCCCEEEEEehHHcccccCCcchh--h
Confidence 111110 011234556778899999999999986653 345554 4899998776553222 1111110 0
Q ss_pred EEEcCHHHHHHHH-HcCCCCCcEEEcCC---CCChhhhcccCChHHHH-HHcCC-CCCCcEEEEEeCCCCCccHHHHHHH
Q 012492 216 CYCPSKEVAKRAS-YFGLEVSQIRVFGL---PIRPSFVRAVISKDNLR-LELQM-DPILPAVLLMGGGEGMGPVKETAMA 289 (462)
Q Consensus 216 ~i~~s~~~~~~l~-~~gi~~~~i~v~g~---pv~~~~~~~~~~~~~~r-~~l~l-~~~~~~iLv~gG~~~~~~~~~~l~~ 289 (462)
......+.+. +..+++.+..+.+. +........ .....++ +.... +.+.+.||++.|+.+.+ +++..
T Consensus 138 ---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~iLv~~gg~~~~---~~~~~ 210 (318)
T PF13528_consen 138 ---DFGRLIERYIDRYHFPPADRRLALSFYPPLPPFFRVP-FVGPIIRPEIRELPPEDEPKILVYFGGGGPG---DLIEA 210 (318)
T ss_pred ---hHHHHHHHhhhhccCCcccceecCCcccccccccccc-ccCchhcccccccCCCCCCEEEEEeCCCcHH---HHHHH
Confidence 0001111111 11122222221111 111110000 0000011 11111 23456788887776654 33333
Q ss_pred HHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccc-hhHHHHHHhcchheecCChhhHHHHHHhCCCEE
Q 012492 290 LGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFE-TQMEKWMGACDCIITKAGPGTIAEALIRGLPII 368 (462)
Q Consensus 290 l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~-~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI 368 (462)
+ +.+ ++.+++++ |..... ....||++.++. +++.++|+.||++|+++|.+|++||+++|+|+|
T Consensus 211 l-~~~-------~~~~~~v~-g~~~~~-------~~~~ni~~~~~~~~~~~~~m~~ad~vIs~~G~~t~~Ea~~~g~P~l 274 (318)
T PF13528_consen 211 L-KAL-------PDYQFIVF-GPNAAD-------PRPGNIHVRPFSTPDFAELMAAADLVISKGGYTTISEALALGKPAL 274 (318)
T ss_pred H-HhC-------CCCeEEEE-cCCccc-------ccCCCEEEeecChHHHHHHHHhCCEEEECCCHHHHHHHHHcCCCEE
Confidence 2 333 45566665 766310 115799999998 899999999999999999999999999999999
Q ss_pred EecCCC-CccccchHHHHHCCceeeeC----CHHHHHHHHHH
Q 012492 369 LNDYIP-GQEKGNVPYVVDNGAGVFTR----SPKETARIVTE 405 (462)
Q Consensus 369 ~~~~~~-~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ 405 (462)
+.|..+ .+|..|++.+.+.|++..++ +++.+.++|++
T Consensus 275 ~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~ 316 (318)
T PF13528_consen 275 VIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLER 316 (318)
T ss_pred EEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhc
Confidence 999863 56778999999999999876 45566665554
|
|
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.3e-21 Score=169.29 Aligned_cols=169 Identities=33% Similarity=0.575 Sum_probs=139.8
Q ss_pred HHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhHHHHHHHHHHHHHH
Q 012492 76 HRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKE 155 (462)
Q Consensus 76 h~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (462)
|.++|.||+++|+++.++..++.+.|++....++....+.+.|..++++.++|+..|+.+..................++
T Consensus 1 H~~aA~Al~eal~~~~~~~~~v~v~D~~~~~~p~~~~~~~~~Y~~~~~~~~ly~~~y~~~~~~~~~~~~~~~~~~~~~~~ 80 (169)
T PF06925_consen 1 HNSAARALAEALERRRGPDAEVEVVDFLEEASPWLRRLIRKAYLFMVRHAPLYGWLYRWTDKRRPRSKFLSALSRLFARR 80 (169)
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEEehHHhhChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHH
Confidence 88999999999998533467899999998767766667788899999888999988887654444333444456677789
Q ss_pred HHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccccCCCcEEEEcCHHHHHHHHHcCCCCC
Q 012492 156 VEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVS 235 (462)
Q Consensus 156 l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~~~~d~~i~~s~~~~~~l~~~gi~~~ 235 (462)
|.++|++++||+|||+||+.+.+++..+|.++...++|+++++||+...|+.|+++.+|++++.|+++++.+.+.|++++
T Consensus 81 l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H~~W~~~~~D~y~Vase~~~~~l~~~Gi~~~ 160 (169)
T PF06925_consen 81 LIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVHPFWIHPGVDRYFVASEEVKEELIERGIPPE 160 (169)
T ss_pred HHHHHhhcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCCcCeecCCCCEEEECCHHHHHHHHHcCCChh
Confidence 99999999999999999998776455455544323799999999996569999999999999999999999999999999
Q ss_pred cEEEcCCCC
Q 012492 236 QIRVFGLPI 244 (462)
Q Consensus 236 ~i~v~g~pv 244 (462)
+|.++|.||
T Consensus 161 ~I~vtGiPV 169 (169)
T PF06925_consen 161 RIHVTGIPV 169 (169)
T ss_pred HEEEeCccC
Confidence 999999986
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.4e-20 Score=182.30 Aligned_cols=254 Identities=18% Similarity=0.114 Sum_probs=170.4
Q ss_pred HHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC----------cccccCCCcEEEEcCHHHHHHHHH
Q 012492 160 LMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH----------PTWFHPRVNRCYCPSKEVAKRASY 229 (462)
Q Consensus 160 l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~----------~~~~~~~~d~~i~~s~~~~~~l~~ 229 (462)
++..+||+|+++++............ .++|.+...|+..... ..+..+.+|.+++.|+...+.+..
T Consensus 79 ~~~~~~Dii~~~~~~~~~~~~~~~~~----~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~ 154 (357)
T cd03795 79 KLAKKADVIHLHFPNPLADLALLLLP----RKKPVVVHWHSDIVKQKLLLKLYRPLQRRFLRRADAIVATSPNYAETSPV 154 (357)
T ss_pred hcCCCCCEEEEecCcchHHHHHHHhc----cCceEEEEEcChhhccchhhhhhhHHHHHHHHhcCEEEeCcHHHHHHHHH
Confidence 66889999999887654332222111 3678887666432110 123346689999999999887766
Q ss_pred cCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEE
Q 012492 230 FGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIII 309 (462)
Q Consensus 230 ~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv 309 (462)
.+-...++.+++|+++...+.... .... .....+.+.+.++.+|+....++...+++++ +.+. +++++ +
T Consensus 155 ~~~~~~~~~~i~~gi~~~~~~~~~-~~~~-~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~-~~l~-------~~~l~-i 223 (357)
T cd03795 155 LRRFRDKVRVIPLGLDPARYPRPD-ALEE-AIWRRAAGRPFFLFVGRLVYYKGLDVLLEAA-AALP-------DAPLV-I 223 (357)
T ss_pred hcCCccceEEecCCCChhhcCCcc-hhhh-HhhcCCCCCcEEEEecccccccCHHHHHHHH-Hhcc-------CcEEE-E
Confidence 543347899999999876554321 1111 2233344556555555444445555555444 4442 45554 4
Q ss_pred ccCCH---HHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecC------ChhhHHHHHHhCCCEEEecCCCCccc
Q 012492 310 CGRNR---TLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKA------GPGTIAEALIRGLPIILNDYIPGQEK 378 (462)
Q Consensus 310 ~G~~~---~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~s------g~~t~~EAla~G~PvI~~~~~~~~~~ 378 (462)
+|.+. .+.+.+++++...+|.+.|++ +++.++|+.||+++.+| .|.+++|||++|+|+|+++.++..
T Consensus 224 ~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~-- 301 (357)
T cd03795 224 VGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGG-- 301 (357)
T ss_pred EeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCch--
Confidence 55554 244455566778899999998 46889999999999765 278999999999999999865432
Q ss_pred cchHHHHH-CCceeee--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcC-CcHHHHHH
Q 012492 379 GNVPYVVD-NGAGVFT--RSPKETARIVTEWFSTKTDELKRMSENALKLAQ-PEAVVDIV 434 (462)
Q Consensus 379 ~n~~~l~~-~G~g~~~--~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~-~~~~~~ia 434 (462)
+.+.+ .+.|+.+ .|+++++++|..++ +|++.+++|++++++.+. .++++.++
T Consensus 302 ---~~i~~~~~~g~~~~~~d~~~~~~~i~~l~-~~~~~~~~~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 302 ---SYVNLHGVTGLVVPPGDPAALAEAIRRLL-EDPELRERLGEAARERAEEEFTADRMV 357 (357)
T ss_pred ---hHHhhCCCceEEeCCCCHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHhcchHhhC
Confidence 23443 5567666 47999999999999 799999999999999874 46666653
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5e-20 Score=185.66 Aligned_cols=336 Identities=13% Similarity=0.078 Sum_probs=187.9
Q ss_pred CeEEEEecC-CCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhh
Q 012492 63 KNVLILMSD-TGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIH 141 (462)
Q Consensus 63 ~kIli~~~~-~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 141 (462)
||||.+..+ -+||....+..|++.|.++|++ +.++-.... .+.. ......|....+..+-+....+-. ..
T Consensus 1 mkil~i~~~l~~GGaeri~~~L~~~l~~~G~~---~~i~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~ 71 (405)
T PRK10125 1 MNILQFNVRLAEGGAAGVALDLHQRALQQGLA---SHFVYGYGK-GGKE-SVSHQNYPQVIKHTPRMTAMANIA----LF 71 (405)
T ss_pred CeEEEEEeeecCCchhHHHHHHHHHHHhcCCe---EEEEEecCC-Cccc-ccccCCcceEEEecccHHHHHHHH----HH
Confidence 799988633 2369999999999999999864 333311110 1110 000000100000000000000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHH-HhhCCCEEEECCcccc--hHHHHH-----HHHcCCCCCCeEEEEecCCCCC----Cc---
Q 012492 142 SCYLAAMAAYYAKEVEAGL-MEYKPDIIISVHPLMQ--HIPLWV-----LKWQGLQKKVIFVTVITDLNTC----HP--- 206 (462)
Q Consensus 142 ~~~~~~~~~~~~~~l~~~l-~~~kPDvVi~~~~~~~--~~~~~~-----~~~~~~~~~iP~v~~~~d~~~~----~~--- 206 (462)
+.+. .-......++.+++ ++++|||||.+..... .+.... .+.. ..++|+|+..||+... |.
T Consensus 72 ~~~~-~~~~~~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~--~~~~piV~TlHd~~~~tg~c~~~~~ 148 (405)
T PRK10125 72 RLFN-RDLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNH--KPDVTLVWTLHDHWSVTGRCAFTDG 148 (405)
T ss_pred Hhcc-hhhcchHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcc--cCCCCEEEecccccccCCCcCCCcc
Confidence 0000 00112223444445 6999999998874432 221111 1122 2479999999997631 10
Q ss_pred --ccc----------------------------------cCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhc
Q 012492 207 --TWF----------------------------------HPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVR 250 (462)
Q Consensus 207 --~~~----------------------------------~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~ 250 (462)
.|. .+..+.++++|+..++.+... +...++.+++|+++.....
T Consensus 149 C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~-~~~~~i~vI~NGid~~~~~ 227 (405)
T PRK10125 149 CEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSL-YGPGRCRIINNGIDMATEA 227 (405)
T ss_pred cccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHH-cCCCCEEEeCCCcCccccc
Confidence 010 012357889999998877643 3457899999999854221
Q ss_pred ccCChHHHHHHcCCCCCCcEEEEEeCCC--CCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCC
Q 012492 251 AVISKDNLRLELQMDPILPAVLLMGGGE--GMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIP 328 (462)
Q Consensus 251 ~~~~~~~~r~~l~l~~~~~~iLv~gG~~--~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~ 328 (462)
........+ .+++++.++++|+.. ..++...+++++ ..+. ++++++ +.|.+... ...+
T Consensus 228 ~~~~~~~~~----~~~~~~~il~v~~~~~~~~Kg~~~li~A~-~~l~------~~~~L~-ivG~g~~~--------~~~~ 287 (405)
T PRK10125 228 ILAELPPVR----ETQGKPKIAVVAHDLRYDGKTDQQLVREM-MALG------DKIELH-TFGKFSPF--------TAGN 287 (405)
T ss_pred ccccccccc----cCCCCCEEEEEEeccccCCccHHHHHHHH-HhCC------CCeEEE-EEcCCCcc--------cccc
Confidence 100111111 124556666666533 234456666555 3332 356654 45654321 1246
Q ss_pred eEEeccc---hhHHHHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHH
Q 012492 329 VKVRGFE---TQMEKWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKET 399 (462)
Q Consensus 329 V~~~g~~---~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~l 399 (462)
+.+.|+. .++.++|+.||++|.+|. |++++|||+||+|||+++.++- ..+++.+.|++++ |++++
T Consensus 288 v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~------~Eiv~~~~G~lv~~~d~~~L 361 (405)
T PRK10125 288 VVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAA------REVLQKSGGKTVSEEEVLQL 361 (405)
T ss_pred eEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCCh------HHhEeCCcEEEECCCCHHHH
Confidence 8888875 568899999999999884 9999999999999999997542 2345556777775 67777
Q ss_pred HHHHHHHhcCCHHHHHH-H---HHHHHhh-cCCcHHHHHHHHHHHHHhc
Q 012492 400 ARIVTEWFSTKTDELKR-M---SENALKL-AQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 400 a~~i~~ll~~d~~~~~~-m---~~~a~~~-~~~~~~~~ia~~i~~l~~~ 443 (462)
++.+ +++.+++ + .+++++. .+.++++.+++.++++.++
T Consensus 362 a~~~------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~ 404 (405)
T PRK10125 362 AQLS------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQN 404 (405)
T ss_pred Hhcc------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 7632 4444433 2 2335544 4679999999999998753
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-20 Score=191.87 Aligned_cols=256 Identities=18% Similarity=0.184 Sum_probs=180.8
Q ss_pred hCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCC-------Cc-------------------ccccCCCcEE
Q 012492 163 YKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTC-------HP-------------------TWFHPRVNRC 216 (462)
Q Consensus 163 ~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~-------~~-------------------~~~~~~~d~~ 216 (462)
.++|+||+++....+.....++.. .++|+|...|+.... .. .+.++.+|.+
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~---~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~I 248 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKAR---RGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRI 248 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHH---hCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 378999998754433322333322 489998877764210 00 0123568999
Q ss_pred EEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhc
Q 012492 217 YCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLD 296 (462)
Q Consensus 217 i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~ 296 (462)
++.|+..++...+.|++++++.+++|+++.+.+.+. ... ..+++.++++.+|+....+++..++.++ +.+.+
T Consensus 249 i~~s~~~~~~~~~~g~~~~ki~vIpNgid~~~f~~~-~~~------~~~~~~~~i~~vGrl~~~Kg~~~li~a~-~~l~~ 320 (475)
T cd03813 249 TTLYEGNRERQIEDGADPEKIRVIPNGIDPERFAPA-RRA------RPEKEPPVVGLIGRVVPIKDIKTFIRAA-AIVRK 320 (475)
T ss_pred EecCHHHHHHHHHcCCCHHHeEEeCCCcCHHHcCCc-ccc------ccCCCCcEEEEEeccccccCHHHHHHHH-HHHHH
Confidence 999999988877889988999999999987655431 110 1234455555555544456666666655 44544
Q ss_pred ccCCCCCceEEEEccCC---H----HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecC----ChhhHHHHHHhCC
Q 012492 297 KETGRPIGQLIIICGRN---R----TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKA----GPGTIAEALIRGL 365 (462)
Q Consensus 297 ~~~~~~~~~~lvv~G~~---~----~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~s----g~~t~~EAla~G~ 365 (462)
..|+++++++ |.+ . ++.+.++++++.++|+|.| .+++.++|+.||++|.+| .|++++|||++|+
T Consensus 321 ---~~p~~~l~Iv-G~g~~~~~~~~e~~~li~~l~l~~~V~f~G-~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~ 395 (475)
T cd03813 321 ---KIPDAEGWVI-GPTDEDPEYAEECRELVESLGLEDNVKFTG-FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI 395 (475)
T ss_pred ---hCCCeEEEEE-CCCCcChHHHHHHHHHHHHhCCCCeEEEcC-CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC
Confidence 2477876654 443 1 2345566678889999999 678999999999999887 3899999999999
Q ss_pred CEEEecCCCCccccchHHHHHC------C-ceeee--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC-cHHHHHHH
Q 012492 366 PIILNDYIPGQEKGNVPYVVDN------G-AGVFT--RSPKETARIVTEWFSTKTDELKRMSENALKLAQP-EAVVDIVK 435 (462)
Q Consensus 366 PvI~~~~~~~~~~~n~~~l~~~------G-~g~~~--~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~-~~~~~ia~ 435 (462)
|+|+++.++. ..+++. | .|+++ .|+++++++|.+++ +|++.+++|++++++.+.. ++++.+++
T Consensus 396 PVVatd~g~~------~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll-~~~~~~~~~~~~a~~~v~~~~s~~~~~~ 468 (475)
T cd03813 396 PVVATDVGSC------RELIEGADDEALGPAGEVVPPADPEALARAILRLL-KDPELRRAMGEAGRKRVERYYTLERMID 468 (475)
T ss_pred CEEECCCCCh------HHHhcCCcccccCCceEEECCCCHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 9999886432 223333 2 56665 47999999999999 7999999999999987765 68899999
Q ss_pred HHHHHH
Q 012492 436 DIHDLA 441 (462)
Q Consensus 436 ~i~~l~ 441 (462)
.+.++.
T Consensus 469 ~y~~lY 474 (475)
T cd03813 469 SYRRLY 474 (475)
T ss_pred HHHHHh
Confidence 988865
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.1e-19 Score=174.64 Aligned_cols=311 Identities=12% Similarity=-0.010 Sum_probs=193.0
Q ss_pred CeEEEEecC-------CCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcC
Q 012492 63 KNVLILMSD-------TGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHST 135 (462)
Q Consensus 63 ~kIli~~~~-------~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~ 135 (462)
|||++++.. .+||..+....|+++|.++|| +|.+...... ....... . + ....+. .
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~---~V~v~~~~~~--~~~~~~~-~-~---------~~~~~~-~ 63 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGH---EVTLFASGDS--KTAAPLV-P-V---------VPEPLR-L 63 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCc---eEEEEecCCC--Cccccee-e-c---------cCCCcc-c
Confidence 799998743 456999999999999999875 4444422111 0000000 0 0 000000 0
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcc---cccCC
Q 012492 136 SPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPT---WFHPR 212 (462)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~---~~~~~ 212 (462)
. . . ............+.+.+++.+||+|+++....... +++. .++|+|...|+....... +....
T Consensus 64 ~--~-~--~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~---~~~~----~~~~~v~~~h~~~~~~~~~~~~~~~~ 131 (335)
T cd03802 64 D--A-P--GRDRAEAEALALAERALAAGDFDIVHNHSLHLPLP---FARP----LPVPVVTTLHGPPDPELLKLYYAARP 131 (335)
T ss_pred c--c-c--hhhHhhHHHHHHHHHHHhcCCCCEEEecCcccchh---hhcc----cCCCEEEEecCCCCcccchHHHhhCc
Confidence 0 0 0 00011233445667889999999999988665432 2332 478998887765421111 12244
Q ss_pred CcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHH
Q 012492 213 VNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGE 292 (462)
Q Consensus 213 ~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~ 292 (462)
.+.++++|+...+.+... .++.+++|+++.+.+.+. +.+++.++++|.....++...++.. ++
T Consensus 132 ~~~~~~~s~~~~~~~~~~----~~~~vi~ngvd~~~~~~~------------~~~~~~i~~~Gr~~~~Kg~~~li~~-~~ 194 (335)
T cd03802 132 DVPFVSISDAQRRPWPPL----PWVATVHNGIDLDDYPFR------------GPKGDYLLFLGRISPEKGPHLAIRA-AR 194 (335)
T ss_pred CCeEEEecHHHHhhcccc----cccEEecCCcChhhCCCC------------CCCCCEEEEEEeeccccCHHHHHHH-HH
Confidence 577888898877655432 678999999987655420 1234556666655444555554443 22
Q ss_pred hhhcccCCCCCceEEEEccCCH--H-HHHHHhhcc-CCCCeEEeccc--hhHHHHHHhcchheecCC-----hhhHHHHH
Q 012492 293 SLLDKETGRPIGQLIIICGRNR--T-LASTLQSEE-WKIPVKVRGFE--TQMEKWMGACDCIITKAG-----PGTIAEAL 361 (462)
Q Consensus 293 ~l~~~~~~~~~~~~lvv~G~~~--~-l~~~~~~~~-~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg-----~~t~~EAl 361 (462)
. .++++++ +|.+. . ......+.. ..++|.|.|++ +++..+|+.+|+++.++. |.+++|||
T Consensus 195 ~--------~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAm 265 (335)
T cd03802 195 R--------AGIPLKL-AGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAM 265 (335)
T ss_pred h--------cCCeEEE-EeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHH
Confidence 2 3566554 45442 1 222333322 46799999998 467899999999997652 78999999
Q ss_pred HhCCCEEEecCCCCccccchHHHHHCC-ceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhh-cCCcHHHHHHHHHHH
Q 012492 362 IRGLPIILNDYIPGQEKGNVPYVVDNG-AGVFTRSPKETARIVTEWFSTKTDELKRMSENALKL-AQPEAVVDIVKDIHD 439 (462)
Q Consensus 362 a~G~PvI~~~~~~~~~~~n~~~l~~~G-~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~-~~~~~~~~ia~~i~~ 439 (462)
++|+|+|+++.++.. .+.+.| .|+++++++++++++..++ ..+. +++++. .+.++++.+++.+.+
T Consensus 266 a~G~PvI~~~~~~~~------e~i~~~~~g~l~~~~~~l~~~l~~l~-~~~~------~~~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 266 ACGTPVIAFRRGAVP------EVVEDGVTGFLVDSVEELAAAVARAD-RLDR------AACRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred hcCCCEEEeCCCCch------hheeCCCcEEEeCCHHHHHHHHHHHh-ccHH------HHHHHHHHHhCCHHHHHHHHHH
Confidence 999999999975332 244455 7888888999999999987 3331 223332 367899999999998
Q ss_pred HH
Q 012492 440 LA 441 (462)
Q Consensus 440 l~ 441 (462)
+.
T Consensus 333 ~y 334 (335)
T cd03802 333 LY 334 (335)
T ss_pred Hh
Confidence 75
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.2e-20 Score=194.05 Aligned_cols=277 Identities=13% Similarity=0.145 Sum_probs=177.6
Q ss_pred HHHHHHHHH-Hhh--CCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCC---C------------c-------
Q 012492 152 YAKEVEAGL-MEY--KPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTC---H------------P------- 206 (462)
Q Consensus 152 ~~~~l~~~l-~~~--kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~---~------------~------- 206 (462)
+...+.+.+ ++. +||+||+++...+..+..+++. .+||.+.+.|..... + .
T Consensus 393 f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~----lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~a 468 (815)
T PLN00142 393 FAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHK----LGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTA 468 (815)
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHH----hCCCEEEEcccchhhhccccCCcccccchhhhhhhchHH
Confidence 333444444 333 5999999976655544444443 589999887743210 0 0
Q ss_pred -ccccCCCcEEEEcCHHHHH-------HHHH-------------cCCC--CCcEEEcCCCCChhhhcccCCh--------
Q 012492 207 -TWFHPRVNRCYCPSKEVAK-------RASY-------------FGLE--VSQIRVFGLPIRPSFVRAVISK-------- 255 (462)
Q Consensus 207 -~~~~~~~d~~i~~s~~~~~-------~l~~-------------~gi~--~~~i~v~g~pv~~~~~~~~~~~-------- 255 (462)
.+....+|.+++.+..... .+.. .|++ ..++.+++++++...+.+....
T Consensus 469 E~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~ 548 (815)
T PLN00142 469 DLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLH 548 (815)
T ss_pred HHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhc
Confidence 0112346777777765542 1111 1332 4588899999987644421111
Q ss_pred ----------HHHHHHcCC--CCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccC-CH--------
Q 012492 256 ----------DNLRLELQM--DPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGR-NR-------- 314 (462)
Q Consensus 256 ----------~~~r~~l~l--~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~-~~-------- 314 (462)
+..++.+++ ++++++|+.+|+....|++..+++++. .+.+. .+++++++++|. ..
T Consensus 549 n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a-~l~~l---~~~~~LVIVGgg~d~~~s~d~ee 624 (815)
T PLN00142 549 PSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYG-KNKRL---RELVNLVVVGGFIDPSKSKDREE 624 (815)
T ss_pred ccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHH-HHHHh---CCCcEEEEEECCccccccccHHH
Confidence 112345665 455677766666656677766666654 34321 346777766554 10
Q ss_pred -----HHHHHHhhccCCCCeEEeccc------hhHHHHHH-hcchheecCC----hhhHHHHHHhCCCEEEecCCCCccc
Q 012492 315 -----TLASTLQSEEWKIPVKVRGFE------TQMEKWMG-ACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEK 378 (462)
Q Consensus 315 -----~l~~~~~~~~~~~~V~~~g~~------~~~~~l~~-~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~ 378 (462)
++.+.++++++.++|.|.|.. +++..+++ ++|+||.+|. |.+++|||+||+|+|+++.++.
T Consensus 625 ~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~--- 701 (815)
T PLN00142 625 IAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGP--- 701 (815)
T ss_pred HHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCH---
Confidence 133445667888999999864 34556666 4799999873 9999999999999999986432
Q ss_pred cchHHHHHCC-ceeeeC--CHHHHHHHHHHHhc---CCHHHHHHHHHHHHhhc-CCcHHHHHHHHHHHHHh
Q 012492 379 GNVPYVVDNG-AGVFTR--SPKETARIVTEWFS---TKTDELKRMSENALKLA-QPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 379 ~n~~~l~~~G-~g~~~~--~~~~la~~i~~ll~---~d~~~~~~m~~~a~~~~-~~~~~~~ia~~i~~l~~ 442 (462)
..++.+| .|++++ ++++++++|.+++. +|++.+++|++++++.+ +.++|+.+++.++++..
T Consensus 702 ---~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~~ 769 (815)
T PLN00142 702 ---AEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLGG 769 (815)
T ss_pred ---HHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 2244444 688775 68899988875431 69999999999998876 67999999999999873
|
|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.7e-19 Score=176.80 Aligned_cols=254 Identities=13% Similarity=0.135 Sum_probs=169.7
Q ss_pred HhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCc--------------ccccCCCcEEEEcCHHHHHH
Q 012492 161 MEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHP--------------TWFHPRVNRCYCPSKEVAKR 226 (462)
Q Consensus 161 ~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~--------------~~~~~~~d~~i~~s~~~~~~ 226 (462)
++.++|+|++.++.. ......++. .+.|++...|+...... .+..+.+|.+++.|+..++.
T Consensus 83 ~~~~~~~i~~~~~~~-~~~~~~~~~----~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 157 (363)
T cd04955 83 VKRDIDHVHALGPAI-APFLPLLRL----KGKKVVVNMDGLEWKRAKWGRPAKRYLKFGEKLAVKFADRLIADSPGIKEY 157 (363)
T ss_pred ccCCeEEEEecCccH-HHHHHHHHh----cCCCEEEEccCcceeecccccchhHHHHHHHHHHHhhccEEEeCCHHHHHH
Confidence 456677777666554 221222332 37888877776431110 11235679999999999988
Q ss_pred HHH-cCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCce
Q 012492 227 ASY-FGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQ 305 (462)
Q Consensus 227 l~~-~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~ 305 (462)
+.+ .+.+ . .+++|+++...... +...+.+++++++ +.++++|+....++...+++++ +.+. .+++
T Consensus 158 ~~~~~~~~--~-~~i~ngv~~~~~~~---~~~~~~~~~~~~~-~~i~~~G~~~~~Kg~~~li~a~-~~l~------~~~~ 223 (363)
T cd04955 158 LKEKYGRD--S-TYIPYGADHVVSSE---EDEILKKYGLEPG-RYYLLVGRIVPENNIDDLIEAF-SKSN------SGKK 223 (363)
T ss_pred HHHhcCCC--C-eeeCCCcChhhcch---hhhhHHhcCCCCC-cEEEEEecccccCCHHHHHHHH-Hhhc------cCce
Confidence 854 4543 2 78999987654321 2334556666544 4566666555556666666555 3442 2466
Q ss_pred EEEEccCC---HHHHHHHh-hccCCCCeEEeccc--hhHHHHHHhcchheecCC-----hhhHHHHHHhCCCEEEecCCC
Q 012492 306 LIIICGRN---RTLASTLQ-SEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG-----PGTIAEALIRGLPIILNDYIP 374 (462)
Q Consensus 306 ~lvv~G~~---~~l~~~~~-~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg-----~~t~~EAla~G~PvI~~~~~~ 374 (462)
++++ |.+ ..+.+.+. .++..++|++.|++ +++.++|+.||+++.+|. |++++|||++|+|+|+++.++
T Consensus 224 l~iv-G~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~ 302 (363)
T cd04955 224 LVIV-GNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF 302 (363)
T ss_pred EEEE-cCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCc
Confidence 6554 443 23444554 45677899999998 578899999999987663 789999999999999998764
Q ss_pred CccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcC-CcHHHHHHHHHHHHHh
Q 012492 375 GQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQ-PEAVVDIVKDIHDLAA 442 (462)
Q Consensus 375 ~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~-~~~~~~ia~~i~~l~~ 442 (462)
..+. +. . .|..+...+.+++++.+++ +|++.+.+|++++++... .++|+.+++.+.++++
T Consensus 303 ~~e~-----~~-~-~g~~~~~~~~l~~~i~~l~-~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 303 NREV-----LG-D-KAIYFKVGDDLASLLEELE-ADPEEVSAMAKAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred ccee-----ec-C-CeeEecCchHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 3322 22 2 3444444334999999999 799999999999998875 5899999999998753
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-19 Score=185.74 Aligned_cols=258 Identities=13% Similarity=0.108 Sum_probs=177.0
Q ss_pred HHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCC--C----CCcc-c---------ccCCCcEEEEcCH
Q 012492 158 AGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLN--T----CHPT-W---------FHPRVNRCYCPSK 221 (462)
Q Consensus 158 ~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~--~----~~~~-~---------~~~~~d~~i~~s~ 221 (462)
+.|...++||+|++.+.....++. +.. .++|.+.++|.-. . .+.. | ....+|.++++|+
T Consensus 205 ~~L~~~~~di~i~dr~~~~~~~~~--~~~---~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~ 279 (500)
T TIGR02918 205 KQLNLTKKDIIILDRSTGIGQAVL--ENK---GPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATD 279 (500)
T ss_pred HHHhCCCCCEEEEcCCcccchHHH--hcC---CCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCH
Confidence 444567899999999776554322 221 4788877776311 0 0111 1 1234799999999
Q ss_pred HHHHHHHH----cCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcc
Q 012492 222 EVAKRASY----FGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDK 297 (462)
Q Consensus 222 ~~~~~l~~----~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~ 297 (462)
..++.+.+ .+.+..++.++++++.+.+..+ .. ..+...++.+|+....|++..+++++. .+.+
T Consensus 280 ~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~----~~-------~r~~~~il~vGrl~~~Kg~~~li~A~~-~l~~- 346 (500)
T TIGR02918 280 IQNQILKNQFKKYYNIEPRIYTIPVGSLDELQYP----EQ-------ERKPFSIITASRLAKEKHIDWLVKAVV-KAKK- 346 (500)
T ss_pred HHHHHHHHHhhhhcCCCCcEEEEcCCCcccccCc----cc-------ccCCeEEEEEeccccccCHHHHHHHHH-HHHh-
Confidence 88777654 2334578999999875443321 00 112233444444444466666666654 4443
Q ss_pred cCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCC----hhhHHHHHHhCCCEEEe
Q 012492 298 ETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAG----PGTIAEALIRGLPIILN 370 (462)
Q Consensus 298 ~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~ 370 (462)
..|++++.+ .|.+. .+++.++++++.++|.|.|+. ++.++|+.||++|++|. |++++|||+||+|+|++
T Consensus 347 --~~p~~~l~i-~G~G~~~~~l~~~i~~~~l~~~V~f~G~~-~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~ 422 (500)
T TIGR02918 347 --SVPELTFDI-YGEGGEKQKLQKIINENQAQDYIHLKGHR-NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGF 422 (500)
T ss_pred --hCCCeEEEE-EECchhHHHHHHHHHHcCCCCeEEEcCCC-CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEe
Confidence 257887654 45554 355666777788899999986 78999999999999883 89999999999999999
Q ss_pred cCCCCccccchHHHHHCCceeeeCC----------HHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH
Q 012492 371 DYIPGQEKGNVPYVVDNGAGVFTRS----------PKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDL 440 (462)
Q Consensus 371 ~~~~~~~~~n~~~l~~~G~g~~~~~----------~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l 440 (462)
+...+ +.+.+.+...|++++. +++++++|.+++ + ++.+++|++++++.++.++++.+++.|+++
T Consensus 423 dv~~G----~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll-~-~~~~~~~~~~a~~~a~~fs~~~v~~~w~~l 496 (500)
T TIGR02918 423 DVNYG----NPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYF-N-SNDIDAFHEYSYQIAEGFLTANIIEKWKKL 496 (500)
T ss_pred cCCCC----CHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHh-C-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 97533 2223444446887751 778999999999 4 456899999999999999999999999998
Q ss_pred Hhc
Q 012492 441 AAQ 443 (462)
Q Consensus 441 ~~~ 443 (462)
+++
T Consensus 497 l~~ 499 (500)
T TIGR02918 497 VRE 499 (500)
T ss_pred Hhh
Confidence 864
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.6e-20 Score=184.01 Aligned_cols=267 Identities=10% Similarity=0.070 Sum_probs=169.8
Q ss_pred HHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEec-CCCCC---C-----c--------cccc-CCC
Q 012492 152 YAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVIT-DLNTC---H-----P--------TWFH-PRV 213 (462)
Q Consensus 152 ~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~-d~~~~---~-----~--------~~~~-~~~ 213 (462)
...++.+.+++++||+|+...|+..+..-...++.. ..++ +|.++| ++... + . .|.. ..+
T Consensus 104 ~~~~i~~~l~~~~pDVIHv~tP~~LG~~~~g~~~~~-k~~~-vV~tyHT~y~~Y~~~~~~g~~~~~l~~~~~~~~~r~~~ 181 (462)
T PLN02846 104 PVGDISETIPDEEADIAVLEEPEHLTWYHHGKRWKT-KFRL-VIGIVHTNYLEYVKREKNGRVKAFLLKYINSWVVDIYC 181 (462)
T ss_pred ChHHHHHHHHhcCCCEEEEcCchhhhhHHHHHHHHh-cCCc-EEEEECCChHHHHHHhccchHHHHHHHHHHHHHHHHhc
Confidence 346788999999999999999987654101122221 1344 665444 44211 0 0 1111 237
Q ss_pred cEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCC--CcEEEEEeCCCCCccHHHHHHHHH
Q 012492 214 NRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPI--LPAVLLMGGGEGMGPVKETAMALG 291 (462)
Q Consensus 214 d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~--~~~iLv~gG~~~~~~~~~~l~~l~ 291 (462)
|.++++|....+ +.+. +....++|+..++.+. .+. .++.++ +++ .+.++++|+....|++..+++++
T Consensus 182 d~vi~pS~~~~~-l~~~------~i~~v~GVd~~~f~~~-~~~-~~~~~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~- 250 (462)
T PLN02846 182 HKVIRLSAATQD-YPRS------IICNVHGVNPKFLEIG-KLK-LEQQKN-GEQAFTKGAYYIGKMVWSKGYKELLKLL- 250 (462)
T ss_pred CEEEccCHHHHH-HhhC------EEecCceechhhcCCC-ccc-HhhhcC-CCCCcceEEEEEecCcccCCHHHHHHHH-
Confidence 899999986654 4432 3333478888877642 222 333333 333 23355555555566676666665
Q ss_pred HhhhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCC----hhhHHHHHHhC
Q 012492 292 ESLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAG----PGTIAEALIRG 364 (462)
Q Consensus 292 ~~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg----~~t~~EAla~G 364 (462)
+.+.+ ..++++++ ++|+++ ++++..+++++..++ |.|+. +..++|+.+|+||.+|. |++++||||+|
T Consensus 251 ~~l~~---~~~~~~l~-ivGdGp~~~~L~~~a~~l~l~~~v-f~G~~-~~~~~~~~~DvFv~pS~~Et~g~v~lEAmA~G 324 (462)
T PLN02846 251 HKHQK---ELSGLEVD-LYGSGEDSDEVKAAAEKLELDVRV-YPGRD-HADPLFHDYKVFLNPSTTDVVCTTTAEALAMG 324 (462)
T ss_pred HHHHh---hCCCeEEE-EECCCccHHHHHHHHHhcCCcEEE-ECCCC-CHHHHHHhCCEEEECCCcccchHHHHHHHHcC
Confidence 44443 13677654 456665 355556666654333 67764 55689999999999884 99999999999
Q ss_pred CCEEEecCCCCccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhcc
Q 012492 365 LPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQR 444 (462)
Q Consensus 365 ~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~~ 444 (462)
+|||+.+.+.+ +.+.+.+.|+.+.+++++++++.++|.+++ +.++.+++ ..++|+.+++.++++++-+
T Consensus 325 ~PVVa~~~~~~------~~v~~~~ng~~~~~~~~~a~ai~~~l~~~~---~~~~~~a~---~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 325 KIVVCANHPSN------EFFKQFPNCRTYDDGKGFVRATLKALAEEP---APLTDAQR---HELSWEAATERFLRVADLD 392 (462)
T ss_pred CcEEEecCCCc------ceeecCCceEecCCHHHHHHHHHHHHccCc---hhHHHHHH---HhCCHHHHHHHHHHHhccC
Confidence 99999997532 235556678888899999999999994333 22333333 3899999999999999866
Q ss_pred CCCcc
Q 012492 445 GPLAR 449 (462)
Q Consensus 445 ~~~~~ 449 (462)
.++.+
T Consensus 393 ~~~~~ 397 (462)
T PLN02846 393 LPSSA 397 (462)
T ss_pred CcCcc
Confidence 65444
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.4e-20 Score=176.08 Aligned_cols=269 Identities=20% Similarity=0.109 Sum_probs=159.3
Q ss_pred eEEEEe---cCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchh
Q 012492 64 NVLILM---SDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWI 140 (462)
Q Consensus 64 kIli~~---~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 140 (462)
||+|.+ ..+|.||.+++++||++|+++|+. .+|++.- .+....+. ++. ..+. +..... ..
T Consensus 1 ~i~ir~Da~~~iG~GHv~Rcl~LA~~l~~~g~~--v~f~~~~------~~~~~~~~-----i~~-~g~~--v~~~~~-~~ 63 (279)
T TIGR03590 1 KILFRADASSEIGLGHVMRCLTLARALHAQGAE--VAFACKP------LPGDLIDL-----LLS-AGFP--VYELPD-ES 63 (279)
T ss_pred CEEEEecCCccccccHHHHHHHHHHHHHHCCCE--EEEEeCC------CCHHHHHH-----HHH-cCCe--EEEecC-CC
Confidence 678886 348999999999999999888752 3344421 11111110 100 0010 000000 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccccCCCcEEEEcC
Q 012492 141 HSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPS 220 (462)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~~~~d~~i~~s 220 (462)
. ...-...+.+.+++.+||+||+++...........+. ..+.+.++.|+.. ++. .+|.++..+
T Consensus 64 ~-------~~~d~~~~~~~l~~~~~d~vV~D~y~~~~~~~~~~k~-----~~~~l~~iDD~~~-~~~----~~D~vin~~ 126 (279)
T TIGR03590 64 S-------RYDDALELINLLEEEKFDILIVDHYGLDADWEKLIKE-----FGRKILVIDDLAD-RPH----DCDLLLDQN 126 (279)
T ss_pred c-------hhhhHHHHHHHHHhcCCCEEEEcCCCCCHHHHHHHHH-----hCCeEEEEecCCC-CCc----CCCEEEeCC
Confidence 0 0112334667899999999999997544321222332 3445557788752 221 578888766
Q ss_pred HHHHHHHHHcC-CCCCcEEEcCC---CCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCcc-HHHHHHHHHHhhh
Q 012492 221 KEVAKRASYFG-LEVSQIRVFGL---PIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGP-VKETAMALGESLL 295 (462)
Q Consensus 221 ~~~~~~l~~~g-i~~~~i~v~g~---pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~-~~~~l~~l~~~l~ 295 (462)
.. .+...-.+ +|+.+..+.|. |++++|.... +....+ ++.+.||+++|+.+..+ ..+++..+. .+
T Consensus 127 ~~-~~~~~y~~~~~~~~~~l~G~~Y~~lr~eF~~~~--~~~~~~-----~~~~~iLi~~GG~d~~~~~~~~l~~l~-~~- 196 (279)
T TIGR03590 127 LG-ADASDYQGLVPANCRLLLGPSYALLREEFYQLA--TANKRR-----KPLRRVLVSFGGADPDNLTLKLLSALA-ES- 196 (279)
T ss_pred CC-cCHhHhcccCcCCCeEEecchHHhhhHHHHHhh--Hhhhcc-----cccCeEEEEeCCcCCcCHHHHHHHHHh-cc-
Confidence 54 22322223 56567788898 9999887531 111111 12345666655545443 344454443 22
Q ss_pred cccCCCCCceEEEEccCCHHHHHHHhhc-cCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCC
Q 012492 296 DKETGRPIGQLIIICGRNRTLASTLQSE-EWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIP 374 (462)
Q Consensus 296 ~~~~~~~~~~~lvv~G~~~~l~~~~~~~-~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~ 374 (462)
.+++++.+++|.+....+.+++. ....++++.++.++|.++|+.||++|+++| +|+.|++++|+|+|+.+...
T Consensus 197 -----~~~~~i~vv~G~~~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl~Is~~G-~T~~E~~a~g~P~i~i~~~~ 270 (279)
T TIGR03590 197 -----QINISITLVTGSSNPNLDELKKFAKEYPNIILFIDVENMAELMNEADLAIGAAG-STSWERCCLGLPSLAICLAE 270 (279)
T ss_pred -----ccCceEEEEECCCCcCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCEEEECCc-hHHHHHHHcCCCEEEEEecc
Confidence 13467778888864322223221 223589999999999999999999999766 89999999999999999876
Q ss_pred CccccchHH
Q 012492 375 GQEKGNVPY 383 (462)
Q Consensus 375 ~~~~~n~~~ 383 (462)
+|+ .|++.
T Consensus 271 nQ~-~~a~~ 278 (279)
T TIGR03590 271 NQQ-SNSQQ 278 (279)
T ss_pred cHH-HHhhh
Confidence 654 46543
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.6e-19 Score=184.21 Aligned_cols=276 Identities=18% Similarity=0.160 Sum_probs=178.8
Q ss_pred HHHHHHHHHh--hCCCEEEECCcccchHHHHHHHHcC--CCCCCeEEEEecCCCCCC--c---------cc---------
Q 012492 153 AKEVEAGLME--YKPDIIISVHPLMQHIPLWVLKWQG--LQKKVIFVTVITDLNTCH--P---------TW--------- 208 (462)
Q Consensus 153 ~~~l~~~l~~--~kPDvVi~~~~~~~~~~~~~~~~~~--~~~~iP~v~~~~d~~~~~--~---------~~--------- 208 (462)
.+.+.+++++ ++|||||++......++..+.+... ...++|+|..+|+..... + .|
T Consensus 116 ~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 195 (476)
T cd03791 116 SRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGL 195 (476)
T ss_pred HHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhccc
Confidence 3344455655 8999999987654444333332210 013789999888753100 0 00
Q ss_pred -----------ccCCCcEEEEcCHHHHHHHHHc----------CCCCCcEEEcCCCCChhhhcccCC-------------
Q 012492 209 -----------FHPRVNRCYCPSKEVAKRASYF----------GLEVSQIRVFGLPIRPSFVRAVIS------------- 254 (462)
Q Consensus 209 -----------~~~~~d~~i~~s~~~~~~l~~~----------gi~~~~i~v~g~pv~~~~~~~~~~------------- 254 (462)
....+|.++++|+..++.+.+. ..+..++.+++|+++...+.+..+
T Consensus 196 ~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~ 275 (476)
T cd03791 196 EFYGQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLE 275 (476)
T ss_pred ccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccc
Confidence 1234688999999888777531 123478999999998765553211
Q ss_pred -----hHHHHHHcCCC--CCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCC-HHHHHHHhhc--c
Q 012492 255 -----KDNLRLELQMD--PILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRN-RTLASTLQSE--E 324 (462)
Q Consensus 255 -----~~~~r~~l~l~--~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~-~~l~~~~~~~--~ 324 (462)
+..++++++++ ++.++++++|+....++...+++++ +.+.+ .+++++++ |.+ ..+.+.++++ .
T Consensus 276 ~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~-~~l~~-----~~~~lvi~-G~g~~~~~~~~~~~~~~ 348 (476)
T cd03791 276 GKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEAL-PELLE-----LGGQLVIL-GSGDPEYEEALRELAAR 348 (476)
T ss_pred cHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHH-HHHHH-----cCcEEEEE-ecCCHHHHHHHHHHHHh
Confidence 34577888885 6677666666544455555555444 55543 13666554 444 3333444332 1
Q ss_pred CCCCeEE-eccc-hhHHHHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHH------CCceee
Q 012492 325 WKIPVKV-RGFE-TQMEKWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVD------NGAGVF 392 (462)
Q Consensus 325 ~~~~V~~-~g~~-~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~------~G~g~~ 392 (462)
...++.+ .++. +.+..+|+.||+++.+|. |.+.+|||++|+|+|+++.++..+. +.+ .|.|++
T Consensus 349 ~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~-----v~~~~~~~~~~~G~~ 423 (476)
T cd03791 349 YPGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADT-----VIDYNEDTGEGTGFV 423 (476)
T ss_pred CCCcEEEEEeCCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccce-----EeCCcCCCCCCCeEE
Confidence 2467775 4555 345689999999998873 7899999999999999987543221 222 236777
Q ss_pred eC--CHHHHHHHHHHHhc--CCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHh
Q 012492 393 TR--SPKETARIVTEWFS--TKTDELKRMSENALKLAQPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 393 ~~--~~~~la~~i~~ll~--~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~ 442 (462)
++ +++++++++.+++. .+++.+++|++++.+ ..++|+++++.++++.+
T Consensus 424 ~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 424 FEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLELYR 475 (476)
T ss_pred eCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHh
Confidence 64 68999999998763 367888888887754 46999999999998875
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.6e-19 Score=180.12 Aligned_cols=161 Identities=18% Similarity=0.178 Sum_probs=124.8
Q ss_pred CCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHHHh
Q 012492 265 DPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGA 344 (462)
Q Consensus 265 ~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~ 344 (462)
+++++.|+++.|+.+.....+++..+++.+.. .+.++++.+|...... ....+||.+.+|++ +..+|..
T Consensus 236 ~~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~-----~~~~~i~~~g~~~~~~-----~~~~~~v~~~~~~p-~~~ll~~ 304 (401)
T cd03784 236 AAGRPPVYVGFGSMVVRDPEALARLDVEAVAT-----LGQRAILSLGWGGLGA-----EDLPDNVRVVDFVP-HDWLLPR 304 (401)
T ss_pred hCCCCcEEEeCCCCcccCHHHHHHHHHHHHHH-----cCCeEEEEccCccccc-----cCCCCceEEeCCCC-HHHHhhh
Confidence 34678899999998765445555555555543 2457788888764211 23467999999985 7899999
Q ss_pred cchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHHHHHHHHH
Q 012492 345 CDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDELKRMSEN 420 (462)
Q Consensus 345 aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~~~~m~~~ 420 (462)
||++|+++|.+|++||+++|+|+|+.|...+ |..|++.+.+.|+|..+. +++.+.+++.+++ + ++.++++.+.
T Consensus 305 ~d~~I~hgG~~t~~eal~~GvP~v~~P~~~d-Q~~~a~~~~~~G~g~~l~~~~~~~~~l~~al~~~l-~-~~~~~~~~~~ 381 (401)
T cd03784 305 CAAVVHHGGAGTTAAALRAGVPQLVVPFFGD-QPFWAARVAELGAGPALDPRELTAERLAAALRRLL-D-PPSRRRAAAL 381 (401)
T ss_pred hheeeecCCchhHHHHHHcCCCEEeeCCCCC-cHHHHHHHHHCCCCCCCCcccCCHHHHHHHHHHHh-C-HHHHHHHHHH
Confidence 9999999999999999999999999998665 567999999999998764 5788999999999 4 4566777777
Q ss_pred HHhhcCCcHHHHHHHHHHH
Q 012492 421 ALKLAQPEAVVDIVKDIHD 439 (462)
Q Consensus 421 a~~~~~~~~~~~ia~~i~~ 439 (462)
++++....+..++++.|++
T Consensus 382 ~~~~~~~~g~~~~~~~ie~ 400 (401)
T cd03784 382 LRRIREEDGVPSAADVIER 400 (401)
T ss_pred HHHHHhccCHHHHHHHHhh
Confidence 7777677788888888875
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.4e-19 Score=178.30 Aligned_cols=252 Identities=15% Similarity=0.145 Sum_probs=175.0
Q ss_pred hhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCc------c---------cccCCCcEEEEcCHHHHHH
Q 012492 162 EYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHP------T---------WFHPRVNRCYCPSKEVAKR 226 (462)
Q Consensus 162 ~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~------~---------~~~~~~d~~i~~s~~~~~~ 226 (462)
..+||++|++.+.....+ ..... ...+.+.++|+...... . .....+|.+++.|+..++.
T Consensus 97 ~~~~diii~~~~~~~~~~--~~~~~---~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 171 (372)
T cd04949 97 DTKPDVFILDRPTLDGQA--LLNMK---KAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQD 171 (372)
T ss_pred CCCCCEEEECCccccchh--HHhcc---CCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHH
Confidence 589999999987755431 22221 24455555553211000 0 1134678999999999888
Q ss_pred HHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceE
Q 012492 227 ASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQL 306 (462)
Q Consensus 227 l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~ 306 (462)
+.+..-...++.+++++++.....+. .. .+.+...++.+|+....++...++.++. .+.+ ..|++++
T Consensus 172 l~~~~~~~~~v~~ip~g~~~~~~~~~-~~--------~~~~~~~i~~vgrl~~~K~~~~li~a~~-~l~~---~~~~~~l 238 (372)
T cd04949 172 LQKQFGNYNPIYTIPVGSIDPLKLPA-QF--------KQRKPHKIITVARLAPEKQLDQLIKAFA-KVVK---QVPDATL 238 (372)
T ss_pred HHHHhCCCCceEEEcccccChhhccc-ch--------hhcCCCeEEEEEccCcccCHHHHHHHHH-HHHH---hCCCcEE
Confidence 87653333458899999876654321 00 1123345666665545566666666554 4443 2577876
Q ss_pred EEEccCCH---HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCcccc
Q 012492 307 IIICGRNR---TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKG 379 (462)
Q Consensus 307 lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~ 379 (462)
+++ |.+. .+.+..+++++..+|.+.|+.+++.++|+.||++|.+|. |.+++|||++|+|+|+++...+
T Consensus 239 ~i~-G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g---- 313 (372)
T cd04949 239 DIY-GYGDEEEKLKELIEELGLEDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYG---- 313 (372)
T ss_pred EEE-EeCchHHHHHHHHHHcCCcceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCC----
Confidence 554 4443 244555666788899999999999999999999998873 8999999999999999986533
Q ss_pred chHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHH
Q 012492 380 NVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDI 437 (462)
Q Consensus 380 n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i 437 (462)
..+.+.+...|++++ ++++++++|.+++ +|++.+++|++++++.++.++++++++.|
T Consensus 314 ~~~~v~~~~~G~lv~~~d~~~la~~i~~ll-~~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 314 PSEIIEDGENGYLVPKGDIEALAEAIIELL-NDPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred cHHHcccCCCceEeCCCcHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 223444445788877 8999999999999 79999999999999999999999998764
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.7e-19 Score=180.16 Aligned_cols=279 Identities=16% Similarity=0.074 Sum_probs=180.3
Q ss_pred HHHHHHHh--hCCCEEEECCcccchHHHHHHHHc---CCCCCCeEEEEecCCCCC--Cc-------------cc------
Q 012492 155 EVEAGLME--YKPDIIISVHPLMQHIPLWVLKWQ---GLQKKVIFVTVITDLNTC--HP-------------TW------ 208 (462)
Q Consensus 155 ~l~~~l~~--~kPDvVi~~~~~~~~~~~~~~~~~---~~~~~iP~v~~~~d~~~~--~~-------------~~------ 208 (462)
...+++++ ++|||||++.-..+.+++++.+.. ....++|+|..+|..... .+ .+
T Consensus 130 a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~ 209 (489)
T PRK14098 130 GVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGD 209 (489)
T ss_pred HHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCC
Confidence 33445544 689999998744444444443321 111379999888864210 00 00
Q ss_pred -------ccCCCcEEEEcCHHHHHHHHHc-----CCC------CCcEEEcCCCCChhhhcccCC----------------
Q 012492 209 -------FHPRVNRCYCPSKEVAKRASYF-----GLE------VSQIRVFGLPIRPSFVRAVIS---------------- 254 (462)
Q Consensus 209 -------~~~~~d~~i~~s~~~~~~l~~~-----gi~------~~~i~v~g~pv~~~~~~~~~~---------------- 254 (462)
....+|.++++|+..++.+... |++ +.++.+++|+++.+.+.+..+
T Consensus 210 ~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~ 289 (489)
T PRK14098 210 EVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKL 289 (489)
T ss_pred cccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHH
Confidence 0145789999999999887642 443 578999999999876654221
Q ss_pred --hHHHHHHcCCCC--CCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH-HHHHHHhhc--cCCC
Q 012492 255 --KDNLRLELQMDP--ILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR-TLASTLQSE--EWKI 327 (462)
Q Consensus 255 --~~~~r~~l~l~~--~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~-~l~~~~~~~--~~~~ 327 (462)
+..+++++|++. +.++++++|+....|++..+++++ +.+.+ ++++++++ |.+. .+++.++++ ....
T Consensus 290 ~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~-~~l~~-----~~~~lviv-G~G~~~~~~~l~~l~~~~~~ 362 (489)
T PRK14098 290 ENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESL-EKLVE-----LDIQLVIC-GSGDKEYEKRFQDFAEEHPE 362 (489)
T ss_pred HHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHH-HHHHh-----cCcEEEEE-eCCCHHHHHHHHHHHHHCCC
Confidence 345677888863 455555555444455555555544 45543 35776554 5443 233333332 2346
Q ss_pred CeEEeccc--hhHHHHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHH
Q 012492 328 PVKVRGFE--TQMEKWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKET 399 (462)
Q Consensus 328 ~V~~~g~~--~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~l 399 (462)
+|.+.|.. +++..+|+.||+++.+|. |.+.+|||++|+|+|+++.++..+.. .....+.+.|++++ |++++
T Consensus 363 ~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v-~~~~~~~~~G~l~~~~d~~~l 441 (489)
T PRK14098 363 QVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETI-EEVSEDKGSGFIFHDYTPEAL 441 (489)
T ss_pred CEEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceee-ecCCCCCCceeEeCCCCHHHH
Confidence 89999877 356899999999999884 89999999999999998865432210 00011235677764 78999
Q ss_pred HHHHHHHhc--CCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 400 ARIVTEWFS--TKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 400 a~~i~~ll~--~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
+++|.+++. +|++.+++|++++. .+.++|+.+++.++++.++
T Consensus 442 a~ai~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~y~~lY~~ 485 (489)
T PRK14098 442 VAKLGEALALYHDEERWEELVLEAM--ERDFSWKNSAEEYAQLYRE 485 (489)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHh--cCCCChHHHHHHHHHHHHH
Confidence 999987542 57888888887663 4689999999999998764
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.7e-20 Score=178.51 Aligned_cols=286 Identities=16% Similarity=0.126 Sum_probs=153.4
Q ss_pred eEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHH-HHHHHHhhhHHHHHHhhcCCcchhhH
Q 012492 64 NVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMER-SYKFMVKHVQLWKVAFHSTSPKWIHS 142 (462)
Q Consensus 64 kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~-~y~~~~~~~~l~~~~~~~~~~~~~~~ 142 (462)
||+|..+++|.||..++.+|+++|++ || +|.+... +.....+.. .+.. +...+...............+
T Consensus 1 ril~~~~g~G~GH~~r~~ala~~L~~-g~---ev~~~~~-----~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~ 70 (321)
T TIGR00661 1 KILYSVCGEGFGHTTRSVAIGEALKN-DY---EVSYIAS-----GRSKNYISKYGFKV-FETFPGIKLKGEDGKVNIVKT 70 (321)
T ss_pred CEEEEEeccCccHHHHHHHHHHHHhC-CC---eEEEEEc-----CCHHHhhhhhcCcc-eeccCCceEeecCCcCcHHHH
Confidence 79999999989999999999999998 76 3333211 111111111 0100 000000000000000011111
Q ss_pred HHHH-HHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccccCCCcEEEEcCH
Q 012492 143 CYLA-AMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSK 221 (462)
Q Consensus 143 ~~~~-~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~~~~d~~i~~s~ 221 (462)
.... ........+..+++++++||+||+++.+.+ .++++. .+||++.+.++.....+.. .+ .. +.
T Consensus 71 l~~~~~~~~~~~~~~~~~l~~~~pDlVi~d~~~~~---~~aA~~----~~iP~i~i~~q~~~~~~~~----~~-~~--~~ 136 (321)
T TIGR00661 71 LRNKEYSPKKAIRREINIIREYNPDLIISDFEYST---VVAAKL----LKIPVICISNQNYTRYPLK----TD-LI--VY 136 (321)
T ss_pred HHhhccccHHHHHHHHHHHHhcCCCEEEECCchHH---HHHHHh----cCCCEEEEecchhhcCCcc----cc-hh--HH
Confidence 1100 000123445668899999999999987765 345554 4899997765432111111 01 00 11
Q ss_pred HHHHHHHHc-------CCCCCcEEEcCCCCChhhhc-c--cCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHH
Q 012492 222 EVAKRASYF-------GLEVSQIRVFGLPIRPSFVR-A--VISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALG 291 (462)
Q Consensus 222 ~~~~~l~~~-------gi~~~~i~v~g~pv~~~~~~-~--~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~ 291 (462)
.....+... +.+..+....++| .+.. . +..+....+ + .+.+.+.+|+++|+.+.. .++..+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~~~~~~~~~-~-~~~~~~~iLv~~g~~~~~---~l~~~l- 207 (321)
T TIGR00661 137 PTMAALRIFNERCERFIVPDYPFPYTICP---KIIKNMEGPLIRYDVDD-V-DNYGEDYILVYIGFEYRY---KILELL- 207 (321)
T ss_pred HHHHHHHHhccccceEeeecCCCCCCCCc---cccccCCCcccchhhhc-c-ccCCCCcEEEECCcCCHH---HHHHHH-
Confidence 111111110 1111111112222 1111 0 011111111 1 133457788888775532 233322
Q ss_pred HhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccc-hhHHHHHHhcchheecCChhhHHHHHHhCCCEEEe
Q 012492 292 ESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFE-TQMEKWMGACDCIITKAGPGTIAEALIRGLPIILN 370 (462)
Q Consensus 292 ~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~-~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~ 370 (462)
+. .+++. +++|......+ ....|+.+.+|. ++|.++|..||++|+++|.+|++||+++|+|+|+.
T Consensus 208 ~~-------~~~~~--~i~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~~ad~vI~~~G~~t~~Ea~~~g~P~l~i 273 (321)
T TIGR00661 208 GK-------IANVK--FVCYSYEVAKN-----SYNENVEIRRITTDNFKELIKNAELVITHGGFSLISEALSLGKPLIVI 273 (321)
T ss_pred Hh-------CCCeE--EEEeCCCCCcc-----ccCCCEEEEECChHHHHHHHHhCCEEEECCChHHHHHHHHcCCCEEEE
Confidence 22 23333 34443321111 234689999998 59999999999999999999999999999999999
Q ss_pred cCCC-CccccchHHHHHCCceeeeCCH
Q 012492 371 DYIP-GQEKGNVPYVVDNGAGVFTRSP 396 (462)
Q Consensus 371 ~~~~-~~~~~n~~~l~~~G~g~~~~~~ 396 (462)
|..+ .+|..|+..+.+.|+|+.+...
T Consensus 274 p~~~~~eQ~~na~~l~~~g~~~~l~~~ 300 (321)
T TIGR00661 274 PDLGQFEQGNNAVKLEDLGCGIALEYK 300 (321)
T ss_pred cCCCcccHHHHHHHHHHCCCEEEcChh
Confidence 9864 3667799999999999887643
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-18 Score=175.31 Aligned_cols=265 Identities=11% Similarity=0.017 Sum_probs=176.6
Q ss_pred HHHHHHHHHHHHhhCCCEEEECCcccchHH---HHHHHHcCCCCCCeEEEEec-CCCCC---Cc-------------ccc
Q 012492 150 AYYAKEVEAGLMEYKPDIIISVHPLMQHIP---LWVLKWQGLQKKVIFVTVIT-DLNTC---HP-------------TWF 209 (462)
Q Consensus 150 ~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~---~~~~~~~~~~~~iP~v~~~~-d~~~~---~~-------------~~~ 209 (462)
....-.+.+.+..++|||||...|..-+.. +.+++. .+ |+|.++| ++... +. .|+
T Consensus 420 I~p~gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArK----l~-PVVasyHTny~eYl~~y~~g~L~~~llk~l~~~v 494 (794)
T PLN02501 420 IIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDK----FN-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWV 494 (794)
T ss_pred ccchHHHHHHhhccCCCEEEECCchhhccHHHHHHHHHH----cC-CeEEEEeCCcHHHHhHhcchhHHHHHHHHHHHHH
Confidence 344567888999999999999998754431 223332 36 7886554 44210 00 122
Q ss_pred cCC-CcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHH
Q 012492 210 HPR-VNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAM 288 (462)
Q Consensus 210 ~~~-~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~ 288 (462)
... +|+++++|..+. .+ +...+. ..++|+..++.+ ..+...+++++++...+.++++|+....|++..++.
T Consensus 495 ~r~hcD~VIaPS~atq-~L-----~~~vI~-nVnGVDte~F~P-~~r~~~~r~lgi~~~~kgiLfVGRLa~EKGld~LLe 566 (794)
T PLN02501 495 TRAYCHKVLRLSAATQ-DL-----PKSVIC-NVHGVNPKFLKI-GEKVAEERELGQQAFSKGAYFLGKMVWAKGYRELID 566 (794)
T ss_pred HHhhCCEEEcCCHHHH-Hh-----ccccee-ecccccccccCC-cchhHHHHhcCCccccCceEEEEcccccCCHHHHHH
Confidence 222 799999997766 33 222222 226898887775 333334456777554455666776666677777776
Q ss_pred HHHHhhhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCC----hhhHHHHH
Q 012492 289 ALGESLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAG----PGTIAEAL 361 (462)
Q Consensus 289 ~l~~~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg----~~t~~EAl 361 (462)
++ +.+.+ ..++++++ ++|+++ ++.+.+.++++ +|.|.|+.++..++|+.+|+||.+|. |++++|||
T Consensus 567 Al-a~L~~---~~pnvrLv-IVGDGP~reeLe~la~eLgL--~V~FLG~~dd~~~lyasaDVFVlPS~sEgFGlVlLEAM 639 (794)
T PLN02501 567 LL-AKHKN---ELDGFNLD-VFGNGEDAHEVQRAAKRLDL--NLNFLKGRDHADDSLHGYKVFINPSISDVLCTATAEAL 639 (794)
T ss_pred HH-HHHHh---hCCCeEEE-EEcCCccHHHHHHHHHHcCC--EEEecCCCCCHHHHHHhCCEEEECCCcccchHHHHHHH
Confidence 65 34433 24677755 456654 24455555554 58999999888899999999999884 99999999
Q ss_pred HhCCCEEEecCCCCccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Q 012492 362 IRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLA 441 (462)
Q Consensus 362 a~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~ 441 (462)
|||+|||+++.++.. .+.+.+.++...++++++++|.++| .++..+..+.+ ...++|+.+++.+++..
T Consensus 640 A~GlPVVATd~pG~e------~V~~g~nGll~~D~EafAeAI~~LL-sd~~~rl~~~a-----~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 640 AMGKFVVCADHPSNE------FFRSFPNCLTYKTSEDFVAKVKEAL-ANEPQPLTPEQ-----RYNLSWEAATQRFMEYS 707 (794)
T ss_pred HcCCCEEEecCCCCc------eEeecCCeEecCCHHHHHHHHHHHH-hCchhhhHHHH-----HhhCCHHHHHHHHHHhh
Confidence 999999999986421 1223345666788999999999999 56665544432 33889999999999988
Q ss_pred hccCC
Q 012492 442 AQRGP 446 (462)
Q Consensus 442 ~~~~~ 446 (462)
+-+..
T Consensus 708 ~~~~~ 712 (794)
T PLN02501 708 DLDKV 712 (794)
T ss_pred ccccc
Confidence 65443
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.9e-17 Score=153.75 Aligned_cols=343 Identities=15% Similarity=0.196 Sum_probs=210.0
Q ss_pred CCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEE-EEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchh
Q 012492 62 TKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIF-VKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWI 140 (462)
Q Consensus 62 ~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~-v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 140 (462)
|+||++.++.. +|...-+. |.++|+++.++ ++++ ++.-.-...| +. ..|+. . .+--+++.. .+
T Consensus 1 ~~ki~i~AGE~-SGDllGa~-LikaLk~~~~~-~efvGvgG~~m~aeG--~~---sl~~~-~---elsvmGf~E----VL 64 (381)
T COG0763 1 MLKIALSAGEA-SGDLLGAG-LIKALKARYPD-VEFVGVGGEKMEAEG--LE---SLFDM-E---ELSVMGFVE----VL 64 (381)
T ss_pred CceEEEEeccc-chhhHHHH-HHHHHHhhCCC-eEEEEeccHHHHhcc--Cc---cccCH-H---HHHHhhHHH----HH
Confidence 57999999999 79988875 99999999864 3422 2211000011 11 11110 0 111111211 12
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECC-cccchHHHHHHHHcCCCCCCeEEEEecCCCCCCccccc---------
Q 012492 141 HSCYLAAMAAYYAKEVEAGLMEYKPDIIISVH-PLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFH--------- 210 (462)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~-~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~--------- 210 (462)
..++ ..+...+++.+.+.+.+||++|+.. |-.+.......|..+ +++|+|.|++-. -|.+
T Consensus 65 ~~lp---~llk~~~~~~~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~--p~i~iihYV~Ps-----VWAWr~~Ra~~i~ 134 (381)
T COG0763 65 GRLP---RLLKIRRELVRYILANKPDVLILIDSPDFNLRVAKKLRKAG--PKIKIIHYVSPS-----VWAWRPKRAVKIA 134 (381)
T ss_pred HHHH---HHHHHHHHHHHHHHhcCCCEEEEeCCCCCchHHHHHHHHhC--CCCCeEEEECcc-----eeeechhhHHHHH
Confidence 2222 2234566788889999999887554 544443222233332 579999887632 3443
Q ss_pred CCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCc--cHHHHHH
Q 012492 211 PRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMG--PVKETAM 288 (462)
Q Consensus 211 ~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~--~~~~~l~ 288 (462)
+.+|++++..+...+.+.+.|++ .+++|+|+-++... ..+++.+|++++++.+.+++++..||.+.+ .+...+.
T Consensus 135 ~~~D~lLailPFE~~~y~k~g~~---~~yVGHpl~d~i~~-~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~ 210 (381)
T COG0763 135 KYVDHLLAILPFEPAFYDKFGLP---CTYVGHPLADEIPL-LPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFV 210 (381)
T ss_pred HHhhHeeeecCCCHHHHHhcCCC---eEEeCChhhhhccc-cccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHH
Confidence 34788888888788888888885 78999998776642 257888999999999999999999988753 2334444
Q ss_pred HHHHhhhcccCCCCCceEEEEccCCHHHHHHHh-hccCC---CCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhC
Q 012492 289 ALGESLLDKETGRPIGQLIIICGRNRTLASTLQ-SEEWK---IPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRG 364 (462)
Q Consensus 289 ~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~-~~~~~---~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G 364 (462)
.+++.+++ +.|+.++++-+-... .+.... .+.+. .++.+.+ .+-.+.|.+||+.+..||. +.+|++.+|
T Consensus 211 ~a~~~l~~---~~~~~~~vlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~a~~~aD~al~aSGT-~tLE~aL~g 283 (381)
T COG0763 211 QAAQELKA---RYPDLKFVLPLVNAK-YRRIIEEALKWEVAGLSLILID--GEKRKAFAAADAALAASGT-ATLEAALAG 283 (381)
T ss_pred HHHHHHHh---hCCCceEEEecCcHH-HHHHHHHHhhccccCceEEecC--chHHHHHHHhhHHHHhccH-HHHHHHHhC
Confidence 55566664 367888777555443 111111 11122 2222222 3456899999999999985 569999999
Q ss_pred CCEEEecCCCCccccchHHHHHCCcee---------eeC-------CHHHHHHHHHHHhcCCHHHHHHHHHHHHhh---c
Q 012492 365 LPIILNDYIPGQEKGNVPYVVDNGAGV---------FTR-------SPKETARIVTEWFSTKTDELKRMSENALKL---A 425 (462)
Q Consensus 365 ~PvI~~~~~~~~~~~n~~~l~~~G~g~---------~~~-------~~~~la~~i~~ll~~d~~~~~~m~~~a~~~---~ 425 (462)
+|+|+..-...--..-+..++.-...- +++ .++.+++++..++ .|+..++++.+..+++ .
T Consensus 284 ~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll-~~~~~~~~~~~~~~~l~~~l 362 (381)
T COG0763 284 TPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELL-LNGDRREALKEKFRELHQYL 362 (381)
T ss_pred CCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHh-cChHhHHHHHHHHHHHHHHH
Confidence 999998754221111222222222110 111 3889999999999 6876666666655443 2
Q ss_pred CCc-HHHHHHHHHHHHHh
Q 012492 426 QPE-AVVDIVKDIHDLAA 442 (462)
Q Consensus 426 ~~~-~~~~ia~~i~~l~~ 442 (462)
... +.+..|+.+.++++
T Consensus 363 ~~~~~~e~aA~~vl~~~~ 380 (381)
T COG0763 363 REDPASEIAAQAVLELLL 380 (381)
T ss_pred cCCcHHHHHHHHHHHHhc
Confidence 344 67788888877664
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-16 Score=152.51 Aligned_cols=351 Identities=15% Similarity=0.125 Sum_probs=225.8
Q ss_pred CCCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCc-hhhHHHHHHHHhhh-HHHHHHhhcCCcc
Q 012492 61 RTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPL-NDMERSYKFMVKHV-QLWKVAFHSTSPK 138 (462)
Q Consensus 61 ~~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~-~~~~~~y~~~~~~~-~l~~~~~~~~~~~ 138 (462)
.||||+++.+-- =...-...|..++++.+. .+..++- +|.-. ..+...|....... +.|.+...... .
T Consensus 2 ~~~Kv~~I~GTR--PE~iKmapli~~~~~~~~--~~~~vi~-----TGQH~d~em~~~~le~~~i~~pdy~L~i~~~~-~ 71 (383)
T COG0381 2 KMLKVLTIFGTR--PEAIKMAPLVKALEKDPD--FELIVIH-----TGQHRDYEMLDQVLELFGIRKPDYDLNIMKPG-Q 71 (383)
T ss_pred CceEEEEEEecC--HHHHHHhHHHHHHHhCCC--CceEEEE-----ecccccHHHHHHHHHHhCCCCCCcchhccccC-C
Confidence 467888886543 222344568899988742 3444442 22111 12333332222211 22222111000 0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHH-HHHHHcCCCCCCeEEEEecCCCCCCcc--------cc
Q 012492 139 WIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPL-WVLKWQGLQKKVIFVTVITDLNTCHPT--------WF 209 (462)
Q Consensus 139 ~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~-~~~~~~~~~~~iP~v~~~~d~~~~~~~--------~~ 209 (462)
.+.. .-......+.+++.+.+||+|++++......+. +++.+ .+||+.++.....+.... ..
T Consensus 72 tl~~-----~t~~~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa~~----~~IpV~HvEAGlRt~~~~~PEE~NR~l~ 142 (383)
T COG0381 72 TLGE-----ITGNIIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAAFY----LKIPVGHVEAGLRTGDLYFPEEINRRLT 142 (383)
T ss_pred CHHH-----HHHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHHH----hCCceEEEecccccCCCCCcHHHHHHHH
Confidence 1111 112334567788999999999998876554432 23333 489998876654321111 12
Q ss_pred cCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcc---cCChHHHHHH-cCCCCCCcEEEEEeCCCCC--ccH
Q 012492 210 HPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRA---VISKDNLRLE-LQMDPILPAVLLMGGGEGM--GPV 283 (462)
Q Consensus 210 ~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~---~~~~~~~r~~-l~l~~~~~~iLv~gG~~~~--~~~ 283 (462)
...++..+++++..++.+.+.|+++++|.++||++-+.+... ..+....... +. ++++.++|+++.+... +.+
T Consensus 143 ~~~S~~hfapte~ar~nLl~EG~~~~~IfvtGnt~iDal~~~~~~~~~~~~~~~~~~~-~~~~~~iLvT~HRreN~~~~~ 221 (383)
T COG0381 143 SHLSDLHFAPTEIARKNLLREGVPEKRIFVTGNTVIDALLNTRDRVLEDSKILAKGLD-DKDKKYILVTAHRRENVGEPL 221 (383)
T ss_pred HHhhhhhcCChHHHHHHHHHcCCCccceEEeCChHHHHHHHHHhhhccchhhHHhhhc-cccCcEEEEEcchhhcccccH
Confidence 234677899999999999999999999999999986654332 1111122222 33 3445689999876532 345
Q ss_pred HHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHH-hhccCCCCeEEeccc--hhHHHHHHhcchheecCChhhHHHH
Q 012492 284 KETAMALGESLLDKETGRPIGQLIIICGRNRTLASTL-QSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAGPGTIAEA 360 (462)
Q Consensus 284 ~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~-~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg~~t~~EA 360 (462)
.+++.++.+.+.+ +++..++.-+-.++.+++.. +.++...+++++..+ .++..+|..|-++++.|||. .-||
T Consensus 222 ~~i~~al~~i~~~----~~~~~viyp~H~~~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~iltDSGgi-qEEA 296 (383)
T COG0381 222 EEICEALREIAEE----YPDVIVIYPVHPRPRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFLILTDSGGI-QEEA 296 (383)
T ss_pred HHHHHHHHHHHHh----CCCceEEEeCCCChhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceEEEecCCch-hhhH
Confidence 5666555443332 45677776666665443333 445666778887665 57889999999999999965 5889
Q ss_pred HHhCCCEEEecCCCCccccchHHHHHCCceeeeC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHH
Q 012492 361 LIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR-SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHD 439 (462)
Q Consensus 361 la~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~-~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~ 439 (462)
..+|+||++......+.+ .++.|...++. +.+.+.+++.+++ .+++.+++|+...-.+.+..++++|++.+..
T Consensus 297 p~lg~Pvl~lR~~TERPE-----~v~agt~~lvg~~~~~i~~~~~~ll-~~~~~~~~m~~~~npYgdg~as~rIv~~l~~ 370 (383)
T COG0381 297 PSLGKPVLVLRDTTERPE-----GVEAGTNILVGTDEENILDAATELL-EDEEFYERMSNAKNPYGDGNASERIVEILLN 370 (383)
T ss_pred HhcCCcEEeeccCCCCcc-----ceecCceEEeCccHHHHHHHHHHHh-hChHHHHHHhcccCCCcCcchHHHHHHHHHH
Confidence 999999999987654332 46678777775 6889999999999 7999999999998889998899999999998
Q ss_pred HHh
Q 012492 440 LAA 442 (462)
Q Consensus 440 l~~ 442 (462)
.+.
T Consensus 371 ~~~ 373 (383)
T COG0381 371 YFD 373 (383)
T ss_pred Hhh
Confidence 775
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.1e-17 Score=156.95 Aligned_cols=330 Identities=17% Similarity=0.173 Sum_probs=210.1
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhH
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHS 142 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 142 (462)
-=|+|.+.|+ |....+..|.++|+++.|+ ..+.++.. ++.........|...+. +..
T Consensus 50 p~vWiHaaSV--GEv~a~~pLv~~l~~~~P~-~~ilvTt~----T~Tg~e~a~~~~~~~v~---------h~Y------- 106 (419)
T COG1519 50 PLVWIHAASV--GEVLAALPLVRALRERFPD-LRILVTTM----TPTGAERAAALFGDSVI---------HQY------- 106 (419)
T ss_pred CeEEEEecch--hHHHHHHHHHHHHHHhCCC-CCEEEEec----CccHHHHHHHHcCCCeE---------EEe-------
Confidence 3699999999 8999999999999999765 35454432 22222222222211111 000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCEEEECCc--ccchHHHHHHHHcCCCCCCeEEEEecCCCC-CCccc---------cc
Q 012492 143 CYLAAMAAYYAKEVEAGLMEYKPDIIISVHP--LMQHIPLWVLKWQGLQKKVIFVTVITDLNT-CHPTW---------FH 210 (462)
Q Consensus 143 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~--~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~-~~~~~---------~~ 210 (462)
..+.....+.++++.++||++|.... |++.+ ..++. .++|.+.+..-.+. ++++| +.
T Consensus 107 -----lP~D~~~~v~rFl~~~~P~l~Ii~EtElWPnli--~e~~~----~~~p~~LvNaRLS~rS~~~y~k~~~~~~~~~ 175 (419)
T COG1519 107 -----LPLDLPIAVRRFLRKWRPKLLIIMETELWPNLI--NELKR----RGIPLVLVNARLSDRSFARYAKLKFLARLLF 175 (419)
T ss_pred -----cCcCchHHHHHHHHhcCCCEEEEEeccccHHHH--HHHHH----cCCCEEEEeeeechhhhHHHHHHHHHHHHHH
Confidence 00112223457899999998876664 44433 34443 38999876543221 12222 23
Q ss_pred CCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcc--cCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHH
Q 012492 211 PRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRA--VISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAM 288 (462)
Q Consensus 211 ~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~--~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~ 288 (462)
+..|.+++.|+.+.+++...|.++ +.++||--......+ ....+..|.+++.+ ++++ +.++. -. +-++++.
T Consensus 176 ~~i~li~aQse~D~~Rf~~LGa~~--v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~--r~v~-iaaST-H~-GEeei~l 248 (419)
T COG1519 176 KNIDLILAQSEEDAQRFRSLGAKP--VVVTGNLKFDIEPPPQLAAELAALRRQLGGH--RPVW-VAAST-HE-GEEEIIL 248 (419)
T ss_pred HhcceeeecCHHHHHHHHhcCCcc--eEEecceeecCCCChhhHHHHHHHHHhcCCC--CceE-EEecC-CC-chHHHHH
Confidence 567999999999999999999864 899998421111110 01234667777653 5544 43333 22 2234444
Q ss_pred HHHHhhhcccCCCCCceEEEEccCCHH----HHHHHhhcc-------------CCCCeEEeccchhHHHHHHhcchhe-e
Q 012492 289 ALGESLLDKETGRPIGQLIIICGRNRT----LASTLQSEE-------------WKIPVKVRGFETQMEKWMGACDCII-T 350 (462)
Q Consensus 289 ~l~~~l~~~~~~~~~~~~lvv~G~~~~----l~~~~~~~~-------------~~~~V~~~g~~~~~~~l~~~aD~vV-~ 350 (462)
.+.+.|++ +.|+..+|+| -+..+ ..+.++..+ .+.+|.+.+...+|..+|..||+.+ .
T Consensus 249 ~~~~~l~~---~~~~~llIlV-PRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVG 324 (419)
T COG1519 249 DAHQALKK---QFPNLLLILV-PRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVG 324 (419)
T ss_pred HHHHHHHh---hCCCceEEEe-cCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEEC
Confidence 44455554 3577655554 44432 334444322 2346777777789999999999854 3
Q ss_pred c----CChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcC
Q 012492 351 K----AGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQ 426 (462)
Q Consensus 351 ~----sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~ 426 (462)
- -||..++|++++|+|+|.-|...++. ..++.+.+.|.++.+++.+.+++.+..++ +|++.|++|++++.+...
T Consensus 325 GSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~-ei~~~l~~~ga~~~v~~~~~l~~~v~~l~-~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 325 GSLVPIGGHNPLEPAAFGTPVIFGPYTFNFS-DIAERLLQAGAGLQVEDADLLAKAVELLL-ADEDKREAYGRAGLEFLA 402 (419)
T ss_pred CcccCCCCCChhhHHHcCCCEEeCCccccHH-HHHHHHHhcCCeEEECCHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHH
Confidence 3 36889999999999999998866543 36778889999999999888888888888 789999999999988764
Q ss_pred C--cHHHHHHHHHHH
Q 012492 427 P--EAVVDIVKDIHD 439 (462)
Q Consensus 427 ~--~~~~~ia~~i~~ 439 (462)
. .+.++..+.+..
T Consensus 403 ~~~gal~r~l~~l~~ 417 (419)
T COG1519 403 QNRGALARTLEALKP 417 (419)
T ss_pred HhhHHHHHHHHHhhh
Confidence 3 344555555543
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.7e-17 Score=162.83 Aligned_cols=226 Identities=16% Similarity=0.181 Sum_probs=143.6
Q ss_pred HHhhCCCEEEECCcccch--HHH-HHHHHcCCCCCCeEEEEecCCCC--C-------C---------cccccCCCcEEEE
Q 012492 160 LMEYKPDIIISVHPLMQH--IPL-WVLKWQGLQKKVIFVTVITDLNT--C-------H---------PTWFHPRVNRCYC 218 (462)
Q Consensus 160 l~~~kPDvVi~~~~~~~~--~~~-~~~~~~~~~~~iP~v~~~~d~~~--~-------~---------~~~~~~~~d~~i~ 218 (462)
.+.++||+||++.+.... ... .+++. .++|+|...|+... . . ..|+++.+|.+++
T Consensus 96 ~~~~~~DvV~~~~~~~~~~~~~~~~~~~~----~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~ 171 (371)
T PLN02275 96 VKIPRPDVFLVQNPPSVPTLAVVKLACWL----RRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHLC 171 (371)
T ss_pred hhCCCCCEEEEeCCCCcHHHHHHHHHHHH----hCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHHHHHHhhCCEEEE
Confidence 467899999987654322 112 22332 37899877777521 0 0 1234567899999
Q ss_pred cCHHHHHHHHHc-CCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCC-ccHHHHHHHHHHhhhc
Q 012492 219 PSKEVAKRASYF-GLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGM-GPVKETAMALGESLLD 296 (462)
Q Consensus 219 ~s~~~~~~l~~~-gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~-~~~~~~l~~l~~~l~~ 296 (462)
+|+.+++.+.+. |++ +.+++|+....| .+ .... . .+.++.+.++++.|+.+. ++...++.++ ..+..
T Consensus 172 ~S~~~~~~l~~~~g~~---i~vi~n~~~~~f-~~-~~~~---~--~~~~~~~~~i~~~grl~~~k~~~~li~a~-~~l~~ 240 (371)
T PLN02275 172 VTKAMQHELDQNWGIR---ATVLYDQPPEFF-RP-ASLE---I--RLRPNRPALVVSSTSWTPDEDFGILLEAA-VMYDR 240 (371)
T ss_pred CCHHHHHHHHHhcCCC---eEEECCCCHHHc-Cc-CCch---h--cccCCCcEEEEEeCceeccCCHHHHHHHH-HHHHh
Confidence 999999998764 664 788888753333 32 1111 1 112233445555566654 4555554443 33321
Q ss_pred c-----c---------CCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEec-cc--hhHHHHHHhcchheec--C--
Q 012492 297 K-----E---------TGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRG-FE--TQMEKWMGACDCIITK--A-- 352 (462)
Q Consensus 297 ~-----~---------~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g-~~--~~~~~l~~~aD~vV~~--s-- 352 (462)
. . ..+|++++++ +|+++ ++++.++++++.+ +.|.+ ++ +++..+|+.||++|++ +
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~i~l~i-vG~G~~~~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~ 318 (371)
T PLN02275 241 RVAARLNESDSASGKQSLYPRLLFII-TGKGPQKAMYEEKISRLNLRH-VAFRTMWLEAEDYPLLLGSADLGVSLHTSSS 318 (371)
T ss_pred hhhhccccccccccccccCCCeEEEE-EeCCCCHHHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHHHhCCEEEEeccccc
Confidence 0 0 1246777654 55554 3666777777764 88765 54 8999999999999853 1
Q ss_pred ---ChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeCCHHHHHHHHHHHh
Q 012492 353 ---GPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWF 407 (462)
Q Consensus 353 ---g~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll 407 (462)
.|++++|||+||+|+|+++.++ +.+.+.+.++|++++++++++++|.+++
T Consensus 319 ~e~~p~~llEAmA~G~PVVa~~~gg-----~~eiv~~g~~G~lv~~~~~la~~i~~l~ 371 (371)
T PLN02275 319 GLDLPMKVVDMFGCGLPVCAVSYSC-----IGELVKDGKNGLLFSSSSELADQLLELL 371 (371)
T ss_pred cccccHHHHHHHHCCCCEEEecCCC-----hHHHccCCCCeEEECCHHHHHHHHHHhC
Confidence 2789999999999999987532 3334445557999999999999998874
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.4e-17 Score=165.30 Aligned_cols=168 Identities=20% Similarity=0.199 Sum_probs=134.3
Q ss_pred CCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHHH
Q 012492 264 MDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMG 343 (462)
Q Consensus 264 l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~ 343 (462)
++.+++.++++.|+.+.. .+++..+.+.+.+ .+.++++..|. .+. . .-+.+.|+...+|++. .+++.
T Consensus 233 ~~~d~~~vyvslGt~~~~--~~l~~~~~~a~~~-----l~~~vi~~~~~-~~~--~--~~~~p~n~~v~~~~p~-~~~l~ 299 (406)
T COG1819 233 IPADRPIVYVSLGTVGNA--VELLAIVLEALAD-----LDVRVIVSLGG-ARD--T--LVNVPDNVIVADYVPQ-LELLP 299 (406)
T ss_pred hcCCCCeEEEEcCCcccH--HHHHHHHHHHHhc-----CCcEEEEeccc-ccc--c--cccCCCceEEecCCCH-HHHhh
Confidence 556788899998888754 5666666666654 35677776665 221 1 1246789999999964 57999
Q ss_pred hcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHHHHHHHH
Q 012492 344 ACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDELKRMSE 419 (462)
Q Consensus 344 ~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~~~~m~~ 419 (462)
.||+||+++|.+|++||+.+|+|+|+.|...+| ..|+..+.+.|+|..++ .++.++++|.++| +|+..+++..+
T Consensus 300 ~ad~vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ-~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL-~~~~~~~~~~~ 377 (406)
T COG1819 300 RADAVIHHGGAGTTSEALYAGVPLVVIPDGADQ-PLNAERVEELGAGIALPFEELTEERLRAAVNEVL-ADDSYRRAAER 377 (406)
T ss_pred hcCEEEecCCcchHHHHHHcCCCEEEecCCcch-hHHHHHHHHcCCceecCcccCCHHHHHHHHHHHh-cCHHHHHHHHH
Confidence 999999999999999999999999999987554 56999999999998765 5889999999999 78888888887
Q ss_pred HHHhhcCCcHHHHHHHHHHHHHhccCC
Q 012492 420 NALKLAQPEAVVDIVKDIHDLAAQRGP 446 (462)
Q Consensus 420 ~a~~~~~~~~~~~ia~~i~~l~~~~~~ 446 (462)
..+......+...+++.|++...++..
T Consensus 378 ~~~~~~~~~g~~~~a~~le~~~~~~~~ 404 (406)
T COG1819 378 LAEEFKEEDGPAKAADLLEEFAREKKK 404 (406)
T ss_pred HHHHhhhcccHHHHHHHHHHHHhcccC
Confidence 777777778888999999998877643
|
|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.1e-17 Score=163.93 Aligned_cols=254 Identities=16% Similarity=0.155 Sum_probs=163.7
Q ss_pred HhhCCCEEEECCcccchHHHHHHHHcCCCCCCe-EEEEecCCCCC----Cc------ccccCCCcEEEEcCHHHHHHHHH
Q 012492 161 MEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVI-FVTVITDLNTC----HP------TWFHPRVNRCYCPSKEVAKRASY 229 (462)
Q Consensus 161 ~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP-~v~~~~d~~~~----~~------~~~~~~~d~~i~~s~~~~~~l~~ 229 (462)
.+.++|++++.........+...+.. ...+ +|...|.+... .. .+..+.+|.++++|+..++.+.+
T Consensus 124 ~~~~~~v~~sy~~~~~~~~~~~l~~~---~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~ 200 (407)
T cd04946 124 IDGQGTVFYSYWLHETAYALALLKKE---YLRKRVISRAHGYDLYEDRYPSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK 200 (407)
T ss_pred cccCceEEEEecCchHHHHHHHHHHh---cCCceEEEEeccchhhhhhccccchHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 34556777765433322222222221 2343 77767744310 00 12345789999999999988875
Q ss_pred -cCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceE-E
Q 012492 230 -FGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQL-I 307 (462)
Q Consensus 230 -~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~-l 307 (462)
.+...+++.+++++++....... ...++.+.++.+|.....+++..+++++ ..+.+. .|+..+ +
T Consensus 201 ~~~~~~~ki~vi~~gv~~~~~~~~----------~~~~~~~~il~~Grl~~~Kg~~~li~a~-~~l~~~---~p~~~l~~ 266 (407)
T cd04946 201 RYPAYKEKIKVSYLGVSDPGIISK----------PSKDDTLRIVSCSYLVPVKRVDLIIKAL-AALAKA---RPSIKIKW 266 (407)
T ss_pred HCCCccccEEEEECCcccccccCC----------CCCCCCEEEEEeeccccccCHHHHHHHH-HHHHHh---CCCceEEE
Confidence 36666788899998875433211 0122344455555444456666666655 444432 343332 2
Q ss_pred EEccCCH---HHHHHHhhccCCCCeEEeccc--hhHHHHHHh--cchheecCC----hhhHHHHHHhCCCEEEecCCCCc
Q 012492 308 IICGRNR---TLASTLQSEEWKIPVKVRGFE--TQMEKWMGA--CDCIITKAG----PGTIAEALIRGLPIILNDYIPGQ 376 (462)
Q Consensus 308 vv~G~~~---~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~--aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~ 376 (462)
++.|.+. .+.+.+++.+...+|+|.|++ +++..+|+. ||+++.+|. |++++|||++|+|||+++.++
T Consensus 267 ~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg-- 344 (407)
T cd04946 267 THIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG-- 344 (407)
T ss_pred EEEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC--
Confidence 3345543 244455555667889999998 478899976 677887764 889999999999999998643
Q ss_pred cccchHHHHHCC-ceeeeC---CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc-CCcHHHHHHHHHH
Q 012492 377 EKGNVPYVVDNG-AGVFTR---SPKETARIVTEWFSTKTDELKRMSENALKLA-QPEAVVDIVKDIH 438 (462)
Q Consensus 377 ~~~n~~~l~~~G-~g~~~~---~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~-~~~~~~~ia~~i~ 438 (462)
..+ +++.| .|+++. ++++++++|.+++ +|++.+++|++++++.. +.++++.+.+.+.
T Consensus 345 ---~~e-~i~~~~~G~l~~~~~~~~~la~~I~~ll-~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 345 ---TPE-IVDNGGNGLLLSKDPTPNELVSSLSKFI-DNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred ---cHH-HhcCCCcEEEeCCCCCHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 222 44455 787764 5799999999999 69999999999999987 4678888777653
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.5e-17 Score=155.69 Aligned_cols=234 Identities=17% Similarity=0.141 Sum_probs=157.0
Q ss_pred CCeEEEEecCCCC--CCcccccCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccC-ChHHHHHHcCCC-C
Q 012492 191 KVIFVTVITDLNT--CHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVI-SKDNLRLELQMD-P 266 (462)
Q Consensus 191 ~iP~v~~~~d~~~--~~~~~~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~-~~~~~r~~l~l~-~ 266 (462)
+.|+++..|.... .+.+|..+. +.++++|+.+++.+.+.|++.. +. +.++++.+.+.+.. ...+.+++++.+ +
T Consensus 70 ~~~~~tt~~g~~~~~~y~~~m~~~-~~vIavS~~t~~~L~~~G~~~~-i~-I~~GVD~~~f~p~~~~~~~~r~~~~~~~~ 146 (335)
T PHA01633 70 KKYFYTTCDGIPNIEIVNKYLLQD-VKFIPNSKFSAENLQEVGLQVD-LP-VFHGINFKIVENAEKLVPQLKQKLDKDFP 146 (335)
T ss_pred CCceEEeeCCcCchHHHHHHHhcC-CEEEeCCHHHHHHHHHhCCCCc-ee-eeCCCChhhcCccchhhHHHHHHhCcCCC
Confidence 5678876665431 223344443 5889999999999998888754 43 45688866554322 224567777653 3
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCC----ceEEEEccCCHHHHHHHhhccCCCCeEEec---cc--hh
Q 012492 267 ILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPI----GQLIIICGRNRTLASTLQSEEWKIPVKVRG---FE--TQ 337 (462)
Q Consensus 267 ~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~----~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g---~~--~~ 337 (462)
+.+.++++|+....|+...+++++ +.+.++ .|+ ++++ +.|.. .++++++.++|+|.| +. ++
T Consensus 147 ~~~~i~~vGRl~~~KG~~~LI~A~-~~L~~~---~p~~~~~i~l~-ivG~~-----~~~~l~l~~~V~f~g~~G~~~~~d 216 (335)
T PHA01633 147 DTIKFGIVSGLTKRKNMDLMLQVF-NELNTK---YPDIAKKIHFF-VISHK-----QFTQLEVPANVHFVAEFGHNSREY 216 (335)
T ss_pred CCeEEEEEeCCccccCHHHHHHHH-HHHHHh---CCCccccEEEE-EEcHH-----HHHHcCCCCcEEEEecCCCCCHHH
Confidence 455566666555566666666655 455442 343 3544 34532 234556778999985 33 68
Q ss_pred HHHHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCcc-----------ccchHHHH--HCCceeeeC--CHHH
Q 012492 338 MEKWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQE-----------KGNVPYVV--DNGAGVFTR--SPKE 398 (462)
Q Consensus 338 ~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~-----------~~n~~~l~--~~G~g~~~~--~~~~ 398 (462)
+.++|+.||++|++|. |++++|||++|+|||+++.++-.+ ..++..+. ++|.|+.++ ++++
T Consensus 217 l~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~ 296 (335)
T PHA01633 217 IFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIED 296 (335)
T ss_pred HHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHH
Confidence 9999999999999873 999999999999999998864322 12333333 356677654 8999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHH
Q 012492 399 TARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHD 439 (462)
Q Consensus 399 la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~ 439 (462)
++++|.++++ .. .+..++.++++.+++++++++++.|++
T Consensus 297 la~ai~~~~~-~~-~~~~~~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 297 MANAIILAFE-LQ-DREERSMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred HHHHHHHHHh-cc-ChhhhhHHHHHHHHhcCHHHHHHHhhC
Confidence 9999999863 21 233346778899999999999998863
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-16 Score=159.50 Aligned_cols=165 Identities=18% Similarity=0.178 Sum_probs=127.1
Q ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHHHhc
Q 012492 266 PILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGAC 345 (462)
Q Consensus 266 ~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~a 345 (462)
.++++|+++.|+..... .+.+..+++.+.+ .++++++.+|.+... +.+++ ...++.+.+|++. .++|+.|
T Consensus 223 ~~~~~v~vs~Gs~~~~~-~~~~~~~~~al~~-----~~~~~i~~~g~~~~~-~~~~~--~~~~v~~~~~~p~-~~ll~~~ 292 (392)
T TIGR01426 223 DGRPVVLISLGTVFNNQ-PSFYRTCVEAFRD-----LDWHVVLSVGRGVDP-ADLGE--LPPNVEVRQWVPQ-LEILKKA 292 (392)
T ss_pred CCCCEEEEecCccCCCC-HHHHHHHHHHHhc-----CCCeEEEEECCCCCh-hHhcc--CCCCeEEeCCCCH-HHHHhhC
Confidence 46778888888754322 2255555565543 245677777766321 22322 3578999999975 4899999
Q ss_pred chheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 012492 346 DCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDELKRMSENA 421 (462)
Q Consensus 346 D~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~~~~m~~~a 421 (462)
|++|+++|.+|++||+++|+|+|+.|...+| ..|+..+.+.|+|..+. +++++.++|.+++ +|++.++++.+.+
T Consensus 293 ~~~I~hgG~~t~~Eal~~G~P~v~~p~~~dq-~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l-~~~~~~~~~~~l~ 370 (392)
T TIGR01426 293 DAFITHGGMNSTMEALFNGVPMVAVPQGADQ-PMTARRIAELGLGRHLPPEEVTAEKLREAVLAVL-SDPRYAERLRKMR 370 (392)
T ss_pred CEEEECCCchHHHHHHHhCCCEEecCCcccH-HHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHh-cCHHHHHHHHHHH
Confidence 9999999999999999999999999987654 46999999999998765 3688999999999 7998888887777
Q ss_pred HhhcCCcHHHHHHHHHHHHHh
Q 012492 422 LKLAQPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 422 ~~~~~~~~~~~ia~~i~~l~~ 442 (462)
.+.....+.+++++.|++++.
T Consensus 371 ~~~~~~~~~~~aa~~i~~~~~ 391 (392)
T TIGR01426 371 AEIREAGGARRAADEIEGFLA 391 (392)
T ss_pred HHHHHcCCHHHHHHHHHHhhc
Confidence 777777788999999988764
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1e-16 Score=156.95 Aligned_cols=228 Identities=16% Similarity=0.140 Sum_probs=150.8
Q ss_pred CCeEEEEecCCCCCC---cccc-cCCCcEEEEcCHHHHHHHHHcCCC-CCcEEEcCCCCChhhhcccCChHHHHHHcCCC
Q 012492 191 KVIFVTVITDLNTCH---PTWF-HPRVNRCYCPSKEVAKRASYFGLE-VSQIRVFGLPIRPSFVRAVISKDNLRLELQMD 265 (462)
Q Consensus 191 ~iP~v~~~~d~~~~~---~~~~-~~~~d~~i~~s~~~~~~l~~~gi~-~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~ 265 (462)
++|+|...++..... ..++ .+.+|.++++|+.+++.+.+.|++ ++++.+++|+++.+.+.+. ..+
T Consensus 69 ~~~~v~e~~~~~~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f~~~-~~~--------- 138 (331)
T PHA01630 69 GKNIVFEVADTDAISHTALYFFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMFEYK-PKE--------- 138 (331)
T ss_pred CCceEEEEEeechhhHHHHHHHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHcCCC-ccc---------
Confidence 567665555432111 1234 567899999999999999888876 5689999999998766531 111
Q ss_pred CCCcEEEEEeCCCCC-ccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHHHh
Q 012492 266 PILPAVLLMGGGEGM-GPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGA 344 (462)
Q Consensus 266 ~~~~~iLv~gG~~~~-~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~ 344 (462)
.+.+.+++++|+... ++...+++++ +.+.+. .++++++++ |.+.. ...+. ++.. +......+++.++|+.
T Consensus 139 ~~~~~vl~~~g~~~~~Kg~d~Li~A~-~~l~~~---~~~~~lliv-G~~~~-~~~l~--~~~~-~~~~v~~~~l~~~y~~ 209 (331)
T PHA01630 139 KPHPCVLAILPHSWDRKGGDIVVKIF-HELQNE---GYDFYFLIK-SSNML-DPRLF--GLNG-VKTPLPDDDIYSLFAG 209 (331)
T ss_pred cCCCEEEEEeccccccCCHHHHHHHH-HHHHhh---CCCEEEEEE-eCccc-chhhc--cccc-eeccCCHHHHHHHHHh
Confidence 123556777777754 5555555544 555442 357776554 54421 11121 1111 1111123799999999
Q ss_pred cchheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHC--------------------CceeeeC-CHHHH
Q 012492 345 CDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDN--------------------GAGVFTR-SPKET 399 (462)
Q Consensus 345 aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~--------------------G~g~~~~-~~~~l 399 (462)
||++|.+|. |++++|||+||+|+|+++.++..+ .+.+. ++|++++ +.+++
T Consensus 210 aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E-----~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~ 284 (331)
T PHA01630 210 CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSE-----WVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDA 284 (331)
T ss_pred CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchh-----hccCCCceEEeeecccccccccCCcccccccCCCHHHH
Confidence 999998874 899999999999999999753221 12211 2355543 67788
Q ss_pred HHHHHHHhcCC---HHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 400 ARIVTEWFSTK---TDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 400 a~~i~~ll~~d---~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
++++.+++ .| ++.++.++++++...+.++++++++.+++++++
T Consensus 285 ~~~ii~~l-~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 285 YQKLLEAL-ANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred HHHHHHHH-hCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 88888888 44 466777777778888999999999999999865
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.5e-16 Score=154.51 Aligned_cols=237 Identities=14% Similarity=0.086 Sum_probs=152.2
Q ss_pred HHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCC----CCC-------c------------------c
Q 012492 157 EAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLN----TCH-------P------------------T 207 (462)
Q Consensus 157 ~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~----~~~-------~------------------~ 207 (462)
.+.++..++|+|+++++..... +.+. .++|.+.++|... ... . .
T Consensus 76 ~~~~~~~~~D~v~~~~~~~~~~---~~~~----~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (351)
T cd03804 76 IEQFDLSGYDLVISSSHAVAKG---VITR----PDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDR 148 (351)
T ss_pred HHhccccCCCEEEEcCcHHhcc---ccCC----CCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHH
Confidence 3456778999999887543321 1111 4678877766421 000 0 0
Q ss_pred cccCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHH
Q 012492 208 WFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETA 287 (462)
Q Consensus 208 ~~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l 287 (462)
+..+.+|.++++|+.+++.+.+.. + .+..+++||++.+.+.+. +...+.++.+|+....++...++
T Consensus 149 ~~~~~~d~ii~~S~~~~~~~~~~~-~-~~~~vi~~~~d~~~~~~~------------~~~~~~il~~G~~~~~K~~~~li 214 (351)
T cd03804 149 RSAARVDYFIANSRFVARRIKKYY-G-RDATVIYPPVDTDRFTPA------------EEKEDYYLSVGRLVPYKRIDLAI 214 (351)
T ss_pred HHhcCCCEEEECCHHHHHHHHHHh-C-CCcEEECCCCCHhhcCcC------------CCCCCEEEEEEcCccccChHHHH
Confidence 112678999999999999887642 2 245688888877654421 01234555555544455555555
Q ss_pred HHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccch--hHHHHHHhcchheecCC---hhhHHHHHH
Q 012492 288 MALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFET--QMEKWMGACDCIITKAG---PGTIAEALI 362 (462)
Q Consensus 288 ~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~--~~~~l~~~aD~vV~~sg---~~t~~EAla 362 (462)
+++ +.+ + ++++ ++|.+.. .+.+++ +..++|.|.|+++ ++.++|+.||+++.++. |.+++|||+
T Consensus 215 ~a~-~~~-------~-~~l~-ivG~g~~-~~~l~~-~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e~~g~~~~Eama 282 (351)
T cd03804 215 EAF-NKL-------G-KRLV-VIGDGPE-LDRLRA-KAGPNVTFLGRVSDEELRDLYARARAFLFPAEEDFGIVPVEAMA 282 (351)
T ss_pred HHH-HHC-------C-CcEE-EEECChh-HHHHHh-hcCCCEEEecCCCHHHHHHHHHhCCEEEECCcCCCCchHHHHHH
Confidence 544 333 2 4544 4566643 233333 4568999999984 59999999999998763 888999999
Q ss_pred hCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCH-HHHHHHHHHHHhhcCCcHHHHHHHH
Q 012492 363 RGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKT-DELKRMSENALKLAQPEAVVDIVKD 436 (462)
Q Consensus 363 ~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~-~~~~~m~~~a~~~~~~~~~~~ia~~ 436 (462)
+|+|+|+++.++.. +.+.+.+.|++++ ++++++++|.+++ +|+ ..+++++++++ .+++++..+.
T Consensus 283 ~G~Pvi~~~~~~~~-----e~i~~~~~G~~~~~~~~~~la~~i~~l~-~~~~~~~~~~~~~~~----~~~~~~~~~~ 349 (351)
T cd03804 283 SGTPVIAYGKGGAL-----ETVIDGVTGILFEEQTVESLAAAVERFE-KNEDFDPQAIRAHAE----RFSESRFREK 349 (351)
T ss_pred cCCCEEEeCCCCCc-----ceeeCCCCEEEeCCCCHHHHHHHHHHHH-hCcccCHHHHHHHHH----hcCHHHHHHH
Confidence 99999999864322 2344445677764 6889999999999 677 55566665554 4555555544
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-15 Score=150.40 Aligned_cols=268 Identities=12% Similarity=0.074 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHhhCCCEEEECCcccch-HHHHHHHHcCCCCCCeEEEEecCCCCC-C-----cccccCCCcEEEEcCHHH
Q 012492 151 YYAKEVEAGLMEYKPDIIISVHPLMQH-IPLWVLKWQGLQKKVIFVTVITDLNTC-H-----PTWFHPRVNRCYCPSKEV 223 (462)
Q Consensus 151 ~~~~~l~~~l~~~kPDvVi~~~~~~~~-~~~~~~~~~~~~~~iP~v~~~~d~~~~-~-----~~~~~~~~d~~i~~s~~~ 223 (462)
....++.+++++++||+|++.+..... ....++.. .+||++++.-...+. . +....+.++.++++++..
T Consensus 80 ~~~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~----~~IPv~HveaG~rs~~~~eE~~r~~i~~la~l~f~~t~~~ 155 (365)
T TIGR03568 80 LTIIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAAL----LNIPIAHIHGGEVTEGAIDESIRHAITKLSHLHFVATEEY 155 (365)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHH----hCCcEEEEECCccCCCCchHHHHHHHHHHHhhccCCCHHH
Confidence 345577889999999999999854332 22334443 489998665432211 0 122345567889999999
Q ss_pred HHHHHHcCCCCCcEEEcCCCCChhhhcc-cCChHHHHHHcCCCCCCcEEEEEeCCCC--CccHHHHHHHHHHhhhcccCC
Q 012492 224 AKRASYFGLEVSQIRVFGLPIRPSFVRA-VISKDNLRLELQMDPILPAVLLMGGGEG--MGPVKETAMALGESLLDKETG 300 (462)
Q Consensus 224 ~~~l~~~gi~~~~i~v~g~pv~~~~~~~-~~~~~~~r~~l~l~~~~~~iLv~gG~~~--~~~~~~~l~~l~~~l~~~~~~ 300 (462)
++.+.+.|.++++|.++||+..+.+... ...++.+.++++++++++++|++..... .....+.+..+.+.+.+.
T Consensus 156 ~~~L~~eg~~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~--- 232 (365)
T TIGR03568 156 RQRVIQMGEDPDRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL--- 232 (365)
T ss_pred HHHHHHcCCCCCcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---
Confidence 9999999999899999999987665432 1245677888998755567777765432 222223344455555431
Q ss_pred CCCceEEEEcc-CCH-HHHHHHhhccC-CCCeEEeccc--hhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCCC
Q 012492 301 RPIGQLIIICG-RNR-TLASTLQSEEW-KIPVKVRGFE--TQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPG 375 (462)
Q Consensus 301 ~~~~~~lvv~G-~~~-~l~~~~~~~~~-~~~V~~~g~~--~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~ 375 (462)
..++.++.-.+ ... .+.+.++++.. ..++.+.+.. .++..+|+.||++|+.|+++. .||.++|+|+|... .
T Consensus 233 ~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~vitdSSggi-~EA~~lg~Pvv~l~---~ 308 (365)
T TIGR03568 233 NKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADAVIGNSSSGI-IEAPSFGVPTINIG---T 308 (365)
T ss_pred ccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCEEEEcChhHH-HhhhhcCCCEEeec---C
Confidence 11232222112 222 24445554322 4679999865 689999999999999986554 89999999999764 2
Q ss_pred ccccchHHHHHCCce-eeeC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHH
Q 012492 376 QEKGNVPYVVDNGAG-VFTR-SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKD 436 (462)
Q Consensus 376 ~~~~n~~~l~~~G~g-~~~~-~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~ 436 (462)
.++ .++.|.. +.+. +++++.+++.+++ +++.++.|......+.+..++++|++.
T Consensus 309 R~e-----~~~~g~nvl~vg~~~~~I~~a~~~~~--~~~~~~~~~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 309 RQK-----GRLRADSVIDVDPDKEEIVKAIEKLL--DPAFKKSLKNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred Cch-----hhhhcCeEEEeCCCHHHHHHHHHHHh--ChHHHHHHhhCCCCCCCChHHHHHHHh
Confidence 222 3344544 4354 7999999999955 555555553322235566677777764
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.3e-15 Score=145.12 Aligned_cols=318 Identities=18% Similarity=0.191 Sum_probs=187.0
Q ss_pred EEEEecCCCchHHHHHHHHHHHHhhhcCCceEEE-EEec-cccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhH
Q 012492 65 VLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIF-VKDV-CKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHS 142 (462)
Q Consensus 65 Ili~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~-v~d~-~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 142 (462)
|+|+++.. +|....+. |+++|++++++. +++ ++.- ... .|. +..|+. ..+--+++.. .+..
T Consensus 1 I~i~AGE~-SGD~~ga~-Li~~Lk~~~p~~-~~~GvGG~~M~~-~G~-----~~l~d~----~~lsvmG~~E----vl~~ 63 (373)
T PF02684_consen 1 IFISAGEA-SGDLHGAR-LIRALKARDPDI-EFYGVGGPRMQA-AGV-----ESLFDM----EELSVMGFVE----VLKK 63 (373)
T ss_pred CEEEeeCc-cHHHHHHH-HHHHHHhhCCCc-EEEEEechHHHh-CCC-----ceecch----HHhhhccHHH----HHHH
Confidence 57778888 89998875 999999998754 333 2211 111 111 111100 0000011110 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCEEEE-CCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCccccc---------CC
Q 012492 143 CYLAAMAAYYAKEVEAGLMEYKPDIIIS-VHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFH---------PR 212 (462)
Q Consensus 143 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~-~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~---------~~ 212 (462)
.+ .-....+++.+.+++.+||++|. ++|-.+.-....+|..+ .++|+|.++.-. -|.+ +.
T Consensus 64 l~---~~~~~~~~~~~~~~~~~pd~vIlID~pgFNlrlak~lk~~~--~~~~viyYI~Pq-----vWAWr~~R~~~i~~~ 133 (373)
T PF02684_consen 64 LP---KLKRLFRKLVERIKEEKPDVVILIDYPGFNLRLAKKLKKRG--IPIKVIYYISPQ-----VWAWRPGRAKKIKKY 133 (373)
T ss_pred HH---HHHHHHHHHHHHHHHcCCCEEEEeCCCCccHHHHHHHHHhC--CCceEEEEECCc-----eeeeCccHHHHHHHH
Confidence 11 11344567788899999998874 44554443223333332 345588776522 2333 34
Q ss_pred CcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHH---HHH
Q 012492 213 VNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKET---AMA 289 (462)
Q Consensus 213 ~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~---l~~ 289 (462)
+|.++|..+-..+.+.++|+ ++.++|+|+-+..... .++...++.+ +++++++|.+..||...+ +..+ +.+
T Consensus 134 ~D~ll~ifPFE~~~y~~~g~---~~~~VGHPl~d~~~~~-~~~~~~~~~~-l~~~~~iIaLLPGSR~~E-I~rllP~~l~ 207 (373)
T PF02684_consen 134 VDHLLVIFPFEPEFYKKHGV---PVTYVGHPLLDEVKPE-PDRAEAREKL-LDPDKPIIALLPGSRKSE-IKRLLPIFLE 207 (373)
T ss_pred HhheeECCcccHHHHhccCC---CeEEECCcchhhhccC-CCHHHHHHhc-CCCCCcEEEEeCCCCHHH-HHHHHHHHHH
Confidence 68899888888888888886 4889999987765443 3456667777 888999999999887643 3333 223
Q ss_pred HHHhhhcccCCCCCceEEEEccCCHH---HHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCC
Q 012492 290 LGESLLDKETGRPIGQLIIICGRNRT---LASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLP 366 (462)
Q Consensus 290 l~~~l~~~~~~~~~~~~lvv~G~~~~---l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~P 366 (462)
.++.+.+ ++|+.++++.+-+... +.+.+.... .++.+.-...+-.+.|+.||+.+..||. +++|++.+|+|
T Consensus 208 aa~~l~~---~~p~l~fvvp~a~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~m~~ad~al~~SGT-aTLE~Al~g~P 281 (373)
T PF02684_consen 208 AAKLLKK---QRPDLQFVVPVAPEVHEELIEEILAEYP--PDVSIVIIEGESYDAMAAADAALAASGT-ATLEAALLGVP 281 (373)
T ss_pred HHHHHHH---hCCCeEEEEecCCHHHHHHHHHHHHhhC--CCCeEEEcCCchHHHHHhCcchhhcCCH-HHHHHHHhCCC
Confidence 3345554 3688888776655432 122222222 2333332235678999999999999985 55999999999
Q ss_pred EEEecCCCCccccchHHHHHCCceee---------eC-------CHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 012492 367 IILNDYIPGQEKGNVPYVVDNGAGVF---------TR-------SPKETARIVTEWFSTKTDELKRMSENAL 422 (462)
Q Consensus 367 vI~~~~~~~~~~~n~~~l~~~G~g~~---------~~-------~~~~la~~i~~ll~~d~~~~~~m~~~a~ 422 (462)
+|+......-...-++.+++....-+ ++ +++.+++++.+++ .|++.++......+
T Consensus 282 ~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll-~~~~~~~~~~~~~~ 352 (373)
T PF02684_consen 282 MVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELL-ENPEKRKKQKELFR 352 (373)
T ss_pred EEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHh-cCHHHHHHHHHHHH
Confidence 99987643211112333433222111 11 4888999999999 67766555444433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.9e-15 Score=136.25 Aligned_cols=305 Identities=16% Similarity=0.139 Sum_probs=172.5
Q ss_pred CeEEEEec---CCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcch
Q 012492 63 KNVLILMS---DTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKW 139 (462)
Q Consensus 63 ~kIli~~~---~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 139 (462)
|||+|.+- ..|+||..+.+.||++|+++|. ..++++. .....+ .+ +.|... ..
T Consensus 1 M~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~~--~~~fl~k-------~~~e~~--~~-------~~~~~f-~~----- 56 (318)
T COG3980 1 MKVLIRCDGGLEIGMGHVMRTLTLARELEKRGF--ACLFLTK-------QDIEAI--IH-------KVYEGF-KV----- 56 (318)
T ss_pred CcEEEEecCCcccCcchhhhHHHHHHHHHhcCc--eEEEecc-------cchhhh--hh-------hhhhhc-cc-----
Confidence 79999983 3899999999999999999962 2333331 111110 01 112110 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccccCCCcEEEEc
Q 012492 140 IHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCP 219 (462)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~~~~d~~i~~ 219 (462)
...+ ....+++.|+|++|.++...+.--....+. ..+.|.+.+ .|.+..+ + ...|.+ .
T Consensus 57 -----------~~~~-~~n~ik~~k~d~lI~Dsygl~~dd~k~ik~---e~~~k~l~f-Dd~~~~~---~-~d~d~i--v 114 (318)
T COG3980 57 -----------LEGR-GNNLIKEEKFDLLIFDSYGLNADDFKLIKE---EAGSKILIF-DDENAKS---F-KDNDLI--V 114 (318)
T ss_pred -----------eeee-cccccccccCCEEEEeccCCCHHHHHHHHH---HhCCcEEEe-cCCCccc---h-hhhHhh--h
Confidence 0000 012588999999999986544321112221 125676543 3332111 1 122322 2
Q ss_pred CHHHHHHHHHcCCCCCcE-EEcCC---CCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhh
Q 012492 220 SKEVAKRASYFGLEVSQI-RVFGL---PIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLL 295 (462)
Q Consensus 220 s~~~~~~l~~~gi~~~~i-~v~g~---pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~ 295 (462)
+.... ....+|.-+.+. ...|. |++++|.. .+++...+ +..-||++.|+...+.+ ...++..|.
T Consensus 115 N~~~~-a~~~y~~v~~k~~~~lGp~y~~lr~eF~~---~r~~~~~r-----~~r~ilI~lGGsDpk~l---t~kvl~~L~ 182 (318)
T COG3980 115 NAILN-ANDYYGLVPNKTRYYLGPGYAPLRPEFYA---LREENTER-----PKRDILITLGGSDPKNL---TLKVLAELE 182 (318)
T ss_pred hhhhc-chhhccccCcceEEEecCCceeccHHHHH---hHHHHhhc-----chheEEEEccCCChhhh---HHHHHHHhh
Confidence 22222 222234333343 44443 78888875 34443332 23335665444343322 222333443
Q ss_pred cccCCCCCceEEEEccCCH-HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCC
Q 012492 296 DKETGRPIGQLIIICGRNR-TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIP 374 (462)
Q Consensus 296 ~~~~~~~~~~~lvv~G~~~-~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~ 374 (462)
++ ++.+-++.|... .+....+......++.+.-..+||+++|..||+.|+. +|+|+.||+..|+|.++.+...
T Consensus 183 ~~-----~~nl~iV~gs~~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~aI~A-aGstlyEa~~lgvP~l~l~~a~ 256 (318)
T COG3980 183 QK-----NVNLHIVVGSSNPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADLAISA-AGSTLYEALLLGVPSLVLPLAE 256 (318)
T ss_pred cc-----CeeEEEEecCCCcchhHHHHHHhhCCCeeeEecchhHHHHHHhcchheec-cchHHHHHHHhcCCceEEeeec
Confidence 31 234445556432 2333333334567899988889999999999999995 5589999999999988888755
Q ss_pred CccccchHHHHHCCceeee---CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHH
Q 012492 375 GQEKGNVPYVVDNGAGVFT---RSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDI 433 (462)
Q Consensus 375 ~~~~~n~~~l~~~G~g~~~---~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~i 433 (462)
+| ...+.++...|...-. -.+......+.++. +|+..|+.+....+...+.....+|
T Consensus 257 NQ-~~~a~~f~~lg~~~~l~~~l~~~~~~~~~~~i~-~d~~~rk~l~~~~~~i~dg~g~~rI 316 (318)
T COG3980 257 NQ-IATAKEFEALGIIKQLGYHLKDLAKDYEILQIQ-KDYARRKNLSFGSKLIGDGRGFLRI 316 (318)
T ss_pred cH-HHHHHHHHhcCchhhccCCCchHHHHHHHHHhh-hCHHHhhhhhhccceeeccccceec
Confidence 54 4477888887764333 23344455677777 7999998888777666665555444
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-15 Score=149.38 Aligned_cols=269 Identities=13% Similarity=0.120 Sum_probs=157.6
Q ss_pred HHHHHHHHHHhhCCCEEEECCcccchHHH-HHHHHcCCCCCCeEEEEecCCCC---CCc-------ccccCCCcEEEEcC
Q 012492 152 YAKEVEAGLMEYKPDIIISVHPLMQHIPL-WVLKWQGLQKKVIFVTVITDLNT---CHP-------TWFHPRVNRCYCPS 220 (462)
Q Consensus 152 ~~~~l~~~l~~~kPDvVi~~~~~~~~~~~-~~~~~~~~~~~iP~v~~~~d~~~---~~~-------~~~~~~~d~~i~~s 220 (462)
....+.+++.+++||+|++.+......+. .++.. .+||++.+...... .++ ....+.++..++++
T Consensus 55 ~~~~~~~~~~~~~Pd~Vlv~GD~~~~la~alaA~~----~~ipv~HieaGlRs~d~~~g~~de~~R~~i~~la~lhf~~t 130 (346)
T PF02350_consen 55 AIIELADVLEREKPDAVLVLGDRNEALAAALAAFY----LNIPVAHIEAGLRSGDRTEGMPDEINRHAIDKLAHLHFAPT 130 (346)
T ss_dssp HHHHHHHHHHHHT-SEEEEETTSHHHHHHHHHHHH----TT-EEEEES-----S-TTSSTTHHHHHHHHHHH-SEEEESS
T ss_pred HHHHHHHHHHhcCCCEEEEEcCCchHHHHHHHHHH----hCCCEEEecCCCCccccCCCCchhhhhhhhhhhhhhhccCC
Confidence 44567788999999999998866544332 33333 59998776543211 111 12345678999999
Q ss_pred HHHHHHHHHcCCCCCcEEEcCCCCChhhhcc-cCChHHH-HHHcCCCCCCcEEEEEeCCCCCcc---HHHHHHHHHHhhh
Q 012492 221 KEVAKRASYFGLEVSQIRVFGLPIRPSFVRA-VISKDNL-RLELQMDPILPAVLLMGGGEGMGP---VKETAMALGESLL 295 (462)
Q Consensus 221 ~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~-~~~~~~~-r~~l~l~~~~~~iLv~gG~~~~~~---~~~~l~~l~~~l~ 295 (462)
+..++.+.+.|+++++|.++|+|.-+.+... +...+.. ...+..+..++++|++........ ..+.+..+++.|.
T Consensus 131 ~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~ 210 (346)
T PF02350_consen 131 EEARERLLQEGEPPERIFVVGNPGIDALLQNKEEIEEKYKNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALA 210 (346)
T ss_dssp HHHHHHHHHTT--GGGEEE---HHHHHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCeEEEEChHHHHHHHHhHHHHhhhhhhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHH
Confidence 9999999999999999999999876655332 1111111 111100245678889886655432 1223333445554
Q ss_pred cccCCCCCceEEEEccCCHHHH----HHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCChhhHHHHHHhCCCEEE
Q 012492 296 DKETGRPIGQLIIICGRNRTLA----STLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAGPGTIAEALIRGLPIIL 369 (462)
Q Consensus 296 ~~~~~~~~~~~lvv~G~~~~l~----~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~ 369 (462)
+. +++++++.....+... +.++++ .++.++... .++..+|+.|+++|+.|| +..-||.++|+|+|.
T Consensus 211 ~~----~~~~vi~~~hn~p~~~~~i~~~l~~~---~~v~~~~~l~~~~~l~ll~~a~~vvgdSs-GI~eEa~~lg~P~v~ 282 (346)
T PF02350_consen 211 ER----QNVPVIFPLHNNPRGSDIIIEKLKKY---DNVRLIEPLGYEEYLSLLKNADLVVGDSS-GIQEEAPSLGKPVVN 282 (346)
T ss_dssp HH----TTEEEEEE--S-HHHHHHHHHHHTT----TTEEEE----HHHHHHHHHHESEEEESSH-HHHHHGGGGT--EEE
T ss_pred hc----CCCcEEEEecCCchHHHHHHHHhccc---CCEEEECCCCHHHHHHHHhcceEEEEcCc-cHHHHHHHhCCeEEE
Confidence 41 3577787777655433 334433 489888765 588899999999999998 444499999999999
Q ss_pred ecCCCCccccchHHHHHCCceeeeC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHH
Q 012492 370 NDYIPGQEKGNVPYVVDNGAGVFTR-SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIH 438 (462)
Q Consensus 370 ~~~~~~~~~~n~~~l~~~G~g~~~~-~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~ 438 (462)
....+..| .....|..+++. +++++.+++.+++ ++++.+.++.....-+.+..++++|++.++
T Consensus 283 iR~~geRq-----e~r~~~~nvlv~~~~~~I~~ai~~~l-~~~~~~~~~~~~~npYgdG~as~rI~~~Lk 346 (346)
T PF02350_consen 283 IRDSGERQ-----EGRERGSNVLVGTDPEAIIQAIEKAL-SDKDFYRKLKNRPNPYGDGNASERIVEILK 346 (346)
T ss_dssp CSSS-S-H-----HHHHTTSEEEETSSHHHHHHHHHHHH-H-HHHHHHHHCS--TT-SS-HHHHHHHHHH
T ss_pred ecCCCCCH-----HHHhhcceEEeCCCHHHHHHHHHHHH-hChHHHHhhccCCCCCCCCcHHHHHHHhhC
Confidence 85544333 356667666664 7999999999999 566666666543445667788888888764
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.2e-14 Score=134.99 Aligned_cols=327 Identities=14% Similarity=0.099 Sum_probs=187.9
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhH
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHS 142 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 142 (462)
|||+|-.... -|..-...++++|+++|| +|.++.- . ........ ..++..+....... .+
T Consensus 1 MkIwiDi~~p--~hvhfFk~~I~eL~~~Gh---eV~it~R-----~--~~~~~~LL-------~~yg~~y~~iG~~g-~~ 60 (335)
T PF04007_consen 1 MKIWIDITHP--AHVHFFKNIIRELEKRGH---EVLITAR-----D--KDETEELL-------DLYGIDYIVIGKHG-DS 60 (335)
T ss_pred CeEEEECCCc--hHHHHHHHHHHHHHhCCC---EEEEEEe-----c--cchHHHHH-------HHcCCCeEEEcCCC-CC
Confidence 7999988877 699999999999999986 5555421 1 01111111 11222111110000 11
Q ss_pred HHHH-HHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecC-CCCCCcccccCCCcEEEEcC
Q 012492 143 CYLA-AMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITD-LNTCHPTWFHPRVNRCYCPS 220 (462)
Q Consensus 143 ~~~~-~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d-~~~~~~~~~~~~~d~~i~~s 220 (462)
.... ........++.+++++++||++++.+...+. .+++. .++|+|.+..+ ......+...+.+|.+++|.
T Consensus 61 ~~~Kl~~~~~R~~~l~~~~~~~~pDv~is~~s~~a~---~va~~----lgiP~I~f~D~e~a~~~~~Lt~Pla~~i~~P~ 133 (335)
T PF04007_consen 61 LYGKLLESIERQYKLLKLIKKFKPDVAISFGSPEAA---RVAFG----LGIPSIVFNDTEHAIAQNRLTLPLADVIITPE 133 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEecCcHHHH---HHHHH----hCCCeEEEecCchhhccceeehhcCCeeECCc
Confidence 1111 1123345577888999999999988765432 23332 48999976643 22122344567889999887
Q ss_pred HHHHHHHHHcCCCCCcEE-EcCCCCChhhh-cccCChHHHHHHcCCCCCCcEEEEEeCCCCC---ccHHHHHHHHHHhhh
Q 012492 221 KEVAKRASYFGLEVSQIR-VFGLPIRPSFV-RAVISKDNLRLELQMDPILPAVLLMGGGEGM---GPVKETAMALGESLL 295 (462)
Q Consensus 221 ~~~~~~l~~~gi~~~~i~-v~g~pv~~~~~-~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~---~~~~~~l~~l~~~l~ 295 (462)
.-....+.+.|.. ++|. +-| +.+..+ .+-...+++.+++|+++ .++|++-.-...+ .+...++..+++.|.
T Consensus 134 ~~~~~~~~~~G~~-~~i~~y~G--~~E~ayl~~F~Pd~~vl~~lg~~~-~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~ 209 (335)
T PF04007_consen 134 AIPKEFLKRFGAK-NQIRTYNG--YKELAYLHPFKPDPEVLKELGLDD-EPYIVVRPEAWKASYDNGKKSILPEIIEELE 209 (335)
T ss_pred ccCHHHHHhcCCc-CCEEEECC--eeeEEeecCCCCChhHHHHcCCCC-CCEEEEEeccccCeeecCccchHHHHHHHHH
Confidence 6555556666765 5666 333 222111 11012346778899874 5777775444332 112233445556665
Q ss_pred cccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCCC
Q 012492 296 DKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPG 375 (462)
Q Consensus 296 ~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~ 375 (462)
+. .+ . +++..+.....+..+.+ ++.+....-+...++..||++|+.+| .+..||+.+|+|+|.+...
T Consensus 210 ~~----~~-~-vV~ipr~~~~~~~~~~~----~~~i~~~~vd~~~Ll~~a~l~Ig~gg-TMa~EAA~LGtPaIs~~~g-- 276 (335)
T PF04007_consen 210 KY----GR-N-VVIIPRYEDQRELFEKY----GVIIPPEPVDGLDLLYYADLVIGGGG-TMAREAALLGTPAISCFPG-- 276 (335)
T ss_pred hh----Cc-e-EEEecCCcchhhHHhcc----CccccCCCCCHHHHHHhcCEEEeCCc-HHHHHHHHhCCCEEEecCC--
Confidence 42 22 2 34444443333334432 24444333356689999999999655 5679999999999987432
Q ss_pred ccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Q 012492 376 QEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLA 441 (462)
Q Consensus 376 ~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~ 441 (462)
.....-+++.+.|.-+.+.+++++.+.+.+.+. .+ ++.+.....+..+.|.+.|++++
T Consensus 277 ~~~~vd~~L~~~Gll~~~~~~~ei~~~v~~~~~----~~----~~~~~~~~~d~~~~i~~~i~~~~ 334 (335)
T PF04007_consen 277 KLLAVDKYLIEKGLLYHSTDPDEIVEYVRKNLG----KR----KKIREKKSEDPTDLIIEEIEEYI 334 (335)
T ss_pred cchhHHHHHHHCCCeEecCCHHHHHHHHHHhhh----cc----cchhhhhccCHHHHHHHHHHHhh
Confidence 112234688999998888999988886655441 11 11222223667778888888765
|
They are found in archaea and some bacteria and have no known function. |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.4e-15 Score=137.57 Aligned_cols=348 Identities=17% Similarity=0.201 Sum_probs=197.4
Q ss_pred CCCCCeEEEEecC-CCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchh-hHHHHHHHHhhhHHHHH--Hhhc
Q 012492 59 AERTKNVLILMSD-TGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLND-MERSYKFMVKHVQLWKV--AFHS 134 (462)
Q Consensus 59 ~~~~~kIli~~~~-~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~-~~~~y~~~~~~~~l~~~--~~~~ 134 (462)
...++||+|.+.. .|-||.+++..||++|.+... +.++.+++..+...+++... ++ | ++.+.++.. ++..
T Consensus 6 ~~~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~-~~~Il~IsG~~~~~~F~~~~gVd--~---V~LPsl~k~~~G~~~ 79 (400)
T COG4671 6 ASKRPRILFYSHDLLGLGHLRRALRIAHALVEDYL-GFDILIISGGPPAGGFPGPAGVD--F---VKLPSLIKGDNGEYG 79 (400)
T ss_pred hhccceEEEEehhhccchHHHHHHHHHHHHhhccc-CceEEEEeCCCccCCCCCcccCc--e---EecCceEecCCCcee
Confidence 3456799999976 689999999999999998843 35677765444333333211 10 0 111111110 0100
Q ss_pred C-Cc-chhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECC-cccch----HHHHHHHHcCCCCCCeEEEEecCCCC----
Q 012492 135 T-SP-KWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVH-PLMQH----IPLWVLKWQGLQKKVIFVTVITDLNT---- 203 (462)
Q Consensus 135 ~-~~-~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~-~~~~~----~~~~~~~~~~~~~~iP~v~~~~d~~~---- 203 (462)
. +. ...... ..+...-|....+.+|||++|++. |+... ..+-..+.. +-+.|...+|.-.
T Consensus 80 ~~d~~~~l~e~-----~~~Rs~lil~t~~~fkPDi~IVd~~P~Glr~EL~ptL~yl~~~----~t~~vL~lr~i~D~p~~ 150 (400)
T COG4671 80 LVDLDGDLEET-----KKLRSQLILSTAETFKPDIFIVDKFPFGLRFELLPTLEYLKTT----GTRLVLGLRSIRDIPQE 150 (400)
T ss_pred eeecCCCHHHH-----HHHHHHHHHHHHHhcCCCEEEEeccccchhhhhhHHHHHHhhc----CCcceeehHhhhhchhh
Confidence 0 00 011111 122334566789999999998877 33211 112223322 3344434443321
Q ss_pred CCccc--------ccCCCcEEEEc-CHHHHHHHHHcCCCC---CcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEE
Q 012492 204 CHPTW--------FHPRVNRCYCP-SKEVAKRASYFGLEV---SQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAV 271 (462)
Q Consensus 204 ~~~~~--------~~~~~d~~i~~-s~~~~~~l~~~gi~~---~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~i 271 (462)
....| +.+..|.+++- .+...+-...+.+++ .++.++|.- .......+... ...+++..|
T Consensus 151 ~~~~w~~~~~~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~v-q~~~~~~~~p~-------~~~pE~~~I 222 (400)
T COG4671 151 LEADWRRAETVRLINRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFV-QRSLPHLPLPP-------HEAPEGFDI 222 (400)
T ss_pred hccchhhhHHHHHHHHhheEEEEecCccccChhhcCCccHhhhhheeEeEEe-eccCcCCCCCC-------cCCCccceE
Confidence 01122 23455777653 333333333344432 577788754 21111110000 011344567
Q ss_pred EEEeCCCCC-ccHHHHHHHHHHhhhcccCCCCCce--EEEEccCCH--HHHHHHhhc-cCCCCeEEeccchhHHHHHHhc
Q 012492 272 LLMGGGEGM-GPVKETAMALGESLLDKETGRPIGQ--LIIICGRNR--TLASTLQSE-EWKIPVKVRGFETQMEKWMGAC 345 (462)
Q Consensus 272 Lv~gG~~~~-~~~~~~l~~l~~~l~~~~~~~~~~~--~lvv~G~~~--~l~~~~~~~-~~~~~V~~~g~~~~~~~l~~~a 345 (462)
||+.|+-+. ..+.+.+.++...++ +++ .+++.|+.. ..++++... ....+|+++.|.+++..||+.|
T Consensus 223 lvs~GGG~dG~eLi~~~l~A~~~l~-------~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA 295 (400)
T COG4671 223 LVSVGGGADGAELIETALAAAQLLA-------GLNHKWLIVTGPFMPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGA 295 (400)
T ss_pred EEecCCChhhHHHHHHHHHHhhhCC-------CCCcceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhh
Confidence 776443221 122222223333332 333 577889874 345555443 4457899999999999999999
Q ss_pred chheecCChhhHHHHHHhCCCEEEecCCC--CccccchHHHHHCCce-eeeC---CHHHHHHHHHHHhcCCHHHHHHHHH
Q 012492 346 DCIITKAGPGTIAEALIRGLPIILNDYIP--GQEKGNVPYVVDNGAG-VFTR---SPKETARIVTEWFSTKTDELKRMSE 419 (462)
Q Consensus 346 D~vV~~sg~~t~~EAla~G~PvI~~~~~~--~~~~~n~~~l~~~G~g-~~~~---~~~~la~~i~~ll~~d~~~~~~m~~ 419 (462)
+.+|+.+|.+|++|-+++|+|.++.|... .+|...++.+.+.|.. ++.+ +++.+++++...+ +.|.-
T Consensus 296 ~~vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l-~~P~~------ 368 (400)
T COG4671 296 RLVVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAAL-ARPSP------ 368 (400)
T ss_pred heeeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcc-cCCCC------
Confidence 99999999999999999999999999864 3556678888899974 4444 3778888888877 32311
Q ss_pred HHHhhcCCcHHHHHHHHHHHHHhcc
Q 012492 420 NALKLAQPEAVVDIVKDIHDLAAQR 444 (462)
Q Consensus 420 ~a~~~~~~~~~~~ia~~i~~l~~~~ 444 (462)
....-+-.+.+++++.+.+++...
T Consensus 369 -~~~~L~L~G~~~~a~~l~e~L~~~ 392 (400)
T COG4671 369 -SKPHLDLEGLEHIARILAELLSTR 392 (400)
T ss_pred -CccccCchhhHhHHHHHHHHhhhh
Confidence 123334567888888887777544
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.1e-14 Score=138.22 Aligned_cols=311 Identities=12% Similarity=0.069 Sum_probs=171.5
Q ss_pred CCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhh
Q 012492 62 TKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIH 141 (462)
Q Consensus 62 ~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 141 (462)
||||+|.++.. +|....+. |+++|++ + .+++-. +|-.. .+..|+. ..+--+++.. .+.
T Consensus 1 ~~~i~i~aGE~-SGD~~ga~-l~~~l~~-~---~~~~G~------GG~~m--~~~~~~~----~~lsv~G~~e----vl~ 58 (347)
T PRK14089 1 MMKILVSALEP-SANLHLKE-LLKNLPK-D---YELIGI------FDKSL--GNPLYDS----REFSIMGFVD----VLP 58 (347)
T ss_pred CcEEEEEeccc-cHHHHHHH-HHHHHhc-C---CEEEEE------echHH--HHhcCCh----HHhhhhhHHH----HHH
Confidence 68999999999 89988875 8888987 2 343321 12100 1111100 0000011110 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEE-CCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCccccc---------C
Q 012492 142 SCYLAAMAAYYAKEVEAGLMEYKPDIIIS-VHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFH---------P 211 (462)
Q Consensus 142 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~-~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~---------~ 211 (462)
..+. -....+++.+.+ .+||++|. ++|-.+.-....+|..+ .++|++.|+.-. -|.+ +
T Consensus 59 ~~~~---~~~~~~~~~~~~--~~pd~~i~iD~p~Fnl~lak~~k~~~--~~i~viyyi~Pq-----vWAWr~~R~~~i~k 126 (347)
T PRK14089 59 KLFF---AKKAIKEMVELA--KQADKVLLMDSSSFNIPLAKKIKKAY--PKKEIIYYILPQ-----VWAWKKGRAKILEK 126 (347)
T ss_pred HHHH---HHHHHHHHHHHh--cCCCEEEEeCCCCCCHHHHHHHHhcC--CCCCEEEEECcc-----ceeeCcchHHHHHH
Confidence 1111 112333444443 69999875 44554442222233321 379999887532 2332 3
Q ss_pred CCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHH---
Q 012492 212 RVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAM--- 288 (462)
Q Consensus 212 ~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~--- 288 (462)
.+|++++..+-..+.+ |+ ++.++|+|+.+.+.. .+. . ++ +.++|++++||.+.+-. .++.
T Consensus 127 ~~d~vl~ifPFE~~~y---g~---~~~~VGhPl~d~~~~---~~~----~--~~-~~~~I~llPGSR~~Ei~-~llP~~~ 189 (347)
T PRK14089 127 YCDFLASILPFEVQFY---QS---KATYVGHPLLDEIKE---FKK----D--LD-KEGTIAFMPGSRKSEIK-RLMPIFK 189 (347)
T ss_pred HHhhhhccCCCCHHHh---CC---CCEEECCcHHHhhhh---hhh----h--cC-CCCEEEEECCCCHHHHH-HHHHHHH
Confidence 4677777554333333 44 467999998765431 111 1 23 33789999999986532 4444
Q ss_pred HHHHhhhcccCCCCCceEEEEccCCH--HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCC
Q 012492 289 ALGESLLDKETGRPIGQLIIICGRNR--TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLP 366 (462)
Q Consensus 289 ~l~~~l~~~~~~~~~~~~lvv~G~~~--~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~P 366 (462)
++++.+.++ ..++ ++.+... .+.+.+.+. ..+.+. +++.++|++||++++.||..|+ |++.+|+|
T Consensus 190 ~aa~~L~~~-----~~~~-~i~~a~~~~~i~~~~~~~---~~~~~~---~~~~~~m~~aDlal~~SGT~TL-E~al~g~P 256 (347)
T PRK14089 190 ELAKKLEGK-----EKIL-VVPSFFKGKDLKEIYGDI---SEFEIS---YDTHKALLEAEFAFICSGTATL-EAALIGTP 256 (347)
T ss_pred HHHHHHhhc-----CcEE-EEeCCCcHHHHHHHHhcC---CCcEEe---ccHHHHHHhhhHHHhcCcHHHH-HHHHhCCC
Confidence 444555431 1333 4445442 223333221 244444 4778999999999999998886 99999999
Q ss_pred EEEecCCCCccccchHHHHH---CCceeee-C----------------CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcC
Q 012492 367 IILNDYIPGQEKGNVPYVVD---NGAGVFT-R----------------SPKETARIVTEWFSTKTDELKRMSENALKLAQ 426 (462)
Q Consensus 367 vI~~~~~~~~~~~n~~~l~~---~G~g~~~-~----------------~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~ 426 (462)
+|+.......+..|++.++. .|..-++ + +++.+++.+.+ . +.+...++.+..++...
T Consensus 257 ~Vv~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i~~-~--~~~~~~~~~~~l~~~l~ 333 (347)
T PRK14089 257 FVLAYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKAYKE-M--DREKFFKKSKELREYLK 333 (347)
T ss_pred EEEEEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHHHHH-H--HHHHHHHHHHHHHHHhc
Confidence 99966555556667877773 2322111 1 25566666655 2 22333444444555545
Q ss_pred CcHHHHHHHHHHH
Q 012492 427 PEAVVDIVKDIHD 439 (462)
Q Consensus 427 ~~~~~~ia~~i~~ 439 (462)
+.+++++++.+.+
T Consensus 334 ~~a~~~~A~~i~~ 346 (347)
T PRK14089 334 HGSAKNVAKILKE 346 (347)
T ss_pred CCHHHHHHHHHhc
Confidence 6788888888765
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.8e-13 Score=137.33 Aligned_cols=321 Identities=15% Similarity=0.228 Sum_probs=185.9
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEE-EEec-cccccCC-CchhhHHHHHHHHhhhHHHHHHhhcCCcch
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIF-VKDV-CKEYAGW-PLNDMERSYKFMVKHVQLWKVAFHSTSPKW 139 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~-v~d~-~~~~~~~-~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 139 (462)
.||+|.++.. +|....+. |+++|+++.|+ .+++ ++.- ... .|. ..-.++. + .. +++.. .
T Consensus 227 ~kIfI~AGE~-SGDlhgA~-Li~aLk~~~P~-i~~~GvGG~~M~a-aG~e~l~d~~e-L-------sV--mG~~E----V 288 (608)
T PRK01021 227 TSCFISAGEH-SGDTLGGN-LLKEIKALYPD-IHCFGVGGPQMRA-EGFHPLFNMEE-F-------QV--SGFWE----V 288 (608)
T ss_pred CeEEEEeccc-cHHHHHHH-HHHHHHhcCCC-cEEEEEccHHHHh-CcCcccCChHH-h-------hh--hhHHH----H
Confidence 5999999999 89998875 89999999874 3333 2210 111 111 0001111 0 00 11110 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCCCEEEE-CCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCccccc--------
Q 012492 140 IHSCYLAAMAAYYAKEVEAGLMEYKPDIIIS-VHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFH-------- 210 (462)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~-~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~-------- 210 (462)
++..+ .-....+++.+.+++.+||++|. |.|-.+.-....+|..| .++|+|.++.-. -|.+
T Consensus 289 L~~l~---~l~~~~~~l~~~i~~~kPD~vIlID~PgFNlrLAK~lkk~G--i~ipviyYVsPq-----VWAWR~~Rikki 358 (608)
T PRK01021 289 LLALF---KLWYRYRKLYKTILKTNPRTVICIDFPDFHFLLIKKLRKRG--YKGKIVHYVCPS-----IWAWRPKRKTIL 358 (608)
T ss_pred HHHHH---HHHHHHHHHHHHHHhcCCCEEEEeCCCCCCHHHHHHHHhcC--CCCCEEEEECcc-----ceeeCcchHHHH
Confidence 11111 12344567888999999999886 55555543222333321 135999877532 2332
Q ss_pred -CCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHH
Q 012492 211 -PRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMA 289 (462)
Q Consensus 211 -~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~ 289 (462)
+.+|+++|..+-..+.+.++|++ +.++|+|+-+.... ..++++.+++++++++.+++.+..||...+ +..++..
T Consensus 359 ~k~vD~ll~IfPFE~~~y~~~gv~---v~yVGHPL~d~i~~-~~~~~~~r~~lgl~~~~~iIaLLPGSR~~E-I~rllPv 433 (608)
T PRK01021 359 EKYLDLLLLILPFEQNLFKDSPLR---TVYLGHPLVETISS-FSPNLSWKEQLHLPSDKPIVAAFPGSRRGD-ILRNLTI 433 (608)
T ss_pred HHHhhhheecCccCHHHHHhcCCC---eEEECCcHHhhccc-CCCHHHHHHHcCCCCCCCEEEEECCCCHHH-HHHHHHH
Confidence 34688888888888888888874 88999999766432 246677899999988889898998887643 4444433
Q ss_pred HHHhhh--cccCCCCCceEEEEccCCHHHHHHHhhc--cCC-CCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhC
Q 012492 290 LGESLL--DKETGRPIGQLIIICGRNRTLASTLQSE--EWK-IPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRG 364 (462)
Q Consensus 290 l~~~l~--~~~~~~~~~~~lvv~G~~~~l~~~~~~~--~~~-~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G 364 (462)
+.+... .. .++.++++...+.. ..+.+++. +.. .++++..- ++-.++|++||+.++.||. +++|++.+|
T Consensus 434 ~l~aa~~~~l---~~~l~fvvp~a~~~-~~~~i~~~~~~~~~~~~~ii~~-~~~~~~m~aaD~aLaaSGT-aTLEaAL~g 507 (608)
T PRK01021 434 QVQAFLASSL---ASTHQLLVSSANPK-YDHLILEVLQQEGCLHSHIVPS-QFRYELMRECDCALAKCGT-IVLETALNQ 507 (608)
T ss_pred HHHHHHHHHh---ccCeEEEEecCchh-hHHHHHHHHhhcCCCCeEEecC-cchHHHHHhcCeeeecCCH-HHHHHHHhC
Confidence 333222 10 12456665444332 12222221 111 13344321 1236999999999999985 459999999
Q ss_pred CCEEEecCCCCccccchHHHHH------------CCcee---ee-----CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 012492 365 LPIILNDYIPGQEKGNVPYVVD------------NGAGV---FT-----RSPKETARIVTEWFSTKTDELKRMSENALKL 424 (462)
Q Consensus 365 ~PvI~~~~~~~~~~~n~~~l~~------------~G~g~---~~-----~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~ 424 (462)
+|+|+......-...-++.+++ .|-.+ ++ -+++.+++++ ++| .|++.+++|.+.-++.
T Consensus 508 ~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL-~d~~~r~~~~~~l~~l 585 (608)
T PRK01021 508 TPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DIL-KTSQSKEKQKDACRDL 585 (608)
T ss_pred CCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHh-cCHHHHHHHHHHHHHH
Confidence 9999976542111112233333 11111 12 1478888886 778 6887777777665544
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.9e-17 Score=146.57 Aligned_cols=147 Identities=30% Similarity=0.455 Sum_probs=106.3
Q ss_pred EEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhc-cCCCCeEEeccchhHHHHHHhcchh
Q 012492 270 AVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSE-EWKIPVKVRGFETQMEKWMGACDCI 348 (462)
Q Consensus 270 ~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~-~~~~~V~~~g~~~~~~~l~~~aD~v 348 (462)
+||++||+.|...+.+++..+.+.+... .+++++++++|... ..+..... +...+|.+.+|.++|.++|+.||++
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~---~~~~~viv~~G~~~-~~~~~~~~~~~~~~v~~~~~~~~m~~~m~~aDlv 76 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEK---HKNIQVIVQTGKNN-YEELKIKVENFNPNVKVFGFVDNMAELMAAADLV 76 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHH---HHHCCCCCCCTTCE-CHHHCCCHCCTTCCCEEECSSSSHHHHHHHHSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhc---CCCcEEEEEECCCc-HHHHHHHHhccCCcEEEEechhhHHHHHHHcCEE
Confidence 4789999999876666555554444321 02357888999884 22222222 2227899999999999999999999
Q ss_pred eecCChhhHHHHHHhCCCEEEecCCC---CccccchHHHHHCCceeeeCC----HHHHHHHHHHHhcCCHHHHHHHHHHH
Q 012492 349 ITKAGPGTIAEALIRGLPIILNDYIP---GQEKGNVPYVVDNGAGVFTRS----PKETARIVTEWFSTKTDELKRMSENA 421 (462)
Q Consensus 349 V~~sg~~t~~EAla~G~PvI~~~~~~---~~~~~n~~~l~~~G~g~~~~~----~~~la~~i~~ll~~d~~~~~~m~~~a 421 (462)
|+++|++|++|++++|+|+|+.|... ++|..|+..+.+.|.+..+.+ ++.+.+.|.+++ .++..++.|.+++
T Consensus 77 Is~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~-~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 77 ISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESELNPEELAEAIEELL-SDPEKLKEMAKAA 155 (167)
T ss_dssp EECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHC-CCHH-SHHHCCCH
T ss_pred EeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHH-cCcHHHHHHHHHH
Confidence 99999999999999999999999875 477889999999999877643 567999999999 6887777666554
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.7e-15 Score=137.82 Aligned_cols=333 Identities=13% Similarity=0.078 Sum_probs=199.4
Q ss_pred eEEEE----ecCCCchHHHHHHHHHHHHhhhcCCceEEEEEec-cccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcc
Q 012492 64 NVLIL----MSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDV-CKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPK 138 (462)
Q Consensus 64 kIli~----~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~-~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~ 138 (462)
+|+++ .+++| |..+-..+|.+.|-+.|| .|.+... ..+- .+...+..+.+ +-+.+ +...++.+.
T Consensus 2 ~i~mVsdff~P~~g-gveshiy~lSq~li~lgh---kVvvithayg~r--~girylt~glk--Vyylp-~~v~~n~tT-- 70 (426)
T KOG1111|consen 2 RILMVSDFFYPSTG-GVESHIYALSQCLIRLGH---KVVVITHAYGNR--VGIRYLTNGLK--VYYLP-AVVGYNQTT-- 70 (426)
T ss_pred cceeeCcccccCCC-ChhhhHHHhhcchhhcCC---eEEEEeccccCc--cceeeecCCce--EEEEe-eeeeecccc--
Confidence 45554 47896 999999999999999997 3343321 1110 11111111000 00000 111122211
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccch--HHHHHHHHcCCCCCCeEEEEecCCCCC---Cccccc---
Q 012492 139 WIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQH--IPLWVLKWQGLQKKVIFVTVITDLNTC---HPTWFH--- 210 (462)
Q Consensus 139 ~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~--~~~~~~~~~~~~~~iP~v~~~~d~~~~---~~~~~~--- 210 (462)
+.+. +...+-++..+.+.+..+|+.++++... -++..++.. +..+|..-|.+..+ ...+.+
T Consensus 71 -~ptv------~~~~Pllr~i~lrE~I~ivhghs~fS~lahe~l~hartM----GlktVfTdHSlfGfad~~si~~n~ll 139 (426)
T KOG1111|consen 71 -FPTV------FSDFPLLRPILLRERIEIVHGHSPFSYLAHEALMHARTM----GLKTVFTDHSLFGFADIGSILTNKLL 139 (426)
T ss_pred -hhhh------hccCcccchhhhhhceEEEecCChHHHHHHHHHHHHHhc----CceEEEeccccccccchhhhhhccee
Confidence 1111 1123344566777799999998876432 233444543 54544333332111 111222
Q ss_pred ----CCCcEEEEcCHHHHHHHH-HcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHH
Q 012492 211 ----PRVNRCYCPSKEVAKRAS-YFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKE 285 (462)
Q Consensus 211 ----~~~d~~i~~s~~~~~~l~-~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~ 285 (462)
...|+++|+|...++... +..++++++.+++|-+....+.|. +.. .++.....+++.+++-..+..+
T Consensus 140 ~~sL~~id~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~--~~~------~~S~~i~~ivv~sRLvyrKGiD 211 (426)
T KOG1111|consen 140 PLSLANIDRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPD--AAD------KPSADIITIVVASRLVYRKGID 211 (426)
T ss_pred eeeecCCCcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccC--ccc------cCCCCeeEEEEEeeeeeccchH
Confidence 346899999987776553 446788999999999988777651 111 1223323344444555555566
Q ss_pred HHHHHHHhhhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC----hhh
Q 012492 286 TAMALGESLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG----PGT 356 (462)
Q Consensus 286 ~l~~l~~~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg----~~t 356 (462)
++.+++..+.+ ++|+++++ ++|+++ .+++.++++.+.++|.++|-+ +++.+.|..-|+|+.+|- +++
T Consensus 212 ll~~iIp~vc~---~~p~vrfi-i~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ 287 (426)
T KOG1111|consen 212 LLLEIIPSVCD---KHPEVRFI-IIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMV 287 (426)
T ss_pred HHHHHHHHHHh---cCCCeeEE-EecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHHHHHHHHH
Confidence 66667677665 47898865 567776 377888888899999999998 799999999999998874 899
Q ss_pred HHHHHHhCCCEEEecCCCCccccchHHHHHCCceeee-CCHHHHHHHHHHHhc---CCHHHHHHHHHHHHhhcCCcHHHH
Q 012492 357 IAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFT-RSPKETARIVTEWFS---TKTDELKRMSENALKLAQPEAVVD 432 (462)
Q Consensus 357 ~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~-~~~~~la~~i~~ll~---~d~~~~~~m~~~a~~~~~~~~~~~ 432 (462)
+.||++||+|+|.+..++.+|. |- .+..... ++++.+++++++.+. ..|+.. ..+..+-++|.+
T Consensus 288 ivEAaScGL~VVsTrVGGIpeV-----LP-~d~i~~~~~~~~dl~~~v~~ai~~~~~~p~~~------h~~v~~~y~w~d 355 (426)
T KOG1111|consen 288 IVEAASCGLPVVSTRVGGIPEV-----LP-EDMITLGEPGPDDLVGAVEKAITKLRTLPLEF------HDRVKKMYSWKD 355 (426)
T ss_pred HHHHHhCCCEEEEeecCCcccc-----CC-ccceeccCCChHHHHHHHHHHHHHhccCchhH------HHHHHHhccHHH
Confidence 9999999999999998764443 11 1222222 346777777766652 232221 122234578888
Q ss_pred HHHHHHHHHh
Q 012492 433 IVKDIHDLAA 442 (462)
Q Consensus 433 ia~~i~~l~~ 442 (462)
+|+.-++...
T Consensus 356 Va~rTekvy~ 365 (426)
T KOG1111|consen 356 VAERTEKVYD 365 (426)
T ss_pred HHHHHHHHHH
Confidence 8888877654
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.9e-13 Score=136.92 Aligned_cols=163 Identities=12% Similarity=0.048 Sum_probs=122.9
Q ss_pred CcEEEEEeCCCCC-c-cHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHH--H
Q 012492 268 LPAVLLMGGGEGM-G-PVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWM--G 343 (462)
Q Consensus 268 ~~~iLv~gG~~~~-~-~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~--~ 343 (462)
+++|+++.|+... . .-.+.+..+++.+.+ .+ .+++|..+.... . .+..+||.+.+|.++ .+++ .
T Consensus 296 ~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~----l~-~~viw~~~~~~~--~----~~~p~Nv~i~~w~Pq-~~lL~hp 363 (507)
T PHA03392 296 NGVVYVSFGSSIDTNDMDNEFLQMLLRTFKK----LP-YNVLWKYDGEVE--A----INLPANVLTQKWFPQ-RAVLKHK 363 (507)
T ss_pred CcEEEEECCCCCcCCCCCHHHHHHHHHHHHh----CC-CeEEEEECCCcC--c----ccCCCceEEecCCCH-HHHhcCC
Confidence 3578888888642 1 123444555555543 23 477776664321 1 235679999999975 5788 5
Q ss_pred hcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHHHHHHHH
Q 012492 344 ACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDELKRMSE 419 (462)
Q Consensus 344 ~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~~~~m~~ 419 (462)
.+++||+++|.+++.||+.+|+|+|+.|...+| ..|+..+++.|+|+.++ +++.+.++|.+++ +||+.+++..+
T Consensus 364 ~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ-~~Na~rv~~~G~G~~l~~~~~t~~~l~~ai~~vl-~~~~y~~~a~~ 441 (507)
T PHA03392 364 NVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQ-FYNTNKYVELGIGRALDTVTVSAAQLVLAIVDVI-ENPKYRKNLKE 441 (507)
T ss_pred CCCEEEecCCcccHHHHHHcCCCEEECCCCccH-HHHHHHHHHcCcEEEeccCCcCHHHHHHHHHHHh-CCHHHHHHHHH
Confidence 699999999999999999999999999987665 56999999999998764 4789999999999 79998888887
Q ss_pred HHHhhcCC--cHHHHHHHHHHHHHhcc
Q 012492 420 NALKLAQP--EAVVDIVKDIHDLAAQR 444 (462)
Q Consensus 420 ~a~~~~~~--~~~~~ia~~i~~l~~~~ 444 (462)
-++.+..+ ...++.+.+++.++.-+
T Consensus 442 ls~~~~~~p~~~~~~av~~iE~v~r~~ 468 (507)
T PHA03392 442 LRHLIRHQPMTPLHKAIWYTEHVIRNK 468 (507)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHhCC
Confidence 77777654 37789998888887644
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.8e-14 Score=143.41 Aligned_cols=276 Identities=12% Similarity=0.077 Sum_probs=169.2
Q ss_pred HHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccc-----------cCCCcEE
Q 012492 148 MAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWF-----------HPRVNRC 216 (462)
Q Consensus 148 ~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~-----------~~~~d~~ 216 (462)
.+..++.++.+.++ ..|+|.++.+....++.. .+.++ .+.|++.+.|-..+....|. .-.+|.+
T Consensus 117 vN~~fa~~i~~~~~--~~d~iwihDyhl~llp~~-lr~~~--~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~i 191 (460)
T cd03788 117 VNRKFADAIAEVLR--PGDLVWVHDYHLLLLPQM-LRERG--PDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLI 191 (460)
T ss_pred HHHHHHHHHHHhcC--CCCEEEEeChhhhHHHHH-HHhhC--CCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEE
Confidence 34555655544333 458888887765555433 33332 46788877774322111111 1236878
Q ss_pred EEcCHHHHHHHHHc-----CC------------CCCcEEEcCCCCChhhhcccCC----hHHHHHHcCCCCCCcEEEEEe
Q 012492 217 YCPSKEVAKRASYF-----GL------------EVSQIRVFGLPIRPSFVRAVIS----KDNLRLELQMDPILPAVLLMG 275 (462)
Q Consensus 217 i~~s~~~~~~l~~~-----gi------------~~~~i~v~g~pv~~~~~~~~~~----~~~~r~~l~l~~~~~~iLv~g 275 (462)
...+....+.+.+. +. ...++.++++++++..+.+... ++.+++..+..+++++++.+|
T Consensus 192 gF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vg 271 (460)
T cd03788 192 GFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVD 271 (460)
T ss_pred EECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEec
Confidence 77776655444331 11 1235788999999876553211 122333345555666666666
Q ss_pred CCCCCccHHHHHHHHHHhhhcccCCCCC----ceEEEEccC----CH---HHHHHHhhc----cC------CCCeEEe-c
Q 012492 276 GGEGMGPVKETAMALGESLLDKETGRPI----GQLIIICGR----NR---TLASTLQSE----EW------KIPVKVR-G 333 (462)
Q Consensus 276 G~~~~~~~~~~l~~l~~~l~~~~~~~~~----~~~lvv~G~----~~---~l~~~~~~~----~~------~~~V~~~-g 333 (462)
+....|++..+++++. .+.+. +|+ ++++++++. +. ++.+.++++ +. ..+|.++ |
T Consensus 272 Rl~~~Kgi~~ll~A~~-~ll~~---~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g 347 (460)
T cd03788 272 RLDYSKGIPERLLAFE-RLLER---YPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYR 347 (460)
T ss_pred CccccCCHHHHHHHHH-HHHHh---ChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeC
Confidence 5555677777777664 33331 354 345555432 22 233444332 11 1245554 5
Q ss_pred cc--hhHHHHHHhcchheecCC----hhhHHHHHHhCCC----EEEecCCCCccccchHHHHHCCceeee--CCHHHHHH
Q 012492 334 FE--TQMEKWMGACDCIITKAG----PGTIAEALIRGLP----IILNDYIPGQEKGNVPYVVDNGAGVFT--RSPKETAR 401 (462)
Q Consensus 334 ~~--~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~P----vI~~~~~~~~~~~n~~~l~~~G~g~~~--~~~~~la~ 401 (462)
++ +++..+|+.||++|.+|- +.+++|||+||+| +|+++..+..+. ...|+++ .|++++++
T Consensus 348 ~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~--------~~~g~lv~p~d~~~la~ 419 (460)
T cd03788 348 SLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE--------LSGALLVNPYDIDEVAD 419 (460)
T ss_pred CCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh--------cCCCEEECCCCHHHHHH
Confidence 53 799999999999998873 8999999999999 888876432211 1235555 48999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH
Q 012492 402 IVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDL 440 (462)
Q Consensus 402 ~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l 440 (462)
+|.++++++++.++.+.+++++....++++..++.+.+-
T Consensus 420 ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~ 458 (460)
T cd03788 420 AIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDD 458 (460)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 999999556688889999999999889988888876653
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.59 E-value=2e-13 Score=136.74 Aligned_cols=250 Identities=14% Similarity=0.103 Sum_probs=154.7
Q ss_pred hhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCc----------ccccCCCcEEEEcCHHHHHHHHHcC
Q 012492 162 EYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHP----------TWFHPRVNRCYCPSKEVAKRASYFG 231 (462)
Q Consensus 162 ~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~----------~~~~~~~d~~i~~s~~~~~~l~~~g 231 (462)
+.++.++.+..|..... +... .+.++|..++|...... ..+.+.+|.+++.|+...+.+.+.+
T Consensus 100 ~~~~~i~~~~~P~~~~~---~~~~----~~~~~Vyd~~D~~~~~~~~~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~~~ 172 (373)
T cd04950 100 GFGRPILWYYTPYTLPV---AALL----QASLVVYDCVDDLSAFPGGPPELLEAERRLLKRADLVFTTSPSLYEAKRRLN 172 (373)
T ss_pred CCCCcEEEEeCccHHHH---Hhhc----CCCeEEEEcccchhccCCCCHHHHHHHHHHHHhCCEEEECCHHHHHHHhhCC
Confidence 44555666666665432 2222 36788766666432111 1234678999999999998777665
Q ss_pred CCCCcEEEcCCCCChhhhcccCChH-HHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEc
Q 012492 232 LEVSQIRVFGLPIRPSFVRAVISKD-NLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIIC 310 (462)
Q Consensus 232 i~~~~i~v~g~pv~~~~~~~~~~~~-~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~ 310 (462)
.++.+++|+++.+.+.+..... ..+. + ...+.+.++++ |..+.+...+++.++++. .|+++++++
T Consensus 173 ---~~i~~i~ngvd~~~f~~~~~~~~~~~~-~-~~~~~~~i~y~-G~l~~~~d~~ll~~la~~-------~p~~~~vli- 238 (373)
T cd04950 173 ---PNVVLVPNGVDYEHFAAARDPPPPPAD-L-AALPRPVIGYY-GAIAEWLDLELLEALAKA-------RPDWSFVLI- 238 (373)
T ss_pred ---CCEEEcccccCHHHhhcccccCCChhH-H-hcCCCCEEEEE-eccccccCHHHHHHHHHH-------CCCCEEEEE-
Confidence 5799999999987665321111 0111 1 12345555555 455545445666665543 467876554
Q ss_pred cCCHHHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC---------hhhHHHHHHhCCCEEEecCCCCcccc
Q 012492 311 GRNRTLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG---------PGTIAEALIRGLPIILNDYIPGQEKG 379 (462)
Q Consensus 311 G~~~~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg---------~~t~~EAla~G~PvI~~~~~~~~~~~ 379 (462)
|.+....+ ...+....||+++|++ +++..+|+.||+++.++. |+.+.|+|++|+|||+++.+.
T Consensus 239 G~~~~~~~-~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~----- 312 (373)
T cd04950 239 GPVDVSID-PSALLRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPE----- 312 (373)
T ss_pred CCCcCccC-hhHhccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHH-----
Confidence 55411111 1111224689999998 799999999999987641 678999999999999986421
Q ss_pred chHHHHHCCceeee-CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhcc
Q 012492 380 NVPYVVDNGAGVFT-RSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQR 444 (462)
Q Consensus 380 n~~~l~~~G~g~~~-~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~~ 444 (462)
.....+.++++ .++++++++|.+++.++...+.+ + .++.+..++|+..++.+++.+.+.
T Consensus 313 ---~~~~~~~~~~~~~d~~~~~~ai~~~l~~~~~~~~~--~-~~~~~~~~sW~~~a~~~~~~l~~~ 372 (373)
T cd04950 313 ---VRRYEDEVVLIADDPEEFVAAIEKALLEDGPARER--R-RLRLAAQNSWDARAAEMLEALQEN 372 (373)
T ss_pred ---HHhhcCcEEEeCCCHHHHHHHHHHHHhcCCchHHH--H-HHHHHHHCCHHHHHHHHHHHHHhc
Confidence 11122334444 57999999999976333222221 1 122677899999999999777654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.2e-14 Score=126.26 Aligned_cols=161 Identities=19% Similarity=0.271 Sum_probs=113.2
Q ss_pred ChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeE
Q 012492 254 SKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVK 330 (462)
Q Consensus 254 ~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~ 330 (462)
+++..+.+.+.++++++++++|+....++...++.++ ..+.++ ..+++.+ +++|.+. .+....+.++...++.
T Consensus 1 ~~~~~~~~~~~~~~~~~il~~g~~~~~K~~~~li~a~-~~l~~~--~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~i~ 76 (172)
T PF00534_consen 1 DKDKLREKLKIPDKKKIILFIGRLDPEKGIDLLIEAF-KKLKEK--KNPNYKL-VIVGDGEYKKELKNLIEKLNLKENII 76 (172)
T ss_dssp -HHHHHHHTTT-TTSEEEEEESESSGGGTHHHHHHHH-HHHHHH--HHTTEEE-EEESHCCHHHHHHHHHHHTTCGTTEE
T ss_pred ChHHHHHHcCCCCCCeEEEEEecCccccCHHHHHHHH-HHHHhh--cCCCeEE-EEEccccccccccccccccccccccc
Confidence 3567778888877777666665554455566666555 444321 0256654 4566332 2455566667888999
Q ss_pred Eeccch--hHHHHHHhcchheecC----ChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHH
Q 012492 331 VRGFET--QMEKWMGACDCIITKA----GPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARI 402 (462)
Q Consensus 331 ~~g~~~--~~~~l~~~aD~vV~~s----g~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~ 402 (462)
+.|+.+ ++..+|+.||++|++| +|.+++|||++|+|+|+++.++ +.+.+.+...|++++ ++++++++
T Consensus 77 ~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~-----~~e~~~~~~~g~~~~~~~~~~l~~~ 151 (172)
T PF00534_consen 77 FLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGG-----NNEIINDGVNGFLFDPNDIEELADA 151 (172)
T ss_dssp EEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTH-----HHHHSGTTTSEEEESTTSHHHHHHH
T ss_pred ccccccccccccccccceeccccccccccccccccccccccceeeccccC-----CceeeccccceEEeCCCCHHHHHHH
Confidence 999986 9999999999999885 4899999999999999998532 223344444577775 56999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhh
Q 012492 403 VTEWFSTKTDELKRMSENALKL 424 (462)
Q Consensus 403 i~~ll~~d~~~~~~m~~~a~~~ 424 (462)
|.+++ ++++.++.|+++++++
T Consensus 152 i~~~l-~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 152 IEKLL-NDPELRQKLGKNARER 172 (172)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHH-CCHHHHHHHHHHhcCC
Confidence 99999 7999999999999863
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.5e-12 Score=131.06 Aligned_cols=274 Identities=12% Similarity=0.097 Sum_probs=168.9
Q ss_pred HHHHHHHHHHHHHHHhhCC-CEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcc-----c---c---cCCCc
Q 012492 147 AMAAYYAKEVEAGLMEYKP-DIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPT-----W---F---HPRVN 214 (462)
Q Consensus 147 ~~~~~~~~~l~~~l~~~kP-DvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~-----~---~---~~~~d 214 (462)
..+..++.++.+ ..+| |+|.++.......|.. .|..+ .+.++..+.|-..+.... | + .-.+|
T Consensus 112 ~vN~~fA~~i~~---~~~~~d~vwvhDYhl~l~p~~-lr~~~--~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~d 185 (456)
T TIGR02400 112 RVNRLFAEALAP---LLQPGDIVWVHDYHLMLLPAM-LRELG--VQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYD 185 (456)
T ss_pred HHHHHHHHHHHH---hCCCCCEEEEecchhhHHHHH-HHhhC--CCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCC
Confidence 345566665544 4455 5777766655544433 34433 356665566643221110 0 0 12468
Q ss_pred EEEEcCHHHHHHHHH-----cCC-----------CCCcEEEcCCCCChhhhcccC-Ch------HHHHHHcCCCCCCcEE
Q 012492 215 RCYCPSKEVAKRASY-----FGL-----------EVSQIRVFGLPIRPSFVRAVI-SK------DNLRLELQMDPILPAV 271 (462)
Q Consensus 215 ~~i~~s~~~~~~l~~-----~gi-----------~~~~i~v~g~pv~~~~~~~~~-~~------~~~r~~l~l~~~~~~i 271 (462)
.+-..++...+.+.. .|. ...+|.+++++++.+.+.+.. .+ ..+|++++ ++++|
T Consensus 186 ligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~vI 262 (456)
T TIGR02400 186 LVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLK---GRKLI 262 (456)
T ss_pred EEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcC---CCeEE
Confidence 887878777766543 122 224577899999987654311 11 13555553 45556
Q ss_pred EEEeCCCCCccHHHHHHHHHHhhhcccCCCCC----ceEEEEcc----CCH---HHHHHHhhc-----cC---C--CCeE
Q 012492 272 LLMGGGEGMGPVKETAMALGESLLDKETGRPI----GQLIIICG----RNR---TLASTLQSE-----EW---K--IPVK 330 (462)
Q Consensus 272 Lv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~----~~~lvv~G----~~~---~l~~~~~~~-----~~---~--~~V~ 330 (462)
+.+++....|++...++++...+.+ +|+ +.++++++ .+. ++++.++++ +. . ..+.
T Consensus 263 l~VgRLd~~KGi~~ll~A~~~ll~~----~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~ 338 (456)
T TIGR02400 263 IGVDRLDYSKGLPERLLAFERFLEE----HPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIR 338 (456)
T ss_pred EEccccccccCHHHHHHHHHHHHHh----CccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEE
Confidence 6555555567787777776443332 454 34555553 222 244444433 10 0 1244
Q ss_pred Eec-c--chhHHHHHHhcchheecCC----hhhHHHHHHhCCC----EEEecCCCCccccchHHHHHCCceeee--CCHH
Q 012492 331 VRG-F--ETQMEKWMGACDCIITKAG----PGTIAEALIRGLP----IILNDYIPGQEKGNVPYVVDNGAGVFT--RSPK 397 (462)
Q Consensus 331 ~~g-~--~~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~P----vI~~~~~~~~~~~n~~~l~~~G~g~~~--~~~~ 397 (462)
+++ . .+++..+|++||+++.+|- +++++|||+||+| +|++...+.. ..+. .|+++ .|++
T Consensus 339 ~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~-----~~l~---~gllVnP~d~~ 410 (456)
T TIGR02400 339 YLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAA-----QELN---GALLVNPYDID 410 (456)
T ss_pred EEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCCh-----HHhC---CcEEECCCCHH
Confidence 444 3 3799999999999998873 8999999999999 9998875432 2332 35555 4799
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Q 012492 398 ETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLA 441 (462)
Q Consensus 398 ~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~ 441 (462)
+++++|.++|+.+++.++++.++.++....+++...++.+.+-+
T Consensus 411 ~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 411 GMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 99999999996577888888888888888888888887766543
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-12 Score=128.02 Aligned_cols=231 Identities=19% Similarity=0.210 Sum_probs=149.7
Q ss_pred HHHHHHhhCC-CEEEECCcccchH--HHH-HHHHcCCCCCCeEEEEecCCCCCC----------cccccCCCcEEEEcCH
Q 012492 156 VEAGLMEYKP-DIIISVHPLMQHI--PLW-VLKWQGLQKKVIFVTVITDLNTCH----------PTWFHPRVNRCYCPSK 221 (462)
Q Consensus 156 l~~~l~~~kP-DvVi~~~~~~~~~--~~~-~~~~~~~~~~iP~v~~~~d~~~~~----------~~~~~~~~d~~i~~s~ 221 (462)
+.+.+...+| |+|+..+|..... ... +.+.++ .++|+|..+||..... ..++++.+|.++++|+
T Consensus 55 ~~~~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~--~~~k~i~~ihD~~~~~~~~~~~~~~~~~~~~~~aD~iI~~S~ 132 (333)
T PRK09814 55 LDGILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKK--KQVKIIILIHDIEPLRFDSNYYLMKEEIDMLNLADVLIVHSK 132 (333)
T ss_pred HHHHHhcCCCCCEEEEECCCCchHHHHHHHHHHHHH--cCCEEEEEECCcHHHhccccchhhHHHHHHHHhCCEEEECCH
Confidence 3456788999 9999988765431 122 223222 3799999999975311 1134567899999999
Q ss_pred HHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCC
Q 012492 222 EVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGR 301 (462)
Q Consensus 222 ~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~ 301 (462)
.+++.+.+.|++..++.++++........ .+ . .++..+ .+++.|+++.. +.+. + . .
T Consensus 133 ~~~~~l~~~g~~~~~i~~~~~~~~~~~~~---~~----~---~~~~~~-~i~yaG~l~k~---~~l~---~-~------~ 188 (333)
T PRK09814 133 KMKDRLVEEGLTTDKIIVQGIFDYLNDIE---LV----K---TPSFQK-KINFAGNLEKS---PFLK---N-W------S 188 (333)
T ss_pred HHHHHHHHcCCCcCceEeccccccccccc---cc----c---cccCCc-eEEEecChhhc---hHHH---h-c------C
Confidence 99999998898877887776543221100 00 0 112234 44555666621 1111 1 1 2
Q ss_pred CCceEEEEccCCHHHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheec-C-------------ChhhHHHHHHhCC
Q 012492 302 PIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITK-A-------------GPGTIAEALIRGL 365 (462)
Q Consensus 302 ~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~-s-------------g~~t~~EAla~G~ 365 (462)
+++++ +++|.+.... ...++|+|.|++ +++..+|+..-.+|.. . -|..+.|+|++|+
T Consensus 189 ~~~~l-~i~G~g~~~~------~~~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~ 261 (333)
T PRK09814 189 QGIKL-TVFGPNPEDL------ENSANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGL 261 (333)
T ss_pred CCCeE-EEECCCcccc------ccCCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCC
Confidence 45664 4567664311 244689999998 6888888873223321 1 2566899999999
Q ss_pred CEEEecCCCCccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC
Q 012492 366 PIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQP 427 (462)
Q Consensus 366 PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~ 427 (462)
|||+.+.. ..++.+.+.++|+++++.+++++++.++ +++.+++|++++++.++.
T Consensus 262 PVI~~~~~-----~~~~~V~~~~~G~~v~~~~el~~~l~~~---~~~~~~~m~~n~~~~~~~ 315 (333)
T PRK09814 262 PVIVWSKA-----AIADFIVENGLGFVVDSLEELPEIIDNI---TEEEYQEMVENVKKISKL 315 (333)
T ss_pred CEEECCCc-----cHHHHHHhCCceEEeCCHHHHHHHHHhc---CHHHHHHHHHHHHHHHHH
Confidence 99997752 3456677888999999888999988884 347788899999888754
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.1e-12 Score=129.14 Aligned_cols=283 Identities=12% Similarity=0.040 Sum_probs=166.7
Q ss_pred HHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC-C---------C--------------
Q 012492 150 AYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT-C---------H-------------- 205 (462)
Q Consensus 150 ~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~-~---------~-------------- 205 (462)
.++...+.+.+...++|++|++. |..+.++..+|... .+||+|...|-... . +
T Consensus 134 ~~~i~~~~~~~~~~~~dViH~He-Wm~g~a~~~lK~~~--~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~ 210 (590)
T cd03793 134 AWFLGEFAEQFDDEPAVVAHFHE-WQAGVGLPLLRKRK--VDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGK 210 (590)
T ss_pred HHHHHHHHhhccCCCCeEEEEcc-hhHhHHHHHHHHhC--CCCCEEEEecccccccccccCCcccchhhhhcchhhhhhc
Confidence 34444444444446788888764 54555455566432 58899876663210 0 0
Q ss_pred ---------cccccCCCcEEEEcCHHHHHHHHHc-CCCCCcEEEcCCCCChhhhcccC----------------ChHHHH
Q 012492 206 ---------PTWFHPRVNRCYCPSKEVAKRASYF-GLEVSQIRVFGLPIRPSFVRAVI----------------SKDNLR 259 (462)
Q Consensus 206 ---------~~~~~~~~d~~i~~s~~~~~~l~~~-gi~~~~i~v~g~pv~~~~~~~~~----------------~~~~~r 259 (462)
..+....+|.++++|+.+++..... +.|+++ |++|+++...+.+.. .+..++
T Consensus 211 ~~I~~r~~iE~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~ 288 (590)
T cd03793 211 RGIYHRYCIERAAAHCAHVFTTVSEITAYEAEHLLKRKPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFY 288 (590)
T ss_pred ccchHHHHHHHHHHhhCCEEEECChHHHHHHHHHhCCCCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHh
Confidence 0122345789999999999998875 777766 999999987764321 122346
Q ss_pred HHcCCCCCCcEEEEEeCCCC--CccHHHHHHHHHHhhhccc-CCCCCc---eEEEEccC-C---------HH----HHHH
Q 012492 260 LELQMDPILPAVLLMGGGEG--MGPVKETAMALGESLLDKE-TGRPIG---QLIIICGR-N---------RT----LAST 319 (462)
Q Consensus 260 ~~l~l~~~~~~iLv~gG~~~--~~~~~~~l~~l~~~l~~~~-~~~~~~---~~lvv~G~-~---------~~----l~~~ 319 (462)
.++++++++++++++.|+.- .|++..+++++. .|.... ....+. -++++-+. + .. +++.
T Consensus 289 ~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~-rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~ 367 (590)
T cd03793 289 GHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALA-RLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDT 367 (590)
T ss_pred hhcCCCCCCeEEEEEeeccccccCCHHHHHHHHH-HHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHH
Confidence 66788877777766555553 455555555543 332100 012222 23333332 1 00 1111
Q ss_pred H-------------------------------------------------------------------hhccC----CCC
Q 012492 320 L-------------------------------------------------------------------QSEEW----KIP 328 (462)
Q Consensus 320 ~-------------------------------------------------------------------~~~~~----~~~ 328 (462)
+ ++.++ .++
T Consensus 368 ~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~dr 447 (590)
T cd03793 368 VNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDR 447 (590)
T ss_pred HHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCe
Confidence 1 11111 233
Q ss_pred eE--Eec-cc--------hhHHHHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCC--cee
Q 012492 329 VK--VRG-FE--------TQMEKWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNG--AGV 391 (462)
Q Consensus 329 V~--~~g-~~--------~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G--~g~ 391 (462)
|+ |.+ |+ .+..++|+.||++|.||. |.+++|||+||+|+|+++..+-.. -+..+...+ .|+
T Consensus 448 Vkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~--~v~E~v~~~~~~gi 525 (590)
T cd03793 448 VKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGC--FMEEHIEDPESYGI 525 (590)
T ss_pred EEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhh--hhHHHhccCCCceE
Confidence 43 222 11 246799999999999983 899999999999999999754211 112233222 344
Q ss_pred eeC---------CHHHHHHHHHHHhcCCHHHHHHHHHHHH--hhcCCcHHHHHHHHHHHHHh
Q 012492 392 FTR---------SPKETARIVTEWFSTKTDELKRMSENAL--KLAQPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 392 ~~~---------~~~~la~~i~~ll~~d~~~~~~m~~~a~--~~~~~~~~~~ia~~i~~l~~ 442 (462)
.+. +.++++++|.+++ +. +.|+.+.++.+ +.++.+.|++.++...+...
T Consensus 526 ~V~~r~~~~~~e~v~~La~~m~~~~-~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 526 YIVDRRFKSPDESVQQLTQYMYEFC-QL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred EEecCCccchHHHHHHHHHHHHHHh-CC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 442 2567777788877 33 46666666655 88889999999998887543
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.1e-12 Score=115.80 Aligned_cols=100 Identities=18% Similarity=0.104 Sum_probs=66.8
Q ss_pred EEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHH-H-HHHHhhccCCCCeEEeccc---hhHHHHHHhcch
Q 012492 273 LMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRT-L-ASTLQSEEWKIPVKVRGFE---TQMEKWMGACDC 347 (462)
Q Consensus 273 v~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~-l-~~~~~~~~~~~~V~~~g~~---~~~~~l~~~aD~ 347 (462)
.+|+....++...+++.+ ..+.+ +.++++++++++.... . ......++...+|.+.|+. +++..+++.||+
T Consensus 109 ~~g~~~~~k~~~~~~~a~-~~l~~---~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di 184 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAF-ALLKE---RGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADV 184 (229)
T ss_pred EEEeecccCCHHHHHHHH-HHHHH---hCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCE
Confidence 344333344455455444 44543 2367877665544432 2 2224556677899999984 566667777999
Q ss_pred heecCC----hhhHHHHHHhCCCEEEecCCCCc
Q 012492 348 IITKAG----PGTIAEALIRGLPIILNDYIPGQ 376 (462)
Q Consensus 348 vV~~sg----~~t~~EAla~G~PvI~~~~~~~~ 376 (462)
+++++. +++++|||++|+|+|+++.+...
T Consensus 185 ~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~ 217 (229)
T cd01635 185 FVLPSLREGFGLVVLEAMACGLPVIATDVGGPP 217 (229)
T ss_pred EEecccccCcChHHHHHHhCCCCEEEcCCCCcc
Confidence 999886 89999999999999999976543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.43 E-value=2e-10 Score=118.31 Aligned_cols=147 Identities=16% Similarity=0.123 Sum_probs=98.0
Q ss_pred HHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH-------HHHHHHhhccCCCC
Q 012492 256 DNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR-------TLASTLQSEEWKIP 328 (462)
Q Consensus 256 ~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~-------~l~~~~~~~~~~~~ 328 (462)
++..+.+.-.+++.+|+++.|+...-... .+.+++..|.. .+..++|+.+... .+.+...+.-...+
T Consensus 273 ~~~~~wLd~~~~~svvyvsfGS~~~~~~~-~~~~~~~~l~~-----~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g 346 (482)
T PLN03007 273 QECLKWLDSKKPDSVIYLSFGSVASFKNE-QLFEIAAGLEG-----SGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKG 346 (482)
T ss_pred hHHHHHHhcCCCCceEEEeecCCcCCCHH-HHHHHHHHHHH-----CCCCEEEEEecCCcccchhhcCCHHHHHHhccCC
Confidence 34455555445567899988887543222 33344444433 2456888877531 11112211112468
Q ss_pred eEEeccchhHHHHHHhcch--heecCChhhHHHHHHhCCCEEEecCCCCccccchHHHH---HCCceeee----------
Q 012492 329 VKVRGFETQMEKWMGACDC--IITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVV---DNGAGVFT---------- 393 (462)
Q Consensus 329 V~~~g~~~~~~~l~~~aD~--vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~---~~G~g~~~---------- 393 (462)
+.+.+|.++ .++++.+++ ||+++|.++++||+++|+|+|+.|...+| ..|++.++ +.|+++-.
T Consensus 347 ~~v~~w~PQ-~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ-~~na~~~~~~~~~G~~~~~~~~~~~~~~~ 424 (482)
T PLN03007 347 LIIRGWAPQ-VLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQ-FYNEKLVTQVLRTGVSVGAKKLVKVKGDF 424 (482)
T ss_pred EEEecCCCH-HHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhh-hhhHHHHHHhhcceeEeccccccccccCc
Confidence 899999976 478888875 99999999999999999999999986665 55998766 34555421
Q ss_pred CCHHHHHHHHHHHhcCCH
Q 012492 394 RSPKETARIVTEWFSTKT 411 (462)
Q Consensus 394 ~~~~~la~~i~~ll~~d~ 411 (462)
-+.+++.+++.+++ .++
T Consensus 425 ~~~~~l~~av~~~m-~~~ 441 (482)
T PLN03007 425 ISREKVEKAVREVI-VGE 441 (482)
T ss_pred ccHHHHHHHHHHHh-cCc
Confidence 15788999999999 565
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.5e-10 Score=117.92 Aligned_cols=179 Identities=14% Similarity=0.096 Sum_probs=124.7
Q ss_pred HHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH--------HHHHHHhhccCCCC
Q 012492 257 NLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR--------TLASTLQSEEWKIP 328 (462)
Q Consensus 257 ~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~--------~l~~~~~~~~~~~~ 328 (462)
+..+.+.-.+.+.+|+++.|+...-. .+.+.+++..|... +..|+|+..... .+.+...+.-....
T Consensus 267 ~~~~wLd~~~~~sVvyvsfGS~~~l~-~~q~~ela~gl~~s-----~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG 340 (472)
T PLN02670 267 RIKEWLDKQRVNSVVYVALGTEASLR-REEVTELALGLEKS-----ETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRG 340 (472)
T ss_pred HHHHHHhcCCCCceEEEEecccccCC-HHHHHHHHHHHHHC-----CCCEEEEEcCCcccccchhhcCChHHHHhccCCC
Confidence 34555655445678899988876432 23344555555431 236788775321 01111111111234
Q ss_pred eEEeccchhHHHHHHhcch--heecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC--------CHHH
Q 012492 329 VKVRGFETQMEKWMGACDC--IITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--------SPKE 398 (462)
Q Consensus 329 V~~~g~~~~~~~l~~~aD~--vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--------~~~~ 398 (462)
+.+.+|.++. ++++..++ ||+++|.++++||+++|+|+|..|...+| ..|+..+++.|+|+.+. +.++
T Consensus 341 ~vv~~W~PQ~-~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ-~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~ 418 (472)
T PLN02670 341 MIHVGWVPQV-KILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQ-GLNTRLLHGKKLGLEVPRDERDGSFTSDS 418 (472)
T ss_pred eEEeCcCCHH-HHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhcc-HHHHHHHHHcCeeEEeeccccCCcCcHHH
Confidence 7778999764 78877666 99999999999999999999999987665 55999999999998763 3778
Q ss_pred HHHHHHHHhcCCH---HHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhcc
Q 012492 399 TARIVTEWFSTKT---DELKRMSENALKLAQPEAVVDIVKDIHDLAAQR 444 (462)
Q Consensus 399 la~~i~~ll~~d~---~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~~ 444 (462)
+.++|.++| .++ +.|++..+-+.........+++++.+++++.+.
T Consensus 419 i~~av~~vm-~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 419 VAESVRLAM-VDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred HHHHHHHHh-cCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 999999999 454 566666666666667788899999999988765
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.41 E-value=9.6e-11 Score=120.05 Aligned_cols=141 Identities=16% Similarity=0.098 Sum_probs=97.6
Q ss_pred HHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH-HHHHHHhhccCCCCeEEeccc
Q 012492 257 NLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR-TLASTLQSEEWKIPVKVRGFE 335 (462)
Q Consensus 257 ~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~-~l~~~~~~~~~~~~V~~~g~~ 335 (462)
+....+.-.+.+++|+++.|+..... .+.+.+++..|.. .+..++|++.... .+.+.. ..++.+.+|.
T Consensus 263 ~~~~wl~~~~~~~vvyvsfGs~~~~~-~~~~~~~~~~l~~-----~~~~~lw~~~~~~~~~~~~~-----~~~~~v~~w~ 331 (459)
T PLN02448 263 DYFQWLDSQPEGSVLYVSLGSFLSVS-SAQMDEIAAGLRD-----SGVRFLWVARGEASRLKEIC-----GDMGLVVPWC 331 (459)
T ss_pred HHHHHHcCCCCCceEEEeecccccCC-HHHHHHHHHHHHh-----CCCCEEEEEcCchhhHhHhc-----cCCEEEeccC
Confidence 34445544445678999888875432 3345566666654 2456777654321 121111 2477788998
Q ss_pred hhHHHHHHhcch--heecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHC-CceeeeC---------CHHHHHHHH
Q 012492 336 TQMEKWMGACDC--IITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDN-GAGVFTR---------SPKETARIV 403 (462)
Q Consensus 336 ~~~~~l~~~aD~--vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~-G~g~~~~---------~~~~la~~i 403 (462)
++ .++++.+++ ||+++|.++++||+++|+|+|+.|...+| ..|++.+++. |+|+.+. +.+++.+++
T Consensus 332 pQ-~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ-~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av 409 (459)
T PLN02448 332 DQ-LKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQ-PLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELV 409 (459)
T ss_pred CH-HHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccc-hhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHH
Confidence 65 478888776 99999999999999999999999986665 5599999874 7666542 568999999
Q ss_pred HHHhcCCH
Q 012492 404 TEWFSTKT 411 (462)
Q Consensus 404 ~~ll~~d~ 411 (462)
.++| .++
T Consensus 410 ~~vl-~~~ 416 (459)
T PLN02448 410 KRFM-DLE 416 (459)
T ss_pred HHHh-cCC
Confidence 9999 453
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.1e-10 Score=114.23 Aligned_cols=201 Identities=15% Similarity=0.090 Sum_probs=119.4
Q ss_pred CCcEEEEcCHHHHHH-HHH---cCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHH
Q 012492 212 RVNRCYCPSKEVAKR-ASY---FGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETA 287 (462)
Q Consensus 212 ~~d~~i~~s~~~~~~-l~~---~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l 287 (462)
.+|.+++.|.+..+. +.+ ... ..++..+|... ..........++..+.+.-.++..+|+++.|+...-...++.
T Consensus 193 ~~~~vl~Ntf~eLE~~~~~~~~~~~-~~~v~~vGpl~-~~~~~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~ 270 (442)
T PLN02208 193 SCDVIALRTCKEIEGKFCDYISRQY-HKKVLLTGPMF-PEPDTSKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQ 270 (442)
T ss_pred cCCEEEEECHHHHHHHHHHHHHhhc-CCCEEEEeecc-cCcCCCCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHH
Confidence 345677766544432 111 111 13688787432 211100112345566665555567899999988643333333
Q ss_pred HHHHHh-hhcccCCCCCceEEEEccC--C--H---HHHHHHhhccCCCCeEEeccchhHHHHHHhcc--hheecCChhhH
Q 012492 288 MALGES-LLDKETGRPIGQLIIICGR--N--R---TLASTLQSEEWKIPVKVRGFETQMEKWMGACD--CIITKAGPGTI 357 (462)
Q Consensus 288 ~~l~~~-l~~~~~~~~~~~~lvv~G~--~--~---~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD--~vV~~sg~~t~ 357 (462)
+.+... +.. .| ++|+... + . .+.+...+.-...++.+.+|.++. ++++... +||++.|.+++
T Consensus 271 e~~~~l~~s~----~p---f~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~-~iL~H~~v~~FvtHcG~nS~ 342 (442)
T PLN02208 271 ELCLGMELTG----LP---FLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQP-LILDHPSIGCFVNHCGPGTI 342 (442)
T ss_pred HHHHHHHhCC----Cc---EEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHH-HHhcCCccCeEEccCCchHH
Confidence 322221 221 23 2333321 1 1 111111111123578888999875 6887776 59999999999
Q ss_pred HHHHHhCCCEEEecCCCCccccchHHHHH-CCceeeeC-------CHHHHHHHHHHHhcCCH-HHHHHHHHHHHhh
Q 012492 358 AEALIRGLPIILNDYIPGQEKGNVPYVVD-NGAGVFTR-------SPKETARIVTEWFSTKT-DELKRMSENALKL 424 (462)
Q Consensus 358 ~EAla~G~PvI~~~~~~~~~~~n~~~l~~-~G~g~~~~-------~~~~la~~i~~ll~~d~-~~~~~m~~~a~~~ 424 (462)
+||+++|+|+|+.|...+| ..|++.+++ .|.|+.+. +.+++.++|.+++ +++ +..+++++++++.
T Consensus 343 ~Eai~~GVP~l~~P~~~DQ-~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m-~~~~e~g~~~r~~~~~~ 416 (442)
T PLN02208 343 WESLVSDCQMVLIPFLSDQ-VLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVM-DKDSDLGKLVRSNHTKL 416 (442)
T ss_pred HHHHHcCCCEEecCcchhh-HHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHh-cCCchhHHHHHHHHHHH
Confidence 9999999999999986665 459998776 78887763 5678999999999 454 4455555555444
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.5e-10 Score=115.39 Aligned_cols=160 Identities=16% Similarity=0.139 Sum_probs=107.0
Q ss_pred HHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH--HHHHHHhhccCCCCeEEeccch
Q 012492 259 RLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR--TLASTLQSEEWKIPVKVRGFET 336 (462)
Q Consensus 259 r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~--~l~~~~~~~~~~~~V~~~g~~~ 336 (462)
.+.+.-.++.++|+++.|+.... -.+.+.+++..|.. .+.+++|+++... .....+++.....+..+.+|.+
T Consensus 260 ~~wld~~~~~svvyvsfGS~~~~-~~~~~~e~a~~l~~-----~~~~flw~~~~~~~~~~~~~~~~~~~~~~g~v~~w~P 333 (456)
T PLN02210 260 MEWLDKQARSSVVYISFGSMLES-LENQVETIAKALKN-----RGVPFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWSP 333 (456)
T ss_pred HHHHhCCCCCceEEEEecccccC-CHHHHHHHHHHHHh-----CCCCEEEEEeCCccccchhhHHhhccCCCeEEEecCC
Confidence 34454444567889988887543 23445556555543 2457888776431 1112222211123445679997
Q ss_pred hHHHHHHhcc--hheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHH-CCceeeeC--------CHHHHHHHHHH
Q 012492 337 QMEKWMGACD--CIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVD-NGAGVFTR--------SPKETARIVTE 405 (462)
Q Consensus 337 ~~~~l~~~aD--~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~-~G~g~~~~--------~~~~la~~i~~ 405 (462)
+. ++++.++ +||+++|.++++||+++|+|+|+.|...+| ..|++.+++ .|+|+.+. +.+++++++.+
T Consensus 334 Q~-~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ-~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~ 411 (456)
T PLN02210 334 QE-KILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQ-PIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEA 411 (456)
T ss_pred HH-HHhcCcCcCeEEeeCCcccHHHHHHcCCCEEeccccccc-HHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHH
Confidence 64 7888887 899999999999999999999999987665 459999997 79997763 46789999999
Q ss_pred HhcCCHH---H---HHHHHHHHHhhcCC
Q 012492 406 WFSTKTD---E---LKRMSENALKLAQP 427 (462)
Q Consensus 406 ll~~d~~---~---~~~m~~~a~~~~~~ 427 (462)
++ .+++ . .+++++.+++-..+
T Consensus 412 ~m-~~~~g~~~r~~a~~l~~~a~~Av~~ 438 (456)
T PLN02210 412 VT-EGPAAADIRRRAAELKHVARLALAP 438 (456)
T ss_pred Hh-cCchHHHHHHHHHHHHHHHHHHhcC
Confidence 99 4543 2 23345555544443
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.4e-10 Score=125.62 Aligned_cols=275 Identities=12% Similarity=0.122 Sum_probs=167.5
Q ss_pred HHHHHHHHHHHHHHHhhCC-CEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccc-----------cCCCc
Q 012492 147 AMAAYYAKEVEAGLMEYKP-DIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWF-----------HPRVN 214 (462)
Q Consensus 147 ~~~~~~~~~l~~~l~~~kP-DvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~-----------~~~~d 214 (462)
..+..++.++. +..+| |+|-++.......|.. .|.++ ++.++..++|-..+....+. .-.+|
T Consensus 132 ~vN~~FA~~i~---~~~~~~d~vWvhDYhL~llp~~-lR~~~--~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aD 205 (797)
T PLN03063 132 KANRMFLDVVK---ENYEEGDVVWCHDYHLMFLPQY-LKEYN--NKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTAD 205 (797)
T ss_pred HHHHHHHHHHH---HhcCCCCEEEEecchhhhHHHH-HHHhC--CCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCC
Confidence 34556666554 44455 5776666555554433 34333 57777767665432111110 12467
Q ss_pred EEEEcCHHHHHHHHH-----cCCC-----------CCcEEEcCCCCChhhhcccC-C---hH---HHHHHcCCCCCCcEE
Q 012492 215 RCYCPSKEVAKRASY-----FGLE-----------VSQIRVFGLPIRPSFVRAVI-S---KD---NLRLELQMDPILPAV 271 (462)
Q Consensus 215 ~~i~~s~~~~~~l~~-----~gi~-----------~~~i~v~g~pv~~~~~~~~~-~---~~---~~r~~l~l~~~~~~i 271 (462)
.+-..+....+.+.+ .++. ..+|.+++++|++..+.... . +. .+++.++ ++++|
T Consensus 206 ligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~lI 282 (797)
T PLN03063 206 LIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFA---GRKVI 282 (797)
T ss_pred EEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcC---CCeEE
Confidence 777777776665543 2322 13577899999977554311 1 11 3344443 45666
Q ss_pred EEEeCCCCCccHHHHHHHHHHhhhcccCCCCCce----EEEEccCC----H---HHHHHHhhcc--CCC--------CeE
Q 012492 272 LLMGGGEGMGPVKETAMALGESLLDKETGRPIGQ----LIIICGRN----R---TLASTLQSEE--WKI--------PVK 330 (462)
Q Consensus 272 Lv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~----~lvv~G~~----~---~l~~~~~~~~--~~~--------~V~ 330 (462)
+.+++....|++...+.++...+.+ +|+++ ++.++++. . ++++.++++. ++. .|+
T Consensus 283 l~VgRLd~~KGi~~lL~Afe~lL~~----~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~ 358 (797)
T PLN03063 283 LGVDRLDMIKGIPQKYLAFEKFLEE----NPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIH 358 (797)
T ss_pred EEecccccccCHHHHHHHHHHHHHh----CccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeE
Confidence 6666555567788887776444432 56653 33344332 2 2444454432 211 233
Q ss_pred Eec-cc--hhHHHHHHhcchheecCC----hhhHHHHHHhCCC----EEEecCCCCccccchHHHHHCCceeeeC--CHH
Q 012492 331 VRG-FE--TQMEKWMGACDCIITKAG----PGTIAEALIRGLP----IILNDYIPGQEKGNVPYVVDNGAGVFTR--SPK 397 (462)
Q Consensus 331 ~~g-~~--~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~P----vI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~ 397 (462)
+++ ++ +++..+|+.||++|.+|- +++++|||+||+| +|++...+.. ..+ ...+++++ |++
T Consensus 359 ~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~-----~~l--~~~allVnP~D~~ 431 (797)
T PLN03063 359 HLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAG-----QSL--GAGALLVNPWNIT 431 (797)
T ss_pred EecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCch-----hhh--cCCeEEECCCCHH
Confidence 332 33 688999999999999873 8999999999999 8888764322 222 12456654 799
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Q 012492 398 ETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLA 441 (462)
Q Consensus 398 ~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~ 441 (462)
+++++|.++|..+++.+++..++.++++..+.+..-++.+.+.+
T Consensus 432 ~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l 475 (797)
T PLN03063 432 EVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSEL 475 (797)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHH
Confidence 99999999995588888888888899999888888777765544
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.2e-09 Score=111.02 Aligned_cols=220 Identities=12% Similarity=0.006 Sum_probs=128.6
Q ss_pred CcEEEEcCHHHHHHH-HHcC--CCCCcEEEcCCCCChhhhc-ccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHH
Q 012492 213 VNRCYCPSKEVAKRA-SYFG--LEVSQIRVFGLPIRPSFVR-AVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAM 288 (462)
Q Consensus 213 ~d~~i~~s~~~~~~l-~~~g--i~~~~i~v~g~pv~~~~~~-~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~ 288 (462)
++.+++.|....+.- .+.- .-..++..+|..+...... ...+.+...++|.-.+...+++|+.|+...-...++.+
T Consensus 193 ~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e 272 (446)
T PLN00414 193 CDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQE 272 (446)
T ss_pred CCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccccCcccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHH
Confidence 455666664443322 1110 0013577788543211100 00112345567766667789999999987554444433
Q ss_pred HHHHhhhcccCCCCCceEEEEccC----CH---HHHHHHhhccCCCCeEEeccchhHHHHHHhc--chheecCChhhHHH
Q 012492 289 ALGESLLDKETGRPIGQLIIICGR----NR---TLASTLQSEEWKIPVKVRGFETQMEKWMGAC--DCIITKAGPGTIAE 359 (462)
Q Consensus 289 ~l~~~l~~~~~~~~~~~~lvv~G~----~~---~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~a--D~vV~~sg~~t~~E 359 (462)
++..|.. .+..|+|++-. +. .+.+..++.-....+.+.+|.++. ++++.+ ++||+++|.++++|
T Consensus 273 -~a~gL~~-----s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~-~vL~h~~v~~fvtH~G~nS~~E 345 (446)
T PLN00414 273 -FCLGMEL-----TGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQP-LILSHPSVGCFVNHCGFGSMWE 345 (446)
T ss_pred -HHHHHHH-----cCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHH-HHhcCCccceEEecCchhHHHH
Confidence 3333322 12345555532 11 122222221112356667999764 788777 66999999999999
Q ss_pred HHHhCCCEEEecCCCCccccchHHHH-HCCceeeeC-------CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc----CC
Q 012492 360 ALIRGLPIILNDYIPGQEKGNVPYVV-DNGAGVFTR-------SPKETARIVTEWFSTKTDELKRMSENALKLA----QP 427 (462)
Q Consensus 360 Ala~G~PvI~~~~~~~~~~~n~~~l~-~~G~g~~~~-------~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~----~~ 427 (462)
|+++|+|+|+.|...+| ..|++.++ +.|+|+.+. +.+++.+++.++|.+..+..+++++++++.. ..
T Consensus 346 a~~~GvP~l~~P~~~dQ-~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~ 424 (446)
T PLN00414 346 SLVSDCQIVFIPQLADQ-VLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSP 424 (446)
T ss_pred HHHcCCCEEecCcccch-HHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcC
Confidence 99999999999986665 55999986 578887762 5789999999999422344556666655542 23
Q ss_pred cH-HHHHHHHHHHH
Q 012492 428 EA-VVDIVKDIHDL 440 (462)
Q Consensus 428 ~~-~~~ia~~i~~l 440 (462)
.+ +..+.+.+.++
T Consensus 425 gg~ss~l~~~v~~~ 438 (446)
T PLN00414 425 GLLSGYADKFVEAL 438 (446)
T ss_pred CCcHHHHHHHHHHH
Confidence 33 44455555444
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.1e-10 Score=114.13 Aligned_cols=153 Identities=19% Similarity=0.173 Sum_probs=102.2
Q ss_pred HHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH--HHHHHHhhccCCCCeEEeccc
Q 012492 258 LRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR--TLASTLQSEEWKIPVKVRGFE 335 (462)
Q Consensus 258 ~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~--~l~~~~~~~~~~~~V~~~g~~ 335 (462)
..+.+.-.+...+|+++.|+...-.. +.+.+++..|.. ..++|++.... .+.+...+.-...++.+.+|.
T Consensus 254 c~~WLd~~~~~svvyvsfGS~~~~~~-~~~~ela~gLs~-------~~flWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~ 325 (449)
T PLN02173 254 CTDWLDKRPQGSVVYIAFGSMAKLSS-EQMEEIASAISN-------FSYLWVVRASEESKLPPGFLETVDKDKSLVLKWS 325 (449)
T ss_pred HHHHHhcCCCCceEEEEecccccCCH-HHHHHHHHHhcC-------CCEEEEEeccchhcccchHHHhhcCCceEEeCCC
Confidence 44555544556789999998764332 344555555632 23667664321 121111111114678889999
Q ss_pred hhHHHHHHhcc--hheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHC-CceeeeC--------CHHHHHHHHH
Q 012492 336 TQMEKWMGACD--CIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDN-GAGVFTR--------SPKETARIVT 404 (462)
Q Consensus 336 ~~~~~l~~~aD--~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~-G~g~~~~--------~~~~la~~i~ 404 (462)
++. ++++.++ +||+++|.++++||+++|+|+|+.|...+| ..|+..+++. |+|+-+. +.+++.+++.
T Consensus 326 PQ~-~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ-~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~ 403 (449)
T PLN02173 326 PQL-QVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQ-PMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIK 403 (449)
T ss_pred CHH-HHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcc-hHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHH
Confidence 865 6888877 899999999999999999999999986665 5599999975 7776552 4688999999
Q ss_pred HHhcCCHHHHHHHHHHHH
Q 012492 405 EWFSTKTDELKRMSENAL 422 (462)
Q Consensus 405 ~ll~~d~~~~~~m~~~a~ 422 (462)
+++ .+++ .++|+++++
T Consensus 404 ~vm-~~~~-~~~~r~~a~ 419 (449)
T PLN02173 404 EVM-EGEK-SKEMKENAG 419 (449)
T ss_pred HHh-cCCh-HHHHHHHHH
Confidence 999 4543 233444433
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=99.35 E-value=9.2e-10 Score=112.79 Aligned_cols=155 Identities=20% Similarity=0.178 Sum_probs=104.6
Q ss_pred HHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH-------HHHHHHhhccCCCC
Q 012492 256 DNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR-------TLASTLQSEEWKIP 328 (462)
Q Consensus 256 ~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~-------~l~~~~~~~~~~~~ 328 (462)
++..+.+.-.+++++|+++.|+...-.. +.+.+++..|.. .+..++|+++... .+.....+.-...+
T Consensus 271 ~~~~~WLd~~~~~svVyvsfGS~~~~~~-~~~~ela~gL~~-----~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g 344 (477)
T PLN02863 271 DDVMTWLDTCEDHKVVYVCFGSQVVLTK-EQMEALASGLEK-----SGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRG 344 (477)
T ss_pred HHHHHHHhcCCCCceEEEEeeceecCCH-HHHHHHHHHHHh-----CCCcEEEEECCCcccccchhhCCHHHHHHhccCC
Confidence 3455666555566789999888764333 335556566653 2457888887421 11111111112456
Q ss_pred eEEeccchhHHHHHHh--cchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHH-CCceeeeC-------CHHH
Q 012492 329 VKVRGFETQMEKWMGA--CDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVD-NGAGVFTR-------SPKE 398 (462)
Q Consensus 329 V~~~g~~~~~~~l~~~--aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~-~G~g~~~~-------~~~~ 398 (462)
+.+.+|.++ .++++. +++||+++|.++++||+++|+|+|+.|...+| ..|++.+++ .|+|+.+. +.++
T Consensus 345 ~~v~~w~PQ-~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ-~~na~~v~~~~gvG~~~~~~~~~~~~~~~ 422 (477)
T PLN02863 345 LVIRGWAPQ-VAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQ-FVNASLLVDELKVAVRVCEGADTVPDSDE 422 (477)
T ss_pred EEecCCCCH-HHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccc-hhhHHHHHHhhceeEEeccCCCCCcCHHH
Confidence 888899976 467775 78999999999999999999999999987665 459998775 58887662 4678
Q ss_pred HHHHHHHHhcCCHHHHHHHH
Q 012492 399 TARIVTEWFSTKTDELKRMS 418 (462)
Q Consensus 399 la~~i~~ll~~d~~~~~~m~ 418 (462)
+.+++.+++.++++.|++..
T Consensus 423 v~~~v~~~m~~~~~~r~~a~ 442 (477)
T PLN02863 423 LARVFMESVSENQVERERAK 442 (477)
T ss_pred HHHHHHHHhhccHHHHHHHH
Confidence 88889888744555544433
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.2e-09 Score=112.17 Aligned_cols=179 Identities=16% Similarity=0.127 Sum_probs=110.4
Q ss_pred cEEEcCCCCCh-hhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH
Q 012492 236 QIRVFGLPIRP-SFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR 314 (462)
Q Consensus 236 ~i~v~g~pv~~-~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~ 314 (462)
++..+|.-+.. .-.......++..+.+.-.+...+|+++.|+...-...+ +.+++..|.. .+..++|++....
T Consensus 239 ~v~~vGPl~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q-~~ela~gL~~-----s~~~flWv~~~~~ 312 (480)
T PLN00164 239 TVYPIGPVISLAFTPPAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQ-VREIAAGLER-----SGHRFLWVLRGPP 312 (480)
T ss_pred ceEEeCCCccccccCCCccchHHHHHHHHhCCCCceEEEEecccccCCHHH-HHHHHHHHHH-----cCCCEEEEEcCCc
Confidence 67777744311 100111122345556654445668889988875433333 5556555543 2346777765321
Q ss_pred ----------H----HHHHHhhccCCCCeEEeccchhHHHHHHhcc--hheecCChhhHHHHHHhCCCEEEecCCCCccc
Q 012492 315 ----------T----LASTLQSEEWKIPVKVRGFETQMEKWMGACD--CIITKAGPGTIAEALIRGLPIILNDYIPGQEK 378 (462)
Q Consensus 315 ----------~----l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD--~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~ 378 (462)
. +.+...+.-....+.+.+|.++ ..+++.++ +||+++|.++++||+++|+|+|+.|...+| .
T Consensus 313 ~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ-~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ-~ 390 (480)
T PLN00164 313 AAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQ-KEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQ-H 390 (480)
T ss_pred ccccccccccchhhhCChHHHHHhcCCCeEEeecCCH-HHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccc-h
Confidence 0 1111111111234667799876 47888877 699999999999999999999999986665 4
Q ss_pred cchHHHHH-CCceeeeC---------CHHHHHHHHHHHhcCCHH-HHHHHHHHHHh
Q 012492 379 GNVPYVVD-NGAGVFTR---------SPKETARIVTEWFSTKTD-ELKRMSENALK 423 (462)
Q Consensus 379 ~n~~~l~~-~G~g~~~~---------~~~~la~~i~~ll~~d~~-~~~~m~~~a~~ 423 (462)
.|+..+++ .|+|+.+. +.+++.++|.++| .+++ ..++|++++++
T Consensus 391 ~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm-~~~~~~~~~~r~~a~~ 445 (480)
T PLN00164 391 LNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLM-GGGEEEGRKAREKAAE 445 (480)
T ss_pred hHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHh-cCCchhHHHHHHHHHH
Confidence 59988765 69887652 4689999999999 4532 23344444333
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.4e-09 Score=100.84 Aligned_cols=331 Identities=12% Similarity=0.076 Sum_probs=184.6
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhH
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHS 142 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 142 (462)
|||+|=.... -|.+-...|..+|+++|+ ++.++.. .+..+... ..+++..+.........+
T Consensus 1 mkVwiDI~n~--~hvhfFk~lI~elekkG~---ev~iT~r-------d~~~v~~L-------Ld~ygf~~~~Igk~g~~t 61 (346)
T COG1817 1 MKVWIDIGNP--PHVHFFKNLIWELEKKGH---EVLITCR-------DFGVVTEL-------LDLYGFPYKSIGKHGGVT 61 (346)
T ss_pred CeEEEEcCCc--chhhHHHHHHHHHHhCCe---EEEEEEe-------ecCcHHHH-------HHHhCCCeEeecccCCcc
Confidence 6888877666 688889999999999985 5554421 11111111 012222222111111111
Q ss_pred HH-HHHHHHHHHHHHHHHHHhhCCCEEEECCc-ccchHHHHHHHHcCCCCCCeEEEEecC-CCCCCcccccCCCcEEEEc
Q 012492 143 CY-LAAMAAYYAKEVEAGLMEYKPDIIISVHP-LMQHIPLWVLKWQGLQKKVIFVTVITD-LNTCHPTWFHPRVNRCYCP 219 (462)
Q Consensus 143 ~~-~~~~~~~~~~~l~~~l~~~kPDvVi~~~~-~~~~~~~~~~~~~~~~~~iP~v~~~~d-~~~~~~~~~~~~~d~~i~~ 219 (462)
+. ...-.......|.+++.+++||+.+..+. .... .+. + .++|.+.+... ..-.......+.++.++.+
T Consensus 62 l~~Kl~~~~eR~~~L~ki~~~~kpdv~i~~~s~~l~r----vaf--g--Lg~psIi~~D~ehA~~qnkl~~Pla~~ii~P 133 (346)
T COG1817 62 LKEKLLESAERVYKLSKIIAEFKPDVAIGKHSPELPR----VAF--G--LGIPSIIFVDNEHAEAQNKLTLPLADVIITP 133 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCceEeecCCcchhh----HHh--h--cCCceEEecCChhHHHHhhcchhhhhheecc
Confidence 11 11122345568889999999999998653 2222 121 1 48898865432 2111234556788989888
Q ss_pred CHHHHHHHHHcCCCCCcEEEcCCCCCh--hhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCc-----cHHHHHHHHHH
Q 012492 220 SKEVAKRASYFGLEVSQIRVFGLPIRP--SFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMG-----PVKETAMALGE 292 (462)
Q Consensus 220 s~~~~~~l~~~gi~~~~i~v~g~pv~~--~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~-----~~~~~l~~l~~ 292 (462)
..-....+...|..+.++.-. +++-. .+....++ +++.+++|+.++.++|+.-.-+.++. .....+..+++
T Consensus 134 ~~~~~~~~~~~G~~p~~i~~~-~giae~~~v~~f~pd-~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~ 211 (346)
T COG1817 134 EAIDEEELLDFGADPNKISGY-NGIAELANVYGFVPD-PEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIK 211 (346)
T ss_pred cccchHHHHHhCCCccceecc-cceeEEeecccCCCC-HHHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHH
Confidence 777766777778766655432 22211 11111123 45667899998778777754443321 11223445556
Q ss_pred hhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecC
Q 012492 293 SLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDY 372 (462)
Q Consensus 293 ~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~ 372 (462)
.|++ .+ +++..+..+.++..+.+ .++....-.-|--.++--|+++|+.+| .+..||+.+|+|+|.+..
T Consensus 212 ~l~k----~g----iV~ipr~~~~~eife~~---~n~i~pk~~vD~l~Llyya~lvig~gg-TMarEaAlLGtpaIs~~p 279 (346)
T COG1817 212 ELKK----YG----IVLIPREKEQAEIFEGY---RNIIIPKKAVDTLSLLYYATLVIGAGG-TMAREAALLGTPAISCYP 279 (346)
T ss_pred HHHh----Cc----EEEecCchhHHHHHhhh---ccccCCcccccHHHHHhhhheeecCCc-hHHHHHHHhCCceEEecC
Confidence 6543 22 34455555455555533 222222222233458889999999555 567999999999999884
Q ss_pred CCCccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHh
Q 012492 373 IPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 373 ~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~ 442 (462)
+ .-..--+++++.|.-+-..++.+..+.+.++| .++...+ ++ -.....-...|.+.++++++
T Consensus 280 G--kll~vdk~lie~G~~~~s~~~~~~~~~a~~~l-~~~~~kK-~~----~~k~e~~~~~ii~~ve~~~e 341 (346)
T COG1817 280 G--KLLAVDKYLIEKGLLYHSTDEIAIVEYAVRNL-KYRRLKK-TG----VLKLEDPTRLIIDVVEEMLE 341 (346)
T ss_pred C--ccccccHHHHhcCceeecCCHHHHHHHHHHHh-hchhhcc-cc----ccccccHHHHHHHHHHHHhh
Confidence 3 21222357888898887778777777777777 4443211 11 01112344556666666554
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.8e-09 Score=107.87 Aligned_cols=179 Identities=15% Similarity=0.167 Sum_probs=111.6
Q ss_pred cEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCC--
Q 012492 236 QIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRN-- 313 (462)
Q Consensus 236 ~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~-- 313 (462)
++..+|.-+.... .. .+.+...+.+.-.+...+|+++.|+...-.. +.+.+++..|.. .+..|+|++...
T Consensus 233 ~v~~VGPl~~~~~-~~-~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~-~q~~ela~gL~~-----s~~~flW~~r~~~~ 304 (481)
T PLN02992 233 PVYPIGPLCRPIQ-SS-KTDHPVLDWLNKQPNESVLYISFGSGGSLSA-KQLTELAWGLEM-----SQQRFVWVVRPPVD 304 (481)
T ss_pred ceEEecCccCCcC-CC-cchHHHHHHHHcCCCCceEEEeecccccCCH-HHHHHHHHHHHH-----cCCCEEEEEeCCcc
Confidence 5777775433211 11 1122344555444445689999888754322 233445444543 123678887311
Q ss_pred ----------------H----HHHHHHhhccCCCCeEEeccchhHHHHHHhcch--heecCChhhHHHHHHhCCCEEEec
Q 012492 314 ----------------R----TLASTLQSEEWKIPVKVRGFETQMEKWMGACDC--IITKAGPGTIAEALIRGLPIILND 371 (462)
Q Consensus 314 ----------------~----~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~--vV~~sg~~t~~EAla~G~PvI~~~ 371 (462)
. .+.+...+.-...++.+.+|.++. ++++...+ ||+++|.++++||+.+|+|+|+.|
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~-~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P 383 (481)
T PLN02992 305 GSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQA-EILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWP 383 (481)
T ss_pred cccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHH-HHhCCcccCeeEecCchhHHHHHHHcCCCEEecC
Confidence 0 011111111123468888999764 78888775 999999999999999999999999
Q ss_pred CCCCccccchHHHH-HCCceeeeC------CHHHHHHHHHHHhcCCHH------HHHHHHHHHHhhc
Q 012492 372 YIPGQEKGNVPYVV-DNGAGVFTR------SPKETARIVTEWFSTKTD------ELKRMSENALKLA 425 (462)
Q Consensus 372 ~~~~~~~~n~~~l~-~~G~g~~~~------~~~~la~~i~~ll~~d~~------~~~~m~~~a~~~~ 425 (462)
...+| ..|+..++ +.|+|+.+. +.+++.+++.+++ .+++ ..+++++.+++-.
T Consensus 384 ~~~DQ-~~na~~~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm-~~~~g~~~r~~a~~~~~~a~~Av 448 (481)
T PLN02992 384 LFAEQ-NMNAALLSDELGIAVRSDDPKEVISRSKIEALVRKVM-VEEEGEEMRRKVKKLRDTAEMSL 448 (481)
T ss_pred ccchh-HHHHHHHHHHhCeeEEecCCCCcccHHHHHHHHHHHh-cCCchHHHHHHHHHHHHHHHHHh
Confidence 87665 45999985 789987763 4678999999999 4431 2344555555444
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.4e-10 Score=114.20 Aligned_cols=226 Identities=17% Similarity=0.075 Sum_probs=135.4
Q ss_pred CCcEEEEcCHHHHHHHHHc--CCCCCcEEEcCCCCChhhhccc------CChHHHHHHcCCCCCCcEEEEEeCCCCCccH
Q 012492 212 RVNRCYCPSKEVAKRASYF--GLEVSQIRVFGLPIRPSFVRAV------ISKDNLRLELQMDPILPAVLLMGGGEGMGPV 283 (462)
Q Consensus 212 ~~d~~i~~s~~~~~~l~~~--gi~~~~i~v~g~pv~~~~~~~~------~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~ 283 (462)
..+++++.+......+... .+...++.++...++.+...+. ..++..|...+..... +++....+...++.
T Consensus 209 ~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d-~~~~siN~~~pgkd 287 (495)
T KOG0853|consen 209 LAWKILVNSYFTKRQFKATFVSLSNSDITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGID-RFFPSINRFEPGKD 287 (495)
T ss_pred ccceEecchhhhhhhhhhhhhhcCCCCcceeeccccchhccccccccchhcccccceeeeecccc-eEeeeeeecCCCCC
Confidence 4567788887777666543 3344446666666765543320 1112223333443222 23333333444433
Q ss_pred HHHHHHHHHhhhcccCC--CCCceEEEEccCC-------H------HHHHHHhhccCC-CCeEEeccchhHHHHHHhcch
Q 012492 284 KETAMALGESLLDKETG--RPIGQLIIICGRN-------R------TLASTLQSEEWK-IPVKVRGFETQMEKWMGACDC 347 (462)
Q Consensus 284 ~~~l~~l~~~l~~~~~~--~~~~~~lvv~G~~-------~------~l~~~~~~~~~~-~~V~~~g~~~~~~~l~~~aD~ 347 (462)
..++......+.+.... .+..+ ++++|+. . ++.+.++++++. +.+.|+....+...+..+||.
T Consensus 288 ~~l~l~a~~~~~~~i~~~~~~~~h-l~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~yrl~adt 366 (495)
T KOG0853|consen 288 QDLALPAFTLLHDSIPEPSISSEH-LVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKYRLAADT 366 (495)
T ss_pred ceeehhhHHhhhcccCCCCCCceE-EEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHHHHHHHhc
Confidence 33222222333332211 12334 3445511 1 245566677764 556676776655556655554
Q ss_pred ---heecCC---hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeCC-HH---HHHHHHHHHhcCCHHHHHHH
Q 012492 348 ---IITKAG---PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRS-PK---ETARIVTEWFSTKTDELKRM 417 (462)
Q Consensus 348 ---vV~~sg---~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~-~~---~la~~i~~ll~~d~~~~~~m 417 (462)
++.+++ |.|++|||+||+|||+++.++.-+. +++.-.|+.++. ++ .+++++.++. .||+++.+|
T Consensus 367 ~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~Ei-----V~~~~tG~l~dp~~e~~~~~a~~~~kl~-~~p~l~~~~ 440 (495)
T KOG0853|consen 367 KGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEI-----VVHGVTGLLIDPGQEAVAELADALLKLR-RDPELWARM 440 (495)
T ss_pred ceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEE-----EEcCCcceeeCCchHHHHHHHHHHHHHh-cCHHHHHHH
Confidence 334544 9999999999999999997654332 333345887764 33 4899999999 799999999
Q ss_pred HHHHHhhcCC-cHHHHHHHHHHHHHhccC
Q 012492 418 SENALKLAQP-EAVVDIVKDIHDLAAQRG 445 (462)
Q Consensus 418 ~~~a~~~~~~-~~~~~ia~~i~~l~~~~~ 445 (462)
++++++..+. |+|..+.+.|.+.+.+-.
T Consensus 441 ~~~G~~rV~e~fs~~~~~~ri~~~~~~~~ 469 (495)
T KOG0853|consen 441 GKNGLKRVKEMFSWQHYSERIASVLGKYL 469 (495)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhHhcC
Confidence 9999999876 899999999998887543
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.3e-08 Score=95.47 Aligned_cols=269 Identities=19% Similarity=0.255 Sum_probs=161.6
Q ss_pred HHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC----------CCc---------ccccCCCcEEEE
Q 012492 158 AGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT----------CHP---------TWFHPRVNRCYC 218 (462)
Q Consensus 158 ~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~----------~~~---------~~~~~~~d~~i~ 218 (462)
.++-...||+|+...|..-.. +.++...+...+.+++.=-|.+.- .|+ ..+-+.+|..+|
T Consensus 97 aL~~~~~~~~ilvQNPP~iPt-liv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~~~~E~~fgk~a~~nLc 175 (444)
T KOG2941|consen 97 ALFVLRPPDIILVQNPPSIPT-LIVCVLYSILTGAKFIIDWHNYGYSLQLKLKLGFQHPLVRLVRWLEKYFGKLADYNLC 175 (444)
T ss_pred HHHhccCCcEEEEeCCCCCch-HHHHHHHHHHhcceEEEEehhhHHHHHHHhhcCCCCchHHHHHHHHHHhhcccccchh
Confidence 345577899998888653221 222222111135666543343321 111 123467889999
Q ss_pred cCHHHHHHHHHc-CCCCCcEEEcCCC-----CCh---hhhcc-----------cC----ChHHHHHHcC-----CCCCCc
Q 012492 219 PSKEVAKRASYF-GLEVSQIRVFGLP-----IRP---SFVRA-----------VI----SKDNLRLELQ-----MDPILP 269 (462)
Q Consensus 219 ~s~~~~~~l~~~-gi~~~~i~v~g~p-----v~~---~~~~~-----------~~----~~~~~r~~l~-----l~~~~~ 269 (462)
++..+++++.+. |+.+.++.+--.| ++. .|..- +. ++..+-+++. ..++.|
T Consensus 176 VT~AMr~dL~qnWgi~ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~p 255 (444)
T KOG2941|consen 176 VTKAMREDLIQNWGINRAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKKDASGDVQLLPERP 255 (444)
T ss_pred hHHHHHHHHHHhcCCceeEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccccchhhhhhHhhhcccchhhhccCCC
Confidence 999999999875 8754444433222 111 01110 00 1111112221 234677
Q ss_pred EEEEEeCCCCCc-cHHHHHHHHH---HhhhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEE-eccc--hhHH
Q 012492 270 AVLLMGGGEGMG-PVKETAMALG---ESLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKV-RGFE--TQME 339 (462)
Q Consensus 270 ~iLv~gG~~~~~-~~~~~l~~l~---~~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~-~g~~--~~~~ 339 (462)
.++|+..+.... ++.-++.++. +.+.+.....|.. +.++.|.++ .+.++++++.+. +|.+ ..|. +|.+
T Consensus 256 allvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~l-lciITGKGPlkE~Y~~~I~~~~~~-~v~~~tpWL~aEDYP 333 (444)
T KOG2941|consen 256 ALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSL-LCIITGKGPLKEKYSQEIHEKNLQ-HVQVCTPWLEAEDYP 333 (444)
T ss_pred eEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcE-EEEEcCCCchhHHHHHHHHHhccc-ceeeeecccccccch
Confidence 888887777653 3333333332 1222211123554 456778876 255667766553 4544 4665 8999
Q ss_pred HHHHhcchhee----cCC---hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCC-ceeeeCCHHHHHHHHHHHhc---
Q 012492 340 KWMGACDCIIT----KAG---PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNG-AGVFTRSPKETARIVTEWFS--- 408 (462)
Q Consensus 340 ~l~~~aD~vV~----~sg---~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G-~g~~~~~~~~la~~i~~ll~--- 408 (462)
.+++.||+=|+ +|| ++-+....-||+|+++.++. ....|+++| .|.+..|.+++++++..++.
T Consensus 334 ~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fk------cl~ELVkh~eNGlvF~Ds~eLa~ql~~lf~~fp 407 (444)
T KOG2941|consen 334 KLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFK------CLDELVKHGENGLVFEDSEELAEQLQMLFKNFP 407 (444)
T ss_pred hHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecch------hHHHHHhcCCCceEeccHHHHHHHHHHHHhcCC
Confidence 99999999663 456 89999999999999999874 344577776 68889999999999999994
Q ss_pred CCHHHHHHHHHHHHhhcC---CcHHHHHHH
Q 012492 409 TKTDELKRMSENALKLAQ---PEAVVDIVK 435 (462)
Q Consensus 409 ~d~~~~~~m~~~a~~~~~---~~~~~~ia~ 435 (462)
+|...+.++++++++..+ ..+|++++.
T Consensus 408 ~~a~~l~~lkkn~~e~~e~RW~~~W~~~~~ 437 (444)
T KOG2941|consen 408 DNADELNQLKKNLREEQELRWDESWERTAL 437 (444)
T ss_pred CCHHHHHHHHHhhHHHHhhhHHHHHHHhhh
Confidence 277888888888877632 345555554
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.5e-08 Score=103.87 Aligned_cols=181 Identities=15% Similarity=0.113 Sum_probs=113.9
Q ss_pred HHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH---HHH-----HHHhhccCCCC
Q 012492 257 NLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR---TLA-----STLQSEEWKIP 328 (462)
Q Consensus 257 ~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~---~l~-----~~~~~~~~~~~ 328 (462)
...+.+.-.+...+|+|..|+...-...+ +.+++..|.. .+..|+|++.... ... +...+.-...+
T Consensus 272 ~cl~wLd~~~~~sVvyvsfGS~~~~~~~q-~~e~a~gl~~-----~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g 345 (491)
T PLN02534 272 QCLEWLDSMKPRSVIYACLGSLCRLVPSQ-LIELGLGLEA-----SKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRG 345 (491)
T ss_pred HHHHHHhcCCCCceEEEEecccccCCHHH-HHHHHHHHHh-----CCCCEEEEEecCccccchhhhcCchhhHHhhccCC
Confidence 34556665555688999998876433333 3333344433 1236888886321 111 11121112457
Q ss_pred eEEeccchhHHHHHHhcch--heecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHC-Cceeee------------
Q 012492 329 VKVRGFETQMEKWMGACDC--IITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDN-GAGVFT------------ 393 (462)
Q Consensus 329 V~~~g~~~~~~~l~~~aD~--vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~-G~g~~~------------ 393 (462)
+.+.+|.++ .++++.+++ ||+++|.++++||+++|+|+|+.|...+| ..|+..+++. |.|+-+
T Consensus 346 ~~v~~w~pq-~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq-~~na~~~~e~~~vGv~~~~~~~~~~~~~~ 423 (491)
T PLN02534 346 LLIKGWAPQ-VLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQ-FLNEKLIVEVLRIGVRVGVEVPVRWGDEE 423 (491)
T ss_pred eeccCCCCH-HHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccH-HHHHHHHHHhhcceEEecccccccccccc
Confidence 888899987 579988887 99999999999999999999999986665 4598888743 554422
Q ss_pred -----CCHHHHHHHHHHHhcC-C---HHHH---HHHHHHHHhhcCC--cHHHHHHHHHHHHHhccC
Q 012492 394 -----RSPKETARIVTEWFST-K---TDEL---KRMSENALKLAQP--EAVVDIVKDIHDLAAQRG 445 (462)
Q Consensus 394 -----~~~~~la~~i~~ll~~-d---~~~~---~~m~~~a~~~~~~--~~~~~ia~~i~~l~~~~~ 445 (462)
-+.+++++++.+++.. . .+.| +++++.+++-... .+..++.+.+.++..|++
T Consensus 424 ~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~~~~ 489 (491)
T PLN02534 424 RVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLKQQS 489 (491)
T ss_pred cccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhc
Confidence 2467899999999931 1 2222 2233444433332 345677777777776654
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.15 E-value=1e-07 Score=89.56 Aligned_cols=268 Identities=13% Similarity=0.074 Sum_probs=161.7
Q ss_pred HHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC------------CC----------cc-------c
Q 012492 158 AGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT------------CH----------PT-------W 208 (462)
Q Consensus 158 ~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~------------~~----------~~-------~ 208 (462)
+.+-++.||+-|-+.+++-..|+ -+.. .++|++++.|=..- .. .+ |
T Consensus 144 Eai~r~~Pdi~IDtMGY~fs~p~--~r~l---~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY~~ 218 (465)
T KOG1387|consen 144 EAIIRFPPDIFIDTMGYPFSYPI--FRRL---RRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLYQS 218 (465)
T ss_pred HHHHhCCchheEecCCCcchhHH--HHHH---ccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHHHh
Confidence 55678999999988876554432 2322 38999988762110 00 01 1
Q ss_pred ccCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCC-CCCcEEEEEeCCCCCccHHHHH
Q 012492 209 FHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMD-PILPAVLLMGGGEGMGPVKETA 287 (462)
Q Consensus 209 ~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~-~~~~~iLv~gG~~~~~~~~~~l 287 (462)
.-..+|.+++.|..+.+-+... -...+..++.+|.+.+ .++...+-. .+.+.+|..|.-.+.++.. .+
T Consensus 219 ~G~~ad~vm~NssWT~nHI~qi-W~~~~~~iVyPPC~~e---------~lks~~~te~~r~~~ll~l~Q~RPEKnH~-~L 287 (465)
T KOG1387|consen 219 AGSKADIVMTNSSWTNNHIKQI-WQSNTCSIVYPPCSTE---------DLKSKFGTEGERENQLLSLAQFRPEKNHK-IL 287 (465)
T ss_pred ccccceEEEecchhhHHHHHHH-hhccceeEEcCCCCHH---------HHHHHhcccCCcceEEEEEeecCcccccH-HH
Confidence 1245677888877766554432 1124566676676543 222222222 2334455555444444433 33
Q ss_pred HHHHHhhhcccC--CCCCceEEEEccC-CHH-------HHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheec----
Q 012492 288 MALGESLLDKET--GRPIGQLIIICGR-NRT-------LASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITK---- 351 (462)
Q Consensus 288 ~~l~~~l~~~~~--~~~~~~~lvv~G~-~~~-------l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~---- 351 (462)
+..+-.+...-. .-++++++++++- +++ +.+..+++.++.+|.|.-.+ +++.+++..|.+-|..
T Consensus 288 ql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNE 367 (465)
T KOG1387|consen 288 QLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKATIGVHTMWNE 367 (465)
T ss_pred HHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhccceeehhhhhhh
Confidence 322111111000 1134565554432 221 33344456788899987554 6899999999987653
Q ss_pred CChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHH
Q 012492 352 AGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVV 431 (462)
Q Consensus 352 sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~ 431 (462)
-.|..+.|+||+|+=.|+.+..+ +..+.+........|++..+.++.++++.+++..|++.|..|+++||+...+++-.
T Consensus 368 HFGIsVVEyMAAGlIpi~h~SgG-P~lDIV~~~~G~~tGFla~t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~ 446 (465)
T KOG1387|consen 368 HFGISVVEYMAAGLIPIVHNSGG-PLLDIVTPWDGETTGFLAPTDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGEL 446 (465)
T ss_pred hcchhHHHHHhcCceEEEeCCCC-CceeeeeccCCccceeecCChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHH
Confidence 24788999999999888877643 22333333333456888899999999999988778888999999999988888777
Q ss_pred HHHHHHHHHHh
Q 012492 432 DIVKDIHDLAA 442 (462)
Q Consensus 432 ~ia~~i~~l~~ 442 (462)
...+.+.+.+.
T Consensus 447 ~F~kd~~~~i~ 457 (465)
T KOG1387|consen 447 KFDKDWENPIC 457 (465)
T ss_pred HHHHhHhHHHH
Confidence 77666665443
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.6e-09 Score=114.71 Aligned_cols=276 Identities=11% Similarity=0.074 Sum_probs=158.7
Q ss_pred HHHHHHHHHHHHHHHhhCC-CEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC------ccc---c--cCCCc
Q 012492 147 AMAAYYAKEVEAGLMEYKP-DIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH------PTW---F--HPRVN 214 (462)
Q Consensus 147 ~~~~~~~~~l~~~l~~~kP-DvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~------~~~---~--~~~~d 214 (462)
..+..++.++.+ ..+| |+|-++.......|.. .|.++ ++.++-.+.|-..+.. |.+ + .-.+|
T Consensus 118 ~vN~~fA~~~~~---~~~~~d~vwvhDYhl~l~p~~-lr~~~--~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~D 191 (726)
T PRK14501 118 RVNQRFAEAIAA---IARPGDVVWVHDYQLMLLPAM-LRERL--PDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGAD 191 (726)
T ss_pred HHHHHHHHHHHH---hcCCCCEEEEeCchhhhHHHH-HHhhC--CCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCC
Confidence 345666766644 4445 6666666555544433 34333 4566655555433211 100 0 12467
Q ss_pred EEEEcCHHHHHHHHH-----cCCC-----------CCcEEEcCCCCChhhhcccC-Ch------HHHHHHcCCCCCCcEE
Q 012492 215 RCYCPSKEVAKRASY-----FGLE-----------VSQIRVFGLPIRPSFVRAVI-SK------DNLRLELQMDPILPAV 271 (462)
Q Consensus 215 ~~i~~s~~~~~~l~~-----~gi~-----------~~~i~v~g~pv~~~~~~~~~-~~------~~~r~~l~l~~~~~~i 271 (462)
.+-..+....+.+.+ .+.+ ..++.+++++|+...+.+.. ++ +.+|+.+ +++++|
T Consensus 192 ligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~~i 268 (726)
T PRK14501 192 LIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDL---RGRKII 268 (726)
T ss_pred eEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHc---CCCEEE
Confidence 777777765555432 1321 12477889999887654321 11 1233433 345555
Q ss_pred EEEeCCCCCccHHHHHHHHHHhhhcccCCCCC----ceEEEEcc---CC-H---HHHHHHhhc----c-C-----CCCe-
Q 012492 272 LLMGGGEGMGPVKETAMALGESLLDKETGRPI----GQLIIICG---RN-R---TLASTLQSE----E-W-----KIPV- 329 (462)
Q Consensus 272 Lv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~----~~~lvv~G---~~-~---~l~~~~~~~----~-~-----~~~V- 329 (462)
+.+|+....|++...++++...+.+ +|+ ++++++++ .+ . ++++.++++ + . ...|
T Consensus 269 l~VgRl~~~Kgi~~~l~A~~~ll~~----~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~ 344 (726)
T PRK14501 269 LSIDRLDYTKGIPRRLLAFERFLEK----NPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIH 344 (726)
T ss_pred EEecCcccccCHHHHHHHHHHHHHh----CccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEE
Confidence 5555555567788777776444432 454 45555542 22 1 234444332 1 1 1123
Q ss_pred EEeccc--hhHHHHHHhcchheecCC----hhhHHHHHHhCCC----EEEecCCCCccccchHHHHHCCceeee--CCHH
Q 012492 330 KVRGFE--TQMEKWMGACDCIITKAG----PGTIAEALIRGLP----IILNDYIPGQEKGNVPYVVDNGAGVFT--RSPK 397 (462)
Q Consensus 330 ~~~g~~--~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~P----vI~~~~~~~~~~~n~~~l~~~G~g~~~--~~~~ 397 (462)
.+.|++ +++..+|+.||+++.+|- +.+++|||+||+| +|++...++ +..+. + |+++ .|++
T Consensus 345 ~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~-----~~~l~--~-~llv~P~d~~ 416 (726)
T PRK14501 345 YFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGA-----AAELA--E-ALLVNPNDIE 416 (726)
T ss_pred EEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccch-----hHHhC--c-CeEECCCCHH
Confidence 355655 799999999999998873 8999999999664 444443222 22232 2 4554 4799
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 398 ETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 398 ~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
+++++|.++|..+++.+++..+++++.+..++++..++.+.+.+++
T Consensus 417 ~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 417 GIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELRE 462 (726)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9999999999434455555556788888888999888887776643
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.9e-09 Score=112.40 Aligned_cols=172 Identities=17% Similarity=0.140 Sum_probs=106.4
Q ss_pred HHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccc
Q 012492 256 DNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFE 335 (462)
Q Consensus 256 ~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~ 335 (462)
+++...+.-+.++.+|+++.|+.....-.+.+..+++.+.+ .|. +++|....... .. +..|+.+..|.
T Consensus 264 ~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~----~~~-~~iW~~~~~~~--~~-----l~~n~~~~~W~ 331 (500)
T PF00201_consen 264 EELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFEN----LPQ-RFIWKYEGEPP--EN-----LPKNVLIVKWL 331 (500)
T ss_dssp HHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHC----STT-EEEEEETCSHG--CH-----HHTTEEEESS-
T ss_pred cccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhh----CCC-ccccccccccc--cc-----ccceEEEeccc
Confidence 44444443323567899998887643333445566666654 244 78888766421 22 23589999999
Q ss_pred hhHHHHHH--hcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcC
Q 012492 336 TQMEKWMG--ACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFST 409 (462)
Q Consensus 336 ~~~~~l~~--~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~ 409 (462)
++. ++|+ ..++||+++|.+++.||+++|+|+|+.|..++| ..|+..+++.|.|+.++ +.+.+.++|.++| +
T Consensus 332 PQ~-~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ-~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~vl-~ 408 (500)
T PF00201_consen 332 PQN-DLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQ-PRNAARVEEKGVGVVLDKNDLTEEELRAAIREVL-E 408 (500)
T ss_dssp -HH-HHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTH-HHHHHHHHHTTSEEEEGGGC-SHHHHHHHHHHHH-H
T ss_pred cch-hhhhcccceeeeeccccchhhhhhhccCCccCCCCcccC-CccceEEEEEeeEEEEEecCCcHHHHHHHHHHHH-h
Confidence 864 7886 557899999999999999999999999987665 56999999999998775 4789999999999 7
Q ss_pred CHHHHHHHHHHHHhhcC-CcHH-HHHHHHHHHHHh
Q 012492 410 KTDELKRMSENALKLAQ-PEAV-VDIVKDIHDLAA 442 (462)
Q Consensus 410 d~~~~~~m~~~a~~~~~-~~~~-~~ia~~i~~l~~ 442 (462)
|+..+++..+-++.+.+ +..+ ++.+.++|-.++
T Consensus 409 ~~~y~~~a~~ls~~~~~~p~~p~~~~~~~ie~v~~ 443 (500)
T PF00201_consen 409 NPSYKENAKRLSSLFRDRPISPLERAVWWIEYVAR 443 (500)
T ss_dssp SHHHHHHHHHHHHTTT-------------------
T ss_pred hhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 88877777766655554 3444 566666665554
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.5e-09 Score=109.42 Aligned_cols=152 Identities=15% Similarity=0.201 Sum_probs=116.8
Q ss_pred CCCCccHHHHHHHHHHhhhcccCCCCCceEEEE-ccCCH----HHHHHHhhccCC-------------------------
Q 012492 277 GEGMGPVKETAMALGESLLDKETGRPIGQLIII-CGRNR----TLASTLQSEEWK------------------------- 326 (462)
Q Consensus 277 ~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv-~G~~~----~l~~~~~~~~~~------------------------- 326 (462)
++..+.+.+++.++++.+.+ .|++.+.+. .|... .+.+.++++++.
T Consensus 329 rL~ek~~~~~I~av~~~~~~----~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (519)
T TIGR03713 329 GLSDEELQQILQQLLQYILK----NPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEE 404 (519)
T ss_pred CCChHHHHHHHHHHHHHHhh----CCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhh
Confidence 45666777888887766554 588876532 23321 233344444333
Q ss_pred ----CCeEEeccch--hHHHHHHhcchheecC---ChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeCCHH
Q 012492 327 ----IPVKVRGFET--QMEKWMGACDCIITKA---GPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPK 397 (462)
Q Consensus 327 ----~~V~~~g~~~--~~~~l~~~aD~vV~~s---g~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~ 397 (462)
.+|.|.|+.. ++.+.|..+.++|..| |..+.+||++.|+|+| +.+ ...++.+...|+++++..
T Consensus 405 ~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~~~ieAiS~GiPqI--nyg------~~~~V~d~~NG~li~d~~ 476 (519)
T TIGR03713 405 QKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLYTQISGISAGIPQI--NKV------ETDYVEHNKNGYIIDDIS 476 (519)
T ss_pred cccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChHHHHHHHHcCCCee--ecC------CceeeEcCCCcEEeCCHH
Confidence 6899999987 9999999999999766 3339999999999999 322 222455556799999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Q 012492 398 ETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLA 441 (462)
Q Consensus 398 ~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~ 441 (462)
++++++..+| .+++.++++...+.+.+++++.++|++.|.+++
T Consensus 477 ~l~~al~~~L-~~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 477 ELLKALDYYL-DNLKNWNYSLAYSIKLIDDYSSENIIERLNELI 519 (519)
T ss_pred HHHHHHHHHH-hCHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhC
Confidence 9999999999 799999999999999999999999999998863
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.5e-08 Score=102.69 Aligned_cols=180 Identities=13% Similarity=0.063 Sum_probs=111.3
Q ss_pred CcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCC-
Q 012492 235 SQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRN- 313 (462)
Q Consensus 235 ~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~- 313 (462)
.++..+|..+... ......+++..+.|.-.+...+++++.|+...-...++. +++..|.. .+..++|+....
T Consensus 225 ~~v~~VGPL~~~~-~~~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~-ela~gL~~-----s~~pflwv~r~~~ 297 (453)
T PLN02764 225 KKVLLTGPVFPEP-DKTRELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQ-ELCLGMEL-----TGSPFLVAVKPPR 297 (453)
T ss_pred CcEEEeccCccCc-cccccchhHHHHHHhCCCCCceEEEeecccccCCHHHHH-HHHHHHHh-----CCCCeEEEEeCCC
Confidence 3688888543211 000012345566776666778999999998653333333 33333322 133456665531
Q ss_pred ---H---HHHHHHhhccCCCCeEEeccchhHHHHHHhc--chheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHH
Q 012492 314 ---R---TLASTLQSEEWKIPVKVRGFETQMEKWMGAC--DCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVV 385 (462)
Q Consensus 314 ---~---~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~a--D~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~ 385 (462)
. .+.+..++.-....+.+.+|.++. ++++.. ++||+++|.++++||+++|+|+|+.|...+| ..|++.++
T Consensus 298 ~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~-~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ-~~na~~l~ 375 (453)
T PLN02764 298 GSSTIQEALPEGFEERVKGRGVVWGGWVQQP-LILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQ-VLNTRLLS 375 (453)
T ss_pred CCcchhhhCCcchHhhhccCCcEEeCCCCHH-HHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccch-HHHHHHHH
Confidence 1 111111111113457777999764 788774 5699999999999999999999999986665 45999986
Q ss_pred H-CCceeeeC-------CHHHHHHHHHHHhcCCH-HHHHHHHHHHHhh
Q 012492 386 D-NGAGVFTR-------SPKETARIVTEWFSTKT-DELKRMSENALKL 424 (462)
Q Consensus 386 ~-~G~g~~~~-------~~~~la~~i~~ll~~d~-~~~~~m~~~a~~~ 424 (462)
+ .|+|+.+. +.+++.+++.++| +++ +..+++++++++.
T Consensus 376 ~~~g~gv~~~~~~~~~~~~e~i~~av~~vm-~~~~~~g~~~r~~a~~~ 422 (453)
T PLN02764 376 DELKVSVEVAREETGWFSKESLRDAINSVM-KRDSEIGNLVKKNHTKW 422 (453)
T ss_pred HHhceEEEeccccCCccCHHHHHHHHHHHh-cCCchhHHHHHHHHHHH
Confidence 4 68887641 5789999999999 453 4445555555443
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.2e-09 Score=92.62 Aligned_cols=123 Identities=26% Similarity=0.356 Sum_probs=74.7
Q ss_pred EEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHHHhcchhee
Q 012492 271 VLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIIT 350 (462)
Q Consensus 271 iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~ 350 (462)
++.+|+....+++..++.++++.+.++ .|++++.++ |...+ .++++ ...+|++.|+++++.++|+.||+++.
T Consensus 5 i~~~g~~~~~k~~~~li~~~~~~l~~~---~p~~~l~i~-G~~~~---~l~~~-~~~~v~~~g~~~e~~~~l~~~dv~l~ 76 (135)
T PF13692_consen 5 IGYLGRIRPDKGLEELIEAALERLKEK---HPDIELIII-GNGPD---ELKRL-RRPNVRFHGFVEELPEILAAADVGLI 76 (135)
T ss_dssp EE--S-SSGGGTHHHHHH-HHHHHHHH---STTEEEEEE-CESS----HHCCH-HHCTEEEE-S-HHHHHHHHC-SEEEE
T ss_pred ccccccccccccccchhhhHHHHHHHH---CcCEEEEEE-eCCHH---HHHHh-cCCCEEEcCCHHHHHHHHHhCCEEEE
Confidence 333443334456666666354666553 577876665 44432 24433 24599999999999999999999987
Q ss_pred cC-----ChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceee-eCCHHHHHHHHHHHh
Q 012492 351 KA-----GPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVF-TRSPKETARIVTEWF 407 (462)
Q Consensus 351 ~s-----g~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~-~~~~~~la~~i~~ll 407 (462)
+. .+++++|+|++|+|+|+++.. ...+....+.++. .+++++++++|.+++
T Consensus 77 p~~~~~~~~~k~~e~~~~G~pvi~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 77 PSRFNEGFPNKLLEAMAAGKPVIASDNG------AEGIVEEDGCGVLVANDPEELAEAIERLL 133 (135)
T ss_dssp -BSS-SCC-HHHHHHHCTT--EEEEHHH------CHCHS---SEEEE-TT-HHHHHHHHHHHH
T ss_pred EeeCCCcCcHHHHHHHHhCCCEEECCcc------hhhheeecCCeEEECCCHHHHHHHHHHHh
Confidence 64 268999999999999998861 1112333555554 457999999999998
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.5e-08 Score=99.75 Aligned_cols=154 Identities=23% Similarity=0.178 Sum_probs=100.9
Q ss_pred HHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH---------------H-HHHH
Q 012492 256 DNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR---------------T-LAST 319 (462)
Q Consensus 256 ~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~---------------~-l~~~ 319 (462)
++..+.+.-.+...+|+++.|+...-.. +.+.+++..|.. .+.+++|+++... + +.+.
T Consensus 262 ~~~~~wLd~~~~~svvyvsfGS~~~~~~-~~~~~la~~l~~-----~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~ 335 (481)
T PLN02554 262 SEILRWLDEQPPKSVVFLCFGSMGGFSE-EQAREIAIALER-----SGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEG 335 (481)
T ss_pred hHHHHHHhcCCCCcEEEEeccccccCCH-HHHHHHHHHHHH-----cCCCeEEEEcCCcccccccccccccchhhhCChH
Confidence 3455555444445688898888743222 244455555543 2346788775310 0 1111
Q ss_pred HhhccCCCCeEEeccchhHHHHH--HhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHH-HHHCCceeeeC--
Q 012492 320 LQSEEWKIPVKVRGFETQMEKWM--GACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPY-VVDNGAGVFTR-- 394 (462)
Q Consensus 320 ~~~~~~~~~V~~~g~~~~~~~l~--~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~-l~~~G~g~~~~-- 394 (462)
..+ ...+|+.+.+|.++. +++ .++.+||+++|.++++||+.+|+|+|+.|...+| ..|+.. +.+.|+|+.+.
T Consensus 336 ~~~-r~~~~g~v~~W~PQ~-~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ-~~Na~~~v~~~g~Gv~l~~~ 412 (481)
T PLN02554 336 FLD-RTKDIGKVIGWAPQV-AVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQ-KFNAFEMVEELGLAVEIRKY 412 (481)
T ss_pred HHH-HhccCceEEeeCCHH-HHhCCcccCcccccCccchHHHHHHcCCCEEecCccccc-hhhHHHHHHHhCceEEeecc
Confidence 111 023577778999764 788 6777899999999999999999999999986655 569954 66779887652
Q ss_pred -------------CHHHHHHHHHHHhcCCHHHHHHHH
Q 012492 395 -------------SPKETARIVTEWFSTKTDELKRMS 418 (462)
Q Consensus 395 -------------~~~~la~~i~~ll~~d~~~~~~m~ 418 (462)
+.+++.++|.++|.++++.|++..
T Consensus 413 ~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~ 449 (481)
T PLN02554 413 WRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVK 449 (481)
T ss_pred ccccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHH
Confidence 467899999999932666555433
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.2e-08 Score=101.02 Aligned_cols=179 Identities=21% Similarity=0.169 Sum_probs=110.7
Q ss_pred HHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHH--------HHHHHhhccCCC
Q 012492 256 DNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRT--------LASTLQSEEWKI 327 (462)
Q Consensus 256 ~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~--------l~~~~~~~~~~~ 327 (462)
+++.+.+.-.+.+.+|+++.|+...-.. +.+.+++..|.. .+..++|+.+.... +.+...+ ...+
T Consensus 268 ~~~~~wld~~~~~svvyvsfGS~~~~~~-~~~~ela~~l~~-----~~~~flw~~~~~~~~~~~~~~~lp~~~~e-r~~~ 340 (475)
T PLN02167 268 DRIMRWLDDQPESSVVFLCFGSLGSLPA-PQIKEIAQALEL-----VGCRFLWSIRTNPAEYASPYEPLPEGFMD-RVMG 340 (475)
T ss_pred HHHHHHHhcCCCCceEEEeecccccCCH-HHHHHHHHHHHh-----CCCcEEEEEecCcccccchhhhCChHHHH-Hhcc
Confidence 3455666555556688898888754322 234455555543 24568888764210 1111111 1123
Q ss_pred CeEEeccchhHHHHHHh--cchheecCChhhHHHHHHhCCCEEEecCCCCccccchHH-HHHCCceeeeC----------
Q 012492 328 PVKVRGFETQMEKWMGA--CDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPY-VVDNGAGVFTR---------- 394 (462)
Q Consensus 328 ~V~~~g~~~~~~~l~~~--aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~-l~~~G~g~~~~---------- 394 (462)
+..+.+|.++ ..+++. +++||+++|.++++||+++|+|+|+.|...+| ..|+.. +.+.|+|+.+.
T Consensus 341 rg~v~~w~PQ-~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ-~~na~~~~~~~g~g~~~~~~~~~~~~~~ 418 (475)
T PLN02167 341 RGLVCGWAPQ-VEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQ-QLNAFTMVKELGLAVELRLDYVSAYGEI 418 (475)
T ss_pred CeeeeccCCH-HHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccc-hhhHHHHHHHhCeeEEeecccccccCCc
Confidence 4467799865 478876 55799999999999999999999999987665 459876 55678887552
Q ss_pred -CHHHHHHHHHHHhcCCHHHHHH---HHHHHHhhcCC-c-HHHHHHHHHHHHHhc
Q 012492 395 -SPKETARIVTEWFSTKTDELKR---MSENALKLAQP-E-AVVDIVKDIHDLAAQ 443 (462)
Q Consensus 395 -~~~~la~~i~~ll~~d~~~~~~---m~~~a~~~~~~-~-~~~~ia~~i~~l~~~ 443 (462)
+.+++++++.++|.++.+.|++ +++.+++-..+ . +..++-+.+.++...
T Consensus 419 ~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i~~~ 473 (475)
T PLN02167 419 VKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDLLGD 473 (475)
T ss_pred ccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Confidence 4678999999999433233433 33344433333 2 334665555555443
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=98.95 E-value=7.8e-07 Score=90.76 Aligned_cols=193 Identities=12% Similarity=0.123 Sum_probs=121.9
Q ss_pred EEEcCCCCChhhhccc-C------ChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCC----ce
Q 012492 237 IRVFGLPIRPSFVRAV-I------SKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPI----GQ 305 (462)
Q Consensus 237 i~v~g~pv~~~~~~~~-~------~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~----~~ 305 (462)
|.+++++|++..+... . ..+.+|++++ ++++|+-+++....|++.+.+.++-+.|.+ +|+ +.
T Consensus 250 v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~---~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~----~Pe~~gkv~ 322 (487)
T TIGR02398 250 LGAHPVGTDPERIRSALAAASIREMMERIRSELA---GVKLILSAERVDYTKGILEKLNAYERLLER----RPELLGKVT 322 (487)
T ss_pred EEEEECEecHHHHHHHhcCchHHHHHHHHHHHcC---CceEEEEecccccccCHHHHHHHHHHHHHh----CccccCceE
Confidence 5667778887654321 1 1235677776 455555555555568888888777544443 565 35
Q ss_pred EEEEccCC----H---HHHHHHhh-----------ccCCCCeEEeccc--hhHHHHHHhcchheecCC----hhhHHHHH
Q 012492 306 LIIICGRN----R---TLASTLQS-----------EEWKIPVKVRGFE--TQMEKWMGACDCIITKAG----PGTIAEAL 361 (462)
Q Consensus 306 ~lvv~G~~----~---~l~~~~~~-----------~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg----~~t~~EAl 361 (462)
++.++.+. . ++++.+++ .++..-+.+.+.+ +++..+|+.||+++.+|- ..+..|++
T Consensus 323 Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyv 402 (487)
T TIGR02398 323 LVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYV 402 (487)
T ss_pred EEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHH
Confidence 55555442 1 23444443 1333334556775 688999999999988763 77889999
Q ss_pred HhCC----CEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHH
Q 012492 362 IRGL----PIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVK 435 (462)
Q Consensus 362 a~G~----PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~ 435 (462)
+|+. |+|++...+ .+..+ ..++.++ |+++++++|.+.|...++.|++-.++.++....+....=++
T Consensus 403 a~~~~~~GvLILSefaG-----aa~~l---~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~ 474 (487)
T TIGR02398 403 AAQGLLDGVLVLSEFAG-----AAVEL---KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWAD 474 (487)
T ss_pred hhhcCCCCCEEEecccc-----chhhc---CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHH
Confidence 9999 899988743 22233 2345554 79999999999996566666555556666676666555555
Q ss_pred HHHHHHhcc
Q 012492 436 DIHDLAAQR 444 (462)
Q Consensus 436 ~i~~l~~~~ 444 (462)
.+.+-+..+
T Consensus 475 ~fl~~l~~~ 483 (487)
T TIGR02398 475 EFLAAVSPQ 483 (487)
T ss_pred HHHHHhhhc
Confidence 554444443
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.5e-07 Score=91.27 Aligned_cols=211 Identities=17% Similarity=0.180 Sum_probs=135.8
Q ss_pred CcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCC--cEEEEEeCCCCCccHHHHHHHH
Q 012492 213 VNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPIL--PAVLLMGGGEGMGPVKETAMAL 290 (462)
Q Consensus 213 ~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~--~~iLv~gG~~~~~~~~~~l~~l 290 (462)
.+.++..+............. .++.+++++++....... ..++.++. ..++.+|.....++...++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~ 221 (381)
T COG0438 151 ADRVIAVSPALKELLEALGVP-NKIVVIPNGIDTEKFAPA--------RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAA 221 (381)
T ss_pred ccEEEECCHHHHHHHHHhCCC-CCceEecCCcCHHHcCcc--------ccCCCcccCceEEEEeeccChhcCHHHHHHHH
Confidence 566777777664444444432 367788888877654421 12233333 3555665533335565555544
Q ss_pred HHhhhcccCCCCCceEEEEccCCH----HHHHHHhhccCCCCeEEeccch--hHHHHHHhcchheecC----ChhhHHHH
Q 012492 291 GESLLDKETGRPIGQLIIICGRNR----TLASTLQSEEWKIPVKVRGFET--QMEKWMGACDCIITKA----GPGTIAEA 360 (462)
Q Consensus 291 ~~~l~~~~~~~~~~~~lvv~G~~~----~l~~~~~~~~~~~~V~~~g~~~--~~~~l~~~aD~vV~~s----g~~t~~EA 360 (462)
..+.+. .+++.+++ +|.+. .+....++++...++.+.|+.+ ++..+++.||+++.++ .+.+++||
T Consensus 222 -~~~~~~---~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea 296 (381)
T COG0438 222 -AKLKKR---GPDIKLVI-VGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEA 296 (381)
T ss_pred -HHhhhh---cCCeEEEE-EcCCCccHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHH
Confidence 455431 22244444 44443 2445555556678899999985 7888999999999884 36789999
Q ss_pred HHhCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc-CCcHHHHHHHHH
Q 012492 361 LIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLA-QPEAVVDIVKDI 437 (462)
Q Consensus 361 la~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~-~~~~~~~ia~~i 437 (462)
+++|+|+|+++.+... +.+.+.+.|+++. +.+++++++..++ ++++.++.+.+.+++.. ..++++++++.+
T Consensus 297 ~a~g~pvi~~~~~~~~-----e~~~~~~~g~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (381)
T COG0438 297 MAAGTPVIASDVGGIP-----EVVEDGETGLLVPPGDVEELADALEQLL-EDPELREELGEAARERVEEEFSWERIAEQL 370 (381)
T ss_pred HhcCCcEEECCCCChH-----HHhcCCCceEecCCCCHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999999999875322 2233332354443 4799999999999 67777888887444444 688999999888
Q ss_pred HHHHhc
Q 012492 438 HDLAAQ 443 (462)
Q Consensus 438 ~~l~~~ 443 (462)
.+++..
T Consensus 371 ~~~~~~ 376 (381)
T COG0438 371 LELYEE 376 (381)
T ss_pred HHHHHH
Confidence 877654
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.6e-06 Score=84.30 Aligned_cols=342 Identities=13% Similarity=0.086 Sum_probs=176.5
Q ss_pred CeEEEEec-C-CCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchh--h-HHHHHHHHhhhH---HHHHHhhc
Q 012492 63 KNVLILMS-D-TGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLND--M-ERSYKFMVKHVQ---LWKVAFHS 134 (462)
Q Consensus 63 ~kIli~~~-~-~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~--~-~~~y~~~~~~~~---l~~~~~~~ 134 (462)
|||+|.+. + -..|......++.+.|++..|+ .++.+.+..++.+.+.... + ...|...-+... +.+- ...
T Consensus 1 ~~i~i~G~~g~~N~GdeAil~~ii~~l~~~~p~-~~i~v~S~~P~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~ 78 (426)
T PRK10017 1 MKLLILGNHTCGNRGDSAILRGLLDAINILNPH-AEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGR-VKK 78 (426)
T ss_pred CeEEEEccccCCCccHHHHHHHHHHHHHhhCCC-CeEEEEecCccchhhhcccccccchhhhhhhhcccccccchh-HHH
Confidence 79999862 2 2259999999999999999875 4667666555433321110 0 011110000000 0000 000
Q ss_pred C-CcchhhHHHHH-------HHHHHHHHHHHHHHHhh-CCCEEEECCccc-----c---hHHHHHHHHcCCCCCCeEEEE
Q 012492 135 T-SPKWIHSCYLA-------AMAAYYAKEVEAGLMEY-KPDIIISVHPLM-----Q---HIPLWVLKWQGLQKKVIFVTV 197 (462)
Q Consensus 135 ~-~~~~~~~~~~~-------~~~~~~~~~l~~~l~~~-kPDvVi~~~~~~-----~---~~~~~~~~~~~~~~~iP~v~~ 197 (462)
. ..++.+..+.. ..+......+..+++.. +-|++|+.++.. + ...+..++. .+.|++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aDlvI~gGG~lfqD~y~~~~~~y~l~A~l----~gkpv~l~ 154 (426)
T PRK10017 79 VLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCAFM----AKKPLYMI 154 (426)
T ss_pred HHHhhhhHHHHHhhhccccccccccchhhHHHHHHHHHhCCEEEECCCCccccCcccHHHHHHHHHHH----cCCCEEEE
Confidence 0 00000000000 00000111222333333 369999877421 1 111223343 47898877
Q ss_pred ecCCCCCCc-------ccccCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccC--C--h-HHHHHHcCCC
Q 012492 198 ITDLNTCHP-------TWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVI--S--K-DNLRLELQMD 265 (462)
Q Consensus 198 ~~d~~~~~~-------~~~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~--~--~-~~~r~~l~l~ 265 (462)
-....+... .|+.+.+|.+.+-.+...+.+.+.|++..++.+++-|+ |.-+.. + + ..+...++..
T Consensus 155 gqsiGPf~~~~~r~l~r~vl~~~~~ItvRD~~S~~~Lk~lGv~~~~v~~~aDpA---F~L~~~~~~~~~~~~~~~~~~~~ 231 (426)
T PRK10017 155 GHSVGPFQDEQFNQLANYVFGHCDALILRESVSLDLMKRSNITTAKVEHGVDTA---WLVDHHTEDFTASYAVQHWLDVA 231 (426)
T ss_pred CCcCCCcCCHHHHHHHHHHHhcCCEEEEccHHHHHHHHHhCCCccceEEecChh---hhCCccccccccchhhhhhhccc
Confidence 776654433 23456789999988888888888899878888876443 221111 0 1 1112223333
Q ss_pred CCCcEEEEEeCCCC-C--------ccHHHHHHHHHHhhhcccCCCCCceEEEEc--------cCCHH-HHHHHhh-ccCC
Q 012492 266 PILPAVLLMGGGEG-M--------GPVKETAMALGESLLDKETGRPIGQLIIIC--------GRNRT-LASTLQS-EEWK 326 (462)
Q Consensus 266 ~~~~~iLv~gG~~~-~--------~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~--------G~~~~-l~~~~~~-~~~~ 326 (462)
.++++|.++...+. . ....+.+..+++.+.++ +.+++++. ++++. ..+.+.+ +...
T Consensus 232 ~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~-----g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~ 306 (426)
T PRK10017 232 AQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDE-----GYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDP 306 (426)
T ss_pred ccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHC-----CCeEEEEecccCccCCCCchHHHHHHHHHhcccc
Confidence 45567777766543 1 12334454555555432 34444333 23332 2223322 2222
Q ss_pred CCeEEe-c-c-chhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceee-eC----CHHH
Q 012492 327 IPVKVR-G-F-ETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVF-TR----SPKE 398 (462)
Q Consensus 327 ~~V~~~-g-~-~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~-~~----~~~~ 398 (462)
.+++++ + + ..++..+++.||++|+. .-..++=|++.|+|+|...+.+ ....++.+.|..-. ++ +++.
T Consensus 307 ~~~~vi~~~~~~~e~~~iIs~~dl~ig~-RlHa~I~a~~~gvP~i~i~Y~~----K~~~~~~~lg~~~~~~~~~~l~~~~ 381 (426)
T PRK10017 307 ARYHVVMDELNDLEMGKILGACELTVGT-RLHSAIISMNFGTPAIAINYEH----KSAGIMQQLGLPEMAIDIRHLLDGS 381 (426)
T ss_pred cceeEecCCCChHHHHHHHhhCCEEEEe-cchHHHHHHHcCCCEEEeeehH----HHHHHHHHcCCccEEechhhCCHHH
Confidence 333332 2 2 24677999999999985 3355788999999999998742 23345555665432 22 4678
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHh
Q 012492 399 TARIVTEWFSTKTDELKRMSENALK 423 (462)
Q Consensus 399 la~~i~~ll~~d~~~~~~m~~~a~~ 423 (462)
+.+.+.+++++.++.++++.++..+
T Consensus 382 Li~~v~~~~~~r~~~~~~l~~~v~~ 406 (426)
T PRK10017 382 LQAMVADTLGQLPALNARLAEAVSR 406 (426)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 8889999994334445555544433
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=98.92 E-value=7.5e-08 Score=98.10 Aligned_cols=189 Identities=12% Similarity=0.080 Sum_probs=116.6
Q ss_pred CCcEEEEcCHHHHHHH-HH---cCCCCCcEEEcCCCCC-hhhhcc-cCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHH
Q 012492 212 RVNRCYCPSKEVAKRA-SY---FGLEVSQIRVFGLPIR-PSFVRA-VISKDNLRLELQMDPILPAVLLMGGGEGMGPVKE 285 (462)
Q Consensus 212 ~~d~~i~~s~~~~~~l-~~---~gi~~~~i~v~g~pv~-~~~~~~-~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~ 285 (462)
.++.+++.|.+..+.- .+ ... ..++..+|.... +..... ..+.+...+.+.-.+.+.+|+++.|+...-.. +
T Consensus 203 ~~~~vlvNTf~eLE~~~~~~l~~~~-~~~v~~vGpl~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~-~ 280 (451)
T PLN02410 203 TASSVIINTASCLESSSLSRLQQQL-QIPVYPIGPLHLVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEI-N 280 (451)
T ss_pred cCCEEEEeChHHhhHHHHHHHHhcc-CCCEEEecccccccCCCccccccchHHHHHHHhCCCCcEEEEEccccccCCH-H
Confidence 3566777765444321 11 111 136777774321 110000 01111223445544556789999998764333 3
Q ss_pred HHHHHHHhhhcccCCCCCceEEEEccCCH----H----HHHHHhhccCCCCeEEeccchhHHHHHHhcc--hheecCChh
Q 012492 286 TAMALGESLLDKETGRPIGQLIIICGRNR----T----LASTLQSEEWKIPVKVRGFETQMEKWMGACD--CIITKAGPG 355 (462)
Q Consensus 286 ~l~~l~~~l~~~~~~~~~~~~lvv~G~~~----~----l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD--~vV~~sg~~ 355 (462)
.+.+++..|.. .+..|+|++..+. . +.+..++ ....|..+.+|.++ .++++..+ +||+++|.+
T Consensus 281 q~~ela~gLe~-----s~~~FlWv~r~~~~~~~~~~~~lp~~f~e-r~~~~g~v~~w~PQ-~~iL~h~~v~~fvtH~G~n 353 (451)
T PLN02410 281 EVMETASGLDS-----SNQQFLWVIRPGSVRGSEWIESLPKEFSK-IISGRGYIVKWAPQ-KEVLSHPAVGGFWSHCGWN 353 (451)
T ss_pred HHHHHHHHHHh-----cCCCeEEEEccCcccccchhhcCChhHHH-hccCCeEEEccCCH-HHHhCCCccCeeeecCchh
Confidence 34445555543 1236788776321 1 1212111 13357788899976 46888755 599999999
Q ss_pred hHHHHHHhCCCEEEecCCCCccccchHHHHHC-CceeeeC---CHHHHHHHHHHHhcCCH
Q 012492 356 TIAEALIRGLPIILNDYIPGQEKGNVPYVVDN-GAGVFTR---SPKETARIVTEWFSTKT 411 (462)
Q Consensus 356 t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~-G~g~~~~---~~~~la~~i~~ll~~d~ 411 (462)
+++||+++|+|+|+.|...+| ..|++.+++. |+|+.+. +.+++++++.++| .++
T Consensus 354 S~~Ea~~~GvP~l~~P~~~DQ-~~na~~~~~~~~~G~~~~~~~~~~~v~~av~~lm-~~~ 411 (451)
T PLN02410 354 STLESIGEGVPMICKPFSSDQ-KVNARYLECVWKIGIQVEGDLDRGAVERAVKRLM-VEE 411 (451)
T ss_pred HHHHHHHcCCCEEeccccccC-HHHHHHHHHHhCeeEEeCCcccHHHHHHHHHHHH-cCC
Confidence 999999999999999987665 5699998876 8887763 5789999999999 454
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.6e-08 Score=101.11 Aligned_cols=149 Identities=18% Similarity=0.177 Sum_probs=103.3
Q ss_pred HHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH----------H-HHHHHhhccCC
Q 012492 258 LRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR----------T-LASTLQSEEWK 326 (462)
Q Consensus 258 ~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~----------~-l~~~~~~~~~~ 326 (462)
..+.+.-.++..+|+|+.|+...-.. +.+.+++..|.. .+..|+|+..... . +.+..++.-..
T Consensus 260 c~~wLd~~~~~sVvyvsfGS~~~~~~-~q~~ela~gL~~-----s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~ 333 (451)
T PLN03004 260 CLNWLDSQPEKSVVFLCFGSLGLFSK-EQVIEIAVGLEK-----SGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTED 333 (451)
T ss_pred HHHHHHhCCCCceEEEEecccccCCH-HHHHHHHHHHHH-----CCCCEEEEEcCCccccccccchhhhCChHHHHhccC
Confidence 44555544456789999998854322 334445455543 1236888887421 0 11111111123
Q ss_pred CCeEEeccchhHHHHHHhcch--heecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHH-CCceeeeC-------CH
Q 012492 327 IPVKVRGFETQMEKWMGACDC--IITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVD-NGAGVFTR-------SP 396 (462)
Q Consensus 327 ~~V~~~g~~~~~~~l~~~aD~--vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~-~G~g~~~~-------~~ 396 (462)
.++.+.+|.++. ++++.+++ ||+++|.++++||+++|+|+|..|...+| ..|++.+++ .|+|+.+. +.
T Consensus 334 ~g~~v~~W~PQ~-~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ-~~na~~~~~~~g~g~~l~~~~~~~~~~ 411 (451)
T PLN03004 334 KGMVVKSWAPQV-PVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQ-RFNRVMIVDEIKIAISMNESETGFVSS 411 (451)
T ss_pred CcEEEEeeCCHH-HHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccc-hhhHHHHHHHhCceEEecCCcCCccCH
Confidence 678889999765 79999998 99999999999999999999999986665 559999975 59997763 57
Q ss_pred HHHHHHHHHHhcCCHHHHH
Q 012492 397 KETARIVTEWFSTKTDELK 415 (462)
Q Consensus 397 ~~la~~i~~ll~~d~~~~~ 415 (462)
+++++++.+++ .+++.|+
T Consensus 412 e~l~~av~~vm-~~~~~r~ 429 (451)
T PLN03004 412 TEVEKRVQEII-GECPVRE 429 (451)
T ss_pred HHHHHHHHHHh-cCHHHHH
Confidence 89999999999 5765443
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.4e-08 Score=100.76 Aligned_cols=152 Identities=16% Similarity=0.056 Sum_probs=103.1
Q ss_pred HHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH--HHHHHHhhccCCCCeEEeccchh
Q 012492 260 LELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR--TLASTLQSEEWKIPVKVRGFETQ 337 (462)
Q Consensus 260 ~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~--~l~~~~~~~~~~~~V~~~g~~~~ 337 (462)
+.+.-.+...+|+++.|+....--.+.+.+++..+... +..++|+...+. .+.+...+ ...+|+.+.+|.++
T Consensus 265 ~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~-----g~~fiW~~~~~~~~~l~~~~~~-~~~~~~~v~~w~PQ 338 (448)
T PLN02562 265 GWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEAS-----GRPFIWVLNPVWREGLPPGYVE-RVSKQGKVVSWAPQ 338 (448)
T ss_pred HHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHC-----CCCEEEEEcCCchhhCCHHHHH-HhccCEEEEecCCH
Confidence 44443333457888888864222234455555555431 236777765421 12221111 12467888899975
Q ss_pred HHHHHHhcc--hheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHH-CCceeeeC--CHHHHHHHHHHHhcCCHH
Q 012492 338 MEKWMGACD--CIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVD-NGAGVFTR--SPKETARIVTEWFSTKTD 412 (462)
Q Consensus 338 ~~~l~~~aD--~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~-~G~g~~~~--~~~~la~~i~~ll~~d~~ 412 (462)
.++++.++ +||+++|.++++||+.+|+|+|+.|...+| ..|++.+++ .|+|+.+. +.+++++++.++| .+++
T Consensus 339 -~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ-~~na~~~~~~~g~g~~~~~~~~~~l~~~v~~~l-~~~~ 415 (448)
T PLN02562 339 -LEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQ-FVNCAYIVDVWKIGVRISGFGQKEVEEGLRKVM-EDSG 415 (448)
T ss_pred -HHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccch-HHHHHHHHHHhCceeEeCCCCHHHHHHHHHHHh-CCHH
Confidence 47888766 699999999999999999999999987665 459999886 48887764 5789999999999 6877
Q ss_pred HHHHHHHH
Q 012492 413 ELKRMSEN 420 (462)
Q Consensus 413 ~~~~m~~~ 420 (462)
.+++..+.
T Consensus 416 ~r~~a~~l 423 (448)
T PLN02562 416 MGERLMKL 423 (448)
T ss_pred HHHHHHHH
Confidence 76654433
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=98.89 E-value=2e-07 Score=94.90 Aligned_cols=145 Identities=14% Similarity=0.180 Sum_probs=96.7
Q ss_pred HHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH--------H----H--HHHHhh
Q 012492 257 NLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR--------T----L--ASTLQS 322 (462)
Q Consensus 257 ~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~--------~----l--~~~~~~ 322 (462)
+..+.+.-.+.+.+|+++.|+...-. .+.+.+++..|... +..++|+..+.. . + .+...+
T Consensus 250 ~~~~wLd~~~~~sVvyvsfGS~~~l~-~~q~~ela~gL~~s-----~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e 323 (455)
T PLN02152 250 SYTLWLDSKTESSVIYVSFGTMVELS-KKQIEELARALIEG-----KRPFLWVITDKLNREAKIEGEEETEIEKIAGFRH 323 (455)
T ss_pred HHHHHhhCCCCCceEEEEecccccCC-HHHHHHHHHHHHHc-----CCCeEEEEecCcccccccccccccccccchhHHH
Confidence 45566655555678999988876322 22344454444431 236788775420 0 0 011111
Q ss_pred ccCCCCeEEeccchhHHHHHHhcc--hheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHH---CCceeee----
Q 012492 323 EEWKIPVKVRGFETQMEKWMGACD--CIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVD---NGAGVFT---- 393 (462)
Q Consensus 323 ~~~~~~V~~~g~~~~~~~l~~~aD--~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~---~G~g~~~---- 393 (462)
....+..+.+|.++. ++++.++ +||+++|.++++||+.+|+|+|+.|...+| ..|+..+++ .|.++..
T Consensus 324 -~~~~~g~v~~W~PQ~-~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ-~~na~~~~~~~~~G~~~~~~~~~ 400 (455)
T PLN02152 324 -ELEEVGMIVSWCSQI-EVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQ-PANAKLLEEIWKTGVRVRENSEG 400 (455)
T ss_pred -hccCCeEEEeeCCHH-HHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccc-hHHHHHHHHHhCceEEeecCcCC
Confidence 134577788999875 6888887 599999999999999999999999986665 559999987 3444432
Q ss_pred -CCHHHHHHHHHHHhcCCH
Q 012492 394 -RSPKETARIVTEWFSTKT 411 (462)
Q Consensus 394 -~~~~~la~~i~~ll~~d~ 411 (462)
-+.+++.+++.++| +++
T Consensus 401 ~~~~e~l~~av~~vm-~~~ 418 (455)
T PLN02152 401 LVERGEIRRCLEAVM-EEK 418 (455)
T ss_pred cCcHHHHHHHHHHHH-hhh
Confidence 15788999999999 454
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.3e-07 Score=96.45 Aligned_cols=195 Identities=15% Similarity=0.051 Sum_probs=118.6
Q ss_pred CcEEEEcCHHHHHHH-HHcC--CC-CCcEEEcCCCCChhhhccc----CChHHHHHHcCCCCCCcEEEEEeCCCCCccHH
Q 012492 213 VNRCYCPSKEVAKRA-SYFG--LE-VSQIRVFGLPIRPSFVRAV----ISKDNLRLELQMDPILPAVLLMGGGEGMGPVK 284 (462)
Q Consensus 213 ~d~~i~~s~~~~~~l-~~~g--i~-~~~i~v~g~pv~~~~~~~~----~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~ 284 (462)
++.+++.|....+.- .+.- -+ ..++..+|.-....-...+ .+.++..+.+.-.+...+|+++.|+...-. .
T Consensus 212 ~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~-~ 290 (468)
T PLN02207 212 ANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLR-G 290 (468)
T ss_pred CCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCC-H
Confidence 456777776655542 1110 01 1357777743321100000 112345566655455678999998876432 3
Q ss_pred HHHHHHHHhhhcccCCCCCceEEEEccCCH-----HHHHHHhhccCCCCeEEeccchhHHHHHHhcch--heecCChhhH
Q 012492 285 ETAMALGESLLDKETGRPIGQLIIICGRNR-----TLASTLQSEEWKIPVKVRGFETQMEKWMGACDC--IITKAGPGTI 357 (462)
Q Consensus 285 ~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~-----~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~--vV~~sg~~t~ 357 (462)
+.+.+++..|.. .+..++|++.... .+.+..++ ....+..+.+|.++. ++++...+ ||+++|.+++
T Consensus 291 ~q~~ela~~l~~-----~~~~flW~~r~~~~~~~~~lp~~f~e-r~~~~g~i~~W~PQ~-~IL~H~~vg~FvTH~GwnS~ 363 (468)
T PLN02207 291 PLVKEIAHGLEL-----CQYRFLWSLRTEEVTNDDLLPEGFLD-RVSGRGMICGWSPQV-EILAHKAVGGFVSHCGWNSI 363 (468)
T ss_pred HHHHHHHHHHHH-----CCCcEEEEEeCCCccccccCCHHHHh-hcCCCeEEEEeCCHH-HHhcccccceeeecCccccH
Confidence 334455555543 2346888876421 01111111 123567778999764 68877555 9999999999
Q ss_pred HHHHHhCCCEEEecCCCCccccchHHHHH-CCceeee-----------CCHHHHHHHHHHHhcC-CHHHHHH
Q 012492 358 AEALIRGLPIILNDYIPGQEKGNVPYVVD-NGAGVFT-----------RSPKETARIVTEWFST-KTDELKR 416 (462)
Q Consensus 358 ~EAla~G~PvI~~~~~~~~~~~n~~~l~~-~G~g~~~-----------~~~~~la~~i~~ll~~-d~~~~~~ 416 (462)
+||+++|+|+|..|...+| ..|+..+++ .|+|+-+ -+.+++.++|.++|.+ +++.|++
T Consensus 364 ~Eai~~GVP~l~~P~~~DQ-~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~~~~~~r~~ 434 (468)
T PLN02207 364 VESLWFGVPIVTWPMYAEQ-QLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKR 434 (468)
T ss_pred HHHHHcCCCEEecCccccc-hhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhcchHHHHHH
Confidence 9999999999999986665 559998877 7888733 1567999999999931 3444443
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.3e-07 Score=95.05 Aligned_cols=177 Identities=18% Similarity=0.124 Sum_probs=112.1
Q ss_pred HHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCC-----H---HHHHHHhhccCCCC
Q 012492 257 NLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRN-----R---TLASTLQSEEWKIP 328 (462)
Q Consensus 257 ~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~-----~---~l~~~~~~~~~~~~ 328 (462)
+..+.+.-.+...+|+++.|+...-.. +.+.+++..|.. .+..++|++... . .+.+...+ ....|
T Consensus 266 ~~~~wLd~~~~~sVvyvsfGS~~~~~~-~q~~ela~~l~~-----~~~~flW~~~~~~~~~~~~~~~lp~~~~~-~~~~~ 338 (480)
T PLN02555 266 DCIEWLDSKPPSSVVYISFGTVVYLKQ-EQIDEIAYGVLN-----SGVSFLWVMRPPHKDSGVEPHVLPEEFLE-KAGDK 338 (480)
T ss_pred hHHHHHhCCCCCceeEEEeccccCCCH-HHHHHHHHHHHh-----cCCeEEEEEecCcccccchhhcCChhhhh-hcCCc
Confidence 344555444444578888888654322 233344444432 234778876521 0 11111111 13457
Q ss_pred eEEeccchhHHHHH--HhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHC-CceeeeC---------CH
Q 012492 329 VKVRGFETQMEKWM--GACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDN-GAGVFTR---------SP 396 (462)
Q Consensus 329 V~~~g~~~~~~~l~--~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~-G~g~~~~---------~~ 396 (462)
+.+.+|.++ .+++ .++.+||+++|.++++||+.+|+|+|+.|...+| ..|+..+++. |.|+.+. +.
T Consensus 339 g~v~~W~PQ-~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ-~~Na~~~~~~~gvGv~l~~~~~~~~~v~~ 416 (480)
T PLN02555 339 GKIVQWCPQ-EKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQ-VTDAVYLVDVFKTGVRLCRGEAENKLITR 416 (480)
T ss_pred eEEEecCCH-HHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCcccc-HHHHHHHHHHhCceEEccCCccccCcCcH
Confidence 888899976 4678 5688899999999999999999999999987665 5599999887 9987762 36
Q ss_pred HHHHHHHHHHhcCCHH---HH---HHHHHHHHhhcCC-c-HHHHHHHHHHHHHhc
Q 012492 397 KETARIVTEWFSTKTD---EL---KRMSENALKLAQP-E-AVVDIVKDIHDLAAQ 443 (462)
Q Consensus 397 ~~la~~i~~ll~~d~~---~~---~~m~~~a~~~~~~-~-~~~~ia~~i~~l~~~ 443 (462)
+++.+++.+++ .+++ .| ++|++.+++-... . +..++.+.+.++.+.
T Consensus 417 ~~v~~~v~~vm-~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~ 470 (480)
T PLN02555 417 EEVAECLLEAT-VGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRK 470 (480)
T ss_pred HHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 78999999999 4432 22 2333334333332 2 445666666666544
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.5e-06 Score=78.95 Aligned_cols=197 Identities=18% Similarity=0.191 Sum_probs=107.8
Q ss_pred HhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccccCCCcEEEEcCHHHHHHHHHcCCCCCcEE-E
Q 012492 161 MEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIR-V 239 (462)
Q Consensus 161 ~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~-v 239 (462)
.+..||++|+.+.........+.++. .++.+|.+ .| |+.-++..|.++++-+.-.+..... ..+|. +
T Consensus 67 p~~~Pdl~I~aGrrta~l~~~lkk~~---~~~~vVqI-~~-----Prlp~~~fDlvivp~HD~~~~~s~~---~~Nilpi 134 (329)
T COG3660 67 PEQRPDLIITAGRRTAPLAFYLKKKF---GGIKVVQI-QD-----PRLPYNHFDLVIVPYHDWREELSDQ---GPNILPI 134 (329)
T ss_pred ccCCCceEEecccchhHHHHHHHHhc---CCceEEEe-eC-----CCCCcccceEEeccchhhhhhhhcc---CCceeec
Confidence 46679999999877655433343433 25555543 33 3333456799998887766553222 23443 3
Q ss_pred cC--CCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccH-HHHHHHHHHhhhcccCCCCCceEEEEccCCH--
Q 012492 240 FG--LPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPV-KETAMALGESLLDKETGRPIGQLIIICGRNR-- 314 (462)
Q Consensus 240 ~g--~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~-~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~-- 314 (462)
.| ++|.+.+..+ .++..+..+.++ ...+-+++||..+.-.. .+-...++..+.+.. .+..+.+++...+..
T Consensus 135 ~Gs~h~Vt~~~lAa--~~e~~~~~~p~~-rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l-~~~g~~~lisfSRRTp~ 210 (329)
T COG3660 135 NGSPHNVTSQRLAA--LREAFKHLLPLP-RQRVAVLVGGNNKAFVFQEDKAHQFASLLVKIL-ENQGGSFLISFSRRTPD 210 (329)
T ss_pred cCCCCcccHHHhhh--hHHHHHhhCCCC-CceEEEEecCCCCCCccCHHHHHHHHHHHHHHH-HhCCceEEEEeecCCcH
Confidence 34 4565555543 455554443332 33344567777665433 333333333332211 123466766555432
Q ss_pred HHHHHHhh-ccCCCCeEEecc---chhHHHHHHhcchheecCC-hhhHHHHHHhCCCEEEecCC
Q 012492 315 TLASTLQS-EEWKIPVKVRGF---ETQMEKWMGACDCIITKAG-PGTIAEALIRGLPIILNDYI 373 (462)
Q Consensus 315 ~l~~~~~~-~~~~~~V~~~g~---~~~~~~l~~~aD~vV~~sg-~~t~~EAla~G~PvI~~~~~ 373 (462)
...+.++. +.-..-+.+-+- -+...++|++||.+|+... -+.+.||++.|+||-+.-.+
T Consensus 211 ~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~TaDSinM~sEAasTgkPv~~~~~~ 274 (329)
T COG3660 211 TVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTADSINMCSEAASTGKPVFILEPP 274 (329)
T ss_pred HHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEecchhhhhHHHhccCCCeEEEecC
Confidence 34555554 221122222221 1356789999999887665 56689999999999887543
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.7e-07 Score=94.32 Aligned_cols=179 Identities=12% Similarity=0.046 Sum_probs=108.4
Q ss_pred HHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH---HHHHHHhhccCC-CCeEEec
Q 012492 258 LRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWK-IPVKVRG 333 (462)
Q Consensus 258 ~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~-~~V~~~g 333 (462)
.|+.||||++.. ++... ....|-..+.+...++.|+. .|+.++++..+... .+++.+++.|+. +++.|.+
T Consensus 275 ~R~~~gLp~d~v-vF~~f-n~~~KI~p~~l~~W~~IL~~----vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~ 348 (468)
T PF13844_consen 275 TRAQYGLPEDAV-VFGSF-NNLFKISPETLDLWARILKA----VPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSP 348 (468)
T ss_dssp ETGGGT--SSSE-EEEE--S-GGG--HHHHHHHHHHHHH----STTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE
T ss_pred CHHHcCCCCCce-EEEec-CccccCCHHHHHHHHHHHHh----CCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcC
Confidence 377899987753 22222 22334444555555555543 47776655444332 256666667754 7799988
Q ss_pred cc--hhHHHHHHhcchheec---CChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCce-eeeCCHHHHHHHHHHHh
Q 012492 334 FE--TQMEKWMGACDCIITK---AGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAG-VFTRSPKETARIVTEWF 407 (462)
Q Consensus 334 ~~--~~~~~l~~~aD~vV~~---sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g-~~~~~~~~la~~i~~ll 407 (462)
.. ++.-..++.+|+++=+ +|+.|.+||+.+|+|+|..+.........+..|...|+. ++..+.++..+...+|.
T Consensus 349 ~~~~~ehl~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~s~~eYv~~Av~La 428 (468)
T PF13844_consen 349 VAPREEHLRRYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIADSEEEYVEIAVRLA 428 (468)
T ss_dssp ---HHHHHHHGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-SSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCCCHHHHHHHHHHHh
Confidence 75 3444567889998832 468899999999999999986544445566778888874 56678999999999999
Q ss_pred cCCHHHHHHHHHHHHhhc---CCcHHHHHHHHHHHHHhc
Q 012492 408 STKTDELKRMSENALKLA---QPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 408 ~~d~~~~~~m~~~a~~~~---~~~~~~~ia~~i~~l~~~ 443 (462)
+|++.+++++++.++.. .-+.....++.+++.+++
T Consensus 429 -~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 429 -TDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp -H-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 79999999998876543 236778888888887653
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=98.73 E-value=9.5e-07 Score=89.96 Aligned_cols=186 Identities=15% Similarity=0.143 Sum_probs=113.5
Q ss_pred CCcEEEEcCHHHHHH-----HHHc-CCC---CCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCcc
Q 012492 212 RVNRCYCPSKEVAKR-----ASYF-GLE---VSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGP 282 (462)
Q Consensus 212 ~~d~~i~~s~~~~~~-----l~~~-gi~---~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~ 282 (462)
.++.+++.|.+..+. +.+. +.. ..++..+|.-+..... . .+.++..+.+.-.+...+|+++.|+...-.
T Consensus 204 ~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~~~-~-~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~ 281 (470)
T PLN03015 204 MSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTNVH-V-EKRNSIFEWLDKQGERSVVYVCLGSGGTLT 281 (470)
T ss_pred cCCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCCCccc-c-cchHHHHHHHHhCCCCCEEEEECCcCCcCC
Confidence 456677777554443 2111 110 1347788854422111 1 122345566655555678999999986433
Q ss_pred HHHHHHHHHHhhhcccCCCCCceEEEEccCC-----------HHHH----HHHhhccCCCCeEEeccchhHHHHHHhcc-
Q 012492 283 VKETAMALGESLLDKETGRPIGQLIIICGRN-----------RTLA----STLQSEEWKIPVKVRGFETQMEKWMGACD- 346 (462)
Q Consensus 283 ~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~-----------~~l~----~~~~~~~~~~~V~~~g~~~~~~~l~~~aD- 346 (462)
. +.+.+++..|.. .+..|+|+.... .... +...+.-....+.+.+|.++. ++++...
T Consensus 282 ~-~q~~ela~gl~~-----s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~-~vL~h~~v 354 (470)
T PLN03015 282 F-EQTVELAWGLEL-----SGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQV-EILSHRSI 354 (470)
T ss_pred H-HHHHHHHHHHHh-----CCCcEEEEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHH-HHhccCcc
Confidence 3 334455555543 123678887421 0011 111110011236677999775 6777755
Q ss_pred -hheecCChhhHHHHHHhCCCEEEecCCCCccccchHHH-HHCCceeeeC--------CHHHHHHHHHHHh
Q 012492 347 -CIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYV-VDNGAGVFTR--------SPKETARIVTEWF 407 (462)
Q Consensus 347 -~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l-~~~G~g~~~~--------~~~~la~~i~~ll 407 (462)
+||+++|.++++||+++|+|+|..|...+| ..|+..+ ...|+|+.+. ..+++.++|+++|
T Consensus 355 g~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ-~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm 424 (470)
T PLN03015 355 GGFLSHCGWSSVLESLTKGVPIVAWPLYAEQ-WMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIV 424 (470)
T ss_pred CeEEecCCchhHHHHHHcCCCEEecccccch-HHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHH
Confidence 499999999999999999999999986665 4599988 4568887662 4678899999999
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.2e-06 Score=85.17 Aligned_cols=272 Identities=16% Similarity=0.084 Sum_probs=156.1
Q ss_pred hCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC----C--------Ccccc------------------cCC
Q 012492 163 YKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT----C--------HPTWF------------------HPR 212 (462)
Q Consensus 163 ~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~----~--------~~~~~------------------~~~ 212 (462)
++||||+++.-....++............+|.|..+|...- . .+.+. -..
T Consensus 129 ~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ 208 (487)
T COG0297 129 WLPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYY 208 (487)
T ss_pred CCCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhhee
Confidence 57999999875554444333321101248899888875431 0 01010 023
Q ss_pred CcEEEEcCHHHHHHHHH--c--CCC------CCcEEEcCCCCChhhhcccC------------------ChHHHHHHcCC
Q 012492 213 VNRCYCPSKEVAKRASY--F--GLE------VSQIRVFGLPIRPSFVRAVI------------------SKDNLRLELQM 264 (462)
Q Consensus 213 ~d~~i~~s~~~~~~l~~--~--gi~------~~~i~v~g~pv~~~~~~~~~------------------~~~~~r~~l~l 264 (462)
+|.+.++|+...+.+.. . |+. ..++.-+-|+++..+..+.. .+..+.+++++
T Consensus 209 ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL 288 (487)
T COG0297 209 ADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGL 288 (487)
T ss_pred ccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCC
Confidence 67888888887777651 1 111 13445455666555443311 22356677888
Q ss_pred CC--CCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH-HHHHHHhhc--cCCCCeEE-eccchhH
Q 012492 265 DP--ILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR-TLASTLQSE--EWKIPVKV-RGFETQM 338 (462)
Q Consensus 265 ~~--~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~-~l~~~~~~~--~~~~~V~~-~g~~~~~ 338 (462)
+. +.|++.++++...+|++.-++. ++..+.+. .+++++ .|.++ .++..+..+ ....++.+ .++.+.+
T Consensus 289 ~~~~~~pl~~~vsRl~~QKG~dl~~~-~i~~~l~~-----~~~~vi-lG~gd~~le~~~~~la~~~~~~~~~~i~~~~~l 361 (487)
T COG0297 289 DVDLPGPLFGFVSRLTAQKGLDLLLE-AIDELLEQ-----GWQLVL-LGTGDPELEEALRALASRHPGRVLVVIGYDEPL 361 (487)
T ss_pred CCCCCCcEEEEeeccccccchhHHHH-HHHHHHHh-----CceEEE-EecCcHHHHHHHHHHHHhcCceEEEEeeecHHH
Confidence 73 4566666665555555444444 44444431 366554 45543 344444433 12234544 5666555
Q ss_pred H-HHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCcccc---chHHHHHCCceeee--CCHHHHHHHHHHHhc
Q 012492 339 E-KWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKG---NVPYVVDNGAGVFT--RSPKETARIVTEWFS 408 (462)
Q Consensus 339 ~-~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~---n~~~l~~~G~g~~~--~~~~~la~~i~~ll~ 408 (462)
. .+++.||+++.||. |.|-++||..|++.|+.+.++-..+. |.......|.|+.. .++++++.++.+.+.
T Consensus 362 a~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~ 441 (487)
T COG0297 362 AHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALV 441 (487)
T ss_pred HHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHH
Confidence 4 78899999999985 89999999999999998876421110 10101224566654 468888888876542
Q ss_pred --CCHHH-HHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 409 --TKTDE-LKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 409 --~d~~~-~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
.+++. .+.+..++.. ..++|+.-|+...++.+.
T Consensus 442 ~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~lY~~ 477 (487)
T COG0297 442 LYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVELYKP 477 (487)
T ss_pred HhhCCHHHHHHHHHhhcc--cccCchhHHHHHHHHHHH
Confidence 33333 6666666544 577888888877776654
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.7e-07 Score=90.60 Aligned_cols=220 Identities=15% Similarity=0.126 Sum_probs=121.2
Q ss_pred cCCCcEEEEcCHHHHHHHHH-cCCCCCcEEEcCCCCChhhhcccCC-hHHHHHHcCCCCCCcEEEEEeCCCCCccH----
Q 012492 210 HPRVNRCYCPSKEVAKRASY-FGLEVSQIRVFGLPIRPSFVRAVIS-KDNLRLELQMDPILPAVLLMGGGEGMGPV---- 283 (462)
Q Consensus 210 ~~~~d~~i~~s~~~~~~l~~-~gi~~~~i~v~g~pv~~~~~~~~~~-~~~~r~~l~l~~~~~~iLv~gG~~~~~~~---- 283 (462)
....|.+++.|+...+.+.+ .+++.+++.++|.|-...+...... ++.+++.++++.++++||.+..-.+....
T Consensus 132 ~~~~d~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~ 211 (369)
T PF04464_consen 132 YRNYDYFIVSSEFEKEIFKKAFGYPEDKILVTGYPRNDYLFNKSKENRNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFK 211 (369)
T ss_dssp HTT-SEEEESSHHHHHHHHHHTT--GGGEEES--GGGHHHHHSTT-HHHHHHHHTT--SS-EEEEEE----GGG--GGSS
T ss_pred ccCCcEEEECCHHHHHHHHHHhccCcceEEEeCCCeEhHHhccCHHHHHHHHHHhccCCCCcEEEEeecccccccccccc
Confidence 45678999999999888876 4888889999999977666654222 45788889999888888887532221111
Q ss_pred --H--HHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhh-ccCCCCeEEeccchhHHHHHHhcchheecCChhhHH
Q 012492 284 --K--ETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQS-EEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIA 358 (462)
Q Consensus 284 --~--~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~-~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~ 358 (462)
. -....+. .+. .+++.++ .-..+........ .....+|.++...+++.++|..||++|+-- +.++.
T Consensus 212 ~~~~~~~~~~l~-~~~-----~~~~~li--~k~Hp~~~~~~~~~~~~~~~i~~~~~~~~~~~ll~~aDiLITDy-SSi~f 282 (369)
T PF04464_consen 212 FFFSDLDFEKLN-FLL-----KNNYVLI--IKPHPNMKKKFKDFKEDNSNIIFVSDNEDIYDLLAAADILITDY-SSIIF 282 (369)
T ss_dssp ----TT-HHHHH-HHH-----TTTEEEE--E--SHHHHTT----TT-TTTEEE-TT-S-HHHHHHT-SEEEESS--THHH
T ss_pred ccccccCHHHHH-HHh-----CCCcEEE--EEeCchhhhchhhhhccCCcEEECCCCCCHHHHHHhcCEEEEec-hhHHH
Confidence 0 1122232 222 2355433 3333322222222 234567888776678999999999999964 45889
Q ss_pred HHHHhCCCEEEecCCCC---ccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHH----HHHHHHHHHHhhcCCcHHH
Q 012492 359 EALIRGLPIILNDYIPG---QEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTD----ELKRMSENALKLAQPEAVV 431 (462)
Q Consensus 359 EAla~G~PvI~~~~~~~---~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~----~~~~m~~~a~~~~~~~~~~ 431 (462)
|++.+++|+|.....-. ++.+-...+.+...|..+.+.+++.++|..++. ++. .+++..++--.+.+..+++
T Consensus 283 D~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~~~~~eL~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~Dg~s~e 361 (369)
T PF04464_consen 283 DFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIVYNFEELIEAIENIIE-NPDEYKEKREKFRDKFFKYNDGNSSE 361 (369)
T ss_dssp HHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EESSHHHHHHHHTTHHH-HHHHTHHHHHHHHHHHSTT--S-HHH
T ss_pred HHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCceeCCHHHHHHHHHhhhh-CCHHHHHHHHHHHHHhCCCCCchHHH
Confidence 99999999998765321 111111123344567788899999999998873 332 2334444444445678999
Q ss_pred HHHHHHHH
Q 012492 432 DIVKDIHD 439 (462)
Q Consensus 432 ~ia~~i~~ 439 (462)
+|++.|.+
T Consensus 362 ri~~~I~k 369 (369)
T PF04464_consen 362 RIVNYIFK 369 (369)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhC
Confidence 99998874
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=98.70 E-value=7.1e-08 Score=85.01 Aligned_cols=149 Identities=15% Similarity=0.104 Sum_probs=81.0
Q ss_pred CchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhHHHHHHHHHHH
Q 012492 73 GGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYY 152 (462)
Q Consensus 73 G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (462)
.||..+.+..|+++|.++|+ ++.+...... ........ ... ............ .....
T Consensus 11 ~GG~e~~~~~l~~~l~~~G~---~v~v~~~~~~-~~~~~~~~-~~~----------~~~~~~~~~~~~-------~~~~~ 68 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRGH---EVTVVSPGVK-DPIEEELV-KIF----------VKIPYPIRKRFL-------RSFFF 68 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT----EEEEEESS-T-TS-SSTEE-EE-------------TT-SSTSS---------HHHHH
T ss_pred CChHHHHHHHHHHHHHHCCC---EEEEEEcCCC-ccchhhcc-cee----------eeeecccccccc-------hhHHH
Confidence 36999999999999999985 4454422110 00000000 000 000000000011 12344
Q ss_pred HHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC-------CC----------cccccCCCcE
Q 012492 153 AKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT-------CH----------PTWFHPRVNR 215 (462)
Q Consensus 153 ~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~-------~~----------~~~~~~~~d~ 215 (462)
...+.+.+++.+||+|+++............+ ++|++...|+... .. ..++.+.+|.
T Consensus 69 ~~~~~~~i~~~~~DiVh~~~~~~~~~~~~~~~------~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (177)
T PF13439_consen 69 MRRLRRLIKKEKPDIVHIHGPPAFWIALLACR------KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADR 142 (177)
T ss_dssp HHHHHHHHHHHT-SEEECCTTHCCCHHHHHHH------CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSE
T ss_pred HHHHHHHHHHcCCCeEEecccchhHHHHHhcc------CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCE
Confidence 56777889999999998877654443222222 6898888776430 00 1123467899
Q ss_pred EEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhh
Q 012492 216 CYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFV 249 (462)
Q Consensus 216 ~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~ 249 (462)
++|+|+..++.+.+.|++++++.+++|+++.+.+
T Consensus 143 ii~vS~~~~~~l~~~~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 143 IIAVSESTKDELIKFGIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp EEESSHHHHHHHHHHT--SS-EEE----B-CCCH
T ss_pred EEEECHHHHHHHHHhCCcccCCEEEECCccHHHc
Confidence 9999999999999989999999999999987654
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.4e-06 Score=88.27 Aligned_cols=188 Identities=13% Similarity=0.082 Sum_probs=114.4
Q ss_pred CCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHH
Q 012492 211 PRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMAL 290 (462)
Q Consensus 211 ~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l 290 (462)
...|.++++++...+.+..+.-+..++.+++-+.--.+ .++. .....+++++ . .+.++.+
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~~~~~~~ip~g~i~~~-----~~~~--------r~~~~~l~~t----~---s~~I~~i 297 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDNEYQEQISQLGYLYPF-----KKDN--------KYRKQALILT----N---SDQIEHL 297 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCcccCceEEEEEEEEee-----cccc--------CCcccEEEEC----C---HHHHHHH
Confidence 45688999998877766654222334443332222111 0100 1112344444 1 3334433
Q ss_pred HHhhhcccCCCCCceEEEEccCC--HHHHHHHhhccCCCCeEEeccch-hHHHHHHhcchheecC----ChhhHHHHHHh
Q 012492 291 GESLLDKETGRPIGQLIIICGRN--RTLASTLQSEEWKIPVKVRGFET-QMEKWMGACDCIITKA----GPGTIAEALIR 363 (462)
Q Consensus 291 ~~~l~~~~~~~~~~~~lvv~G~~--~~l~~~~~~~~~~~~V~~~g~~~-~~~~l~~~aD~vV~~s----g~~t~~EAla~ 363 (462)
...+.+ .|++++-+..|.. .++.+. +++ +.-+.+.|+.. ++.++|..||+++..+ .++++.||+..
T Consensus 298 ~~Lv~~----lPd~~f~Iga~te~s~kL~~L-~~y--~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~ 370 (438)
T TIGR02919 298 EEIVQA----LPDYHFHIAALTEMSSKLMSL-DKY--DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEY 370 (438)
T ss_pred HHHHHh----CCCcEEEEEecCcccHHHHHH-Hhc--CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHc
Confidence 322221 4788876655555 334333 443 34455677776 9999999999988644 28999999999
Q ss_pred CCCEEEecCCCCccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHH
Q 012492 364 GLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVV 431 (462)
Q Consensus 364 G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~ 431 (462)
|+|+++.+...+... ++..|..+...++++++++|.++| .+++..++.-..-++.+..-+.+
T Consensus 371 G~pI~afd~t~~~~~-----~i~~g~l~~~~~~~~m~~~i~~lL-~d~~~~~~~~~~q~~~a~~~~~~ 432 (438)
T TIGR02919 371 NLLILGFEETAHNRD-----FIASENIFEHNEVDQLISKLKDLL-NDPNQFRELLEQQREHANDISKE 432 (438)
T ss_pred CCcEEEEecccCCcc-----cccCCceecCCCHHHHHHHHHHHh-cCHHHHHHHHHHHHHHhccCCHH
Confidence 999999998644322 333365566678999999999999 78877666555555655544444
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.3e-06 Score=80.28 Aligned_cols=192 Identities=18% Similarity=0.187 Sum_probs=107.5
Q ss_pred HHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccccCCCcEEEEcCHHHHHHHHHcCC-CCCcE
Q 012492 159 GLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGL-EVSQI 237 (462)
Q Consensus 159 ~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~~~~d~~i~~s~~~~~~l~~~gi-~~~~i 237 (462)
.+..-.||+||+.+.......+++.+..+ .+.++|.+. .|.......|.++++.+. +. +..++
T Consensus 52 ~~~~~~pdLiIsaGr~t~~~~~~l~r~~g--g~~~~V~i~------~P~~~~~~FDlvi~p~HD--------~~~~~~Nv 115 (311)
T PF06258_consen 52 ALEPPWPDLIISAGRRTAPAALALRRASG--GRTKTVQIM------DPRLPPRPFDLVIVPEHD--------RLPRGPNV 115 (311)
T ss_pred cccCCCCcEEEECCCchHHHHHHHHHHcC--CCceEEEEc------CCCCCccccCEEEECccc--------CcCCCCce
Confidence 35566799999999876655444444432 245666543 333445667999988765 33 23555
Q ss_pred EEc-C--CCCChhhhcccCChHHHHHHcCCCCCCcEE-EEEeCCCCCcc-H----HHHHHHHHHhhhcccCCCCCceEEE
Q 012492 238 RVF-G--LPIRPSFVRAVISKDNLRLELQMDPILPAV-LLMGGGEGMGP-V----KETAMALGESLLDKETGRPIGQLII 308 (462)
Q Consensus 238 ~v~-g--~pv~~~~~~~~~~~~~~r~~l~l~~~~~~i-Lv~gG~~~~~~-~----~~~l~~l~~~l~~~~~~~~~~~~lv 308 (462)
..+ | |++.++-... .+.+...++.-.+ ++.+ +++||..+... . .+++..+.+.+.+ . +..+++
T Consensus 116 l~t~ga~~~i~~~~l~~--a~~~~~~~~~~l~-~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~----~-~~~~~v 187 (311)
T PF06258_consen 116 LPTLGAPNRITPERLAE--AAAAWAPRLAALP-RPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAA----Y-GGSLLV 187 (311)
T ss_pred EecccCCCcCCHHHHHH--HHHhhhhhhccCC-CCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHh----C-CCeEEE
Confidence 443 2 4444443221 2233333344222 3444 45666544322 1 2344444333322 2 245666
Q ss_pred EccCC--HHHHHHHhhc-cCCCCeEEeccc--hhHHHHHHhcchheecCC-hhhHHHHHHhCCCEEEecCCC
Q 012492 309 ICGRN--RTLASTLQSE-EWKIPVKVRGFE--TQMEKWMGACDCIITKAG-PGTIAEALIRGLPIILNDYIP 374 (462)
Q Consensus 309 v~G~~--~~l~~~~~~~-~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg-~~t~~EAla~G~PvI~~~~~~ 374 (462)
...+. .+..+.++++ +....+.+..-. +.+..+|+.||.++.... -+++.||++.|+||.+.+...
T Consensus 188 ttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 188 TTSRRTPPEAEAALRELLKDNPGVYIWDGTGENPYLGFLAAADAIVVTEDSVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred EcCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcHHHHHHhCCEEEEcCccHHHHHHHHHcCCCEEEecCCC
Confidence 55543 2344555443 234556444332 468899999999877654 567899999999999998764
|
The function of this family is unknown. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.63 E-value=4.2e-05 Score=77.16 Aligned_cols=268 Identities=11% Similarity=0.032 Sum_probs=150.1
Q ss_pred HHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCC--CCCcccccCCCcEEEEcCHHHHHHHHHc--C
Q 012492 156 VEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLN--TCHPTWFHPRVNRCYCPSKEVAKRASYF--G 231 (462)
Q Consensus 156 l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~--~~~~~~~~~~~d~~i~~s~~~~~~l~~~--g 231 (462)
+...++.-..|+.|-..+.+......+... ...|+...-..+. ...+..=+-..|.++++ ++...++.+. .
T Consensus 327 ~a~~I~~d~IdILvDl~g~T~d~r~~v~A~----RpAPiqvswlGy~aT~g~p~~DY~I~D~y~vP-p~ae~yysEkl~R 401 (620)
T COG3914 327 IANAIRTDGIDILVDLDGHTVDTRCQVFAH----RPAPIQVSWLGYPATTGSPNMDYFISDPYTVP-PTAEEYYSEKLWR 401 (620)
T ss_pred HHHHHHhcCCeEEEeccCceeccchhhhhc----CCCceEEeecccccccCCCcceEEeeCceecC-chHHHHHHHHHHh
Confidence 345688999999987666544332222221 2456542211111 01111112234555555 5555555442 2
Q ss_pred CCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEcc
Q 012492 232 LEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICG 311 (462)
Q Consensus 232 i~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G 311 (462)
+| -+..|++....-. ++ --|..+||+++.. |++. +....|...+.+....+.|+. -|+-.+++..|
T Consensus 402 Lp-----~cy~p~d~~~~v~-p~--~sR~~lglp~~av-Vf~c-~~n~~K~~pev~~~wmqIL~~----vP~Svl~L~~~ 467 (620)
T COG3914 402 LP-----QCYQPVDGFEPVT-PP--PSRAQLGLPEDAV-VFCC-FNNYFKITPEVFALWMQILSA----VPNSVLLLKAG 467 (620)
T ss_pred cc-----cccCCCCCcccCC-CC--cchhhcCCCCCeE-EEEe-cCCcccCCHHHHHHHHHHHHh----CCCcEEEEecC
Confidence 33 2333443321111 11 1245689987653 3333 333455566666655555554 46755544444
Q ss_pred C-CHHH----HHHHhhccC-CCCeEEeccc--hhHHHHHHhcchhee--c-CChhhHHHHHHhCCCEEEecCCCCccccc
Q 012492 312 R-NRTL----ASTLQSEEW-KIPVKVRGFE--TQMEKWMGACDCIIT--K-AGPGTIAEALIRGLPIILNDYIPGQEKGN 380 (462)
Q Consensus 312 ~-~~~l----~~~~~~~~~-~~~V~~~g~~--~~~~~l~~~aD~vV~--~-sg~~t~~EAla~G~PvI~~~~~~~~~~~n 380 (462)
+ +++. ++..++.|. ..++.|.+.. +++.+.|..||+|+= | +|+.|.+|++-+|+|||...-..--..-.
T Consensus 468 ~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~~G~~FasR~~ 547 (620)
T COG3914 468 GDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLVLDTYPYGGHTTASDALWMGVPVLTRVGEQFASRNG 547 (620)
T ss_pred CCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhheeeecccCCCccchHHHHHhcCceeeeccHHHHHhhh
Confidence 3 3333 444444454 4788998876 678899999999983 2 35788999999999999875321111212
Q ss_pred hHHHHHCCc-eeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc---CCcHHHHHHHHHHHHHhc
Q 012492 381 VPYVVDNGA-GVFTRSPKETARIVTEWFSTKTDELKRMSENALKLA---QPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 381 ~~~l~~~G~-g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~---~~~~~~~ia~~i~~l~~~ 443 (462)
...+...|. -.++.+.++..++-.++= .|...+++.+...++-. .-+.....++.++.++.+
T Consensus 548 ~si~~~agi~e~vA~s~~dYV~~av~~g-~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~ 613 (620)
T COG3914 548 ASIATNAGIPELVADSRADYVEKAVAFG-SDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWG 613 (620)
T ss_pred HHHHHhcCCchhhcCCHHHHHHHHHHhc-ccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHH
Confidence 334555665 345567788887777766 57767766665443322 246778888888887754
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=9.6e-06 Score=88.42 Aligned_cols=274 Identities=11% Similarity=0.096 Sum_probs=155.8
Q ss_pred HHHHHHHHHHHHHHhhCC-CEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccc-----------cCCCcE
Q 012492 148 MAAYYAKEVEAGLMEYKP-DIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWF-----------HPRVNR 215 (462)
Q Consensus 148 ~~~~~~~~l~~~l~~~kP-DvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~-----------~~~~d~ 215 (462)
.+..++.++ ++.++| |+|-++.......|.. .|.+. ++.++-.++|-..+....|. .-.+|.
T Consensus 217 vN~~FA~~i---~~~~~~gD~VWVHDYHL~LlP~~-LR~~~--p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDl 290 (934)
T PLN03064 217 ANQMFADVV---NEHYEEGDVVWCHDYHLMFLPKC-LKEYN--SNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADL 290 (934)
T ss_pred HHHHHHHHH---HHhcCCCCEEEEecchhhHHHHH-HHHhC--CCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCe
Confidence 344555554 455566 5776666555554433 34332 45666556664432111110 124677
Q ss_pred EEEcCHHHHHHHHH-----cCCCC--------C---cEEEcCCCCChhhhccc-CC------hHHHHHHcCCCCCCcEEE
Q 012492 216 CYCPSKEVAKRASY-----FGLEV--------S---QIRVFGLPIRPSFVRAV-IS------KDNLRLELQMDPILPAVL 272 (462)
Q Consensus 216 ~i~~s~~~~~~l~~-----~gi~~--------~---~i~v~g~pv~~~~~~~~-~~------~~~~r~~l~l~~~~~~iL 272 (462)
+-..+....+.+.. .|+.. . +|.+.+.+|++..+... .. .++++++++ ++++|+
T Consensus 291 IGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~---g~kiIl 367 (934)
T PLN03064 291 VGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFA---GRKVML 367 (934)
T ss_pred EEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhC---CceEEE
Confidence 77777766655532 23221 1 24455667777654421 11 135666664 445555
Q ss_pred EEeCCCCCccHHHHHHHHHHhhhcccCCCCCce--EEE--Ec----cCCHH---HHHHHhhc--------cC--CCCeEE
Q 012492 273 LMGGGEGMGPVKETAMALGESLLDKETGRPIGQ--LII--IC----GRNRT---LASTLQSE--------EW--KIPVKV 331 (462)
Q Consensus 273 v~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~--~lv--v~----G~~~~---l~~~~~~~--------~~--~~~V~~ 331 (462)
-+++....|++.+.+.++...|.+ +|+++ +++ ++ +...+ +++.+.++ +. ...|++
T Consensus 368 gVDRLD~~KGI~~kL~AfE~fL~~----~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~ 443 (934)
T PLN03064 368 GVDRLDMIKGIPQKILAFEKFLEE----NPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHH 443 (934)
T ss_pred EeeccccccCHHHHHHHHHHHHHh----CccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEE
Confidence 455555567888777776444443 56653 222 22 22222 33334321 11 122444
Q ss_pred ecc-c--hhHHHHHHhcchheecC---C-hhhHHHHHHhCC----CEEEecCCCCccccchHHHHHCCceeeeC--CHHH
Q 012492 332 RGF-E--TQMEKWMGACDCIITKA---G-PGTIAEALIRGL----PIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKE 398 (462)
Q Consensus 332 ~g~-~--~~~~~l~~~aD~vV~~s---g-~~t~~EAla~G~----PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~ 398 (462)
+.. + +++..+|+.||+++.+| | +.+..|+++|+. ++|++.+.+ .+..| ...+++++ |.++
T Consensus 444 ~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaG-----aa~~L--~~~AllVNP~D~~~ 516 (934)
T PLN03064 444 LDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAG-----AAQSL--GAGAILVNPWNITE 516 (934)
T ss_pred eccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCc-----hHHHh--CCceEEECCCCHHH
Confidence 322 2 68899999999999877 3 788999999965 444455432 33334 11355554 7999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Q 012492 399 TARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLA 441 (462)
Q Consensus 399 la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~ 441 (462)
++++|.+.|..+++.++++.++.++++..+.+..-++.+.+-+
T Consensus 517 vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L 559 (934)
T PLN03064 517 VAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSEL 559 (934)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHH
Confidence 9999999995588999999999999998887776666544433
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=98.40 E-value=9.6e-07 Score=69.51 Aligned_cols=79 Identities=20% Similarity=0.252 Sum_probs=65.0
Q ss_pred ChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCC-ceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcC-CcHH
Q 012492 353 GPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNG-AGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQ-PEAV 430 (462)
Q Consensus 353 g~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G-~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~-~~~~ 430 (462)
.+..+.|+|+||+|+|..+.. ....+...| .++.+++++++.+++..++ +||+.++++++++++.+. .+++
T Consensus 11 ~~~r~~E~~a~G~~vi~~~~~------~~~~~~~~~~~~~~~~~~~el~~~i~~ll-~~~~~~~~ia~~a~~~v~~~~t~ 83 (92)
T PF13524_consen 11 PNMRIFEAMACGTPVISDDSP------GLREIFEDGEHIITYNDPEELAEKIEYLL-ENPEERRRIAKNARERVLKRHTW 83 (92)
T ss_pred CchHHHHHHHCCCeEEECChH------HHHHHcCCCCeEEEECCHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHhCCH
Confidence 366899999999999998652 122334455 5677789999999999999 799999999999999886 7899
Q ss_pred HHHHHHHH
Q 012492 431 VDIVKDIH 438 (462)
Q Consensus 431 ~~ia~~i~ 438 (462)
++.++.|.
T Consensus 84 ~~~~~~il 91 (92)
T PF13524_consen 84 EHRAEQIL 91 (92)
T ss_pred HHHHHHHH
Confidence 99888875
|
|
| >KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.38 E-value=9.1e-06 Score=84.68 Aligned_cols=173 Identities=14% Similarity=0.134 Sum_probs=112.9
Q ss_pred cEEEEEeCCCCC--ccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhcc--CCCCeEEeccchhHHHHH--
Q 012492 269 PAVLLMGGGEGM--GPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEE--WKIPVKVRGFETQMEKWM-- 342 (462)
Q Consensus 269 ~~iLv~gG~~~~--~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~--~~~~V~~~g~~~~~~~l~-- 342 (462)
.+|+++.|+... .--.+...+++..+.. .++..++|..-..... ...+... ...+|.+.+|.++..-++
T Consensus 278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~----~~~~~FiW~~~~~~~~-~~~~~~~~~~~~nV~~~~W~PQ~~lll~H 352 (496)
T KOG1192|consen 278 SVVYISFGSMVNSADLPEEQKKELAKALES----LQGVTFLWKYRPDDSI-YFPEGLPNRGRGNVVLSKWAPQNDLLLDH 352 (496)
T ss_pred CeEEEECCcccccccCCHHHHHHHHHHHHh----CCCceEEEEecCCcch-hhhhcCCCCCcCceEEecCCCcHHHhcCC
Confidence 688888888763 2123334445555543 1356678877655321 1112111 135799999998765442
Q ss_pred HhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHHHHHHH
Q 012492 343 GACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDELKRMS 418 (462)
Q Consensus 343 ~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~~~~m~ 418 (462)
.+..+||+++|-++++|++.+|+|+|..|.-++| ..|++.+++.|.+.+.. ....+.+++.+++ .+++..+...
T Consensus 353 ~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ-~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il-~~~~y~~~~~ 430 (496)
T KOG1192|consen 353 PAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQ-PLNARLLVRHGGGGVLDKRDLVSEELLEAIKEIL-ENEEYKEAAK 430 (496)
T ss_pred CcCcEEEECCcccHHHHHHhcCCceecCCccccc-hhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHH-cChHHHHHHH
Confidence 3356899999999999999999999999886665 55999999998765543 1223788889998 6888777666
Q ss_pred HHHHhhc-CCcHHHHHHHHHHHHHhccCCCcc
Q 012492 419 ENALKLA-QPEAVVDIVKDIHDLAAQRGPLAR 449 (462)
Q Consensus 419 ~~a~~~~-~~~~~~~ia~~i~~l~~~~~~~~~ 449 (462)
+-+.... ++... ..+..+.+...+.....+
T Consensus 431 ~l~~~~~~~p~~~-~~~~~~~e~~~~~~~~~~ 461 (496)
T KOG1192|consen 431 RLSEILRDQPISP-ELAVKWVEFVARHGGAKH 461 (496)
T ss_pred HHHHHHHcCCCCH-HHHHHHHHHHHhcCCCcc
Confidence 6666554 34555 666666665555443333
|
|
| >KOG3349 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.31 E-value=5.5e-06 Score=68.87 Aligned_cols=131 Identities=16% Similarity=0.222 Sum_probs=83.2
Q ss_pred cEEEEEeCCCCCccHHHHH--HHHHHhhhcccCCCCCceEEEEccCCHH----HHHHHhhccCCCCeEEeccchhHHHHH
Q 012492 269 PAVLLMGGGEGMGPVKETA--MALGESLLDKETGRPIGQLIIICGRNRT----LASTLQSEEWKIPVKVRGFETQMEKWM 342 (462)
Q Consensus 269 ~~iLv~gG~~~~~~~~~~l--~~l~~~l~~~~~~~~~~~~lvv~G~~~~----l~~~~~~~~~~~~V~~~g~~~~~~~l~ 342 (462)
..++|+.|+.....+...+ .+..+.|.+ +--.++++-.|++.. -.+.+. ....-.|....|.+.|.+++
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k----~G~~kLiiQ~Grg~~~~~d~~~~~~-k~~gl~id~y~f~psl~e~I 78 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQK----RGFTKLIIQIGRGQPFFGDPIDLIR-KNGGLTIDGYDFSPSLTEDI 78 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHH----cCccEEEEEecCCccCCCCHHHhhc-ccCCeEEEEEecCccHHHHH
Confidence 3567777776644332111 123344433 112367777888731 112221 11112344455568999999
Q ss_pred HhcchheecCChhhHHHHHHhCCCEEEecCC---CCccccchHHHHHCCceeeeCCHHHHHHHHHH
Q 012492 343 GACDCIITKAGPGTIAEALIRGLPIILNDYI---PGQEKGNVPYVVDNGAGVFTRSPKETARIVTE 405 (462)
Q Consensus 343 ~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~---~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ 405 (462)
+.||+||+++|.++++|.+..|+|.|+.... .++|..-|..+.+.|+-+.+...+ +.+.+.+
T Consensus 79 ~~AdlVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C~ps~-L~~~L~~ 143 (170)
T KOG3349|consen 79 RSADLVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYCTPST-LPAGLAK 143 (170)
T ss_pred hhccEEEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEEeeccc-hHHHHHh
Confidence 9999999999999999999999999887764 356666788899999888776433 3333433
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.5e-06 Score=75.14 Aligned_cols=86 Identities=13% Similarity=0.195 Sum_probs=48.2
Q ss_pred HHHHHHH--HhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC-c-----------ccccCCCcEEEEc
Q 012492 154 KEVEAGL--MEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH-P-----------TWFHPRVNRCYCP 219 (462)
Q Consensus 154 ~~l~~~l--~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~-~-----------~~~~~~~d~~i~~ 219 (462)
..+.+++ ++.+||+|+++++..... ...++.. .++|+|...|+..... . .+..+.+|.++++
T Consensus 61 ~~~~~~l~~~~~~~Dvv~~~~~~~~~~-~~~~~~~---~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~ 136 (160)
T PF13579_consen 61 RRLRRLLAARRERPDVVHAHSPTAGLV-AALARRR---RGIPLVVTVHGTLFRRGSRWKRRLYRWLERRLLRRADRVIVV 136 (160)
T ss_dssp HHHHHHCHHCT---SEEEEEHHHHHHH-HHHHHHH---HT--EEEE-SS-T------HHHHHHHHHHHHHHHH-SEEEES
T ss_pred HHHHHHHhhhccCCeEEEecccchhHH-HHHHHHc---cCCcEEEEECCCchhhccchhhHHHHHHHHHHHhcCCEEEEC
Confidence 3445566 899999999988543322 3334421 3899998888753111 1 1234568999999
Q ss_pred CHHHHHHHHHcCCCCCcEEEcCCC
Q 012492 220 SKEVAKRASYFGLEVSQIRVFGLP 243 (462)
Q Consensus 220 s~~~~~~l~~~gi~~~~i~v~g~p 243 (462)
|+..++.+.+.|++++++.+++|+
T Consensus 137 S~~~~~~l~~~g~~~~ri~vipnG 160 (160)
T PF13579_consen 137 SEAMRRYLRRYGVPPDRIHVIPNG 160 (160)
T ss_dssp SHHHHHHHHHH---GGGEEE----
T ss_pred CHHHHHHHHHhCCCCCcEEEeCcC
Confidence 999999999999999999999985
|
|
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00021 Score=66.52 Aligned_cols=102 Identities=20% Similarity=0.233 Sum_probs=72.2
Q ss_pred chhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHH----CCceee-eCCHHHHHHHHH-HHhc
Q 012492 335 ETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVD----NGAGVF-TRSPKETARIVT-EWFS 408 (462)
Q Consensus 335 ~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~----~G~g~~-~~~~~~la~~i~-~ll~ 408 (462)
...+.+.+..+|+++..+|.. .-.+.-.|+|+|.+|..+.| . |.-+.+. .|+... +..+...+..+. ++|
T Consensus 302 qqsfadiLH~adaalgmAGTA-tEQavGLGkPvi~fPg~GPQ-y-~pgFA~rQ~rLLG~sltlv~~~aq~a~~~~q~ll- 377 (412)
T COG4370 302 QQSFADILHAADAALGMAGTA-TEQAVGLGKPVIGFPGQGPQ-Y-NPGFAERQQRLLGASLTLVRPEAQAAAQAVQELL- 377 (412)
T ss_pred HHHHHHHHHHHHHHHHhccch-HHHhhccCCceeecCCCCCC-c-ChHHHHHHHHHhcceeeecCCchhhHHHHHHHHh-
Confidence 467889999999999888732 24499999999999865433 2 4333322 476554 444444455554 488
Q ss_pred CCHHHHHHHHHHHHhh-cCCcHHHHHHHHHHHH
Q 012492 409 TKTDELKRMSENALKL-AQPEAVVDIVKDIHDL 440 (462)
Q Consensus 409 ~d~~~~~~m~~~a~~~-~~~~~~~~ia~~i~~l 440 (462)
.||+..+....++++. .+..++.+||+.+.+.
T Consensus 378 ~dp~r~~air~nGqrRiGqaGaa~rIAe~l~e~ 410 (412)
T COG4370 378 GDPQRLTAIRHNGQRRIGQAGAARRIAEELGEM 410 (412)
T ss_pred cChHHHHHHHhcchhhccCcchHHHHHHHHHHh
Confidence 7999999999887654 5677888999887764
|
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00072 Score=67.06 Aligned_cols=110 Identities=14% Similarity=0.105 Sum_probs=62.9
Q ss_pred HHHHcCCCCCCcEEEEEeCC-CC-Ccc-HHHHHHHHHHhhhcccCCCCCceEEEEccCCHH-HHHHHhhc-cC--CCC-e
Q 012492 258 LRLELQMDPILPAVLLMGGG-EG-MGP-VKETAMALGESLLDKETGRPIGQLIIICGRNRT-LASTLQSE-EW--KIP-V 329 (462)
Q Consensus 258 ~r~~l~l~~~~~~iLv~gG~-~~-~~~-~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~-l~~~~~~~-~~--~~~-V 329 (462)
....+++.+++++|++..|+ .+ .+. -.+-+.++++.|.+ .++++++++|+.+. ..+.+.+. .. ..+ +
T Consensus 170 ~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~-----~~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~ 244 (348)
T PRK10916 170 TCAAFSLSSERPIIGFCPGAEFGPAKRWPHYHYAELAQQLID-----EGYQVVLFGSAKDHEAGNEILAALNTEQQAWCR 244 (348)
T ss_pred HHHHcCCCCCCCEEEEeCCCCCccccCCCHHHHHHHHHHHHH-----CCCeEEEEeCHHhHHHHHHHHHhccccccccee
Confidence 44455655456677665554 23 232 12334456666643 24566666555442 22333221 11 111 4
Q ss_pred EEecc--chhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCC
Q 012492 330 KVRGF--ETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYI 373 (462)
Q Consensus 330 ~~~g~--~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~ 373 (462)
.+.|- ..++..+++.||++|+.-.| .+-=|.+.|+|+|+.-.+
T Consensus 245 ~l~g~~sL~el~ali~~a~l~I~nDTG-p~HlAaA~g~P~valfGp 289 (348)
T PRK10916 245 NLAGETQLEQAVILIAACKAIVTNDSG-LMHVAAALNRPLVALYGP 289 (348)
T ss_pred eccCCCCHHHHHHHHHhCCEEEecCCh-HHHHHHHhCCCEEEEECC
Confidence 45564 37899999999999997543 345579999999987543
|
|
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.7e-05 Score=71.06 Aligned_cols=149 Identities=17% Similarity=0.141 Sum_probs=72.2
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhH
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHS 142 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 142 (462)
..|+|++.|. |....+..|+++|+++.++ ..+.++... ..........+...+. +. .
T Consensus 22 ~~iWiHa~Sv--GE~~a~~~Li~~l~~~~p~-~~illT~~T----~tg~~~~~~~~~~~v~---------~~----~--- 78 (186)
T PF04413_consen 22 PLIWIHAASV--GEVNAARPLIKRLRKQRPD-LRILLTTTT----PTGREMARKLLPDRVD---------VQ----Y--- 78 (186)
T ss_dssp T-EEEE-SSH--HHHHHHHHHHHHHTT---T-S-EEEEES-----CCHHHHHHGG-GGG-S---------EE----E---
T ss_pred CcEEEEECCH--HHHHHHHHHHHHHHHhCCC-CeEEEEecC----CchHHHHHHhCCCCeE---------EE----E---
Confidence 5799999998 8999999999999998664 455554321 1111111111110000 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCC---Cccc-------ccCC
Q 012492 143 CYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTC---HPTW-------FHPR 212 (462)
Q Consensus 143 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~---~~~~-------~~~~ 212 (462)
.+ ......+.++++.++||++|....-.+.-.+..++. .+||++.+....... ...| +.+.
T Consensus 79 ~P-----~D~~~~~~rfl~~~~P~~~i~~EtElWPnll~~a~~----~~ip~~LvNarls~~s~~~~~~~~~~~r~~l~~ 149 (186)
T PF04413_consen 79 LP-----LDFPWAVRRFLDHWRPDLLIWVETELWPNLLREAKR----RGIPVVLVNARLSERSFRRYRRFPFLFRPLLSR 149 (186)
T ss_dssp --------SSHHHHHHHHHHH--SEEEEES----HHHHHH---------S-EEEEEE--------------HHHHHHGGG
T ss_pred eC-----ccCHHHHHHHHHHhCCCEEEEEccccCHHHHHHHhh----cCCCEEEEeeeeccccchhhhhhHHHHHHHHHh
Confidence 00 111223457799999999887764332222334443 489998775433211 1111 2356
Q ss_pred CcEEEEcCHHHHHHHHHcCCCCCcEEEcCCC
Q 012492 213 VNRCYCPSKEVAKRASYFGLEVSQIRVFGLP 243 (462)
Q Consensus 213 ~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~p 243 (462)
.|.+++.+++..+.+.+.|.++++|.++||.
T Consensus 150 f~~i~aqs~~da~r~~~lG~~~~~v~v~Gnl 180 (186)
T PF04413_consen 150 FDRILAQSEADAERFRKLGAPPERVHVTGNL 180 (186)
T ss_dssp -SEEEESSHHHHHHHHTTT-S--SEEE---G
T ss_pred CCEEEECCHHHHHHHHHcCCCcceEEEeCcc
Confidence 7999999999999999999999999999974
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.002 Score=63.42 Aligned_cols=111 Identities=12% Similarity=0.100 Sum_probs=65.3
Q ss_pred HHHHHHcCCCCCCcEEEEEeCC-CCC-cc-HHHHHHHHHHhhhcccCCCCCceEEEEccCCHH-HHHHHhhccCCCC-eE
Q 012492 256 DNLRLELQMDPILPAVLLMGGG-EGM-GP-VKETAMALGESLLDKETGRPIGQLIIICGRNRT-LASTLQSEEWKIP-VK 330 (462)
Q Consensus 256 ~~~r~~l~l~~~~~~iLv~gG~-~~~-~~-~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~-l~~~~~~~~~~~~-V~ 330 (462)
+....+++++.++++|++..|+ .+. +. -.+-+.++++.+.+ .+.++++++|+.+. ..+.+.+. ...+ +.
T Consensus 162 ~~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~-----~~~~ivl~G~~~e~~~~~~i~~~-~~~~~~~ 235 (334)
T TIGR02195 162 AAALAKFGLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID-----QGYQVVLFGSAKDHPAGNEIEAL-LPGELRN 235 (334)
T ss_pred HHHHHHcCCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH-----CCCEEEEEEChhhHHHHHHHHHh-CCccccc
Confidence 3445667776667777666554 333 32 22344456666643 23566665554432 22333322 2222 33
Q ss_pred Eecc--chhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCC
Q 012492 331 VRGF--ETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYI 373 (462)
Q Consensus 331 ~~g~--~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~ 373 (462)
+.|. ..++..+++.||++|+.-.| .+-=|.++|+|+|+.-.+
T Consensus 236 l~g~~sL~el~ali~~a~l~I~~DSG-p~HlAaA~~~P~i~lfG~ 279 (334)
T TIGR02195 236 LAGETSLDEAVDLIALAKAVVTNDSG-LMHVAAALNRPLVALYGS 279 (334)
T ss_pred CCCCCCHHHHHHHHHhCCEEEeeCCH-HHHHHHHcCCCEEEEECC
Confidence 5564 37899999999999997543 345578999999987544
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.0021 Score=66.19 Aligned_cols=101 Identities=17% Similarity=0.128 Sum_probs=63.0
Q ss_pred hHHHHHHhcchheecC----ChhhHHHHHHhCCCEEEecCCC-C---ccccchHHHHHCCceeeeC---CHHHHH----H
Q 012492 337 QMEKWMGACDCIITKA----GPGTIAEALIRGLPIILNDYIP-G---QEKGNVPYVVDNGAGVFTR---SPKETA----R 401 (462)
Q Consensus 337 ~~~~l~~~aD~vV~~s----g~~t~~EAla~G~PvI~~~~~~-~---~~~~n~~~l~~~G~g~~~~---~~~~la----~ 401 (462)
+..+++..||+-|.|| .|-|.+|+.++|+|.|.++..+ | ++..+ .-...|.-++-. +.++.+ +
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~--~~~~~GV~VvdR~~~n~~e~v~~la~ 539 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIE--DPEEYGVYVVDRRDKNYDESVNQLAD 539 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS---HHGGGTEEEE-SSSS-HHHHHHHHHH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhc--cCcCCcEEEEeCCCCCHHHHHHHHHH
Confidence 6789999999999998 4899999999999999999853 2 11101 112234444332 344444 4
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHH
Q 012492 402 IVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHD 439 (462)
Q Consensus 402 ~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~ 439 (462)
.+......+...|..+++++.++++...|++......+
T Consensus 540 ~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~ 577 (633)
T PF05693_consen 540 FLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEK 577 (633)
T ss_dssp HHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 44444445677888888999999998888877666654
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.0032 Score=62.56 Aligned_cols=100 Identities=9% Similarity=0.025 Sum_probs=57.9
Q ss_pred CcEEEEEeCC-CCCcc-HHHHHHHHHHhhhcccCCCCCceEEEEccCCHH---HHHHHhhc-cCCCCeEEeccc--hhHH
Q 012492 268 LPAVLLMGGG-EGMGP-VKETAMALGESLLDKETGRPIGQLIIICGRNRT---LASTLQSE-EWKIPVKVRGFE--TQME 339 (462)
Q Consensus 268 ~~~iLv~gG~-~~~~~-~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~---l~~~~~~~-~~~~~V~~~g~~--~~~~ 339 (462)
.++|++..|+ ...+. -.+-+.++++.|.+ .+.++++++|++++ ..+.+.+. .....+.+.|.. .++.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~-----~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ 257 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA-----RGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELG 257 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH-----CCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHH
Confidence 3556554443 33332 12344456666643 24566766676542 12333322 112234566753 7899
Q ss_pred HHHHhcchheecCChhhHHHHHHhCCCEEEecCC
Q 012492 340 KWMGACDCIITKAGPGTIAEALIRGLPIILNDYI 373 (462)
Q Consensus 340 ~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~ 373 (462)
.+++.||++|+.-.| .+-=|.++|+|+|+.-.+
T Consensus 258 ali~~a~l~v~nDSG-p~HlAaA~g~P~v~lfGp 290 (352)
T PRK10422 258 ALIDHAQLFIGVDSA-PAHIAAAVNTPLICLFGA 290 (352)
T ss_pred HHHHhCCEEEecCCH-HHHHHHHcCCCEEEEECC
Confidence 999999999997543 235578999999987543
|
|
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00021 Score=62.88 Aligned_cols=70 Identities=20% Similarity=0.163 Sum_probs=48.1
Q ss_pred HHHHHhhCCCEEEECCcccchHHHHHHHHc---CCCCCCeEEEEecC--CC--CCCcccccCCCcEEEEcCHHHHHHH
Q 012492 157 EAGLMEYKPDIIISVHPLMQHIPLWVLKWQ---GLQKKVIFVTVITD--LN--TCHPTWFHPRVNRCYCPSKEVAKRA 227 (462)
Q Consensus 157 ~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~---~~~~~iP~v~~~~d--~~--~~~~~~~~~~~d~~i~~s~~~~~~l 227 (462)
..++.+.+||+|++++|....+...+++.. +. .+.++|.+.+= .. ....+.+++.+|.+++..++..+.+
T Consensus 85 ~~il~r~rPdvii~nGpg~~vp~~~~~~l~~~~~~-~~~kiIyIES~aRv~~lSlTGklly~~aD~f~VQW~~l~~~y 161 (170)
T PF08660_consen 85 LRILRRERPDVIISNGPGTCVPVCLAAKLLRLLGL-RGSKIIYIESFARVKTLSLTGKLLYPFADRFIVQWEELAEKY 161 (170)
T ss_pred HHHHHHhCCCEEEEcCCceeeHHHHHHHHHHHhhc-cCCcEEEEEeeeecCCCchHHHHHHHhCCEEEEcCHHHHhHC
Confidence 466889999999999998877655555542 11 26777765431 11 1234567788999999999887653
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.006 Score=60.12 Aligned_cols=266 Identities=14% Similarity=0.049 Sum_probs=125.7
Q ss_pred CCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhh
Q 012492 62 TKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIH 141 (462)
Q Consensus 62 ~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~ 141 (462)
||||||+..+. -|...-+..+...|++.+|+....+++. .+ ...+ .+..+..+..+.....++ +
T Consensus 1 ~~kIliir~~~-iGD~vlt~p~~~~lk~~~P~a~i~~~~~------~~-~~~i-------~~~~p~I~~vi~~~~~~~-~ 64 (334)
T COG0859 1 MMKILVIRLSK-LGDVVLTLPLLRTLKKAYPNAKIDVLVP------KG-FAPI-------LKLNPEIDKVIIIDKKKK-G 64 (334)
T ss_pred CceEEEEeccc-hhHHHhHHHHHHHHHHHCCCCEEEEEec------cc-hHHH-------HhcChHhhhhcccccccc-c
Confidence 68999998875 6999999999999999998754333332 11 1111 000000000000000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccccCC-Cc-EEEEc
Q 012492 142 SCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPR-VN-RCYCP 219 (462)
Q Consensus 142 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~~~-~d-~~i~~ 219 (462)
.......++.+.+++.++|+|+......-.. ++... .++|... ..+.. ....++... .. .-...
T Consensus 65 ------~~~~~~~~l~~~lr~~~yD~vidl~~~~ksa--~l~~~----~~~~~r~-g~~~~-~~r~~~~~~~~~~~~~~~ 130 (334)
T COG0859 65 ------LGLKERLALLRTLRKERYDAVIDLQGLLKSA--LLALL----LGIPFRI-GFDKK-SARELLLNKFYPRLDKPE 130 (334)
T ss_pred ------cchHHHHHHHHHhhccCCCEEEECcccHHHH--HHHHH----hCCCccc-ccccc-cchhHHHHHhhhccCccc
Confidence 0133445677889999999999877543322 22222 1344321 11110 001111100 01 01112
Q ss_pred CHHHHHHHHH----cCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeC-CCCCcc--HHHHHHHHHH
Q 012492 220 SKEVAKRASY----FGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGG-GEGMGP--VKETAMALGE 292 (462)
Q Consensus 220 s~~~~~~l~~----~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG-~~~~~~--~~~~l~~l~~ 292 (462)
.+...+.+.. .+..... .....+............+.-.. +++|++..| +.+..+ -.+-+.++++
T Consensus 131 ~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~i~i~pg~s~~~~K~wp~e~~~~l~~ 202 (334)
T COG0859 131 GQHVVERYLALLEDLGLYPPP-------EPQLDFPLPRPPIELAKNLAKFD-RPYIVINPGASRGSAKRWPLEHYAELAE 202 (334)
T ss_pred chhHHHHHHHHHHHhcCCCCC-------CCccCcccccCHHHHHHHHHhcC-CCeEEEeccccccccCCCCHHHHHHHHH
Confidence 2333333322 2222111 00001110011111111111111 577877777 554332 2344556667
Q ss_pred hhhcccCCCCCceEEEEccCCHH--HHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCChhhHHHHHHhCCCEE
Q 012492 293 SLLDKETGRPIGQLIIICGRNRT--LASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAGPGTIAEALIRGLPII 368 (462)
Q Consensus 293 ~l~~~~~~~~~~~~lvv~G~~~~--l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI 368 (462)
.+.++ .++++ ++|..++ ..+.+.+ .....+.+.|.. .++..+++.||++|+...|. +-=|.|.|+|+|
T Consensus 203 ~l~~~-----~~~Vv-l~g~~~e~e~~~~i~~-~~~~~~~l~~k~sL~e~~~li~~a~l~I~~DSg~-~HlAaA~~~P~I 274 (334)
T COG0859 203 LLIAK-----GYQVV-LFGGPDEEERAEEIAK-GLPNAVILAGKTSLEELAALIAGADLVIGNDSGP-MHLAAALGTPTI 274 (334)
T ss_pred HHHHC-----CCEEE-EecChHHHHHHHHHHH-hcCCccccCCCCCHHHHHHHHhcCCEEEccCChH-HHHHHHcCCCEE
Confidence 77652 34544 4454442 2222322 111122255543 79999999999999976543 355799999999
Q ss_pred EecCC
Q 012492 369 LNDYI 373 (462)
Q Consensus 369 ~~~~~ 373 (462)
.....
T Consensus 275 ~iyg~ 279 (334)
T COG0859 275 ALYGP 279 (334)
T ss_pred EEECC
Confidence 98754
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.026 Score=53.71 Aligned_cols=260 Identities=14% Similarity=0.119 Sum_probs=138.2
Q ss_pred HHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC--ccc-----------ccCCCcEEEEc
Q 012492 153 AKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH--PTW-----------FHPRVNRCYCP 219 (462)
Q Consensus 153 ~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~--~~~-----------~~~~~d~~i~~ 219 (462)
++.+.+..+..+-+-++.++-+...+ |.+-..+....-.++++++..+... ..| ..+.+.++++
T Consensus 28 a~avi~~a~~~r~~rff~HGqFn~~l--wlall~g~~~~~q~yWhiWGaDLYe~~~~lk~rlfy~lRR~aq~rvg~v~a- 104 (322)
T PRK02797 28 AEAVIAKAKANRAQRFFLHGQFNPTL--WLALLSGKIKPKQFYWHIWGADLYEESKGLKFRLFYPLRRLAQKRVGHVFA- 104 (322)
T ss_pred HHHHHHHHhhCccceEEEecCCCHHH--HHHHHhCCcCccceEEEEEChhhhhcccchhHHHHHHHHHHHHhhcCeEEE-
Confidence 44455556667788888888764443 3332222112334566665432111 111 1234567777
Q ss_pred CHHHHHHHHH--cCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCC-ccHHHHHHHHHHhhhc
Q 012492 220 SKEVAKRASY--FGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGM-GPVKETAMALGESLLD 296 (462)
Q Consensus 220 s~~~~~~l~~--~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~-~~~~~~l~~l~~~l~~ 296 (462)
+..+...+.+ .+++.+ ..+.+.-.++..... ..+ -.+..+..+.+|.|-.. ....+++..+.+..
T Consensus 105 trGD~~~~a~~~~~v~~~-llyfpt~m~~~l~~~--~~~-------~~~~~~~tIlvGNSgd~SN~Hie~L~~l~~~~-- 172 (322)
T PRK02797 105 TRGDLSYFAQRHPKVPGS-LLYFPTRMDPSLNTM--AND-------RQRAGKMTILVGNSGDRSNRHIEALRALHQQF-- 172 (322)
T ss_pred ecchHHHHHHhcCCCCcc-EEecCCcchhhhccc--ccc-------ccCCCceEEEEeCCCCCcccHHHHHHHHHHHh--
Confidence 6666555433 255433 433332222222211 000 01222334444544332 34556666554443
Q ss_pred ccCCCCCceEEEEccC--C-HHHHHHHhhc----cCCCCeEEe-ccc--hhHHHHHHhcchheecC----ChhhHHHHHH
Q 012492 297 KETGRPIGQLIIICGR--N-RTLASTLQSE----EWKIPVKVR-GFE--TQMEKWMGACDCIITKA----GPGTIAEALI 362 (462)
Q Consensus 297 ~~~~~~~~~~lvv~G~--~-~~l~~~~~~~----~~~~~V~~~-g~~--~~~~~l~~~aD~vV~~s----g~~t~~EAla 362 (462)
..++++++..|- + +++.+.+++. -..+++..+ .+. ++...+++.||+.+..- |-+|++=.+.
T Consensus 173 ----~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~ 248 (322)
T PRK02797 173 ----GDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQ 248 (322)
T ss_pred ----CCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHH
Confidence 246788887765 3 3455555543 223566654 333 68889999999977542 4567889999
Q ss_pred hCCCEEEecCCCCccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHh
Q 012492 363 RGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 363 ~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~ 442 (462)
+|+|+++....+-.+ .+.+.|+-++......-...+. +.+++|...-++... ++.++.++.|.++++
T Consensus 249 ~G~~v~l~r~n~fwq-----dl~e~gv~Vlf~~d~L~~~~v~-------e~~rql~~~dk~~I~-Ff~pn~~~~W~~~l~ 315 (322)
T PRK02797 249 LGKPVVLSRDNPFWQ-----DLTEQGLPVLFTGDDLDEDIVR-------EAQRQLASVDKNIIA-FFSPNYLQGWRNALA 315 (322)
T ss_pred CCCcEEEecCCchHH-----HHHhCCCeEEecCCcccHHHHH-------HHHHHHHhhCcceee-ecCHhHHHHHHHHHH
Confidence 999999987644332 4778888775432211111111 122334443333333 888999999999886
Q ss_pred cc
Q 012492 443 QR 444 (462)
Q Consensus 443 ~~ 444 (462)
..
T Consensus 316 ~~ 317 (322)
T PRK02797 316 IA 317 (322)
T ss_pred Hh
Confidence 43
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.016 Score=55.51 Aligned_cols=83 Identities=19% Similarity=0.199 Sum_probs=49.6
Q ss_pred HHHHHHHHhhhcccCCCCCceEEEEccCCHH-HHHHHhh-ccCCCCeEEecc--chhHHHHHHhcchheecCChhhHHHH
Q 012492 285 ETAMALGESLLDKETGRPIGQLIIICGRNRT-LASTLQS-EEWKIPVKVRGF--ETQMEKWMGACDCIITKAGPGTIAEA 360 (462)
Q Consensus 285 ~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~-l~~~~~~-~~~~~~V~~~g~--~~~~~~l~~~aD~vV~~sg~~t~~EA 360 (462)
+.+.++++.+.+ . ++++++++|+++. ..+.+.+ .+....+.+.|. ..++..+++.||++|+...| ++-=|
T Consensus 140 ~~~~~l~~~l~~----~-~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l~I~~Dsg-~~HlA 213 (279)
T cd03789 140 ERFAALADRLLA----R-GARVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADLVVTNDSG-PMHLA 213 (279)
T ss_pred HHHHHHHHHHHH----C-CCEEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCEEEeeCCH-HHHHH
Confidence 344455566654 1 4666666555432 2233332 111222344554 37899999999999997443 34555
Q ss_pred HHhCCCEEEecCC
Q 012492 361 LIRGLPIILNDYI 373 (462)
Q Consensus 361 la~G~PvI~~~~~ 373 (462)
.++|+|+|+.-.+
T Consensus 214 ~a~~~p~i~l~g~ 226 (279)
T cd03789 214 AALGTPTVALFGP 226 (279)
T ss_pred HHcCCCEEEEECC
Confidence 7999999987654
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.021 Score=55.90 Aligned_cols=98 Identities=12% Similarity=-0.061 Sum_probs=57.5
Q ss_pred CcEEE-EEeCCCCCcc-HHHHHHHHHHhhhcccCCCCCceEEEEccCCHH--HHHHHhhccCCCCeEEeccc--hhHHHH
Q 012492 268 LPAVL-LMGGGEGMGP-VKETAMALGESLLDKETGRPIGQLIIICGRNRT--LASTLQSEEWKIPVKVRGFE--TQMEKW 341 (462)
Q Consensus 268 ~~~iL-v~gG~~~~~~-~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~--l~~~~~~~~~~~~V~~~g~~--~~~~~l 341 (462)
.++++ +.|++...+. -.+-+.++++.+.+ .+.++++.+|...+ ..+.+.+. ..++.+.|.. .++..+
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~-----~~~~ivl~~G~~~e~~~~~~i~~~--~~~~~l~g~~sL~elaal 250 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAP-----SGLRIKLPWGAEHEEQRAKRLAEG--FPYVEVLPKLSLEQVARV 250 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHH-----CCCeEEEeCCCHHHHHHHHHHHcc--CCcceecCCCCHHHHHHH
Confidence 45554 4455443332 12334456666643 14555554454332 23334332 2346666654 789999
Q ss_pred HHhcchheecCChhhHHHHHHhCCCEEEecCC
Q 012492 342 MGACDCIITKAGPGTIAEALIRGLPIILNDYI 373 (462)
Q Consensus 342 ~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~ 373 (462)
++.||++|+...| .+-=|.++|+|+|+.-.+
T Consensus 251 i~~a~l~I~nDSG-p~HlA~A~g~p~valfGp 281 (322)
T PRK10964 251 LAGAKAVVSVDTG-LSHLTAALDRPNITLYGP 281 (322)
T ss_pred HHhCCEEEecCCc-HHHHHHHhCCCEEEEECC
Confidence 9999999997543 346689999999997654
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.013 Score=60.03 Aligned_cols=266 Identities=12% Similarity=0.070 Sum_probs=142.6
Q ss_pred HHHHHHHhhCCCEEEECCcccchHH--HHHHHHcCCCCCCeEEEEecCCCCCCcccccCCCcEEEEc---C-HHHHHHHH
Q 012492 155 EVEAGLMEYKPDIIISVHPLMQHIP--LWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCP---S-KEVAKRAS 228 (462)
Q Consensus 155 ~l~~~l~~~kPDvVi~~~~~~~~~~--~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~~~~d~~i~~---s-~~~~~~l~ 228 (462)
++.+.+++-+.|++|...++..+.- ..+.+ ..|+=...-.+- ..--....|++++- | .+.++.+.
T Consensus 649 kiA~~I~qD~I~ILvnlnGyTkgarneifAlr------PAPIQv~wlGyP---gTtGa~~mDYiITDs~tsPl~~a~~ys 719 (966)
T KOG4626|consen 649 KIADKIRQDKIHILVNLNGYTKGARNEIFALR------PAPIQVMWLGYP---GTTGATFMDYIITDSVTSPLELAQQYS 719 (966)
T ss_pred HHHHHHhhcCceEEEeccccccccccceeecc------CCceeEEeecCC---CCCCCceeeEEeecccCChHHHHHHHH
Confidence 5667899999999998877654320 11221 344321111110 01112345666542 2 23333333
Q ss_pred H-c-CCCCCcEEEcCCCCCh--hhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCc
Q 012492 229 Y-F-GLEVSQIRVFGLPIRP--SFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIG 304 (462)
Q Consensus 229 ~-~-gi~~~~i~v~g~pv~~--~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~ 304 (462)
+ . .+| ....+|.+-.. ....++.. -.|..++++++. +++..+..+ .+--.+.+...+..|+. .|+-
T Consensus 720 EkLv~lP--h~ffi~d~~qk~~~~~dpn~k--P~r~~y~Lp~d~-vvf~~FNqL-yKidP~~l~~W~~ILk~----VPnS 789 (966)
T KOG4626|consen 720 EKLVYLP--HCFFIGDHKQKNQDVLDPNNK--PTRSQYGLPEDA-VVFCNFNQL-YKIDPSTLQMWANILKR----VPNS 789 (966)
T ss_pred HHHhhCC--ceEEecCcccccccccCCCCC--CCCCCCCCCCCe-EEEeechhh-hcCCHHHHHHHHHHHHh----CCcc
Confidence 2 2 344 34445443221 12222111 245678998765 333222221 23223344433333432 3554
Q ss_pred eEEEEc----cCCHHHHHHHhhccCC-CCeEEeccc--hhHHHHHHhcchheec---CChhhHHHHHHhCCCEEEecCCC
Q 012492 305 QLIIIC----GRNRTLASTLQSEEWK-IPVKVRGFE--TQMEKWMGACDCIITK---AGPGTIAEALIRGLPIILNDYIP 374 (462)
Q Consensus 305 ~~lvv~----G~~~~l~~~~~~~~~~-~~V~~~g~~--~~~~~l~~~aD~vV~~---sg~~t~~EAla~G~PvI~~~~~~ 374 (462)
.+++.+ |+ ...++..+++|++ ++|.|.+-. ++=-+-...+|+.+-. .|..|-+|.+-+|+|+|..|...
T Consensus 790 ~LwllrfPa~ge-~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~~LaDv~LDTplcnGhTTg~dvLw~GvPmVTmpge~ 868 (966)
T KOG4626|consen 790 VLWLLRFPAVGE-QRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGVPMVTMPGET 868 (966)
T ss_pred eeEEEeccccch-HHHHHHHHHhCCCccceeeccccchHHHHHhhhhhhhcccCcCcCCcccchhhhccCCceeecccHH
Confidence 333322 33 2466777777765 667776554 3333455677876633 26778899999999999998643
Q ss_pred CccccchHHHHHCCceee-eCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc--C-CcHHHHHHHHHHHHH
Q 012492 375 GQEKGNVPYVVDNGAGVF-TRSPKETARIVTEWFSTKTDELKRMSENALKLA--Q-PEAVVDIVKDIHDLA 441 (462)
Q Consensus 375 ~~~~~n~~~l~~~G~g~~-~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~--~-~~~~~~ia~~i~~l~ 441 (462)
.-....+..+...|+|-+ .++.++..+.-.+|- .|.+.++++....+... . -+.....+..++++.
T Consensus 869 lAsrVa~Sll~~~Gl~hliak~~eEY~~iaV~La-td~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y 938 (966)
T KOG4626|consen 869 LASRVAASLLTALGLGHLIAKNREEYVQIAVRLA-TDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLY 938 (966)
T ss_pred HHHHHHHHHHHHcccHHHHhhhHHHHHHHHHHhh-cCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHH
Confidence 222223455667788754 467888888888887 68888888887665543 2 244555555555543
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.051 Score=55.89 Aligned_cols=274 Identities=14% Similarity=0.097 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCccc--------c---cCCCcE
Q 012492 147 AMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTW--------F---HPRVNR 215 (462)
Q Consensus 147 ~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~--------~---~~~~d~ 215 (462)
..+..++.++.+.++ .-|+|-.+.......|.. .|.++ ++.++..+.|-..+....+ + .-.+|.
T Consensus 126 ~vN~~FA~~i~~~~~--~~D~VWVhDYhL~llP~~-LR~~~--~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDl 200 (474)
T PF00982_consen 126 RVNRRFADAIAEVYR--PGDLVWVHDYHLMLLPQM-LRERG--PDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADL 200 (474)
T ss_dssp HHHHHHHHHHGGG----TT-EEEEESGGGTTHHHH-HHHTT----SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSE
T ss_pred HHHHHHHHHHHHhCc--CCCEEEEeCCcHHHHHHH-HHhhc--CCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCE
Confidence 345566666544444 335666666655555543 34433 4777777776543211100 0 124788
Q ss_pred EEEcCHHHHHHHHH-----cCCC--CC-----------cEEEcCCCCChhhhccc----C---ChHHHHHHcCCCCCCcE
Q 012492 216 CYCPSKEVAKRASY-----FGLE--VS-----------QIRVFGLPIRPSFVRAV----I---SKDNLRLELQMDPILPA 270 (462)
Q Consensus 216 ~i~~s~~~~~~l~~-----~gi~--~~-----------~i~v~g~pv~~~~~~~~----~---~~~~~r~~l~l~~~~~~ 270 (462)
+-..++...+.+.. .|+. .. ++.+.+.+|++..+... . ..++++++++ ++..
T Consensus 201 IgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~---~~~~ 277 (474)
T PF00982_consen 201 IGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFK---GKRK 277 (474)
T ss_dssp EEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHHTT---T-SE
T ss_pred EEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcC---CCcE
Confidence 88888777766532 2321 11 24455667776544320 0 1234666664 3223
Q ss_pred EEEEeCCCC-CccHHHHHHHHHHhhhcccCCCCC----ceEEEEccCC----H---HHHHHHhh--------ccC--CCC
Q 012492 271 VLLMGGGEG-MGPVKETAMALGESLLDKETGRPI----GQLIIICGRN----R---TLASTLQS--------EEW--KIP 328 (462)
Q Consensus 271 iLv~gG~~~-~~~~~~~l~~l~~~l~~~~~~~~~----~~~lvv~G~~----~---~l~~~~~~--------~~~--~~~ 328 (462)
+++...+.. .+++.+-+.++-+.|.+ +|+ +.++.++-+. . ++++.+++ ++. ...
T Consensus 278 ii~gvDrld~~kGi~~kl~Afe~fL~~----~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~P 353 (474)
T PF00982_consen 278 IIVGVDRLDYTKGIPEKLRAFERFLER----YPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTP 353 (474)
T ss_dssp EEEEE--B-GGG-HHHHHHHHHHHHHH-----GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-S
T ss_pred EEEEeccchhhcCHHHHHHHHHHHHHh----CcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCcee
Confidence 455444544 46677666655433332 343 3444443221 1 13333332 121 134
Q ss_pred eEEecc-c--hhHHHHHHhcchheecC---C-hhhHHHHHHhCCC----EEEecCCCCccccchHHHHHCCceeeeC--C
Q 012492 329 VKVRGF-E--TQMEKWMGACDCIITKA---G-PGTIAEALIRGLP----IILNDYIPGQEKGNVPYVVDNGAGVFTR--S 395 (462)
Q Consensus 329 V~~~g~-~--~~~~~l~~~aD~vV~~s---g-~~t~~EAla~G~P----vI~~~~~~~~~~~n~~~l~~~G~g~~~~--~ 395 (462)
|.++.. . ++...+|+.||+++.+| | ..+..|..+|..+ +|++.+.+ .+..|.+ .++.++ |
T Consensus 354 I~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaG-----aa~~L~~--~al~VNP~d 426 (474)
T PF00982_consen 354 IIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAG-----AAEQLSE--AALLVNPWD 426 (474)
T ss_dssp EEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBG-----GGGT-TT--S-EEE-TT-
T ss_pred EEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCC-----HHHHcCC--ccEEECCCC
Confidence 665543 2 68889999999987665 3 5667999999887 44444322 2223321 335554 7
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHH
Q 012492 396 PKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHD 439 (462)
Q Consensus 396 ~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~ 439 (462)
.++++++|.+.|...++.|+...+..++....+.+..=++.+.+
T Consensus 427 ~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~ 470 (474)
T PF00982_consen 427 IEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLR 470 (474)
T ss_dssp HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHH
Confidence 99999999999966777776666666666655554444444433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG5017 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0025 Score=52.32 Aligned_cols=122 Identities=15% Similarity=0.196 Sum_probs=81.6
Q ss_pred EEEEeCCCCCccHHHHHHHHH-HhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccc--hhHHHHHHhcch
Q 012492 271 VLLMGGGEGMGPVKETAMALG-ESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDC 347 (462)
Q Consensus 271 iLv~gG~~~~~~~~~~l~~l~-~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~ 347 (462)
++|+.|+. +.++..++...- ..+.+ +-.-++|+-.|+++-.. + ...++.||. +.|..+...|.+
T Consensus 2 ifVTvGst-f~~f~rlv~k~e~~el~~----~i~e~lIvQyGn~d~kp--v------agl~v~~F~~~~kiQsli~darI 68 (161)
T COG5017 2 IFVTVGST-FYPFNRLVLKIEVLELTE----LIQEELIVQYGNGDIKP--V------AGLRVYGFDKEEKIQSLIHDARI 68 (161)
T ss_pred eEEEecCc-cchHHHHHhhHHHHHHHH----HhhhheeeeecCCCccc--c------cccEEEeechHHHHHHHhhcceE
Confidence 46676776 445555443310 11111 11236788888875211 1 125666765 789999999999
Q ss_pred heecCChhhHHHHHHhCCCEEEecCCC-------CccccchHHHHHCCceeeeCCHHH-HHHHHHH
Q 012492 348 IITKAGPGTIAEALIRGLPIILNDYIP-------GQEKGNVPYVVDNGAGVFTRSPKE-TARIVTE 405 (462)
Q Consensus 348 vV~~sg~~t~~EAla~G~PvI~~~~~~-------~~~~~n~~~l~~~G~g~~~~~~~~-la~~i~~ 405 (462)
+|+++|.++++-++..++|.|+.|... ++|..-+..+.+.++.+.+++.+. +.+.++.
T Consensus 69 VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~~spte~~L~a~l~~ 134 (161)
T COG5017 69 VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVACSPTELVLQAGLQV 134 (161)
T ss_pred EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhcCceEEEcCCchhhHHhHhh
Confidence 999999999999999999999998742 455556778888898888886554 4444433
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.013 Score=57.27 Aligned_cols=99 Identities=13% Similarity=0.045 Sum_probs=56.1
Q ss_pred CCcEEEEE-eCCCCCccH-HHHHHHHHHhhhcccCCCCCceEEEEccCCHH--HHHHHhhccCCCCeEEeccc--hhHHH
Q 012492 267 ILPAVLLM-GGGEGMGPV-KETAMALGESLLDKETGRPIGQLIIICGRNRT--LASTLQSEEWKIPVKVRGFE--TQMEK 340 (462)
Q Consensus 267 ~~~~iLv~-gG~~~~~~~-~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~--l~~~~~~~~~~~~V~~~g~~--~~~~~ 340 (462)
++++|++. |++...+.. .+-+.++++.|.+ .++++++++|...+ ..+.+.+. . .+..+.|.. .++..
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~-----~~~~~vl~~g~~~e~~~~~~i~~~-~-~~~~l~g~~sL~el~a 250 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLA-----RGLQIVLPWGNDAEKQRAERIAEA-L-PGAVVLPKMSLAEVAA 250 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHH-----CCCeEEEeCCCHHHHHHHHHHHhh-C-CCCeecCCCCHHHHHH
Confidence 45566554 444433322 2344456666643 14565555454432 22333321 1 123455643 68899
Q ss_pred HHHhcchheecCChhhHHHHHHhCCCEEEecCC
Q 012492 341 WMGACDCIITKAGPGTIAEALIRGLPIILNDYI 373 (462)
Q Consensus 341 l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~ 373 (462)
+++.||++|+.-.| .+-=|.++|+|+|..-.+
T Consensus 251 li~~a~l~I~~DSg-p~HlAaa~g~P~i~lfg~ 282 (319)
T TIGR02193 251 LLAGADAVVGVDTG-LTHLAAALDKPTVTLYGA 282 (319)
T ss_pred HHHcCCEEEeCCCh-HHHHHHHcCCCEEEEECC
Confidence 99999999997543 345578999999987543
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.071 Score=51.51 Aligned_cols=217 Identities=14% Similarity=0.094 Sum_probs=118.1
Q ss_pred HHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC--CCccc----c-------cCCCcEEEEcCH
Q 012492 155 EVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT--CHPTW----F-------HPRVNRCYCPSK 221 (462)
Q Consensus 155 ~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~--~~~~~----~-------~~~~d~~i~~s~ 221 (462)
.+.+..+..+-+=++.++-+...+ |++-..+....-.++++++..+. ....| + .+.+.++++ +.
T Consensus 69 avi~~a~~~r~~kff~HGqFn~~l--wlaLl~g~~~~~k~~WhIWGaDLYe~~~~~k~rlfy~lRr~aq~rvg~V~a-t~ 145 (360)
T PF07429_consen 69 AVIAKAKADRADKFFLHGQFNPWL--WLALLFGKIKLKKCYWHIWGADLYEDSRSLKFRLFYFLRRLAQKRVGHVFA-TR 145 (360)
T ss_pred HHHHHHhhCccceEEEeccCcHHH--HHHHHcCCccccceEEEEeCchhhccccccchhHHHHHHHHHHhhcCeEEE-Ec
Confidence 344455667888888888664443 33322222123455666654321 11111 1 133455655 45
Q ss_pred HHHHHHHH-cCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCC-ccHHHHHHHHHHhhhcccC
Q 012492 222 EVAKRASY-FGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGM-GPVKETAMALGESLLDKET 299 (462)
Q Consensus 222 ~~~~~l~~-~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~-~~~~~~l~~l~~~l~~~~~ 299 (462)
.+...+.+ ++-.+....+.+..+++.......+ -..+.+.-+.+|.|-.. ....+++.++.+...
T Consensus 146 GDl~~~~q~~~~~~~~~lyfPt~m~~~~~~~~~~---------~~~~~~ltILvGNSgd~sNnHieaL~~L~~~~~---- 212 (360)
T PF07429_consen 146 GDLAYFQQRYPRVPASLLYFPTRMDPALTLSEKN---------KKNKGKLTILVGNSGDPSNNHIEALEALKQQFG---- 212 (360)
T ss_pred chHHHHHHHcCCCCceEEEcCCCCchhhhccccc---------cCCCCceEEEEcCCCCCCccHHHHHHHHHHhcC----
Confidence 55555554 3322334555565565544322100 01122333444544333 346666766654332
Q ss_pred CCCCceEEEEccCC---HHHHHHHhhc----cCCCCeEEe-ccc--hhHHHHHHhcchheecC----ChhhHHHHHHhCC
Q 012492 300 GRPIGQLIIICGRN---RTLASTLQSE----EWKIPVKVR-GFE--TQMEKWMGACDCIITKA----GPGTIAEALIRGL 365 (462)
Q Consensus 300 ~~~~~~~lvv~G~~---~~l~~~~~~~----~~~~~V~~~-g~~--~~~~~l~~~aD~vV~~s----g~~t~~EAla~G~ 365 (462)
.+.++++..|-+ .++.+++.+. -...++.++ .+. +|..++++.||+.+... |-++++=++.+|+
T Consensus 213 --~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~ 290 (360)
T PF07429_consen 213 --DDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGK 290 (360)
T ss_pred --CCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCC
Confidence 356777766543 3455555443 233567654 454 68889999999988754 4567899999999
Q ss_pred CEEEecCCCCccccchHHHHHCCceeeeC
Q 012492 366 PIILNDYIPGQEKGNVPYVVDNGAGVFTR 394 (462)
Q Consensus 366 PvI~~~~~~~~~~~n~~~l~~~G~g~~~~ 394 (462)
||++....+- -+.+.+.|..++..
T Consensus 291 ~v~L~~~np~-----~~~l~~~~ipVlf~ 314 (360)
T PF07429_consen 291 KVFLSRDNPF-----WQDLKEQGIPVLFY 314 (360)
T ss_pred eEEEecCChH-----HHHHHhCCCeEEec
Confidence 9999875432 23577788766654
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.033 Score=55.12 Aligned_cols=100 Identities=10% Similarity=0.048 Sum_probs=57.7
Q ss_pred CCcEEEEEeCCCC-Ccc-HHHHHHHHHHhhhcccCCCCCceEEEEccCCHH---HHHHHhhc-cCCCCeEEeccc--hhH
Q 012492 267 ILPAVLLMGGGEG-MGP-VKETAMALGESLLDKETGRPIGQLIIICGRNRT---LASTLQSE-EWKIPVKVRGFE--TQM 338 (462)
Q Consensus 267 ~~~~iLv~gG~~~-~~~-~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~---l~~~~~~~-~~~~~V~~~g~~--~~~ 338 (462)
++++|++..|+.. .+. -.+-+.++++.|.+ .+.++++++|+++. ..+.+.+. +...-+.+.|.. .++
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~-----~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el 254 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHA-----RGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQL 254 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHh-----CCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHH
Confidence 3456655544432 222 13344456666643 24566666665421 22334322 111224456654 799
Q ss_pred HHHHHhcchheecCChhhHHHHHHhCCCEEEecC
Q 012492 339 EKWMGACDCIITKAGPGTIAEALIRGLPIILNDY 372 (462)
Q Consensus 339 ~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~ 372 (462)
..+++.||++|+.-.| .+-=|.|+|+|+|+.-.
T Consensus 255 ~ali~~a~l~Vs~DSG-p~HlAaA~g~p~v~Lfg 287 (344)
T TIGR02201 255 AALIDHARLFIGVDSV-PMHMAAALGTPLVALFG 287 (344)
T ss_pred HHHHHhCCEEEecCCH-HHHHHHHcCCCEEEEEC
Confidence 9999999999997543 34668999999998754
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.22 Score=50.91 Aligned_cols=272 Identities=13% Similarity=0.065 Sum_probs=142.4
Q ss_pred HHHHHHHHHHHHHHHhhCC-CEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCccc--------c---cCCCc
Q 012492 147 AMAAYYAKEVEAGLMEYKP-DIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTW--------F---HPRVN 214 (462)
Q Consensus 147 ~~~~~~~~~l~~~l~~~kP-DvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~--------~---~~~~d 214 (462)
..+..++.++ ++..+| |+|-++.......|. ..|..+ .+.++-.+.|-..+....| + .-.+|
T Consensus 108 ~VN~~FA~~v---~~~~~~~D~VWVHDYhL~llp~-~LR~~~--~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aD 181 (474)
T PRK10117 108 RVNALLADKL---LPLLKDDDIIWIHDYHLLPFAS-ELRKRG--VNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYD 181 (474)
T ss_pred HHHHHHHHHH---HHhcCCCCEEEEeccHhhHHHH-HHHHhC--CCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCc
Confidence 3455666655 444555 577666655544443 344433 3555555555433211100 0 01356
Q ss_pred EEEEcCHHHHHHHHH-----cCCCC------------CcEEEcCCCCChhhhcccC------ChHHHHHHcCCCCCCcEE
Q 012492 215 RCYCPSKEVAKRASY-----FGLEV------------SQIRVFGLPIRPSFVRAVI------SKDNLRLELQMDPILPAV 271 (462)
Q Consensus 215 ~~i~~s~~~~~~l~~-----~gi~~------------~~i~v~g~pv~~~~~~~~~------~~~~~r~~l~l~~~~~~i 271 (462)
.+-..++...+.+.+ .|+.. -++.+.+.+|+++.+.... ...+++++++ ++++|
T Consensus 182 lIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~~lr~~~~---~~~li 258 (474)
T PRK10117 182 LLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAELK---NVQNI 258 (474)
T ss_pred cceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHHHHHHHcC---CCeEE
Confidence 666666666655432 12211 1234455666765443211 1123455553 34433
Q ss_pred EEEeCCCCCccHHHHHHHHHHhhhcccCCCCCc----eEEEEccCC----H---HHHHHHhhc--------cC--CCCeE
Q 012492 272 LLMGGGEGMGPVKETAMALGESLLDKETGRPIG----QLIIICGRN----R---TLASTLQSE--------EW--KIPVK 330 (462)
Q Consensus 272 Lv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~----~~lvv~G~~----~---~l~~~~~~~--------~~--~~~V~ 330 (462)
+-+-+....|++.+-+.++-..|.+ +|++ .++.++-+. . ++++.++++ +- ...|.
T Consensus 259 lgVDRLDytKGi~~rl~Afe~fL~~----~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~ 334 (474)
T PRK10117 259 FSVERLDYSKGLPERFLAYEALLEK----YPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLY 334 (474)
T ss_pred EEecccccccCHHHHHHHHHHHHHh----ChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEE
Confidence 3333334457787777766443432 4543 344443221 1 234444332 11 12344
Q ss_pred Eecc-c--hhHHHHHHhcchheecC---C-hhhHHHHHHhCCC-----EEEecCCCCccccchHHHHHCCceeeeC--CH
Q 012492 331 VRGF-E--TQMEKWMGACDCIITKA---G-PGTIAEALIRGLP-----IILNDYIPGQEKGNVPYVVDNGAGVFTR--SP 396 (462)
Q Consensus 331 ~~g~-~--~~~~~l~~~aD~vV~~s---g-~~t~~EAla~G~P-----vI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~ 396 (462)
++.- . +++..+|+.||+.+.+| | -.+.-|..+|..| +|++.+. +.+..| +.+++++ |.
T Consensus 335 y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefA-----GaA~~L---~~AllVNP~d~ 406 (474)
T PRK10117 335 YLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFA-----GAANEL---TSALIVNPYDR 406 (474)
T ss_pred EecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEeccc-----chHHHh---CCCeEECCCCH
Confidence 4322 1 67789999999977655 3 4567899999763 5555442 234445 2355554 79
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHH
Q 012492 397 KETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHD 439 (462)
Q Consensus 397 ~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~ 439 (462)
++++++|.+.|...++.|++-.+..++....+....=++.+.+
T Consensus 407 ~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~ 449 (474)
T PRK10117 407 DEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFIS 449 (474)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHH
Confidence 9999999999976777776666666677666555444443333
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.045 Score=53.24 Aligned_cols=255 Identities=14% Similarity=0.119 Sum_probs=131.2
Q ss_pred HHHHhhCCCEEEECCcc-----cchHHHHHHHHcCCCCCCeEEEEecCCCC-CC--cccccC--------CCcEEEEcCH
Q 012492 158 AGLMEYKPDIIISVHPL-----MQHIPLWVLKWQGLQKKVIFVTVITDLNT-CH--PTWFHP--------RVNRCYCPSK 221 (462)
Q Consensus 158 ~~l~~~kPDvVi~~~~~-----~~~~~~~~~~~~~~~~~iP~v~~~~d~~~-~~--~~~~~~--------~~d~~i~~s~ 221 (462)
..++.++||+|++.... ...+.++.+- .+ ..+|++.+.++-.. .+ ..+... ..|.++...+
T Consensus 71 ~~i~~fk~d~iv~~~~~~~~~~~~~~~~~a~l-~~--~~l~~~~w~te~p~~~~~~~~~~~~~~~~~~l~~fd~v~~~g~ 147 (373)
T COG4641 71 LYIREFKPDIIVNMSGDDQPDEESTIDLWAWL-KR--KCLPVIVWYTEDPYDTDIFSQVAEEQLARRPLFIFDNVLSFGG 147 (373)
T ss_pred HHHHhcCCcEEEEecccccccceehHHHHHHh-hc--CCcceEEEEeccchhhhhhhhhhHHHhhccccchhhhhhhccc
Confidence 56899999999987754 2222222221 11 37887766665310 00 011111 1122333333
Q ss_pred HH-HHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCC
Q 012492 222 EV-AKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETG 300 (462)
Q Consensus 222 ~~-~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~ 300 (462)
.. ...+.+.+. ..+...++.++++..+.+ ..++.. -+. -+.++|.... +..+.++++.-.-.. +
T Consensus 148 ~l~~~~yyq~~~-~~~~~~~~~a~d~~~~~~-i~~da~-------~~~-dL~~ign~~p--Dr~e~~ke~~~~ps~---k 212 (373)
T COG4641 148 GLVANKYYQEGG-ARNCYYLPWAVDDSLFHP-IPPDAS-------YDV-DLNLIGNPYP--DRVEEIKEFFVEPSF---K 212 (373)
T ss_pred hHHHHHHHHhhc-ccceeccCccCCchhccc-CCcccc-------cee-eeEEecCCCc--cHHHHHHHHhhccch---h
Confidence 33 445543332 245677788887766554 111110 001 1333433322 233344433211000 0
Q ss_pred CCCceEEEEccCCHHHHHHHhhccCCCCeEEeccc---hhHHHHHHhcchheec----------CChhhHHHHHHhCCCE
Q 012492 301 RPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFE---TQMEKWMGACDCIITK----------AGPGTIAEALIRGLPI 367 (462)
Q Consensus 301 ~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~---~~~~~l~~~aD~vV~~----------sg~~t~~EAla~G~Pv 367 (462)
....+...+.|.. +...+....+..++...|+. ..+...++.-|+.+-- +-.+-+-|+++||.|.
T Consensus 213 l~v~rr~~~~g~~--y~~~~~~~~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~l 290 (373)
T COG4641 213 LMVDRRFYVLGPR--YPDDIWGRTWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFL 290 (373)
T ss_pred hhccceeeecCCc--cchhhhcccccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCcc
Confidence 0110223344544 22222222345566666665 3455666666665421 1256689999999999
Q ss_pred EEecCCCCccccchHHHHHCCce-eeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcC--CcHHHHHHHHHHH
Q 012492 368 ILNDYIPGQEKGNVPYVVDNGAG-VFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQ--PEAVVDIVKDIHD 439 (462)
Q Consensus 368 I~~~~~~~~~~~n~~~l~~~G~g-~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~--~~~~~~ia~~i~~ 439 (462)
|..... -.+-+...|-. ++..|.+++.+.+..++ ++++.|+++++++.+.+. ....+++...+..
T Consensus 291 iT~~~~------~~e~~f~pgk~~iv~~d~kdl~~~~~yll-~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~ 358 (373)
T COG4641 291 ITDYWK------DLEKFFKPGKDIIVYQDSKDLKEKLKYLL-NHPDERKEIAECAYERVLARHTYEERIFKLLNE 358 (373)
T ss_pred ccccHH------HHHHhcCCchheEEecCHHHHHHHHHHHh-cCcchHHHHHHhhHHHHHHhccHHHHHHHHHHH
Confidence 886642 12223344543 44568999999999999 899999999999977653 2344555444433
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0045 Score=52.31 Aligned_cols=44 Identities=16% Similarity=0.135 Sum_probs=31.3
Q ss_pred HHHHHHHHhhCCCEEEECCcccchH-HHHHHHHcCCCCC-CeEEEEecCC
Q 012492 154 KEVEAGLMEYKPDIIISVHPLMQHI-PLWVLKWQGLQKK-VIFVTVITDL 201 (462)
Q Consensus 154 ~~l~~~l~~~kPDvVi~~~~~~~~~-~~~~~~~~~~~~~-iP~v~~~~d~ 201 (462)
.++.+++++.+||+||++.+..... +..+++. .+ +|+|...|+.
T Consensus 64 ~~l~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~----~~~~~~i~~~hg~ 109 (139)
T PF13477_consen 64 FRLRKIIKKEKPDVIHCHTPSPYGLFAMLAKKL----LKNKKVIYTVHGS 109 (139)
T ss_pred HHHHHHhccCCCCEEEEecCChHHHHHHHHHHH----cCCCCEEEEecCC
Confidence 4788999999999999998765333 2233343 34 8998777754
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.3 Score=54.00 Aligned_cols=262 Identities=12% Similarity=0.125 Sum_probs=136.4
Q ss_pred HHHHHHHHHHHHHHhhCC--CEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcc-----cc------cCCCc
Q 012492 148 MAAYYAKEVEAGLMEYKP--DIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPT-----WF------HPRVN 214 (462)
Q Consensus 148 ~~~~~~~~l~~~l~~~kP--DvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~-----~~------~~~~d 214 (462)
.+..++.++ ++..+| |+|-++.......|..+ |.+. ++.++-.+.|-..+.... |- .-.+|
T Consensus 186 vN~~FA~~v---~~~~~~~~d~VWVhDYhL~llP~~L-R~~~--~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aD 259 (854)
T PLN02205 186 VNKIFADRI---MEVINPEDDFVWIHDYHLMVLPTFL-RKRF--NRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSD 259 (854)
T ss_pred HHHHHHHHH---HHHhCCCCCEEEEeCchhhHHHHHH-HhhC--CCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCC
Confidence 344555544 455566 68877776665555433 4332 466666666654321110 10 12467
Q ss_pred EEEEcCHHHHHHHHH-----cCCCC-------------C--cEEEcCCCCChhhhccc-C------ChHHHHHHcCCCCC
Q 012492 215 RCYCPSKEVAKRASY-----FGLEV-------------S--QIRVFGLPIRPSFVRAV-I------SKDNLRLELQMDPI 267 (462)
Q Consensus 215 ~~i~~s~~~~~~l~~-----~gi~~-------------~--~i~v~g~pv~~~~~~~~-~------~~~~~r~~l~l~~~ 267 (462)
.+-..+...++-+.. .|+.. . +|.+.+.+|++..+... . ...+++++++- ++
T Consensus 260 lIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~ 338 (854)
T PLN02205 260 LIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCD-QD 338 (854)
T ss_pred eEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhcc-CC
Confidence 776666666655432 23321 1 23345556666543211 1 11244555531 13
Q ss_pred CcEEEEEeCCCC-CccHHHHHHHHHHhhhcccCCCCCc----eEEEEccCC----H---HHHHHHhh--------ccC--
Q 012492 268 LPAVLLMGGGEG-MGPVKETAMALGESLLDKETGRPIG----QLIIICGRN----R---TLASTLQS--------EEW-- 325 (462)
Q Consensus 268 ~~~iLv~gG~~~-~~~~~~~l~~l~~~l~~~~~~~~~~----~~lvv~G~~----~---~l~~~~~~--------~~~-- 325 (462)
++ +++....+. .+++.+-+.++-+.|.+ +|++ .++.++-+. . +++..+++ ++-
T Consensus 339 ~~-~ilgVDrlD~~KGi~~kl~A~e~~L~~----~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~ 413 (854)
T PLN02205 339 RI-MLLGVDDMDIFKGISLKLLAMEQLLMQ----HPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPG 413 (854)
T ss_pred CE-EEEEccCcccccCHHHHHHHHHHHHHh----CccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 33 444444444 57777777766444433 5654 344443221 1 23333322 121
Q ss_pred CCCeEEecc-c--hhHHHHHHhcchheecC---C-hhhHHHHHHhCCC-------------------EEEecCCCCcccc
Q 012492 326 KIPVKVRGF-E--TQMEKWMGACDCIITKA---G-PGTIAEALIRGLP-------------------IILNDYIPGQEKG 379 (462)
Q Consensus 326 ~~~V~~~g~-~--~~~~~l~~~aD~vV~~s---g-~~t~~EAla~G~P-------------------vI~~~~~~~~~~~ 379 (462)
...|+++.- . +++..+|+.||+++.+| | -.+..|..+|..+ +|++.+ .+
T Consensus 414 ~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEf-----aG 488 (854)
T PLN02205 414 YDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEF-----IG 488 (854)
T ss_pred CceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeec-----cc
Confidence 134665532 2 68889999999987666 3 3467898888642 333333 22
Q ss_pred chHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcH
Q 012492 380 NVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLAQPEA 429 (462)
Q Consensus 380 n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~ 429 (462)
.+..| .| ++.++ |.++++++|.+.|...++.++.-.++.+++...+.
T Consensus 489 aa~~L--~~-Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d 537 (854)
T PLN02205 489 CSPSL--SG-AIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHD 537 (854)
T ss_pred hhHHh--Cc-CeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCC
Confidence 33444 23 45554 79999999999986566555555555566665443
|
|
| >COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.22 Score=49.96 Aligned_cols=219 Identities=14% Similarity=0.095 Sum_probs=123.4
Q ss_pred CcEEEEcCHHHHHHHHH-cCCCCCcEEEcCCCCChhhhcccCCh---HHHHHHcCCCCCCcEEEEEeCCCCCc------c
Q 012492 213 VNRCYCPSKEVAKRASY-FGLEVSQIRVFGLPIRPSFVRAVISK---DNLRLELQMDPILPAVLLMGGGEGMG------P 282 (462)
Q Consensus 213 ~d~~i~~s~~~~~~l~~-~gi~~~~i~v~g~pv~~~~~~~~~~~---~~~r~~l~l~~~~~~iLv~gG~~~~~------~ 282 (462)
.|.+.+.++.......+ .++.+.++..+|.|-...+....... ......++++.++++|+...--.+.. .
T Consensus 149 ~dy~~~~~~~~~~if~~~f~~~~~~i~~~G~Pr~D~~~~~~~~~~~~~~~~~~~~~~~~k~vIlyaPTfr~~~~~~~~~~ 228 (388)
T COG1887 149 WDYLISPNPESTAIFAEAFNIDKENILETGYPRNDKLFDEAGKTEDILLIQLALPLPQDKKVILYAPTFRDNDVLIGTQF 228 (388)
T ss_pred eeeeeeCChhhHHHHHHHhcccccceeecCcccchhhhhhccchhhhHHHhhhcCCcccCceEEecCCccCCccccchhh
Confidence 35566666666555343 47778899999999877555432111 12345567777788777754322222 1
Q ss_pred HHHH--HHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhc-cCCCCeEEeccchhHHHHHHhcchheecCChhhHHH
Q 012492 283 VKET--AMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSE-EWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAE 359 (462)
Q Consensus 283 ~~~~--l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~-~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~E 359 (462)
.... ..++.+.+.+ .++. ++.-..+......... ...+.+..+....++.++|..+|++|+. ...+..|
T Consensus 229 ~~~~~~~~~~~~~l~~-----~~~~--ii~k~Hp~is~~~~~~~~~~~~~~~vs~~~di~dll~~sDiLITD-ySSv~fd 300 (388)
T COG1887 229 FNLDIDIEKLKEKLGE-----NEYV--IIVKPHPLISDKIDKRYALDDFVLDVSDNADINDLLLVSDILITD-YSSVIFD 300 (388)
T ss_pred hhhhhhHHHHHHhhcc-----CCeE--EEEecChhhhhhhhhhhhccceeEecccchhHHHHHhhhCEEEee-chHHHHH
Confidence 1111 1222222221 2333 3333333222222111 1222233343356899999999999995 4468999
Q ss_pred HHHhCCCEEEecCCCCcc---ccchHHHHHCCceeeeCCHHHHHHHHHHHhcC---CHHHHHHHHHHHHhhcCCcHHHHH
Q 012492 360 ALIRGLPIILNDYIPGQE---KGNVPYVVDNGAGVFTRSPKETARIVTEWFST---KTDELKRMSENALKLAQPEAVVDI 433 (462)
Q Consensus 360 Ala~G~PvI~~~~~~~~~---~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~---d~~~~~~m~~~a~~~~~~~~~~~i 433 (462)
+|.+.+|||..-....+. .+-........-|-++.+..++.++|...+.. +.+.++...+...++....+++++
T Consensus 301 f~~l~KPiify~~D~~~y~~~rg~~~d~~~~~Pg~~~~~~~~li~ai~~~~~~~~~~~~k~~~~~~~~~~~~dg~ss~ri 380 (388)
T COG1887 301 FMLLDKPIIFYTYDLEQYDELRGFYLDYKFEAPGEVVETQEELIDAIKPYDEDGNYDLEKLRVFNDKFNSYEDGRSSERI 380 (388)
T ss_pred HHHhcCcEEEEecChHHHHhhhhhhhhHHhcCCccccccHHHHHHHHHhhhcccchhHHHHHHHHHhhcccccccHHHHH
Confidence 999999999986532111 11111223334566777888888888887721 234444555555555566788888
Q ss_pred HHHHHH
Q 012492 434 VKDIHD 439 (462)
Q Consensus 434 a~~i~~ 439 (462)
++.+.+
T Consensus 381 ~~~i~~ 386 (388)
T COG1887 381 LKLIFK 386 (388)
T ss_pred HHHHhc
Confidence 877654
|
|
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.15 Score=47.74 Aligned_cols=101 Identities=13% Similarity=0.075 Sum_probs=54.3
Q ss_pred CCCcEEEEEeCCCC-Ccc-HHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhc--cC-CCCeEEeccc--hhH
Q 012492 266 PILPAVLLMGGGEG-MGP-VKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSE--EW-KIPVKVRGFE--TQM 338 (462)
Q Consensus 266 ~~~~~iLv~gG~~~-~~~-~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~--~~-~~~V~~~g~~--~~~ 338 (462)
.++++|++..|+.. .+. -.+.+.++++.|.+. ..++++++|..+...+..+.. +. ...+.+.|-. .++
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~-----~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~ 177 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKER-----GYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLREL 177 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCC-----T-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHH
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHhh-----CceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHH
Confidence 45566666554433 332 234455677777542 245554444433122222221 11 1256666654 688
Q ss_pred HHHHHhcchheecCChhhHHHHHHhCCCEEEecC
Q 012492 339 EKWMGACDCIITKAGPGTIAEALIRGLPIILNDY 372 (462)
Q Consensus 339 ~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~ 372 (462)
..+++.||++|+.-.| .+-=|.++|+|+|+.-.
T Consensus 178 ~ali~~a~~~I~~Dtg-~~HlA~a~~~p~v~lfg 210 (247)
T PF01075_consen 178 AALISRADLVIGNDTG-PMHLAAALGTPTVALFG 210 (247)
T ss_dssp HHHHHTSSEEEEESSH-HHHHHHHTT--EEEEES
T ss_pred HHHHhcCCEEEecCCh-HHHHHHHHhCCEEEEec
Confidence 8999999999997654 34668999999999854
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.32 E-value=1.5 Score=44.84 Aligned_cols=275 Identities=15% Similarity=0.127 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCC------Cccc---c--cCCCcEE
Q 012492 148 MAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTC------HPTW---F--HPRVNRC 216 (462)
Q Consensus 148 ~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~------~~~~---~--~~~~d~~ 216 (462)
.+..++.++.+..+.. |+|-++.......|. +.|.++ ++.++..++|-..+. .|.+ + --.+|.+
T Consensus 133 vN~~FAd~i~~~~~~g--DiIWVhDYhL~L~P~-mlR~~~--~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dli 207 (486)
T COG0380 133 VNRKFADKIVEIYEPG--DIIWVHDYHLLLVPQ-MLRERI--PDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLI 207 (486)
T ss_pred HHHHHHHHHHHhcCCC--CEEEEEechhhhhHH-HHHHhC--CCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCee
Confidence 4556666654444333 666666555444443 344433 344444455533211 1111 0 1235666
Q ss_pred EEcCHHHHHHHHH----c-C------CC-----C--CcEEEcCCCCChhhhcccC-------ChHHHHHHcCCCCCCcEE
Q 012492 217 YCPSKEVAKRASY----F-G------LE-----V--SQIRVFGLPIRPSFVRAVI-------SKDNLRLELQMDPILPAV 271 (462)
Q Consensus 217 i~~s~~~~~~l~~----~-g------i~-----~--~~i~v~g~pv~~~~~~~~~-------~~~~~r~~l~l~~~~~~i 271 (462)
-..++..++-+.. . + +. . .++..++.++++..+.... .-.++++.++- ++.++
T Consensus 208 gFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~--~~kii 285 (486)
T COG0380 208 GFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGR--NKKLI 285 (486)
T ss_pred EecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcC--CceEE
Confidence 5666655554422 1 1 10 1 2345566677775443211 12345555532 24433
Q ss_pred EEEeCCCCCccHHHHHHHHHHhhhcccCCCCCc----eEEEEccCCH----H---HHHHHhhc-----------cCCCCe
Q 012492 272 LLMGGGEGMGPVKETAMALGESLLDKETGRPIG----QLIIICGRNR----T---LASTLQSE-----------EWKIPV 329 (462)
Q Consensus 272 Lv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~----~~lvv~G~~~----~---l~~~~~~~-----------~~~~~V 329 (462)
+-+-+..-.+++.+-+.++-+.|.+ +|++ .++.++-... + ++..++++ ++ ..|
T Consensus 286 vgvDRlDy~kGi~~rl~Afe~lL~~----~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~-~Pv 360 (486)
T COG0380 286 VGVDRLDYSKGIPQRLLAFERLLEE----YPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSW-TPV 360 (486)
T ss_pred EEehhcccccCcHHHHHHHHHHHHh----ChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCc-cee
Confidence 3333334456677666666444433 4543 3344442221 1 23333321 12 345
Q ss_pred EEecc-c--hhHHHHHHhcchheecC---C-hhhHHHHHHhCC----CEEEecCCCCccccchHHHHHCCceeeeC--CH
Q 012492 330 KVRGF-E--TQMEKWMGACDCIITKA---G-PGTIAEALIRGL----PIILNDYIPGQEKGNVPYVVDNGAGVFTR--SP 396 (462)
Q Consensus 330 ~~~g~-~--~~~~~l~~~aD~vV~~s---g-~~t~~EAla~G~----PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~ 396 (462)
.++-- . +++..+|..||+.+.+| | -.+..|..+|.- |.|++.+.+ .+..|. + +++++ |.
T Consensus 361 ~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaG-----aa~~L~--~-AliVNP~d~ 432 (486)
T COG0380 361 HYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAG-----AASELR--D-ALIVNPWDT 432 (486)
T ss_pred EEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEecccc-----chhhhc--c-CEeECCCCh
Confidence 54433 2 57889999999977655 3 556788888755 566665532 333442 3 55555 68
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHh
Q 012492 397 KETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 397 ~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~ 442 (462)
++++++|.+.|...++.+++--+...+....+.+.+.++.+++-+.
T Consensus 433 ~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la 478 (486)
T COG0380 433 KEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLA 478 (486)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 9999999999977777776666666666666666666666554443
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=95.57 E-value=1.8 Score=41.67 Aligned_cols=167 Identities=8% Similarity=-0.046 Sum_probs=87.5
Q ss_pred CCCeEEEEecCCCCCCc---c----cccCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHc
Q 012492 190 KKVIFVTVITDLNTCHP---T----WFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLEL 262 (462)
Q Consensus 190 ~~iP~v~~~~d~~~~~~---~----~~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l 262 (462)
.+.|++.+-....+... + +..+.+|.+.+-.+...+.+.+.|+ ++.+.+-++ +.-.......
T Consensus 98 ~~k~~~~~g~giGP~~~~~~r~~~~~~l~~~~~i~vRD~~S~~~l~~~g~---~i~~~~D~a---~~l~~~~~~~----- 166 (298)
T TIGR03609 98 FGKPVILWGQGIGPLRRRLSRWLVRRVLRGCRAISVRDAASYRLLKRLGI---PAELAADPV---WLLPPEPWPG----- 166 (298)
T ss_pred cCCCEEEEecccCCcCCHHHHHHHHHHHccCCEEEEeCHHHHHHHHHhCC---CceEeCChh---hhCCCCcccc-----
Confidence 47888777665543221 1 2346678888888888888777787 366655332 2211011000
Q ss_pred CCCCCCcEEEEEeCCCCC--ccHHHHHHHHHHhhhcccCCCCCceEEEEcc--CCH-HHHHHHhh-ccCCCCeEEeccch
Q 012492 263 QMDPILPAVLLMGGGEGM--GPVKETAMALGESLLDKETGRPIGQLIIICG--RNR-TLASTLQS-EEWKIPVKVRGFET 336 (462)
Q Consensus 263 ~l~~~~~~iLv~gG~~~~--~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G--~~~-~l~~~~~~-~~~~~~V~~~g~~~ 336 (462)
....+++.+.+..+.... ....+.+..+++.+.++ .+.+++++.. ..+ +..+.+.+ +.....+......+
T Consensus 167 ~~~~~~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~----~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~ 242 (298)
T TIGR03609 167 GEPLPEPVIVVSLRPWPLLDVSRLLRLLRALDRLQRD----TGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPE 242 (298)
T ss_pred cccCCCCeEEEEECCCCcCCHHHHHHHHHHHHHHHHh----hCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHH
Confidence 011234567776655322 11222223333444331 2344444332 222 22233322 11122232112235
Q ss_pred hHHHHHHhcchheecCChhhHHHHHHhCCCEEEecC
Q 012492 337 QMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDY 372 (462)
Q Consensus 337 ~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~ 372 (462)
++..+++.||++|+..- ..++=|+.+|+|+|...+
T Consensus 243 e~~~~i~~~~~vI~~Rl-H~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 243 ELLGLFASARLVIGMRL-HALILAAAAGVPFVALSY 277 (298)
T ss_pred HHHHHHhhCCEEEEech-HHHHHHHHcCCCEEEeec
Confidence 78889999999999655 456889999999998865
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.49 Score=42.10 Aligned_cols=162 Identities=15% Similarity=0.053 Sum_probs=79.9
Q ss_pred CCeEEEEec----C-CCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCC
Q 012492 62 TKNVLILMS----D-TGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTS 136 (462)
Q Consensus 62 ~~kIli~~~----~-~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~ 136 (462)
|+||+|++. + -| |-++.+..|+..|.++|+ .+.|++..-. .+. . +..|+. ..+.......
T Consensus 1 mkkIaIiGtrGIPa~YG-GfET~ve~L~~~l~~~g~-~v~Vyc~~~~---~~~--~--~~~y~g----v~l~~i~~~~-- 65 (185)
T PF09314_consen 1 MKKIAIIGTRGIPARYG-GFETFVEELAPRLVSKGI-DVTVYCRSDY---YPY--K--EFEYNG----VRLVYIPAPK-- 65 (185)
T ss_pred CceEEEEeCCCCCcccC-cHHHHHHHHHHHHhcCCc-eEEEEEccCC---CCC--C--CcccCC----eEEEEeCCCC--
Confidence 689999972 2 55 999999999999998875 3455543211 110 0 111211 0111111111
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHh--hCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCccc------
Q 012492 137 PKWIHSCYLAAMAAYYAKEVEAGLME--YKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTW------ 208 (462)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~l~~--~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~------ 208 (462)
.+.+.++...+.+...+ ..+.+. .+.|+|+..+.......+...+.... .+.|+++-.+...=.-..|
T Consensus 66 ~g~~~si~yd~~sl~~a---l~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~-~g~~v~vN~DGlEWkR~KW~~~~k~ 141 (185)
T PF09314_consen 66 NGSAESIIYDFLSLLHA---LRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRK-KGGKVVVNMDGLEWKRAKWGRPAKK 141 (185)
T ss_pred CCchHHHHHHHHHHHHH---HHHHhhccccCCEEEEEcCCccHHHHHHHHhhhh-cCCcEEECCCcchhhhhhcCHHHHH
Confidence 11233333322222222 122333 36788876664422222333333211 2568775444322011122
Q ss_pred --------ccCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCC
Q 012492 209 --------FHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLP 243 (462)
Q Consensus 209 --------~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~p 243 (462)
..+.+|.+++-|+...+.+.+..- ..+..+++++
T Consensus 142 ~lk~~E~~avk~ad~lIaDs~~I~~y~~~~y~-~~~s~~IaYG 183 (185)
T PF09314_consen 142 YLKFSEKLAVKYADRLIADSKGIQDYIKERYG-RKKSTFIAYG 183 (185)
T ss_pred HHHHHHHHHHHhCCEEEEcCHHHHHHHHHHcC-CCCcEEecCC
Confidence 125689999999999888875421 3345555544
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.15 Score=48.44 Aligned_cols=46 Identities=20% Similarity=0.241 Sum_probs=36.3
Q ss_pred CCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecC
Q 012492 326 KIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDY 372 (462)
Q Consensus 326 ~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~ 372 (462)
..++.+....-++.+++..||.+|+-.+ .+-+||+.+|+||++...
T Consensus 181 ~~~~~~~~~~~~~~~Ll~~s~~VvtinS-tvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 181 LPNVVIIDDDVNLYELLEQSDAVVTINS-TVGLEALLHGKPVIVFGR 226 (269)
T ss_pred CCCeEEECCCCCHHHHHHhCCEEEEECC-HHHHHHHHcCCceEEecC
Confidence 3456665555578999999999998554 467999999999999764
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis | Back alignment and domain information |
|---|
Probab=95.10 E-value=2.8 Score=39.10 Aligned_cols=171 Identities=13% Similarity=0.100 Sum_probs=85.0
Q ss_pred CCCeEEEEecCCCCCCc-------ccccCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHc
Q 012492 190 KKVIFVTVITDLNTCHP-------TWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLEL 262 (462)
Q Consensus 190 ~~iP~v~~~~d~~~~~~-------~~~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l 262 (462)
.++|++.+-....+... ..+.+.++.+.+-.+...+.+.+.|++. ++.+++-+. |...+..+......
T Consensus 98 ~~~pv~~~g~g~gp~~~~~~~~~~~~~l~~~~~i~vRD~~S~~~l~~~g~~~-~~~~~~D~a---f~l~~~~~~~~~~~- 172 (286)
T PF04230_consen 98 LGKPVIILGQGIGPFRSEEFKKLLRRILSKADYISVRDEYSYELLKKLGISG-NVKLVPDPA---FLLPPSYPDEDKSK- 172 (286)
T ss_pred cCCCeEEECceECccCCHHHHHHHHHHHhCCCEEEECCHHHHHHHHHcCCCC-CcEEEeCch---hhcCcccccccccc-
Confidence 48898876554421111 1223457888888888887777788876 777777554 21111111110000
Q ss_pred CCCCCCcEEEEEeCCC-CCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH-HHHHHHhh----ccCCCCeEEecc--
Q 012492 263 QMDPILPAVLLMGGGE-GMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR-TLASTLQS----EEWKIPVKVRGF-- 334 (462)
Q Consensus 263 ~l~~~~~~iLv~gG~~-~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~-~l~~~~~~----~~~~~~V~~~g~-- 334 (462)
.....+.+..... ......+.+..+.+.+.+. .....++....... ........ .....++.....
T Consensus 173 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (286)
T PF04230_consen 173 ---PKRNYISVSNSPSRNNEEYIEEIAELIQRLLDK---GYKIVLLPFSPSDDDEDDDDFNEIDIKAEKFFNVIIIDYSL 246 (286)
T ss_pred ---cccceeeeccccchhhhhHHHHHHHHHHHhhcc---cceeEEEEeeeccchhhHHHHHhhhhhcccccceeEecCCC
Confidence 0111122211111 1222333333333443331 11223333333222 11111110 222233333322
Q ss_pred -chhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecC
Q 012492 335 -ETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDY 372 (462)
Q Consensus 335 -~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~ 372 (462)
..++.++++.||++|+..-. .++=|+++|+|+|....
T Consensus 247 ~~~~~~~~~~~~~~~Is~RlH-~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 247 SPDELLELISQADLVISMRLH-GAILALSLGVPVIAISY 284 (286)
T ss_pred CHHHHHHHHhcCCEEEecCCH-HHHHHHHcCCCEEEEec
Confidence 36888999999999997664 45779999999999864
|
CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ]. |
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.048 Score=45.99 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=26.9
Q ss_pred EEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEE
Q 012492 65 VLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVK 100 (462)
Q Consensus 65 Ili~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~ 100 (462)
|+|.+.++ .||..+..+|+++|+++|| +|.+.
T Consensus 1 Ili~~~Gt-~Ghv~P~lala~~L~~rGh---~V~~~ 32 (139)
T PF03033_consen 1 ILIATGGT-RGHVYPFLALARALRRRGH---EVRLA 32 (139)
T ss_dssp EEEEEESS-HHHHHHHHHHHHHHHHTT----EEEEE
T ss_pred CEEEEcCC-hhHHHHHHHHHHHHhccCC---eEEEe
Confidence 78999999 5999999999999999997 55444
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=94.74 E-value=4.9 Score=39.90 Aligned_cols=212 Identities=13% Similarity=0.084 Sum_probs=107.4
Q ss_pred CCCeEEEEecCCCC-CCc--ccc----cCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHc
Q 012492 190 KKVIFVTVITDLNT-CHP--TWF----HPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLEL 262 (462)
Q Consensus 190 ~~iP~v~~~~d~~~-~~~--~~~----~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l 262 (462)
.+.|++.+-+...+ .|+ +|+ .+.+..+.+-.+...+.+...|++.. .+. ++.|.-+...++.-.. .
T Consensus 123 ~~kp~~~~g~svGP~~~~~s~~~~~~~~~~~s~i~vRD~~S~~llk~~gi~a~--l~~----D~Af~L~~~~~~~~~~-~ 195 (385)
T COG2327 123 AGKPTFFFGQSVGPLKHPLSRQLLNYVLGGCSAISVRDPVSYELLKQLGINAR--LVT----DPAFLLPASSQNATAS-D 195 (385)
T ss_pred cCCCEEEEeccCCCccCHHHHHHHHHHhcCCcEEEEecHHhHHHHHHcCCCeE--eec----Ccceeccccccccccc-c
Confidence 37898887766543 222 232 34567788888888888887788632 222 3333321111110000 0
Q ss_pred CCCCCCcEEEEEeCCCCCcc-----HHHHHHHHHHhhhcccCCCCCceEEEEccCCHH---HHHHHhhc-cCCCCeEEec
Q 012492 263 QMDPILPAVLLMGGGEGMGP-----VKETAMALGESLLDKETGRPIGQLIIICGRNRT---LASTLQSE-EWKIPVKVRG 333 (462)
Q Consensus 263 ~l~~~~~~iLv~gG~~~~~~-----~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~---l~~~~~~~-~~~~~V~~~g 333 (462)
+ ....+.+.++...+...+ +.+.+.++++.+... ....+.+..+.+...+ ..+.+..+ ....++.+..
T Consensus 196 ~-~~~~~~~~i~lr~~~~~~t~~~~~~~~v~~~l~~~~~~--~~~~~~i~~~~~~~s~d~~va~~ia~~~~~~~~i~~~~ 272 (385)
T COG2327 196 V-EAREKTVAITLRGLHPDNTAQRSILKYVNEALDLVERQ--VKALWRITLIDYGASDDLAVADAIAQLVLDSAEILVSS 272 (385)
T ss_pred c-ccccceEEEEecccCCchhhhHHHHHHHHHHHHHHHHh--hhcceEEEeeeccccchhHHHHHHHhhcCCccceEeec
Confidence 1 122345666554432211 112223333322111 1234443333333221 22222222 1124555542
Q ss_pred --cchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCce-eeeC----CHHHHHHHHHHH
Q 012492 334 --FETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAG-VFTR----SPKETARIVTEW 406 (462)
Q Consensus 334 --~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g-~~~~----~~~~la~~i~~l 406 (462)
+.+++...++.||++|.. ...+++=|+++|+|+|...+.+ .....+.+.|.. +..+ +.+.+...+.+.
T Consensus 273 d~~~~~~~~~l~~~dl~Vg~-R~HsaI~al~~g~p~i~i~Y~~----K~~~l~~~~gl~~~~~~i~~~~~~~l~~~~~e~ 347 (385)
T COG2327 273 DEYAEELGGILAACDLIVGM-RLHSAIMALAFGVPAIAIAYDP----KVRGLMQDLGLPGFAIDIDPLDAEILSAVVLER 347 (385)
T ss_pred chHHHHHHHHhccCceEEee-hhHHHHHHHhcCCCeEEEeecH----HHHHHHHHcCCCcccccCCCCchHHHHHHHHHH
Confidence 224566788999999984 4456788999999999998743 233455556653 3222 456666666666
Q ss_pred hcCCHHHHHH
Q 012492 407 FSTKTDELKR 416 (462)
Q Consensus 407 l~~d~~~~~~ 416 (462)
+.++++.+++
T Consensus 348 ~~~~~~~~~~ 357 (385)
T COG2327 348 LTKLDELRER 357 (385)
T ss_pred HhccHHHHhh
Confidence 6466776554
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=94.35 E-value=2.4 Score=45.16 Aligned_cols=170 Identities=10% Similarity=0.058 Sum_probs=97.8
Q ss_pred CCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccC-CCCCceEEEEccCCH-------HHHHHHhhc----cCCCCeEE
Q 012492 264 MDPILPAVLLMGGGEGMGPVKETAMALGESLLDKET-GRPIGQLIIICGRNR-------TLASTLQSE----EWKIPVKV 331 (462)
Q Consensus 264 l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~-~~~~~~~lvv~G~~~-------~l~~~~~~~----~~~~~V~~ 331 (462)
++++.+++.++.+...+| ..+++...++.+.+... ...++++ |+.|.+. ++.+.+.++ ....+|.|
T Consensus 385 ~dpd~~~ig~v~Rl~~yK-r~dLil~~i~~l~~i~~~~~~pvq~-V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f 462 (601)
T TIGR02094 385 LDPDVLTIGFARRFATYK-RADLIFRDLERLARILNNPERPVQI-VFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVF 462 (601)
T ss_pred cCCCCcEEEEEEcchhhh-hHHHHHHHHHHHHHHhhCCCCCeEE-EEEEecCcccchHHHHHHHHHHHHhcccCCCCEEE
Confidence 456666555554444444 34444444444432100 0124665 4566653 244444433 24457776
Q ss_pred -eccchhHH-HHHHhcchhee-cCC-----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC---------
Q 012492 332 -RGFETQME-KWMGACDCIIT-KAG-----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--------- 394 (462)
Q Consensus 332 -~g~~~~~~-~l~~~aD~vV~-~sg-----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--------- 394 (462)
.+|-..+. .+++.||+++. |+. |.+=|-||..|.+.+.+-.+-..+. . +.+.|+...
T Consensus 463 ~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~-----~-~~~nGf~f~~~~~~~~~~ 536 (601)
T TIGR02094 463 LENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEG-----Y-DGDNGWAIGDGEEYDDEE 536 (601)
T ss_pred EcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCccccc-----C-CCCcEEEECCCccccccc
Confidence 47765555 57799999987 552 7778999999999998764311111 1 235566554
Q ss_pred -----CHHHHHHHHHHHh----cCC-----HHHHHHHHHHHHh-hcCCcHHHHHHHHHHHHH
Q 012492 395 -----SPKETARIVTEWF----STK-----TDELKRMSENALK-LAQPEAVVDIVKDIHDLA 441 (462)
Q Consensus 395 -----~~~~la~~i~~ll----~~d-----~~~~~~m~~~a~~-~~~~~~~~~ia~~i~~l~ 441 (462)
+.+++.++|++.+ .++ |+...+|.+++-+ .+..++|.+.++...++.
T Consensus 537 ~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 537 EQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred cccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 4566666665433 122 4456667666654 355799999999887753
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=94.00 E-value=2.6 Score=39.09 Aligned_cols=45 Identities=20% Similarity=0.212 Sum_probs=30.3
Q ss_pred HHHHHHHHHhhCCCEEE-ECCcccchHHHHHHHHcCCCCCCeEEEEe
Q 012492 153 AKEVEAGLMEYKPDIII-SVHPLMQHIPLWVLKWQGLQKKVIFVTVI 198 (462)
Q Consensus 153 ~~~l~~~l~~~kPDvVi-~~~~~~~~~~~~~~~~~~~~~~iP~v~~~ 198 (462)
...|.+++++++.|++| .+||+...+.-.+++.... .+||.+.+.
T Consensus 55 ~e~l~~~l~e~~i~llIDATHPyAa~iS~Na~~aake-~gipy~r~e 100 (257)
T COG2099 55 AEGLAAFLREEGIDLLIDATHPYAARISQNAARAAKE-TGIPYLRLE 100 (257)
T ss_pred HHHHHHHHHHcCCCEEEECCChHHHHHHHHHHHHHHH-hCCcEEEEE
Confidence 44667889999999998 6778866553333322111 489998754
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=93.39 E-value=5.8 Score=37.36 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=27.5
Q ss_pred HHHHHHhhCCCEEE-ECCcccchHHHHHHHHcCCCCCCeEEEEec
Q 012492 156 VEAGLMEYKPDIII-SVHPLMQHIPLWVLKWQGLQKKVIFVTVIT 199 (462)
Q Consensus 156 l~~~l~~~kPDvVi-~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~ 199 (462)
+.+++++.++|+|| .+||+...+.-.+.+... ..++|++-+.-
T Consensus 57 l~~~l~~~~i~~VIDAtHPfA~~is~~a~~a~~-~~~ipylR~eR 100 (256)
T TIGR00715 57 LREFLKRHSIDILVDATHPFAAQITTNATAVCK-ELGIPYVRFER 100 (256)
T ss_pred HHHHHHhcCCCEEEEcCCHHHHHHHHHHHHHHH-HhCCcEEEEEC
Confidence 56789999999887 677876554322222111 15899987653
|
This enzyme was found to be a monomer by gel filtration. |
| >TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2 | Back alignment and domain information |
|---|
Probab=90.41 E-value=9.7 Score=33.69 Aligned_cols=45 Identities=29% Similarity=0.412 Sum_probs=30.1
Q ss_pred eEEeccchhHHHHHHhcchhee-cCChhhHHHH---HH------hCCCEEEecCC
Q 012492 329 VKVRGFETQMEKWMGACDCIIT-KAGPGTIAEA---LI------RGLPIILNDYI 373 (462)
Q Consensus 329 V~~~g~~~~~~~l~~~aD~vV~-~sg~~t~~EA---la------~G~PvI~~~~~ 373 (462)
+.+..+.+....++..||++|. ++|.+|+-|. +. ..+|+++.+..
T Consensus 81 i~~~~~~~Rk~~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n~~ 135 (178)
T TIGR00730 81 IEVNGMHERKAMMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFNVN 135 (178)
T ss_pred EEECCHHHHHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEECCc
Confidence 3343444455578889999775 5557787664 33 29999998753
|
This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=89.05 E-value=16 Score=40.17 Aligned_cols=170 Identities=11% Similarity=0.043 Sum_probs=90.3
Q ss_pred CCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccC-CCCCceEEEEccCCH-------HHHHHHhhc----cCCCCeEE
Q 012492 264 MDPILPAVLLMGGGEGMGPVKETAMALGESLLDKET-GRPIGQLIIICGRNR-------TLASTLQSE----EWKIPVKV 331 (462)
Q Consensus 264 l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~-~~~~~~~lvv~G~~~-------~l~~~~~~~----~~~~~V~~ 331 (462)
++++.+++. +.++....+..+++....+.+.+..+ ...++++ |+.|+.. ++.+.+.++ ....+|.|
T Consensus 474 ldpd~ltig-farRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~-IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvf 551 (778)
T cd04299 474 LDPNVLTIG-FARRFATYKRATLLLRDPERLKRLLNDPERPVQF-IFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVF 551 (778)
T ss_pred cCCCccEEe-eeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEE-EEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEE
Confidence 345544443 34455443434443333333322110 0123665 4567653 233444332 33457776
Q ss_pred e-ccchhHH-HHHHhcchheecCC------hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeCC--------
Q 012492 332 R-GFETQME-KWMGACDCIITKAG------PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRS-------- 395 (462)
Q Consensus 332 ~-g~~~~~~-~l~~~aD~vV~~sg------~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~-------- 395 (462)
+ +|-..+. .+++.||+.+.+|. |.+=|-|+..|.+-+.+-.+--.+. -+.+.|+.+.+
T Consensus 552 le~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~------~~g~nGwaig~~~~~~~~~ 625 (778)
T cd04299 552 LEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEG------YDGENGWAIGDGDEYEDDE 625 (778)
T ss_pred EcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCccccc------cCCCCceEeCCCccccChh
Confidence 4 6655555 57789999987653 6677899999999998775311111 01234554432
Q ss_pred ------HHHHHHHHHH----HhcC-----CHHHHHHHHHHH-HhhcCCcHHHHHHHHHHHHH
Q 012492 396 ------PKETARIVTE----WFST-----KTDELKRMSENA-LKLAQPEAVVDIVKDIHDLA 441 (462)
Q Consensus 396 ------~~~la~~i~~----ll~~-----d~~~~~~m~~~a-~~~~~~~~~~~ia~~i~~l~ 441 (462)
.+++-+.++. +.-+ .|....+|.+++ ...+..+++.++++...+-+
T Consensus 626 ~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 626 YQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred hcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 3333344432 2212 255565666555 44566789998888876633
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=86.45 E-value=13 Score=35.10 Aligned_cols=96 Identities=19% Similarity=0.171 Sum_probs=55.9
Q ss_pred CCCCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcch
Q 012492 60 ERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKW 139 (462)
Q Consensus 60 ~~~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 139 (462)
+..++|+|+=+|+| | +.+.+++.++-|+...+|+.|... .||..+.-+.
T Consensus 3 ~~~~~IgvFDSGVG-G-----LsVlrei~~~LP~e~~iY~~D~a~--~PYG~ks~e~----------------------- 51 (269)
T COG0796 3 EPQPPIGVFDSGVG-G-----LSVLREIRRQLPDEDIIYVGDTAR--FPYGEKSEEE----------------------- 51 (269)
T ss_pred ccCCeEEEEECCCC-c-----HHHHHHHHHHCCCCcEEEEecCCC--CCCCCCCHHH-----------------------
Confidence 34578999999996 4 345566666666666888887431 1222111000
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEe
Q 012492 140 IHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVI 198 (462)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~ 198 (462)
-..+..++...+.+..++++|.-....+..++-.+|.+ .++|+|.++
T Consensus 52 ---------I~~~~~~i~~~l~~~~ik~lVIACNTASa~al~~LR~~---~~iPVvGvi 98 (269)
T COG0796 52 ---------IRERTLEIVDFLLERGIKALVIACNTASAVALEDLREK---FDIPVVGVI 98 (269)
T ss_pred ---------HHHHHHHHHHHHHHcCCCEEEEecchHHHHHHHHHHHh---CCCCEEEec
Confidence 01223344555666669988755444444444455543 489999876
|
|
| >PRK13195 pyrrolidone-carboxylate peptidase; Provisional | Back alignment and domain information |
|---|
Probab=86.41 E-value=2.2 Score=39.14 Aligned_cols=29 Identities=14% Similarity=0.069 Sum_probs=23.2
Q ss_pred CCeEEEEe-cCCCchHHHHHHHHHHHHhhh
Q 012492 62 TKNVLILM-SDTGGGHRASAEAIRDAFKIE 90 (462)
Q Consensus 62 ~~kIli~~-~~~G~Gh~~~a~aLa~~L~~~ 90 (462)
|||||+++ ...|+--..++..+++.|...
T Consensus 1 m~~ILvTGF~PFgg~~~NPS~~~v~~L~~~ 30 (222)
T PRK13195 1 MSKVLVTGFGPYGVTPVNPAQLTAEELDGR 30 (222)
T ss_pred CCEEEEeeecCCCCCCcCchHHHHHhcccc
Confidence 68999998 558755688899999999754
|
|
| >PF00551 Formyl_trans_N: Formyl transferase; InterPro: IPR002376 A number of formyl transferases belong to this group | Back alignment and domain information |
|---|
Probab=85.24 E-value=6 Score=35.06 Aligned_cols=27 Identities=19% Similarity=0.255 Sum_probs=21.1
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCC
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGD 93 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~ 93 (462)
|||+|++++.| ..+..+.+++.+.++.
T Consensus 1 mrI~~~~Sg~~----~~~~~~l~~l~~~~~~ 27 (181)
T PF00551_consen 1 MRIVFFGSGSG----SFLKALLEALKARGHN 27 (181)
T ss_dssp EEEEEEESSSS----HHHHHHHHHHHTTSSE
T ss_pred CEEEEEEcCCC----HHHHHHHHHHHhCCCC
Confidence 79999998885 5556678899888754
|
Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. Formyltetrahydrofolate dehydrogenase produces formate from formyl- tetrahydrofolate. This is the N-terminal domain of these enzymes and is found upstream of the C-terminal domain (IPR005793 from INTERPRO). The trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase catalyses the second, third and fifth steps in de novo purine biosynthesis. The glycinamide ribonucleotide transformylase belongs to this group.; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3P9X_B 3OBI_A 3R8X_A 3KCQ_C 3RFO_D 3AV3_A 3N0V_D 3LOU_A 3O1L_A 4DS3_A .... |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=84.95 E-value=36 Score=34.41 Aligned_cols=66 Identities=12% Similarity=0.091 Sum_probs=40.2
Q ss_pred CceEEEEccCCHH-HHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCC-------hhhHHHHHHhCCCEEEecCC
Q 012492 303 IGQLIIICGRNRT-LASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAG-------PGTIAEALIRGLPIILNDYI 373 (462)
Q Consensus 303 ~~~~lvv~G~~~~-l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg-------~~t~~EAla~G~PvI~~~~~ 373 (462)
++..+.++++..+ -.+..++++ .... ..+++..++..+|++|+.++ -..+-+++..-..+++.|..
T Consensus 201 g~~~i~IaNRT~erA~~La~~~~----~~~~-~l~el~~~l~~~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDia 274 (414)
T COG0373 201 GVKKITIANRTLERAEELAKKLG----AEAV-ALEELLEALAEADVVISSTSAPHPIITREMVERALKIRKRLLIVDIA 274 (414)
T ss_pred CCCEEEEEcCCHHHHHHHHHHhC----Ceee-cHHHHHHhhhhCCEEEEecCCCccccCHHHHHHHHhcccCeEEEEec
Confidence 3456778888753 222333333 2222 23789999999999998655 22344566655566777763
|
|
| >PRK13196 pyrrolidone-carboxylate peptidase; Provisional | Back alignment and domain information |
|---|
Probab=84.48 E-value=3.1 Score=37.97 Aligned_cols=29 Identities=10% Similarity=-0.018 Sum_probs=23.1
Q ss_pred CCeEEEEe-cCCCchHHHHHHHHHHHHhhh
Q 012492 62 TKNVLILM-SDTGGGHRASAEAIRDAFKIE 90 (462)
Q Consensus 62 ~~kIli~~-~~~G~Gh~~~a~aLa~~L~~~ 90 (462)
|||||+++ ...|+-...++..++++|...
T Consensus 1 m~~ILvTGF~PF~~~~~NPS~~~~~~L~~~ 30 (211)
T PRK13196 1 MPTLLLTGFEPFHTHPVNPSAQAAQALNGE 30 (211)
T ss_pred CCEEEEEeecCCCCCCCCcHHHHHHhcccc
Confidence 78999998 457655678889999999765
|
|
| >PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis | Back alignment and domain information |
|---|
Probab=82.16 E-value=3.5 Score=33.88 Aligned_cols=66 Identities=17% Similarity=0.162 Sum_probs=38.9
Q ss_pred HHHHHhcchheecCC-----hhhH---HHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeCCHHHHHHHHHHHh
Q 012492 339 EKWMGACDCIITKAG-----PGTI---AEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWF 407 (462)
Q Consensus 339 ~~l~~~aD~vV~~sg-----~~t~---~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll 407 (462)
..++..||++|.+=| -++. --|.++|+|.|+.....-+ -+..-++..+-.++.+++...+.+..++
T Consensus 67 ~~li~~aDvVVvrFGekYKQWNaAfDAg~a~AlgKplI~lh~~~~~---HpLKEvda~A~a~~et~~Qvv~iL~Yv~ 140 (141)
T PF11071_consen 67 RTLIEKADVVVVRFGEKYKQWNAAFDAGYAAALGKPLITLHPEELH---HPLKEVDAAALAVAETPEQVVEILRYVL 140 (141)
T ss_pred HHHHhhCCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEecchhcc---ccHHHHhHhhHhhhCCHHHHHHHHHHHh
Confidence 357777777776544 3333 3478999999998754211 1111122334455677777777766554
|
This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship. |
| >TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1 | Back alignment and domain information |
|---|
Probab=82.01 E-value=30 Score=29.94 Aligned_cols=36 Identities=19% Similarity=0.231 Sum_probs=26.5
Q ss_pred HHHHHhcchhee-cCChhhH---HHHHHhCCCEEEecCCC
Q 012492 339 EKWMGACDCIIT-KAGPGTI---AEALIRGLPIILNDYIP 374 (462)
Q Consensus 339 ~~l~~~aD~vV~-~sg~~t~---~EAla~G~PvI~~~~~~ 374 (462)
.-+...||++|. ++|.+|+ .|++..++|+++.+..+
T Consensus 86 ~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~~g 125 (159)
T TIGR00725 86 FILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRGTG 125 (159)
T ss_pred HHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEECCC
Confidence 456778998765 5555664 56889999999988654
|
This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE. |
| >PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=80.77 E-value=5.9 Score=35.79 Aligned_cols=26 Identities=31% Similarity=0.409 Sum_probs=20.6
Q ss_pred CCeEEEEecCCCchHHHHHHHHHHHHhhhc
Q 012492 62 TKNVLILMSDTGGGHRASAEAIRDAFKIEF 91 (462)
Q Consensus 62 ~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g 91 (462)
||||+|++++.| +-+.+|.+++.+.+
T Consensus 1 m~ki~vl~sg~g----s~~~~ll~~~~~~~ 26 (200)
T PRK05647 1 MKRIVVLASGNG----SNLQAIIDACAAGQ 26 (200)
T ss_pred CceEEEEEcCCC----hhHHHHHHHHHcCC
Confidence 689999999886 55667888887764
|
|
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=80.59 E-value=19 Score=31.29 Aligned_cols=121 Identities=16% Similarity=0.145 Sum_probs=66.3
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhH
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHS 142 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 142 (462)
||||++.+=.||-|..-+..|++++ + + .++++.. .+ + -|.+..+..
T Consensus 1 M~ILlle~y~ggSHk~~~~~L~~~~-~--~-~~~lltL------P~---r--------------~w~WRmRg~------- 46 (168)
T PF12038_consen 1 MRILLLEPYYGGSHKQWADGLAAHS-E--H-EWTLLTL------PA---R--------------KWHWRMRGA------- 46 (168)
T ss_pred CeEEEEccccccCHHHHHHHHHHhc-c--C-CEEEEEc------CC---C--------------ccccccCCC-------
Confidence 7999998777778999888888888 2 1 2333322 11 1 122111110
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccc-------------
Q 012492 143 CYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWF------------- 209 (462)
Q Consensus 143 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~------------- 209 (462)
+..++ .+.......|+|++++-..-. .+....- . ..++|.+.+.|+-...+|..-
T Consensus 47 ------AL~~a---~~~~~~~~~dll~aTsmldLa-~l~gL~p-~-l~~~p~ilYFHENQl~YP~~~~~~rd~~~~~~ni 114 (168)
T PF12038_consen 47 ------ALYFA---QQIPLSHSYDLLFATSMLDLA-TLRGLRP-D-LANVPKILYFHENQLAYPVSPGQERDFQYGMNNI 114 (168)
T ss_pred ------HHHHh---hccccccCCCEEEeeccccHH-HHHhhcc-C-CCCCCEEEEEecCcccCCCCCCccccccHHHHHH
Confidence 11222 234667778999988744211 1222221 1 148999999887432222110
Q ss_pred --cCCCcEEEEcCHHHHHHHHH
Q 012492 210 --HPRVNRCYCPSKEVAKRASY 229 (462)
Q Consensus 210 --~~~~d~~i~~s~~~~~~l~~ 229 (462)
.--+|+++..|..-++.+.+
T Consensus 115 ~saLaAD~v~FNS~~nr~sFL~ 136 (168)
T PF12038_consen 115 YSALAADRVVFNSAFNRDSFLD 136 (168)
T ss_pred HHHHhceeeeecchhhHHHHHH
Confidence 11357888888777766643
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 462 | |||
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 2e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-06 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 3e-05 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 4e-04 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 4e-04 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 7e-04 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 7e-04 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 9e-04 |
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Length = 364 | Back alignment and structure |
|---|
Score = 76.8 bits (190), Expect = 2e-15
Identities = 45/221 (20%), Positives = 80/221 (36%), Gaps = 34/221 (15%)
Query: 238 RVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLD- 296
V G P+R + + RL + P VL++GG +G A L +++
Sbjct: 157 EVVGNPVRTDVLA--LPLPQQRLAGREGP--VRVLVVGGSQG-------ARILNQTMPQV 205
Query: 297 -KETGRPIGQLIIICGRNRTLASTLQS--EEWKIPVKVRGFETQMEKWMGACDCIITKAG 353
+ G + + G+ + S Q+ E + KV F M D ++ ++G
Sbjct: 206 AAKLGDSV-TIWHQSGK-GSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSG 263
Query: 354 PGTIAEALIRGLPIILNDYIPG------QEKGNVPYVVDNGAGVFTR----SPKETARIV 403
T++E GLP + +P Q N + GA S A +
Sbjct: 264 ALTVSEIAAAGLPALF---VPFQHKDRQQYW-NALPLEKAGAAKIIEQPQLSVDAVANTL 319
Query: 404 TEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQR 444
W + L M+E A + P+A + ++ +A
Sbjct: 320 AGW---SRETLLTMAERARAASIPDATERVANEVSRVARAL 357
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 4e-06
Identities = 42/419 (10%), Positives = 113/419 (26%), Gaps = 104/419 (24%)
Query: 37 SFDSDDDCEEDDESTVELMQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYR 96
+F + DC++ + + + E ++++ G R + + + +
Sbjct: 28 AFVDNFDCKDVQDMPKSI--LSKEEIDHIIMSKDAVSGTLR-----LFWTLLSKQEEMVQ 80
Query: 97 IFVKDVCKEYAGWPLNDMERSYK--------FMVKHVQLWKVA-----FHSTSPKWIHSC 143
FV++V + + ++ ++ + ++ + +L+ ++ + +
Sbjct: 81 KFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL-- 138
Query: 144 YLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITD--L 201
++ L+E +P + + + G K + + V +
Sbjct: 139 -----------KLRQALLELRPAKNVLIDG-VL----------GSGKTWVALDVCLSYKV 176
Query: 202 NTCHPT---WFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNL 258
W + + C P + +R + L
Sbjct: 177 QCKMDFKIFWLN--LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234
Query: 259 RLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLD----KETGRP--IGQLIIICGR 312
R L LL +L + + I++ R
Sbjct: 235 R-RLLKSKPYENCLL--------------------VLLNVQNAKAWNAFNLSCKILLTTR 273
Query: 313 NRTLASTLQSEEWKIPVKV---RGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIIL 369
+ + L + P + L++ L
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLT------------------PDEVKSLLLKYLDCRP 315
Query: 370 NDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPE 428
D +P + P + + S ++ W D+L + E++L + +P
Sbjct: 316 QD-LPREVLTTNPRRL----SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA 369
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Length = 402 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 3e-05
Identities = 17/116 (14%), Positives = 37/116 (31%), Gaps = 17/116 (14%)
Query: 341 WMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETA 400
+ +T G + EA G+P++L + + + V++ G G R +
Sbjct: 294 VLAHARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEP 353
Query: 401 RIVTEWFSTKTDEL---KRMSENALKLAQ-------PEAVVDIVKDIHDLAAQRGP 446
+ E + L + E ++ + P D + + P
Sbjct: 354 ASIRE----AVERLAADSAVRERVRRMQRDILSSGGPARAADE---VEAYLGRVAP 402
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* Length = 282 | Back alignment and structure |
|---|
Score = 41.3 bits (95), Expect = 4e-04
Identities = 36/242 (14%), Positives = 69/242 (28%), Gaps = 26/242 (10%)
Query: 151 YYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFH 210
E+ + E K +++I H + ++K + K + D H
Sbjct: 56 ESIYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGVK----ILSFDDEIKPHHCDIL 111
Query: 211 PRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPA 270
+N + F EV + IR F +
Sbjct: 112 --LNVNAYAKASDYEGLVPFKCEVRCGFSY-ALIREEFYQEAKE--------NRKKKYDF 160
Query: 271 VLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVK 330
+ MGG + + A L ++ + I N L + + ++
Sbjct: 161 FICMGGTDIKNLSLQIASELPKTKIIS---------IATSSSNPNLKKLQKFAKLHNNIR 211
Query: 331 VRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAG 390
+ + K M + +I A + EAL+ Y+ QE ++ G
Sbjct: 212 LFIDHENIAKLMNESNKLIISAS-SLVNEALLLKANFKAICYVKNQES-TATWLAKKGYE 269
Query: 391 VF 392
V
Sbjct: 270 VE 271
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Length = 384 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 4e-04
Identities = 20/112 (17%), Positives = 36/112 (32%), Gaps = 12/112 (10%)
Query: 342 MGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQE--KGNVPYVVDNGAGVFTRSPKET 399
CD ++ AG + L G+P +L IP + V D GA + +++
Sbjct: 277 APTCDLLVHHAGGVSTLTGLSAGVPQLL---IPKGSVLEAPARRVADYGAAIALLPGEDS 333
Query: 400 ARIVTEWFSTKTDELKRMSENALKL-----AQPEAVVDIVKDIHDLAAQRGP 446
+ + + + A L P +V + LA
Sbjct: 334 TEAIADSCQELQAK-DTYARRAQDLSREISGMP-LPATVVTALEQLAHHHHH 383
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 40.9 bits (95), Expect = 7e-04
Identities = 42/337 (12%), Positives = 90/337 (26%), Gaps = 46/337 (13%)
Query: 140 IHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVH-PLMQHIPLWVLKWQGLQKKVIFVTVI 198
+Y + + +KPDI++ + P++ L + + K++ +
Sbjct: 57 AEHVRGLNEQGFYYSGLSEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDL 116
Query: 199 TDLNTCHPTW---FHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISK 255
N W HP+V SK +G +V + + ++
Sbjct: 117 VSKNIRENLWWIFSHPKVVGVMAMSKCWISDICNYGCKV---PINIVSHFVDTKTIYDAR 173
Query: 256 DNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGE--SLLDKETGRPIGQLIIICGRN 313
+ L D +L L M + +A S R + +
Sbjct: 174 KLVGLSEYNDDVL--FLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFD 231
Query: 314 RTLASTLQSEEWKIPVKVRGFET-----------QMEKWMGACDCIITKA---GPG-TIA 358
+ + + +++ ACD I+ + G G A
Sbjct: 232 LHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSA 291
Query: 359 EALIRGLPIILNDY--------------IPGQEKGNVPYVVDNGAGVFTRSPKETARIVT 404
E + G P+I++ I +V G +
Sbjct: 292 EGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF- 350
Query: 405 EWFSTKTDELKRMSENALKLAQ----PEAVVDIVKDI 437
+F + K + + + + + D
Sbjct: 351 TFFKDE-KNRKEYGKRVQDFVKTKPTWDDISSDIIDF 386
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A Length = 224 | Back alignment and structure |
|---|
Score = 40.1 bits (93), Expect = 7e-04
Identities = 21/141 (14%), Positives = 41/141 (29%), Gaps = 23/141 (16%)
Query: 307 IIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWM-GACDCIITKAGPGTIAEALIRGL 365
I A K+ V F T+M+ + D +I+ AG G+I ++L
Sbjct: 94 PIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNK 153
Query: 366 PIILNDYIPGQEKG------NVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSE 419
P+I+ V+ G + L+
Sbjct: 154 PLIV---CVNDSLMDNHQQQIADKFVELGY----------VWSCAPTETGLIAGLRASQT 200
Query: 420 NALK---LAQPEAVVDIVKDI 437
LK ++ + ++ +
Sbjct: 201 EKLKPFPVSHNPSFERLLVET 221
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 416 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 9e-04
Identities = 19/118 (16%), Positives = 31/118 (26%), Gaps = 14/118 (11%)
Query: 339 EKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPY----VVDNGAGVFTR 394
+ +I GT A G+P ++ Q PY V G GV
Sbjct: 297 QALFRRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQ-----PYFAGRVAALGIGVAHD 351
Query: 395 SPKETARIVTEWFSTKTDELKRMSENALKLA---QPEAVVDIVKDIHDLAAQRGPLAR 449
P T ++ +T A +A + + + P
Sbjct: 352 GPTPTFESLSAALTTVLAP--ETRARAEAVAGMVLTDGAAAAADLVLAAVGREKPAVP 407
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 462 | |||
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 100.0 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 100.0 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.97 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.97 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.96 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.96 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.96 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.96 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.96 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.95 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.95 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.95 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.95 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.95 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.95 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.95 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.94 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.94 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.94 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.93 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.93 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.93 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.93 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.93 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.92 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.91 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.91 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.91 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.91 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.9 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.9 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.9 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 99.89 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.88 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 99.88 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.87 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.87 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.86 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 99.83 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.81 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.76 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 99.75 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 99.74 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.71 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.7 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.69 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 99.68 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.64 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 99.63 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.63 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 99.6 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.6 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.59 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.57 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 99.45 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.13 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 98.56 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 98.56 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 98.36 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 98.32 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 98.11 | |
| 1rcu_A | 195 | Conserved hypothetical protein VT76; structural ge | 90.38 | |
| 3sbx_A | 189 | Putative uncharacterized protein; structural genom | 88.74 | |
| 2iz6_A | 176 | Molybdenum cofactor carrier protein; metal transpo | 88.59 | |
| 3ehd_A | 162 | Uncharacterized conserved protein; PSI,MCSG,PF0501 | 86.96 | |
| 1ydh_A | 216 | AT5G11950; structural genomics, protein structure | 86.39 | |
| 1t35_A | 191 | Hypothetical protein YVDD, putative lysine decarbo | 86.22 | |
| 3qua_A | 199 | Putative uncharacterized protein; structural genom | 85.35 | |
| 2ywr_A | 216 | Phosphoribosylglycinamide formyltransferase; rossm | 85.22 | |
| 2khz_A | 165 | C-MYC-responsive protein RCL; flexible loop, nucle | 84.0 | |
| 1s2d_A | 167 | Purine trans deoxyribosylase; ribosylate intermedi | 83.97 | |
| 2a33_A | 215 | Hypothetical protein; structural genomics, protein | 83.57 | |
| 3auf_A | 229 | Glycinamide ribonucleotide transformylase 1; struc | 83.3 | |
| 3ro0_A | 223 | Pyrrolidone-carboxylate peptidase; hydrolase-hydro | 82.17 | |
| 3bq9_A | 460 | Predicted rossmann fold nucleotide-binding domain | 81.87 | |
| 2oho_A | 273 | Glutamate racemase; isomerase; 2.25A {Streptococcu | 80.31 |
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=308.57 Aligned_cols=340 Identities=19% Similarity=0.192 Sum_probs=241.7
Q ss_pred CCCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccc-c-----ccCCCchhhHHHHHHHHhhhHHHHHHhhc
Q 012492 61 RTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCK-E-----YAGWPLNDMERSYKFMVKHVQLWKVAFHS 134 (462)
Q Consensus 61 ~~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~-~-----~~~~~~~~~~~~y~~~~~~~~l~~~~~~~ 134 (462)
|++||+|.++||| ||..++++||++|+++|++ ..++++... + ..++++..++. .++.+
T Consensus 1 M~~~i~i~~GGTg-GHi~palala~~L~~~g~~--V~~vg~~~g~e~~~v~~~g~~~~~i~~-------------~~~~~ 64 (365)
T 3s2u_A 1 MKGNVLIMAGGTG-GHVFPALACAREFQARGYA--VHWLGTPRGIENDLVPKAGLPLHLIQV-------------SGLRG 64 (365)
T ss_dssp --CEEEEECCSSH-HHHHHHHHHHHHHHHTTCE--EEEEECSSSTHHHHTGGGTCCEEECC-------------------
T ss_pred CCCcEEEEcCCCH-HHHHHHHHHHHHHHhCCCE--EEEEECCchHhhchhhhcCCcEEEEEC-------------CCcCC
Confidence 4578999999995 9999999999999999862 234442110 0 01111111110 00000
Q ss_pred -CCcchhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC-CCcccccCC
Q 012492 135 -TSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT-CHPTWFHPR 212 (462)
Q Consensus 135 -~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~-~~~~~~~~~ 212 (462)
.....+...+.. .....++.+++++++||+||+++++.+....++++. .++|+|.+..+... ...+|+.+.
T Consensus 65 ~~~~~~~~~~~~~---~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~----~~iP~vihe~n~~~G~~nr~l~~~ 137 (365)
T 3s2u_A 65 KGLKSLVKAPLEL---LKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARL----NGVPLVIHEQNAVAGTANRSLAPI 137 (365)
T ss_dssp --------CHHHH---HHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHH----TTCCEEEEECSSSCCHHHHHHGGG
T ss_pred CCHHHHHHHHHHH---HHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHH----cCCCEEEEecchhhhhHHHhhccc
Confidence 000111112211 122345667899999999999999887766666665 48999754433211 112466778
Q ss_pred CcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHH
Q 012492 213 VNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGE 292 (462)
Q Consensus 213 ~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~ 292 (462)
++++++..++. ..+..++.++|+|+++++.... +.+++++++++.+|++||+.|...+.+.+.++++
T Consensus 138 a~~v~~~~~~~-------~~~~~k~~~~g~pvr~~~~~~~------~~~~~~~~~~~~ilv~gGs~g~~~~~~~~~~al~ 204 (365)
T 3s2u_A 138 ARRVCEAFPDT-------FPASDKRLTTGNPVRGELFLDA------HARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALA 204 (365)
T ss_dssp CSEEEESSTTS-------SCC---CEECCCCCCGGGCCCT------TSSCCCTTSCCEEEECCTTTTCSHHHHHHHHHHH
T ss_pred cceeeeccccc-------ccCcCcEEEECCCCchhhccch------hhhcccCCCCcEEEEECCcCCccccchhhHHHHH
Confidence 89888776543 1234678899999998876531 1235677788899999999999988888777766
Q ss_pred hhhcccCCCCCceEEEEccCCH--HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEe
Q 012492 293 SLLDKETGRPIGQLIIICGRNR--TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILN 370 (462)
Q Consensus 293 ~l~~~~~~~~~~~~lvv~G~~~--~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~ 370 (462)
.+.. ..++++++++|.+. .+.+.+++ ...++.+.+|++||.++|+.||++|+++|++|++|++++|+|+|++
T Consensus 205 ~l~~----~~~~~vi~~~G~~~~~~~~~~~~~--~~~~~~v~~f~~dm~~~l~~aDlvI~raG~~Tv~E~~a~G~P~Ili 278 (365)
T 3s2u_A 205 QVPL----EIRPAIRHQAGRQHAEITAERYRT--VAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLV 278 (365)
T ss_dssp TSCT----TTCCEEEEECCTTTHHHHHHHHHH--TTCCCEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred hccc----ccceEEEEecCccccccccceecc--cccccccccchhhhhhhhccceEEEecCCcchHHHHHHhCCCeEEe
Confidence 6653 23567888899874 23444443 3457889999999999999999999999999999999999999999
Q ss_pred cCC---CCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 371 DYI---PGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 371 ~~~---~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
|.+ .++|..|++.+++.|+++++. +++.++++|.+++ +||+.+++|++++++++.++++++|++.|+++++.
T Consensus 279 p~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll-~d~~~~~~m~~~a~~~~~~~aa~~ia~~i~~larG 357 (365)
T 3s2u_A 279 PLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVL-MHPETLRSMADQARSLAKPEATRTVVDACLEVARG 357 (365)
T ss_dssp C-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHH-HCTHHHHHHHHHHHHTCCTTHHHHHHHHHHHHC--
T ss_pred ccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHH-CCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHcc
Confidence 876 478889999999999999886 4788999999999 79999999999999999999999999999998853
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-31 Score=264.91 Aligned_cols=341 Identities=15% Similarity=0.162 Sum_probs=238.9
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCC-cchhh
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTS-PKWIH 141 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~-~~~~~ 141 (462)
|||++++.+.| ||..++..|+++|.++|+ +|.+..... +.....++. ...+.......... .....
T Consensus 7 mkIl~~~~~~g-G~~~~~~~la~~L~~~G~---~V~v~~~~~---~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~ 73 (364)
T 1f0k_A 7 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGW---QVRWLGTAD---RMEADLVPK------HGIEIDFIRISGLRGKGIKA 73 (364)
T ss_dssp CEEEEECCSSH-HHHHHHHHHHHHHHTTTC---EEEEEECTT---STHHHHGGG------GTCEEEECCCCCCTTCCHHH
T ss_pred cEEEEEeCCCc-cchhHHHHHHHHHHHcCC---EEEEEecCC---cchhhhccc------cCCceEEecCCccCcCccHH
Confidence 89999998885 999999999999999875 455442110 000000000 00000000000000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC-CCcccccCCCcEEEEcC
Q 012492 142 SCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT-CHPTWFHPRVNRCYCPS 220 (462)
Q Consensus 142 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~-~~~~~~~~~~d~~i~~s 220 (462)
.+...........++.+.+++++||+||+++++.......+++. .++|+|...|+... ....|+.+.+|.+++.+
T Consensus 74 ~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~----~~~p~v~~~~~~~~~~~~~~~~~~~d~v~~~~ 149 (364)
T 1f0k_A 74 LIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWS----LGIPVVLHEQNGIAGLTNKWLAKIATKVMQAF 149 (364)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHH----TTCCEEEEECSSSCCHHHHHHTTTCSEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHH----cCCCEEEEecCCCCcHHHHHHHHhCCEEEecC
Confidence 00000111234556778899999999999987644433344444 47999877776421 12346678899999987
Q ss_pred HHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCC
Q 012492 221 KEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETG 300 (462)
Q Consensus 221 ~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~ 300 (462)
+.. ++ ++.++||+++..++... ..+++++++++.+++++++|+.+.++..+.+.++++.+.+
T Consensus 150 ~~~--------~~--~~~~i~n~v~~~~~~~~----~~~~~~~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~---- 211 (364)
T 1f0k_A 150 PGA--------FP--NAEVVGNPVRTDVLALP----LPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGD---- 211 (364)
T ss_dssp TTS--------SS--SCEECCCCCCHHHHTSC----CHHHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG----
T ss_pred hhh--------cC--CceEeCCccchhhcccc----hhhhhcccCCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC----
Confidence 653 33 57899999998766431 1245677877778888889888877666666455555532
Q ss_pred CCCceEEEEccCCH--HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCC--Cc
Q 012492 301 RPIGQLIIICGRNR--TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIP--GQ 376 (462)
Q Consensus 301 ~~~~~~lvv~G~~~--~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~--~~ 376 (462)
++++++++|.+. ++.+.++++++ .+|.|.|+++++.++|+.||++|++||+++++|||++|+|+|+++.++ ++
T Consensus 212 --~~~~l~i~G~~~~~~l~~~~~~~~~-~~v~~~g~~~~~~~~~~~ad~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~ 288 (364)
T 1f0k_A 212 --SVTIWHQSGKGSQQSVEQAYAEAGQ-PQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQ 288 (364)
T ss_dssp --GEEEEEECCTTCHHHHHHHHHHTTC-TTSEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECCCCCTTCH
T ss_pred --CcEEEEEcCCchHHHHHHHHhhcCC-CceEEecchhhHHHHHHhCCEEEECCchHHHHHHHHhCCCEEEeeCCCCchh
Confidence 467677788775 34555555555 479999999999999999999999999999999999999999999864 56
Q ss_pred cccchHHHHHCCceeeeCC----HHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhcc
Q 012492 377 EKGNVPYVVDNGAGVFTRS----PKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQR 444 (462)
Q Consensus 377 ~~~n~~~l~~~G~g~~~~~----~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~~ 444 (462)
|..|+..+++.|.|++++. +++++++|.++ |++.+++|+++++++++.++++++++.+++++++.
T Consensus 289 q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 357 (364)
T 1f0k_A 289 QYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW---SRETLLTMAERARAASIPDATERVANEVSRVARAL 357 (364)
T ss_dssp HHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc---CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHH
Confidence 6778999999999988863 78889988887 89999999999999999999999999999998754
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-29 Score=248.96 Aligned_cols=349 Identities=14% Similarity=0.111 Sum_probs=228.5
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHh-hcCCc-chh
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAF-HSTSP-KWI 140 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~-~~~~~-~~~ 140 (462)
|||+++++.. .+...+..|+++|+++|+..+++.+. +.........+.. ++..+ ..... +..
T Consensus 1 mkIl~v~~~~--~~~~~~~~l~~~L~~~g~~~~~v~~~-------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 64 (384)
T 1vgv_A 1 MKVLTVFGTR--PEAIKMAPLVHALAKDPFFEAKVCVT-------AQHREMLDQVLKL-------FSIVPDYDLNIMQPG 64 (384)
T ss_dssp CEEEEEECSH--HHHHHHHHHHHHHHHSTTCEEEEEEC-------CSSGGGGHHHHHH-------HTCCCSEECCCCSTT
T ss_pred CeEEEEeccc--HHHHHHHHHHHHHHhCCCCceEEEEc-------CCCHHHHHHHHHH-------cCCCCCcceecCCCC
Confidence 7999987664 33445578999999987423444332 1111111111111 11101 01100 000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCc-ccchHHHHHHHHcCCCCCCeEEEEecCCCCCC-----c-----ccc
Q 012492 141 HSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHP-LMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH-----P-----TWF 209 (462)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~-~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~-----~-----~~~ 209 (462)
..... .......++.+++++++||+||++++ ........+++. .++|+|.+.++..... + .+.
T Consensus 65 ~~~~~--~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~----~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~ 138 (384)
T 1vgv_A 65 QGLTE--ITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFY----QRIPVGHVEAGLRTGDLYSPWPEEANRTLT 138 (384)
T ss_dssp SCHHH--HHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHT----TTCCEEEESCCCCCSCTTSSTTHHHHHHHH
T ss_pred ccHHH--HHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHH----HCCCEEEEecccccccccCCCchHhhHHHH
Confidence 01111 01233467788999999999999875 322222233332 4899988777653111 0 112
Q ss_pred cCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccC-------ChHHHHHHcC-CCCCCcEEEEEeCCCCC-
Q 012492 210 HPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVI-------SKDNLRLELQ-MDPILPAVLLMGGGEGM- 280 (462)
Q Consensus 210 ~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~-------~~~~~r~~l~-l~~~~~~iLv~gG~~~~- 280 (462)
.+.+|.++++|+..++.+.+.|++++++.++||++.+.+..... .+.+++++++ ++++.+++++++|+...
T Consensus 139 ~~~~d~ii~~s~~~~~~l~~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~ 218 (384)
T 1vgv_A 139 GHLAMYHFSPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESF 218 (384)
T ss_dssp HTTCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSC
T ss_pred HhhccEEEcCcHHHHHHHHHcCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCcccc
Confidence 45689999999999999988899888999999996443322100 0125677788 76666677777776543
Q ss_pred -ccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhc-cCCCCeEEeccc--hhHHHHHHhcchheecCChhh
Q 012492 281 -GPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSE-EWKIPVKVRGFE--TQMEKWMGACDCIITKAGPGT 356 (462)
Q Consensus 281 -~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~-~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg~~t 356 (462)
++...+++++ ..+.+. .|++++++++|.+..+.+.++++ +..++|.|.|+. +++.++|+.||++|++||+ +
T Consensus 219 ~kg~~~li~a~-~~l~~~---~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~Sg~-~ 293 (384)
T 1vgv_A 219 GRGFEEICHAL-ADIATT---HQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDSGG-I 293 (384)
T ss_dssp CHHHHHHHHHH-HHHHHH---CTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESSST-G
T ss_pred chHHHHHHHHH-HHHHhh---CCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcEEEECCcc-h
Confidence 3445555544 444332 46788777677664444555443 334689996543 6899999999999999965 5
Q ss_pred HHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHH
Q 012492 357 IAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR-SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVK 435 (462)
Q Consensus 357 ~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~-~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~ 435 (462)
++|||++|+|+|+++..++ ...+++.|.|++++ |+++++++|.+++ +|++.+++|+++++++...++++++++
T Consensus 294 ~lEA~a~G~PvI~~~~~~~-----~~e~v~~g~g~lv~~d~~~la~~i~~ll-~d~~~~~~~~~~~~~~~~~~~~~~i~~ 367 (384)
T 1vgv_A 294 QEEAPSLGKPVLVMRDTTE-----RPEAVTAGTVRLVGTDKQRIVEEVTRLL-KDENEYQAMSRAHNPYGDGQACSRILE 367 (384)
T ss_dssp GGTGGGGTCCEEEESSCCS-----CHHHHHHTSEEEECSSHHHHHHHHHHHH-HCHHHHHHHHSSCCTTCCSCHHHHHHH
T ss_pred HHHHHHcCCCEEEccCCCC-----cchhhhCCceEEeCCCHHHHHHHHHHHH-hChHHHhhhhhccCCCcCCCHHHHHHH
Confidence 8999999999999986433 23456667888884 8999999999999 699999999999999988999999999
Q ss_pred HHHHHHhcc
Q 012492 436 DIHDLAAQR 444 (462)
Q Consensus 436 ~i~~l~~~~ 444 (462)
.+++++++.
T Consensus 368 ~~~~~~~~~ 376 (384)
T 1vgv_A 368 ALKNNRISL 376 (384)
T ss_dssp HHHHTCCCC
T ss_pred HHHHHHHhh
Confidence 999887665
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-28 Score=250.73 Aligned_cols=268 Identities=15% Similarity=0.116 Sum_probs=195.6
Q ss_pred HHhh-CCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCc------------------ccccCCCcEEEEcC
Q 012492 160 LMEY-KPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHP------------------TWFHPRVNRCYCPS 220 (462)
Q Consensus 160 l~~~-kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~------------------~~~~~~~d~~i~~s 220 (462)
+++. +||+|+++..........+++. .++|+|...|+...... .+..+.+|.++++|
T Consensus 117 ~~~~~~~Div~~~~~~~~~~~~~~~~~----~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s 192 (438)
T 3c48_A 117 RREKVTYDLIHSHYWLSGQVGWLLRDL----WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNT 192 (438)
T ss_dssp HHHTCCCSEEEEEHHHHHHHHHHHHHH----HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESS
T ss_pred HhccCCCCEEEeCCccHHHHHHHHHHH----cCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcC
Confidence 5555 4999999865433332233443 37899988887531000 12235689999999
Q ss_pred HHHHHHHHH-cCCCCCcEEEcCCCCChhhhcccC--ChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcc
Q 012492 221 KEVAKRASY-FGLEVSQIRVFGLPIRPSFVRAVI--SKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDK 297 (462)
Q Consensus 221 ~~~~~~l~~-~gi~~~~i~v~g~pv~~~~~~~~~--~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~ 297 (462)
+..++.+.+ .|++.+++.+++|+++...+.+.. .++.++++++++++.++++++|+....++...+++++ +.+.+.
T Consensus 193 ~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~-~~l~~~ 271 (438)
T 3c48_A 193 QEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAV-AALFDR 271 (438)
T ss_dssp HHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTTCCSSSEEEEEESCBSGGGCHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHhcCCCCCCcEEEEEeeecccCCHHHHHHHH-HHHHhh
Confidence 999999877 688888999999999876655321 1234888999987777666665544455566666554 455442
Q ss_pred cCCCC--CceEEEEccC----CH---HHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC----hhhHHHHHH
Q 012492 298 ETGRP--IGQLIIICGR----NR---TLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG----PGTIAEALI 362 (462)
Q Consensus 298 ~~~~~--~~~~lvv~G~----~~---~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg----~~t~~EAla 362 (462)
.| +++++++ |. +. .+.+.++++++.++|.|.|++ +++.++|+.||++|.+|. |++++|||+
T Consensus 272 ---~p~~~~~l~i~-G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama 347 (438)
T 3c48_A 272 ---DPDRNLRVIIC-GGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQA 347 (438)
T ss_dssp ---CTTCSEEEEEE-CCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHH
T ss_pred ---CCCcceEEEEE-eCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHH
Confidence 34 5666554 54 22 366777778888899999999 799999999999999873 889999999
Q ss_pred hCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH
Q 012492 363 RGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDL 440 (462)
Q Consensus 363 ~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l 440 (462)
+|+|+|+++.++ ..+.+.+.+.|++++ |+++++++|.+++ +|++.+++|++++++.+..++++.+++.+.++
T Consensus 348 ~G~PvI~~~~~~-----~~e~i~~~~~g~~~~~~d~~~la~~i~~l~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 421 (438)
T 3c48_A 348 SGTPVIAARVGG-----LPIAVAEGETGLLVDGHSPHAWADALATLL-DDDETRIRMGEDAVEHARTFSWAATAAQLSSL 421 (438)
T ss_dssp TTCCEEEESCTT-----HHHHSCBTTTEEEESSCCHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEecCCCC-----hhHHhhCCCcEEECCCCCHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999998642 222333444677775 7999999999999 69999999999999998779999999988877
Q ss_pred Hh
Q 012492 441 AA 442 (462)
Q Consensus 441 ~~ 442 (462)
++
T Consensus 422 ~~ 423 (438)
T 3c48_A 422 YN 423 (438)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.8e-28 Score=238.32 Aligned_cols=274 Identities=15% Similarity=0.123 Sum_probs=193.7
Q ss_pred HHHHHHHHHHhhCCCEEEECCcccchHH-HHHHHHcCCCCCCeEEEEecCCCCCC-----ccc-----ccCCCcEEEEcC
Q 012492 152 YAKEVEAGLMEYKPDIIISVHPLMQHIP-LWVLKWQGLQKKVIFVTVITDLNTCH-----PTW-----FHPRVNRCYCPS 220 (462)
Q Consensus 152 ~~~~l~~~l~~~kPDvVi~~~~~~~~~~-~~~~~~~~~~~~iP~v~~~~d~~~~~-----~~~-----~~~~~d~~i~~s 220 (462)
...++.+++++++||+||++++...... ..+++. .++|+|.+.++..... ..+ +.+.+|.++++|
T Consensus 83 ~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~----~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s 158 (375)
T 3beo_A 83 GLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFY----NQIPVGHVEAGLRTWDKYSPYPEEMNRQLTGVMADLHFSPT 158 (375)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHH----TTCCEEEESCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESS
T ss_pred HHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHH----HCCCEEEEecccccccccCCChhHhhhhHHhhhhheeeCCC
Confidence 4556788899999999999765332222 233443 4899987666432110 011 123489999999
Q ss_pred HHHHHHHHHcCCCCCcEEEcCCC-CChhhhcccC-ChHHHHHHcCCCCCCcEEEEEeCCCCC--ccHHHHHHHHHHhhhc
Q 012492 221 KEVAKRASYFGLEVSQIRVFGLP-IRPSFVRAVI-SKDNLRLELQMDPILPAVLLMGGGEGM--GPVKETAMALGESLLD 296 (462)
Q Consensus 221 ~~~~~~l~~~gi~~~~i~v~g~p-v~~~~~~~~~-~~~~~r~~l~l~~~~~~iLv~gG~~~~--~~~~~~l~~l~~~l~~ 296 (462)
+..++.+.+.|++++++.++||+ ++...+.... .+..+++++ + +.+++++++|+... ++...+++++ +.+.+
T Consensus 159 ~~~~~~~~~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~--~-~~~~vl~~~gr~~~~~K~~~~li~a~-~~l~~ 234 (375)
T 3beo_A 159 AKSATNLQKENKDESRIFITGNTAIDALKTTVKETYSHPVLEKL--G-NNRLVLMTAHRRENLGEPMRNMFRAI-KRLVD 234 (375)
T ss_dssp HHHHHHHHHTTCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTT--T-TSEEEEEECCCGGGTTHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECChhHhhhhhhhhhhhhHHHHHhc--c-CCCeEEEEecccccchhHHHHHHHHH-HHHHh
Confidence 99999998889988899999999 6554433211 234455555 2 34566777776653 4455555544 44543
Q ss_pred ccCCCCCceEEEEccCCHHHHHHHhhc-cCCCCeEEeccc--hhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCC
Q 012492 297 KETGRPIGQLIIICGRNRTLASTLQSE-EWKIPVKVRGFE--TQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYI 373 (462)
Q Consensus 297 ~~~~~~~~~~lvv~G~~~~l~~~~~~~-~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~ 373 (462)
. .|++++++..|...++.+.++++ +..++|.|.|+. .++..+|+.||++|++|| ++++|||++|+|+|+++..
T Consensus 235 ~---~~~~~~i~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~sg-~~~lEA~a~G~Pvi~~~~~ 310 (375)
T 3beo_A 235 K---HEDVQVVYPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDSG-GVQEEAPSLGVPVLVLRDT 310 (375)
T ss_dssp H---CTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECCH-HHHHHHHHHTCCEEECSSC
T ss_pred h---CCCeEEEEeCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECCC-ChHHHHHhcCCCEEEecCC
Confidence 2 46777665445444455555543 334689997765 489999999999999994 5699999999999999653
Q ss_pred CCccccchHHHHHCCceeee-CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 374 PGQEKGNVPYVVDNGAGVFT-RSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 374 ~~~~~~n~~~l~~~G~g~~~-~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
++. ..+++.|.|+++ .|+++++++|.+++ +|++.+++|+++++++.+.++++++++.+++++++
T Consensus 311 ~~~-----~e~v~~g~g~~v~~d~~~la~~i~~ll-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 375 (375)
T 3beo_A 311 TER-----PEGIEAGTLKLAGTDEETIFSLADELL-SDKEAHDKMSKASNPYGDGRASERIVEAILKHFNK 375 (375)
T ss_dssp CSC-----HHHHHTTSEEECCSCHHHHHHHHHHHH-HCHHHHHHHCCCCCTTCCSCHHHHHHHHHHHHTTC
T ss_pred CCC-----ceeecCCceEEcCCCHHHHHHHHHHHH-hChHhHhhhhhcCCCCCCCcHHHHHHHHHHHHhhC
Confidence 332 345677888887 58999999999999 79999999999999998899999999999998753
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.5e-28 Score=240.95 Aligned_cols=273 Identities=13% Similarity=0.135 Sum_probs=200.7
Q ss_pred HHHHHHHHHHHhhCCCEEEECCcccchHH-HHHHHHcCCCCCCeEEEEecCCCC--CCccc--------ccCCCcEEEEc
Q 012492 151 YYAKEVEAGLMEYKPDIIISVHPLMQHIP-LWVLKWQGLQKKVIFVTVITDLNT--CHPTW--------FHPRVNRCYCP 219 (462)
Q Consensus 151 ~~~~~l~~~l~~~kPDvVi~~~~~~~~~~-~~~~~~~~~~~~iP~v~~~~d~~~--~~~~~--------~~~~~d~~i~~ 219 (462)
....++.+++++++||+|++++......+ ..+++. .+||++.+...... .+..| +.+.+|.++++
T Consensus 98 ~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~----~~IPv~h~~ag~rs~~~~~~~~~~~~r~~~~~~a~~~~~~ 173 (396)
T 3dzc_A 98 KILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYY----QQIPVGHVEAGLRTGNIYSPWPEEGNRKLTAALTQYHFAP 173 (396)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHT----TTCCEEEETCCCCCSCTTSSTTHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHH----hCCCEEEEECCccccccccCCcHHHHHHHHHHhcCEEECC
Confidence 45567889999999999999887655333 334443 48998876543211 11111 24577999999
Q ss_pred CHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCC-------hHHHHHHcC-CCCCCcEEEEEeCCCCC--ccHHHHHHH
Q 012492 220 SKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVIS-------KDNLRLELQ-MDPILPAVLLMGGGEGM--GPVKETAMA 289 (462)
Q Consensus 220 s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~-------~~~~r~~l~-l~~~~~~iLv~gG~~~~--~~~~~~l~~ 289 (462)
++..++.+.+.|++++++.++|||+.+.+...... +++++++++ ++++.+++|++++..+. +.+..++++
T Consensus 174 se~~~~~l~~~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll~A 253 (396)
T 3dzc_A 174 TDTSRANLLQENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERICQA 253 (396)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTHHHHHHHH
T ss_pred CHHHHHHHHHcCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchhHHHHHHHH
Confidence 99999999999999899999999876544332111 256788899 56677888888855432 234444444
Q ss_pred HHHhhhcccCCCCCceEEEEccCCHHHHHHHhhc-cCCCCeEEeccc--hhHHHHHHhcchheecCChhhHHHHHHhCCC
Q 012492 290 LGESLLDKETGRPIGQLIIICGRNRTLASTLQSE-EWKIPVKVRGFE--TQMEKWMGACDCIITKAGPGTIAEALIRGLP 366 (462)
Q Consensus 290 l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~-~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg~~t~~EAla~G~P 366 (462)
+ +.+.+. +|++++++.+|.+..+++.++++ +...+|.+.++. .++..+|+.||++|++||+. ..||+++|+|
T Consensus 254 ~-~~l~~~---~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~SGg~-~~EA~a~G~P 328 (396)
T 3dzc_A 254 L-ITTAEQ---HPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDSGGI-QEEAPSLGKP 328 (396)
T ss_dssp H-HHHHHH---CTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSEEEESCSGG-GTTGGGGTCC
T ss_pred H-HHHHHh---CCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCEEEECCccH-HHHHHHcCCC
Confidence 4 445432 46788877788776566666653 445789998776 58999999999999999844 4899999999
Q ss_pred EEEecCCCCccccchHHHHHCCceeeeC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHH
Q 012492 367 IILNDYIPGQEKGNVPYVVDNGAGVFTR-SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIH 438 (462)
Q Consensus 367 vI~~~~~~~~~~~n~~~l~~~G~g~~~~-~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~ 438 (462)
+|+++..++.+ .+++.|.++++. +++++++++.+++ +|++.+++|++++..+.+..++++|++.|+
T Consensus 329 vV~~~~~~~~~-----e~v~~G~~~lv~~d~~~l~~ai~~ll-~d~~~~~~m~~~~~~~~~~~aa~ri~~~l~ 395 (396)
T 3dzc_A 329 VLVMRETTERP-----EAVAAGTVKLVGTNQQQICDALSLLL-TDPQAYQAMSQAHNPYGDGKACQRIADILA 395 (396)
T ss_dssp EEECCSSCSCH-----HHHHHTSEEECTTCHHHHHHHHHHHH-HCHHHHHHHHTSCCTTCCSCHHHHHHHHHH
T ss_pred EEEccCCCcch-----HHHHcCceEEcCCCHHHHHHHHHHHH-cCHHHHHHHhhccCCCcCChHHHHHHHHHh
Confidence 99985433322 356778888886 6999999999999 799999999999999999999999999875
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-28 Score=240.04 Aligned_cols=272 Identities=14% Similarity=0.109 Sum_probs=189.8
Q ss_pred HHHHHHHHHhhCCCEEEECCcccchHH-HHHHHHcCCCCCCeEEEEecCCCCCC----------cccccCCCcEEEEcCH
Q 012492 153 AKEVEAGLMEYKPDIIISVHPLMQHIP-LWVLKWQGLQKKVIFVTVITDLNTCH----------PTWFHPRVNRCYCPSK 221 (462)
Q Consensus 153 ~~~l~~~l~~~kPDvVi~~~~~~~~~~-~~~~~~~~~~~~iP~v~~~~d~~~~~----------~~~~~~~~d~~i~~s~ 221 (462)
..++.+++++++||+||++++.....+ ..+++. .++|++++.++..... ..++.+.+|.++++|+
T Consensus 80 ~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~----~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 155 (376)
T 1v4v_A 80 LPQAARALKEMGADYVLVHGDTLTTFAVAWAAFL----EGIPVGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAPTP 155 (376)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHH----TTCCEEEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSH
T ss_pred HHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHH----hCCCEEEEeCCCccccccCCCchHHHHHHHHHHhceeeCCCH
Confidence 456778899999999999875433322 334444 4899886655432110 1123345789999999
Q ss_pred HHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCC-CccHHHHHHHHHHhhhcccCC
Q 012492 222 EVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEG-MGPVKETAMALGESLLDKETG 300 (462)
Q Consensus 222 ~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~-~~~~~~~l~~l~~~l~~~~~~ 300 (462)
..++.+.+.|++++++.++||++.+.+... ..+..+++++ + +.+++++++|+.. .++...+++++ +.+.+.
T Consensus 156 ~~~~~l~~~g~~~~ki~vi~n~~~d~~~~~-~~~~~~~~~~--~-~~~~vl~~~gr~~~~k~~~~ll~a~-~~l~~~--- 227 (376)
T 1v4v_A 156 LAKANLLKEGKREEGILVTGQTGVDAVLLA-AKLGRLPEGL--P-EGPYVTVTMHRRENWPLLSDLAQAL-KRVAEA--- 227 (376)
T ss_dssp HHHHHHHTTTCCGGGEEECCCHHHHHHHHH-HHHCCCCTTC--C-SSCEEEECCCCGGGGGGHHHHHHHH-HHHHHH---
T ss_pred HHHHHHHHcCCCcceEEEECCchHHHHhhh-hhhhHHHHhc--C-CCCEEEEEeCcccchHHHHHHHHHH-HHHHhh---
Confidence 999999888998889999999864433221 0111122223 2 3456777777553 23455555544 444432
Q ss_pred CCCceEEEEccCCHHHHHHHhhc-cCCCCeEEe---ccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCCCc
Q 012492 301 RPIGQLIIICGRNRTLASTLQSE-EWKIPVKVR---GFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQ 376 (462)
Q Consensus 301 ~~~~~~lvv~G~~~~l~~~~~~~-~~~~~V~~~---g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~ 376 (462)
.|++++++++|++..+++.++++ +..++|.|. |+. ++.++|+.||++|++||+. ++|||++|+|+|+++..++.
T Consensus 228 ~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~-~~~~~~~~ad~~v~~S~g~-~lEA~a~G~PvI~~~~~~~~ 305 (376)
T 1v4v_A 228 FPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYG-SMAALMRASLLLVTDSGGL-QEEGAALGVPVVVLRNVTER 305 (376)
T ss_dssp CTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHH-HHHHHHHTEEEEEESCHHH-HHHHHHTTCCEEECSSSCSC
T ss_pred CCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHH-HHHHHHHhCcEEEECCcCH-HHHHHHcCCCEEeccCCCcc
Confidence 46777776678765444444443 224689999 555 8999999999999999654 78999999999998754443
Q ss_pred cccchHHHHHCCceeee-CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhcc
Q 012492 377 EKGNVPYVVDNGAGVFT-RSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQR 444 (462)
Q Consensus 377 ~~~n~~~l~~~G~g~~~-~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~~ 444 (462)
+. +++.|.|+++ .|++++++++.+++ +|++.+++|+++++++....+++++++.+.++++-.
T Consensus 306 ~~-----~~~~g~g~lv~~d~~~la~~i~~ll-~d~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~ 368 (376)
T 1v4v_A 306 PE-----GLKAGILKLAGTDPEGVYRVVKGLL-ENPEELSRMRKAKNPYGDGKAGLMVARGVAWRLGLG 368 (376)
T ss_dssp HH-----HHHHTSEEECCSCHHHHHHHHHHHH-TCHHHHHHHHHSCCSSCCSCHHHHHHHHHHHHTTSS
T ss_pred hh-----hhcCCceEECCCCHHHHHHHHHHHH-hChHhhhhhcccCCCCCCChHHHHHHHHHHHHhccc
Confidence 32 4667888888 68999999999999 799999999988777877889999999999988633
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-27 Score=237.76 Aligned_cols=349 Identities=11% Similarity=0.088 Sum_probs=232.2
Q ss_pred CCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEecccccc-CCCchhhHHHHHHHHhhhHHHHHHhhcCCcchh
Q 012492 62 TKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYA-GWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWI 140 (462)
Q Consensus 62 ~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~-~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~ 140 (462)
..+|.....+..||....+..|+++|.++|+ +|.+........ ......+. + ...+... +... ...
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~---~V~v~~~~~~~~~~~~~~~i~--~----~~~~~~~--~~~~--~~~ 81 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGH---EIHFITSGLPFRLNKVYPNIY--F----HEVTVNQ--YSVF--QYP 81 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTC---EEEEECSSCC----CCCTTEE--E----ECCCCC------C--CSC
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCC---EEEEEeCCCCCcccccCCceE--E----Eeccccc--cccc--ccc
Confidence 3466666544335999999999999999985 555442211000 00000000 0 0000000 0000 000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC----CCc------cccc
Q 012492 141 HSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT----CHP------TWFH 210 (462)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~----~~~------~~~~ 210 (462)
.......+++.+++++.+||+|+++++........+++... ..++|+|...|+... ..+ .+..
T Consensus 82 ------~~~~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~-~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~ 154 (394)
T 2jjm_A 82 ------PYDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMI-GERIKIVTTLHGTDITVLGSDPSLNNLIRFGI 154 (394)
T ss_dssp ------CHHHHHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHT-TTCSEEEEECCHHHHHTTTTCTTTHHHHHHHH
T ss_pred ------cccHHHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhh-cCCCCEEEEEecCcccccCCCHHHHHHHHHHH
Confidence 01123445677889999999999987654433233333321 026999988876310 001 1223
Q ss_pred CCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHH
Q 012492 211 PRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMAL 290 (462)
Q Consensus 211 ~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l 290 (462)
+.+|.++++|+..++.+.+.+..++++.+++|+++...+.+ ..+..++++++++++.++++++|+....++...+++++
T Consensus 155 ~~ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~ 233 (394)
T 2jjm_A 155 EQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFK-RDMTQLKKEYGISESEKILIHISNFRKVKRVQDVVQAF 233 (394)
T ss_dssp HHSSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCC-CCCHHHHHHTTCC---CEEEEECCCCGGGTHHHHHHHH
T ss_pred hhCCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCC-cchHHHHHHcCCCCCCeEEEEeeccccccCHHHHHHHH
Confidence 56899999999999998876544678999999998876654 34567888899977777777766555556666666554
Q ss_pred HHhhhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCC----hhhHHHHHHh
Q 012492 291 GESLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAG----PGTIAEALIR 363 (462)
Q Consensus 291 ~~~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg----~~t~~EAla~ 363 (462)
+.+.+ .+++++++ +|.+. ++.+.++++++.++|.|.|+.+++.++|+.||++|.+|. |++++|||++
T Consensus 234 -~~l~~----~~~~~l~i-~G~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~ 307 (394)
T 2jjm_A 234 -AKIVT----EVDAKLLL-VGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMAC 307 (394)
T ss_dssp -HHHHH----SSCCEEEE-ECCCTTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHT
T ss_pred -HHHHh----hCCCEEEE-ECCchHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCEEEeccccCCCchHHHHHHhc
Confidence 45544 13566554 55543 356667777778899999999999999999999998763 8999999999
Q ss_pred CCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc-CCcHHHHHHHHHHHH
Q 012492 364 GLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLA-QPEAVVDIVKDIHDL 440 (462)
Q Consensus 364 G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~-~~~~~~~ia~~i~~l 440 (462)
|+|+|+++.++..+ .+.+.+.|++++ |+++++++|.+++ +|++.+++|++++++.+ +.++++++++.++++
T Consensus 308 G~PvI~~~~~~~~e-----~v~~~~~g~~~~~~d~~~la~~i~~l~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 381 (394)
T 2jjm_A 308 GVPCIGTRVGGIPE-----VIQHGDTGYLCEVGDTTGVADQAIQLL-KDEELHRNMGERARESVYEQFRSEKIVSQYETI 381 (394)
T ss_dssp TCCEEEECCTTSTT-----TCCBTTTEEEECTTCHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred CCCEEEecCCChHH-----HhhcCCceEEeCCCCHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999998753222 233345677776 8999999999999 69999999999999998 789999999999998
Q ss_pred Hhc
Q 012492 441 AAQ 443 (462)
Q Consensus 441 ~~~ 443 (462)
+++
T Consensus 382 ~~~ 384 (394)
T 2jjm_A 382 YYD 384 (394)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.6e-27 Score=234.39 Aligned_cols=276 Identities=12% Similarity=0.109 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHhhCCCEEEECCcccchHH-HHHHHHcCCCCCCeEEEEecCCCC--C---Cc-----ccccCCCcEEEEc
Q 012492 151 YYAKEVEAGLMEYKPDIIISVHPLMQHIP-LWVLKWQGLQKKVIFVTVITDLNT--C---HP-----TWFHPRVNRCYCP 219 (462)
Q Consensus 151 ~~~~~l~~~l~~~kPDvVi~~~~~~~~~~-~~~~~~~~~~~~iP~v~~~~d~~~--~---~~-----~~~~~~~d~~i~~ 219 (462)
....++.+++++++||+|++++......+ ..+++. .+||++.+...... . .+ .++.+.+|.++++
T Consensus 101 ~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~----~~IPv~h~~aglrs~~~~~~~p~~~~r~~~~~~a~~~~~~ 176 (403)
T 3ot5_A 101 RVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFY----QQKMLGHVEAGLRTWNKYSPFPEEMNRQLTGVMADIHFSP 176 (403)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHH----TTCEEEEESCCCCCSCTTSSTTHHHHHHHHHHHCSEEEES
T ss_pred HHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHH----hCCCEEEEECCccccccccCCcHHHHHHHHHHhcCEEECC
Confidence 44567889999999999999886544332 334444 48998876543211 0 11 1234457899999
Q ss_pred CHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccC--ChHHHHHHcCCCCCCcEEEEEeCCCCC--ccHHHHHHHHHHhhh
Q 012492 220 SKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVI--SKDNLRLELQMDPILPAVLLMGGGEGM--GPVKETAMALGESLL 295 (462)
Q Consensus 220 s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~--~~~~~r~~l~l~~~~~~iLv~gG~~~~--~~~~~~l~~l~~~l~ 295 (462)
++..++.+.+.|+++++|.++|||+.+.+..... .+...++++ ++.+++|+++|+... +....++.++ +.+.
T Consensus 177 se~~~~~l~~~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l---~~~~~vlv~~~r~~~~~~~l~~ll~a~-~~l~ 252 (403)
T 3ot5_A 177 TKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHPILENL---GDNRLILMTAHRRENLGEPMQGMFEAV-REIV 252 (403)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHSCTTCCCHHHHSC---TTCEEEEECCCCHHHHTTHHHHHHHHH-HHHH
T ss_pred CHHHHHHHHHcCCCcccEEEeCCchHHHHHhhhhhhcchHHHHhc---cCCCEEEEEeCcccccCcHHHHHHHHH-HHHH
Confidence 9999999999999989999999987554432111 123455555 455677777765321 2344445444 3443
Q ss_pred cccCCCCCceEEEEccCCHHHHHHHhh-ccCCCCeEEeccch--hHHHHHHhcchheecCChhhHHHHHHhCCCEEEecC
Q 012492 296 DKETGRPIGQLIIICGRNRTLASTLQS-EEWKIPVKVRGFET--QMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDY 372 (462)
Q Consensus 296 ~~~~~~~~~~~lvv~G~~~~l~~~~~~-~~~~~~V~~~g~~~--~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~ 372 (462)
+. .|++++++.+|++..+++.+++ ++...+|.++++.. ++..+|+.||++|++||+.+ +||+++|+|+|+++.
T Consensus 253 ~~---~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~SGg~~-~EA~a~g~PvV~~~~ 328 (403)
T 3ot5_A 253 ES---REDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDSGGVQ-EEAPGMGVPVLVLRD 328 (403)
T ss_dssp HH---CTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECCHHHH-HHGGGTTCCEEECCS
T ss_pred Hh---CCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECCccHH-HHHHHhCCCEEEecC
Confidence 31 4678888777877655556655 34457899999874 89999999999999997665 899999999999965
Q ss_pred CCCccccchHHHHHCCceeeeC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhcc
Q 012492 373 IPGQEKGNVPYVVDNGAGVFTR-SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQR 444 (462)
Q Consensus 373 ~~~~~~~n~~~l~~~G~g~~~~-~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~~ 444 (462)
.+++++ +++.|.++++. +++++++++.+++ +|++.+++|++++..+.+..++++|++.|.+++...
T Consensus 329 ~~~~~e-----~v~~g~~~lv~~d~~~l~~ai~~ll-~~~~~~~~m~~~~~~~g~~~aa~rI~~~l~~~l~~~ 395 (403)
T 3ot5_A 329 TTERPE-----GIEAGTLKLIGTNKENLIKEALDLL-DNKESHDKMAQAANPYGDGFAANRILAAIKSHFEET 395 (403)
T ss_dssp SCSCHH-----HHHHTSEEECCSCHHHHHHHHHHHH-HCHHHHHHHHHSCCTTCCSCHHHHHHHHHHHHHTCC
T ss_pred CCcchh-----heeCCcEEEcCCCHHHHHHHHHHHH-cCHHHHHHHHhhcCcccCCcHHHHHHHHHHHHhCCC
Confidence 444433 46778888886 8999999999999 799999999999889999999999999999988753
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-26 Score=232.06 Aligned_cols=343 Identities=15% Similarity=0.116 Sum_probs=226.0
Q ss_pred CCCeEEEEecC-CCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcC-Ccc
Q 012492 61 RTKNVLILMSD-TGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHST-SPK 138 (462)
Q Consensus 61 ~~~kIli~~~~-~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~-~~~ 138 (462)
++|||++++.. .+||+...+..|+++|.++|+ +|.+.... + . .. .+.. .. . ....+... ...
T Consensus 39 ~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~---~v~v~~~~----~-~-~~---~~~~-~~--~-~~~~~~~~~~~~ 102 (416)
T 2x6q_A 39 KGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGI---EARWFVIE----G-P-TE---FFNV-TK--T-FHNALQGNESLK 102 (416)
T ss_dssp TTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTC---EEEEEECC----C-C-HH---HHHH-HH--H-HHHHHTTCCSCC
T ss_pred hccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCC---eEEEEEcc----C-C-cc---hhhh-hc--c-cceeeccccccc
Confidence 56899999865 346999999999999999875 44433211 1 0 11 0110 00 0 00001110 000
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCc-------ccccC
Q 012492 139 WIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHP-------TWFHP 211 (462)
Q Consensus 139 ~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~-------~~~~~ 211 (462)
........ .....+.+.+.+++.+||+||++++...... .... .++|+|...|+...... .++..
T Consensus 103 ~~~~~~~~--~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~----~~~~--~~~p~v~~~h~~~~~~~~~~~~~~~~~~~ 174 (416)
T 2x6q_A 103 LTEEMKEL--YLNVNRENSKFIDLSSFDYVLVHDPQPAALI----EFYE--KKSPWLWRCHIDLSSPNREFWEFLRRFVE 174 (416)
T ss_dssp CCHHHHHH--HHHHHHHHHHSSCGGGSSEEEEESSTTGGGG----GGSC--CCSCEEEECCSCCSSCCHHHHHHHHHHHT
T ss_pred ccHHHHHH--HHHHHHHHHHHHhhcCCCEEEEeccchhhHH----HHHH--hcCCEEEEEccccCCccHHHHHHHHHHHH
Confidence 00000111 1123345667788899999999887654331 1111 24899887776432111 11234
Q ss_pred CCcEEE-EcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcc-c---CChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHH
Q 012492 212 RVNRCY-CPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRA-V---ISKDNLRLELQMDPILPAVLLMGGGEGMGPVKET 286 (462)
Q Consensus 212 ~~d~~i-~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~-~---~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~ 286 (462)
.+|.++ +.++... .+++..++.+++|+++...+.. . ..+..++++++++++.++++++|+....++...+
T Consensus 175 ~~~~~i~~~s~~~~-----~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~l 249 (416)
T 2x6q_A 175 KYDRYIFHLPEYVQ-----PELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDV 249 (416)
T ss_dssp TSSEEEESSGGGSC-----TTSCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHH
T ss_pred hCCEEEEechHHHH-----hhCCccceEEeCCCCChhhhcccccChhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHH
Confidence 567766 4444332 2456678999999998653321 1 1345678899998888877777766666677666
Q ss_pred HHHHHHhhhcccCCCCCceEEEEccCCH--------HHHHHHhhccCCCCeEEeccch-----hHHHHHHhcchheecC-
Q 012492 287 AMALGESLLDKETGRPIGQLIIICGRNR--------TLASTLQSEEWKIPVKVRGFET-----QMEKWMGACDCIITKA- 352 (462)
Q Consensus 287 l~~l~~~l~~~~~~~~~~~~lvv~G~~~--------~l~~~~~~~~~~~~V~~~g~~~-----~~~~l~~~aD~vV~~s- 352 (462)
++++ +.+.+. .|+++++++ |.+. .+.+..++++..++|+|.|+++ ++.++|+.||++|.+|
T Consensus 250 i~a~-~~l~~~---~~~~~l~i~-G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~ 324 (416)
T 2x6q_A 250 IEIY-RKVKEK---IPGVQLLLV-GVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSI 324 (416)
T ss_dssp HHHH-HHHHHH---CTTCEEEEE-ECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCS
T ss_pred HHHH-HHHHHh---CCCeEEEEE-ecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCC
Confidence 6655 445432 467776554 5541 2445556667788999999875 8999999999999988
Q ss_pred ---ChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcC-Cc
Q 012492 353 ---GPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQ-PE 428 (462)
Q Consensus 353 ---g~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~-~~ 428 (462)
.|++++|||++|+|+|+++.++ ..+.+.+.+.|++++++++++++|.+++ +|++.+++|++++++.+. .+
T Consensus 325 ~E~~~~~~lEAma~G~PvI~~~~~g-----~~e~i~~~~~g~l~~d~~~la~~i~~ll-~~~~~~~~~~~~a~~~~~~~f 398 (416)
T 2x6q_A 325 REGFGLTVTEAMWKGKPVIGRAVGG-----IKFQIVDGETGFLVRDANEAVEVVLYLL-KHPEVSKEMGAKAKERVRKNF 398 (416)
T ss_dssp SCSSCHHHHHHHHTTCCEEEESCHH-----HHHHCCBTTTEEEESSHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCccHHHHHHHcCCCEEEccCCC-----ChhheecCCCeEEECCHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHc
Confidence 4899999999999999998631 2333444457888889999999999999 799999999999999875 78
Q ss_pred HHHHHHHHHHHHHhc
Q 012492 429 AVVDIVKDIHDLAAQ 443 (462)
Q Consensus 429 ~~~~ia~~i~~l~~~ 443 (462)
+++.+++.+.+++++
T Consensus 399 s~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 399 IITKHMERYLDILNS 413 (416)
T ss_dssp BHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999998864
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=247.40 Aligned_cols=275 Identities=9% Similarity=0.043 Sum_probs=197.4
Q ss_pred HHHHHHHHh--hCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC----------------------c---
Q 012492 154 KEVEAGLME--YKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH----------------------P--- 206 (462)
Q Consensus 154 ~~l~~~l~~--~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~----------------------~--- 206 (462)
..+.+++++ .+||+||++.......+..+++. .++|+|...|+..... .
T Consensus 108 ~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~----~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (499)
T 2r60_A 108 NKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNI----KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIA 183 (499)
T ss_dssp HHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHH----HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHh----cCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHH
Confidence 456677887 58999999875443333334443 3799998888752100 0
Q ss_pred -ccccCCCcEEEEcCHHHHHHHHHc---C-C----CCCcEEEcCCCCChhhhcccCC---hHHHHHHcC-----CCCCCc
Q 012492 207 -TWFHPRVNRCYCPSKEVAKRASYF---G-L----EVSQIRVFGLPIRPSFVRAVIS---KDNLRLELQ-----MDPILP 269 (462)
Q Consensus 207 -~~~~~~~d~~i~~s~~~~~~l~~~---g-i----~~~~i~v~g~pv~~~~~~~~~~---~~~~r~~l~-----l~~~~~ 269 (462)
.+..+.+|.++++|+..++.+.+. | + +..++.+++|+++...+.+... +..+|++++ ++++.+
T Consensus 184 ~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 263 (499)
T 2r60_A 184 ERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELP 263 (499)
T ss_dssp HHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGGGTTSC
T ss_pred HHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhcCccchhhhHHHHHHHhcccccccCCCCc
Confidence 122356899999999999887764 6 6 7789999999998776554222 266788888 777777
Q ss_pred EEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccC------------------CHHHHHHHhhccCCCCeEE
Q 012492 270 AVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGR------------------NRTLASTLQSEEWKIPVKV 331 (462)
Q Consensus 270 ~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~------------------~~~l~~~~~~~~~~~~V~~ 331 (462)
+++++|+....++...+++++ +.+.+. .++...++++|. ..++.+.++++++.++|.|
T Consensus 264 ~i~~vGrl~~~Kg~~~li~a~-~~l~~~---~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~ 339 (499)
T 2r60_A 264 AIIASSRLDQKKNHYGLVEAY-VQNKEL---QDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSM 339 (499)
T ss_dssp EEEECSCCCGGGCHHHHHHHH-HTCHHH---HHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEE
T ss_pred EEEEeecCccccCHHHHHHHH-HHHHHh---CCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEE
Confidence 666665544456666666555 445431 123323445555 1235666677788899999
Q ss_pred eccc--hhHHHHHHhc----chheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHH
Q 012492 332 RGFE--TQMEKWMGAC----DCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKET 399 (462)
Q Consensus 332 ~g~~--~~~~~l~~~a----D~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~l 399 (462)
.|++ +++.++|+.| |++|.+|. |++++|||++|+|+|+++.++ ..+.+.+...|++++ |++++
T Consensus 340 ~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g-----~~e~v~~~~~g~l~~~~d~~~l 414 (499)
T 2r60_A 340 FPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGG-----PAEILDGGKYGVLVDPEDPEDI 414 (499)
T ss_dssp EECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBH-----HHHHTGGGTSSEEECTTCHHHH
T ss_pred CCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCC-----HHHHhcCCceEEEeCCCCHHHH
Confidence 9997 7999999999 99998873 899999999999999998532 223333334677764 79999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhhcCC-cHHHHHHHHHHHHHh
Q 012492 400 ARIVTEWFSTKTDELKRMSENALKLAQP-EAVVDIVKDIHDLAA 442 (462)
Q Consensus 400 a~~i~~ll~~d~~~~~~m~~~a~~~~~~-~~~~~ia~~i~~l~~ 442 (462)
+++|.+++ +|++.+++|++++++.+.. ++++.+++.+.++++
T Consensus 415 a~~i~~ll-~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~ 457 (499)
T 2r60_A 415 ARGLLKAF-ESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQ 457 (499)
T ss_dssp HHHHHHHH-SCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999 7999999999999998876 899888888877663
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-26 Score=233.54 Aligned_cols=267 Identities=18% Similarity=0.104 Sum_probs=192.2
Q ss_pred hhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC-c-------------c--------cccCCCcEEEEc
Q 012492 162 EYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH-P-------------T--------WFHPRVNRCYCP 219 (462)
Q Consensus 162 ~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~-~-------------~--------~~~~~~d~~i~~ 219 (462)
+.+||+|++++......+..+++. .++|+|...|+..... + . +..+.+|.++++
T Consensus 120 ~~~~Dii~~~~~~~~~~~~~~~~~----~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~ 195 (439)
T 3fro_A 120 EPLPDVVHFHDWHTVFAGALIKKY----FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTV 195 (439)
T ss_dssp SCCCSEEEEESGGGHHHHHHHHHH----HCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEES
T ss_pred CCCCeEEEecchhhhhhHHHHhhc----cCCCEEEEecccccccCchHHhCccccccccccceeeHhhhhhhhccEEEec
Confidence 459999999876554443444443 3899999999864210 0 0 112357999999
Q ss_pred CHHHHHHHHH-cCCCCCcEEEcCCCCChhhhccc-------CChHHHHHHcCCCCCCcEEEEEeCCC-CCccHHHHHHHH
Q 012492 220 SKEVAKRASY-FGLEVSQIRVFGLPIRPSFVRAV-------ISKDNLRLELQMDPILPAVLLMGGGE-GMGPVKETAMAL 290 (462)
Q Consensus 220 s~~~~~~l~~-~gi~~~~i~v~g~pv~~~~~~~~-------~~~~~~r~~l~l~~~~~~iLv~gG~~-~~~~~~~~l~~l 290 (462)
|+..++.... .+.+..++.+++|+++...+.+. ..+..++++++++++ ++++++|+.. ..++...+++++
T Consensus 196 S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~ 274 (439)
T 3fro_A 196 SRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAI 274 (439)
T ss_dssp CHHHHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHH
T ss_pred CHHHHHHHhhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHH
Confidence 9988877443 24677899999999988765542 135678889999876 6666666555 456666666555
Q ss_pred HHhhhcccCCCCCceEEEEccCCH-H----HHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC----hhhHHH
Q 012492 291 GESLLDKETGRPIGQLIIICGRNR-T----LASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG----PGTIAE 359 (462)
Q Consensus 291 ~~~l~~~~~~~~~~~~lvv~G~~~-~----l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg----~~t~~E 359 (462)
+.+.+.. ..++++++++ |.+. . +.+..++++ ..+.+.|++ +++.++|+.||++|.+|. |++++|
T Consensus 275 -~~l~~~~-~~~~~~l~i~-G~g~~~~~~~l~~~~~~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~E 349 (439)
T 3fro_A 275 -EILSSKK-EFQEMRFIII-GKGDPELEGWARSLEEKHG--NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALE 349 (439)
T ss_dssp -HHHHTSG-GGGGEEEEEE-CCCCHHHHHHHHHHHHHCT--TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHH
T ss_pred -HHHHhcc-cCCCeEEEEE-cCCChhHHHHHHHHHhhcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHH
Confidence 4554310 0157776654 5543 2 333344444 567789966 679999999999998873 899999
Q ss_pred HHHhCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHH
Q 012492 360 ALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDI 437 (462)
Q Consensus 360 Ala~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i 437 (462)
||++|+|+|+++.+ ....+++.|.|++++ |+++++++|.++++.|++.+++|++++++.++.++++.+++.+
T Consensus 350 Ama~G~Pvi~s~~~------~~~e~~~~~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 423 (439)
T 3fro_A 350 AMCLGAIPIASAVG------GLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERY 423 (439)
T ss_dssp HHHTTCEEEEESST------HHHHHCCTTTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHCCCCeEEcCCC------CcceeEEcCceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHH
Confidence 99999999999863 233455556787776 7999999999999328999999999999999889999999999
Q ss_pred HHHHhcc
Q 012492 438 HDLAAQR 444 (462)
Q Consensus 438 ~~l~~~~ 444 (462)
.+++++-
T Consensus 424 ~~~~~~~ 430 (439)
T 3fro_A 424 VKAYTGS 430 (439)
T ss_dssp HHHHHTC
T ss_pred HHHHHHH
Confidence 9998753
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-26 Score=230.45 Aligned_cols=340 Identities=12% Similarity=0.043 Sum_probs=221.6
Q ss_pred CCCeEEEEecC---CCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCc
Q 012492 61 RTKNVLILMSD---TGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSP 137 (462)
Q Consensus 61 ~~~kIli~~~~---~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~ 137 (462)
+||||+|++.. ..+|+...+..++++|.++|+ +|.+.......... ....... ...+...+..
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~---~V~v~~~~~~~~~~--~~~~~~~------~~~~~~~~~~--- 84 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGH---EVSVLAPASPHVKL--PDYVVSG------GKAVPIPYNG--- 84 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTC---EEEEEESCCTTSCC--CTTEEEC------CCCC---------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCC---eEEEEecCCccccC--CcccccC------CcEEeccccC---
Confidence 57899999853 335999999999999999875 44444322110000 0000000 0000000000
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCc---------cc
Q 012492 138 KWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHP---------TW 208 (462)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~---------~~ 208 (462)
..... .........+.+++++++||+|+++++........+++. .++|+|...|+...... .+
T Consensus 85 -~~~~~---~~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~----~~~~~i~~~h~~~~~~~~~~~~~~~~~~ 156 (406)
T 2gek_A 85 -SVARL---RFGPATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQA----AEGPIVATFHTSTTKSLTLSVFQGILRP 156 (406)
T ss_dssp ----------CCHHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHH----EESSEEEEECCCCCSHHHHHHHHSTTHH
T ss_pred -Ccccc---cccHHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHh----cCCCEEEEEcCcchhhhhHHHHHHHHHH
Confidence 00000 001123356778899999999999887655443344443 37899988888542110 03
Q ss_pred ccCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCC-CCCccHHHHH
Q 012492 209 FHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGG-EGMGPVKETA 287 (462)
Q Consensus 209 ~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~-~~~~~~~~~l 287 (462)
..+.+|.+++.|+..++.+.+ +++.+++ +++|+++...+.+...+ .+++++.+.++++|+. ...++...++
T Consensus 157 ~~~~~d~ii~~s~~~~~~~~~-~~~~~~~-vi~~~v~~~~~~~~~~~------~~~~~~~~~i~~~G~~~~~~Kg~~~li 228 (406)
T 2gek_A 157 YHEKIIGRIAVSDLARRWQME-ALGSDAV-EIPNGVDVASFADAPLL------DGYPREGRTVLFLGRYDEPRKGMAVLL 228 (406)
T ss_dssp HHTTCSEEEESSHHHHHHHHH-HHSSCEE-ECCCCBCHHHHHTCCCC------TTCSCSSCEEEEESCTTSGGGCHHHHH
T ss_pred HHhhCCEEEECCHHHHHHHHH-hcCCCcE-EecCCCChhhcCCCchh------hhccCCCeEEEEEeeeCccccCHHHHH
Confidence 346789999999999888866 3445678 99999987755432111 1233345666666655 4456666666
Q ss_pred HHHHHhhhcccCCCCCceEEEEccCCH--HHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC-----hhhHH
Q 012492 288 MALGESLLDKETGRPIGQLIIICGRNR--TLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG-----PGTIA 358 (462)
Q Consensus 288 ~~l~~~l~~~~~~~~~~~~lvv~G~~~--~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg-----~~t~~ 358 (462)
+++ +.+.+ +.|+++++++ |.+. .+.+.++++ .++|.+.|++ +++.++|+.||++|.+|. |++++
T Consensus 229 ~a~-~~l~~---~~~~~~l~i~-G~~~~~~l~~~~~~~--~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~ 301 (406)
T 2gek_A 229 AAL-PKLVA---RFPDVEILIV-GRGDEDELREQAGDL--AGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLV 301 (406)
T ss_dssp HHH-HHHHT---TSTTCEEEEE-SCSCHHHHHHHTGGG--GGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHH
T ss_pred HHH-HHHHH---HCCCeEEEEE-cCCcHHHHHHHHHhc--cCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHH
Confidence 554 45544 2467876654 5543 344444443 5789999999 466999999999998874 88999
Q ss_pred HHHHhCCCEEEecCCCCccccchHHHHHCCceeee--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHH
Q 012492 359 EALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFT--RSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKD 436 (462)
Q Consensus 359 EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~--~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~ 436 (462)
|||++|+|+|+++.++ ..+.+.+.+.|+++ .++++++++|.+++ +|++.+++|++++++.+..++++++++.
T Consensus 302 Ea~a~G~PvI~~~~~~-----~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 375 (406)
T 2gek_A 302 EAMAAGTAVVASDLDA-----FRRVLADGDAGRLVPVDDADGMAAALIGIL-EDDQLRAGYVARASERVHRYDWSVVSAQ 375 (406)
T ss_dssp HHHHHTCEEEECCCHH-----HHHHHTTTTSSEECCTTCHHHHHHHHHHHH-HCHHHHHHHHHHHHHHGGGGBHHHHHHH
T ss_pred HHHHcCCCEEEecCCc-----HHHHhcCCCceEEeCCCCHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 9999999999998621 23334444567777 58999999999999 6999999999999999888999999999
Q ss_pred HHHHHhc
Q 012492 437 IHDLAAQ 443 (462)
Q Consensus 437 i~~l~~~ 443 (462)
+.+++++
T Consensus 376 ~~~~~~~ 382 (406)
T 2gek_A 376 IMRVYET 382 (406)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887753
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.9e-27 Score=233.37 Aligned_cols=344 Identities=13% Similarity=0.046 Sum_probs=231.7
Q ss_pred CCCeEEEEec---CCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCc
Q 012492 61 RTKNVLILMS---DTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSP 137 (462)
Q Consensus 61 ~~~kIli~~~---~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~ 137 (462)
+||||++++. +..||+...+..|+++| +|+ .+.++..+. .... ...+.. .....+.....
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~-~v~v~~~~~-------~~~~-~~~~~~------~~~~~~~~~~~ 65 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPE-SIVVFASTQ-------NAEE-AHAYDK------TLDYEVIRWPR 65 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGG-GEEEEEECS-------SHHH-HHHHHT------TCSSEEEEESS
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCC-eEEEEECCC-------Cccc-hhhhcc------ccceEEEEccc
Confidence 5789999985 22369999999999999 354 233333211 1100 011110 00000000000
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCe-EEEEecCCCCCC---------cc
Q 012492 138 KWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVI-FVTVITDLNTCH---------PT 207 (462)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP-~v~~~~d~~~~~---------~~ 207 (462)
..... .......+.+++++.+||+|+++++........+++. .++| +|...|+..... ..
T Consensus 66 ~~~~~------~~~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~----~~~~~~i~~~h~~~~~~~~~~~~~~~~~ 135 (394)
T 3okp_A 66 SVMLP------TPTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQ----AGASKVIASTHGHEVGWSMLPGSRQSLR 135 (394)
T ss_dssp SSCCS------CHHHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHH----TTCSEEEEECCSTHHHHTTSHHHHHHHH
T ss_pred ccccc------chhhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHh----cCCCcEEEEeccchhhhhhcchhhHHHH
Confidence 00000 1234456778899999999999886554443344554 3676 666666542100 01
Q ss_pred cccCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcc-c-CChHHHHHHcCCCCCCcEEEEEeCCCCCccHHH
Q 012492 208 WFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRA-V-ISKDNLRLELQMDPILPAVLLMGGGEGMGPVKE 285 (462)
Q Consensus 208 ~~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~-~-~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~ 285 (462)
++.+.+|.++++|+..++.+.+.+.+..++.+++|+++...+.+ . ..+..++++++++++.++++++|+....++...
T Consensus 136 ~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~ 215 (394)
T 3okp_A 136 KIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDS 215 (394)
T ss_dssp HHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHH
T ss_pred HHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCCcCceEEEEEeccccccCHHH
Confidence 23466899999999999998876545688999999998876543 1 234678899999887777766665544555666
Q ss_pred HHHHHHHhhhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecC--------
Q 012492 286 TAMALGESLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKA-------- 352 (462)
Q Consensus 286 ~l~~l~~~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~s-------- 352 (462)
+++++ +.+.+. .+++++++ +|.+. .+.+.. .++.++|.+.|++ +++.++|+.||++|.+|
T Consensus 216 li~a~-~~l~~~---~~~~~l~i-~G~g~~~~~l~~~~--~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~ 288 (394)
T 3okp_A 216 LIKAM-PQVIAA---RPDAQLLI-VGSGRYESTLRRLA--TDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLD 288 (394)
T ss_dssp HHHHH-HHHHHH---STTCEEEE-ECCCTTHHHHHHHT--GGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTB
T ss_pred HHHHH-HHHHhh---CCCeEEEE-EcCchHHHHHHHHH--hcccCeEEEcCCCCHHHHHHHHHhCCEEEecCcccccccc
Confidence 66544 455442 46777655 45543 122322 4566899999999 89999999999999754
Q ss_pred ---ChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC
Q 012492 353 ---GPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLAQP 427 (462)
Q Consensus 353 ---g~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~ 427 (462)
.|++++|||++|+|+|+++.++..+ +++.|.|++++ ++++++++|.+++ +|++.+++|++++++.+..
T Consensus 289 ~e~~~~~~~Ea~a~G~PvI~~~~~~~~e------~i~~~~g~~~~~~d~~~l~~~i~~l~-~~~~~~~~~~~~~~~~~~~ 361 (394)
T 3okp_A 289 VEGLGIVYLEAQACGVPVIAGTSGGAPE------TVTPATGLVVEGSDVDKLSELLIELL-DDPIRRAAMGAAGRAHVEA 361 (394)
T ss_dssp CCSSCHHHHHHHHTTCCEEECSSTTGGG------GCCTTTEEECCTTCHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHH
T ss_pred ccccCcHHHHHHHcCCCEEEeCCCChHH------HHhcCCceEeCCCCHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHH
Confidence 3789999999999999998753222 34445788776 8999999999999 7999999999999998864
Q ss_pred -cHHHHHHHHHHHHHhccC
Q 012492 428 -EAVVDIVKDIHDLAAQRG 445 (462)
Q Consensus 428 -~~~~~ia~~i~~l~~~~~ 445 (462)
++++.+++.+.+++++-.
T Consensus 362 ~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 362 EWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp HTBHHHHHHHHHHHHHSCC
T ss_pred hCCHHHHHHHHHHHHHHhc
Confidence 899999999999997653
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-27 Score=237.66 Aligned_cols=345 Identities=15% Similarity=0.108 Sum_probs=219.7
Q ss_pred CCCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEecccc-----ccCCCchhhH----HHHHHHHhhhHHHHHH
Q 012492 61 RTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKE-----YAGWPLNDME----RSYKFMVKHVQLWKVA 131 (462)
Q Consensus 61 ~~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~-----~~~~~~~~~~----~~y~~~~~~~~l~~~~ 131 (462)
.+|||+|++++. +||..++.+|+++|+++|| +|.+...... ..+.....+. ..+.. .+...
T Consensus 19 ~~MrIl~~~~~~-~Gh~~~~~~la~~L~~~Gh---eV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------~~~~~ 88 (412)
T 3otg_A 19 RHMRVLFASLGT-HGHTYPLLPLATAARAAGH---EVTFATGEGFAGTLRKLGFEPVATGMPVFDGFLA------ALRIR 88 (412)
T ss_dssp CSCEEEEECCSS-HHHHGGGHHHHHHHHHTTC---EEEEEECGGGHHHHHHTTCEEEECCCCHHHHHHH------HHHHH
T ss_pred ceeEEEEEcCCC-cccHHHHHHHHHHHHHCCC---EEEEEccHHHHHHHHhcCCceeecCcccccchhh------hhhhh
Confidence 568999999886 6999999999999999986 4444321100 0111111110 00000 00000
Q ss_pred hhcCC---------cchhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCC
Q 012492 132 FHSTS---------PKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLN 202 (462)
Q Consensus 132 ~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~ 202 (462)
+.... .......+..........++.+++++++||+||+++..... ..+++. .++|+|.+.++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~--~~aa~~----~giP~v~~~~~~~ 162 (412)
T 3otg_A 89 FDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGA--GLAALK----AGIPTICHGVGRD 162 (412)
T ss_dssp HSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHH--HHHHHH----HTCCEEEECCSCC
T ss_pred hcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHH--HHHHHH----cCCCEEEeccccc
Confidence 00000 00011111111022344678889999999999998655443 244554 3899988766643
Q ss_pred CCCcc-------c----------------ccCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHH
Q 012492 203 TCHPT-------W----------------FHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLR 259 (462)
Q Consensus 203 ~~~~~-------~----------------~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r 259 (462)
. .+. | .....|.+++.++...+..... +...+++++......... +
T Consensus 163 ~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~----~ 231 (412)
T 3otg_A 163 T-PDDLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFR------ARPRRHELRPVPFAEQGD----L 231 (412)
T ss_dssp C-CSHHHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHH------TCTTEEECCCCCCCCCCC----C
T ss_pred C-chhhhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCccc------CCCCcceeeccCCCCCCC----C
Confidence 1 100 0 1123456676665544333221 111122222111110001 1
Q ss_pred HHc--CCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchh
Q 012492 260 LEL--QMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQ 337 (462)
Q Consensus 260 ~~l--~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~ 337 (462)
..+ ..+++.+++++++|+.+ ++..+.+..+++.+.+ .++++++++|.+. ..+.++ ++..+|.+.||+ +
T Consensus 232 ~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~-----~~~~~~~~~g~~~-~~~~l~--~~~~~v~~~~~~-~ 301 (412)
T 3otg_A 232 PAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAG-----LDADVLVASGPSL-DVSGLG--EVPANVRLESWV-P 301 (412)
T ss_dssp CGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHT-----SSSEEEEECCSSC-CCTTCC--CCCTTEEEESCC-C
T ss_pred CCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHc-----CCCEEEEEECCCC-Chhhhc--cCCCcEEEeCCC-C
Confidence 112 22456788999999887 4455666666666654 2567888888764 122232 346799999999 7
Q ss_pred HHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHH
Q 012492 338 MEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDE 413 (462)
Q Consensus 338 ~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~ 413 (462)
+.++|+.||++|+++|++|++|||++|+|+|++|.. ++|..|++.+.+.|+|..+. +++++++++.+++ +|++.
T Consensus 302 ~~~~l~~ad~~v~~~g~~t~~Ea~a~G~P~v~~p~~-~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll-~~~~~ 379 (412)
T 3otg_A 302 QAALLPHVDLVVHHGGSGTTLGALGAGVPQLSFPWA-GDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLL-AEESY 379 (412)
T ss_dssp HHHHGGGCSEEEESCCHHHHHHHHHHTCCEEECCCS-TTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHH-HCHHH
T ss_pred HHHHHhcCcEEEECCchHHHHHHHHhCCCEEecCCc-hhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHH-hCHHH
Confidence 999999999999999999999999999999999876 44566999999999999886 6899999999999 79999
Q ss_pred HHHHHHHHHhhcCCcHHHHHHHHHHHHHhcc
Q 012492 414 LKRMSENALKLAQPEAVVDIVKDIHDLAAQR 444 (462)
Q Consensus 414 ~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~~ 444 (462)
+++|++.+++++..++++++++.+++++.+.
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 410 (412)
T 3otg_A 380 RAGARAVAAEIAAMPGPDEVVRLLPGFASRS 410 (412)
T ss_dssp HHHHHHHHHHHHHSCCHHHHHTTHHHHHC--
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHhccc
Confidence 9999999999999999999999999998653
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-27 Score=234.05 Aligned_cols=342 Identities=15% Similarity=0.137 Sum_probs=226.7
Q ss_pred CeEEEEec---CCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcch
Q 012492 63 KNVLILMS---DTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKW 139 (462)
Q Consensus 63 ~kIli~~~---~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 139 (462)
|||++++. +. ||....+..++++|+++|++ +.++..+... .. ...+ +....... .
T Consensus 1 MkIl~i~~~~~~~-gG~~~~~~~l~~~L~~~G~~-V~v~~~~~~~---~~-~~~~-----------~v~~~~~~-----~ 58 (374)
T 2iw1_A 1 MIVAFCLYKYFPF-GGLQRDFMRIASTVAARGHH-VRVYTQSWEG---DC-PKAF-----------ELIQVPVK-----S 58 (374)
T ss_dssp -CEEEECSEECTT-CHHHHHHHHHHHHHHHTTCC-EEEEESEECS---CC-CTTC-----------EEEECCCC-----C
T ss_pred CeEEEEEeecCCC-cchhhHHHHHHHHHHhCCCe-EEEEecCCCC---CC-CCCc-----------EEEEEccC-----c
Confidence 79999964 34 59999999999999999863 2333221110 00 0000 00000000 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC-CCc---------ccc
Q 012492 140 IHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT-CHP---------TWF 209 (462)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~-~~~---------~~~ 209 (462)
.... .....+...+.+.+++.+||+|+++..........+++ ...+|.+...+.... ... .+.
T Consensus 59 ~~~~---~~~~~~~~~l~~~i~~~~~Dvv~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 2iw1_A 59 HTNH---GRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAAD----VCYAEKVAQEKGFLYRLTSRYRHYAAFERAT 131 (374)
T ss_dssp SSHH---HHHHHHHHHHHHHHHHSCCSEEEESSCCTTCSEEECCS----CCHHHHHHHHCCHHHHTSHHHHHHHHHHHHH
T ss_pred ccch---hhHHHHHHHHHHHHhccCCCEEEEecCCCCceeeeccc----cccceeeeecccchhhhcHHHHHHHHHHHHH
Confidence 0000 01123345677889999999999887533211000000 012232211111100 000 001
Q ss_pred --cCCCcEEEEcCHHHHHHHHH-cCCCCCcEEEcCCCCChhhhcccC---ChHHHHHHcCCCCCCcEEEEEeCCCCCccH
Q 012492 210 --HPRVNRCYCPSKEVAKRASY-FGLEVSQIRVFGLPIRPSFVRAVI---SKDNLRLELQMDPILPAVLLMGGGEGMGPV 283 (462)
Q Consensus 210 --~~~~d~~i~~s~~~~~~l~~-~gi~~~~i~v~g~pv~~~~~~~~~---~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~ 283 (462)
.+.+|.++++|+..++.+.+ .|++..++.+++|+++...+.+.. .++.++++++++++.++++++|+....++.
T Consensus 132 ~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~ 211 (374)
T 2iw1_A 132 FEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGV 211 (374)
T ss_dssp HSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTH
T ss_pred hhccCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhCCCCCCeEEEEeccchhhcCH
Confidence 12689999999999998876 488888999999999877655422 245788999998777777777665555666
Q ss_pred HHHHHHHHHhhhcccCCCCCceEEEEccCC--HHHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecC----ChhhH
Q 012492 284 KETAMALGESLLDKETGRPIGQLIIICGRN--RTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKA----GPGTI 357 (462)
Q Consensus 284 ~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~--~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~s----g~~t~ 357 (462)
..+++++ +.+.+.. .++++++++ |.+ .++.+.++++++.++|++.|+.+++.++|+.||++|.+| .|+++
T Consensus 212 ~~li~a~-~~l~~~~--~~~~~l~i~-G~g~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~ps~~e~~~~~~ 287 (374)
T 2iw1_A 212 DRSIEAL-ASLPESL--RHNTLLFVV-GQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVL 287 (374)
T ss_dssp HHHHHHH-HTSCHHH--HHTEEEEEE-SSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCSCCSSCHHH
T ss_pred HHHHHHH-HHhHhcc--CCceEEEEE-cCCCHHHHHHHHHHcCCCCcEEECCCcccHHHHHHhcCEEEeccccCCcccHH
Confidence 6666554 4453310 146666554 443 246666777777889999999999999999999999877 48999
Q ss_pred HHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC---CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHH
Q 012492 358 AEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR---SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIV 434 (462)
Q Consensus 358 ~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~---~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia 434 (462)
+|||++|+|+|+++.++ +.+.+.+.+.|++++ ++++++++|.+++ +|++.+++|++++++.+..++++.++
T Consensus 288 ~Ea~a~G~Pvi~~~~~~-----~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (374)
T 2iw1_A 288 LEAITAGLPVLTTAVCG-----YAHYIADANCGTVIAEPFSQEQLNEVLRKAL-TQSPLRMAWAENARHYADTQDLYSLP 361 (374)
T ss_dssp HHHHHHTCCEEEETTST-----TTHHHHHHTCEEEECSSCCHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHSCCSCHH
T ss_pred HHHHHCCCCEEEecCCC-----chhhhccCCceEEeCCCCCHHHHHHHHHHHH-cChHHHHHHHHHHHHHHHHhhHHHHH
Confidence 99999999999998743 344566667888875 7999999999999 69999999999999998888788888
Q ss_pred HHHHHHHhc
Q 012492 435 KDIHDLAAQ 443 (462)
Q Consensus 435 ~~i~~l~~~ 443 (462)
+.+.+++++
T Consensus 362 ~~~~~~l~~ 370 (374)
T 2iw1_A 362 EKAADIITG 370 (374)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHH
Confidence 888887764
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.2e-25 Score=220.67 Aligned_cols=335 Identities=13% Similarity=0.142 Sum_probs=218.3
Q ss_pred CeEEEEec--CCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhH---HHHHHHHhhhHHHHHHhhcCCc
Q 012492 63 KNVLILMS--DTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDME---RSYKFMVKHVQLWKVAFHSTSP 137 (462)
Q Consensus 63 ~kIli~~~--~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~---~~y~~~~~~~~l~~~~~~~~~~ 137 (462)
|||+|++. +.+||....+..|+++|.++ | +|.+...... ......... ..... ..+....
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~---~V~v~~~~~~-g~~~~~~~~~~~~~~~~----------~~~~~~~ 65 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-H---EVIVFGIHAF-GRSVHANIEEFDAQTAE----------HVRGLNE 65 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-S---EEEEEEESCC-SCCSCSSSEEEEHHHHH----------HHTTCCS
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-C---CeEEEeecCC-CcccccccccCCccccc----------ccccccc
Confidence 79999973 45579999999999999998 5 3333322111 101111100 00000 0010000
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCC---CcccccCCCc
Q 012492 138 KWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTC---HPTWFHPRVN 214 (462)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~---~~~~~~~~~d 214 (462)
.. +...++.+.+++.+||+|+++.... .....+++..+.....+++...+..... ...|+.+.+|
T Consensus 66 ~~-----------~~~~~l~~~l~~~~~Div~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (413)
T 3oy2_A 66 QG-----------FYYSGLSEFIDVHKPDIVMIYNDPI-VIGNYLLAMGKCSHRTKIVLYVDLVSKNIRENLWWIFSHPK 133 (413)
T ss_dssp TT-----------CCHHHHHHHHHHHCCSEEEEEECHH-HHHHHHHHGGGCCSCCEEEEEECCCSBSCCGGGGGGGGCTT
T ss_pred cc-----------chHHHHHHHHHhcCCCEEEEcchHH-HHHHHHHHhccCCCCCceeeeccccchhhHHHHHHHHhccC
Confidence 00 1112345668899999999984332 2222333332211123444444443211 1135566767
Q ss_pred --EEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCC--CCcEEEEEeCCCCCccHHHHHHHH
Q 012492 215 --RCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDP--ILPAVLLMGGGEGMGPVKETAMAL 290 (462)
Q Consensus 215 --~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~--~~~~iLv~gG~~~~~~~~~~l~~l 290 (462)
.++++|+..++.+.+.|+ +.++.+++|+++...+ ...++++++++ +.++++++|+....++...+++++
T Consensus 134 ~~~ii~~S~~~~~~~~~~~~-~~~~~vi~ngvd~~~~------~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~ 206 (413)
T 3oy2_A 134 VVGVMAMSKCWISDICNYGC-KVPINIVSHFVDTKTI------YDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAA 206 (413)
T ss_dssp EEEEEESSTHHHHHHHHTTC-CSCEEECCCCCCCCCC------TTHHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHH
T ss_pred CceEEEcCHHHHHHHHHcCC-CCceEEeCCCCCHHHH------HHHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHH
Confidence 999999999999998877 5789999999987654 24567788876 666555555544455566666555
Q ss_pred HHhhhcccCCCCCceEEEEccCC--------HHHHHHHhhccCCCC-------eEEeccc--hhHHHHHHhcchheecCC
Q 012492 291 GESLLDKETGRPIGQLIIICGRN--------RTLASTLQSEEWKIP-------VKVRGFE--TQMEKWMGACDCIITKAG 353 (462)
Q Consensus 291 ~~~l~~~~~~~~~~~~lvv~G~~--------~~l~~~~~~~~~~~~-------V~~~g~~--~~~~~l~~~aD~vV~~sg 353 (462)
+.+.+. .|+++++++++.. ..+.+.++++++.++ +.+.|++ +++.++|+.||++|.+|.
T Consensus 207 -~~l~~~---~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~ 282 (413)
T 3oy2_A 207 -ARFISK---YPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSS 282 (413)
T ss_dssp -HHHHHH---CTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCS
T ss_pred -HHHHHh---CCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCC
Confidence 444432 4678776654332 334555666778776 7788997 599999999999998874
Q ss_pred ----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCc----------------ee--ee--CCHHHHHHHHHHHhcC
Q 012492 354 ----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGA----------------GV--FT--RSPKETARIVTEWFST 409 (462)
Q Consensus 354 ----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~----------------g~--~~--~~~~~la~~i~~ll~~ 409 (462)
|++++|||++|+|+|+++.++ ...+++.|. |+ ++ .++++++++| +++ +
T Consensus 283 ~E~~~~~~lEAma~G~PvI~s~~~g------~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~-~ 354 (413)
T 3oy2_A 283 GEGFGLCSAEGAVLGKPLIISAVGG------ADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFF-K 354 (413)
T ss_dssp CCSSCHHHHHHHTTTCCEEEECCHH------HHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHT-T
T ss_pred cCCCCcHHHHHHHcCCCEEEcCCCC------hHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHh-c
Confidence 889999999999999998642 222333322 33 43 5899999999 999 7
Q ss_pred CHHHHHHHHHHHHhhc-CCcHHHHHHHHHHHHHhc
Q 012492 410 KTDELKRMSENALKLA-QPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 410 d~~~~~~m~~~a~~~~-~~~~~~~ia~~i~~l~~~ 443 (462)
|++.+++|++++++.+ +.++++.+++.+++++++
T Consensus 355 ~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 355 DEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp SHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9999999999999987 578999999999988764
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-25 Score=226.43 Aligned_cols=352 Identities=12% Similarity=0.026 Sum_probs=213.1
Q ss_pred cCCCCCCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEecccc-----ccCCCchhhHHHHHHHHhhhHHHHHH
Q 012492 57 IGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKE-----YAGWPLNDMERSYKFMVKHVQLWKVA 131 (462)
Q Consensus 57 ~~~~~~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~-----~~~~~~~~~~~~y~~~~~~~~l~~~~ 131 (462)
.+.+.||||+|++.+. .||..++.+|+++|+++|| +|.+...... ..+..+..+...+.. .......
T Consensus 15 ~~~~~m~rIl~~~~~~-~GHv~p~l~La~~L~~~Gh---~V~v~~~~~~~~~~~~~G~~~~~~~~~~~~----~~~~~~~ 86 (415)
T 3rsc_A 15 IEGRHMAHLLIVNVAS-HGLILPTLTVVTELVRRGH---RVSYVTAGGFAEPVRAAGATVVPYQSEIID----ADAAEVF 86 (415)
T ss_dssp ----CCCEEEEECCSC-HHHHGGGHHHHHHHHHTTC---EEEEEECGGGHHHHHHTTCEEEECCCSTTT----CCHHHHH
T ss_pred cCcccCCEEEEEeCCC-ccccccHHHHHHHHHHCCC---EEEEEeCHHHHHHHHhcCCEEEeccccccc----cccchhh
Confidence 3455789999999875 7999999999999999986 4444421100 001100000000000 0000000
Q ss_pred hhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCccccc-
Q 012492 132 FHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFH- 210 (462)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~- 210 (462)
........+...+ ..........+.+.+++++||+||++++.... ...+++. .++|++.+.+++. .+..|..
T Consensus 87 ~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~-~~~aA~~----~giP~v~~~~~~~-~~~~~~~~ 159 (415)
T 3rsc_A 87 GSDDLGVRPHLMY-LRENVSVLRATAEALDGDVPDLVLYDDFPFIA-GQLLAAR----WRRPAVRLSAAFA-SNEHYSFS 159 (415)
T ss_dssp HSSSSCHHHHHHH-HHHHHHHHHHHHHHHSSSCCSEEEEESTTHHH-HHHHHHH----TTCCEEEEESSCC-CCSSCCHH
T ss_pred ccccHHHHHHHHH-HHHHHHHHHHHHHHHhccCCCEEEECchhhhH-HHHHHHH----hCCCEEEEEeccc-ccCccccc
Confidence 0000000111101 11122345678889999999999987332222 1334554 4899998887653 1221111
Q ss_pred --------CCCcEEEE-cCHHHHHHHHHcCCC-----------------------------CCcEEEcCCCCChhhhccc
Q 012492 211 --------PRVNRCYC-PSKEVAKRASYFGLE-----------------------------VSQIRVFGLPIRPSFVRAV 252 (462)
Q Consensus 211 --------~~~d~~i~-~s~~~~~~l~~~gi~-----------------------------~~~i~v~g~pv~~~~~~~~ 252 (462)
........ ......+.+.+.|++ +.++.++|.++....
T Consensus 160 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~~---- 235 (415)
T 3rsc_A 160 QDMVTLAGTIDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTFDDRFVFVGPCFDDRR---- 235 (415)
T ss_dssp HHHHHHHTCCCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGCCTTEEECCCCCCCCG----
T ss_pred cccccccccCChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccCCCceEEeCCCCCCcc----
Confidence 00000000 000111112223332 123444443332110
Q ss_pred CChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEe
Q 012492 253 ISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVR 332 (462)
Q Consensus 253 ~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~ 332 (462)
........+++.++|++++|+.+... .+.+..+++.+.+ . ++++++++|.+.. .+.++ ....|+.+.
T Consensus 236 ----~~~~~~~~~~~~~~v~v~~Gs~~~~~-~~~~~~~~~al~~----~-~~~~v~~~g~~~~-~~~l~--~~~~~v~~~ 302 (415)
T 3rsc_A 236 ----FLGEWTRPADDLPVVLVSLGTTFNDR-PGFFRDCARAFDG----Q-PWHVVMTLGGQVD-PAALG--DLPPNVEAH 302 (415)
T ss_dssp ----GGCCCCCCSSCCCEEEEECTTTSCCC-HHHHHHHHHHHTT----S-SCEEEEECTTTSC-GGGGC--CCCTTEEEE
T ss_pred ----cCcCccccCCCCCEEEEECCCCCCCh-HHHHHHHHHHHhc----C-CcEEEEEeCCCCC-hHHhc--CCCCcEEEE
Confidence 00001111346788999988876543 3455556566543 2 3788888887632 12232 345799999
Q ss_pred ccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhc
Q 012492 333 GFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFS 408 (462)
Q Consensus 333 g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~ 408 (462)
+|++++ ++|+.||++|+++|++|++||+++|+|+|+.|. .++|..|+..+.+.|+|..+. +++.+++++.+++
T Consensus 303 ~~~~~~-~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~-~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll- 379 (415)
T 3rsc_A 303 RWVPHV-KVLEQATVCVTHGGMGTLMEALYWGRPLVVVPQ-SFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVA- 379 (415)
T ss_dssp SCCCHH-HHHHHEEEEEESCCHHHHHHHHHTTCCEEECCC-SGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHH-
T ss_pred ecCCHH-HHHhhCCEEEECCcHHHHHHHHHhCCCEEEeCC-cchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHH-
Confidence 999887 999999999999999999999999999999987 445667999999999998875 6789999999999
Q ss_pred CCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 409 TKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 409 ~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
+|++.+++|++.++++....+++++++.|++++.+
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 380 ADPALLARVEAMRGHVRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp TCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence 79999999999999999999999999999998753
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.3e-25 Score=219.22 Aligned_cols=346 Identities=11% Similarity=0.060 Sum_probs=214.1
Q ss_pred CCCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEecccc-----ccCCCchhhHHHHHHHHhhhHHHHHHhhcC
Q 012492 61 RTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKE-----YAGWPLNDMERSYKFMVKHVQLWKVAFHST 135 (462)
Q Consensus 61 ~~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~-----~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~ 135 (462)
.||||+|++.+. .||..+..+|+++|+++|| +|.+...... ..+..+..+...+ +.....-...
T Consensus 3 ~M~~il~~~~~~-~Ghv~~~~~La~~L~~~Gh---eV~v~~~~~~~~~~~~~G~~~~~~~~~~-------~~~~~~~~~~ 71 (402)
T 3ia7_A 3 RQRHILFANVQG-HGHVYPSLGLVSELARRGH---RITYVTTPLFADEVKAAGAEVVLYKSEF-------DTFHVPEVVK 71 (402)
T ss_dssp CCCEEEEECCSS-HHHHHHHHHHHHHHHHTTC---EEEEEECHHHHHHHHHTTCEEEECCCGG-------GTSSSSSSSC
T ss_pred CCCEEEEEeCCC-CcccccHHHHHHHHHhCCC---EEEEEcCHHHHHHHHHcCCEEEeccccc-------cccccccccc
Confidence 356999998875 7999999999999999986 4444421000 0011000000000 0000000000
Q ss_pred CcchhhHHH--HHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCccccc---
Q 012492 136 SPKWIHSCY--LAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFH--- 210 (462)
Q Consensus 136 ~~~~~~~~~--~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~--- 210 (462)
......... ...........+.+.+++++||+||++++.... ...+++. .++|+|.+.+++.. +..|..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~-~~~aA~~----~giP~v~~~~~~~~-~~~~~~~~~ 145 (402)
T 3ia7_A 72 QEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIA-GRLLAAR----WDRPAVRLTGGFAA-NEHYSLFKE 145 (402)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHH-HHHHHHH----HTCCEEEEESSCCC-BTTBCHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHH-HHHHHHh----hCCCEEEEeccccc-Ccccccccc
Confidence 000111110 011122345678889999999999998432222 2334444 38999988766531 111111
Q ss_pred --------------------------------------CCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhccc
Q 012492 211 --------------------------------------PRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAV 252 (462)
Q Consensus 211 --------------------------------------~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~ 252 (462)
...+..++..+...+.... .. +.++.++|+++....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~-~~~~~~vGp~~~~~~---- 219 (402)
T 3ia7_A 146 LWKSNGQRHPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAE-TF-DERFAFVGPTLTGRD---- 219 (402)
T ss_dssp HHHHHTCCCGGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGG-GC-CTTEEECCCCCCC------
T ss_pred ccccccccChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccc-cC-CCCeEEeCCCCCCcc----
Confidence 0002233322222111100 01 123555554332110
Q ss_pred CChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEe
Q 012492 253 ISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVR 332 (462)
Q Consensus 253 ~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~ 332 (462)
........++++++|++++|+.+... .+.+..+++.+.+ .++++++++|.+.. .+.++ ....|+.+.
T Consensus 220 ----~~~~~~~~~~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~g~~~~-~~~~~--~~~~~v~~~ 286 (402)
T 3ia7_A 220 ----GQPGWQPPRPDAPVLLVSLGNQFNEH-PEFFRACAQAFAD-----TPWHVVMAIGGFLD-PAVLG--PLPPNVEAH 286 (402)
T ss_dssp ------CCCCCSSTTCCEEEEECCSCSSCC-HHHHHHHHHHHTT-----SSCEEEEECCTTSC-GGGGC--SCCTTEEEE
T ss_pred ----cCCCCcccCCCCCEEEEECCCCCcch-HHHHHHHHHHHhc-----CCcEEEEEeCCcCC-hhhhC--CCCCcEEEe
Confidence 00001111346678899988887654 3455566666643 23678888887632 12232 246799999
Q ss_pred ccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhc
Q 012492 333 GFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFS 408 (462)
Q Consensus 333 g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~ 408 (462)
||.+++ ++|+.||++|+++|++|++||+++|+|+|+.|.+.++|..|+..+.+.|+|..+. +++.+++++.+++
T Consensus 287 ~~~~~~-~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll- 364 (402)
T 3ia7_A 287 QWIPFH-SVLAHARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLA- 364 (402)
T ss_dssp SCCCHH-HHHTTEEEEEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHH-
T ss_pred cCCCHH-HHHhhCCEEEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHH-
Confidence 999888 9999999999999999999999999999999873455677999999999998876 6899999999999
Q ss_pred CCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhcc
Q 012492 409 TKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQR 444 (462)
Q Consensus 409 ~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~~ 444 (462)
+|++.+++|++.++++....+++++++.+++++.+.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 400 (402)
T 3ia7_A 365 ADSAVRERVRRMQRDILSSGGPARAADEVEAYLGRV 400 (402)
T ss_dssp HCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhc
Confidence 799999999999999999999999999999998654
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.4e-26 Score=226.70 Aligned_cols=346 Identities=15% Similarity=0.109 Sum_probs=190.6
Q ss_pred CCCCCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEec--ccc---ccCCCchhhHH--HHHHHHhhh---HHH
Q 012492 59 AERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDV--CKE---YAGWPLNDMER--SYKFMVKHV---QLW 128 (462)
Q Consensus 59 ~~~~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~--~~~---~~~~~~~~~~~--~y~~~~~~~---~l~ 128 (462)
.+.+|||+|++.+. .||..++.+|+++|+++|| +|.+... +.. ..+.....+.. .+....... ..+
T Consensus 12 ~~~~MrIl~~~~~~-~gh~~~~~~La~~L~~~Gh---eV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 4fzr_A 12 RGSHMRILVIAGCS-EGFVMPLVPLSWALRAAGH---EVLVAASENMGPTVTGAGLPFAPTCPSLDMPEVLSWDREGNRT 87 (398)
T ss_dssp ---CCEEEEECCSS-HHHHGGGHHHHHHHHHTTC---EEEEEEEGGGHHHHHHTTCCEEEEESSCCHHHHHSBCTTSCBC
T ss_pred CCCceEEEEEcCCC-cchHHHHHHHHHHHHHCCC---EEEEEcCHHHHHHHHhCCCeeEecCCccchHhhhhhhccCccc
Confidence 34568999999875 7999999999999999986 4443321 100 01111111000 000000000 000
Q ss_pred HHHhhcCC-cchhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcc
Q 012492 129 KVAFHSTS-PKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPT 207 (462)
Q Consensus 129 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~ 207 (462)
...+.... .......+ .........++.+++++++||+||++...... ..+++. .++|+|.+.++... +..
T Consensus 88 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~--~~~a~~----~giP~v~~~~~~~~-~~~ 159 (398)
T 4fzr_A 88 TMPREEKPLLEHIGRGY-GRLVLRMRDEALALAERWKPDLVLTETYSLTG--PLVAAT----LGIPWIEQSIRLAS-PEL 159 (398)
T ss_dssp CCCSSHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCSEEEEETTCTHH--HHHHHH----HTCCEEEECCSSCC-CHH
T ss_pred ccccchhhHHHHHHHHH-HHHHHHHHHHHHHHHHhCCCCEEEECccccHH--HHHHHh----hCCCEEEeccCCCC-chh
Confidence 00000000 00000111 11122345678889999999999987633322 344444 38999987776531 111
Q ss_pred c-------cc-----------CCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCc
Q 012492 208 W-------FH-----------PRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILP 269 (462)
Q Consensus 208 ~-------~~-----------~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~ 269 (462)
+ +. ...+..+...+........ .....+.+++.. .....+...+..+++.+
T Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~ 228 (398)
T 4fzr_A 160 IKSAGVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQPK--PGTTKMRYVPYN---------GRNDQVPSWVFEERKQP 228 (398)
T ss_dssp HHHHHHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC------CCCEECCCCCCC---------CSSCCCCHHHHSCCSSC
T ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCCC--CCCCCeeeeCCC---------CCCCCCchhhhcCCCCC
Confidence 0 00 0112222222211111000 000001111100 00111111122234567
Q ss_pred EEEEEeCCCCCcc-------HHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHH
Q 012492 270 AVLLMGGGEGMGP-------VKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWM 342 (462)
Q Consensus 270 ~iLv~gG~~~~~~-------~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~ 342 (462)
.|+++.|+....+ ..+.+..+++.+.+ .++++++++|... .+.++ .+..||.+.||+ ++.++|
T Consensus 229 ~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~-----~~~~~v~~~~~~~--~~~l~--~~~~~v~~~~~~-~~~~ll 298 (398)
T 4fzr_A 229 RLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK-----LGFEVVVAVSDKL--AQTLQ--PLPEGVLAAGQF-PLSAIM 298 (398)
T ss_dssp EEECC----------------CCSHHHHHHHGGG-----GTCEEEECCCC------------CCTTEEEESCC-CHHHHG
T ss_pred EEEEEccCcccccccccccchHHHHHHHHHHHHh-----CCCEEEEEeCCcc--hhhhc--cCCCcEEEeCcC-CHHHHH
Confidence 8888888774322 22233444444443 1467777766553 23333 246799999999 589999
Q ss_pred HhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHHHHHHH
Q 012492 343 GACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDELKRMS 418 (462)
Q Consensus 343 ~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~~~~m~ 418 (462)
+.||++|+++|++|++|||++|+|+|++|.. ++|..|++.+.+.|+|+.++ +++.+++++.+++ +|++.+++|+
T Consensus 299 ~~ad~~v~~gG~~t~~Ea~~~G~P~v~~p~~-~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll-~~~~~~~~~~ 376 (398)
T 4fzr_A 299 PACDVVVHHGGHGTTLTCLSEGVPQVSVPVI-AEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIR-DDSSYVGNAR 376 (398)
T ss_dssp GGCSEEEECCCHHHHHHHHHTTCCEEECCCS-GGGHHHHHHHHHTTSEEECC-------CHHHHHHHHH-HCTHHHHHHH
T ss_pred hhCCEEEecCCHHHHHHHHHhCCCEEecCCc-hhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHH-hCHHHHHHHH
Confidence 9999999999999999999999999999874 45667999999999999886 6789999999999 7999999999
Q ss_pred HHHHhhcCCcHHHHHHHHHHH
Q 012492 419 ENALKLAQPEAVVDIVKDIHD 439 (462)
Q Consensus 419 ~~a~~~~~~~~~~~ia~~i~~ 439 (462)
+.++++....+++++++.+++
T Consensus 377 ~~~~~~~~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 377 RLAAEMATLPTPADIVRLIEQ 397 (398)
T ss_dssp HHHHHHTTSCCHHHHHHHHTC
T ss_pred HHHHHHHcCCCHHHHHHHHhc
Confidence 999999999999999998764
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-25 Score=223.33 Aligned_cols=341 Identities=13% Similarity=0.038 Sum_probs=211.6
Q ss_pred CCCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEecccc-----ccCCCchhhHHHHHHHHhhhHHHHHHhhcC
Q 012492 61 RTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKE-----YAGWPLNDMERSYKFMVKHVQLWKVAFHST 135 (462)
Q Consensus 61 ~~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~-----~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~ 135 (462)
.||||+|++.+. .||..++.+|+++|+++|| +|.+...... ..+..+..++. .+...+...
T Consensus 6 ~m~kIl~~~~~~-~Gh~~p~~~la~~L~~~G~---~V~~~~~~~~~~~~~~~g~~~~~~~~----------~~~~~~~~~ 71 (430)
T 2iyf_A 6 TPAHIAMFSIAA-HGHVNPSLEVIRELVARGH---RVTYAIPPVFADKVAATGPRPVLYHS----------TLPGPDADP 71 (430)
T ss_dssp --CEEEEECCSC-HHHHGGGHHHHHHHHHTTC---EEEEEECGGGHHHHHTTSCEEEECCC----------CSCCTTSCG
T ss_pred ccceEEEEeCCC-CccccchHHHHHHHHHCCC---eEEEEeCHHHHHHHHhCCCEEEEcCC----------cCccccccc
Confidence 367999987666 6999999999999999985 4444421100 00000000000 000000000
Q ss_pred C--cchhhHHHHH--HHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCccc---
Q 012492 136 S--PKWIHSCYLA--AMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTW--- 208 (462)
Q Consensus 136 ~--~~~~~~~~~~--~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~--- 208 (462)
. .......... .........+.+++++++||+||+++.... ...+++. .++|+|.+.+... .+..|
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~--~~~~A~~----~giP~v~~~~~~~-~~~~~~~~ 144 (430)
T 2iyf_A 72 EAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYP--ARVLARR----WGVPAVSLSPNLV-AWKGYEEE 144 (430)
T ss_dssp GGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHH--HHHHHHH----HTCCEEEEESSCC-CCTTHHHH
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHH--HHHHHHH----cCCCEEEEecccc-cccccccc
Confidence 0 0000111100 011234567788899999999999875432 2344554 3899998776542 11111
Q ss_pred -------------------------cc------------CCCcEEEEcCHHHHHHHHHcCCCCCc-EEEcCCCCChhhhc
Q 012492 209 -------------------------FH------------PRVNRCYCPSKEVAKRASYFGLEVSQ-IRVFGLPIRPSFVR 250 (462)
Q Consensus 209 -------------------------~~------------~~~d~~i~~s~~~~~~l~~~gi~~~~-i~v~g~pv~~~~~~ 250 (462)
+. ...+.+++.+....+... ..++ .+ +.++|+++......
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~-~~~v~~vG~~~~~~~~~ 222 (430)
T 2iyf_A 145 VAEPMWREPRQTERGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA-DRVD-EDVYTFVGACQGDRAEE 222 (430)
T ss_dssp THHHHHHHHHHSHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG-GGSC-TTTEEECCCCC-----C
T ss_pred cccchhhhhccchHHHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc-ccCC-CccEEEeCCcCCCCCCC
Confidence 00 023445555443322111 1222 23 67777544211000
Q ss_pred ccCChHHHHHHcCC-CCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCe
Q 012492 251 AVISKDNLRLELQM-DPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPV 329 (462)
Q Consensus 251 ~~~~~~~~r~~l~l-~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V 329 (462)
..+.. .++.++++++.|+.+ ....+.+..+++.+.+ .+++++++++|.+.. .+.++ .+..+|
T Consensus 223 ---------~~~~~~~~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~----~~~~~~~~~~G~~~~-~~~l~--~~~~~v 285 (430)
T 2iyf_A 223 ---------GGWQRPAGAEKVVLVSLGSAF-TKQPAFYRECVRAFGN----LPGWHLVLQIGRKVT-PAELG--ELPDNV 285 (430)
T ss_dssp ---------CCCCCCTTCSEEEEEECTTTC-C-CHHHHHHHHHHHTT----CTTEEEEEECC---C-GGGGC--SCCTTE
T ss_pred ---------CCCccccCCCCeEEEEcCCCC-CCcHHHHHHHHHHHhc----CCCeEEEEEeCCCCC-hHHhc--cCCCCe
Confidence 01211 234567888888887 4445666666666643 246778788887642 12232 245789
Q ss_pred EEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHH
Q 012492 330 KVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTE 405 (462)
Q Consensus 330 ~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ 405 (462)
.+.||++++ ++|+.||++|+++|++|++|||++|+|+|++|.. ++|..|++.+.+.|.|+.+. ++++++++|.+
T Consensus 286 ~~~~~~~~~-~~l~~ad~~v~~~G~~t~~Ea~~~G~P~i~~p~~-~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ 363 (430)
T 2iyf_A 286 EVHDWVPQL-AILRQADLFVTHAGAGGSQEGLATATPMIAVPQA-VDQFGNADMLQGLGVARKLATEEATADLLRETALA 363 (430)
T ss_dssp EEESSCCHH-HHHTTCSEEEECCCHHHHHHHHHTTCCEEECCCS-HHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHH
T ss_pred EEEecCCHH-HHhhccCEEEECCCccHHHHHHHhCCCEEECCCc-cchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHH
Confidence 999999888 8999999999999999999999999999999875 45567999999999999886 68999999999
Q ss_pred HhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhcc
Q 012492 406 WFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQR 444 (462)
Q Consensus 406 ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~~ 444 (462)
++ +|++.+++|++.++++...++++++++.|++++++.
T Consensus 364 ll-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 401 (430)
T 2iyf_A 364 LV-DDPEVARRLRRIQAEMAQEGGTRRAADLIEAELPAR 401 (430)
T ss_dssp HH-HCHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC-
T ss_pred HH-cCHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhcc
Confidence 99 799999999999998887889999999999988654
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-24 Score=223.34 Aligned_cols=265 Identities=13% Similarity=0.092 Sum_probs=183.9
Q ss_pred HhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC------------c-c-----------------ccc
Q 012492 161 MEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH------------P-T-----------------WFH 210 (462)
Q Consensus 161 ~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~------------~-~-----------------~~~ 210 (462)
++.+||+||++.......+..+++... .++|+|...|+..... + . +..
T Consensus 127 ~~~~~DiIh~~~~~~~~~~~~~~~~~~--~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 1rzu_A 127 PGWRPDMVHAHDWQAAMTPVYMRYAET--PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGL 204 (485)
T ss_dssp SSCCCSEEEEEHHHHTTHHHHHHHSSS--CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHH
T ss_pred cCCCCCEEEecccchhHHHHHHhhccc--CCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHH
Confidence 578999999987544333333333211 4899999888853100 0 0 012
Q ss_pred CCCcEEEEcCHHHHHHHHH--cC--------CCCCcEEEcCCCCChhhhcccCC------------------hHHHHHHc
Q 012492 211 PRVNRCYCPSKEVAKRASY--FG--------LEVSQIRVFGLPIRPSFVRAVIS------------------KDNLRLEL 262 (462)
Q Consensus 211 ~~~d~~i~~s~~~~~~l~~--~g--------i~~~~i~v~g~pv~~~~~~~~~~------------------~~~~r~~l 262 (462)
+.+|.++++|+..++.+.+ .| ++..++.+++|+++...+.+..+ +..+++++
T Consensus 205 ~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 284 (485)
T 1rzu_A 205 QTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHF 284 (485)
T ss_dssp HHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHH
T ss_pred hhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhc
Confidence 3579999999999888754 23 35688999999998765544222 46788899
Q ss_pred CCCCC-CcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHH----HHHHHhhccCCCCeE-Eeccch
Q 012492 263 QMDPI-LPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRT----LASTLQSEEWKIPVK-VRGFET 336 (462)
Q Consensus 263 ~l~~~-~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~----l~~~~~~~~~~~~V~-~~g~~~ 336 (462)
+++++ .++++++|+....+++..+++++ +.+.+ ++++++++++.... +.+..+++ ..+|. +.|+.+
T Consensus 285 ~~~~~~~~~i~~vGrl~~~Kg~~~li~a~-~~l~~-----~~~~l~ivG~g~~~~~~~l~~~~~~~--~~~v~~~~g~~~ 356 (485)
T 1rzu_A 285 RIDDDGSPLFCVISRLTWQKGIDLMAEAV-DEIVS-----LGGRLVVLGAGDVALEGALLAAASRH--HGRVGVAIGYNE 356 (485)
T ss_dssp TCCCSSSCEEEEESCBSTTTTHHHHHTTH-HHHHH-----TTCEEEEEECBCHHHHHHHHHHHHHT--TTTEEEEESCCH
T ss_pred CCCCCCCeEEEEEccCccccCHHHHHHHH-HHHHh-----cCceEEEEeCCchHHHHHHHHHHHhC--CCcEEEecCCCH
Confidence 99875 56555555444445555555544 45543 36776655433322 33333333 36897 789975
Q ss_pred hH-HHHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHC----------CceeeeC--CHHHH
Q 012492 337 QM-EKWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDN----------GAGVFTR--SPKET 399 (462)
Q Consensus 337 ~~-~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~----------G~g~~~~--~~~~l 399 (462)
+. ..+|+.||++|.+|. |++++|||++|+|+|+++.++ ...+++. +.|++++ |++++
T Consensus 357 ~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg------~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~l 430 (485)
T 1rzu_A 357 PLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGG------LADTVIDANHAALASKAATGVQFSPVTLDGL 430 (485)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHH------HHHHCCBCCHHHHHTTCCCBEEESSCSHHHH
T ss_pred HHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCCCC------hhheecccccccccccCCcceEeCCCCHHHH
Confidence 54 799999999999874 899999999999999998632 2233443 4677765 79999
Q ss_pred HHHHHHHhc--CCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 400 ARIVTEWFS--TKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 400 a~~i~~ll~--~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
+++|.+++. +|++.+++|++++++ +.++|+.+++.++++.++
T Consensus 431 a~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 431 KQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHH
Confidence 999999983 489999999999875 789999999999998864
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-23 Score=217.00 Aligned_cols=271 Identities=13% Similarity=0.078 Sum_probs=188.3
Q ss_pred HHHHHHHH----hhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC--c-----------c---------
Q 012492 154 KEVEAGLM----EYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH--P-----------T--------- 207 (462)
Q Consensus 154 ~~l~~~l~----~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~--~-----------~--------- 207 (462)
+.+.++++ +.+||+||++.......+..++... .++|+|...|+..... + .
T Consensus 115 ~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~---~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (485)
T 2qzs_A 115 WVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARG---RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEF 191 (485)
T ss_dssp HHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHTT---CSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEE
T ss_pred HHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhhcc---CCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccc
Confidence 34445555 3899999998865444333333111 4899999888853100 0 0
Q ss_pred --------cccCCCcEEEEcCHHHHHHHHH--cCCC--------C--CcEEEcCCCCChhhhcccCC-------------
Q 012492 208 --------WFHPRVNRCYCPSKEVAKRASY--FGLE--------V--SQIRVFGLPIRPSFVRAVIS------------- 254 (462)
Q Consensus 208 --------~~~~~~d~~i~~s~~~~~~l~~--~gi~--------~--~~i~v~g~pv~~~~~~~~~~------------- 254 (462)
+..+.+|.++++|+..++.+.+ .|++ + .++.+++|+++...+.+..+
T Consensus 192 ~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~ 271 (485)
T 2qzs_A 192 NGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLE 271 (485)
T ss_dssp TTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGG
T ss_pred cccccHHHHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchh
Confidence 0124579999999999888754 2432 2 68999999998765554221
Q ss_pred -----hHHHHHHcCCCC--CCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHH----HHHHHhhc
Q 012492 255 -----KDNLRLELQMDP--ILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRT----LASTLQSE 323 (462)
Q Consensus 255 -----~~~~r~~l~l~~--~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~----l~~~~~~~ 323 (462)
+..+++++++++ +.++++++|+....++...+++++ +.+.+ ++++++++++.... +.+..+++
T Consensus 272 ~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~-~~l~~-----~~~~l~ivG~g~~~~~~~l~~~~~~~ 345 (485)
T 2qzs_A 272 DKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEAL-PGLLE-----QGGQLALLGAGDPVLQEGFLAAAAEY 345 (485)
T ss_dssp GGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHH-HHHHH-----TTCEEEEEEEECHHHHHHHHHHHHHS
T ss_pred HHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHH-HHHhh-----CCcEEEEEeCCchHHHHHHHHHHHhC
Confidence 467888999976 567676666555556666666555 45543 36776655433322 33333433
Q ss_pred cCCCCeE-Eeccchh-HHHHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHC----------
Q 012492 324 EWKIPVK-VRGFETQ-MEKWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDN---------- 387 (462)
Q Consensus 324 ~~~~~V~-~~g~~~~-~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~---------- 387 (462)
..+|. +.|+.++ +..+|+.||++|.+|. |++++|||++|+|+|+++.+ ....++..
T Consensus 346 --~~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~g------g~~e~v~~~~~~~~~~~~ 417 (485)
T 2qzs_A 346 --PGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTG------GLADTVSDCSLENLADGV 417 (485)
T ss_dssp --TTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSH------HHHHHCCBCCHHHHHTTC
T ss_pred --CCcEEEeCCCCHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEECCCC------CccceeccCccccccccc
Confidence 36886 8899754 4899999999999874 89999999999999999863 22234444
Q ss_pred CceeeeC--CHHHHHHHHHHHhc--CCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 388 GAGVFTR--SPKETARIVTEWFS--TKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 388 G~g~~~~--~~~~la~~i~~ll~--~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
+.|++++ ++++++++|.+++. +|++.+++|++++++ +.++|+.+++.++++.++
T Consensus 418 ~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~ 475 (485)
T 2qzs_A 418 ASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYR 475 (485)
T ss_dssp CCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHH
T ss_pred cceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHH
Confidence 4677765 79999999999983 489999999999875 789999999999998864
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=218.00 Aligned_cols=347 Identities=14% Similarity=0.116 Sum_probs=204.0
Q ss_pred CCCCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEecccc-----ccCCCchh------hHHHHHHHHhhhHHH
Q 012492 60 ERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKE-----YAGWPLND------MERSYKFMVKHVQLW 128 (462)
Q Consensus 60 ~~~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~-----~~~~~~~~------~~~~y~~~~~~~~l~ 128 (462)
+++|||+|++.+. .||..++.+|+++|+++|| +|.+... .. ..+..... ....+.......+.+
T Consensus 18 ~~~MrIl~~~~~~-~Ghv~~~~~La~~L~~~Gh---eV~v~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
T 3oti_A 18 GRHMRVLFVSSPG-IGHLFPLIQLAWGFRTAGH---DVLIAVA-EHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRF 92 (398)
T ss_dssp -CCCEEEEECCSS-HHHHGGGHHHHHHHHHTTC---EEEEEES-SCHHHHHTTTCEEEESSTTCCHHHHHHHHHHHCHHH
T ss_pred hhcCEEEEEcCCC-cchHhHHHHHHHHHHHCCC---EEEEecc-chHHHHHhCCCeeEecCCccCHHHHhhhcccCCccc
Confidence 4668999999875 7999999999999999986 4444432 11 01111110 011111000000000
Q ss_pred HHHh--hcC-CcchhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC
Q 012492 129 KVAF--HST-SPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH 205 (462)
Q Consensus 129 ~~~~--~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~ 205 (462)
.... ... ........+.. ........+.+++++++||+||++...... ..+++. .++|+|.+.+++....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~pDlVv~d~~~~~~--~~aA~~----~giP~v~~~~~~~~~~ 165 (398)
T 3oti_A 93 AETVATRPAIDLEEWGVQIAA-VNRPLVDGTMALVDDYRPDLVVYEQGATVG--LLAADR----AGVPAVQRNQSAWRTR 165 (398)
T ss_dssp HHTGGGSCCCSGGGGHHHHHH-HHGGGHHHHHHHHHHHCCSEEEEETTCHHH--HHHHHH----HTCCEEEECCTTCCCT
T ss_pred cccccCChhhhHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCEEEECchhhHH--HHHHHH----cCCCEEEEeccCCCcc
Confidence 0000 000 00111111111 122345678889999999999987444332 244454 3899998776643110
Q ss_pred c------cccc----------CCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCc
Q 012492 206 P------TWFH----------PRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILP 269 (462)
Q Consensus 206 ~------~~~~----------~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~ 269 (462)
. .|+. ...+..+...+....... ......+.+++. + .+......+..+++.+
T Consensus 166 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~ 233 (398)
T 3oti_A 166 GMHRSIASFLTDLMDKHQVSLPEPVATIESFPPSLLLEA--EPEGWFMRWVPY---------G-GGAVLGDRLPPVPARP 233 (398)
T ss_dssp THHHHHHTTCHHHHHHTTCCCCCCSEEECSSCGGGGTTS--CCCSBCCCCCCC---------C-CCEECCSSCCCCCSSC
T ss_pred chhhHHHHHHHHHHHHcCCCCCCCCeEEEeCCHHHCCCC--CCCCCCccccCC---------C-CCcCCchhhhcCCCCC
Confidence 0 0100 001222222221110000 000000111100 0 0001111122245677
Q ss_pred EEEEEeCCCCCc-cHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHHHhcchh
Q 012492 270 AVLLMGGGEGMG-PVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCI 348 (462)
Q Consensus 270 ~iLv~gG~~~~~-~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~v 348 (462)
+|++++|+.... +..+.+..+++.+.+ .++++++++|... .+.++ ....||.+.||+ ++.++|+.||++
T Consensus 234 ~v~v~~G~~~~~~~~~~~~~~~~~~l~~-----~~~~~v~~~g~~~--~~~l~--~~~~~v~~~~~~-~~~~ll~~ad~~ 303 (398)
T 3oti_A 234 EVAITMGTIELQAFGIGAVEPIIAAAGE-----VDADFVLALGDLD--ISPLG--TLPRNVRAVGWT-PLHTLLRTCTAV 303 (398)
T ss_dssp EEEECCTTTHHHHHCGGGHHHHHHHHHT-----SSSEEEEECTTSC--CGGGC--SCCTTEEEESSC-CHHHHHTTCSEE
T ss_pred EEEEEcCCCccccCcHHHHHHHHHHHHc-----CCCEEEEEECCcC--hhhhc--cCCCcEEEEccC-CHHHHHhhCCEE
Confidence 899988887432 122233344444443 2568888887653 12232 346799999999 799999999999
Q ss_pred eecCChhhHHHHHHhCCCEEEecCCCCccccch--HHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcC
Q 012492 349 ITKAGPGTIAEALIRGLPIILNDYIPGQEKGNV--PYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQ 426 (462)
Q Consensus 349 V~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~--~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~ 426 (462)
|+++|++|++||+++|+|+|+.|... +|..|+ +.+.+.|+|+.++..+...+.+.+++ +|++.+++|++.++++..
T Consensus 304 v~~~G~~t~~Eal~~G~P~v~~p~~~-dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~~ll-~~~~~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 304 VHHGGGGTVMTAIDAGIPQLLAPDPR-DQFQHTAREAVSRRGIGLVSTSDKVDADLLRRLI-GDESLRTAAREVREEMVA 381 (398)
T ss_dssp EECCCHHHHHHHHHHTCCEEECCCTT-CCSSCTTHHHHHHHTSEEECCGGGCCHHHHHHHH-HCHHHHHHHHHHHHHHHT
T ss_pred EECCCHHHHHHHHHhCCCEEEcCCCc-hhHHHHHHHHHHHCCCEEeeCCCCCCHHHHHHHH-cCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998744 456799 99999999999875544556666889 799999999999999999
Q ss_pred CcHHHHHHHHHHHHHh
Q 012492 427 PEAVVDIVKDIHDLAA 442 (462)
Q Consensus 427 ~~~~~~ia~~i~~l~~ 442 (462)
..+++++++.|++++.
T Consensus 382 ~~~~~~~~~~l~~l~~ 397 (398)
T 3oti_A 382 LPTPAETVRRIVERIS 397 (398)
T ss_dssp SCCHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHhc
Confidence 9999999999998864
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=217.10 Aligned_cols=351 Identities=11% Similarity=0.047 Sum_probs=204.7
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEecccc-----ccCCCchhh-HHH--HHHHHhh-hHHHHHHhh
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKE-----YAGWPLNDM-ERS--YKFMVKH-VQLWKVAFH 133 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~-----~~~~~~~~~-~~~--y~~~~~~-~~l~~~~~~ 133 (462)
|||+|++.+. .||..++..|+++|+++|| +|.+...... ..+.....+ ... +...... .+.......
T Consensus 2 MrIl~~~~~~-~gh~~~~~~la~~L~~~Gh---eV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (391)
T 3tsa_A 2 MRVLVVPLPY-PTHLMAMVPLCWALQASGH---EVLIAAPPELQATAHGAGLTTAGIRGNDRTGDTGGTTQLRFPNPAFG 77 (391)
T ss_dssp CEEEEECCSC-HHHHHTTHHHHHHHHHTTC---EEEEEECHHHHHHHHHBTCEEEEC--------------CCSCCGGGG
T ss_pred cEEEEEcCCC-cchhhhHHHHHHHHHHCCC---EEEEecChhhHHHHHhCCCceeeecCCccchhhhhhhcccccccccc
Confidence 7999999885 7999999999999999986 4443321000 011111110 000 0000000 000000000
Q ss_pred cCCcchhhHHHHHHHHHHH-------HHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCc
Q 012492 134 STSPKWIHSCYLAAMAAYY-------AKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHP 206 (462)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~-------~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~ 206 (462)
..........+.. ..... ...+.+++++++||+||+++..... ..+++. .++|+|.+.++......
T Consensus 78 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~--~~aa~~----~giP~v~~~~~~~~~~~ 150 (391)
T 3tsa_A 78 QRDTEAGRQLWEQ-TASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIG--RVLGGL----LDLPVVLHRWGVDPTAG 150 (391)
T ss_dssp CTTSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHH--HHHHHH----TTCCEEEECCSCCCTTT
T ss_pred cccchhHHHHHHH-HHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHH--HHHHHH----hCCCEEEEecCCccccc
Confidence 0000011111111 11233 6678899999999999998633322 344554 48999988776532111
Q ss_pred ccccCCCcEEEEcCHHHHHHHHHcCCCCC---c--EEEcCCCCCh---------hhhcccCChHHHHHHcCCCCCCcEEE
Q 012492 207 TWFHPRVNRCYCPSKEVAKRASYFGLEVS---Q--IRVFGLPIRP---------SFVRAVISKDNLRLELQMDPILPAVL 272 (462)
Q Consensus 207 ~~~~~~~d~~i~~s~~~~~~l~~~gi~~~---~--i~v~g~pv~~---------~~~~~~~~~~~~r~~l~l~~~~~~iL 272 (462)
.+ .. .........+.+++++.. . +..++..+.. .|... .........+..+++.+.|+
T Consensus 151 ~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~vl 222 (391)
T 3tsa_A 151 PF-SD------RAHELLDPVCRHHGLTGLPTPELILDPCPPSLQASDAPQGAPVQYVPY-NGSGAFPAWGAARTSARRVC 222 (391)
T ss_dssp HH-HH------HHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCTTSCCCEECCCCCC-CCCEECCGGGSSCCSSEEEE
T ss_pred cc-cc------hHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCCCCCccCCeeeecC-CCCcCCCchhhcCCCCCEEE
Confidence 00 00 000011111122232210 1 1111111000 00000 00001111222335667889
Q ss_pred EEeCCCCC-ccH-HHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHHHhcchhee
Q 012492 273 LMGGGEGM-GPV-KETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIIT 350 (462)
Q Consensus 273 v~gG~~~~-~~~-~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~ 350 (462)
+++|+... ++. .+++..+++. .+ .|++++++++|... .+.++ +...|+++.||.+ +.++|+.||++|+
T Consensus 223 v~~G~~~~~~~~~~~~~~~~~~~-~~----~p~~~~v~~~~~~~--~~~l~--~~~~~v~~~~~~~-~~~ll~~ad~~v~ 292 (391)
T 3tsa_A 223 ICMGRMVLNATGPAPLLRAVAAA-TE----LPGVEAVIAVPPEH--RALLT--DLPDNARIAESVP-LNLFLRTCELVIC 292 (391)
T ss_dssp EECCHHHHHHHCSHHHHHHHHHH-HT----STTEEEEEECCGGG--GGGCT--TCCTTEEECCSCC-GGGTGGGCSEEEE
T ss_pred EEcCCCCCcccchHHHHHHHHHh-cc----CCCeEEEEEECCcc--hhhcc--cCCCCEEEeccCC-HHHHHhhCCEEEe
Confidence 98888753 233 5556666554 32 46788887777653 22222 3467999999985 5678899999999
Q ss_pred cCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeCC------HHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 012492 351 KAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRS------PKETARIVTEWFSTKTDELKRMSENALKL 424 (462)
Q Consensus 351 ~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~------~~~la~~i~~ll~~d~~~~~~m~~~a~~~ 424 (462)
++|++|++||+++|+|+|+.|... +|..|+..+.+.|+|..+.. ++.+++++.+++ +|++.+++|++.++++
T Consensus 293 ~~G~~t~~Ea~~~G~P~v~~p~~~-~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll-~~~~~~~~~~~~~~~~ 370 (391)
T 3tsa_A 293 AGGSGTAFTATRLGIPQLVLPQYF-DQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVL-GDTGFAAAAIKLSDEI 370 (391)
T ss_dssp CCCHHHHHHHHHTTCCEEECCCST-THHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHH-TCTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCCEEecCCcc-cHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHH-cCHHHHHHHHHHHHHH
Confidence 999999999999999999998744 45679999999999998865 889999999999 7999999999999999
Q ss_pred cCCcHHHHHHHHHHHHHhcc
Q 012492 425 AQPEAVVDIVKDIHDLAAQR 444 (462)
Q Consensus 425 ~~~~~~~~ia~~i~~l~~~~ 444 (462)
....+++++++.|++++.++
T Consensus 371 ~~~~~~~~~~~~i~~~~~~~ 390 (391)
T 3tsa_A 371 TAMPHPAALVRTLENTAAIR 390 (391)
T ss_dssp HTSCCHHHHHHHHHHC----
T ss_pred HcCCCHHHHHHHHHHHHhcc
Confidence 99999999999999887653
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-22 Score=206.04 Aligned_cols=166 Identities=16% Similarity=0.159 Sum_probs=135.4
Q ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHHHhc
Q 012492 266 PILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGAC 345 (462)
Q Consensus 266 ~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~a 345 (462)
+++++|++++|+.+. ...+.+..+++.+.+ .++++++++|.+... +.++ .+..++.+.+|++++ ++|+.|
T Consensus 253 ~~~~~v~v~~Gs~~~-~~~~~~~~~~~al~~-----~~~~~~~~~g~~~~~-~~~~--~~~~~v~~~~~~~~~-~~l~~~ 322 (424)
T 2iya_A 253 DGRPVLLIALGSAFT-DHLDFYRTCLSAVDG-----LDWHVVLSVGRFVDP-ADLG--EVPPNVEVHQWVPQL-DILTKA 322 (424)
T ss_dssp SSCCEEEEECCSSSC-CCHHHHHHHHHHHTT-----CSSEEEEECCTTSCG-GGGC--SCCTTEEEESSCCHH-HHHTTC
T ss_pred CCCCEEEEEcCCCCc-chHHHHHHHHHHHhc-----CCcEEEEEECCcCCh-HHhc--cCCCCeEEecCCCHH-HHHhhC
Confidence 356788999888873 334555566666643 457888888875321 1222 245789999999887 899999
Q ss_pred chheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 012492 346 DCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDELKRMSENA 421 (462)
Q Consensus 346 D~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~~~~m~~~a 421 (462)
|++|+++|++|++||+++|+|+|+.|...+ |..|++.+++.|+|+.+. ++++++++|.+++ +|++.++++++.+
T Consensus 323 d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~d-Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll-~~~~~~~~~~~~~ 400 (424)
T 2iya_A 323 SAFITHAGMGSTMEALSNAVPMVAVPQIAE-QTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVA-SDPGVAERLAAVR 400 (424)
T ss_dssp SEEEECCCHHHHHHHHHTTCCEEECCCSHH-HHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHH-HCHHHHHHHHHHH
T ss_pred CEEEECCchhHHHHHHHcCCCEEEecCccc-hHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHH-cCHHHHHHHHHHH
Confidence 999999999999999999999999998644 567999999999998886 7899999999999 7999999999999
Q ss_pred HhhcCCcHHHHHHHHHHHHHhc
Q 012492 422 LKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 422 ~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
++.....+.+++++.|++++.+
T Consensus 401 ~~~~~~~~~~~~~~~i~~~~~~ 422 (424)
T 2iya_A 401 QEIREAGGARAAADILEGILAE 422 (424)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCcHHHHHHHHHHHHhc
Confidence 8888889999999999998764
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-22 Score=202.46 Aligned_cols=165 Identities=19% Similarity=0.192 Sum_probs=129.0
Q ss_pred CCCcEEEEEeCCCCCc---c-HHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHH
Q 012492 266 PILPAVLLMGGGEGMG---P-VKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKW 341 (462)
Q Consensus 266 ~~~~~iLv~gG~~~~~---~-~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l 341 (462)
++++++++++|+.+.. + ..+.+..+++.+.+ .++++++++|.+. .+.++. ...+|.+ ||.+ +.++
T Consensus 208 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~-----~~~~~~~~~g~~~--~~~l~~--~~~~v~~-~~~~-~~~~ 276 (384)
T 2p6p_A 208 DTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVR-----WDVELIVAAPDTV--AEALRA--EVPQARV-GWTP-LDVV 276 (384)
T ss_dssp CSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHT-----TTCEEEEECCHHH--HHHHHH--HCTTSEE-ECCC-HHHH
T ss_pred CCCCEEEEECCCCCccccccccHHHHHHHHHHHhc-----CCcEEEEEeCCCC--HHhhCC--CCCceEE-cCCC-HHHH
Confidence 3457788988887753 1 11222233333332 2467887777532 233332 3568999 9995 6899
Q ss_pred HHhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHHHHHH
Q 012492 342 MGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDELKRM 417 (462)
Q Consensus 342 ~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~~~~m 417 (462)
|+.||++|+++|++|++||+++|+|+|++|... .|..|++.+.+.|+|+.++ ++++++++|.+++ +|++.+++|
T Consensus 277 l~~~d~~v~~~G~~t~~Ea~~~G~P~v~~p~~~-dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll-~~~~~~~~~ 354 (384)
T 2p6p_A 277 APTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGS-VLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQ-AKDTYARRA 354 (384)
T ss_dssp GGGCSEEEECSCTTHHHHHHHTTCCEEECCCSH-HHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHH-HCHHHHHHH
T ss_pred HhhCCEEEeCCcHHHHHHHHHhCCCEEEccCcc-cchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHH-cCHHHHHHH
Confidence 999999999999999999999999999999744 4467999999999998876 6889999999999 799999999
Q ss_pred HHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 418 SENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 418 ~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
++.++++....+.+++++.|+++++.
T Consensus 355 ~~~~~~~~~~~~~~~~~~~i~~~~~~ 380 (384)
T 2p6p_A 355 QDLSREISGMPLPATVVTALEQLAHH 380 (384)
T ss_dssp HHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHhhh
Confidence 99999999999999999999999864
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.91 E-value=7e-24 Score=211.13 Aligned_cols=273 Identities=15% Similarity=0.098 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC---c-----ccccCCCcEEEEcCHH
Q 012492 151 YYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH---P-----TWFHPRVNRCYCPSKE 222 (462)
Q Consensus 151 ~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~---~-----~~~~~~~d~~i~~s~~ 222 (462)
....++.+++++++||+|++++......+..+++. .+||++.+........ + .+..+.+|.++++++.
T Consensus 81 ~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~----~~IPv~h~eaglrs~~~~~pee~nR~~~~~~a~~~~~~te~ 156 (385)
T 4hwg_A 81 LVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKR----RKIPIFHMEAGNRCFDQRVPEEINRKIIDHISDVNITLTEH 156 (385)
T ss_dssp HHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHH----TTCCEEEESCCCCCSCTTSTHHHHHHHHHHHCSEEEESSHH
T ss_pred HHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHH----hCCCEEEEeCCCccccccCcHHHHHHHHHhhhceeecCCHH
Confidence 34567888999999999999886544433445554 4899876655432111 1 1223567899999999
Q ss_pred HHHHHHHcCCCCCcEEEcCCCCChhhhcc--cCChHHHHHHcCCCCCCcEEEEEeCCCCC----ccHHHHHHHHHHhhhc
Q 012492 223 VAKRASYFGLEVSQIRVFGLPIRPSFVRA--VISKDNLRLELQMDPILPAVLLMGGGEGM----GPVKETAMALGESLLD 296 (462)
Q Consensus 223 ~~~~l~~~gi~~~~i~v~g~pv~~~~~~~--~~~~~~~r~~l~l~~~~~~iLv~gG~~~~----~~~~~~l~~l~~~l~~ 296 (462)
.++.+.+.|+++++|.++|||+.+.+... ..+++++++++|+++ ++++|+++++... +.+..++.++ +.+.+
T Consensus 157 ~~~~l~~~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al-~~l~~ 234 (385)
T 4hwg_A 157 ARRYLIAEGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSL-QMLIK 234 (385)
T ss_dssp HHHHHHHTTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHcCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHH-HHHHh
Confidence 99999999999999999999976654321 123456788899976 5678888876432 2234444444 34432
Q ss_pred ccCCCCCceEEEEccCCHHHHHHHhhc-c-C--CCCeEEeccc--hhHHHHHHhcchheecCChhhHHHHHHhCCCEEEe
Q 012492 297 KETGRPIGQLIIICGRNRTLASTLQSE-E-W--KIPVKVRGFE--TQMEKWMGACDCIITKAGPGTIAEALIRGLPIILN 370 (462)
Q Consensus 297 ~~~~~~~~~~lvv~G~~~~l~~~~~~~-~-~--~~~V~~~g~~--~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~ 370 (462)
. + ++++++..+ +.+++.++++ + . ..+|.+.+.. .++..+|+.||++|++||+ +..||+++|+|+|+.
T Consensus 235 ~---~-~~~vv~p~~--p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~SGg-v~~EA~alG~Pvv~~ 307 (385)
T 4hwg_A 235 E---Y-NFLIIFSTH--PRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDSGT-ITEEASILNLPALNI 307 (385)
T ss_dssp H---H-CCEEEEEEC--HHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECCTT-HHHHHHHTTCCEEEC
T ss_pred c---C-CeEEEEECC--hHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECCcc-HHHHHHHcCCCEEEc
Confidence 1 1 456665555 3466666665 3 2 3689887654 3789999999999999987 469999999999998
Q ss_pred cCCCCccccchHHHHHCCceeeeC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHhh-cCCcHHHHHHHHHHHHHh
Q 012492 371 DYIPGQEKGNVPYVVDNGAGVFTR-SPKETARIVTEWFSTKTDELKRMSENALKL-AQPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 371 ~~~~~~~~~n~~~l~~~G~g~~~~-~~~~la~~i~~ll~~d~~~~~~m~~~a~~~-~~~~~~~~ia~~i~~l~~ 442 (462)
+...+.++ .++.|.++.+. +++++.+++.+++ +|++.+++|++++..+ .+..++++|++.|.+++.
T Consensus 308 ~~~ter~e-----~v~~G~~~lv~~d~~~i~~ai~~ll-~d~~~~~~m~~~~~~~~g~g~aa~rI~~~l~~~~~ 375 (385)
T 4hwg_A 308 REAHERPE-----GMDAGTLIMSGFKAERVLQAVKTIT-EEHDNNKRTQGLVPDYNEAGLVSKKILRIVLSYVD 375 (385)
T ss_dssp SSSCSCTH-----HHHHTCCEECCSSHHHHHHHHHHHH-TTCBTTBCCSCCCHHHHTCCCHHHHHHHHHHHHHH
T ss_pred CCCccchh-----hhhcCceEEcCCCHHHHHHHHHHHH-hChHHHHHhhccCCCCCCCChHHHHHHHHHHHHhh
Confidence 76443222 46678888885 8999999999999 7888888888878889 999999999999998764
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-22 Score=203.34 Aligned_cols=168 Identities=15% Similarity=0.122 Sum_probs=128.8
Q ss_pred cCCCCCCcEEEEEeCCCCCc-cHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHH
Q 012492 262 LQMDPILPAVLLMGGGEGMG-PVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEK 340 (462)
Q Consensus 262 l~l~~~~~~iLv~gG~~~~~-~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~ 340 (462)
+...+++++|++++|+.+.. ...+.+..+++.+.+ .+.++++..|.... .. ...+.+|+.+.+|.+ +.+
T Consensus 231 l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~-----~~~~~v~~~~~~~~--~~--~~~~~~~v~~~~~~p-~~~ 300 (400)
T 4amg_A 231 LPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVAD-----VDAEFVLTLGGGDL--AL--LGELPANVRVVEWIP-LGA 300 (400)
T ss_dssp CSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGG-----SSSEEEEECCTTCC--CC--CCCCCTTEEEECCCC-HHH
T ss_pred ccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhc-----cCceEEEEecCccc--cc--cccCCCCEEEEeecC-HHH
Confidence 33455678899988887642 222334444455543 34567776665431 11 113567999999995 678
Q ss_pred HHHhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 012492 341 WMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSEN 420 (462)
Q Consensus 341 l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~ 420 (462)
+|..||+||+++|.+|++||+++|+|+|+.|...+ |..|++.+++.|+|+.+++.+.++++|.++| +|++.|+++++.
T Consensus 301 lL~~~~~~v~h~G~~s~~Eal~~GvP~v~~P~~~d-Q~~na~~v~~~G~g~~l~~~~~~~~al~~lL-~d~~~r~~a~~l 378 (400)
T 4amg_A 301 LLETCDAIIHHGGSGTLLTALAAGVPQCVIPHGSY-QDTNRDVLTGLGIGFDAEAGSLGAEQCRRLL-DDAGLREAALRV 378 (400)
T ss_dssp HHTTCSEEEECCCHHHHHHHHHHTCCEEECCC----CHHHHHHHHHHTSEEECCTTTCSHHHHHHHH-HCHHHHHHHHHH
T ss_pred HhhhhhheeccCCccHHHHHHHhCCCEEEecCccc-HHHHHHHHHHCCCEEEcCCCCchHHHHHHHH-cCHHHHHHHHHH
Confidence 99999999999999999999999999999998554 5669999999999999998888899999999 799999999998
Q ss_pred HHhhcCCcHHHHHHHHHHHHH
Q 012492 421 ALKLAQPEAVVDIVKDIHDLA 441 (462)
Q Consensus 421 a~~~~~~~~~~~ia~~i~~l~ 441 (462)
++++....+..++++.|++++
T Consensus 379 ~~~~~~~~~~~~~a~~le~lA 399 (400)
T 4amg_A 379 RQEMSEMPPPAETAAXLVALA 399 (400)
T ss_dssp HHHHHTSCCHHHHHHHHHHHC
T ss_pred HHHHHcCCCHHHHHHHHHHhh
Confidence 888888888999999999874
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=9.9e-24 Score=226.42 Aligned_cols=267 Identities=11% Similarity=0.105 Sum_probs=182.4
Q ss_pred hCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCC---Cc--c------------------cccCCCcEEEEc
Q 012492 163 YKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTC---HP--T------------------WFHPRVNRCYCP 219 (462)
Q Consensus 163 ~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~---~~--~------------------~~~~~~d~~i~~ 219 (462)
.+|||||++.......+..+++. .++|+|...|+.... .. . +..+.+|.+++.
T Consensus 406 ~~PDVIHsH~~~sglva~llar~----~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~ 481 (816)
T 3s28_A 406 GKPDLIIGNYSDGNLVASLLAHK----LGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITS 481 (816)
T ss_dssp SCCSEEEEEHHHHHHHHHHHHHH----HTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEES
T ss_pred CCCeEEEeCCchHHHHHHHHHHH----cCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEEC
Confidence 37999999765444333344444 389999888765310 00 0 134568999999
Q ss_pred CHHHHHHHHH----c------------------CCCCCcEEEcCCCCChhhhcccCChH------------------HHH
Q 012492 220 SKEVAKRASY----F------------------GLEVSQIRVFGLPIRPSFVRAVISKD------------------NLR 259 (462)
Q Consensus 220 s~~~~~~l~~----~------------------gi~~~~i~v~g~pv~~~~~~~~~~~~------------------~~r 259 (462)
|+..++.+.+ + +....++.+++|+++...+.+..... ..+
T Consensus 482 S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r 561 (816)
T 3s28_A 482 TFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENK 561 (816)
T ss_dssp CHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBT
T ss_pred CHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHH
Confidence 9988764211 0 11223899999999987655422111 123
Q ss_pred HHcCC--CCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCC-------------HHHHHHHhhcc
Q 012492 260 LELQM--DPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRN-------------RTLASTLQSEE 324 (462)
Q Consensus 260 ~~l~l--~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~-------------~~l~~~~~~~~ 324 (462)
+.+|+ +++.++|+++|+....|++..+++++ ..+.+. .++++++++++.. .++.+.+++++
T Consensus 562 ~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~-~~L~~~---~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lg 637 (816)
T 3s28_A 562 EHLCVLKDKKKPILFTMARLDRVKNLSGLVEWY-GKNTRL---RELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYK 637 (816)
T ss_dssp TEESCBSCTTSCEEEEECCCCTTTTHHHHHHHH-HHCHHH---HHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTT
T ss_pred HHhcccCCCCCeEEEEEccCcccCCHHHHHHHH-HHHHhh---CCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcC
Confidence 44566 56677777776655556666666655 445432 3567776665444 12456667778
Q ss_pred CCCCeEEeccc------hhHHHHHH-hcchheecC----ChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeee
Q 012492 325 WKIPVKVRGFE------TQMEKWMG-ACDCIITKA----GPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFT 393 (462)
Q Consensus 325 ~~~~V~~~g~~------~~~~~l~~-~aD~vV~~s----g~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~ 393 (462)
+.++|.|.|++ +++..+|+ +||++|.+| .|.+++|||+||+|+|+++.++. .+.+.+.+.|+++
T Consensus 638 L~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~-----~EiV~dg~~Gllv 712 (816)
T 3s28_A 638 LNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP-----AEIIVHGKSGFHI 712 (816)
T ss_dssp CBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTH-----HHHCCBTTTBEEE
T ss_pred CCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCCh-----HHHHccCCcEEEe
Confidence 88999999964 46778888 689999887 38999999999999999986432 2223334467777
Q ss_pred C--CHHHHHHHHHHHhc---CCHHHHHHHHHHHHhhc-CCcHHHHHHHHHHHHHh
Q 012492 394 R--SPKETARIVTEWFS---TKTDELKRMSENALKLA-QPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 394 ~--~~~~la~~i~~ll~---~d~~~~~~m~~~a~~~~-~~~~~~~ia~~i~~l~~ 442 (462)
+ |+++++++|.+++. .|++.+++|++++++.+ +.++|+.+++.+.++.+
T Consensus 713 ~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 713 DPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 5 78999999965541 58999999999999988 78999999999998765
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=198.70 Aligned_cols=295 Identities=14% Similarity=0.082 Sum_probs=195.4
Q ss_pred CCCeEEEEecC---------------CCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhh
Q 012492 61 RTKNVLILMSD---------------TGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHV 125 (462)
Q Consensus 61 ~~~kIli~~~~---------------~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~ 125 (462)
+||||++++.. .++|....+..++++|.++|+ +|.+...... ...... .
T Consensus 2 ~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~---~v~v~~~~~~--~~~~~~-----------~ 65 (342)
T 2iuy_A 2 RPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGH---EVFLLGAPGS--PAGRPG-----------L 65 (342)
T ss_dssp -CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTC---EEEEESCTTS--CCCSTT-----------E
T ss_pred CccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCC---eEEEEecCCC--CCCCCc-----------c
Confidence 36899999876 346999999999999999875 5555432111 100000 0
Q ss_pred HHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC
Q 012492 126 QLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH 205 (462)
Q Consensus 126 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~ 205 (462)
..+ .. .. ...+.+++++.+||+|+++++..... +++ ..++| |...|+... .
T Consensus 66 ~~~-----~~--~~-------------~~~l~~~l~~~~~Dvi~~~~~~~~~~---~~~----~~~~p-v~~~h~~~~-~ 116 (342)
T 2iuy_A 66 TVV-----PA--GE-------------PEEIERWLRTADVDVVHDHSGGVIGP---AGL----PPGTA-FISSHHFTT-R 116 (342)
T ss_dssp EEC-----SC--CS-------------HHHHHHHHHHCCCSEEEECSSSSSCS---TTC----CTTCE-EEEEECSSS-B
T ss_pred eec-----cC--Cc-------------HHHHHHHHHhcCCCEEEECCchhhHH---HHh----hcCCC-EEEecCCCC-C
Confidence 000 00 00 01456778899999999998764432 222 14889 888887642 2
Q ss_pred cccccCCCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHH
Q 012492 206 PTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKE 285 (462)
Q Consensus 206 ~~~~~~~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~ 285 (462)
...+|.++++|+..++.+.+ ..++.+++|+++...+.+.. . .. ++.++++++|+....++...
T Consensus 117 ----~~~~d~ii~~S~~~~~~~~~----~~~~~vi~ngvd~~~~~~~~-~-------~~-~~~~~i~~vG~~~~~Kg~~~ 179 (342)
T 2iuy_A 117 ----PVNPVGCTYSSRAQRAHCGG----GDDAPVIPIPVDPARYRSAA-D-------QV-AKEDFLLFMGRVSPHKGALE 179 (342)
T ss_dssp ----CSCCTTEEESCHHHHHHTTC----CTTSCBCCCCBCGGGSCCST-T-------CC-CCCSCEEEESCCCGGGTHHH
T ss_pred ----cccceEEEEcCHHHHHHHhc----CCceEEEcCCCChhhcCccc-c-------cC-CCCCEEEEEeccccccCHHH
Confidence 12389999999999887754 56789999999877654311 1 12 24455666655444455555
Q ss_pred HHHHHHHhhhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccch--hHHHHHHhcchheecCC-------
Q 012492 286 TAMALGESLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFET--QMEKWMGACDCIITKAG------- 353 (462)
Q Consensus 286 ~l~~l~~~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~~--~~~~l~~~aD~vV~~sg------- 353 (462)
+++++ +.+ ++++++ +|.+. .+.+..++++ ++|+|.|+++ ++.++|+.||++|.+|.
T Consensus 180 li~a~-~~~--------~~~l~i-~G~g~~~~~l~~~~~~~~--~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~ 247 (342)
T 2iuy_A 180 AAAFA-HAC--------GRRLVL-AGPAWEPEYFDEITRRYG--STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWG 247 (342)
T ss_dssp HHHHH-HHH--------TCCEEE-ESCCCCHHHHHHHHHHHT--TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTC
T ss_pred HHHHH-Hhc--------CcEEEE-EeCcccHHHHHHHHHHhC--CCEEEeccCCHHHHHHHHHhCCEEEECCcccccccc
Confidence 55544 443 355554 45543 2444444444 7999999995 56999999999997654
Q ss_pred -------hhhHHHHHHhCCCEEEecCCCCccccchHHHHH--CCceeeeC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 012492 354 -------PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVD--NGAGVFTR-SPKETARIVTEWFSTKTDELKRMSENALK 423 (462)
Q Consensus 354 -------~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~--~G~g~~~~-~~~~la~~i~~ll~~d~~~~~~m~~~a~~ 423 (462)
|++++|||++|+|+|+++.++ ..+.+.+ .+.|++++ ++++++++|.+++ + ++++++
T Consensus 248 ~~~~E~~~~~~~EAma~G~PvI~s~~~~-----~~e~~~~~~~~~g~~~~~d~~~l~~~i~~l~-~--------~~~~~~ 313 (342)
T 2iuy_A 248 GIWCEPGATVVSEAAVSGTPVVGTGNGC-----LAEIVPSVGEVVGYGTDFAPDEARRTLAGLP-A--------SDEVRR 313 (342)
T ss_dssp SCCCCCCCHHHHHHHHTTCCEEECCTTT-----HHHHGGGGEEECCSSSCCCHHHHHHHHHTSC-C--------HHHHHH
T ss_pred cccccCccHHHHHHHhcCCCEEEcCCCC-----hHHHhcccCCCceEEcCCCHHHHHHHHHHHH-H--------HHHHHH
Confidence 789999999999999998642 2233333 34677776 8999999999998 4 445555
Q ss_pred hc-CCcHHHHHHHHHHHHHhc
Q 012492 424 LA-QPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 424 ~~-~~~~~~~ia~~i~~l~~~ 443 (462)
.+ +.++++++++.+.+++++
T Consensus 314 ~~~~~~s~~~~~~~~~~~~~~ 334 (342)
T 2iuy_A 314 AAVRLWGHVTIAERYVEQYRR 334 (342)
T ss_dssp HHHHHHBHHHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHH
Confidence 55 567888888888887764
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-22 Score=204.67 Aligned_cols=171 Identities=18% Similarity=0.183 Sum_probs=128.2
Q ss_pred cCCCCCCcEEEEEeCCCCCc--cHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHH
Q 012492 262 LQMDPILPAVLLMGGGEGMG--PVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQME 339 (462)
Q Consensus 262 l~l~~~~~~iLv~gG~~~~~--~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~ 339 (462)
+...+++++|++++|+.+.. ...+.+..+++.+.+ .++++++++|... . +.++ ....||.+.+|+++ .
T Consensus 261 l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~-----~~~~~v~~~g~~~-~-~~l~--~~~~~v~~~~~~~~-~ 330 (441)
T 2yjn_A 261 LHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGD-----VDAEIIATFDAQQ-L-EGVA--NIPDNVRTVGFVPM-H 330 (441)
T ss_dssp GSSCCSSCEEEEEC----------CCSTTTTHHHHHT-----SSSEEEECCCTTT-T-SSCS--SCCSSEEECCSCCH-H
T ss_pred hhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHc-----CCCEEEEEECCcc-h-hhhc--cCCCCEEEecCCCH-H
Confidence 33335567899999988753 112222233333332 2467777777542 1 1122 34578999999976 7
Q ss_pred HHHHhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHHHH
Q 012492 340 KWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDELK 415 (462)
Q Consensus 340 ~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~~~ 415 (462)
++|..||++|+++|++|++||+++|+|+|++|.. ++|..|++.+.+.|+|+.+. +++.++++|.+++ +|++.++
T Consensus 331 ~ll~~ad~~V~~~G~~t~~Ea~~~G~P~i~~p~~-~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll-~~~~~~~ 408 (441)
T 2yjn_A 331 ALLPTCAATVHHGGPGSWHTAAIHGVPQVILPDG-WDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVL-DDPAHRA 408 (441)
T ss_dssp HHGGGCSEEEECCCHHHHHHHHHTTCCEEECCCS-HHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHH-HCHHHHH
T ss_pred HHHhhCCEEEECCCHHHHHHHHHhCCCEEEeCCc-ccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHh-cCHHHHH
Confidence 8999999999999999999999999999999984 44567999999999998876 6889999999999 7999999
Q ss_pred HHHHHHHhhcCCcHHHHHHHHHHHHHhcc
Q 012492 416 RMSENALKLAQPEAVVDIVKDIHDLAAQR 444 (462)
Q Consensus 416 ~m~~~a~~~~~~~~~~~ia~~i~~l~~~~ 444 (462)
+|++.++++....+++++++.|++++.++
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 437 (441)
T 2yjn_A 409 GAARMRDDMLAEPSPAEVVGICEELAAGR 437 (441)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999998764
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.5e-21 Score=194.28 Aligned_cols=162 Identities=17% Similarity=0.126 Sum_probs=124.4
Q ss_pred CCCcEEEEEeCCCC-CccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHHHh
Q 012492 266 PILPAVLLMGGGEG-MGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGA 344 (462)
Q Consensus 266 ~~~~~iLv~gG~~~-~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~ 344 (462)
.++++|++++|+.+ ..+. +..+++.+.+ .+.++++++|.+... . .....++.+.+|+++ .++|..
T Consensus 236 ~~~~~v~v~~Gs~~~~~~~---~~~~~~al~~-----~~~~~v~~~g~~~~~---~--~~~~~~v~~~~~~~~-~~~l~~ 301 (415)
T 1iir_A 236 AGPPPVYLGFGSLGAPADA---VRVAIDAIRA-----HGRRVILSRGWADLV---L--PDDGADCFAIGEVNH-QVLFGR 301 (415)
T ss_dssp TSSCCEEEECC---CCHHH---HHHHHHHHHH-----TTCCEEECTTCTTCC---C--SSCGGGEEECSSCCH-HHHGGG
T ss_pred hCCCeEEEeCCCCCCcHHH---HHHHHHHHHH-----CCCeEEEEeCCCccc---c--cCCCCCEEEeCcCCh-HHHHhh
Confidence 34567889998885 3332 3333333332 134678888876421 1 134468999999976 478899
Q ss_pred cchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHHHHHHHHH
Q 012492 345 CDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDELKRMSEN 420 (462)
Q Consensus 345 aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~~~~m~~~ 420 (462)
||++|+++|.+|++||+++|+|+|+.|...+ |..|++.+.+.|+|+.++ ++++++++|.++ +|++.++++++.
T Consensus 302 ~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~d-Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l--~~~~~~~~~~~~ 378 (415)
T 1iir_A 302 VAAVIHHGGAGTTHVAARAGAPQILLPQMAD-QPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA--LTPETHARATAV 378 (415)
T ss_dssp SSEEEECCCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH--TSHHHHHHHHHH
T ss_pred CCEEEeCCChhHHHHHHHcCCCEEECCCCCc-cHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH--cCHHHHHHHHHH
Confidence 9999999999999999999999999998544 567999999999998875 688999999998 489999999999
Q ss_pred HHhhcCCcHHHHHHHHHHHHHhcc
Q 012492 421 ALKLAQPEAVVDIVKDIHDLAAQR 444 (462)
Q Consensus 421 a~~~~~~~~~~~ia~~i~~l~~~~ 444 (462)
+++.....+++++++.|++++..+
T Consensus 379 ~~~~~~~~~~~~~~~~i~~~~~~~ 402 (415)
T 1iir_A 379 AGTIRTDGAAVAARLLLDAVSREK 402 (415)
T ss_dssp HHHSCSCHHHHHHHHHHHHHHTC-
T ss_pred HHHHhhcChHHHHHHHHHHHHhcc
Confidence 999888899999999999998754
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.88 E-value=6.1e-21 Score=192.50 Aligned_cols=189 Identities=13% Similarity=0.030 Sum_probs=138.9
Q ss_pred cEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHH
Q 012492 236 QIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRT 315 (462)
Q Consensus 236 ~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~ 315 (462)
++..+|++...... ..+..+.+.+ ++++++|++++|+.+.....+.+..+++.+.+ .+.++++++|.+..
T Consensus 210 ~~~~vG~~~~~~~~---~~~~~~~~~l--~~~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~-----~~~~~v~~~g~~~~ 279 (416)
T 1rrv_A 210 DAVQTGAWLLSDER---PLPPELEAFL--AAGSPPVHIGFGSSSGRGIADAAKVAVEAIRA-----QGRRVILSRGWTEL 279 (416)
T ss_dssp CCEECCCCCCCCCC---CCCHHHHHHH--HSSSCCEEECCTTCCSHHHHHHHHHHHHHHHH-----TTCCEEEECTTTTC
T ss_pred CeeeECCCccCccC---CCCHHHHHHH--hcCCCeEEEecCCCCccChHHHHHHHHHHHHH-----CCCeEEEEeCCccc
Confidence 45566665543211 1123333332 23446788999988753344555555555543 23578888887641
Q ss_pred HHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC-
Q 012492 316 LASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR- 394 (462)
Q Consensus 316 l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~- 394 (462)
+ . ....+++.+.+|++ +.++|..||++|+++|++|++||+++|+|+|+.|... +|..|++.+++.|+|+.+.
T Consensus 280 --~-~--~~~~~~v~~~~~~~-~~~ll~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~-dQ~~na~~l~~~g~g~~~~~ 352 (416)
T 1rrv_A 280 --V-L--PDDRDDCFAIDEVN-FQALFRRVAAVIHHGSAGTEHVATRAGVPQLVIPRNT-DQPYFAGRVAALGIGVAHDG 352 (416)
T ss_dssp --C-C--SCCCTTEEEESSCC-HHHHGGGSSEEEECCCHHHHHHHHHHTCCEEECCCSB-THHHHHHHHHHHTSEEECSS
T ss_pred --c-c--cCCCCCEEEeccCC-hHHHhccCCEEEecCChhHHHHHHHcCCCEEEccCCC-CcHHHHHHHHHCCCccCCCC
Confidence 1 1 23457899999996 6889999999999999999999999999999999854 4567999999999998875
Q ss_pred ---CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHH-HHHHhcc
Q 012492 395 ---SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDI-HDLAAQR 444 (462)
Q Consensus 395 ---~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i-~~l~~~~ 444 (462)
+++.++++|.++ . |++.+++|++.+++.....++ ++++.+ ++++..+
T Consensus 353 ~~~~~~~l~~~i~~l-~-~~~~~~~~~~~~~~~~~~~~~-~~~~~i~e~~~~~~ 403 (416)
T 1rrv_A 353 PTPTFESLSAALTTV-L-APETRARAEAVAGMVLTDGAA-AAADLVLAAVGREK 403 (416)
T ss_dssp SCCCHHHHHHHHHHH-T-SHHHHHHHHHHTTTCCCCHHH-HHHHHHHHHHHC--
T ss_pred CCCCHHHHHHHHHHh-h-CHHHHHHHHHHHHHHhhcCcH-HHHHHHHHHHhccC
Confidence 578999999998 4 899999999999988888899 999999 8887654
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=9.8e-22 Score=195.45 Aligned_cols=311 Identities=14% Similarity=0.115 Sum_probs=194.6
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHh-hcCCcchhh
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAF-HSTSPKWIH 141 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~-~~~~~~~~~ 141 (462)
.+|+|.+.+. |....+..|+++|.+++ ++.+....+ .+ .......+ .+... +.. .+
T Consensus 41 ~~iwih~~s~--G~~~~~~~L~~~L~~~~----~v~v~~~~~--~~--~~~~~~~~---------~~v~~~~~~---p~- 97 (374)
T 2xci_A 41 GALWVHTASI--GEFNTFLPILKELKREH----RILLTYFSP--RA--REYLKTKS---------DFYDCLHPL---PL- 97 (374)
T ss_dssp TCEEEECSSH--HHHHHHHHHHHHHHHHS----CEEEEESCG--GG--HHHHHTTG---------GGCSEEEEC---CC-
T ss_pred CCEEEEcCCH--HHHHHHHHHHHHHHhcC----CEEEEEcCC--cH--HHHHHHhc---------ccccceeEC---CC-
Confidence 5799999998 55778889999999986 233331110 00 00000000 00000 000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCC-CcccccCCCcEEEEcC
Q 012492 142 SCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTC-HPTWFHPRVNRCYCPS 220 (462)
Q Consensus 142 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~-~~~~~~~~~d~~i~~s 220 (462)
.....+.+++++++||+|++....... ..+... .+ |++.+.+.+... ...++.+.+|.++++|
T Consensus 98 ---------~~~~~l~~~l~~~~pDiv~~~~~~~~~--~~~~~~----~~-p~~~~~~~~~~~~~~~~~~~~~d~ii~~S 161 (374)
T 2xci_A 98 ---------DNPFSVKRFEELSKPKALIVVEREFWP--SLIIFT----KV-PKILVNAYAKGSLIEKILSKKFDLIIMRT 161 (374)
T ss_dssp ---------SSHHHHHHHHHHHCCSEEEEESCCCCH--HHHHHC----CS-CEEEEEECCCCCHHHHHHHTTCSEEEESC
T ss_pred ---------CCHHHHHHHHHHhCCCEEEEECccCcH--HHHHHH----hC-CEEEEEeecCchHHHHHHHHhCCEEEECC
Confidence 012345678999999999876433222 122221 13 876655543211 1135567899999999
Q ss_pred HHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCC
Q 012492 221 KEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETG 300 (462)
Q Consensus 221 ~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~ 300 (462)
+.+++.+.+.|++ ++.++||+. |... ..+ +. .+. .++ ++.++ ...++...+++++ +.+.+ +
T Consensus 162 ~~~~~~l~~~g~~--ki~vi~n~~---f~~~-~~~---~~--~l~--~~v-i~~~~-~~~k~~~~ll~A~-~~l~~---~ 222 (374)
T 2xci_A 162 QEDVEKFKTFGAK--RVFSCGNLK---FICQ-KGK---GI--KLK--GEF-IVAGS-IHTGEVEIILKAF-KEIKK---T 222 (374)
T ss_dssp HHHHHHHHTTTCC--SEEECCCGG---GCCC-CCS---CC--CCS--SCE-EEEEE-ECGGGHHHHHHHH-HHHHT---T
T ss_pred HHHHHHHHHcCCC--eEEEcCCCc---cCCC-cCh---hh--hhc--CCE-EEEEe-CCCchHHHHHHHH-HHHHh---h
Confidence 9999999888887 899999863 2111 111 11 111 243 44444 3445555555554 45543 2
Q ss_pred CCCceEEEEccCCH----HHHHHHhhccCC--------CCeEEeccchhHHHHHHhcchheecC-----ChhhHHHHHHh
Q 012492 301 RPIGQLIIICGRNR----TLASTLQSEEWK--------IPVKVRGFETQMEKWMGACDCIITKA-----GPGTIAEALIR 363 (462)
Q Consensus 301 ~~~~~~lvv~G~~~----~l~~~~~~~~~~--------~~V~~~g~~~~~~~l~~~aD~vV~~s-----g~~t~~EAla~ 363 (462)
.|+++++++ |++. ++.+.++++++. .+|.+.|+.+++..+|+.||+++.+| ||.+++|||++
T Consensus 223 ~p~~~lviv-G~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~ 301 (374)
T 2xci_A 223 YSSLKLILV-PRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCW 301 (374)
T ss_dssp CTTCEEEEE-ESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTT
T ss_pred CCCcEEEEE-CCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHh
Confidence 578876655 5443 355566666654 47888898899999999999976543 47899999999
Q ss_pred CCCEEEecCCCCccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCc--HHHHHHH
Q 012492 364 GLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPE--AVVDIVK 435 (462)
Q Consensus 364 G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~--~~~~ia~ 435 (462)
|+|||+.+..++... .+..+.+.|.++.+.|+++++++|.+++ +| +.+++|++++++++... +++++++
T Consensus 302 G~PVI~~~~~~~~~e-~~~~~~~~G~l~~~~d~~~La~ai~~ll-~d-~~r~~mg~~ar~~~~~~~ga~~~~~~ 372 (374)
T 2xci_A 302 GIPVIYGPYTHKVND-LKEFLEKEGAGFEVKNETELVTKLTELL-SV-KKEIKVEEKSREIKGCYLEKLREFLR 372 (374)
T ss_dssp TCCEEECSCCTTSHH-HHHHHHHTTCEEECCSHHHHHHHHHHHH-HS-CCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEECCCccChHH-HHHHHHHCCCEEEeCCHHHHHHHHHHHH-hH-HHHHHHHHHHHHHHHhcccHHHHHHh
Confidence 999998765433221 2334456788888899999999999999 68 99999999999887542 3344443
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.1e-21 Score=201.41 Aligned_cols=337 Identities=9% Similarity=-0.024 Sum_probs=206.1
Q ss_pred CCCCCeEEEEecCCC-chHHHHHHHHHHH--HhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcC
Q 012492 59 AERTKNVLILMSDTG-GGHRASAEAIRDA--FKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHST 135 (462)
Q Consensus 59 ~~~~~kIli~~~~~G-~Gh~~~a~aLa~~--L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~ 135 (462)
+.++|||++++.+.+ +|.......|++. +.+.+ +++++....+ . ........+.. .. .+...
T Consensus 202 ~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~---~~v~~~~~~~---~-~~~~~~~~~~~------~~--~~~~~ 266 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPD---LQMHLFATSG---D-DGSTLRTRLAQ------AS--TLHDV 266 (568)
T ss_dssp SSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTT---EEEEEEESSC---C-CSCHHHHHHHH------TS--EEEEC
T ss_pred CCCCeEEEEECcccccChHHHHHHHHHhhccCCccc---EEEEEEECCC---C-CccHHHHHHHh------cC--eEEEC
Confidence 356789999997652 4677778889999 66654 4666553211 0 00111111110 00 11111
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCccc--chHHHHHHHHcCCCCCCeEEEEecCCCC-CC-cccccC
Q 012492 136 SPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLM--QHIPLWVLKWQGLQKKVIFVTVITDLNT-CH-PTWFHP 211 (462)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~--~~~~~~~~~~~~~~~~iP~v~~~~d~~~-~~-~~~~~~ 211 (462)
. . ....++.+.+++.+||+||+.++.. ..... .++ ...|++...+.+.. .. ....+.
T Consensus 267 ~--~-----------~~~~~l~~~i~~~~~Div~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 327 (568)
T 2vsy_A 267 T--A-----------LGHLATAKHIRHHGIDLLFDLRGWGGGGRPEV-FAL-----RPAPVQVNWLAYPGTSGAPWMDYV 327 (568)
T ss_dssp T--T-----------CCHHHHHHHHHHTTCSEEEECSSCTTCSSCHH-HHT-----CCSSEEEEESSSSSCCCCTTCCEE
T ss_pred C--C-----------CCHHHHHHHHHhCCCCEEEECCCCCCcchHHH-Hhc-----CCCceeEeeecCCcccCCCCceEE
Confidence 0 0 0123466789999999999866443 22222 222 13565544443211 00 111112
Q ss_pred CCcEEEEcCHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHH
Q 012492 212 RVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALG 291 (462)
Q Consensus 212 ~~d~~i~~s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~ 291 (462)
.+|.++++|+...+ +. +++.+++|.+.+........+...|+++|++++. +++.+|+... |+...++.++.
T Consensus 328 ~~d~~i~~s~~~~~------~~-~~i~~ipn~~~~~~~~~~~~~~~~r~~~~~~~~~-~v~~~g~~~~-K~~~~li~a~~ 398 (568)
T 2vsy_A 328 LGDAFALPPALEPF------YS-EHVLRLQGAFQPSDTSRVVAEPPSRTQCGLPEQG-VVLCCFNNSY-KLNPQSMARML 398 (568)
T ss_dssp EECTTTSCTTTGGG------CS-SEEEECSSCSCCCCTTCCCCCCCCTGGGTCCTTS-CEEEECCCGG-GCCHHHHHHHH
T ss_pred EECCCcCCcccccC------Cc-ceeEcCCCcCCCCCCCCCCCCCCCccccCCCCCC-EEEEeCCccc-cCCHHHHHHHH
Confidence 34556667765432 22 6899999854432111111233456778987654 4555555444 76777776664
Q ss_pred HhhhcccCCCCCceEEEEccCCH---HHHHHHhhccCC-CCeEEeccc--hhHHHHHHhcchheecC---ChhhHHHHHH
Q 012492 292 ESLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWK-IPVKVRGFE--TQMEKWMGACDCIITKA---GPGTIAEALI 362 (462)
Q Consensus 292 ~~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~-~~V~~~g~~--~~~~~l~~~aD~vV~~s---g~~t~~EAla 362 (462)
+.+.+ .|+++++++++.+. .+.+.++++++. ++|.|.|++ +++.++|+.||++|.+| +|++++|||+
T Consensus 399 ~l~~~----~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~~g~~~lEAma 474 (568)
T 2vsy_A 399 AVLRE----VPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPYNAHTTASDALW 474 (568)
T ss_dssp HHHHH----CTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHH
T ss_pred HHHHh----CCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCCCCcHHHHHHHh
Confidence 43332 47787665542443 356667777887 899999999 48999999999999876 4899999999
Q ss_pred hCCCEEEecCCCCccccchHHHHHCCce-eeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc---CCcHHHHHHHHHH
Q 012492 363 RGLPIILNDYIPGQEKGNVPYVVDNGAG-VFTRSPKETARIVTEWFSTKTDELKRMSENALKLA---QPEAVVDIVKDIH 438 (462)
Q Consensus 363 ~G~PvI~~~~~~~~~~~n~~~l~~~G~g-~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~---~~~~~~~ia~~i~ 438 (462)
+|+|||+.+.........+..+...|.. ++.++++++++++.+++ +|++.+++|++++++.+ ..++++.+++.++
T Consensus 475 ~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~~~~~la~~i~~l~-~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 553 (568)
T 2vsy_A 475 TGCPVLTTPGETFAARVAGSLNHHLGLDEMNVADDAAFVAKAVALA-SDPAALTALHARVDVLRRASGVFHMDGFADDFG 553 (568)
T ss_dssp TTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCSSHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHH
T ss_pred CCCCEEeccCCCchHHHHHHHHHHCCChhhhcCCHHHHHHHHHHHh-cCHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHH
Confidence 9999999543211111112334444543 34458999999999999 79999999999999887 6799999999998
Q ss_pred HHHhc
Q 012492 439 DLAAQ 443 (462)
Q Consensus 439 ~l~~~ 443 (462)
+++++
T Consensus 554 ~~y~~ 558 (568)
T 2vsy_A 554 ALLQA 558 (568)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87753
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.4e-19 Score=182.82 Aligned_cols=217 Identities=15% Similarity=0.099 Sum_probs=147.4
Q ss_pred CCcEEEEcCHHHHHHHHHc-C--------CCCCcEEEcCCCCChhhhcccC-------------------ChHHHHHHcC
Q 012492 212 RVNRCYCPSKEVAKRASYF-G--------LEVSQIRVFGLPIRPSFVRAVI-------------------SKDNLRLELQ 263 (462)
Q Consensus 212 ~~d~~i~~s~~~~~~l~~~-g--------i~~~~i~v~g~pv~~~~~~~~~-------------------~~~~~r~~l~ 263 (462)
.+|+++++|+..++.+... + .+..++.++.|+|+.+.+.+.. .+..+++.+|
T Consensus 241 ~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~g 320 (536)
T 3vue_A 241 EADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAG 320 (536)
T ss_dssp HCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTT
T ss_pred hccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcC
Confidence 3789999999998887652 2 2346899999999877655421 1234556677
Q ss_pred CC--CCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhh--ccCCCCeEEeccc--hh
Q 012492 264 MD--PILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQS--EEWKIPVKVRGFE--TQ 337 (462)
Q Consensus 264 l~--~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~--~~~~~~V~~~g~~--~~ 337 (462)
++ ++.|+|+++|+....|++..+++++ +.+.+ .+.++++++.........++. .....++.+.+.. ++
T Consensus 321 l~~d~~~p~i~~vgRl~~~Kg~~~li~a~-~~l~~-----~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 394 (536)
T 3vue_A 321 LPVDRKIPLIAFIGRLEEQKGPDVMAAAI-PELMQ-----EDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPL 394 (536)
T ss_dssp SCCCTTSCEEEEECCBSGGGCHHHHHHHH-HHHTT-----SSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHH
T ss_pred CCCCCCCcEEEEEeeccccCChHHHHHHH-HHhHh-----hCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHH
Confidence 74 5678777777666666666666655 44543 245655443333322222222 2456788888765 56
Q ss_pred HHHHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCC-cee----------eeC--CHHHHH
Q 012492 338 MEKWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNG-AGV----------FTR--SPKETA 400 (462)
Q Consensus 338 ~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G-~g~----------~~~--~~~~la 400 (462)
+..+|+.||++|.+|. |.+++|||++|+|+|+++.++ ...++.+| .|+ +++ |+++++
T Consensus 395 ~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG------~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la 468 (536)
T 3vue_A 395 AHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGG------LVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVA 468 (536)
T ss_dssp HHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTH------HHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHH
T ss_pred HHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCC------chheeeCCCCccccccCCCceeEECCCCHHHHH
Confidence 7889999999999984 899999999999999998642 22233333 344 332 578899
Q ss_pred HHHHHHhc--CCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 401 RIVTEWFS--TKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 401 ~~i~~ll~--~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
++|.+++. +++ .+++|.+++. .+.++|+++|+.++++..+
T Consensus 469 ~ai~ral~~~~~~-~~~~~~~~am--~~~fSW~~~A~~y~~ly~~ 510 (536)
T 3vue_A 469 ATLKRAIKVVGTP-AYEEMVRNCM--NQDLSWKGPAKNWENVLLG 510 (536)
T ss_dssp HHHHHHHHHTTSH-HHHHHHHHHH--HSCCSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCcH-HHHHHHHHHH--HhcCCHHHHHHHHHHHHHH
Confidence 99988763 344 4667777663 3679999999999998864
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=8e-20 Score=173.06 Aligned_cols=267 Identities=15% Similarity=0.107 Sum_probs=165.1
Q ss_pred CeEEEEe---cCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcch
Q 012492 63 KNVLILM---SDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKW 139 (462)
Q Consensus 63 ~kIli~~---~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~ 139 (462)
|||+|.+ ..+|.||.+++++||++|+ . ..|++... .+.....+ .| + .......
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~-~-----v~F~~~~~---~~~~~~~~--g~-------~-----v~~l~~~- 56 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS-D-----VSFACLPL---EGSLIDEI--PY-------P-----VYELSSE- 56 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS-S-----EEEEECCC---TTCCGGGC--CS-------C-----EEECSSS-
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH-h-----CEEEEecC---cHhHHHHC--CC-------e-----EEEcCcc-
Confidence 7999997 3489999999999999998 1 33444211 11111110 00 0 0000000
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccccCCCcEEEEc
Q 012492 140 IHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCP 219 (462)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~~~~d~~i~~ 219 (462)
....+.+.+++.+||+||.++.....-.....+.. .+.+++ ++.|... . ..+|.++-+
T Consensus 57 ------------d~~~~~~~l~~~~~d~lIvD~Y~~~~~~~~~lk~~---~~~~i~-~iDD~~~----~--~~~Dllin~ 114 (282)
T 3hbm_A 57 ------------SIYELINLIKEEKFELLIIDHYGISVDDEKLIKLE---TGVKIL-SFDDEIK----P--HHCDILLNV 114 (282)
T ss_dssp ------------CHHHHHHHHHHHTCSEEEEECTTCCHHHHHHHHHH---HCCEEE-EECSSCC----C--CCCSEEEEC
T ss_pred ------------CHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHh---cCcEEE-EEecCCC----c--ccCCEEEeC
Confidence 01234566888999999999976654322233321 145554 5677641 1 247888876
Q ss_pred CHHHHHHHHHcCCCCCcEEEcCC---CCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhc
Q 012492 220 SKEVAKRASYFGLEVSQIRVFGL---PIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLD 296 (462)
Q Consensus 220 s~~~~~~l~~~gi~~~~i~v~g~---pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~ 296 (462)
+........+..+|+.....+|+ |++++|.... +. ..++.+.||+++|+.+..+.. ..+++.|.+
T Consensus 115 ~~~~~~~~Y~~~~p~~~~~l~G~~Y~~lR~eF~~~~--~~-------~r~~~~~ILv~~GG~d~~~l~---~~vl~~L~~ 182 (282)
T 3hbm_A 115 NAYAKASDYEGLVPFKCEVRCGFSYALIREEFYQEA--KE-------NRKKKYDFFICMGGTDIKNLS---LQIASELPK 182 (282)
T ss_dssp STTCCGGGGTTTCC-CCEEEESGGGCCCCHHHHHHT--TC-------CCCCCEEEEEECCSCCTTCHH---HHHHHHSCT
T ss_pred CcccchhhccccCCCCCeEeeCCcccccCHHHHHhh--hh-------ccccCCeEEEEECCCchhhHH---HHHHHHhhc
Confidence 54332111112345555667888 8999887631 10 112356788776665544433 233344432
Q ss_pred ccCCCCCceEEEEccCCHHHHHHHhhc-cCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCCC
Q 012492 297 KETGRPIGQLIIICGRNRTLASTLQSE-EWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPG 375 (462)
Q Consensus 297 ~~~~~~~~~~lvv~G~~~~l~~~~~~~-~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~ 375 (462)
. .++.+++|.+....+.+++. ....++++.+|.++|.++|+.||++|+++| +|++|++++|+|+|+.|...+
T Consensus 183 ----~--~~i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDlvI~~gG-~T~~E~~~~g~P~i~ip~~~~ 255 (282)
T 3hbm_A 183 ----T--KIISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNKLIISAS-SLVNEALLLKANFKAICYVKN 255 (282)
T ss_dssp ----T--SCEEEEECTTCTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEEEEEESS-HHHHHHHHTTCCEEEECCSGG
T ss_pred ----C--CCEEEEECCCchHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCEEEECCc-HHHHHHHHcCCCEEEEeCCCC
Confidence 1 24667788875433333321 223489999999999999999999999755 899999999999999997655
Q ss_pred ccccchHHHHHCCceeeeCC
Q 012492 376 QEKGNVPYVVDNGAGVFTRS 395 (462)
Q Consensus 376 ~~~~n~~~l~~~G~g~~~~~ 395 (462)
| ..|++.+.+.|++..+..
T Consensus 256 Q-~~nA~~l~~~G~~~~~~~ 274 (282)
T 3hbm_A 256 Q-ESTATWLAKKGYEVEYKY 274 (282)
T ss_dssp G-HHHHHHHHHTTCEEECGG
T ss_pred H-HHHHHHHHHCCCEEEcch
Confidence 4 569999999999988764
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=5.8e-20 Score=184.94 Aligned_cols=246 Identities=13% Similarity=0.028 Sum_probs=152.9
Q ss_pred hhCCCEEEECCcccchHHHHHHH----HcCCCCCCeEEEEecCCCCC-Cc--------ccccCCCc--EEEEcCHHHHHH
Q 012492 162 EYKPDIIISVHPLMQHIPLWVLK----WQGLQKKVIFVTVITDLNTC-HP--------TWFHPRVN--RCYCPSKEVAKR 226 (462)
Q Consensus 162 ~~kPDvVi~~~~~~~~~~~~~~~----~~~~~~~iP~v~~~~d~~~~-~~--------~~~~~~~d--~~i~~s~~~~~~ 226 (462)
..+||+||+++...........+ ..+. .+.|.+.+++++... ++ .+.+...+ .++++|+..++.
T Consensus 130 ~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~~~~~ 208 (413)
T 2x0d_A 130 VAKHDIFIATAWWTAYAAQRIVSWQSDTYGI-PPNKILYIIQDFEPGFYQWSSQYVLAESTYKYRGPQIAVFNSELLKQY 208 (413)
T ss_dssp ECTTEEEEECSHHHHHHHHHHHHHHHHHHTC-CCCCEEEEECSCGGGGSCSSHHHHHHHHTTSCCSCEEEEEESHHHHHH
T ss_pred CCCCCEEEEehHHHHHHHHHhhhhhhhhccc-ccCcEEEEEeechhhcCccChHHHHHHHHhccCCceEEEEcCHHHHHH
Confidence 35799999886432221111110 0111 245666667776421 11 12233333 578899999999
Q ss_pred HHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCcc-HHHHHHHHHHhhhcccCCCCC--
Q 012492 227 ASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGP-VKETAMALGESLLDKETGRPI-- 303 (462)
Q Consensus 227 l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~-~~~~l~~l~~~l~~~~~~~~~-- 303 (462)
+.+.|++..++.+++++++.+.+.+ + ..+ .++.+.++++|+....++ ...+++++ +.+.+. .|+
T Consensus 209 l~~~g~~~~~~~~i~~g~d~~~~~~---~-----~~~-~~~~~~il~~gr~~~~~Kg~~~li~A~-~~l~~~---~~~~~ 275 (413)
T 2x0d_A 209 FNNKGYNFTDEYFFQPKINTTLKNY---I-----NDK-RQKEKIILVYGRPSVKRNAFTLIVEAL-KIFVQK---YDRSN 275 (413)
T ss_dssp HHHHTCCCSEEEEECCCCCHHHHTT---T-----TSC-CCCCSEEEEEECTTCGGGCHHHHHHHH-HHHHHH---CTTGG
T ss_pred HHHcCCCCCceEEeCCCcCchhhcc---c-----ccc-cCCCCEEEEEecCchhccCHHHHHHHH-HHHHHh---CCCCC
Confidence 9888887677889999987664432 0 112 234556777777655544 44445444 455432 343
Q ss_pred -ceEEEEccCCHHHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCc
Q 012492 304 -GQLIIICGRNRTLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQ 376 (462)
Q Consensus 304 -~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~ 376 (462)
++++ ++|++... .+++...+|+|.|++ +++.++|+.||++|++|. |++++||||||+|||+... +..
T Consensus 276 ~~~l~-ivG~~~~~----~~l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~~~-g~~ 349 (413)
T 2x0d_A 276 EWKII-SVGEKHKD----IALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITNKY-ENK 349 (413)
T ss_dssp GCEEE-EEESCCCC----EEEETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEECB-TTB
T ss_pred ceEEE-EEcCCchh----hhcCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEeCC-Ccc
Confidence 6655 45655321 345666789999997 799999999999998762 8899999999999999542 222
Q ss_pred cccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHH
Q 012492 377 EKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKD 436 (462)
Q Consensus 377 ~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~ 436 (462)
+.+.+...|++++ |+++++++|.+++ +|++.+++ ++++.+..++|+++++.
T Consensus 350 -----e~v~~~~~G~lv~~~d~~~la~ai~~ll-~~~~~~~~---~~~~~~~~~~W~~~~~~ 402 (413)
T 2x0d_A 350 -----DLSNWHSNIVSLEQLNPENIAETLVELC-MSFNNRDV---DKKESSNMMFYINEFNE 402 (413)
T ss_dssp -----CGGGTBTTEEEESSCSHHHHHHHHHHHH-HHTC----------CCBSCGGGCCCC--
T ss_pred -----hhhhcCCCEEEeCCCCHHHHHHHHHHHH-cCHHHHHH---hHHHHHHhCCHHHHHHH
Confidence 1233334677664 7999999999999 68877776 56777888999877544
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5e-18 Score=170.62 Aligned_cols=222 Identities=13% Similarity=0.057 Sum_probs=150.2
Q ss_pred CCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCC-----CC------cccccCCCcEEEEcCHHHHHHHHHcCC
Q 012492 164 KPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT-----CH------PTWFHPRVNRCYCPSKEVAKRASYFGL 232 (462)
Q Consensus 164 kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~-----~~------~~~~~~~~d~~i~~s~~~~~~l~~~gi 232 (462)
+||+|+......... ..+++. .++|++...|+... .. ..+..+.+|.++++|+..++.+.+.+
T Consensus 124 ~~DvIh~~~~~~~~~-~~~~~~----~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~- 197 (406)
T 2hy7_A 124 ESDVIVFESGIAVAF-IELAKR----VNPAAKLVYRASDGLSTINVASYIEREFDRVAPTLDVIALVSPAMAAEVVSRD- 197 (406)
T ss_dssp HCSEEEEESSGGGGG-HHHHHH----HCTTSEEEEEESSCHHHHTCCHHHHHHHHHHGGGCSEEEESCGGGGGGCSCST-
T ss_pred CCCEEEECCchHHHH-HHHHHH----hCCCEEEEEeccchhhcccccHHHHHHHHHHHHhCCEEEEcCHHHHHHHHhcC-
Confidence 699998433332221 134444 26787766664321 00 01235678999999999887765544
Q ss_pred CCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCC-cEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEcc
Q 012492 233 EVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPIL-PAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICG 311 (462)
Q Consensus 233 ~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~-~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G 311 (462)
++.+++|+++...+.+. .+. +.+. ++++ +.|+....+.. +..+.+. .|++++++ +|
T Consensus 198 ---~i~vipngvd~~~f~~~-~~~--------~~~~~~~i~-~vGrl~~~Kg~--~~~l~~~-------~~~~~l~i-vG 254 (406)
T 2hy7_A 198 ---NVFHVGHGVDHNLDQLG-DPS--------PYAEGIHAV-AVGSMLFDPEF--FVVASKA-------FPQVTFHV-IG 254 (406)
T ss_dssp ---TEEECCCCBCTTHHHHH-CSC--------SCCSSEEEE-EECCTTBCHHH--HHHHHHH-------CTTEEEEE-ES
T ss_pred ---CEEEEcCCcChHhcCcc-ccc--------ccCCCcEEE-EEeccccccCH--HHHHHHh-------CCCeEEEE-Ee
Confidence 79999999987655431 110 1223 4444 44555544333 3333322 36777655 46
Q ss_pred CCHHHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheecCC----hhhHHHHH-------HhCCCEEEecCCCCccc
Q 012492 312 RNRTLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAG----PGTIAEAL-------IRGLPIILNDYIPGQEK 378 (462)
Q Consensus 312 ~~~~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg----~~t~~EAl-------a~G~PvI~~~~~~~~~~ 378 (462)
.+. ++++++.++|+|.|++ +++.++|+.||++|.+|. |++++||| +||+|||+++.
T Consensus 255 ~g~-----~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------ 323 (406)
T 2hy7_A 255 SGM-----GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------ 323 (406)
T ss_dssp CSS-----CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------
T ss_pred Cch-----HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------
Confidence 664 5566778899999998 689999999999998763 88999999 99999999975
Q ss_pred cchHHHHHCCceee-e--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH
Q 012492 379 GNVPYVVDNGAGVF-T--RSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDL 440 (462)
Q Consensus 379 ~n~~~l~~~G~g~~-~--~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l 440 (462)
+.+...|++ + .|+++++++|.+++ +|++ ++.++.++|+.+++.++++
T Consensus 324 -----v~~~~~G~l~v~~~d~~~la~ai~~ll-~~~~---------~~~~~~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 324 -----VVGPYKSRFGYTPGNADSVIAAITQAL-EAPR---------VRYRQCLNWSDTTDRVLDP 373 (406)
T ss_dssp -----GTCSCSSEEEECTTCHHHHHHHHHHHH-HCCC---------CCCSCCCBHHHHHHHHHCG
T ss_pred -----cccCcceEEEeCCCCHHHHHHHHHHHH-hCcc---------hhhhhcCCHHHHHHHHHHh
Confidence 222334555 4 47999999999999 5665 1556789999999999988
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.7e-16 Score=161.95 Aligned_cols=339 Identities=13% Similarity=0.037 Sum_probs=190.2
Q ss_pred CCCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHH--HHHhhhHHHHHHhhcCC-c
Q 012492 61 RTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYK--FMVKHVQLWKVAFHSTS-P 137 (462)
Q Consensus 61 ~~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~--~~~~~~~l~~~~~~~~~-~ 137 (462)
.+++|+++..+. .||..+.++||+.|..+.+ ++.|.++.............+.+.-. .-++...+......... .
T Consensus 8 ~~~~vv~~p~p~-~GHi~P~l~La~~L~~r~p-G~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~ 85 (463)
T 2acv_A 8 KNSELIFIPAPG-IGHLASALEFAKLLTNHDK-NLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQELL 85 (463)
T ss_dssp HCEEEEEECCSS-TTTHHHHHHHHHHHHHTCT-TEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCGGGG
T ss_pred CCCEEEEEcCcc-cchHHHHHHHHHHHHhcCC-CcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCccccc
Confidence 346899999888 5999999999999998821 13555442211000000001111000 00000000000000000 0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHh---hCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCC------------
Q 012492 138 KWIHSCYLAAMAAYYAKEVEAGLME---YKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLN------------ 202 (462)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~l~~~l~~---~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~------------ 202 (462)
......+.... ......+.+++++ .+||+||++....... .+++. .+||.+.+.+...
T Consensus 86 ~~~~~~~~~~~-~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~--~vA~~----lgiP~v~~~~~~~~~~~~~~~~~~~ 158 (463)
T 2acv_A 86 KSPEFYILTFL-ESLIPHVKATIKTILSNKVVGLVLDFFCVSMI--DVGNE----FGIPSYLFLTSNVGFLSLMLSLKNR 158 (463)
T ss_dssp GSHHHHHHHHH-HHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGH--HHHHH----TTCCEEEEESSCHHHHHHHHHGGGS
T ss_pred CCccHHHHHHH-HhhhHHHHHHHHhccCCCCeEEEECCcchhHH--HHHHH----cCCCEEEEeCchHHHHHHHHHHHhh
Confidence 00001111111 1233466777777 6899999988654432 34554 4899876543110
Q ss_pred ---------------CCCccc------------c----------------cCCCcEEEEcCHHHHHH-H----HHcCCCC
Q 012492 203 ---------------TCHPTW------------F----------------HPRVNRCYCPSKEVAKR-A----SYFGLEV 234 (462)
Q Consensus 203 ---------------~~~~~~------------~----------------~~~~d~~i~~s~~~~~~-l----~~~gi~~ 234 (462)
...+.+ + .+..+.+++.+....+. . .+...|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~ 238 (463)
T 2acv_A 159 QIEEVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKI 238 (463)
T ss_dssp CTTCCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTS
T ss_pred cccCCCCCccccCceeECCCCCCCCChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccC
Confidence 000111 0 02345566655433322 2 1211113
Q ss_pred CcEEEcCCCCChhhh-cc-c---CChHHHHHHcCCCCCCcEEEEEeCCCC-CccHHHHHHHHHHhhhcccCCCCCceEEE
Q 012492 235 SQIRVFGLPIRPSFV-RA-V---ISKDNLRLELQMDPILPAVLLMGGGEG-MGPVKETAMALGESLLDKETGRPIGQLII 308 (462)
Q Consensus 235 ~~i~v~g~pv~~~~~-~~-~---~~~~~~r~~l~l~~~~~~iLv~gG~~~-~~~~~~~l~~l~~~l~~~~~~~~~~~~lv 308 (462)
.++..+| |+..... .. . ...++..+.++..+++++|++++|+.+ .-. .+.+.++++.|.+ .+.+++|
T Consensus 239 ~~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~-~~~~~~~~~~l~~-----~~~~~l~ 311 (463)
T 2acv_A 239 PPIYAVG-PLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFG-PSQIREIALGLKH-----SGVRFLW 311 (463)
T ss_dssp CCEEECC-CCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCC-HHHHHHHHHHHHH-----HTCEEEE
T ss_pred CcEEEeC-CCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCC-HHHHHHHHHHHHh-----CCCcEEE
Confidence 4788999 5543211 00 0 112345556655556789999999988 433 2334455555543 2468999
Q ss_pred EccCC-H----HHHHHHhhccCCCCeEEeccchhHHHHHH--hcchheecCChhhHHHHHHhCCCEEEecCCCCccccch
Q 012492 309 ICGRN-R----TLASTLQSEEWKIPVKVRGFETQMEKWMG--ACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNV 381 (462)
Q Consensus 309 v~G~~-~----~l~~~~~~~~~~~~V~~~g~~~~~~~l~~--~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~ 381 (462)
++|.+ . .+.+.+. ...++.+.+|.+++ .+|+ ++|+||+++|.+|++||+++|+|+|+.|...+| ..|+
T Consensus 312 ~~~~~~~~l~~~~~~~~~---~~~~~~v~~w~pq~-~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ-~~Na 386 (463)
T 2acv_A 312 SNSAEKKVFPEGFLEWME---LEGKGMICGWAPQV-EVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQ-QLNA 386 (463)
T ss_dssp ECCCCGGGSCTTHHHHHH---HHCSEEEESSCCHH-HHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTH-HHHH
T ss_pred EECCCcccCChhHHHhhc---cCCCEEEEccCCHH-HHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhh-HHHH
Confidence 99875 1 1222220 02478899999887 4665 799999999999999999999999999986555 6699
Q ss_pred HHH-HHCCceeee-C---------CHHHHHHHHHHHhcCCHHHHHHHHHH
Q 012492 382 PYV-VDNGAGVFT-R---------SPKETARIVTEWFSTKTDELKRMSEN 420 (462)
Q Consensus 382 ~~l-~~~G~g~~~-~---------~~~~la~~i~~ll~~d~~~~~~m~~~ 420 (462)
..+ .+.|+|+.+ . +.+++.++|.++|+++++.+++..+.
T Consensus 387 ~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l 436 (463)
T 2acv_A 387 FRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEM 436 (463)
T ss_dssp HHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHH
T ss_pred HHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 995 789999887 2 46889999999993245555554443
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=3.8e-16 Score=158.98 Aligned_cols=156 Identities=19% Similarity=0.151 Sum_probs=113.2
Q ss_pred HHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHH--HHHHHhhccCCCCeEEeccc
Q 012492 258 LRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRT--LASTLQSEEWKIPVKVRGFE 335 (462)
Q Consensus 258 ~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~--l~~~~~~~~~~~~V~~~g~~ 335 (462)
..+.++..+++++|++++|+.+.... +.+.++++.+.+ .+.+++|++|.+.. +.+.+.+ ....|+.+.+|.
T Consensus 261 ~~~wl~~~~~~~vv~vs~GS~~~~~~-~~~~~~~~~l~~-----~~~~~lw~~~~~~~~~l~~~~~~-~~~~~~~v~~w~ 333 (456)
T 2c1x_A 261 CLQWLKERKPTSVVYISFGTVTTPPP-AEVVALSEALEA-----SRVPFIWSLRDKARVHLPEGFLE-KTRGYGMVVPWA 333 (456)
T ss_dssp HHHHHHTSCTTCEEEEECCSSCCCCH-HHHHHHHHHHHH-----HTCCEEEECCGGGGGGSCTTHHH-HHTTTEEEESCC
T ss_pred HHHHHhcCCCcceEEEecCccccCCH-HHHHHHHHHHHh-----cCCeEEEEECCcchhhCCHHHHh-hcCCceEEecCC
Confidence 44555555567899999999886543 445555555543 24578899887531 1111111 123589999999
Q ss_pred hhHHHHHH--hcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHC-CceeeeC----CHHHHHHHHHHHhc
Q 012492 336 TQMEKWMG--ACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDN-GAGVFTR----SPKETARIVTEWFS 408 (462)
Q Consensus 336 ~~~~~l~~--~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~-G~g~~~~----~~~~la~~i~~ll~ 408 (462)
+++ ++|+ ++|+||+++|.+|++||+++|+|+|+.|...+| ..|++.+++. |+|+.+. +.+++.++|.++|
T Consensus 334 pq~-~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ-~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll- 410 (456)
T 2c1x_A 334 PQA-EVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQ-RLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQIL- 410 (456)
T ss_dssp CHH-HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH-HHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHH-
T ss_pred CHH-HHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhH-HHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHH-
Confidence 886 6788 889999999999999999999999999986665 5599999999 9999875 5789999999999
Q ss_pred CCHHHHHHHHHHHHhh
Q 012492 409 TKTDELKRMSENALKL 424 (462)
Q Consensus 409 ~d~~~~~~m~~~a~~~ 424 (462)
+|++ .++|+++++++
T Consensus 411 ~~~~-~~~~r~~a~~l 425 (456)
T 2c1x_A 411 SQEK-GKKLRENLRAL 425 (456)
T ss_dssp HSHH-HHHHHHHHHHH
T ss_pred CCCc-HHHHHHHHHHH
Confidence 6774 34444444443
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.4e-16 Score=143.58 Aligned_cols=172 Identities=22% Similarity=0.177 Sum_probs=121.8
Q ss_pred cCCCCChhhhc--ccCC-----hHHHHHHcCCCCCCcEEEEEeCCC-CCccHHHHHHHHHHhhh--cccCCCCCceEEEE
Q 012492 240 FGLPIRPSFVR--AVIS-----KDNLRLELQMDPILPAVLLMGGGE-GMGPVKETAMALGESLL--DKETGRPIGQLIII 309 (462)
Q Consensus 240 ~g~pv~~~~~~--~~~~-----~~~~r~~l~l~~~~~~iLv~gG~~-~~~~~~~~l~~l~~~l~--~~~~~~~~~~~lvv 309 (462)
++|+++...+. +... +..+++++++++ .++++++|+.. ..++...++.++ +.+. +. .|+++++++
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~-~~~i~~~G~~~~~~K~~~~li~a~-~~l~~~~~---~~~~~l~i~ 76 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDE-GVTFMFIGRFDRGQKGVDVLLKAI-EILSSKKE---FQEMRFIII 76 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCS-CEEEEEESCBCSSSSCHHHHHHHH-HHHTTSGG---GGGEEEEEE
T ss_pred CCCccChhhccccccccchhhHHHHHHHHcCCCC-CCEEEEeeccccccCCHHHHHHHH-HHHHhhcc---CCCeEEEEE
Confidence 46778877665 5322 677899999975 45555555444 445566656554 4553 31 367877665
Q ss_pred ccCCH----HHHHHHhhccCCCCeEE-eccch--hHHHHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCccc
Q 012492 310 CGRNR----TLASTLQSEEWKIPVKV-RGFET--QMEKWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEK 378 (462)
Q Consensus 310 ~G~~~----~l~~~~~~~~~~~~V~~-~g~~~--~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~ 378 (462)
++... .+.+.+++++ +|++ .|+++ ++..+|+.||++|.++. +.+++|||++|+|+|+++.++
T Consensus 77 G~~~~~~~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~---- 149 (200)
T 2bfw_A 77 GKGDPELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGG---- 149 (200)
T ss_dssp CCBCHHHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHH----
T ss_pred CCCChHHHHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCCC----
Confidence 54441 2444455444 9999 99996 99999999999998873 889999999999999997531
Q ss_pred cchHHHHHCCceeeeC--CHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhcC
Q 012492 379 GNVPYVVDNGAGVFTR--SPKETARIVTEWFST-KTDELKRMSENALKLAQ 426 (462)
Q Consensus 379 ~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~-d~~~~~~m~~~a~~~~~ 426 (462)
..+.+ +.+.|+++. ++++++++|.+++ + |++.+++|++++++++.
T Consensus 150 -~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~-~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 150 -LRDII-TNETGILVKAGDPGELANAILKAL-ELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp -HHHHC-CTTTCEEECTTCHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHH
T ss_pred -hHHHc-CCCceEEecCCCHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHH
Confidence 22333 445677765 8999999999999 7 99999999999988654
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.2e-15 Score=153.76 Aligned_cols=263 Identities=11% Similarity=0.001 Sum_probs=169.1
Q ss_pred CCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCccc--c---------cCCCcEEEEcCHHHHHHHHH---
Q 012492 164 KPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTW--F---------HPRVNRCYCPSKEVAKRASY--- 229 (462)
Q Consensus 164 kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~--~---------~~~~d~~i~~s~~~~~~l~~--- 229 (462)
.+|+|+++.......+.. ++... .++|++.+.|...+....| + ...+|.+...+....+.+..
T Consensus 123 ~~DiV~vHdyhl~~l~~~-lr~~~--~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~ 199 (482)
T 1uqt_A 123 DDDIIWIHDYHLLPFAHE-LRKRG--VNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLS 199 (482)
T ss_dssp TTCEEEEESGGGTTHHHH-HHHTT--CCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHH-HHHhC--CCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHH
Confidence 459999887655544333 33322 4799988777532111100 0 01357776666655544432
Q ss_pred --cC------------CCCCcEEEcCCCCChhhhccc---C-C--hHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHH
Q 012492 230 --FG------------LEVSQIRVFGLPIRPSFVRAV---I-S--KDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMA 289 (462)
Q Consensus 230 --~g------------i~~~~i~v~g~pv~~~~~~~~---~-~--~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~ 289 (462)
.+ -...++.+++++|+...+.+. . . ...+|++++ ++++|+.+|+....|++..++++
T Consensus 200 ~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~---~~~vil~VgRl~~~Kgi~~ll~A 276 (482)
T 1uqt_A 200 NLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELK---NVQNIFSVERLDYSKGLPERFLA 276 (482)
T ss_dssp HHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTT---TCEEEEEECCBCGGGCHHHHHHH
T ss_pred HHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhC---CCEEEEEEeCCcccCCHHHHHHH
Confidence 11 123468899999997655421 1 1 456788886 45666666555556777777776
Q ss_pred HHHhhhcccCCCCC----ceEEEEccC----CH---HHHHHHhhc--------cC--CCCeEE-eccc--hhHHHHHHhc
Q 012492 290 LGESLLDKETGRPI----GQLIIICGR----NR---TLASTLQSE--------EW--KIPVKV-RGFE--TQMEKWMGAC 345 (462)
Q Consensus 290 l~~~l~~~~~~~~~----~~~lvv~G~----~~---~l~~~~~~~--------~~--~~~V~~-~g~~--~~~~~l~~~a 345 (462)
+...+.+ +|+ +.+++++++ ++ ++++.++++ +. ..+|.+ .|++ +++..+|+.|
T Consensus 277 ~~~ll~~----~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~A 352 (482)
T 1uqt_A 277 YEALLEK----YPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS 352 (482)
T ss_dssp HHHHHHH----CGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHC
T ss_pred HHHHHHh----CccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHc
Confidence 6443332 343 445555432 22 233333322 11 135775 4655 7899999999
Q ss_pred chheecCC----hhhHHHHHHhCC-----CEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHH
Q 012492 346 DCIITKAG----PGTIAEALIRGL-----PIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDEL 414 (462)
Q Consensus 346 D~vV~~sg----~~t~~EAla~G~-----PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~ 414 (462)
|++|.+|- +.+++|||+||+ |+|++...+..+ .+ + .|++++ |+++++++|.++|.++++.+
T Consensus 353 Dv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~-----~l-~--~g~lv~p~d~~~lA~ai~~lL~~~~~~r 424 (482)
T 1uqt_A 353 DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAAN-----EL-T--SALIVNPYDRDEVAAALDRALTMSLAER 424 (482)
T ss_dssp SEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGG-----TC-T--TSEEECTTCHHHHHHHHHHHHTCCHHHH
T ss_pred cEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHH-----Hh-C--CeEEECCCCHHHHHHHHHHHHcCCHHHH
Confidence 99999873 899999999998 899887643222 23 2 345554 89999999999995467889
Q ss_pred HHHHHHHHhhcCCcHHHHHHHHHHHHHhcc
Q 012492 415 KRMSENALKLAQPEAVVDIVKDIHDLAAQR 444 (462)
Q Consensus 415 ~~m~~~a~~~~~~~~~~~ia~~i~~l~~~~ 444 (462)
+++.+++++.+..++++..++.+.+.+++-
T Consensus 425 ~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 425 ISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 999999999888899999999999988765
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.4e-16 Score=138.47 Aligned_cols=150 Identities=14% Similarity=0.157 Sum_probs=111.3
Q ss_pred HHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccch
Q 012492 257 NLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFET 336 (462)
Q Consensus 257 ~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~ 336 (462)
++.+.+.-.++.+++++++|+.+.....+.+..+++.+.+ .+.++++++|.... + .+..+|++.||++
T Consensus 10 ~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~-----~~~~~~~~~g~~~~-----~--~~~~~v~~~~~~~ 77 (170)
T 2o6l_A 10 EMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQ-----IPQKVLWRFDGNKP-----D--TLGLNTRLYKWIP 77 (170)
T ss_dssp HHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTT-----SSSEEEEECCSSCC-----T--TCCTTEEEESSCC
T ss_pred HHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHh-----CCCeEEEEECCcCc-----c--cCCCcEEEecCCC
Confidence 3434333334557889999988743333444555555543 13577888776521 1 2456899999997
Q ss_pred hHHHHH--HhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCC
Q 012492 337 QMEKWM--GACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTK 410 (462)
Q Consensus 337 ~~~~l~--~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d 410 (462)
+ .+++ +.||++|+++|++|++||+++|+|+|++|...+ |..|+..+.+.|+|+.++ ++++++++|.+++ +|
T Consensus 78 ~-~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~-Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll-~~ 154 (170)
T 2o6l_A 78 Q-NDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFAD-QPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVI-ND 154 (170)
T ss_dssp H-HHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHH-HC
T ss_pred H-HHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhh-HHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHH-cC
Confidence 6 5778 899999999999999999999999999998644 467999999999999886 6889999999999 68
Q ss_pred HHHHHHHHHHH
Q 012492 411 TDELKRMSENA 421 (462)
Q Consensus 411 ~~~~~~m~~~a 421 (462)
++.++++.+.+
T Consensus 155 ~~~~~~a~~~~ 165 (170)
T 2o6l_A 155 PSYKENVMKLS 165 (170)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHH
Confidence 87666555443
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=99.68 E-value=4.3e-15 Score=152.43 Aligned_cols=156 Identities=15% Similarity=0.171 Sum_probs=111.6
Q ss_pred HHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH------HHHHHHhhccCCCCeEE
Q 012492 258 LRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR------TLASTLQSEEWKIPVKV 331 (462)
Q Consensus 258 ~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~------~l~~~~~~~~~~~~V~~ 331 (462)
..+.+.-.+++++|++++|+.+.....+ +.++++.|.+ .+.+++|++|.+. .+.+.+.+ ....|+.+
T Consensus 285 ~~~wld~~~~~~vv~vs~GS~~~~~~~~-~~~~~~~l~~-----~~~~~l~~~~~~~~~~~~~~l~~~~~~-~~~~~~~v 357 (482)
T 2pq6_A 285 CLDWLESKEPGSVVYVNFGSTTVMTPEQ-LLEFAWGLAN-----CKKSFLWIIRPDLVIGGSVIFSSEFTN-EIADRGLI 357 (482)
T ss_dssp HHHHHTTSCTTCEEEEECCSSSCCCHHH-HHHHHHHHHH-----TTCEEEEECCGGGSTTTGGGSCHHHHH-HHTTTEEE
T ss_pred HHHHHhcCCCCceEEEecCCcccCCHHH-HHHHHHHHHh-----cCCcEEEEEcCCccccccccCcHhHHH-hcCCCEEE
Confidence 3444443345678999999987644444 4555556643 2468899887541 02121111 12468999
Q ss_pred eccchhHHHHHHh--cchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHH-HCCceeeeC---CHHHHHHHHHH
Q 012492 332 RGFETQMEKWMGA--CDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVV-DNGAGVFTR---SPKETARIVTE 405 (462)
Q Consensus 332 ~g~~~~~~~l~~~--aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~-~~G~g~~~~---~~~~la~~i~~ 405 (462)
.+|.+++ ++|+. +++||+++|.+|++||+++|+|+|+.|...+| ..|+..++ +.|+|+.+. +.+++.++|.+
T Consensus 358 ~~~~pq~-~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ-~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ 435 (482)
T 2pq6_A 358 ASWCPQD-KVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQ-PTDCRFICNEWEIGMEIDTNVKREELAKLINE 435 (482)
T ss_dssp ESCCCHH-HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH-HHHHHHHHHTSCCEEECCSSCCHHHHHHHHHH
T ss_pred EeecCHH-HHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccch-HHHHHHHHHHhCEEEEECCCCCHHHHHHHHHH
Confidence 9999887 58865 55699999999999999999999999986554 56999997 689999886 68899999999
Q ss_pred HhcCCHHHHHHHHHHHHhh
Q 012492 406 WFSTKTDELKRMSENALKL 424 (462)
Q Consensus 406 ll~~d~~~~~~m~~~a~~~ 424 (462)
+| +|++ .++|+++++++
T Consensus 436 ll-~~~~-~~~~r~~a~~l 452 (482)
T 2pq6_A 436 VI-AGDK-GKKMKQKAMEL 452 (482)
T ss_dssp HH-TSHH-HHHHHHHHHHH
T ss_pred HH-cCCc-HHHHHHHHHHH
Confidence 99 6875 34455555444
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.64 E-value=8.3e-16 Score=134.14 Aligned_cols=152 Identities=16% Similarity=0.178 Sum_probs=103.6
Q ss_pred EEEEEeCCCCC-ccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH---HHHHHHhhccCCCCeEEeccc--hhHHHHHH
Q 012492 270 AVLLMGGGEGM-GPVKETAMALGESLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWKIPVKVRGFE--TQMEKWMG 343 (462)
Q Consensus 270 ~iLv~gG~~~~-~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~ 343 (462)
.++++.|+... ++...+++++ +.+.+ .+++++++ +|.+. .+.+.+++++. ++.+ |++ +++.++|+
T Consensus 3 ~~i~~~G~~~~~Kg~~~li~a~-~~l~~----~~~~~l~i-~G~g~~~~~~~~~~~~~~~--~v~~-g~~~~~~~~~~~~ 73 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSVLIKAV-ALSKY----KQDIVLLL-KGKGPDEKKIKLLAQKLGV--KAEF-GFVNSNELLEILK 73 (166)
T ss_dssp EEEEEESCCSTTTTHHHHHHHH-HTCTT----GGGEEEEE-ECCSTTHHHHHHHHHHHTC--EEEC-CCCCHHHHHHHHT
T ss_pred eEEEEEeccchhcCHHHHHHHH-HHhcc----CCCeEEEE-EeCCccHHHHHHHHHHcCC--eEEE-eecCHHHHHHHHH
Confidence 34455555554 5555555544 55643 36777655 45543 35555565555 7888 996 78999999
Q ss_pred hcchheecCC----hhhHHHHHHhCC-CEEEecCCCCccccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHH
Q 012492 344 ACDCIITKAG----PGTIAEALIRGL-PIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMS 418 (462)
Q Consensus 344 ~aD~vV~~sg----~~t~~EAla~G~-PvI~~~~~~~~~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~ 418 (462)
.||++|.+|. |.+++|||++|+ |+|+++..++... .+.+.+..+...++++++++|.+++ +|++.+++|+
T Consensus 74 ~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~i~~l~-~~~~~~~~~~ 148 (166)
T 3qhp_A 74 TCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQ----FALDERSLFEPNNAKDLSAKIDWWL-ENKLERERMQ 148 (166)
T ss_dssp TCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGG----GCSSGGGEECTTCHHHHHHHHHHHH-HCHHHHHHHH
T ss_pred hCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhh----hccCCceEEcCCCHHHHHHHHHHHH-hCHHHHHHHH
Confidence 9999998873 899999999998 9999554332211 2222334444468999999999999 6999999999
Q ss_pred HHHHhhcCCcHHHHHHH
Q 012492 419 ENALKLAQPEAVVDIVK 435 (462)
Q Consensus 419 ~~a~~~~~~~~~~~ia~ 435 (462)
++++++++.++|+++++
T Consensus 149 ~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 149 NEYAKSALNYTLENSVI 165 (166)
T ss_dssp HHHHHHHHHHC------
T ss_pred HHHHHHHHHCChhhhhc
Confidence 99999988889988875
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=3.9e-14 Score=143.22 Aligned_cols=165 Identities=15% Similarity=0.097 Sum_probs=117.3
Q ss_pred cEEEcCCCCChhhhcc-cCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH
Q 012492 236 QIRVFGLPIRPSFVRA-VISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR 314 (462)
Q Consensus 236 ~i~v~g~pv~~~~~~~-~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~ 314 (462)
++..+|.-. ...... ..+.++..+.++..+++++|++++|+.+..... .+.+++..|.+ .+.+++|++|...
T Consensus 241 ~v~~vGPl~-~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~-~~~el~~~l~~-----~~~~flw~~~~~~ 313 (454)
T 3hbf_A 241 LLLNVGPFN-LTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPH-ELTALAESLEE-----CGFPFIWSFRGDP 313 (454)
T ss_dssp CEEECCCHH-HHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHH-HHHHHHHHHHH-----HCCCEEEECCSCH
T ss_pred CEEEECCcc-cccccccccchHHHHHHHhcCCCCceEEEecCCCCcCCHH-HHHHHHHHHHh-----CCCeEEEEeCCcc
Confidence 678887422 111111 112344566666556778999999998865433 34556666643 2457899998764
Q ss_pred H--HHHHHhhccCCCCeEEeccchhHHHHHHhcc--hheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHC-Cc
Q 012492 315 T--LASTLQSEEWKIPVKVRGFETQMEKWMGACD--CIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDN-GA 389 (462)
Q Consensus 315 ~--l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD--~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~-G~ 389 (462)
. +.+...+ ....|+.+.+|.++ ..+++.++ +||+++|.+|++||+++|+|+|+.|...+ |..|+..+++. |+
T Consensus 314 ~~~lp~~~~~-~~~~~~~vv~w~Pq-~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~D-Q~~Na~~v~~~~g~ 390 (454)
T 3hbf_A 314 KEKLPKGFLE-RTKTKGKIVAWAPQ-VEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGD-QGLNTILTESVLEI 390 (454)
T ss_dssp HHHSCTTHHH-HTTTTEEEESSCCH-HHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHTTSCS
T ss_pred hhcCCHhHHh-hcCCceEEEeeCCH-HHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCccccc-HHHHHHHHHHhhCe
Confidence 1 1111111 13468999999987 48999999 89999999999999999999999998655 55699999985 99
Q ss_pred eeeeC----CHHHHHHHHHHHhcCCH
Q 012492 390 GVFTR----SPKETARIVTEWFSTKT 411 (462)
Q Consensus 390 g~~~~----~~~~la~~i~~ll~~d~ 411 (462)
|+.+. +.+++.++|.++| +++
T Consensus 391 Gv~l~~~~~~~~~l~~av~~ll-~~~ 415 (454)
T 3hbf_A 391 GVGVDNGVLTKESIKKALELTM-SSE 415 (454)
T ss_dssp EEECGGGSCCHHHHHHHHHHHH-SSH
T ss_pred eEEecCCCCCHHHHHHHHHHHH-CCC
Confidence 98875 4789999999999 565
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=8.9e-15 Score=142.57 Aligned_cols=236 Identities=15% Similarity=0.141 Sum_probs=156.8
Q ss_pred hhCCCEEEECCcccchHH--HHHHHHcCCCCCCeEEEEecCCCCC----C------cccccCCCcEEEEcCHHHHHHHHH
Q 012492 162 EYKPDIIISVHPLMQHIP--LWVLKWQGLQKKVIFVTVITDLNTC----H------PTWFHPRVNRCYCPSKEVAKRASY 229 (462)
Q Consensus 162 ~~kPDvVi~~~~~~~~~~--~~~~~~~~~~~~iP~v~~~~d~~~~----~------~~~~~~~~d~~i~~s~~~~~~l~~ 229 (462)
-.++|+||..+|...... ....++.+. .++|+|..+||..+. + ..|+++.+|.++++|+.+++.+.+
T Consensus 72 ~~~~DvIi~q~P~~~~~~~~~~~~~~lk~-~~~k~i~~ihDl~pl~~~~~~~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~ 150 (339)
T 3rhz_A 72 LRHGDVVIFQTPTWNTTEFDEKLMNKLKL-YDIKIVLFIHDVVPLMFSGNFYLMDRTIAYYNKADVVVAPSQKMIDKLRD 150 (339)
T ss_dssp CCTTCEEEEEECCSSCHHHHHHHHHHHTT-SSCEEEEEESCCHHHHCGGGGGGHHHHHHHHTTCSEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcchhhHHHHHHHHHHh-cCCEEEEEecccHHhhCccchhhHHHHHHHHHHCCEEEECCHHHHHHHHH
Confidence 346899999888653321 122232211 389999999997531 1 135578899999999999999999
Q ss_pred cCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEE
Q 012492 230 FGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIII 309 (462)
Q Consensus 230 ~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv 309 (462)
.|++..++.+.++.-.. .. .+ ...+.+. .++++.|+.+.. + .+..+ .+++++++
T Consensus 151 ~G~~~~ki~~~~~~~~~---~~-~~-------~~~~~~~-~~i~yaG~l~k~---~----~L~~l------~~~~~f~i- 204 (339)
T 3rhz_A 151 FGMNVSKTVVQGMWDHP---TQ-AP-------MFPAGLK-REIHFPGNPERF---S----FVKEW------KYDIPLKV- 204 (339)
T ss_dssp TTCCCSEEEECCSCCCC---CC-CC-------CCCCEEE-EEEEECSCTTTC---G----GGGGC------CCSSCEEE-
T ss_pred cCCCcCceeecCCCCcc---Cc-cc-------ccccCCC-cEEEEeCCcchh---h----HHHhC------CCCCeEEE-
Confidence 99987888777653111 00 00 1112223 456677777731 1 11222 25677554
Q ss_pred ccCCHHHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchhee-cCC----------hhhHHHHHHhCCCEEEecCCCCc
Q 012492 310 CGRNRTLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIIT-KAG----------PGTIAEALIRGLPIILNDYIPGQ 376 (462)
Q Consensus 310 ~G~~~~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~-~sg----------~~t~~EAla~G~PvI~~~~~~~~ 376 (462)
+|++.+. .+. ||+|.|++ +++..+|+.+|+.+. .++ |+.+.|+|++|+|||+.+..
T Consensus 205 vG~G~~~-------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~--- 273 (339)
T 3rhz_A 205 YTWQNVE-------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGI--- 273 (339)
T ss_dssp EESCCCC-------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTC---
T ss_pred EeCCccc-------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccCh---
Confidence 5666431 234 99999998 789999987776333 233 67799999999999998753
Q ss_pred cccchHHHHHCCceeeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcH-----HHHHHHHHHHH
Q 012492 377 EKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEA-----VVDIVKDIHDL 440 (462)
Q Consensus 377 ~~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~-----~~~ia~~i~~l 440 (462)
.+.+.+.+.++|+.+++.+++++++..+ +++.+++|++++++.++..+ ...+.+.+.++
T Consensus 274 --~~~~~v~~~~~G~~~~~~~e~~~~i~~l---~~~~~~~m~~na~~~a~~~~~~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 274 --ANQELIENNGLGWIVKDVEEAIMKVKNV---NEDEYIELVKNVRSFNPILRKGFFTRRLLTESVFQA 337 (339)
T ss_dssp --TTTHHHHHHTCEEEESSHHHHHHHHHHC---CHHHHHHHHHHHHHHTHHHHTTHHHHHHHHHHHHHH
T ss_pred --hHHHHHHhCCeEEEeCCHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 3566788889999999988888888874 35779999999988865433 33444444443
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=4.1e-14 Score=144.88 Aligned_cols=175 Identities=16% Similarity=0.144 Sum_probs=112.1
Q ss_pred CcEEEcCCCCChhhhc-ccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCC
Q 012492 235 SQIRVFGLPIRPSFVR-AVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRN 313 (462)
Q Consensus 235 ~~i~v~g~pv~~~~~~-~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~ 313 (462)
.++..+|......... .....+.+.+.+.-.+++++|++++|+.+.... +.+.++++.|.+ .+.+++|+++..
T Consensus 234 ~~v~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~-~~~~~~~~al~~-----~~~~~lw~~~~~ 307 (480)
T 2vch_A 234 PPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTC-EQLNELALGLAD-----SEQRFLWVIRSP 307 (480)
T ss_dssp CCEEECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCH-HHHHHHHHHHHH-----TTCEEEEEECCC
T ss_pred CcEEEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCH-HHHHHHHHHHHh-----cCCcEEEEECCc
Confidence 3688888543221100 001122344444333456889999999875443 444556666644 346788887753
Q ss_pred HHH----------HHHHhhccCCCC---------eEEeccchhHHHHHHhcc--hheecCChhhHHHHHHhCCCEEEecC
Q 012492 314 RTL----------ASTLQSEEWKIP---------VKVRGFETQMEKWMGACD--CIITKAGPGTIAEALIRGLPIILNDY 372 (462)
Q Consensus 314 ~~l----------~~~~~~~~~~~~---------V~~~g~~~~~~~l~~~aD--~vV~~sg~~t~~EAla~G~PvI~~~~ 372 (462)
... ...+.+ .+..+ +.+.+|.+++ ++|+.++ +||+++|.+|++||+++|+|+|+.|.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~-~lp~~~~~~~~~~g~~v~~w~Pq~-~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~ 385 (480)
T 2vch_A 308 SGIANSSYFDSHSQTDPLT-FLPPGFLERTKKRGFVIPFWAPQA-QVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPL 385 (480)
T ss_dssp CSSTTTTTTCC--CSCGGG-GSCTTHHHHTTTTEEEEESCCCHH-HHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred cccccccccccccccchhh-hcCHHHHHHhCCCeEEEeCccCHH-HHhCCCCcCeEEecccchhHHHHHHcCCCEEeccc
Confidence 200 000000 12222 4555699876 8998888 79999999999999999999999998
Q ss_pred CCCccccchHHH-HHCCceeeeC-------CHHHHHHHHHHHhcC---CHHHHHHHHH
Q 012492 373 IPGQEKGNVPYV-VDNGAGVFTR-------SPKETARIVTEWFST---KTDELKRMSE 419 (462)
Q Consensus 373 ~~~~~~~n~~~l-~~~G~g~~~~-------~~~~la~~i~~ll~~---d~~~~~~m~~ 419 (462)
..+| ..|+..+ .+.|+|+.+. +.+++.++|.++| + +++.|++..+
T Consensus 386 ~~DQ-~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl-~~~~~~~~r~~a~~ 441 (480)
T 2vch_A 386 YAEQ-KMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLM-EGEEGKGVRNKMKE 441 (480)
T ss_dssp STTH-HHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHH-TSTHHHHHHHHHHH
T ss_pred cccc-hHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHh-cCcchHHHHHHHHH
Confidence 6554 5699997 5889998763 4789999999999 5 4455544443
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=4.6e-13 Score=135.55 Aligned_cols=276 Identities=9% Similarity=0.006 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCC------Ccc-c------ccCCCc
Q 012492 148 MAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTC------HPT-W------FHPRVN 214 (462)
Q Consensus 148 ~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~------~~~-~------~~~~~d 214 (462)
.+..++.++.+.++...-|+|.++.+.....+.. .|..+ ++.++..++|-..+. .+. | ....+|
T Consensus 133 vN~~fA~~i~~~~~~~~~D~VwVhDYhL~llp~~-lR~~~--~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~D 209 (496)
T 3t5t_A 133 FTRDFADAILKSSAQSADPVYLVHDYQLVGVPAL-LREQR--PDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPAT 209 (496)
T ss_dssp HHHHHHHHHHHHTTTCSSCEEEEESGGGTTHHHH-HHHHC--TTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHhccCCCCEEEEeCccHhHHHHH-HHhhC--CCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCC
Confidence 4555666554433322357888877766665543 34333 477887777643321 111 1 113578
Q ss_pred EEEEcCHHHHHHHHH-----c-CCCC-------------CcEEEcCCCCChhhhcccC--ChHHHHHHcCCCCCCcEEEE
Q 012492 215 RCYCPSKEVAKRASY-----F-GLEV-------------SQIRVFGLPIRPSFVRAVI--SKDNLRLELQMDPILPAVLL 273 (462)
Q Consensus 215 ~~i~~s~~~~~~l~~-----~-gi~~-------------~~i~v~g~pv~~~~~~~~~--~~~~~r~~l~l~~~~~~iLv 273 (462)
.+...++...+.+.. . |++. .+|.+++++|++..+.+.. .+.++|++++ ++++||.
T Consensus 210 ligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~---~~~lIl~ 286 (496)
T 3t5t_A 210 TIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWAD---GHRLVVH 286 (496)
T ss_dssp EEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHT---TSEEEEE
T ss_pred EEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhC---CceEEEE
Confidence 999988877766533 2 3221 2567899999987665321 1256788886 4566777
Q ss_pred EeCCCCCccHHHHHHHHHHhhhcccCCCCCc---eEEEEcc----CCH---HHHHHHhhc----cC---CCCeEEeccc-
Q 012492 274 MGGGEGMGPVKETAMALGESLLDKETGRPIG---QLIIICG----RNR---TLASTLQSE----EW---KIPVKVRGFE- 335 (462)
Q Consensus 274 ~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~---~~lvv~G----~~~---~l~~~~~~~----~~---~~~V~~~g~~- 335 (462)
+|+....|++...++++ +.+.+ +|++ .++++++ ++. ++++.++++ +. ..+|.|.|.+
T Consensus 287 VgRLd~~KGi~~lL~Af-~ll~~----~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~ 361 (496)
T 3t5t_A 287 SGRTDPIKNAERAVRAF-VLAAR----GGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDND 361 (496)
T ss_dssp EEESSGGGCHHHHHHHH-HHHHH----TSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred cccCccccCHHHHHHHH-HHHHh----CcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCC
Confidence 77666678888888887 65554 4553 3555543 232 234444432 11 1179999885
Q ss_pred -hhHHHHHHhcchheecCC----hhhHHHHHHhC---CCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHH
Q 012492 336 -TQMEKWMGACDCIITKAG----PGTIAEALIRG---LPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTE 405 (462)
Q Consensus 336 -~~~~~l~~~aD~vV~~sg----~~t~~EAla~G---~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ 405 (462)
+++..+|+.||+++.+|- +.+++|||+|| .|+|++...+ .+..+.+ .|++++ |+++++++|.+
T Consensus 362 ~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG-----a~~~l~~--~allVnP~D~~~lA~AI~~ 434 (496)
T 3t5t_A 362 VNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCG-----AAEVLGE--YCRSVNPFDLVEQAEAISA 434 (496)
T ss_dssp HHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT-----THHHHGG--GSEEECTTBHHHHHHHHHH
T ss_pred HHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCC-----CHHHhCC--CEEEECCCCHHHHHHHHHH
Confidence 689999999999998873 89999999996 8899887643 3344533 345554 79999999999
Q ss_pred HhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Q 012492 406 WFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLA 441 (462)
Q Consensus 406 ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~ 441 (462)
+|.+.++.++++.++.++.+..+.+..-++.+++.+
T Consensus 435 aL~m~~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L 470 (496)
T 3t5t_A 435 ALAAGPRQRAEAAARRRDAARPWTLEAWVQAQLDGL 470 (496)
T ss_dssp HHHCCHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 996667888888899999998887766666655544
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.8e-13 Score=141.23 Aligned_cols=101 Identities=14% Similarity=0.175 Sum_probs=75.5
Q ss_pred hHHHHHHhcchheecC----ChhhHHHHHHhCCCEEEecCCCCccccchHHHHHC-------Cceeee-----CCHHHHH
Q 012492 337 QMEKWMGACDCIITKA----GPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDN-------GAGVFT-----RSPKETA 400 (462)
Q Consensus 337 ~~~~l~~~aD~vV~~s----g~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~-------G~g~~~-----~~~~~la 400 (462)
++.++|+.||++|.|| .|.+++|||+||+|+|+++.++. ...+.+. +.|+.+ .++++++
T Consensus 511 d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~-----~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~a 585 (725)
T 3nb0_A 511 DYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGF-----GSYMEDLIETNQAKDYGIYIVDRRFKAPDESV 585 (725)
T ss_dssp CHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHH-----HHHHHTTSCHHHHHHTTEEEECCSSSCHHHHH
T ss_pred HHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCCh-----hhhhhccccccCCCCceEEEeCCCCCCHHHHH
Confidence 5899999999999998 39999999999999999987432 1122221 245544 1355555
Q ss_pred HHH----HHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHh
Q 012492 401 RIV----TEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 401 ~~i----~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~ 442 (462)
++| ..++..+++.+++|++++++.++.++|+++++.++++.+
T Consensus 586 eaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye 631 (725)
T 3nb0_A 586 EQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQ 631 (725)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 444 444434788899999999999999999999998887553
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.57 E-value=2.5e-14 Score=126.43 Aligned_cols=148 Identities=14% Similarity=0.045 Sum_probs=104.3
Q ss_pred cCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH--HHHHHHh--hccCCCCeEEeccch-
Q 012492 262 LQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR--TLASTLQ--SEEWKIPVKVRGFET- 336 (462)
Q Consensus 262 l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~--~l~~~~~--~~~~~~~V~~~g~~~- 336 (462)
+++++++++++++|+....++...+++++ +.+ ++++++++++... .+.+.++ ++++.++|.+.|+++
T Consensus 17 ~~~~~~~~~i~~~G~~~~~Kg~~~li~a~-~~l-------~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~ 88 (177)
T 2f9f_A 17 FKFKCYGDFWLSVNRIYPEKRIELQLEVF-KKL-------QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSE 88 (177)
T ss_dssp CCCCCCCSCEEEECCSSGGGTHHHHHHHH-HHC-------TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCH
T ss_pred cccCCCCCEEEEEeccccccCHHHHHHHH-HhC-------CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCH
Confidence 45666777776666554455555555544 444 3567665543332 3666666 667888999999995
Q ss_pred -hHHHHHHhcchheecC----ChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeee-CCHHHHHHHHHHHhcCC
Q 012492 337 -QMEKWMGACDCIITKA----GPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFT-RSPKETARIVTEWFSTK 410 (462)
Q Consensus 337 -~~~~l~~~aD~vV~~s----g~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~-~~~~~la~~i~~ll~~d 410 (462)
++..+|+.||++|.++ .+.+++|||++|+|+|+++.+. ..+.+.+.+.|+++ .++++++++|.+++ +|
T Consensus 89 ~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~-----~~e~i~~~~~g~~~~~d~~~l~~~i~~l~-~~ 162 (177)
T 2f9f_A 89 EELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGG-----FKETVINEKTGYLVNADVNEIIDAMKKVS-KN 162 (177)
T ss_dssp HHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHH-----HHHHCCBTTTEEEECSCHHHHHHHHHHHH-HC
T ss_pred HHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCC-----HHHHhcCCCccEEeCCCHHHHHHHHHHHH-hC
Confidence 4999999999999865 3889999999999999998521 22233334466665 68999999999999 57
Q ss_pred HHH-HHHHHHHHHh
Q 012492 411 TDE-LKRMSENALK 423 (462)
Q Consensus 411 ~~~-~~~m~~~a~~ 423 (462)
++. ++++++++++
T Consensus 163 ~~~~~~~~~~~a~~ 176 (177)
T 2f9f_A 163 PDKFKKDCFRRAKE 176 (177)
T ss_dssp TTTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 765 6777766654
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=99.45 E-value=6e-14 Score=127.49 Aligned_cols=138 Identities=23% Similarity=0.223 Sum_probs=100.8
Q ss_pred cCCCCCCcEEEEEeCCCCCccHHHHHHHHH-----HhhhcccCCCCCceEEEEccCCHH-----HHHHHh--------h-
Q 012492 262 LQMDPILPAVLLMGGGEGMGPVKETAMALG-----ESLLDKETGRPIGQLIIICGRNRT-----LASTLQ--------S- 322 (462)
Q Consensus 262 l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~-----~~l~~~~~~~~~~~~lvv~G~~~~-----l~~~~~--------~- 322 (462)
++.++++++|||++|+.. .+++++..++ +.|.+ ...+++++.+|.+.. +...+. .
T Consensus 22 ~~~~~~~~~VlVtgGS~~--~~n~li~~vl~~~~l~~L~~----~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~ 95 (224)
T 2jzc_A 22 LEGIIEEKALFVTCGATV--PFPKLVSCVLSDEFCQELIQ----YGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPI 95 (224)
T ss_dssp --CCCCSCCEEEECCSCC--SCHHHHHHHTSHHHHHHHHT----TTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSS
T ss_pred cCCCCCCCEEEEEcCCch--HHHHHHHHHHHHHHHHHHhc----CCCeEEEEEECCCchhhHHHHHHhhhcccccccccc
Confidence 556667889999999974 3555555442 55543 122678888998642 112220 0
Q ss_pred --------------ccCCCCeEEeccchhHHHHHH-hcchheecCChhhHHHHHHhCCCEEEecCC---CCccccchHHH
Q 012492 323 --------------EEWKIPVKVRGFETQMEKWMG-ACDCIITKAGPGTIAEALIRGLPIILNDYI---PGQEKGNVPYV 384 (462)
Q Consensus 323 --------------~~~~~~V~~~g~~~~~~~l~~-~aD~vV~~sg~~t~~EAla~G~PvI~~~~~---~~~~~~n~~~l 384 (462)
.....++...+|.++|.++|+ .||++|+++|.+|++|++++|+|+|+.|.+ .++|..|++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l 175 (224)
T 2jzc_A 96 DQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF 175 (224)
T ss_dssp CTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH
T ss_pred ccccccccccccccccCCceEEEeeccchHHHHHHhcCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH
Confidence 001225677899999999999 999999999999999999999999999985 35678899999
Q ss_pred HHCCceeeeCCHHHHHHHHHHH
Q 012492 385 VDNGAGVFTRSPKETARIVTEW 406 (462)
Q Consensus 385 ~~~G~g~~~~~~~~la~~i~~l 406 (462)
.+.|+++.+ +++.+.++|.++
T Consensus 176 ~~~G~~~~~-~~~~L~~~i~~l 196 (224)
T 2jzc_A 176 VELGYVWSC-APTETGLIAGLR 196 (224)
T ss_dssp HHHSCCCEE-CSCTTTHHHHHH
T ss_pred HHCCCEEEc-CHHHHHHHHHHH
Confidence 999998766 667787878776
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.13 E-value=3.4e-09 Score=109.05 Aligned_cols=270 Identities=7% Similarity=-0.035 Sum_probs=158.5
Q ss_pred HHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccccCCCcEEEEcCHHHHHHHHHcCC
Q 012492 153 AKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGL 232 (462)
Q Consensus 153 ~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~~~~d~~i~~s~~~~~~l~~~gi 232 (462)
...+.+.+++.++||+|--...+......++.. .-.|+-.....+.. .--.+..|++++-.... . .+..+
T Consensus 338 ~~~ia~~Ir~d~IDILVdL~g~t~~~~i~~aa~----RpAPVQvs~lGyp~---TTGl~~iDY~i~D~~~~-~--~~~~y 407 (631)
T 3q3e_A 338 LEFIRSVCESNGAAIFYMPSIGMDMTTIFASNT----RLAPIQAIALGHPA---TTHSDFIEYVIVEDDYV-G--SEECF 407 (631)
T ss_dssp HHHHHHHHHHHTCSEEEESCCSSSHHHHHHTTS----CCSSEEEEECSSCS---CCCCTTCCEEEEEGGGC-C--CGGGC
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCchhHHHHhC----CCchheEeccCCCc---ccCcccCCEEEeCCCCC-C--cccCc
Confidence 345668899999999987666555544444322 25676433322210 11134568777532110 0 01122
Q ss_pred CCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCC-CcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEE-Ec
Q 012492 233 EVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPI-LPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLII-IC 310 (462)
Q Consensus 233 ~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~-~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lv-v~ 310 (462)
.+++..++...-. + .+.... -.+..++++.+ ..+++..... ..|...+.+...++.+.+ .|+..+++ ..
T Consensus 408 -sEklirLP~~~~~-~-~p~~~~-p~r~~~~lp~~~G~v~Fg~fn~-~~Ki~p~~l~~WarIL~~----vP~s~L~l~~~ 478 (631)
T 3q3e_A 408 -SETLLRLPKDALP-Y-VPSALA-PEKVDYLLRENPEVVNIGIAST-TMKLNPYFLEALKAIRDR----AKVKVHFHFAL 478 (631)
T ss_dssp -SSEEEEECTTSSC-C-CCCTTC-CSSCCCCCCSCCSEEEEEEEEC-STTCCHHHHHHHHHHHHH----CSSEEEEEEEE
T ss_pred -eeeEEECCCCccc-c-CCcccC-CccccccCCcCCCeEEEEECCc-cccCCHHHHHHHHHHHHh----CCCcEEEEEec
Confidence 2567666642111 1 110000 01234677654 2333333322 345556666655555543 36644322 34
Q ss_pred cCC----HHHHHHHhhccCCCCeEEeccc--hhHHHHHHhcchheec---CChhhHHHHHHhCCCEEEecCCCCccccch
Q 012492 311 GRN----RTLASTLQSEEWKIPVKVRGFE--TQMEKWMGACDCIITK---AGPGTIAEALIRGLPIILNDYIPGQEKGNV 381 (462)
Q Consensus 311 G~~----~~l~~~~~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~---sg~~t~~EAla~G~PvI~~~~~~~~~~~n~ 381 (462)
|.. ..+.+...+.++.+++.|.|.. .+...+|+.||+++-+ +||+|++|||++|+|||+.+.........+
T Consensus 479 g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvga 558 (631)
T 3q3e_A 479 GQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDE 558 (631)
T ss_dssp SSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHH
T ss_pred CCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHH
Confidence 532 2344445556777899999987 4566888999999965 368999999999999999875432223334
Q ss_pred HHHHHCCce--eeeCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC-----cHHHHHHHHHHHHHh
Q 012492 382 PYVVDNGAG--VFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQP-----EAVVDIVKDIHDLAA 442 (462)
Q Consensus 382 ~~l~~~G~g--~~~~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~-----~~~~~ia~~i~~l~~ 442 (462)
..+...|.. .+..+.++.++...+|. +|++.+++|+++.++.... ....++.+.++++++
T Consensus 559 SlL~~~GLpE~LIA~d~eeYv~~Av~La-~D~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~ 625 (631)
T 3q3e_A 559 GLFKRLGLPEWLIANTVDEYVERAVRLA-ENHQERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLN 625 (631)
T ss_dssp HHHHHTTCCGGGEESSHHHHHHHHHHHH-HCHHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHH
T ss_pred HHHHhcCCCcceecCCHHHHHHHHHHHh-CCHHHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHH
Confidence 556777874 36788999999999999 7999999999998776432 123455555555443
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=98.56 E-value=8.3e-07 Score=86.43 Aligned_cols=113 Identities=14% Similarity=0.110 Sum_probs=67.1
Q ss_pred hHHHHHHcCCCCCCcEEEEEeCC-CCC-ccH-HHHHHHHHHhhhcccCCCCCceEEEEccCCH-HHHHHHhhc-c--CCC
Q 012492 255 KDNLRLELQMDPILPAVLLMGGG-EGM-GPV-KETAMALGESLLDKETGRPIGQLIIICGRNR-TLASTLQSE-E--WKI 327 (462)
Q Consensus 255 ~~~~r~~l~l~~~~~~iLv~gG~-~~~-~~~-~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~-~l~~~~~~~-~--~~~ 327 (462)
.+..++.++++.++++|++..|+ .+. +.. .+.+.++++.|.+ . ++++++++|..+ +..+.+.+. + ...
T Consensus 167 ~~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~----~-~~~vvl~g~~~e~~~~~~i~~~~~~~~~~ 241 (348)
T 1psw_A 167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID----E-GYQVVLFGSAKDHEAGNEILAALNTEQQA 241 (348)
T ss_dssp HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH----T-TCEEEECCCGGGHHHHHHHHTTSCHHHHT
T ss_pred HHHHHHHhCCCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHH----C-CCeEEEEeChhhHHHHHHHHHhhhhcccc
Confidence 44566778887667777777666 332 221 2344456666654 1 466665544433 122333321 1 012
Q ss_pred Ce-EEeccc--hhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCC
Q 012492 328 PV-KVRGFE--TQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYI 373 (462)
Q Consensus 328 ~V-~~~g~~--~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~ 373 (462)
++ .+.|.. .++..+++.||++|+...|. +..|.++|+|+|+.-.+
T Consensus 242 ~~~~l~g~~sl~e~~ali~~a~l~I~~Dsg~-~HlAaa~g~P~v~lfg~ 289 (348)
T 1psw_A 242 WCRNLAGETQLDQAVILIAACKAIVTNDSGL-MHVAAALNRPLVALYGP 289 (348)
T ss_dssp TEEECTTTSCHHHHHHHHHTSSEEEEESSHH-HHHHHHTTCCEEEEESS
T ss_pred ceEeccCcCCHHHHHHHHHhCCEEEecCCHH-HHHHHHcCCCEEEEECC
Confidence 34 456654 68999999999999984433 33499999999987543
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=98.56 E-value=3.3e-05 Score=75.28 Aligned_cols=266 Identities=12% Similarity=0.078 Sum_probs=132.2
Q ss_pred CCCeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCC--CchhhHHHHHHHHhhhHHHHHHhhcCCcc
Q 012492 61 RTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGW--PLNDMERSYKFMVKHVQLWKVAFHSTSPK 138 (462)
Q Consensus 61 ~~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~--~~~~~~~~y~~~~~~~~l~~~~~~~~~~~ 138 (462)
.+|||||+..+. .|..-.+..+.++|++++|+....+++.-. ..+. ....+++ .+ .+. .+
T Consensus 7 ~~~~iLvi~~~~-lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~--~~~l~~~~p~vd~----------vi--~~~---~~ 68 (349)
T 3tov_A 7 DYKRIVVTFLMH-LGDVILTTPFLEVLRKAAPHSHITYVIDEK--LQQVMEYNPNIDE----------LI--VVD---KK 68 (349)
T ss_dssp TTCEEEEECCCC-HHHHHTTHHHHHHHHHHCTTSEEEEEEEGG--GGGGTSSCTTCSE----------EE--EEC---CS
T ss_pred CCCEEEEEecCc-ccHHHHHHHHHHHHHHHCCCCEEEEEECcc--hhHHHhcCCCccE----------EE--EeC---cc
Confidence 468999998764 799999999999999998765444444211 0000 0000000 00 001 01
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhCC-CEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccccCCCcEEE
Q 012492 139 WIHSCYLAAMAAYYAKEVEAGLMEYKP-DIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWFHPRVNRCY 217 (462)
Q Consensus 139 ~~~~~~~~~~~~~~~~~l~~~l~~~kP-DvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~~~~~d~~i 217 (462)
... .......++.+.+++.++ |++|..+..... ..+++.. ++|...-... . ...++ .+..+
T Consensus 69 ~~~------~~~~~~~~l~~~Lr~~~y~D~vidl~~~~rs--~~l~~~~----~a~~riG~~~-~--~~~~~---~~~~~ 130 (349)
T 3tov_A 69 GRH------NSISGLNEVAREINAKGKTDIVINLHPNERT--SYLAWKI----HAPITTGMSH-F--LFRPF---MTKYT 130 (349)
T ss_dssp SHH------HHHHHHHHHHHHHHHHCCCCEEEECCCSHHH--HHHHHHH----CCSEEEECCC-T--TTGGG---CSEEC
T ss_pred ccc------ccHHHHHHHHHHHhhCCCCeEEEECCCChHH--HHHHHHh----CCCeEEecCC-C--Ccccc---ccccc
Confidence 100 011223355667889999 999988765322 2233332 4554321111 0 01111 11111
Q ss_pred Ec----CHH---HHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCC-CCccH-HHHHH
Q 012492 218 CP----SKE---VAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGE-GMGPV-KETAM 288 (462)
Q Consensus 218 ~~----s~~---~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~-~~~~~-~~~l~ 288 (462)
.. .+. ..+.+...|++...-.....++.++.. ...+.+..++|+++++++|++..|+. ..+.. .+.+.
T Consensus 131 ~~~~~~~h~v~r~~~ll~~lg~~~~~~~~~~l~~~~~~~---~~~~~~l~~~g~~~~~~~i~i~pga~~~~k~wp~~~~~ 207 (349)
T 3tov_A 131 RLDRKTRHAADMYINVLEQLGVTDTSNSGLHIEICEEWR---CQAQEFYSSHGLTDTDILIGFNIGSAVPEKRWPAERFA 207 (349)
T ss_dssp CCCTTTSCHHHHHHHHHHHTTCCCCCCCCCCCCCCHHHH---HHHHHHHHHTTCCTTCCEEEEECCCSSGGGCCCHHHHH
T ss_pred cCCCCCccHHHHHHHHHHHhCCCccCCCceeeeCCHHHH---HHHHHHHHHcCCCCCCCEEEEeCCCCCccCCCCHHHHH
Confidence 10 111 122223356642100000001111100 01123344567877778887765553 33322 34455
Q ss_pred HHHHhhhcccCCCCCceEEEEccCCH-HHHHHHhh-ccCCCCeEEeccc--hhHHHHHHhcchheec-CChhhHHHHHHh
Q 012492 289 ALGESLLDKETGRPIGQLIIICGRNR-TLASTLQS-EEWKIPVKVRGFE--TQMEKWMGACDCIITK-AGPGTIAEALIR 363 (462)
Q Consensus 289 ~l~~~l~~~~~~~~~~~~lvv~G~~~-~l~~~~~~-~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~-sg~~t~~EAla~ 363 (462)
++++.|.+. ++++++++|+.+ ++.+.+.+ .+ ...+.+.|.. .++..+++.||++|+. ||++.+ |.++
T Consensus 208 ~l~~~l~~~-----g~~vvl~g~~~e~~~~~~i~~~~~-~~~~~l~g~~sl~e~~ali~~a~~~i~~DsG~~Hl--Aaa~ 279 (349)
T 3tov_A 208 HVADYFGRL-----GYKTVFFGGPMDLEMVQPVVEQME-TKPIVATGKFQLGPLAAAMNRCNLLITNDSGPMHV--GISQ 279 (349)
T ss_dssp HHHHHHHHH-----TCEEEECCCTTTHHHHHHHHHTCS-SCCEECTTCCCHHHHHHHHHTCSEEEEESSHHHHH--HHTT
T ss_pred HHHHHHHhC-----CCeEEEEeCcchHHHHHHHHHhcc-cccEEeeCCCCHHHHHHHHHhCCEEEECCCCHHHH--HHhc
Confidence 566666542 456665444443 23333322 22 2234555643 6899999999999997 555444 8999
Q ss_pred CCCEEEecCC
Q 012492 364 GLPIILNDYI 373 (462)
Q Consensus 364 G~PvI~~~~~ 373 (462)
|+|+|+.-.+
T Consensus 280 g~P~v~lfg~ 289 (349)
T 3tov_A 280 GVPIVALYGP 289 (349)
T ss_dssp TCCEEEECSS
T ss_pred CCCEEEEECC
Confidence 9999997543
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=4.5e-06 Score=89.26 Aligned_cols=176 Identities=12% Similarity=0.007 Sum_probs=115.6
Q ss_pred HHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCH---HHHHHHhhccCC-CCeEEecc
Q 012492 259 RLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNR---TLASTLQSEEWK-IPVKVRGF 334 (462)
Q Consensus 259 r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~---~l~~~~~~~~~~-~~V~~~g~ 334 (462)
|..+||+++.. ++... ....|-..+.+....+.|++ .|+.++++...... .+++..++.|+. ++|.|.+.
T Consensus 514 R~~~gLp~~~v-~f~~f-N~~~Ki~p~~~~~W~~IL~~----vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~ 587 (723)
T 4gyw_A 514 RSQYGLPEDAI-VYCNF-NQLYKIDPSTLQMWANILKR----VPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPV 587 (723)
T ss_dssp GGGGTCCTTSE-EEECC-SCGGGCCHHHHHHHHHHHHH----CSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred hhhcCCCCCCE-EEEeC-CccccCCHHHHHHHHHHHHh----CCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCC
Confidence 56789987653 22222 22234445555555555554 47766554433322 255556666653 67999887
Q ss_pred c--hhHHHHHHhcchheec---CChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCce-eeeCCHHHHHHHHHHHhc
Q 012492 335 E--TQMEKWMGACDCIITK---AGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAG-VFTRSPKETARIVTEWFS 408 (462)
Q Consensus 335 ~--~~~~~l~~~aD~vV~~---sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g-~~~~~~~~la~~i~~ll~ 408 (462)
. ++.-..|+.+|+++=+ +|++|.+||+.+|+|||..+.........+..+...|.. +++.+.++..+...+|.
T Consensus 588 ~~~~~~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~~~~~Y~~~a~~la- 666 (723)
T 4gyw_A 588 APKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKLG- 666 (723)
T ss_dssp CCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCSSHHHHHHHHHHHH-
T ss_pred CCHHHHHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccCCHHHHHHHHHHHh-
Confidence 6 3555677889998832 468999999999999999875433334455667777864 56678999999999998
Q ss_pred CCHHHHHHHHHHHHhhc---CCcHHHHHHHHHHHHH
Q 012492 409 TKTDELKRMSENALKLA---QPEAVVDIVKDIHDLA 441 (462)
Q Consensus 409 ~d~~~~~~m~~~a~~~~---~~~~~~~ia~~i~~l~ 441 (462)
+|++.+.++++..++.. .-+.....++.+++.+
T Consensus 667 ~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~ 702 (723)
T 4gyw_A 667 TDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLY 702 (723)
T ss_dssp HCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHH
Confidence 79998888887765432 2356666666666654
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=1e-05 Score=86.91 Aligned_cols=223 Identities=12% Similarity=0.056 Sum_probs=138.4
Q ss_pred CcEEEEcCHHHHHHHHHc-CCCCCcEEEcCCCCChhhhcccC---ChHHHHHHcCCCCCCcEEEEEeCCCCCc-------
Q 012492 213 VNRCYCPSKEVAKRASYF-GLEVSQIRVFGLPIRPSFVRAVI---SKDNLRLELQMDPILPAVLLMGGGEGMG------- 281 (462)
Q Consensus 213 ~d~~i~~s~~~~~~l~~~-gi~~~~i~v~g~pv~~~~~~~~~---~~~~~r~~l~l~~~~~~iLv~gG~~~~~------- 281 (462)
.|.++++++...+.+.+. ++++.++..+|.|-.+.++.... .++.+++++++++++++||....-.+..
T Consensus 479 ~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~kk~ILyaPT~r~~~~~~~~~~ 558 (729)
T 3l7i_A 479 WDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFVSKGKY 558 (729)
T ss_dssp CSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCCGGGSS
T ss_pred CCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCchHHHhcccchHHHHHHHHHHhCCCCCCeEEEEeeeeeCCcccccccc
Confidence 588999999988877664 78778899999997766653211 2456888999998899888875322210
Q ss_pred --cHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecCChhhHHH
Q 012492 282 --PVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAE 359 (462)
Q Consensus 282 --~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~E 359 (462)
.....+..+.+.+. .++.+ +.-..+.....+...+....+.......++.++|..||++|+- .+.++.|
T Consensus 559 ~~~~~~~~~~l~~~l~------~~~~l--i~r~Hp~~~~~~~~~~~~~~~~~~~~~~di~~ll~~aD~lITD-ySSv~fD 629 (729)
T 3l7i_A 559 LFELKIDLDNLYKELG------DDYVI--LLRMHYLISNALDLSGYENFAIDVSNYNDVSELFLISDCLITD-YSSVMFD 629 (729)
T ss_dssp CCCCTTCHHHHHHHHT------TTEEE--EECCCHHHHTTCCCTTCTTTEEECTTCSCHHHHHHTCSEEEES-SCTHHHH
T ss_pred ccchhhHHHHHHHHcC------CCeEE--EEecCcchhccccccccCCcEEeCCCCcCHHHHHHHhCEEEee-chHHHHh
Confidence 01112334444442 24433 3343432222221112334454444446899999999999996 3468899
Q ss_pred HHHhCCCEEEecCCCCccccc----hHHHHHCCceeeeCCHHHHHHHHHHHhcCC---HHHHHHHHHHHHhhcCCcHHHH
Q 012492 360 ALIRGLPIILNDYIPGQEKGN----VPYVVDNGAGVFTRSPKETARIVTEWFSTK---TDELKRMSENALKLAQPEAVVD 432 (462)
Q Consensus 360 Ala~G~PvI~~~~~~~~~~~n----~~~l~~~G~g~~~~~~~~la~~i~~ll~~d---~~~~~~m~~~a~~~~~~~~~~~ 432 (462)
.+.+++|+|.....-.+...+ .-.+.+.-.|..+.+.+++.++|......+ .+.++++.+..-.+.+..++++
T Consensus 630 ~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~~~~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~dg~as~r 709 (729)
T 3l7i_A 630 YGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPIYTEPYGLAKELKNLDKVQQQYQEKIDAFYDRFCSVDNGKASQY 709 (729)
T ss_dssp HGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCEESSHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTTCCSCHHHH
T ss_pred HHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCeECCHHHHHHHHhhhhccchhHHHHHHHHHHHhCCccCChHHHH
Confidence 999999999986532111100 001112233567788999999888765212 2334444444444556789999
Q ss_pred HHHHHHHHHhcc
Q 012492 433 IVKDIHDLAAQR 444 (462)
Q Consensus 433 ia~~i~~l~~~~ 444 (462)
|++.|.+.....
T Consensus 710 i~~~i~~~~~~~ 721 (729)
T 3l7i_A 710 IGDLIHKDIKEQ 721 (729)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHhcCcCc
Confidence 999999877644
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=0.00012 Score=70.51 Aligned_cols=97 Identities=12% Similarity=-0.009 Sum_probs=58.0
Q ss_pred CCcEEEEEeCCCCC-cc-HHHHHHHHHHhhhcccCCCCCceEEEEccCCHH--HHHHHhhccCCCCeEEeccc--hhHHH
Q 012492 267 ILPAVLLMGGGEGM-GP-VKETAMALGESLLDKETGRPIGQLIIICGRNRT--LASTLQSEEWKIPVKVRGFE--TQMEK 340 (462)
Q Consensus 267 ~~~~iLv~gG~~~~-~~-~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~--l~~~~~~~~~~~~V~~~g~~--~~~~~ 340 (462)
++++|++..|+... +. -.+.+.++++.|.+ .+++++++.|...+ +.+.+.+. ..++.+.|.. .++..
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~-----~~~~vvl~~g~~~e~~~~~~i~~~--~~~~~l~g~~sl~el~a 249 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLAD-----SGIRIKLPWGAPHEEERAKRLAEG--FAYVEVLPKMSLEGVAR 249 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTT-----TCCEEEECCSSHHHHHHHHHHHTT--CTTEEECCCCCHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHH-----CCCcEEEecCCHHHHHHHHHHHhh--CCcccccCCCCHHHHHH
Confidence 45666665554432 22 12345556666653 25665554454322 22333321 1346666653 68999
Q ss_pred HHHhcchheec-CChhhHHHHHHhCCCEEEecC
Q 012492 341 WMGACDCIITK-AGPGTIAEALIRGLPIILNDY 372 (462)
Q Consensus 341 l~~~aD~vV~~-sg~~t~~EAla~G~PvI~~~~ 372 (462)
+++.||++|+. ||++.+ |.++|+|+|+.-.
T Consensus 250 li~~a~l~I~~DSG~~Hl--Aaa~g~P~v~lfg 280 (326)
T 2gt1_A 250 VLAGAKFVVSVDTGLSHL--TAALDRPNITVYG 280 (326)
T ss_dssp HHHTCSEEEEESSHHHHH--HHHTTCCEEEEES
T ss_pred HHHhCCEEEecCCcHHHH--HHHcCCCEEEEEC
Confidence 99999999998 565544 6779999998753
|
| >1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1 | Back alignment and structure |
|---|
Probab=90.38 E-value=2.8 Score=36.45 Aligned_cols=67 Identities=19% Similarity=0.219 Sum_probs=41.4
Q ss_pred HHHHHhcchhee-cCChhhH---HHHHHhCCCEEEecCCCCccccchHHHHHCC---------ceeeeCCHHHHHHHHHH
Q 012492 339 EKWMGACDCIIT-KAGPGTI---AEALIRGLPIILNDYIPGQEKGNVPYVVDNG---------AGVFTRSPKETARIVTE 405 (462)
Q Consensus 339 ~~l~~~aD~vV~-~sg~~t~---~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G---------~g~~~~~~~~la~~i~~ 405 (462)
.-+...||++|. ++|.+|+ .||+..++|+++.+..+.... -...+.+.| ...++++++++.+.|.+
T Consensus 113 ~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~~g~w~~-~l~~~~~~G~fi~~~~~~~i~~~~~~ee~~~~l~~ 191 (195)
T 1rcu_A 113 FVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRGTGGWTD-RISQVLIDGKYLDNRRIVEIHQAWTVEEAVQIIEQ 191 (195)
T ss_dssp HHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETTSCHHHH-HGGGGCBTTTBSSTTCCSCEEEESSHHHHHHHHHT
T ss_pred HHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECCCCccHH-HHHHHHHcCCcCCHHHcCeEEEeCCHHHHHHHHHH
Confidence 356678998664 5555664 568889999999975432211 011222233 34566788888877765
Q ss_pred H
Q 012492 406 W 406 (462)
Q Consensus 406 l 406 (462)
+
T Consensus 192 ~ 192 (195)
T 1rcu_A 192 I 192 (195)
T ss_dssp C
T ss_pred H
Confidence 4
|
| >3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M} | Back alignment and structure |
|---|
Probab=88.74 E-value=4.3 Score=35.06 Aligned_cols=37 Identities=24% Similarity=0.309 Sum_probs=26.3
Q ss_pred hHHHHHHhcchhee-cCChhhHHHHH---H------hCCCEEEecCC
Q 012492 337 QMEKWMGACDCIIT-KAGPGTIAEAL---I------RGLPIILNDYI 373 (462)
Q Consensus 337 ~~~~l~~~aD~vV~-~sg~~t~~EAl---a------~G~PvI~~~~~ 373 (462)
.-..++..||++|. ++|.+|+-|.. . .++|+++.+..
T Consensus 101 Rk~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~~ 147 (189)
T 3sbx_A 101 RKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPW 147 (189)
T ss_dssp HHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTT
T ss_pred HHHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecCC
Confidence 33467789998775 55678876644 2 38999999864
|
| >2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A | Back alignment and structure |
|---|
Probab=88.59 E-value=0.88 Score=38.98 Aligned_cols=64 Identities=17% Similarity=0.175 Sum_probs=42.1
Q ss_pred HHHHhcchhe-ecCChhhH---HHHHHhCCCEEEecCCCCccccchHHHHH--CCceeeeCCHHHHHHHHHHHh
Q 012492 340 KWMGACDCII-TKAGPGTI---AEALIRGLPIILNDYIPGQEKGNVPYVVD--NGAGVFTRSPKETARIVTEWF 407 (462)
Q Consensus 340 ~l~~~aD~vV-~~sg~~t~---~EAla~G~PvI~~~~~~~~~~~n~~~l~~--~G~g~~~~~~~~la~~i~~ll 407 (462)
-+...||.+| .++|.+|+ .|++..++|+++.+.. + ....++.+ .....++++++++.+.+.+++
T Consensus 103 ~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~-~---~~~gfi~~~~~~~i~~~~~~~e~~~~l~~~~ 172 (176)
T 2iz6_A 103 INALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ-P---EAEKFFTSLDAGLVHVAADVAGAIAAVKQLL 172 (176)
T ss_dssp CCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC-H---HHHHHHHHHCTTTEEEESSHHHHHHHHHHHH
T ss_pred HHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc-c---cccccCChhhcCeEEEcCCHHHHHHHHHHHH
Confidence 3556789866 45566664 5577899999999862 1 11112222 234567788999988888876
|
| >3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=86.96 E-value=2.1 Score=36.04 Aligned_cols=68 Identities=18% Similarity=0.225 Sum_probs=43.5
Q ss_pred HHHHhcchhee--cC---ChhhHHH---HHHhCCCEEEecCCC-CccccchHHHH------HC--------------Cce
Q 012492 340 KWMGACDCIIT--KA---GPGTIAE---ALIRGLPIILNDYIP-GQEKGNVPYVV------DN--------------GAG 390 (462)
Q Consensus 340 ~l~~~aD~vV~--~s---g~~t~~E---Ala~G~PvI~~~~~~-~~~~~n~~~l~------~~--------------G~g 390 (462)
+.+..||++|. .+ ..+|..| |.+.|+||++..... .....|...+. ++ ..|
T Consensus 65 ~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~~~D~R~~g~~~~~~~~~~~~~~e~~f~~~N~~~~G~i~~~g 144 (162)
T 3ehd_A 65 ENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALYTDSRQQGADNHQKLDALNEIAENQFHYLNLYTVGLIKLNG 144 (162)
T ss_dssp HHHHTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEECCCGGGCCTTCHHHHHHTTSTTCCCSCCCCHHHHHHHHTTE
T ss_pred HHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEcCcccccCCcchhhhhhHHHhhhhhhhhhHHHhhhHHhCC
Confidence 67999999886 22 3678888 789999999986531 00011111110 00 156
Q ss_pred eeeCCHHHHHHHHHHHh
Q 012492 391 VFTRSPKETARIVTEWF 407 (462)
Q Consensus 391 ~~~~~~~~la~~i~~ll 407 (462)
.++.+.+++.+.|.+.|
T Consensus 145 ~~~~~~~~~~~~l~~~~ 161 (162)
T 3ehd_A 145 RVVSSEEDLLEEIKQRL 161 (162)
T ss_dssp EEESSHHHHHHHHHHTC
T ss_pred eEEeCHHHHHHHHHHHh
Confidence 77888888888887755
|
| >1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A | Back alignment and structure |
|---|
Probab=86.39 E-value=6.1 Score=34.88 Aligned_cols=69 Identities=20% Similarity=0.133 Sum_probs=42.4
Q ss_pred HHHHHhcchhee-cCChhhHHHHH---------HhCCCEEEecCCCCcc-ccc-hHHHHHCCc--------eeeeCCHHH
Q 012492 339 EKWMGACDCIIT-KAGPGTIAEAL---------IRGLPIILNDYIPGQE-KGN-VPYVVDNGA--------GVFTRSPKE 398 (462)
Q Consensus 339 ~~l~~~aD~vV~-~sg~~t~~EAl---------a~G~PvI~~~~~~~~~-~~n-~~~l~~~G~--------g~~~~~~~~ 398 (462)
..++..||++|. ++|.+|+-|.. ..++|+++.+..+... ..+ .+.+++.|. ..+++++++
T Consensus 100 ~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~~~~~~~~~~d~~ee 179 (216)
T 1ydh_A 100 AAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKE 179 (216)
T ss_dssp HHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTSSCHHHHTTEEEESSHHH
T ss_pred HHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCChHHcCeEEEeCCHHH
Confidence 356778998765 66678876654 3589999998532111 100 123444443 356788888
Q ss_pred HHHHHHHHh
Q 012492 399 TARIVTEWF 407 (462)
Q Consensus 399 la~~i~~ll 407 (462)
+.+.+.+..
T Consensus 180 ~~~~l~~~~ 188 (216)
T 1ydh_A 180 LMEKMEEYT 188 (216)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHHhc
Confidence 888887643
|
| >1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1 | Back alignment and structure |
|---|
Probab=86.22 E-value=5.2 Score=34.58 Aligned_cols=67 Identities=24% Similarity=0.218 Sum_probs=38.9
Q ss_pred HHHHHHhcchhee-cCChhhHH---HHHH------hCCCEEEecCCCCccccch---HHHHHCC--------ceeeeCCH
Q 012492 338 MEKWMGACDCIIT-KAGPGTIA---EALI------RGLPIILNDYIPGQEKGNV---PYVVDNG--------AGVFTRSP 396 (462)
Q Consensus 338 ~~~l~~~aD~vV~-~sg~~t~~---EAla------~G~PvI~~~~~~~~~~~n~---~~l~~~G--------~g~~~~~~ 396 (462)
-..+...||.+|. ++|.+|+- |++. .++|+++.+..+-... -. +.+.+.| ...+++++
T Consensus 91 k~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~~g~~~~-l~~~l~~~~~~Gfi~~~~~~~~~~~~~~ 169 (191)
T 1t35_A 91 KAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEP-MMKMVKYSIQEGFSNESHLKLIHSSSRP 169 (191)
T ss_dssp HHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHH-HHHHHHHHHHTTSSCTTHHHHEEEESSH
T ss_pred HHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecCCcccch-HHHHHHHHHHCCCCCHHHcCeEEEeCCH
Confidence 3456788998765 55677764 4664 6899999975221110 11 2344444 23455677
Q ss_pred HHHHHHHHH
Q 012492 397 KETARIVTE 405 (462)
Q Consensus 397 ~~la~~i~~ 405 (462)
+++.+.+.+
T Consensus 170 ~e~~~~l~~ 178 (191)
T 1t35_A 170 DELIEQMQN 178 (191)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 776666654
|
| >3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=85.35 E-value=3.8 Score=35.68 Aligned_cols=36 Identities=31% Similarity=0.401 Sum_probs=25.6
Q ss_pred HHHHHHhcchhee-cCChhhHHH---HHH------hCCCEEEecCC
Q 012492 338 MEKWMGACDCIIT-KAGPGTIAE---ALI------RGLPIILNDYI 373 (462)
Q Consensus 338 ~~~l~~~aD~vV~-~sg~~t~~E---Ala------~G~PvI~~~~~ 373 (462)
-..++..||++|. ++|.+|+-| ++. .++|+++.+..
T Consensus 111 k~~m~~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~~ 156 (199)
T 3qua_A 111 KREMEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDPF 156 (199)
T ss_dssp HHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTT
T ss_pred HHHHHHhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcCC
Confidence 3456789998775 556778655 455 38999999864
|
| >2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=85.22 E-value=4.9 Score=35.49 Aligned_cols=27 Identities=26% Similarity=0.258 Sum_probs=21.1
Q ss_pred CCeEEEEecCCCchHHHHHHHHHHHHhhhcC
Q 012492 62 TKNVLILMSDTGGGHRASAEAIRDAFKIEFG 92 (462)
Q Consensus 62 ~~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~ 92 (462)
||||+|+.+++| .-+.++.++|.+.++
T Consensus 1 m~rI~vl~SG~g----~~~~~~l~~l~~~~~ 27 (216)
T 2ywr_A 1 MLKIGVLVSGRG----SNLQAIIDAIESGKV 27 (216)
T ss_dssp CEEEEEEECSCC----HHHHHHHHHHHTTSS
T ss_pred CCEEEEEEeCCc----HHHHHHHHHHHhCCC
Confidence 579999999986 456778888887653
|
| >2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A* | Back alignment and structure |
|---|
Probab=84.00 E-value=2.9 Score=35.25 Aligned_cols=67 Identities=16% Similarity=0.272 Sum_probs=41.7
Q ss_pred HHHHhcchheecC---ChhhHHH---HHHhCCCEEEecCCCCccccchHHHHHCCc----eeeeCCHHHHHHHHHHHh
Q 012492 340 KWMGACDCIITKA---GPGTIAE---ALIRGLPIILNDYIPGQEKGNVPYVVDNGA----GVFTRSPKETARIVTEWF 407 (462)
Q Consensus 340 ~l~~~aD~vV~~s---g~~t~~E---Ala~G~PvI~~~~~~~~~~~n~~~l~~~G~----g~~~~~~~~la~~i~~ll 407 (462)
+++..||++|.-- ..+|..| |.+.|+||++..........|.. +..... -+...+.+++.+.+.+.+
T Consensus 73 ~~i~~aD~vva~~~~~d~Gt~~EiGyA~algKPVi~l~~~~~~~~~n~M-~~g~~~~~~~~~~~y~~~el~~~l~~~~ 149 (165)
T 2khz_A 73 NWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAM-IRGAADGSRFQVWDYAEGEVETMLDRYF 149 (165)
T ss_dssp HHHHHCSEEEEECSSCCHHHHHHHHHHHHTCSSEEEEECTTTTCCCCHH-HHHTCCSSSEEEEECCTTTHHHHHHHHH
T ss_pred HHHHhCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEcCCCCCcchhh-hcccCccceeEEEecCHHHHHHHHHHHH
Confidence 7899999987643 3778888 78999999997543221233433 222211 122236677777777666
|
| >1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A* | Back alignment and structure |
|---|
Probab=83.97 E-value=0.72 Score=39.17 Aligned_cols=32 Identities=16% Similarity=0.202 Sum_probs=26.5
Q ss_pred HHHHhcchhee-----cCChhhHHH---HHHhCCCEEEec
Q 012492 340 KWMGACDCIIT-----KAGPGTIAE---ALIRGLPIILND 371 (462)
Q Consensus 340 ~l~~~aD~vV~-----~sg~~t~~E---Ala~G~PvI~~~ 371 (462)
+.+..||++|. ....+|..| |.+.|+||++..
T Consensus 77 ~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~algKPVv~l~ 116 (167)
T 1s2d_A 77 TGISNATCGVFLYDMDQLDDGSAFXIGFMRAMHKPVILVP 116 (167)
T ss_dssp HHHHHCSEEEEEEESSSCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHhCCEEEEECCCCCCCCCceeehhhHhhCCCeEEEEE
Confidence 57899999887 234778888 889999999995
|
| >2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A | Back alignment and structure |
|---|
Probab=83.57 E-value=8.3 Score=33.98 Aligned_cols=68 Identities=21% Similarity=0.213 Sum_probs=39.4
Q ss_pred HHHHHhcchhe-ecCChhhHHH---HHHh------CCCEEEecCCCCcc-ccc-hHHHHHCC--------ceeeeCCHHH
Q 012492 339 EKWMGACDCII-TKAGPGTIAE---ALIR------GLPIILNDYIPGQE-KGN-VPYVVDNG--------AGVFTRSPKE 398 (462)
Q Consensus 339 ~~l~~~aD~vV-~~sg~~t~~E---Ala~------G~PvI~~~~~~~~~-~~n-~~~l~~~G--------~g~~~~~~~~ 398 (462)
.-+...||.+| .++|.+|+-| ++.. ++|+++.+..+... ..+ .+.+++.| ...+++++++
T Consensus 104 ~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~g~w~~l~~~l~~~~~~Gfi~~~~~~~~~~~d~~ee 183 (215)
T 2a33_A 104 AEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTAKE 183 (215)
T ss_dssp HHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECGGGTTHHHHHHHHHHHHHTSSCHHHHTTEEEESSHHH
T ss_pred HHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecCcchhHHHHHHHHHHHHcCCCCHHHCCeEEEeCCHHH
Confidence 34667899866 4666778655 4454 89999988632111 000 11223333 2346778888
Q ss_pred HHHHHHHH
Q 012492 399 TARIVTEW 406 (462)
Q Consensus 399 la~~i~~l 406 (462)
+.+.+.+.
T Consensus 184 ~~~~l~~~ 191 (215)
T 2a33_A 184 LVKKLEEY 191 (215)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHHh
Confidence 77777654
|
| >3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii} | Back alignment and structure |
|---|
Probab=83.30 E-value=21 Score=31.64 Aligned_cols=26 Identities=23% Similarity=0.344 Sum_probs=20.5
Q ss_pred CCCeEEEEecCCCchHHHHHHHHHHHHhhh
Q 012492 61 RTKNVLILMSDTGGGHRASAEAIRDAFKIE 90 (462)
Q Consensus 61 ~~~kIli~~~~~G~Gh~~~a~aLa~~L~~~ 90 (462)
.||||+|+.+++| .-+.++.++|.+.
T Consensus 21 ~~~rI~~l~SG~g----~~~~~~l~~l~~~ 46 (229)
T 3auf_A 21 HMIRIGVLISGSG----TNLQAILDGCREG 46 (229)
T ss_dssp TCEEEEEEESSCC----HHHHHHHHHHHTT
T ss_pred CCcEEEEEEeCCc----HHHHHHHHHHHhC
Confidence 3689999999886 4567788888765
|
| >3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A | Back alignment and structure |
|---|
Probab=82.17 E-value=1.8 Score=38.47 Aligned_cols=30 Identities=17% Similarity=0.087 Sum_probs=22.9
Q ss_pred CCCeEEEEe-cCCCchHHHHHHHHHHHHhhh
Q 012492 61 RTKNVLILM-SDTGGGHRASAEAIRDAFKIE 90 (462)
Q Consensus 61 ~~~kIli~~-~~~G~Gh~~~a~aLa~~L~~~ 90 (462)
+|||||+++ ...|+-...++..++++|.+.
T Consensus 1 ~m~~VLvTGF~PF~~~~~NPS~~~v~~L~~~ 31 (223)
T 3ro0_A 1 MEKKVLLTGFDPFGGETVNPSWEAVKRLNGA 31 (223)
T ss_dssp -CEEEEEEEECCCTTCSCCHHHHHHHHTTTC
T ss_pred CCCEEEEEeCCCCCCCCCChHHHHHHHhccc
Confidence 378999998 457644678888899999875
|
| >3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica} | Back alignment and structure |
|---|
Probab=81.87 E-value=6.1 Score=38.76 Aligned_cols=69 Identities=19% Similarity=0.241 Sum_probs=40.6
Q ss_pred HHHHHhcchhee-cCChhhHHH---HHH---------hCCCEEEecCC--CCccccchHHHH------H-CCceeeeCCH
Q 012492 339 EKWMGACDCIIT-KAGPGTIAE---ALI---------RGLPIILNDYI--PGQEKGNVPYVV------D-NGAGVFTRSP 396 (462)
Q Consensus 339 ~~l~~~aD~vV~-~sg~~t~~E---Ala---------~G~PvI~~~~~--~~~~~~n~~~l~------~-~G~g~~~~~~ 396 (462)
...+..||+||. |+|.+|+-| ++. .++|+|+.+.. .+.-..-..++. + ...-++++++
T Consensus 240 ~~mv~~SDAfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg~~n~~gywd~Ll~~l~~~l~~~~~~~~iiv~ddp 319 (460)
T 3bq9_A 240 EAFVRCAHGIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILTGPASSRDYFEALDEFIGATIGDEARQLYKIIIDDP 319 (460)
T ss_dssp HHHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHHHHHHHHHTCTTGGGGCEEEESCH
T ss_pred HHHHHhCCEEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEEecCCccchhhHHHHHHHHHhcchhhcCcEEEeCCH
Confidence 456778998765 666788655 455 37999998621 110000111111 1 1223467899
Q ss_pred HHHHHHHHHHh
Q 012492 397 KETARIVTEWF 407 (462)
Q Consensus 397 ~~la~~i~~ll 407 (462)
+++.+.+.+.+
T Consensus 320 eEal~~l~~~~ 330 (460)
T 3bq9_A 320 AAVAQHMHAGM 330 (460)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99998888776
|
| >2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A* | Back alignment and structure |
|---|
Probab=80.31 E-value=19 Score=32.85 Aligned_cols=40 Identities=18% Similarity=0.252 Sum_probs=26.8
Q ss_pred cCCCCC--CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEec
Q 012492 57 IGAERT--KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDV 102 (462)
Q Consensus 57 ~~~~~~--~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~ 102 (462)
+|.++| ++|.|+-+|.| | +.+.+++.+.-|+...+++.|.
T Consensus 5 ~~~~~~~~~~IGv~DsG~G-g-----ltv~~~i~~~~P~~~~iy~~D~ 46 (273)
T 2oho_A 5 RGSHMMDTRPIGFLDSGVG-G-----LTVVCELIRQLPHEKIVYIGDS 46 (273)
T ss_dssp TSSCBCCCCCEEEEESSST-T-----HHHHHHHHHHCTTCCEEEEECG
T ss_pred CcccccCCCcEEEEeCCCc-H-----HHHHHHHHHHCCCCCEEEEeCC
Confidence 344443 57999988996 5 4566777776665556677764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 462 | ||||
| d1f0ka_ | 351 | c.87.1.2 (A:) Peptidoglycan biosynthesis glycosylt | 5e-10 | |
| d1rrva_ | 401 | c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am | 2e-07 | |
| d1pn3a_ | 391 | c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA | 6e-07 | |
| d1iira_ | 401 | c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycol | 3e-06 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 1e-05 |
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Length = 351 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Score = 58.6 bits (140), Expect = 5e-10
Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 3/120 (2%)
Query: 325 WKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPII--LNDYIPGQEKGNVP 382
+ KV F M D ++ ++G T++E GLP + + Q+ N
Sbjct: 229 GQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNAL 288
Query: 383 YVVDNGAGVFTRSPKETARIVTEWFSTKTDE-LKRMSENALKLAQPEAVVDIVKDIHDLA 441
+ GA P+ + V + + E L M+E A + P+A + ++ +A
Sbjct: 289 PLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERARAASIPDATERVANEVSRVA 348
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Score = 50.5 bits (119), Expect = 2e-07
Identities = 17/118 (14%), Positives = 32/118 (27%), Gaps = 7/118 (5%)
Query: 329 VKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIP--GQEKGNVPYVVD 386
+ +I GT A G+P ++ IP + V
Sbjct: 288 CFAIDE-VNFQALFRRVAAVIHHGSAGTEHVATRAGVPQLV---IPRNTDQPYFAGRVAA 343
Query: 387 NGAGVFTRSPKETARIVTEWFST-KTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443
G GV P T ++ +T E + +E + + + +
Sbjct: 344 LGIGVAHDGPTPTFESLSAALTTVLAPETRARAEAVAGMVLTDGAAAAADLVLAAVGR 401
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Length = 391 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 48.9 bits (115), Expect = 6e-07
Identities = 48/382 (12%), Positives = 81/382 (21%), Gaps = 38/382 (9%)
Query: 75 GHRASAEAIRDAFKIEF---GDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVA 131
E + + G R ++ P E + + + A
Sbjct: 35 LPPDYVERCAEV-GVPMVPVGRAVRAGAREP----GELPPGAAEVVTEVVAEWFDKVPAA 89
Query: 132 FHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKK 191
AA+A E K I L
Sbjct: 90 IEGCDAVVTTGLLPAAVAVRSMAE--------KLGIPYRYTVLSPDHLPSEQSQAERD-- 139
Query: 192 VIFVTVITDLNTCHPTWFHPRVNRCYCPSKEVAKRASYFGLEVSQIRVFGLPIRPSFVRA 251
++ L + L + P V+
Sbjct: 140 -MYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLRPTDLGTVQT 198
Query: 252 VISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICG 311
L + L A L G PV + I +
Sbjct: 199 G------AWILPDERPLSAELEAFLAAGSTPVYVGFGSSSRPATADAAKMAIKAVRASGR 252
Query: 312 RNRTLASTLQSEEWKIP--VKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIIL 369
R V G +++ G I GT A+ G+P I+
Sbjct: 253 RIVLSRGWADLVLPDDGADCFVVGE-VNLQELFGRVAAAIHHDSAGTTLLAMRAGIPQIV 311
Query: 370 ----NDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLA 425
D + Q + V + G GV P T ++ T + A +A
Sbjct: 312 VRRVVDNVVEQAY-HADRVAELGVGVAVDGPVPTIDSLSAALDTALAP--EIRARATTVA 368
Query: 426 Q---PEAVVDIVKDIHDLAAQR 444
+ + + D +
Sbjct: 369 DTIRADGTTVAAQLLFDAVSLE 390
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Score = 47.0 bits (110), Expect = 3e-06
Identities = 22/121 (18%), Positives = 37/121 (30%), Gaps = 11/121 (9%)
Query: 329 VKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIP--GQEKGNVPYVVD 386
G + G +I G GT A G P IL +P + V +
Sbjct: 287 CFAIGE-VNHQVLFGRVAAVIHHGGAGTTHVAARAGAPQIL---LPQMADQPYYAGRVAE 342
Query: 387 NGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLA---QPEAVVDIVKDIHDLAAQ 443
G GV P T ++ +T A +A + + + + D ++
Sbjct: 343 LGVGVAHDGPIPTFDSLSAALATALTP--ETHARATAVAGTIRTDGAAVAARLLLDAVSR 400
Query: 444 R 444
Sbjct: 401 E 401
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 45.2 bits (105), Expect = 1e-05
Identities = 42/353 (11%), Positives = 87/353 (24%), Gaps = 22/353 (6%)
Query: 84 RDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSC 143
R +I + +DV + + V L + P +H
Sbjct: 70 RGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLL--LNDLLREEPLPDVVHFH 127
Query: 144 YLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNT 203
+ A P + +P + GL + + + +
Sbjct: 128 DWHTVFAG----ALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTG 183
Query: 204 CHPTWFHPRVNRCYCPSKEVAKRASYFGLEV----SQIRVFGLPIRPSFVRAVISKDNLR 259
+ V+R Y + R + + +
Sbjct: 184 GYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSK 243
Query: 260 LELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLAST 319
+ + G+ V A+ + S + + R I S
Sbjct: 244 FGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSL 303
Query: 320 LQSEEWKIPVKVRGFETQMEKWMGACDCII----TKAGPGTIAEALIRGLPIILNDYIPG 375
+ + + + G+ D +I + EA+ G I +
Sbjct: 304 EEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV--- 360
Query: 376 QEKGNVPYVVDNGAGVF--TRSPKETARIVTEWFSTKTDELKRMSENALKLAQ 426
G + ++ N G+ P E A + + +L + EN K A
Sbjct: 361 ---GGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAM 410
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 462 | |||
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.97 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.91 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.91 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.89 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 99.82 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.81 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 99.76 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 99.73 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 99.71 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 99.63 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.6 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 99.55 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 99.52 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.41 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 99.4 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.37 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 99.28 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 98.01 | |
| d1b74a1 | 105 | Glutamate racemase {Aquifex pyrophilus [TaxId: 271 | 96.31 | |
| d1rcua_ | 170 | Hypothetical protein TM1055 {Thermotoga maritima [ | 94.28 | |
| d1t35a_ | 179 | Hypothetical protein YvdD {Bacillus subtilis [TaxI | 89.44 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 87.88 | |
| d2q4oa1 | 183 | Hypothetical protein At2g37210/T2N18.3 {Thale cres | 87.62 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 83.36 | |
| d1ydhb_ | 181 | Hypothetical protein At5g11950 {Thale cress (Arabi | 83.06 | |
| d1uana_ | 227 | Hypothetical protein TT1542 {Thermus thermophilus | 81.3 |
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=8e-29 Score=241.13 Aligned_cols=343 Identities=16% Similarity=0.163 Sum_probs=219.6
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhH
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHS 142 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 142 (462)
|||+|+++|+| ||.++|.+|+++|+++|| +|.+.... .+...+.++. + ..+...........+....
T Consensus 1 kkili~~~GtG-GHv~~a~al~~~L~~~G~---eV~~i~~~---~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~ 67 (351)
T d1f0ka_ 1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGW---QVRWLGTA---DRMEADLVPK-H-----GIEIDFIRISGLRGKGIKA 67 (351)
T ss_dssp CEEEEECCSSH-HHHHHHHHHHHHHHTTTC---EEEEEECT---TSTHHHHGGG-G-----TCEEEECCCCCCTTCCHHH
T ss_pred CEEEEEcCCcH-HHHHHHHHHHHHHHhCCC---EEEEEEeC---Ccchhhcccc-c-----CCcEEEEECCCcCCCCHHH
Confidence 69999999997 999999999999999986 44433211 1100000000 0 0000000000000001111
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCC-CcccccCCCcEEEEcC
Q 012492 143 CYL-AAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTC-HPTWFHPRVNRCYCPS 220 (462)
Q Consensus 143 ~~~-~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~-~~~~~~~~~d~~i~~s 220 (462)
... ............+++++++||+++++++.........++. .++|++.+.++.... ...+....++.+....
T Consensus 68 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~----~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (351)
T d1f0ka_ 68 LIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWS----LGIPVVLHEQNGIAGLTNKWLAKIATKVMQAF 143 (351)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHH----TTCCEEEEECSSSCCHHHHHHTTTCSEEEESS
T ss_pred HHHHHHHHHHhHHHHHHHhhccccceeeecccchhhhhhhhhhh----cccceeecccccccchhHHHhhhhcceeeccc
Confidence 100 1111233456668899999999999987766554445554 489998877765321 1123334455554432
Q ss_pred HHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCC
Q 012492 221 KEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETG 300 (462)
Q Consensus 221 ~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~ 300 (462)
.. .......+++|....+...+ .. +.+.....+...++++||+.|.....+.+.+.+..+..
T Consensus 144 ~~----------~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~i~~~~gs~g~~~~~~~~~~~~~~l~~---- 205 (351)
T d1f0ka_ 144 PG----------AFPNAEVVGNPVRTDVLALP--LP--QQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGD---- 205 (351)
T ss_dssp TT----------SSSSCEECCCCCCHHHHTSC--CH--HHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG----
T ss_pred cc----------cccceeEEcCCcccccccch--hH--HhhhhcccCCcccccccccchhhhhHHHHHHhhhhhcc----
Confidence 11 12345677888877665532 11 12233445556788889999987777766666555543
Q ss_pred CCCceEEEEccCCHHH-HHHHhhccCCCCeEEeccchhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCC--CCcc
Q 012492 301 RPIGQLIIICGRNRTL-ASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYI--PGQE 377 (462)
Q Consensus 301 ~~~~~~lvv~G~~~~l-~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~--~~~~ 377 (462)
....+++++..... ...........++.+.+|.++|.++|+.||++|+++|++|++|++++|+|+|+.|.. .++|
T Consensus 206 --~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~lm~~adl~It~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q 283 (351)
T d1f0ka_ 206 --SVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQ 283 (351)
T ss_dssp --GEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHH
T ss_pred --cceeeeeccccchhhhhhhhcccccccceeeeehhhHHHHHHhCchhhccccchHHHHHHHhCCceeeeecccCCchH
Confidence 12334444433221 111222235578899999999999999999999999999999999999999999864 3678
Q ss_pred ccchHHHHHCCceeeeCCHHHHHHHHHHHhc-CCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHh
Q 012492 378 KGNVPYVVDNGAGVFTRSPKETARIVTEWFS-TKTDELKRMSENALKLAQPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 378 ~~n~~~l~~~G~g~~~~~~~~la~~i~~ll~-~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~ 442 (462)
..||+.+.+.|+|+.+++.+...+.+.+++. -+++.+.+|++++++...++++++|++.|+++++
T Consensus 284 ~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l~~~~~~~~~~~~~~~~~~~~a~~i~~~i~~l~~ 349 (351)
T d1f0ka_ 284 YWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERARAASIPDATERVANEVSRVAR 349 (351)
T ss_dssp HHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTCCHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCEEEechhhCCHHHHHHHHHhhCHHHHHHHHHHHHccCCccHHHHHHHHHHHHHh
Confidence 8899999999999988754444445554442 2678889999999999999999999999999875
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=6.6e-23 Score=199.13 Aligned_cols=222 Identities=16% Similarity=0.199 Sum_probs=166.1
Q ss_pred CCCcEEEEcCHHHHHHHHH-cCCCCCcEEEcCCCCChhhhcc---cCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHH
Q 012492 211 PRVNRCYCPSKEVAKRASY-FGLEVSQIRVFGLPIRPSFVRA---VISKDNLRLELQMDPILPAVLLMGGGEGMGPVKET 286 (462)
Q Consensus 211 ~~~d~~i~~s~~~~~~l~~-~gi~~~~i~v~g~pv~~~~~~~---~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~ 286 (462)
...+.+++.++...+.+.+ .+.+.+++.+++|++++....+ +..++..|..++++++.++++.+|+....++...+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~l 213 (370)
T d2iw1a1 134 GKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRS 213 (370)
T ss_dssp TCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHH
T ss_pred ccCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhccCCCccceEEEEEeccccccchhhh
Confidence 3467888888888877765 4888889999999998764332 13456788889998888776666655556666666
Q ss_pred HHHHHHhhhcccCCCCCceEEEEccCCH--HHHHHHhhccCCCCeEEeccchhHHHHHHhcchheecC----ChhhHHHH
Q 012492 287 AMALGESLLDKETGRPIGQLIIICGRNR--TLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKA----GPGTIAEA 360 (462)
Q Consensus 287 l~~l~~~l~~~~~~~~~~~~lvv~G~~~--~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~vV~~s----g~~t~~EA 360 (462)
++++ +.+.++ .++..+++++|.+. .+++..++++...++++.|+.+++.++|+.||++|.+| .|++++||
T Consensus 214 i~a~-~~l~~~---~~~~~~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~v~ps~~E~~~~~~~EA 289 (370)
T d2iw1a1 214 IEAL-ASLPES---LRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEA 289 (370)
T ss_dssp HHHH-HTSCHH---HHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCSCCSSCHHHHHH
T ss_pred cccc-cccccc---cccceeeeccccccccccccccccccccccccccccccccccccccccccccccccccccceeeec
Confidence 6655 444432 23444555554432 46666777788889999999999999999999999986 38999999
Q ss_pred HHhCCCEEEecCCCCccccchHHHHHCCceeee---CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHH
Q 012492 361 LIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFT---RSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDI 437 (462)
Q Consensus 361 la~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~---~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i 437 (462)
|++|+|+|+++.++. .+.+.+.+.|.++ .|+++++++|.+++ +|++.+++|+++++++++.+.+..+.+.+
T Consensus 290 ma~G~PvI~s~~~g~-----~e~i~~~~~G~l~~~~~d~~~la~~i~~ll-~d~~~~~~~~~~ar~~~~~~~~~~~~~~~ 363 (370)
T d2iw1a1 290 ITAGLPVLTTAVCGY-----AHYIADANCGTVIAEPFSQEQLNEVLRKAL-TQSPLRMAWAENARHYADTQDLYSLPEKA 363 (370)
T ss_dssp HHHTCCEEEETTSTT-----THHHHHHTCEEEECSSCCHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHSCCSCHHHHH
T ss_pred ccCCeeEEEeCCCCh-----HHHhcCCCceEEEcCCCCHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHhChhHHHHHH
Confidence 999999999987542 3346666677654 37899999999999 79999999999999998766555666666
Q ss_pred HHHHh
Q 012492 438 HDLAA 442 (462)
Q Consensus 438 ~~l~~ 442 (462)
.++++
T Consensus 364 ~~ii~ 368 (370)
T d2iw1a1 364 ADIIT 368 (370)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66654
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.91 E-value=1.4e-22 Score=202.26 Aligned_cols=267 Identities=18% Similarity=0.072 Sum_probs=176.7
Q ss_pred hCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCc-----------cc-----------ccCCCcEEEEcC
Q 012492 163 YKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHP-----------TW-----------FHPRVNRCYCPS 220 (462)
Q Consensus 163 ~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~-----------~~-----------~~~~~d~~i~~s 220 (462)
..||+|+++.......+..+++. .++|+|...|+...... .+ ....+|.+++.+
T Consensus 119 ~~pDiIh~~~~~~~~~~~~~~~~----~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~ 194 (437)
T d2bisa1 119 PLPDVVHFHDWHTVFAGALIKKY----FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVS 194 (437)
T ss_dssp CCCSEEEEETGGGHHHHHHHHHH----HCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESC
T ss_pred CCCCEEEECChhhhhHhhhhhcc----ccCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccc
Confidence 36899998776544333333333 38999988887642110 00 012357788888
Q ss_pred HHHHHHHHH-cCCCCCcEEEcCCCCChhhhccc---CC----hHHHHHHcCCCCCCcEEEEEeCCCCC-ccHHHHHHHHH
Q 012492 221 KEVAKRASY-FGLEVSQIRVFGLPIRPSFVRAV---IS----KDNLRLELQMDPILPAVLLMGGGEGM-GPVKETAMALG 291 (462)
Q Consensus 221 ~~~~~~l~~-~gi~~~~i~v~g~pv~~~~~~~~---~~----~~~~r~~l~l~~~~~~iLv~gG~~~~-~~~~~~l~~l~ 291 (462)
......... .+.+..++.+++|+++.+.+.+. .. +...+.++++.+ .+.++++|+.... ++...++.++
T Consensus 195 ~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~G~~~~~~Kg~~~ll~a~- 272 (437)
T d2bisa1 195 RGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDE-GVTFMFIGRFDRGQKGVDVLLKAI- 272 (437)
T ss_dssp HHHHHHTHHHHGGGTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCS-CEEEEEESCBCSSSSCHHHHHHHH-
T ss_pred hhhhhhhhhhhccccCceEEEecccccccccccccchhhHHHHHhhhhhhhccC-CceEEEeecccccchhHHHHHhhh-
Confidence 776655433 34556789999999988765431 11 234567788754 4556666554333 4555555544
Q ss_pred HhhhcccCCCCCceEEEEccCCH-HHHHHHhhc--cCCCCeEEeccc--hhHHHHHHhcchheecC----ChhhHHHHHH
Q 012492 292 ESLLDKETGRPIGQLIIICGRNR-TLASTLQSE--EWKIPVKVRGFE--TQMEKWMGACDCIITKA----GPGTIAEALI 362 (462)
Q Consensus 292 ~~l~~~~~~~~~~~~lvv~G~~~-~l~~~~~~~--~~~~~V~~~g~~--~~~~~l~~~aD~vV~~s----g~~t~~EAla 362 (462)
..+.... ..+++++++ +|.+. .....++.+ .....+.+.|+. +++..+++.||+++.+| .|++++|||+
T Consensus 273 ~~~~~~~-~~~~~~lvi-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama 350 (437)
T d2bisa1 273 EILSSKK-EFQEMRFII-IGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMC 350 (437)
T ss_dssp HHHTTSG-GGGGEEEEE-ECCBCHHHHHHHHHHHHTCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHT
T ss_pred ccccccc-ccccceeee-ecccccccccchhhhccccccceeccccCcHHHHHHHHhhhccccccccccccchHHHHHHH
Confidence 3332211 135677655 45543 222222221 233445566665 67999999999999876 3889999999
Q ss_pred hCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH
Q 012492 363 RGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDL 440 (462)
Q Consensus 363 ~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l 440 (462)
+|+|+|+++.++ ...+++.+.|++++ |+++++++|.++|.+|++.+++|++++++.++.++|+++++.++++
T Consensus 351 ~G~Pvi~~~~g~------~~e~i~~~~G~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~i 424 (437)
T d2bisa1 351 LGAIPIASAVGG------LRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKA 424 (437)
T ss_dssp TTCEEEEESCTT------HHHHCCTTTCEEECTTCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred CCCCEEEeCCCC------cHHhEECCcEEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999998643 22345556777764 7999999999998557889999999999998889999999999998
Q ss_pred Hhc
Q 012492 441 AAQ 443 (462)
Q Consensus 441 ~~~ 443 (462)
.++
T Consensus 425 Y~~ 427 (437)
T d2bisa1 425 YTG 427 (437)
T ss_dssp HHT
T ss_pred HHH
Confidence 864
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.89 E-value=3.2e-21 Score=195.58 Aligned_cols=279 Identities=13% Similarity=0.083 Sum_probs=173.5
Q ss_pred HHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC------------cc-cc------------
Q 012492 155 EVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH------------PT-WF------------ 209 (462)
Q Consensus 155 ~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~------------~~-~~------------ 209 (462)
.+.+.+..++|||||++.......+ ...+... ..++|+|..+|+..... +. ++
T Consensus 121 ~~~~~~~~~~pDIvH~h~~~~~l~~-~~~~~~~-~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (477)
T d1rzua_ 121 IGAGVLPGWRPDMVHAHDWQAAMTP-VYMRYAE-TPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVS 198 (477)
T ss_dssp HHTTCSSSCCCSEEEEEHHHHTTHH-HHHHHSS-SCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEE
T ss_pred hhhhcccCCCCCEEEecchhHHHHH-HHHHHhh-CCCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhH
Confidence 3344455679999999764443332 2333332 25899999888753100 00 00
Q ss_pred -----cCCCcEEEEcCHHHHHHHHH--cCC--------CCCcEEEcCCCCChhhhccc------------------CChH
Q 012492 210 -----HPRVNRCYCPSKEVAKRASY--FGL--------EVSQIRVFGLPIRPSFVRAV------------------ISKD 256 (462)
Q Consensus 210 -----~~~~d~~i~~s~~~~~~l~~--~gi--------~~~~i~v~g~pv~~~~~~~~------------------~~~~ 256 (462)
...+|.+.+++....+.... .+. ...++.++.|+++.+.+++. ....
T Consensus 199 ~~~~~~~~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~ 278 (477)
T d1rzua_ 199 FLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKK 278 (477)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHH
T ss_pred HHHHHHHhhhhhhhccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHH
Confidence 12368889999876654421 111 23578899998876544321 0123
Q ss_pred HHHHHcCCCCC-CcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHh--hccCCCCeEEec
Q 012492 257 NLRLELQMDPI-LPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQ--SEEWKIPVKVRG 333 (462)
Q Consensus 257 ~~r~~l~l~~~-~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~--~~~~~~~V~~~g 333 (462)
.++...+++++ .++++++|+....|++..+++++ +.+.+ .+.++++++.........+. ......++.+.+
T Consensus 279 ~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~-~~~~~-----~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~ 352 (477)
T d1rzua_ 279 AVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAV-DEIVS-----LGGRLVVLGAGDVALEGALLAAASRHHGRVGVAI 352 (477)
T ss_dssp HHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTH-HHHHH-----TTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEE
T ss_pred HHHHhcccccCCccEEEEEeeeeecCCcHHHHHHH-HHHHh-----hCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEc
Confidence 45566777654 45565555555556665555544 44433 14565444332222222222 224567898887
Q ss_pred cc--hhHHHHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCccc---cchHHH-HHCCceeeeC--CHHHHHH
Q 012492 334 FE--TQMEKWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEK---GNVPYV-VDNGAGVFTR--SPKETAR 401 (462)
Q Consensus 334 ~~--~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~---~n~~~l-~~~G~g~~~~--~~~~la~ 401 (462)
+. +....+|+.||++|.+|. |.+++|||++|+|+|+++.++-.+. +....+ ...+.|++++ |++++++
T Consensus 353 ~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ 432 (477)
T d1rzua_ 353 GYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQ 432 (477)
T ss_dssp SCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHH
T ss_pred ccChhHHHHHHHhCccccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHH
Confidence 76 456678999999999984 8999999999999999987531110 111122 2234677664 7999999
Q ss_pred HHHHHhc--CCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhc
Q 012492 402 IVTEWFS--TKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 402 ~i~~ll~--~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~ 443 (462)
+|.++++ +|++.+++|++++. .+.++|+++|+.++++.++
T Consensus 433 ai~~~l~~~~~~~~~~~~~~~a~--~~~fsw~~~a~~~~~lY~~ 474 (477)
T d1rzua_ 433 AIRRTVRYYHDPKLWTQMQKLGM--KSDVSWEKSAGLYAALYSQ 474 (477)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHH--TCCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhCCHHHHHHHHHHHH--HhhCCHHHHHHHHHHHHHH
Confidence 9987763 58999999998874 4679999999999998754
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.82 E-value=1.4e-18 Score=170.66 Aligned_cols=162 Identities=12% Similarity=0.062 Sum_probs=120.4
Q ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHHHhc
Q 012492 266 PILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGAC 345 (462)
Q Consensus 266 ~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~a 345 (462)
.+.+.++++.|+.......+....+++.+.. .+ ..++++.+.... .......|+.+.+|++ +.+++..|
T Consensus 235 ~~~~~v~~~~gs~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~-----~~~~~~~~v~~~~~~p-~~~ll~~~ 303 (401)
T d1rrva_ 235 AGSPPVHIGFGSSSGRGIADAAKVAVEAIRA----QG-RRVILSRGWTEL-----VLPDDRDDCFAIDEVN-FQALFRRV 303 (401)
T ss_dssp SSSCCEEECCTTCCSHHHHHHHHHHHHHHHH----TT-CCEEEECTTTTC-----CCSCCCTTEEEESSCC-HHHHGGGS
T ss_pred cCCCeEEEECCccccCCHHHHHHHHHHHHhh----cC-CeEEEecccccc-----ccccCCCCEEEEeccC-cHHHhhhc
Confidence 3445678888877765555555555555543 12 234555554421 1124568999999995 67899999
Q ss_pred chheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 012492 346 DCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDELKRMSENA 421 (462)
Q Consensus 346 D~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~~~~m~~~a 421 (462)
|++|+++|.+|++||+++|+|+|+.|...+ |..|+..+++.|+|+.++ +++.++++|.++| +++.+++..+.+
T Consensus 304 ~~~I~hgG~~t~~Eal~~GvP~l~~P~~~D-Q~~na~~v~~~G~g~~l~~~~~~~~~L~~ai~~vl--~~~~r~~a~~~~ 380 (401)
T d1rrva_ 304 AAVIHHGSAGTEHVATRAGVPQLVIPRNTD-QPYFAGRVAALGIGVAHDGPTPTFESLSAALTTVL--APETRARAEAVA 380 (401)
T ss_dssp SEEEECCCHHHHHHHHHHTCCEEECCCSBT-HHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHHT--SHHHHHHHHHHT
T ss_pred cEEEecCCchHHHHHHHhCCCEEEeccccc-HHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHh--CHHHHHHHHHHH
Confidence 999999999999999999999999998654 566999999999998874 4889999999998 466666655544
Q ss_pred HhhcCCcHHHHHHHHHHHHHh
Q 012492 422 LKLAQPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 422 ~~~~~~~~~~~ia~~i~~l~~ 442 (462)
+....+++.++++.|++.+.
T Consensus 381 -~~~~~~g~~~aa~~ie~~~~ 400 (401)
T d1rrva_ 381 -GMVLTDGAAAAADLVLAAVG 400 (401)
T ss_dssp -TTCCCCHHHHHHHHHHHHHH
T ss_pred -HHHhhcCHHHHHHHHHHHhC
Confidence 34456788999999998764
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.81 E-value=4.8e-19 Score=173.40 Aligned_cols=163 Identities=13% Similarity=0.108 Sum_probs=120.1
Q ss_pred CcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHHHhcch
Q 012492 268 LPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDC 347 (462)
Q Consensus 268 ~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD~ 347 (462)
.+.+++..++.......+....+++.+.. .+.++++..+.... .......|+.+.+|++ +..+|..+|+
T Consensus 221 ~~~v~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~-----~~~~~~~~v~i~~~~p-~~~ll~~a~~ 289 (391)
T d1pn3a_ 221 STPVYVGFGSSSRPATADAAKMAIKAVRA-----SGRRIVLSRGWADL-----VLPDDGADCFVVGEVN-LQELFGRVAA 289 (391)
T ss_dssp SCCEEEECTTCCSTHHHHHHHHHHHHHHH-----TTCCEEEECTTTTC-----CCSSCCTTCCEESSCC-HHHHHTTSSC
T ss_pred CCeEEEeccccccccHHHHHHHHHHHHHh-----cCCEEEEecccccc-----ccccCCCCEEEecccC-HHHHHhhccE
Confidence 34566666666655555555555555543 23345554443221 1223567899999995 6789999999
Q ss_pred heecCChhhHHHHHHhCCCEEEecCCC---CccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHHHHHHHHH
Q 012492 348 IITKAGPGTIAEALIRGLPIILNDYIP---GQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDELKRMSEN 420 (462)
Q Consensus 348 vV~~sg~~t~~EAla~G~PvI~~~~~~---~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~~~~m~~~ 420 (462)
||+++|.+|++||+++|+|+|+.|... ++|..|++.+.+.|+|+.++ ++++++++|.++| + ++.+++..+.
T Consensus 290 ~v~hgG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l-~-~~~r~~a~~~ 367 (391)
T d1pn3a_ 290 AIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVPTIDSLSAALDTAL-A-PEIRARATTV 367 (391)
T ss_dssp EEEESCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSSCCHHHHHHHHHHHT-S-TTHHHHHHHH
T ss_pred EEecCchHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHh-C-HHHHHHHHHH
Confidence 999999999999999999999999864 35778999999999998874 4789999999999 4 4566665555
Q ss_pred HHhhcCCcHHHHHHHHHHHHHhcc
Q 012492 421 ALKLAQPEAVVDIVKDIHDLAAQR 444 (462)
Q Consensus 421 a~~~~~~~~~~~ia~~i~~l~~~~ 444 (462)
+++. +.++..+.++.|++.+.++
T Consensus 368 a~~~-~~~g~~~aa~~i~~~l~~~ 390 (391)
T d1pn3a_ 368 ADTI-RADGTTVAAQLLFDAVSLE 390 (391)
T ss_dssp GGGS-CSCHHHHHHHHHHHHHHHH
T ss_pred HHHH-HhcCHHHHHHHHHHHHHhc
Confidence 5444 4578999999999988764
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=99.76 E-value=9.3e-17 Score=156.72 Aligned_cols=278 Identities=13% Similarity=0.051 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHhhCCCEEEECCcccchHHHH-HHHHcCCCCCCeEEEEecCCCCC----------CcccccCCCcEEEEc
Q 012492 151 YYAKEVEAGLMEYKPDIIISVHPLMQHIPLW-VLKWQGLQKKVIFVTVITDLNTC----------HPTWFHPRVNRCYCP 219 (462)
Q Consensus 151 ~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~-~~~~~~~~~~iP~v~~~~d~~~~----------~~~~~~~~~d~~i~~ 219 (462)
....++.+++.+.+||+|++.+......+.. ++.. .++|++++.....+. .+....+.++..+|+
T Consensus 75 ~~~~~~~~~l~~~kPD~vlv~GDr~e~la~a~aa~~----~~ipi~HiegG~rsg~~~~~~~de~~R~~iskls~~hf~~ 150 (373)
T d1v4va_ 75 RILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFL----EGIPVGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAP 150 (373)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHH----TTCCEEEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEES
T ss_pred HHHHHHhhhhhhcCcccccccccCccchhHHHHHHH----hhhhheeecccccccccccCcchhhhhhhhccccceeeec
Confidence 3445777899999999999888654443322 3333 589998765422110 011234578999999
Q ss_pred CHHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccC
Q 012492 220 SKEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKET 299 (462)
Q Consensus 220 s~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~ 299 (462)
++..++.+.+.|.++.+|.++|+|.-+.+... . ...+.....++.++++++..........+.+..+...+.+.
T Consensus 151 t~~~~~~L~~~Ge~~~~I~~vG~p~~D~i~~~---~-~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~-- 224 (373)
T d1v4va_ 151 TPLAKANLLKEGKREEGILVTGQTGVDAVLLA---A-KLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEA-- 224 (373)
T ss_dssp SHHHHHHHHTTTCCGGGEEECCCHHHHHHHHH---H-HHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHH--
T ss_pred chhhhhhhhhhcccccceeecccchhhHHHhh---h-hhcccccccccccceeEEeccccccchHHHHHHHHHHHhhh--
Confidence 99999999999999999999999875554321 1 11111112234567778766544332222222333333332
Q ss_pred CCCCceEEEEccCCHHHHHHH-hhccCCCCeEEeccc--hhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCCCc
Q 012492 300 GRPIGQLIIICGRNRTLASTL-QSEEWKIPVKVRGFE--TQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQ 376 (462)
Q Consensus 300 ~~~~~~~lvv~G~~~~l~~~~-~~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~ 376 (462)
..+..+++............ +......++.++... .++..+|..|+++|+.||++ +.||.++|+|+|.....+..
T Consensus 225 -~~~~~~i~p~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vignSssg-i~Ea~~lg~P~Inir~~~eR 302 (373)
T d1v4va_ 225 -FPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDSGGL-QEEGAALGVPVVVLRNVTER 302 (373)
T ss_dssp -CTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESCHHH-HHHHHHTTCCEEECSSSCSC
T ss_pred -cccceeeeeecccccchhhhhhhhcccccceeeccchHHHHHHHhhhceeEecccchh-hhcchhhcCcEEEeCCCccC
Confidence 23556666666655333222 223445688887765 57778999999999998854 68999999999998665554
Q ss_pred cccchHHHHHCCceeee-CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhccCC
Q 012492 377 EKGNVPYVVDNGAGVFT-RSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQRGP 446 (462)
Q Consensus 377 ~~~n~~~l~~~G~g~~~-~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~~~~ 446 (462)
|. . .+.|..+++ .+++++.+++..++ ++++.+++|.....-+.+..++++|++.|.+.++...+
T Consensus 303 qe----g-~~~g~nvlv~~d~~~I~~~i~~~l-~~~~~~~~~~~~~npYGdG~as~rI~~~L~~~~~~~~~ 367 (373)
T d1v4va_ 303 PE----G-LKAGILKLAGTDPEGVYRVVKGLL-ENPEELSRMRKAKNPYGDGKAGLMVARGVAWRLGLGPR 367 (373)
T ss_dssp HH----H-HHHTSEEECCSCHHHHHHHHHHHH-TCHHHHHHHHHSCCSSCCSCHHHHHHHHHHHHTTSSCC
T ss_pred HH----H-HhcCeeEEcCCCHHHHHHHHHHHH-cCHHHHhhcccCCCCCCCCHHHHHHHHHHHHHhCCCCC
Confidence 44 2 345665555 57999999999999 79999998887666678889999999999999875544
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.73 E-value=2.4e-16 Score=154.03 Aligned_cols=160 Identities=16% Similarity=0.122 Sum_probs=111.7
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHHHHHHHhhccCCCCeEEeccchhHHHHHHhcc
Q 012492 267 ILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACD 346 (462)
Q Consensus 267 ~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~~~~~~~V~~~g~~~~~~~l~~~aD 346 (462)
..+.+++++|+.... .+.+..+.+.+.. .+..++++.|.... .......|+.+.+|.+ +..+|..+|
T Consensus 237 ~~~~i~~~~~~~~~~--~~~~~~~~~al~~-----~~~~~~~~~~~~~~-----~~~~~~~nv~~~~~~p-~~~~l~~~~ 303 (401)
T d1iira_ 237 GPPPVYLGFGSLGAP--ADAVRVAIDAIRA-----HGRRVILSRGWADL-----VLPDDGADCFAIGEVN-HQVLFGRVA 303 (401)
T ss_dssp SSCCEEEECC---CC--HHHHHHHHHHHHH-----TTCCEEECTTCTTC-----CCSSCGGGEEECSSCC-HHHHGGGSS
T ss_pred CCCeEEEccCccccc--hHHHHHHHHHHHH-----cCCeEEEeccCCcc-----ccccCCCCEEEEeccC-HHHHHhhcC
Confidence 344566666655432 2223333333332 12345666665431 1123457899999996 578999999
Q ss_pred hheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC----CHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 012492 347 CIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR----SPKETARIVTEWFSTKTDELKRMSENAL 422 (462)
Q Consensus 347 ~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~----~~~~la~~i~~ll~~d~~~~~~m~~~a~ 422 (462)
++|+++|.+|++||+++|+|+|+.|...+ |..|++.+++.|+|+.++ ++++++++|.++| + ++.+++..+.++
T Consensus 304 ~~V~hgG~~t~~Eal~~GvP~v~~P~~~D-Q~~na~~l~~~G~g~~l~~~~~~~~~l~~ai~~~l-~-~~~~~~a~~~~~ 380 (401)
T d1iira_ 304 AVIHHGGAGTTHVAARAGAPQILLPQMAD-QPYYAGRVAELGVGVAHDGPIPTFDSLSAALATAL-T-PETHARATAVAG 380 (401)
T ss_dssp EEEECCCHHHHHHHHHHTCCEEECCCSTT-HHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHT-S-HHHHHHHHHHHH
T ss_pred EEEecCCchHHHHHHHhCCCEEEcccccc-HHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHh-C-HHHHHHHHHHHH
Confidence 99999999999999999999999997654 566999999999998875 5899999999999 4 556666666665
Q ss_pred hhcCCcHHHHHHHHHHHHHhc
Q 012492 423 KLAQPEAVVDIVKDIHDLAAQ 443 (462)
Q Consensus 423 ~~~~~~~~~~ia~~i~~l~~~ 443 (462)
++.. .+..+.++.|++++.+
T Consensus 381 ~~~~-~~~~~aa~~i~~~i~r 400 (401)
T d1iira_ 381 TIRT-DGAAVAARLLLDAVSR 400 (401)
T ss_dssp HSCS-CHHHHHHHHHHHHHHT
T ss_pred HHHh-cChHHHHHHHHHHHhc
Confidence 5544 5556778888887765
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=99.71 E-value=4.5e-16 Score=151.98 Aligned_cols=278 Identities=14% Similarity=0.091 Sum_probs=174.9
Q ss_pred HHHHHHHHHHhhCCCEEEECCcccchHHH-HHHHHcCCCCCCeEEEEecCCCCC---C-------cccccCCCcEEEEcC
Q 012492 152 YAKEVEAGLMEYKPDIIISVHPLMQHIPL-WVLKWQGLQKKVIFVTVITDLNTC---H-------PTWFHPRVNRCYCPS 220 (462)
Q Consensus 152 ~~~~l~~~l~~~kPDvVi~~~~~~~~~~~-~~~~~~~~~~~iP~v~~~~d~~~~---~-------~~~~~~~~d~~i~~s 220 (462)
....+.+++++.+||+|++.+......+. .++.. .++|++++.....+. . +......+|.++|++
T Consensus 76 ~i~~~~~~~~~~kpD~v~v~GDr~e~la~a~aa~~----~~Ipi~HiegG~~s~~~~~~~~de~~R~~iskls~~hf~~t 151 (377)
T d1o6ca_ 76 ALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFY----HQIAVGHVEAGLRTGNKYSPFPEELNRQMTGAIADLHFAPT 151 (377)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHH----TTCEEEEESCCCCCSCTTTTTTHHHHHHHHHHHCSEEEESS
T ss_pred HHHhhhhhhhhcccceeEeeecccccchhhhhhhh----ccceEEEEecccccccccccCchhhhccccccceeEEeecc
Confidence 44567789999999999998875544322 33333 599998765433211 0 112345689999999
Q ss_pred HHHHHHHHHcCCCCCcEEEcCCCCChhhhcccCChHHHHHHcCCCCCCcEEEEEeCCCCC--ccHHHHHHHHHHhhhccc
Q 012492 221 KEVAKRASYFGLEVSQIRVFGLPIRPSFVRAVISKDNLRLELQMDPILPAVLLMGGGEGM--GPVKETAMALGESLLDKE 298 (462)
Q Consensus 221 ~~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~~~~~~~~r~~l~l~~~~~~iLv~gG~~~~--~~~~~~l~~l~~~l~~~~ 298 (462)
+..++.+.+.|.++.+|.++|+|.-+.+.... .+......+....+.+.+|++...... ......+..+...+..
T Consensus 152 ~~~~~~L~~~G~~~~~I~~vG~~~~D~i~~~~-~~~~~~~~~~~~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~-- 228 (377)
T d1o6ca_ 152 GQAKDNLLKENKKADSIFVTGNTAIDALNTTV-RDGYSHPVLDQVGEDKMILLTAHRRENLGEPMENMFKAIRRIVGE-- 228 (377)
T ss_dssp HHHHHHHHHTTCCGGGEEECCCHHHHHHHHHC-CSSCCCSTTTTTTTSEEEEECC----------HHHHHHHHHHHHH--
T ss_pred hhhhhhhhhhccccceEeeccchhHHHHHHHH-HHHHhhhhhhhccCCceEEEEeccccccccchHHHHHHHHhhccc--
Confidence 99999999999999999999998655443211 111001112222345667776654332 1223334444443332
Q ss_pred CCCCCceEEEEccCCHHHHHHHh-hccCCCCeEEeccc--hhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecCCCC
Q 012492 299 TGRPIGQLIIICGRNRTLASTLQ-SEEWKIPVKVRGFE--TQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPG 375 (462)
Q Consensus 299 ~~~~~~~~lvv~G~~~~l~~~~~-~~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~ 375 (462)
..+..+++....+......+. .+....++.++... .++..+|..|+++|+.||+. +.||..+|+|+|.....+.
T Consensus 229 --~~~~~~i~~~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vIgnSss~-i~Ea~~lg~P~Inir~~tE 305 (377)
T d1o6ca_ 229 --FEDVQVVYPVHLNPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDSGGV-QEEAPSLGKPVLVLRDTTE 305 (377)
T ss_dssp --CTTEEEEEC----CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEEEEC--CH-HHHGGGGTCCEEEECSCCC
T ss_pred --ccccccccccccccccchhhhhccccccceEeccccchHHHHHHHhhhheeecccchh-HHhhhhhhceEEEeCCCCc
Confidence 234444443333333333333 23456789998876 57889999999999999865 6899999999999866444
Q ss_pred ccccchHHHHHCCceeee-CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHhccC
Q 012492 376 QEKGNVPYVVDNGAGVFT-RSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQRG 445 (462)
Q Consensus 376 ~~~~n~~~l~~~G~g~~~-~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~~~~ 445 (462)
+|. -.+.|..+++ .+.+.+.+++..++ .++..++.+.+.-.-+.+..++++|++.|.+.+.-..
T Consensus 306 Rqe-----~~~~g~nilv~~~~~~I~~~i~~~l-~~~~~~~~~~~~~npYGdG~as~rI~~~L~~~~~~~k 370 (377)
T d1o6ca_ 306 RPE-----GVEAGTLKLAGTDEENIYQLAKQLL-TDPDEYKKMSQASNPYGDGEASRRIVEELLFHYGYRK 370 (377)
T ss_dssp --------CTTTTSSEEECSCHHHHHHHHHHHH-HCHHHHHHHHHCCCTTCCSCHHHHHHHHHHHHTTSCS
T ss_pred Ccc-----hhhcCeeEECCCCHHHHHHHHHHHH-hChHHHhhhccCCCCCCCChHHHHHHHHHHHhhCccc
Confidence 443 1345666655 47889999999999 6888888776655557778899999999998776443
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=5.9e-14 Score=136.53 Aligned_cols=274 Identities=16% Similarity=0.148 Sum_probs=176.0
Q ss_pred HHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCC----------cccccCCCcEEEEcCH
Q 012492 152 YAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCH----------PTWFHPRVNRCYCPSK 221 (462)
Q Consensus 152 ~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~----------~~~~~~~~d~~i~~s~ 221 (462)
....+.+++.+.+||+|++.+......+..++... .++|++++.-...+.. +......+|..+|+++
T Consensus 74 ~i~~~~~~~~~~kPD~v~v~GDr~e~la~a~aa~~---~~ipi~HiegG~~s~~~~~~~pde~~R~~iskls~~hf~~~~ 150 (376)
T d1f6da_ 74 ILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFY---QRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTE 150 (376)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHT---TTCCEEEESCCCCCSCTTSSTTHHHHHHHHHHTCSEEEESSH
T ss_pred HHHhhHHHHHhccCcceeeeccccchhhHHHHHHh---hCceEEEEecccccccccccCchhhhhhhhccceeEEEeccH
Confidence 34566788999999999998866544433332222 5999987654321110 1123467899999999
Q ss_pred HHHHHHHHcCCCCCcEEEcCCCCChhhhcc---cCChH-----HHHHHcCCCCCCcEEEEEeCCCCC-c-cHHHHHHHHH
Q 012492 222 EVAKRASYFGLEVSQIRVFGLPIRPSFVRA---VISKD-----NLRLELQMDPILPAVLLMGGGEGM-G-PVKETAMALG 291 (462)
Q Consensus 222 ~~~~~l~~~gi~~~~i~v~g~pv~~~~~~~---~~~~~-----~~r~~l~l~~~~~~iLv~gG~~~~-~-~~~~~l~~l~ 291 (462)
..++.+.+.|.++.+|.++|+|.-+.+... ....+ .......++.+.+++|++...... . ...+++..+
T Consensus 151 ~~~~~L~~~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l- 229 (376)
T d1f6da_ 151 TSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHAL- 229 (376)
T ss_dssp HHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCHHHHHHHHHH-
T ss_pred HHHhHHHhcCCCccccceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCCceEEEecccchhhhhhHHHHHHHH-
Confidence 999999999999999999999865433211 01111 112223445567788888765432 2 223333333
Q ss_pred HhhhcccCCCCCceEEEEccCCHHHHHHHhh-ccCCCCeEEeccc--hhHHHHHHhcchheecCChhhHHHHHHhCCCEE
Q 012492 292 ESLLDKETGRPIGQLIIICGRNRTLASTLQS-EEWKIPVKVRGFE--TQMEKWMGACDCIITKAGPGTIAEALIRGLPII 368 (462)
Q Consensus 292 ~~l~~~~~~~~~~~~lvv~G~~~~l~~~~~~-~~~~~~V~~~g~~--~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI 368 (462)
..+.+. ..++.+++.............+ .....++.+++.. .++..+++.|+++|+.|+++ +.||..+|+|+|
T Consensus 230 ~~~~~~---~~~~~ii~p~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~vignSssg-i~Ea~~lg~P~I 305 (376)
T d1f6da_ 230 ADIATT---HQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDSGGI-QEEAPSLGKPVL 305 (376)
T ss_dssp HHHHHH---CTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESSSGG-GGTGGGGTCCEE
T ss_pred hhhhhh---cceeEEecccccchhhhhhHhhhhcccccceeeccccHHHHHHHHhhceEEEecCcch-HhhHHHhCCCEE
Confidence 233221 2345555555544433222222 2445788887665 46778999999999999864 589999999999
Q ss_pred EecCCCCccccchHHHHHCCceeee-CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHH
Q 012492 369 LNDYIPGQEKGNVPYVVDNGAGVFT-RSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHD 439 (462)
Q Consensus 369 ~~~~~~~~~~~n~~~l~~~G~g~~~-~~~~~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~ 439 (462)
.......++. -.+.|..+.+ .+.+.+.+++.+++ .++..++.+.....-+.+..++++|++.+++
T Consensus 306 nir~~ter~~-----~~~~g~~i~v~~~~~~I~~ai~~~l-~~~~~~~~~~~~~npYGdG~as~rI~~iLk~ 371 (376)
T d1f6da_ 306 VMRDTTERPE-----AVTAGTVRLVGTDKQRIVEEVTRLL-KDENEYQAMSRAHNPYGDGQACSRILEALKN 371 (376)
T ss_dssp ECSSCCSCHH-----HHHHTSEEECCSSHHHHHHHHHHHH-HCHHHHHHHHHSCCTTCCSCHHHHHHHHHHH
T ss_pred EcCCCccCcc-----ceecCeeEECCCCHHHHHHHHHHHH-hChHhhhhhccCCCCCCCChHHHHHHHHHHh
Confidence 8754333332 2345666655 47889999999999 6777766665544456777889999988765
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.60 E-value=4.5e-15 Score=131.39 Aligned_cols=164 Identities=21% Similarity=0.199 Sum_probs=110.1
Q ss_pred hHHHHHHcCCCCCCcEEEEEeCCC-CCccHHHHHHHHHHhhhcccCCCCCceEEEEccCC-HHHHHHHhhc--cCCCCeE
Q 012492 255 KDNLRLELQMDPILPAVLLMGGGE-GMGPVKETAMALGESLLDKETGRPIGQLIIICGRN-RTLASTLQSE--EWKIPVK 330 (462)
Q Consensus 255 ~~~~r~~l~l~~~~~~iLv~gG~~-~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~-~~l~~~~~~~--~~~~~V~ 330 (462)
+..++++++++ +.+.++++|+.. ..+++..++.++ +.+.+.. ..++++++++ |.+ .+.....+.+ .....+.
T Consensus 20 ~~~~~~~~~l~-~~~~il~~Grl~~~~Kg~~~li~a~-~~l~~~~-~~~~~~l~i~-G~g~~~~~~~~~~~~~~~~~~~~ 95 (196)
T d2bfwa1 20 KKSLLSKFGMD-EGVTFMFIGRFDRGQKGVDVLLKAI-EILSSKK-EFQEMRFIII-GKGDPELEGWARSLEEKHGNVKV 95 (196)
T ss_dssp HHHHHHHTTCC-SCEEEEEESCBCSSSSCHHHHHHHH-HHHTTSG-GGGGEEEEEE-CCBCHHHHHHHHHHHHHCTTEEE
T ss_pred HHHHHHHhCCC-CCCEEEEEcCCCccccCHHHHHHHH-Hhhhccc-CCCCeEEEEE-eecccchhhhhhhhhhccceeEE
Confidence 34678899995 555565555432 345666666555 4443211 1366776554 544 3322222221 2334455
Q ss_pred Eeccc--hhHHHHHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeeeC--CHHHHHHH
Q 012492 331 VRGFE--TQMEKWMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTR--SPKETARI 402 (462)
Q Consensus 331 ~~g~~--~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~~la~~ 402 (462)
+.|+. +++..+|+.||++|.++. |.+++|||+||+|+|+++.++ ...+++.+.|++++ ++++++++
T Consensus 96 ~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~------~~e~i~~~~g~~~~~~~~~~l~~~ 169 (196)
T d2bfwa1 96 ITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGG------LRDIITNETGILVKAGDPGELANA 169 (196)
T ss_dssp ECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHH------HHHHCCTTTCEEECTTCHHHHHHH
T ss_pred eeeccccccchhccccccccccccccccccccchhhhhcCceeeecCCCc------cceeecCCceeeECCCCHHHHHHH
Confidence 66766 589999999999998763 899999999999999987532 23345556777664 68999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhhcCCc
Q 012492 403 VTEWFSTKTDELKRMSENALKLAQPE 428 (462)
Q Consensus 403 i~~ll~~d~~~~~~m~~~a~~~~~~~ 428 (462)
|.+++..+++.+++|++++++.+..+
T Consensus 170 i~~~l~~~~~~~~~~~~~a~~~a~~f 195 (196)
T d2bfwa1 170 ILKALELSRSDLSKFRENCKKRAMSF 195 (196)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 99988558999999999999876543
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=99.55 E-value=3.4e-13 Score=133.87 Aligned_cols=173 Identities=17% Similarity=0.159 Sum_probs=110.2
Q ss_pred cCCCCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHH--HHHHHhhccCCCCeEEeccchhHH
Q 012492 262 LQMDPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRT--LASTLQSEEWKIPVKVRGFETQME 339 (462)
Q Consensus 262 l~l~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~--l~~~~~~~~~~~~V~~~g~~~~~~ 339 (462)
+...+..++++++.|+...... +.+.+++..+.+ .+.++++..+.... +.+.. ......|+.+..|.++.
T Consensus 259 ~~~~~~~~~v~~s~gs~~~~~~-~~~~~~~~~~~~-----~~~~vl~~~~~~~~~~l~~~~-~~~~~~nv~~~~~~pq~- 330 (450)
T d2c1xa1 259 LKERKPTSVVYISFGTVTTPPP-AEVVALSEALEA-----SRVPFIWSLRDKARVHLPEGF-LEKTRGYGMVVPWAPQA- 330 (450)
T ss_dssp HHTSCTTCEEEEECCSSCCCCH-HHHHHHHHHHHH-----HTCCEEEECCGGGGGGSCTTH-HHHHTTTEEEESCCCHH-
T ss_pred cccCCccceeeecccccccCCH-HHHHHHHHHHHh-----cCCeEEEEECCCccccCChhh-hhhccccccccccCChH-
Confidence 3333456678888887664332 233333333332 13456766554321 10000 01235689999998654
Q ss_pred HHH--HhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHH-CCceeeeC----CHHHHHHHHHHHhcCCHH
Q 012492 340 KWM--GACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVD-NGAGVFTR----SPKETARIVTEWFSTKTD 412 (462)
Q Consensus 340 ~l~--~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~-~G~g~~~~----~~~~la~~i~~ll~~d~~ 412 (462)
+++ ..+++||+++|.+|+.||+.+|+|+|+.|...+| ..|+..+++ .|+|+.++ +++.+.++|.++| +|+.
T Consensus 331 ~lL~hp~~~~fItHGG~~s~~eal~~GvP~v~~P~~~DQ-~~na~rv~~~~G~G~~l~~~~~t~~~l~~ai~~vL-~d~~ 408 (450)
T d2c1xa1 331 EVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQ-RLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQIL-SQEK 408 (450)
T ss_dssp HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH-HHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHH-HSHH
T ss_pred hhhccCceeEEEccCCccHHHHHHHcCCCEEecccccch-HHHHHHHHHHcCcEEEecCCCcCHHHHHHHHHHHh-cCcH
Confidence 566 6889999999999999999999999999986655 569999987 59999875 5899999999999 6764
Q ss_pred H---HHHH---HHHHHhhc-CCcHHHHHHHHHHHHHhcc
Q 012492 413 E---LKRM---SENALKLA-QPEAVVDIVKDIHDLAAQR 444 (462)
Q Consensus 413 ~---~~~m---~~~a~~~~-~~~~~~~ia~~i~~l~~~~ 444 (462)
. ++++ ++.+++-. ...++.+-+..|.+++.++
T Consensus 409 y~~~~~r~~~l~~~~~~a~~~~gss~~~~~~~~e~v~r~ 447 (450)
T d2c1xa1 409 GKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKP 447 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhhh
Confidence 3 2333 33333322 2344444444555555544
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=99.52 E-value=8.9e-13 Score=130.85 Aligned_cols=169 Identities=18% Similarity=0.180 Sum_probs=104.3
Q ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHH-H-HHHHhhccCCCCeEEeccchhHH-HHH
Q 012492 266 PILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRT-L-ASTLQSEEWKIPVKVRGFETQME-KWM 342 (462)
Q Consensus 266 ~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~-l-~~~~~~~~~~~~V~~~g~~~~~~-~l~ 342 (462)
+....+++..++.......+.+..++..+.. ....+++..+.... . ....+......|+.+..|...-. -.+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~v~~~~pq~~~l~~ 346 (461)
T d2acva1 272 PDKSVVFLCFGSMGVSFGPSQIREIALGLKH-----SGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAH 346 (461)
T ss_dssp CTTCEEEEECCSSCCCCCHHHHHHHHHHHHH-----HTCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHHHHHS
T ss_pred CccceeeeeccccccCCCHHHHHHHHHHHHh-----cCccEEEEeecccccCCccchhhhccCCCeEEEecCCHHHHHhc
Confidence 3344555555554433333444444443332 13456666554431 0 00111112345788887774332 234
Q ss_pred HhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHH-HCCceeeeC----------CHHHHHHHHHHHhcCCH
Q 012492 343 GACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVV-DNGAGVFTR----------SPKETARIVTEWFSTKT 411 (462)
Q Consensus 343 ~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~-~~G~g~~~~----------~~~~la~~i~~ll~~d~ 411 (462)
..||+||+++|.+|+.||+.+|+|+|+.|...+| ..|+..++ +.|+|+.++ +.++++++|.++|++|+
T Consensus 347 p~~~~fItHGG~gs~~eAl~~GVP~l~~P~~~DQ-~~nA~rlve~~G~G~~l~~~~~~~~~~~t~~~l~~a~~~vl~~d~ 425 (461)
T d2acva1 347 KAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQ-QLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS 425 (461)
T ss_dssp TTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTH-HHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTC
T ss_pred ccCCEEEecCCccHHHHHHHcCCCEEeCCcccch-HHHHHHHHHHhCceEEeeccccccCCccCHHHHHHHHHHHhhCCH
Confidence 7999999999999999999999999999987665 45999985 568888763 57899999999994345
Q ss_pred HHHHH---HHHHHHhhcCCc--HHHHHHHHHHHH
Q 012492 412 DELKR---MSENALKLAQPE--AVVDIVKDIHDL 440 (462)
Q Consensus 412 ~~~~~---m~~~a~~~~~~~--~~~~ia~~i~~l 440 (462)
..|++ +++.+++-+++. +...|.+.|+++
T Consensus 426 ~~r~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~ 459 (461)
T d2acva1 426 IVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDI 459 (461)
T ss_dssp THHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHh
Confidence 45544 444455544443 335666666654
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.41 E-value=3.6e-11 Score=119.60 Aligned_cols=274 Identities=11% Similarity=0.025 Sum_probs=164.4
Q ss_pred HHHHHHHHHHHHHHhhCC-CEEEECCcccchHHHHHHHHcCCCCCCeEEEEecCCCCCCcccc-----------cCCCcE
Q 012492 148 MAAYYAKEVEAGLMEYKP-DIIISVHPLMQHIPLWVLKWQGLQKKVIFVTVITDLNTCHPTWF-----------HPRVNR 215 (462)
Q Consensus 148 ~~~~~~~~l~~~l~~~kP-DvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~~~d~~~~~~~~~-----------~~~~d~ 215 (462)
.+..++.++ .+..+| |+|+++.......+.. .+..+ .+.++..+.|...+....+. ...+|.
T Consensus 108 vN~~fA~~l---~~~~~~~d~iwvhDyhl~llp~~-lR~~~--~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~ 181 (456)
T d1uqta_ 108 VNALLADKL---LPLLQDDDIIWIHDYHLLPFAHE-LRKRG--VNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDL 181 (456)
T ss_dssp HHHHHHHHH---GGGCCTTCEEEEESGGGTTHHHH-HHHTT--CCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSE
T ss_pred HHHHHHHHH---HHhccCCCeEEEeccchhhhHHH-HHHhC--CCCcEEEEeCCCCCChHHhccCcchHHHHHHhhcccc
Confidence 344555544 445566 6776666555544433 34333 47787777665432111100 124577
Q ss_pred EEEcCHHHHHHHHH-----cCCC------------CCcEEEcCCCCChhhhcc---cCCh---HHHHHHcCCCCCCcEEE
Q 012492 216 CYCPSKEVAKRASY-----FGLE------------VSQIRVFGLPIRPSFVRA---VISK---DNLRLELQMDPILPAVL 272 (462)
Q Consensus 216 ~i~~s~~~~~~l~~-----~gi~------------~~~i~v~g~pv~~~~~~~---~~~~---~~~r~~l~l~~~~~~iL 272 (462)
+...+....+.+.. .+.. ..++.++++++++..+.. .... .+++.++ .++++|+
T Consensus 182 igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~~~l~~~~---~~~~~il 258 (456)
T d1uqta_ 182 LGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAEL---KNVQNIF 258 (456)
T ss_dssp EEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHT---TTCEEEE
T ss_pred ccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHHHHHHHHHHHhc---CCCeEEE
Confidence 77777666655532 1111 124667788888764432 1111 2333333 3566666
Q ss_pred EEeCCCCCccHHHHHHHHHHhhhcccCCCCC----ceEEEEccCCH-------HHHHHHh-----------hccCCCCeE
Q 012492 273 LMGGGEGMGPVKETAMALGESLLDKETGRPI----GQLIIICGRNR-------TLASTLQ-----------SEEWKIPVK 330 (462)
Q Consensus 273 v~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~----~~~lvv~G~~~-------~l~~~~~-----------~~~~~~~V~ 330 (462)
.+++....|++...++++.+.+.+ +|+ +.++.+++... ++...+. ..++...+.
T Consensus 259 ~V~Rld~~KGi~~~l~A~~~~l~~----~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~ 334 (456)
T d1uqta_ 259 SVERLDYSKGLPERFLAYEALLEK----YPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYY 334 (456)
T ss_dssp EECCBCGGGCHHHHHHHHHHHHHH----CGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEE
T ss_pred EeCCCchhhchHHHHHHHHHHHHh----CccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceee
Confidence 666555567788778776544443 344 33444443321 1222221 124455566
Q ss_pred Eeccc--hhHHHHHHhcchheecCC----hhhHHHHHHhCCC-----EEEecCCCCccccchHHHHHCCceeeeC--CHH
Q 012492 331 VRGFE--TQMEKWMGACDCIITKAG----PGTIAEALIRGLP-----IILNDYIPGQEKGNVPYVVDNGAGVFTR--SPK 397 (462)
Q Consensus 331 ~~g~~--~~~~~l~~~aD~vV~~sg----~~t~~EAla~G~P-----vI~~~~~~~~~~~n~~~l~~~G~g~~~~--~~~ 397 (462)
+.+.. +++..+|+.||+++.+|- +.+++|||+||+| +|+++..+-.+ .+ +.|++++ |++
T Consensus 335 ~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~-----~l---~~g~lVnP~d~~ 406 (456)
T d1uqta_ 335 LNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAAN-----EL---TSALIVNPYDRD 406 (456)
T ss_dssp ECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGG-----TC---TTSEEECTTCHH
T ss_pred ccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHH-----Hh---CCeEEECcCCHH
Confidence 66665 688999999999998873 8999999999999 88887643222 22 2255554 899
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHh
Q 012492 398 ETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAA 442 (462)
Q Consensus 398 ~la~~i~~ll~~d~~~~~~m~~~a~~~~~~~~~~~ia~~i~~l~~ 442 (462)
+++++|.++|+.+++.|+++.+++++.+.++++..-++.+.+-++
T Consensus 407 ~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~ 451 (456)
T d1uqta_ 407 EVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLK 451 (456)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 999999999955788999999999999887776665555555444
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=99.40 E-value=3.5e-11 Score=119.38 Aligned_cols=138 Identities=14% Similarity=0.181 Sum_probs=95.3
Q ss_pred CCCCcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEccCCHH------HHHHHhhccCCCCeEEeccchhH
Q 012492 265 DPILPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIICGRNRT------LASTLQSEEWKIPVKVRGFETQM 338 (462)
Q Consensus 265 ~~~~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~~------l~~~~~~~~~~~~V~~~g~~~~~ 338 (462)
......+++++|+.+.... +....++..+.+ ...+++++.+.... +..... .....|+.+..|.++
T Consensus 285 ~~~~~~v~~~~gs~~~~~~-~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~Nv~~~~~~Pq- 356 (473)
T d2pq6a1 285 KEPGSVVYVNFGSTTVMTP-EQLLEFAWGLAN-----CKKSFLWIIRPDLVIGGSVIFSSEFT-NEIADRGLIASWCPQ- 356 (473)
T ss_dssp SCTTCEEEEECCSSSCCCH-HHHHHHHHHHHH-----TTCEEEEECCGGGSTTTGGGSCHHHH-HHHTTTEEEESCCCH-
T ss_pred cCCCceeeeccCccccccH-HHHHHHHHHHHh-----cCCeEEEEEccCCcccccccCcccch-hhccCceEEeeeCCH-
Confidence 3445566777777654332 222333333322 13467777654431 111110 123579999999975
Q ss_pred HHHH--HhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHH-CCceeeeC---CHHHHHHHHHHHhcCCHH
Q 012492 339 EKWM--GACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVD-NGAGVFTR---SPKETARIVTEWFSTKTD 412 (462)
Q Consensus 339 ~~l~--~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~-~G~g~~~~---~~~~la~~i~~ll~~d~~ 412 (462)
.+++ ..|++||+++|.+|+.||+.+|+|+|+.|...+| ..|+..+++ .|+|+.++ +.++++++|.++| +|+.
T Consensus 357 ~~lL~hp~~~~fItHGG~~s~~Eal~~GVP~lv~P~~~DQ-~~na~rv~~~~G~G~~l~~~~t~~~l~~ai~~vl-~d~~ 434 (473)
T d2pq6a1 357 DKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQ-PTDCRFICNEWEIGMEIDTNVKREELAKLINEVI-AGDK 434 (473)
T ss_dssp HHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH-HHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHH-TSHH
T ss_pred HHHhcCCcCcEEEecCCccHHHHHHHcCCCEEeccchhhh-HHHHHHHHHHcCeEEeeCCCcCHHHHHHHHHHHH-cCCh
Confidence 4567 6899999999999999999999999999987665 559999865 59998876 6899999999999 6875
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.37 E-value=3.5e-12 Score=109.27 Aligned_cols=141 Identities=16% Similarity=0.034 Sum_probs=93.3
Q ss_pred CcEEEEEeCCCCCccHHHHHHHHHHhhhcccCCCCCceEEEEc-cCC-HH---HHHHHhhccCCCCeEEeccc--hhHHH
Q 012492 268 LPAVLLMGGGEGMGPVKETAMALGESLLDKETGRPIGQLIIIC-GRN-RT---LASTLQSEEWKIPVKVRGFE--TQMEK 340 (462)
Q Consensus 268 ~~~iLv~gG~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~lvv~-G~~-~~---l~~~~~~~~~~~~V~~~g~~--~~~~~ 340 (462)
..++|++|.....++...+++ +++.++ +.++++++ |.. +. +.+.+.+. ..++|+|.|++ +++..
T Consensus 12 ~~~~l~iGrl~~~K~~~~~i~-a~~~l~-------~~~l~ivg~~~~~~~~~~~~~~~~~~-~~~~v~~~g~~~~~~~~~ 82 (166)
T d2f9fa1 12 GDFWLSVNRIYPEKRIELQLE-VFKKLQ-------DEKLYIVGWFSKGDHAERYARKIMKI-APDNVKFLGSVSEEELID 82 (166)
T ss_dssp CSCEEEECCSSGGGTHHHHHH-HHHHCT-------TSCEEEEBCCCTTSTHHHHHHHHHHH-SCTTEEEEESCCHHHHHH
T ss_pred CCEEEEEecCccccCHHHHHH-HHHHhc-------CCeEEEEEecccccchhhhhhhhccc-ccCcEEEeeccccccccc
Confidence 345665554444455555554 445553 44555543 222 11 33333332 45699999998 67999
Q ss_pred HHHhcchheecCC----hhhHHHHHHhCCCEEEecCCCCccccchHHHHHCCceeee-CCHHHHHHHHHHHhcCCHH-HH
Q 012492 341 WMGACDCIITKAG----PGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFT-RSPKETARIVTEWFSTKTD-EL 414 (462)
Q Consensus 341 l~~~aD~vV~~sg----~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~~G~g~~~-~~~~~la~~i~~ll~~d~~-~~ 414 (462)
+|+.||++|.+|. |.+++|||++|+|+|+++..+ ..+.+.+...|+++ .++++++++|.+++ +|++ .+
T Consensus 83 ~~~~ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~-----~~e~i~~~~~g~~~~~d~~~~~~~i~~l~-~~~~~~~ 156 (166)
T d2f9fa1 83 LYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGG-----FKETVINEKTGYLVNADVNEIIDAMKKVS-KNPDKFK 156 (166)
T ss_dssp HHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHH-----HHHHCCBTTTEEEECSCHHHHHHHHHHHH-HCTTTTH
T ss_pred ccccccccccccccccccccccccccccccceeecCCc-----ceeeecCCcccccCCCCHHHHHHHHHHHH-hCHHHHH
Confidence 9999999998873 889999999999999998632 22233344567766 47999999999999 5654 56
Q ss_pred HHHHHHHHh
Q 012492 415 KRMSENALK 423 (462)
Q Consensus 415 ~~m~~~a~~ 423 (462)
+.+.++|++
T Consensus 157 ~~~~~~a~~ 165 (166)
T d2f9fa1 157 KDCFRRAKE 165 (166)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhC
Confidence 666666665
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.28 E-value=3e-10 Score=112.43 Aligned_cols=85 Identities=20% Similarity=0.239 Sum_probs=71.7
Q ss_pred CCCCeEEeccchhHHHHH--HhcchheecCChhhHHHHHHhCCCEEEecCCCCccccchHHHHH-CCceeeeC-------
Q 012492 325 WKIPVKVRGFETQMEKWM--GACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVD-NGAGVFTR------- 394 (462)
Q Consensus 325 ~~~~V~~~g~~~~~~~l~--~~aD~vV~~sg~~t~~EAla~G~PvI~~~~~~~~~~~n~~~l~~-~G~g~~~~------- 394 (462)
..+||.+.+|+++. ++| ..+++||+++|.+|+.||+.+|+|+|+.|...+| ..|+..+++ .|+|+.+.
T Consensus 332 ~~~nv~~~~w~Pq~-~lL~hp~~~~fVtHGG~gS~~EAl~~GvP~v~~P~~~DQ-~~nA~rv~e~lG~Gv~l~~~~~~~~ 409 (471)
T d2vcha1 332 KKRGFVIPFWAPQA-QVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQ-KMNAVLLSEDIRAALRPRAGDDGLV 409 (471)
T ss_dssp TTTEEEEESCCCHH-HHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH-HHHHHHHHHTTCCEECCCCCTTSCC
T ss_pred cCCCeeecccCCHH-HHhcCccCCEEEecCCccHHHHHHHcCCCEEEccccccc-HHHHHHHHHHheeEEEEecCCCCcC
Confidence 35789999999764 688 5899999999999999999999999999987665 459999866 59998662
Q ss_pred CHHHHHHHHHHHhcCCHH
Q 012492 395 SPKETARIVTEWFSTKTD 412 (462)
Q Consensus 395 ~~~~la~~i~~ll~~d~~ 412 (462)
+.+++.++|.++| +|++
T Consensus 410 t~~~l~~ai~~vl-~~~~ 426 (471)
T d2vcha1 410 RREEVARVVKGLM-EGEE 426 (471)
T ss_dssp CHHHHHHHHHHHH-TSTH
T ss_pred CHHHHHHHHHHHh-CCcH
Confidence 5789999999999 6754
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=98.01 E-value=7.4e-05 Score=69.97 Aligned_cols=111 Identities=15% Similarity=0.147 Sum_probs=66.6
Q ss_pred HHHHHHcCCCCCCcEEEEEeCCC-CC-cc-HHHHHHHHHHhhhcccCCCCCceEEEEccCCH-HHHHHHhhc---cCCCC
Q 012492 256 DNLRLELQMDPILPAVLLMGGGE-GM-GP-VKETAMALGESLLDKETGRPIGQLIIICGRNR-TLASTLQSE---EWKIP 328 (462)
Q Consensus 256 ~~~r~~l~l~~~~~~iLv~gG~~-~~-~~-~~~~l~~l~~~l~~~~~~~~~~~~lvv~G~~~-~l~~~~~~~---~~~~~ 328 (462)
....+++++..+++.+++..|+. +. +. -.+.+.++++.+.++ +.++++++|..+ +..+.+.+. ....+
T Consensus 168 ~~~~~~~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~-----~~~ivl~g~~~e~~~~~~~~~~~~~~~~~~ 242 (348)
T d1pswa_ 168 SYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE-----GYQVVLFGSAKDHEAGNEILAALNTEQQAW 242 (348)
T ss_dssp HHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT-----TCEEEECCCGGGHHHHHHHHTTSCHHHHTT
T ss_pred HHHHHHhccccCCCeEEeccccchhhccccchHHHhhhHHHHhhc-----CCccccccccchHHHHHHHHHhhhcccccc
Confidence 34556778877788887766543 32 21 123344566666542 345555444443 233333221 01123
Q ss_pred e-EEecc--chhHHHHHHhcchheecCChhhHHHHHHhCCCEEEecC
Q 012492 329 V-KVRGF--ETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDY 372 (462)
Q Consensus 329 V-~~~g~--~~~~~~l~~~aD~vV~~sg~~t~~EAla~G~PvI~~~~ 372 (462)
+ .+.|- ..++..+++.||++|+..+| .+--|.++|+|+|+.-.
T Consensus 243 ~~~l~g~~sl~el~~li~~a~l~I~~Dtg-~~HlAaa~g~p~i~lfg 288 (348)
T d1pswa_ 243 CRNLAGETQLDQAVILIAACKAIVTNDSG-LMHVAAALNRPLVALYG 288 (348)
T ss_dssp EEECTTTSCHHHHHHHHHTSSEEEEESSH-HHHHHHHTTCCEEEEES
T ss_pred cccccCCccHHHHHHHHhcceeEeecCcc-HHHHHHHcCCCEEEEEC
Confidence 3 33443 36888999999999997764 45889999999999853
|
| >d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/glutamate racemase family: Aspartate/glutamate racemase domain: Glutamate racemase species: Aquifex pyrophilus [TaxId: 2714]
Probab=96.31 E-value=0.02 Score=42.68 Aligned_cols=92 Identities=18% Similarity=0.192 Sum_probs=56.9
Q ss_pred CeEEEEecCCCchHHHHHHHHHHHHhhhcCCceEEEEEeccccccCCCchhhHHHHHHHHhhhHHHHHHhhcCCcchhhH
Q 012492 63 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHS 142 (462)
Q Consensus 63 ~kIli~~~~~G~Gh~~~a~aLa~~L~~~g~~~~~v~v~d~~~~~~~~~~~~~~~~y~~~~~~~~l~~~~~~~~~~~~~~~ 142 (462)
|||.++=+|.| | +.+.++|++..|+...+++.|.. ..||..+.-+.
T Consensus 1 mkIgifDSGiG-G-----LtVl~~l~~~lP~~~~iY~~D~a--~~PYG~ks~~~-------------------------- 46 (105)
T d1b74a1 1 MKIGIFDSGVG-G-----LTVLKAIRNRYRKVDIVYLGDTA--RVPYGIRSKDT-------------------------- 46 (105)
T ss_dssp CEEEEEESSST-H-----HHHHHHHHHHSSSCEEEEEECGG--GCCGGGSCHHH--------------------------
T ss_pred CEEEEEeCCCC-H-----HHHHHHHHHHCCCCCEEEEecCC--CCCCCCCCHHH--------------------------
Confidence 79999999996 5 55667777777776677888743 12322221100
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCEEEECCcccchHHHHHHHHcCCCCCCeEEEE
Q 012492 143 CYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQGLQKKVIFVTV 197 (462)
Q Consensus 143 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~~~~~~~~~~~~~~~~~~~~iP~v~~ 197 (462)
-..+..++.+++.+.++|+|+.-....+...+...+.. ..+|++.+
T Consensus 47 ------I~~~~~~~~~~l~~~~~~~iViACNTaS~~al~~lr~~---~~~PiiGv 92 (105)
T d1b74a1 47 ------IIRYSLECAGFLKDKGVDIIVVACNTASAYALERLKKE---INVPVFGV 92 (105)
T ss_dssp ------HHHHHHHHHHHHHTTTCSEEEECCHHHHHHHHHHHHHH---SSSCEEES
T ss_pred ------HHHHHHHHHHHHHHcCCCEEEEecCcHHHHHHHHHHHH---CCCCEEEe
Confidence 01223345677889999999876655444434444433 47898763
|
| >d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein TM1055 species: Thermotoga maritima [TaxId: 2336]
Probab=94.28 E-value=0.075 Score=43.47 Aligned_cols=70 Identities=17% Similarity=0.168 Sum_probs=41.1
Q ss_pred hhHHHHHHhcchheecC-ChhhHH---HHHHhCCCEEEecCCCCccccchHHHHHCC--------ceeeeCCHHHHHHHH
Q 012492 336 TQMEKWMGACDCIITKA-GPGTIA---EALIRGLPIILNDYIPGQEKGNVPYVVDNG--------AGVFTRSPKETARIV 403 (462)
Q Consensus 336 ~~~~~l~~~aD~vV~~s-g~~t~~---EAla~G~PvI~~~~~~~~~~~n~~~l~~~G--------~g~~~~~~~~la~~i 403 (462)
+....++..||++|.-+ |.+|+. |++..++|+|+.+..+.....-...+.+.| ...++++++++.+.|
T Consensus 88 ~Rk~~m~~~sda~I~lPGG~GTl~El~~a~~l~KPiilln~~g~w~~~i~~~~~~~~~i~~~~~~~i~~~~~~ee~~~~l 167 (170)
T d1rcua_ 88 MRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEAVQII 167 (170)
T ss_dssp HHHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESSHHHHHHHH
T ss_pred hhHHHHhhcccceeeeccccchHHHHHHHHHhCCceEEecCCCchHHHHHHHHHHCCCCCHHHcCeEEEeCCHHHHHHHH
Confidence 44456789999977544 566754 588999999998754321110111111222 233566777777766
Q ss_pred HH
Q 012492 404 TE 405 (462)
Q Consensus 404 ~~ 405 (462)
++
T Consensus 168 ~~ 169 (170)
T d1rcua_ 168 EQ 169 (170)
T ss_dssp HT
T ss_pred Hc
Confidence 54
|
| >d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein YvdD species: Bacillus subtilis [TaxId: 1423]
Probab=89.44 E-value=3.4 Score=33.28 Aligned_cols=38 Identities=29% Similarity=0.274 Sum_probs=26.0
Q ss_pred hhHHHHHHhcchhee-cCChhhHHH---HHHhC------CCEEEecCC
Q 012492 336 TQMEKWMGACDCIIT-KAGPGTIAE---ALIRG------LPIILNDYI 373 (462)
Q Consensus 336 ~~~~~l~~~aD~vV~-~sg~~t~~E---Ala~G------~PvI~~~~~ 373 (462)
+....++..||+||. |+|.+|+-| ++... +|+++.+..
T Consensus 89 ~Rk~~m~~~sdafI~lPGG~GTLdEl~e~l~~~ql~~~~kPiil~n~~ 136 (179)
T d1t35a_ 89 ERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVN 136 (179)
T ss_dssp HHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGG
T ss_pred HHHHHHHHhcCeEEEecCccchhhHHHHHHHHHHhhccCCCeEeecCC
Confidence 444567788999775 556778655 55443 899998753
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=87.88 E-value=0.23 Score=37.53 Aligned_cols=43 Identities=14% Similarity=0.201 Sum_probs=30.7
Q ss_pred CCCCeEEEEecC---CCchHH--HHHHHHHHHHhhhcCCceEEEEEecccc
Q 012492 60 ERTKNVLILMSD---TGGGHR--ASAEAIRDAFKIEFGDEYRIFVKDVCKE 105 (462)
Q Consensus 60 ~~~~kIli~~~~---~G~Gh~--~~a~aLa~~L~~~g~~~~~v~v~d~~~~ 105 (462)
+..+||++++++ .|.|.+ ..+...+++|++.| +++++++..++
T Consensus 2 t~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g---~~~IliN~NPe 49 (121)
T d1a9xa4 2 TDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDG---YETIMVNCNPE 49 (121)
T ss_dssp SSSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTT---CEEEEECCCTT
T ss_pred CCCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcC---CeEEEEecChh
Confidence 345799999754 665554 45668889999986 68888865544
|
| >d2q4oa1 c.129.1.1 (A:8-190) Hypothetical protein At2g37210/T2N18.3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein At2g37210/T2N18.3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=87.62 E-value=5 Score=32.30 Aligned_cols=38 Identities=24% Similarity=0.330 Sum_probs=26.2
Q ss_pred hhHHHHHHhcchhee-cCChhhHHH---HH------HhCCCEEEecCC
Q 012492 336 TQMEKWMGACDCIIT-KAGPGTIAE---AL------IRGLPIILNDYI 373 (462)
Q Consensus 336 ~~~~~l~~~aD~vV~-~sg~~t~~E---Al------a~G~PvI~~~~~ 373 (462)
+....++..||+||. |+|.+|+-| ++ ...+|+++.+..
T Consensus 94 ~Rk~~m~~~sdafIvlPGG~GTLdEl~e~lt~~ql~~~~kpiiiln~~ 141 (183)
T d2q4oa1 94 QRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD 141 (183)
T ss_dssp HHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHHTSCCCCEEEECGG
T ss_pred HHHHHHHHhCceEEEeCCcchhHHHHHHHHHHHHhcCCCCCeEEeecC
Confidence 455678889998775 556778755 44 236898888753
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=83.36 E-value=0.43 Score=36.42 Aligned_cols=41 Identities=24% Similarity=0.271 Sum_probs=29.3
Q ss_pred CCCeEEEEecC---CCch--HHHHHHHHHHHHhhhcCCceEEEEEeccc
Q 012492 61 RTKNVLILMSD---TGGG--HRASAEAIRDAFKIEFGDEYRIFVKDVCK 104 (462)
Q Consensus 61 ~~~kIli~~~~---~G~G--h~~~a~aLa~~L~~~g~~~~~v~v~d~~~ 104 (462)
..+||++++++ .|.| .-..+...+.+|++.| +++++++-.+
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g---~~~iliN~NP 51 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEG---YRVINVNSNP 51 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHT---CEEEEECSCT
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcC---CeEEEecCch
Confidence 45799999754 4444 4556778889999986 5778776544
|
| >d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein At5g11950 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=83.06 E-value=8.6 Score=30.75 Aligned_cols=40 Identities=18% Similarity=0.229 Sum_probs=27.3
Q ss_pred cchhHHHHHHhcchhee-cCChhhHHH---HH------HhCCCEEEecCC
Q 012492 334 FETQMEKWMGACDCIIT-KAGPGTIAE---AL------IRGLPIILNDYI 373 (462)
Q Consensus 334 ~~~~~~~l~~~aD~vV~-~sg~~t~~E---Al------a~G~PvI~~~~~ 373 (462)
+.+....++..||+||. |+|.+|+-| ++ ...+|+++.+..
T Consensus 88 ~~~Rk~~m~~~sdafIvlPGG~GTLdEl~e~l~l~ql~~~~kpiiiln~~ 137 (181)
T d1ydhb_ 88 MHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVD 137 (181)
T ss_dssp HHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGG
T ss_pred HHHHHHHHHHhCeeEEEeCCccchHHHHHHHHHHHHhcccCCCeEEEecC
Confidence 33566678899999775 556777655 44 356888887653
|
| >d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: LmbE-like superfamily: LmbE-like family: LmbE-like domain: Hypothetical protein TT1542 species: Thermus thermophilus [TaxId: 274]
Probab=81.30 E-value=1.7 Score=36.65 Aligned_cols=22 Identities=9% Similarity=0.247 Sum_probs=18.1
Q ss_pred HHHHHHHHHhhCCCEEEECCcc
Q 012492 153 AKEVEAGLMEYKPDIIISVHPL 174 (462)
Q Consensus 153 ~~~l~~~l~~~kPDvVi~~~~~ 174 (462)
...|.+++++++||+|+++++.
T Consensus 84 ~~~l~~~i~~~~PdiV~t~~~~ 105 (227)
T d1uana_ 84 RLKLAQALRRLRPRVVFAPLEA 105 (227)
T ss_dssp HHHHHHHHHHHCEEEEEEECSC
T ss_pred hhhhhhheecccccEEEecCcc
Confidence 4467788999999999997764
|