Citrus Sinensis ID: 012522
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 461 | 2.2.26 [Sep-21-2011] | |||||||
| Q56WD9 | 462 | 3-ketoacyl-CoA thiolase 2 | yes | no | 1.0 | 0.997 | 0.781 | 0.0 | |
| Q8LF48 | 443 | 3-ketoacyl-CoA thiolase 1 | no | no | 0.960 | 1.0 | 0.766 | 0.0 | |
| Q570C8 | 457 | 3-ketoacyl-CoA thiolase 5 | no | no | 0.980 | 0.989 | 0.728 | 0.0 | |
| Q921H8 | 424 | 3-ketoacyl-CoA thiolase A | yes | no | 0.908 | 0.988 | 0.572 | 1e-133 | |
| P07871 | 424 | 3-ketoacyl-CoA thiolase B | yes | no | 0.911 | 0.990 | 0.571 | 1e-133 | |
| Q8VCH0 | 424 | 3-ketoacyl-CoA thiolase B | yes | no | 0.911 | 0.990 | 0.574 | 1e-132 | |
| P21775 | 424 | 3-ketoacyl-CoA thiolase A | yes | no | 0.911 | 0.990 | 0.564 | 1e-131 | |
| P09110 | 424 | 3-ketoacyl-CoA thiolase, | yes | no | 0.911 | 0.990 | 0.555 | 1e-129 | |
| Q05493 | 414 | 3-ketoacyl-CoA thiolase, | yes | no | 0.822 | 0.915 | 0.546 | 1e-105 | |
| P33291 | 408 | 3-ketoacyl-CoA thiolase B | N/A | no | 0.822 | 0.928 | 0.498 | 9e-99 |
| >sp|Q56WD9|THIK2_ARATH 3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/462 (78%), Positives = 410/462 (88%), Gaps = 1/462 (0%)
Query: 1 MEKALHRQRILLQHLQPSSSQTSDSPA-ISASICSAGEAAGYHRKPAFDDDVVIVAAYRT 59
MEKA+ RQR+LL+HL+PSSS + + A +SAS C AG++A Y R + DDVVIVAA+RT
Sbjct: 1 MEKAIERQRVLLEHLRPSSSSSHNYEASLSASACLAGDSAAYQRTSLYGDDVVIVAAHRT 60
Query: 60 AICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAA 119
+CK+KRG FKDT DDLLAPVL+A+IEKT LNPSEVGDIVVGTVLAPGS RA ECRMAA
Sbjct: 61 PLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAA 120
Query: 120 FYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVN 179
FYAGFPETV +RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N ++ G VN
Sbjct: 121 FYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVN 180
Query: 180 PKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIP 239
P V+ F QA++CLLPMG+TSENVAQRFGV+RQEQD AAV+SHR+AAAATA+GKFKDEIIP
Sbjct: 181 PAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
Query: 240 VNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGA 299
V TK+VDPKTG EK +T+SVDDGIRP TT+A L KLKP FKKDGTTTAGN+SQVSDGAGA
Sbjct: 241 VKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGA 300
Query: 300 VLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI 359
VLLMKRS+A+QKGLP+LGVFR+F+AVGVDP++MGIGPAVAIPAAVK+AGL++DDI+LFEI
Sbjct: 301 VLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEI 360
Query: 360 NEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFG 419
NEAFASQ+VYC KLGLDPEK+NVNGGA+A+GHPLGATGARCVATLL EMKRRGKDCRFG
Sbjct: 361 NEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFG 420
Query: 420 VISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTHLSKDAK 461
V+SMCIG+GMGAAAVFERGD VDEL NAR V LSKDA+
Sbjct: 421 VVSMCIGTGMGAAAVFERGDGVDELRNARKVEAQGLLSKDAR 462
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Involved in long chain fatty-acid beta-oxidation prior to gluconeogenesis during germination and subsequent seedling growth. Confers sensitivity to 2,4-dichlorophenoxybutiric acid (2,4-DB). Required for local and systemic induction of jasmonic acid (JA) biosynthesis after wounding. Seems to be involved in JA biosynthesis during senescence. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 6 |
| >sp|Q8LF48|THIK1_ARATH 3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/450 (76%), Positives = 393/450 (87%), Gaps = 7/450 (1%)
Query: 1 MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
MEKA RQRILL+HLQPSSS + ++SAS C + ++A Y + DDVVIVAA RTA
Sbjct: 1 MEKATERQRILLRHLQPSSSSDA---SLSASACLSKDSAAYQ----YGDDVVIVAAQRTA 53
Query: 61 ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
+CKAKRG FKDT D+LLA VL+A+IEKT +NPSEVGDIVVGTVL PGS RA ECRMAAF
Sbjct: 54 LCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVGTVLGPGSQRASECRMAAF 113
Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
YAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N G VNP
Sbjct: 114 YAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPRGWKGSVNP 173
Query: 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240
V+ F QA +CLLPMGITSENVA RF V+R+EQD AAV+SHR+AA+ATASGKFKDEI PV
Sbjct: 174 NVKKFEQAHNCLLPMGITSENVAHRFNVSREEQDQAAVDSHRKAASATASGKFKDEITPV 233
Query: 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
TKIVDPKTG EK +T+SVDDGIRPNTT++ LAKLKP FK+DGTTTAGN+SQ+SDGAGAV
Sbjct: 234 KTKIVDPKTGDEKPITVSVDDGIRPNTTLSGLAKLKPVFKEDGTTTAGNSSQLSDGAGAV 293
Query: 301 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360
LLM+R++A+QKGLPILGVFR+FSAVGVDP++MG+GPAVAIPAAVK+AGL+++D++LFEIN
Sbjct: 294 LLMRRNVAMQKGLPILGVFRTFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDVDLFEIN 353
Query: 361 EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGV 420
EAFASQ+VYC KLGLD EK+NVNGGA+A+GHPLGATGARCVATLL EMKRRGKDCRFGV
Sbjct: 354 EAFASQFVYCRNKLGLDAEKINVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRFGV 413
Query: 421 ISMCIGSGMGAAAVFERGDCVDELCNARMV 450
+SMCIGSGMGAAAVFERG VDELC+ R V
Sbjct: 414 VSMCIGSGMGAAAVFERGGGVDELCDVRKV 443
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Involved in fatty-acid beta-oxidation prior to gluconeogenesis during germination and subsequent seedling growth. Implicated in jasmonic acid (JA) biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|Q570C8|THIK5_ARATH 3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/460 (72%), Positives = 389/460 (84%), Gaps = 8/460 (1%)
Query: 1 MEKALHRQRILLQHLQPSSSQTSD---SPAISASICSAGEAAGYHRKPAFDDDVVIVAAY 57
ME+A+ RQ+ILL+HL P SS S P++ + + E + AF DD+VIVAAY
Sbjct: 1 MERAMERQKILLRHLNPVSSSNSSLKHEPSLLSPVNCVSEVSPM---AAFGDDIVIVAAY 57
Query: 58 RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRM 117
RTAICKA+RGGFKDTL DDLLA VLKAV+E+T L+PSEVGDIVVGTV+APGS RAMECR+
Sbjct: 58 RTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPGSQRAMECRV 117
Query: 118 AAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG- 176
AA++AGFP++VP+RTVNRQCSSGLQAVADVA +I+AG YDIGI AG+ESM+ + I G
Sbjct: 118 AAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMSTDHIPGGGF 177
Query: 177 -QVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKD 235
NP+ + F +ARDCLLPMGITSENVA+RFGVTR+EQD+AAVESH+RAAAA ASGK KD
Sbjct: 178 HGSNPRAQDFPKARDCLLPMGITSENVAERFGVTREEQDMAAVESHKRAAAAIASGKLKD 237
Query: 236 EIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSD 295
EIIPV TKIVDP+T EK + +SVDDG+RPN+ +ADLAKLK FK++G+TTAGNASQ+SD
Sbjct: 238 EIIPVATKIVDPETKAEKAIVVSVDDGVRPNSNMADLAKLKTVFKQNGSTTAGNASQISD 297
Query: 296 GAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIN 355
GAGAVLLMKRSLA++KGLPILGVFRSF+ GV+PSVMGIGPAVAIPAA K AGL + DI+
Sbjct: 298 GAGAVLLMKRSLAMKKGLPILGVFRSFAVTGVEPSVMGIGPAVAIPAATKLAGLNVSDID 357
Query: 356 LFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKD 415
LFEINEAFASQYVY KKL LD EKVNVNGGA+A+GHPLGATGARCVATLL EMKRRGKD
Sbjct: 358 LFEINEAFASQYVYSCKKLELDMEKVNVNGGAIAIGHPLGATGARCVATLLHEMKRRGKD 417
Query: 416 CRFGVISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTH 455
CRFGVISMCIG+GMGAAAVFERGD VD L NAR+ +H
Sbjct: 418 CRFGVISMCIGTGMGAAAVFERGDSVDNLSNARVANGDSH 457
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Probably involved in long chain fatty-acid beta-oxidation prior to gluconeogenesis during germination and subsequent seedling growth. Involved in systemic jasmonic acid (JA) biosynthesis after wounding and may be during senescence. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|Q921H8|THIKA_MOUSE 3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 476 bits (1225), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/433 (57%), Positives = 325/433 (75%), Gaps = 14/433 (3%)
Query: 5 LHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKP-AFDDDVVIVAAYRTAICK 63
+HR +++L HL + + S A+ A+ CSA R P A DVV+V RT I +
Sbjct: 1 MHRLQVVLGHL---AGRPESSSALQAAPCSA-------RFPQASASDVVVVHGRRTPIGR 50
Query: 64 AKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAG 123
A RGGFK+T D+LL+ VL AV++ RL P ++GDI VG VL PG+ M R+A F +G
Sbjct: 51 ASRGGFKNTTPDELLSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAGAVM-ARIAQFLSG 109
Query: 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVE 183
PETVPL TVNRQCSSGLQAVA++A I+ G YDIG+A G+ESM+++ + G ++ ++
Sbjct: 110 IPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSLSGMGNPGNISSRLL 169
Query: 184 IFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTK 243
+ARDCL PMG+TSENVA+RFG++RQ+QD A+ S ++AA+A + G F+ EI+PV T
Sbjct: 170 ESEKARDCLTPMGMTSENVAERFGISRQKQDDFALASQQKAASAQSRGCFRAEIVPVTTT 229
Query: 244 IVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLM 303
++D K G +K +T+S D+G+RP+TT+ LAKLKPAFK G+TTAGN+SQVSDGA AVLL
Sbjct: 230 VLDDK-GDKKTITVSQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLA 288
Query: 304 KRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAF 363
+RS A + GLPILGV RS++ VGV P VMGIGPA AIPAA++ AGL ++DI++FEINEAF
Sbjct: 289 RRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAF 348
Query: 364 ASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISM 423
ASQ VYC++KLG+ EKVN GGA+ALGHPLG TGAR V TLL+E+KRRG+ +GV+SM
Sbjct: 349 ASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSM 407
Query: 424 CIGSGMGAAAVFE 436
CIG+GMGAAAVFE
Sbjct: 408 CIGTGMGAAAVFE 420
|
Mus musculus (taxid: 10090) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|P07871|THIKB_RAT 3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2 | Back alignment and function description |
|---|
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/432 (57%), Positives = 323/432 (74%), Gaps = 12/432 (2%)
Query: 5 LHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKA 64
+HR +++L HL + ++ S A+ A+ CSAG A DVV+V RT I +A
Sbjct: 1 MHRLQVVLGHL---AGRSESSSALQAAPCSAG------FPQASASDVVVVHGRRTPIGRA 51
Query: 65 KRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF 124
RGGFKDT D+LL+ VL AV++ +L P +GDI VG VL PG+ AM R+A F +G
Sbjct: 52 GRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLQPGAGAAM-ARIAQFLSGI 110
Query: 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEI 184
PETVPL VNRQCSSGLQAVA++A I+ G YDIG+A G+ESMT++ G ++ ++
Sbjct: 111 PETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTLSERGNPGNISSRLLE 170
Query: 185 FTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKI 244
+ARDCL+PMGITSENVA+RFG++RQ+QD A+ S ++AA+A + G F+ EI+PV T +
Sbjct: 171 NEKARDCLIPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTTV 230
Query: 245 VDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMK 304
+D K G K +T+S D+G+RP+TT+ LAKLKPAFK G+TTAGN+SQVSDGA AVLL +
Sbjct: 231 LDDK-GDRKTITVSQDEGVRPSTTMEGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLAR 289
Query: 305 RSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFA 364
RS A + GLPILGV RS++ VGV P +MGIGPA AIPAA++ AGL ++DI++FEINEAFA
Sbjct: 290 RSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFA 349
Query: 365 SQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMC 424
SQ +YC++KLG+ EKVN GGA+ALGHPLG TGAR V TLL+E+KRRG+ +GV+SMC
Sbjct: 350 SQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMC 408
Query: 425 IGSGMGAAAVFE 436
IG+GMGAAAVFE
Sbjct: 409 IGTGMGAAAVFE 420
|
Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|Q8VCH0|THIKB_MOUSE 3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1 | Back alignment and function description |
|---|
Score = 473 bits (1218), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/432 (57%), Positives = 323/432 (74%), Gaps = 12/432 (2%)
Query: 5 LHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKA 64
+HR +++L HL + + S A+ A+ CSAG A DVV+V RT I +A
Sbjct: 1 MHRLQVVLGHL---AGRPESSSALQAAPCSAGFLQ------ASASDVVVVHGRRTPIGRA 51
Query: 65 KRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF 124
RG FKDT D+LL+ VL AV++ +L P ++GDI VG VL PG+ A+ R+A F +G
Sbjct: 52 SRGCFKDTTPDELLSAVLTAVLQDVKLKPEQLGDISVGNVLQPGAG-AIMARIAQFLSGI 110
Query: 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEI 184
PETVPL TVNRQCSSGLQAVA++A I+ G YDIG+A G+ESMT++ G ++ ++
Sbjct: 111 PETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTLSQRGNHGNISSRLLE 170
Query: 185 FTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKI 244
+ARDCL+PMGITSENVA+RFGV+RQ+QD A+ S ++AA+A + G F EI+PV T +
Sbjct: 171 NEKARDCLIPMGITSENVAERFGVSRQKQDAFALASQQKAASAQSRGCFHAEIVPVTTTV 230
Query: 245 VDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMK 304
++ K G +K +T+S D+G+RP+TT+ LAKLKPAFK G+TTAGN+SQVSDGA AVLL +
Sbjct: 231 LNDK-GDKKTITVSQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLAR 289
Query: 305 RSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFA 364
RS A + GLPILGV RS++ VGV P VMGIGPA AIPAA++ AGL ++DI++FEINEAFA
Sbjct: 290 RSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFA 349
Query: 365 SQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMC 424
SQ VYC++KLG+ EKVN GGA+ALGHPLG TGAR V TLL+E+KRRG+ +GV+SMC
Sbjct: 350 SQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMC 408
Query: 425 IGSGMGAAAVFE 436
IG+GMGAAAVFE
Sbjct: 409 IGTGMGAAAVFE 420
|
Mus musculus (taxid: 10090) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|P21775|THIKA_RAT 3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2 | Back alignment and function description |
|---|
Score = 469 bits (1207), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/432 (56%), Positives = 321/432 (74%), Gaps = 12/432 (2%)
Query: 5 LHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKA 64
+HR +++L HL + + S A+ A+ CSA A DVV+V RT I +A
Sbjct: 1 MHRLQVVLGHL---AGRPESSSALQAAPCSA------TFPQASASDVVVVHGRRTPIGRA 51
Query: 65 KRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF 124
RGGFKDT D+LL+ VL AV++ +L P +GDI VG VL PG+ M R+A F +G
Sbjct: 52 GRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLEPGAGAVM-ARIAQFLSGI 110
Query: 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEI 184
PETVPL VNRQCSSGLQAVA++A I+ G YDIG+A G+ESM++++ G ++ ++
Sbjct: 111 PETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSLSNRGNPGNISSRLLE 170
Query: 185 FTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKI 244
+ARDCL+PMGITSENVA+RFG++RQ+QD A+ S ++AA+A + G F+ EI+PV T +
Sbjct: 171 SDKARDCLIPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTTV 230
Query: 245 VDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMK 304
+D K G K +T+S D+G+RP+TT+ LAKLKPAFK G+TTAGN+SQVSDGA AVLL +
Sbjct: 231 LDDK-GDRKTITVSQDEGVRPSTTMEGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLAR 289
Query: 305 RSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFA 364
RS A + GLPILGV RS++ VGV P +MGIGPA AIPAA++ AGL ++DI++FEINEAFA
Sbjct: 290 RSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFA 349
Query: 365 SQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMC 424
SQ +YC++KLG+ EKVN GGA+ALGHPLG TGAR V TLL+E+KRRG+ +GV+SMC
Sbjct: 350 SQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMC 408
Query: 425 IGSGMGAAAVFE 436
IG+GMGAAAVFE
Sbjct: 409 IGTGMGAAAVFE 420
|
Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|P09110|THIK_HUMAN 3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/432 (55%), Positives = 316/432 (73%), Gaps = 12/432 (2%)
Query: 5 LHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKA 64
+ R +++L HL+ + + P + + A +A+ DVV+V RTAIC+A
Sbjct: 1 MQRLQVVLGHLR-GPADSGWMPQAAPCLSGAPQASAA--------DVVVVHGRRTAICRA 51
Query: 65 KRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF 124
RGGFKDT D+LL+ V+ AV++ L P ++GDI VG VL PG+ A+ R+A F +
Sbjct: 52 GRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAG-AIMARIAQFLSDI 110
Query: 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEI 184
PETVPL TVNRQCSSGLQAVA +A I+ G YDIG+A G+ESM++ G + ++
Sbjct: 111 PETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLME 170
Query: 185 FTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKI 244
+ARDCL+PMGITSENVA+RFG++R++QD A+ S ++AA A + G F+ EI+PV T +
Sbjct: 171 KEKARDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTV 230
Query: 245 VDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMK 304
D K G ++ +T++ D+GIRP+TT+ LAKLKPAFKKDG+TTAGN+SQVSDGA A+LL +
Sbjct: 231 HDDK-GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAAAILLAR 289
Query: 305 RSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFA 364
RS A + GLPILGV RS++ VGV P +MGIGPA AIP A++ AGL + D+++FEINEAFA
Sbjct: 290 RSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFA 349
Query: 365 SQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMC 424
SQ YC++KL L PEKVN GGAVALGHPLG TGAR V TLL+E+KRRGK +GV+SMC
Sbjct: 350 SQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRA-YGVVSMC 408
Query: 425 IGSGMGAAAVFE 436
IG+GMGAAAVFE
Sbjct: 409 IGTGMGAAAVFE 420
|
Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|Q05493|THIK_YARLI 3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=POT1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/390 (54%), Positives = 277/390 (71%), Gaps = 11/390 (2%)
Query: 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
DDVVI AAYRTA K +G FKDT + +LLA +L+ ++++++++P +GD+V G VLA G
Sbjct: 28 DDVVITAAYRTAHTKGGKGLFKDTSSSELLASLLEGLVKESKIDPKLIGDVVCGNVLAAG 87
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
+ A E R A AG PETVP +NRQCSSGL AV DVA I+AG DIGI G+ESM+
Sbjct: 88 AG-ATEHRAACLVAGIPETVPFVALNRQCSSGLMAVNDVANKIRAGQIDIGIGCGVESMS 146
Query: 169 V----NSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRA 224
NS++ K + +A+ CL+PMGITSENVA ++ V+R+ QD A +S+ +A
Sbjct: 147 NQYGPNSVTPFSN---KFQNNEEAKKCLIPMGITSENVAAKYNVSRKAQDAFAAKSYEKA 203
Query: 225 AAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT 284
AAA A+GKF EI+P+ T ++D EK VT++ DDGIRP T L KLKPAF +GT
Sbjct: 204 AAAQAAGKFDQEILPIKTTVLDDDDN-EKEVTVNKDDGIRPGVTAEKLGKLKPAFSAEGT 262
Query: 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAV 344
T AGNASQ+SDGAGAVLLM+RS+A + G PIL F VGV P +MGIGPA AIPA +
Sbjct: 263 THAGNASQISDGAGAVLLMRRSVAEKLGQPILAKFVHCKTVGVPPELMGIGPAYAIPAVL 322
Query: 345 KSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVAT 404
+ GL ++D+++FEINEAFASQ ++ I+ G+D KVN GGA+A+GHPLGATGAR AT
Sbjct: 323 EDLGLTVNDVDVFEINEAFASQALFSIQHCGIDESKVNPRGGAIAIGHPLGATGARQFAT 382
Query: 405 LLSEMKRRGKDCRFGVISMCIGSGMGAAAV 434
LLSE+K GK + GV SMCIG+GMGAA++
Sbjct: 383 LLSELKESGK--KVGVTSMCIGTGMGAASL 410
|
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|P33291|THIKB_CANTR 3-ketoacyl-CoA thiolase B, peroxisomal OS=Candida tropicalis PE=3 SV=1 | Back alignment and function description |
|---|
Score = 360 bits (925), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 196/393 (49%), Positives = 261/393 (66%), Gaps = 14/393 (3%)
Query: 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVL--A 106
DDVVIVAAYRTAI K +G F++ ++ +L LK I+KT ++PS + D+ +G VL A
Sbjct: 25 DDVVIVAAYRTAIGKGFKGSFRNVHSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQA 84
Query: 107 PGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLES 166
G+T E R A AG P T VNR CSSGL A++D+A IK G + G+A G ES
Sbjct: 85 AGAT---EHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAES 141
Query: 167 MTVN--SISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRA 224
M+ N V +++P + Q CL+PMGIT+ENVA +F ++R+ QD A +S+ +A
Sbjct: 142 MSTNYRDPRVAPRIDPHLADDAQMEKCLIPMGITNENVANQFNISRERQDEFAAKSYNKA 201
Query: 225 AAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT 284
A A ASG FK EI+P+ + I+ G EK + + D+G R T L KL+PAF DGT
Sbjct: 202 AKAVASGAFKSEILPIRS-IIRNSDGTEKEIIVDTDEGPREGVTAESLGKLRPAF--DGT 258
Query: 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAV 344
TTAGNASQVSDGA AVLLMKRSLA KG PI+G + S GV P +MG+GPA AIP +
Sbjct: 259 TTAGNASQVSDGAAAVLLMKRSLAEAKGYPIIGKYVLCSTAGVPPEIMGVGPAFAIPEVL 318
Query: 345 KSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVAT 404
K GL +DDI++FEINEAFA+Q +Y +++ + EK+N+NGGA+ALGHPLG TGAR AT
Sbjct: 319 KRTGLTVDDIDVFEINEAFAAQCLYSAEQVNVPEEKLNINGGAIALGHPLGETGARQYAT 378
Query: 405 LLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
++ + K + G+ SMCIGSGMG+A++ R
Sbjct: 379 IIPLL----KPGQIGLTSMCIGSGMGSASILVR 407
|
Candida tropicalis (taxid: 5482) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 461 | ||||||
| 442569925 | 464 | 3-ketoacyl-CoA thiolase 1 [Rehmannia glu | 1.0 | 0.993 | 0.803 | 0.0 | |
| 440808089 | 464 | 3-ketoacyl-CoA thiolase 2 [Rehmannia glu | 1.0 | 0.993 | 0.801 | 0.0 | |
| 257815407 | 462 | 3-ketoacyl CoA thiolase 1 [Petunia x hyb | 1.0 | 0.997 | 0.816 | 0.0 | |
| 225433424 | 461 | PREDICTED: 3-ketoacyl-CoA thiolase 2, pe | 1.0 | 1.0 | 0.806 | 0.0 | |
| 147866537 | 461 | hypothetical protein VITISV_023191 [Viti | 1.0 | 1.0 | 0.806 | 0.0 | |
| 449432452 | 462 | PREDICTED: 3-ketoacyl-CoA thiolase 2, pe | 1.0 | 0.997 | 0.792 | 0.0 | |
| 242039477 | 462 | hypothetical protein SORBIDRAFT_01g02015 | 0.997 | 0.995 | 0.809 | 0.0 | |
| 223950105 | 461 | unknown [Zea mays] gi|413934107|gb|AFW68 | 0.997 | 0.997 | 0.804 | 0.0 | |
| 7433647 | 461 | acetyl-CoA C-acyltransferase (EC 2.3.1.1 | 1.0 | 1.0 | 0.793 | 0.0 | |
| 224064818 | 457 | predicted protein [Populus trichocarpa] | 0.991 | 1.0 | 0.809 | 0.0 |
| >gi|442569925|gb|AGC59769.1| 3-ketoacyl-CoA thiolase 1 [Rehmannia glutinosa] | Back alignment and taxonomy information |
|---|
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/464 (80%), Positives = 415/464 (89%), Gaps = 3/464 (0%)
Query: 1 MEKALHRQRILLQHLQPS--SSQTSD-SPAISASICSAGEAAGYHRKPAFDDDVVIVAAY 57
MEKA RQR+LLQHL+PS SS D ++SASICSAG++A YHR F DDVVIVAAY
Sbjct: 1 MEKATERQRVLLQHLRPSFTSSSLEDIESSVSASICSAGDSAAYHRSSVFGDDVVIVAAY 60
Query: 58 RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRM 117
RTA+CK+KRGGFKDT DDLLAPVL+AV+EKT +NP+EVGDIVVGTVLAPGS RA ECRM
Sbjct: 61 RTALCKSKRGGFKDTYPDDLLAPVLRAVVEKTNVNPNEVGDIVVGTVLAPGSQRASECRM 120
Query: 118 AAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ 177
AAFYAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMTVN ++ G
Sbjct: 121 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS 180
Query: 178 VNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEI 237
VNP+V+ QA+DCLLPMGITSENVA RFGVTRQEQD AAV+SHR+AAAATASGKFKDEI
Sbjct: 181 VNPRVKSMAQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVDSHRKAAAATASGKFKDEI 240
Query: 238 IPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGA 297
IPV TKIVDPK+G EK VTISVDDGIRPNT++ADL KLKP FKKDG+TTAGN+SQVSDGA
Sbjct: 241 IPVKTKIVDPKSGDEKPVTISVDDGIRPNTSVADLGKLKPVFKKDGSTTAGNSSQVSDGA 300
Query: 298 GAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357
GAVLLMKRS+A+QKGLPILGVFRSF+AVGVDP++MG+GPAVAIPAAVKSAGL++ DI+LF
Sbjct: 301 GAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAIMGVGPAVAIPAAVKSAGLELGDIDLF 360
Query: 358 EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCR 417
E+NEAFASQ+VYC KKL LDPEK+NVNGGA+A+GHPLG TGARCVATLL EMKRRGKDCR
Sbjct: 361 EVNEAFASQFVYCRKKLELDPEKINVNGGAMAIGHPLGVTGARCVATLLHEMKRRGKDCR 420
Query: 418 FGVISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTHLSKDAK 461
FGV+SMCIG+GMGAAAVFERGD DEL NAR V TH LSKDA+
Sbjct: 421 FGVVSMCIGTGMGAAAVFERGDSCDELSNARTVGTHNFLSKDAR 464
|
Source: Rehmannia glutinosa Species: Rehmannia glutinosa Genus: Rehmannia Family: Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|440808089|gb|AGC24176.1| 3-ketoacyl-CoA thiolase 2 [Rehmannia glutinosa] | Back alignment and taxonomy information |
|---|
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/464 (80%), Positives = 413/464 (89%), Gaps = 3/464 (0%)
Query: 1 MEKALHRQRILLQHLQPS--SSQTSD-SPAISASICSAGEAAGYHRKPAFDDDVVIVAAY 57
MEKA RQR+LLQHL+PS SS D ++SASICSAG++A YHR F DDVVIVAAY
Sbjct: 1 MEKATERQRVLLQHLRPSFTSSSLEDIESSVSASICSAGDSAAYHRSSVFGDDVVIVAAY 60
Query: 58 RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRM 117
RTA+CK+KRGGFKDT DDLLAPVL+AV+EKT +NP+EVGDIVVGTVLAPGS RA ECRM
Sbjct: 61 RTALCKSKRGGFKDTYPDDLLAPVLRAVVEKTNVNPNEVGDIVVGTVLAPGSQRASECRM 120
Query: 118 AAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ 177
AAFYAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMTVN ++ G
Sbjct: 121 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS 180
Query: 178 VNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEI 237
VNP+V+ QA+DCLLPMGITSENVA RFGVTRQEQD AAV+SHR+AAAATASGKFKDEI
Sbjct: 181 VNPRVKSMAQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVDSHRKAAAATASGKFKDEI 240
Query: 238 IPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGA 297
IPV TKIVDPK+G EK VTISVDDGIRPNT++ADL KLKP FKKDG+TTAGN+SQVSDGA
Sbjct: 241 IPVKTKIVDPKSGDEKPVTISVDDGIRPNTSVADLGKLKPVFKKDGSTTAGNSSQVSDGA 300
Query: 298 GAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357
GAVLLMKRS+A+QKGLPILGVFRSF+AVGVDP++MG+GPAVAIPAAVKSAGL++ DI+LF
Sbjct: 301 GAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAIMGVGPAVAIPAAVKSAGLELGDIDLF 360
Query: 358 EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCR 417
EINEAFASQ+VYC KKL LDPEK+NVNGGA+A+GHPLG TGARCV TLL EMKRRGKDCR
Sbjct: 361 EINEAFASQFVYCRKKLELDPEKINVNGGAMAIGHPLGVTGARCVVTLLHEMKRRGKDCR 420
Query: 418 FGVISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTHLSKDAK 461
FGV+SMCIG+GMGAAAVFERGD DEL N R V TH LSKDA+
Sbjct: 421 FGVVSMCIGTGMGAAAVFERGDSCDELSNTRTVGTHNFLSKDAR 464
|
Source: Rehmannia glutinosa Species: Rehmannia glutinosa Genus: Rehmannia Family: Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|257815407|gb|ACV70032.1| 3-ketoacyl CoA thiolase 1 [Petunia x hybrida] | Back alignment and taxonomy information |
|---|
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/462 (81%), Positives = 411/462 (88%), Gaps = 1/462 (0%)
Query: 1 MEKALHRQRILLQHLQPSSSQTSD-SPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRT 59
MEKA+ RQR+LL+HLQP T D S +++ SIC+AG++A Y R AF DDVVIVAAYRT
Sbjct: 1 MEKAIQRQRVLLEHLQPIRHHTHDHSSSLTTSICAAGDSAAYQRTAAFGDDVVIVAAYRT 60
Query: 60 AICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAA 119
AICK+KRGGFKDTL+DDLLAPVLKAVIEKT L+P EVGDIVVGTVLAPGS RAMECRMAA
Sbjct: 61 AICKSKRGGFKDTLSDDLLAPVLKAVIEKTNLDPKEVGDIVVGTVLAPGSIRAMECRMAA 120
Query: 120 FYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVN 179
FYAGFPETVP+RTVNRQCSSGLQAVADVA +IKAG YDIGI AGLE MTV++I V Q N
Sbjct: 121 FYAGFPETVPIRTVNRQCSSGLQAVADVAASIKAGFYDIGIGAGLELMTVDNIGRVQQRN 180
Query: 180 PKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIP 239
KV+ F QARDCLLPMGITSENVAQRFGVTR EQD AAV SH+RAAAATASGKFKDEIIP
Sbjct: 181 TKVDTFAQARDCLLPMGITSENVAQRFGVTRLEQDQAAVNSHQRAAAATASGKFKDEIIP 240
Query: 240 VNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGA 299
V TKIVDP+TG EK V ISVDDGIRPNT + L KLKPAFK DGTTTAGNASQVSDGA A
Sbjct: 241 VLTKIVDPQTGKEKPVVISVDDGIRPNTNLTSLGKLKPAFKNDGTTTAGNASQVSDGAAA 300
Query: 300 VLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI 359
VLLMKRS+A++KGLPILGVFRSF+AVGVDP+VMGIGPAVAIP AVKSAGL +DDI+L+EI
Sbjct: 301 VLLMKRSVAMKKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPPAVKSAGLDLDDIDLYEI 360
Query: 360 NEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFG 419
NEAFASQ+VYC KKL LDPEKVNVNGGA+ALGHPLGATGARCVATLL EMKRRGKDCRFG
Sbjct: 361 NEAFASQFVYCQKKLNLDPEKVNVNGGAMALGHPLGATGARCVATLLHEMKRRGKDCRFG 420
Query: 420 VISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTHLSKDAK 461
VISMCIGSGMGAAAVFERGD VD+LCNAR+ ++ LSKDAK
Sbjct: 421 VISMCIGSGMGAAAVFERGDAVDDLCNARVSNNNSFLSKDAK 462
|
Source: Petunia x hybrida Species: Petunia x hybrida Genus: Petunia Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225433424|ref|XP_002285653.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal isoform 1 [Vitis vinifera] gi|297741919|emb|CBI33354.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/461 (80%), Positives = 416/461 (90%)
Query: 1 MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
MEKA++RQR+LLQHL PSSS D ++SAS+C AG++A Y R F DDVVIVAAYRTA
Sbjct: 1 MEKAINRQRVLLQHLSPSSSAAEDESSLSASVCVAGDSAAYQRTSVFGDDVVIVAAYRTA 60
Query: 61 ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
+CK+KRGGFKDT DDLLAPVL+A++EKT LNP+EVGDIVVGTVLAPGS RA ECRMAAF
Sbjct: 61 LCKSKRGGFKDTYPDDLLAPVLRALLEKTNLNPNEVGDIVVGTVLAPGSQRASECRMAAF 120
Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
YAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N ++ G +NP
Sbjct: 121 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTANPMAWEGSINP 180
Query: 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240
KV+ F QA+DCLLPMGITSENVA RFGVTRQEQD AAVESH+RAAAATA+GKFKDEIIPV
Sbjct: 181 KVKEFVQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVESHKRAAAATATGKFKDEIIPV 240
Query: 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
+TKIVDPKTG EK VTISVDDGIRPN T++DLAKLKP FKK+GTTTAGN+SQVSDGAGAV
Sbjct: 241 STKIVDPKTGDEKLVTISVDDGIRPNATMSDLAKLKPVFKKNGTTTAGNSSQVSDGAGAV 300
Query: 301 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360
LLMKRS+A++KGLPILGVFR+F+AVGVDP+VMGIGPAVAIPAAVKSAGL++DDI+LFEIN
Sbjct: 301 LLMKRSVAMRKGLPILGVFRTFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEIN 360
Query: 361 EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGV 420
EAFASQ+VYC KKL LDPEK+NVNGGA+A+GHPLGATGARCV TLL EMKRRGKDCRFGV
Sbjct: 361 EAFASQFVYCRKKLDLDPEKINVNGGAMAIGHPLGATGARCVGTLLHEMKRRGKDCRFGV 420
Query: 421 ISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTHLSKDAK 461
+SMCIG+GMGAAAVFERGDCVDEL NAR + LSKDA+
Sbjct: 421 VSMCIGTGMGAAAVFERGDCVDELRNARTAENNNLLSKDAQ 461
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147866537|emb|CAN81585.1| hypothetical protein VITISV_023191 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/461 (80%), Positives = 415/461 (90%)
Query: 1 MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
MEKA++RQR+LLQHL PSSS D ++SAS+C AG++A Y R F DDVVIVAAYRTA
Sbjct: 1 MEKAINRQRVLLQHLSPSSSAAEDESSLSASVCVAGDSAAYQRTSVFGDDVVIVAAYRTA 60
Query: 61 ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
+CK+KRGGFKDT DDLLAPVL+A+IEKT LNP+EVGDIVVGTVLAPGS RA ECRMAAF
Sbjct: 61 LCKSKRGGFKDTYPDDLLAPVLRALIEKTNLNPNEVGDIVVGTVLAPGSQRASECRMAAF 120
Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
YAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N ++ G +NP
Sbjct: 121 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTANPMAWEGSINP 180
Query: 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240
KV+ F QA+DCLLPMGITSENVA RFGVTRQEQD AAVESH+RAAAATA+GKFKDEIIPV
Sbjct: 181 KVKEFVQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVESHKRAAAATATGKFKDEIIPV 240
Query: 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
+TKIVDPKTG EK VTISVDDGIRPN ++DLAKLKP FKK+GTTTAGN+SQVSDGAGAV
Sbjct: 241 STKIVDPKTGDEKPVTISVDDGIRPNAIMSDLAKLKPVFKKNGTTTAGNSSQVSDGAGAV 300
Query: 301 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360
LLMKRS+A++KGLPILGVFR+F+AVGVDP+VMGIGPAVAIPAAVKSAGL++DDI+LFEIN
Sbjct: 301 LLMKRSVAMRKGLPILGVFRTFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEIN 360
Query: 361 EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGV 420
EAFASQ+VYC KKL LDPEK+NVNGGA+A+GHPLGATGARCV TLL EMKRRGKDCRFGV
Sbjct: 361 EAFASQFVYCRKKLDLDPEKINVNGGAMAIGHPLGATGARCVGTLLHEMKRRGKDCRFGV 420
Query: 421 ISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTHLSKDAK 461
+SMCIG+GMGAAAVFERGDCVDEL NAR + LSKDA+
Sbjct: 421 VSMCIGTGMGAAAVFERGDCVDELRNARTAENNNLLSKDAQ 461
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449432452|ref|XP_004134013.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Cucumis sativus] gi|449487514|ref|XP_004157664.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Cucumis sativus] gi|393707|emb|CAA47926.1| 3-ketoacyl-CoA thiolase [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/462 (79%), Positives = 417/462 (90%), Gaps = 1/462 (0%)
Query: 1 MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
MEKA++RQ ILL HL+PSSS ++ ++SAS+C+AG++A Y R F DDVVIVAAYRTA
Sbjct: 1 MEKAINRQSILLHHLRPSSSAYTNESSLSASVCAAGDSASYQRTSVFGDDVVIVAAYRTA 60
Query: 61 ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
ICK+KRGGFKDT DDLLAPVLKA+IEKT LNPSEVGDIVVG+VLAPGS RA ECRMAAF
Sbjct: 61 ICKSKRGGFKDTYPDDLLAPVLKALIEKTNLNPSEVGDIVVGSVLAPGSQRASECRMAAF 120
Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
YAGFPETVP+RTVNRQCSSGLQAVADVA AI+AG YDIGI AGLESMT N ++ G VNP
Sbjct: 121 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIRAGFYDIGIGAGLESMTTNPMAWEGSVNP 180
Query: 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240
+V+ A++CLLPMG+TSENVAQRFGV+R++QD AA+ESHR+AAAATASGKFKDEIIPV
Sbjct: 181 RVKSIENAQNCLLPMGVTSENVAQRFGVSREKQDQAAIESHRKAAAATASGKFKDEIIPV 240
Query: 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
+TKI+DPKTG EK VTISVDDGIRPNTT ADL KLK FKKDGTTTAGN+SQVSDGAGAV
Sbjct: 241 STKIIDPKTGQEKPVTISVDDGIRPNTTQADLGKLKAVFKKDGTTTAGNSSQVSDGAGAV 300
Query: 301 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360
LLMKRS+A++KGLPILGVFR+FSAVGVDP++MG+GPAVAIPAAVK+AGL+++DI+LFEIN
Sbjct: 301 LLMKRSVAMRKGLPILGVFRTFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDIDLFEIN 360
Query: 361 EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGV 420
EAFASQ+VYC KLGLDPEK+NVNGGA+A+GHPLGATGARCVATLL EMKRRGKDCRFGV
Sbjct: 361 EAFASQFVYCRNKLGLDPEKINVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRFGV 420
Query: 421 ISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTH-LSKDAK 461
ISMCIG+GMGAAAVFERGDCVDELCNA+ V + LSKDA+
Sbjct: 421 ISMCIGTGMGAAAVFERGDCVDELCNAKKVEGGVNLLSKDAR 462
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|242039477|ref|XP_002467133.1| hypothetical protein SORBIDRAFT_01g020150 [Sorghum bicolor] gi|241920987|gb|EER94131.1| hypothetical protein SORBIDRAFT_01g020150 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/461 (80%), Positives = 425/461 (92%), Gaps = 1/461 (0%)
Query: 1 MEKALHRQRILLQHLQPSSSQTSDSPA-ISASICSAGEAAGYHRKPAFDDDVVIVAAYRT 59
MEKA+ RQR+LL+HL P+++ S +P ISAS C+AG++A YHR PAF DDVVIVAAYRT
Sbjct: 1 MEKAIDRQRVLLRHLSPAAAAESPAPPAISASACAAGDSAAYHRTPAFADDVVIVAAYRT 60
Query: 60 AICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAA 119
AICKAKRGGFKDT A+DLL PV KA+++KT+L+PSEVGDIVVGTVLAPGS RA+ECRMAA
Sbjct: 61 AICKAKRGGFKDTFAEDLLVPVFKALVDKTKLDPSEVGDIVVGTVLAPGSQRAIECRMAA 120
Query: 120 FYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVN 179
YAGFP+TVPL+TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN +S+ GQVN
Sbjct: 121 LYAGFPDTVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNKVSLDGQVN 180
Query: 180 PKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIP 239
PKVE+F+QARDCLLPMG+TSENVA RFG+TR EQD AAVESHR+AAAA A+GKFK+EI+P
Sbjct: 181 PKVELFSQARDCLLPMGLTSENVAHRFGITRLEQDQAAVESHRKAAAAAAAGKFKEEIVP 240
Query: 240 VNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGA 299
V+TKIVDPKTG EK++ +S DDGIRP+T++A L+KLKPAF KDGTTTAGNASQVSDGAGA
Sbjct: 241 VHTKIVDPKTGEEKKIVVSADDGIRPDTSLAVLSKLKPAFSKDGTTTAGNASQVSDGAGA 300
Query: 300 VLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI 359
VLLM+R +A++KGLPILGVFR+F+AVGVDP+VMGIGPAVAIPAAVK+AGLQ+DDI+LFEI
Sbjct: 301 VLLMRRDVAMKKGLPILGVFRTFAAVGVDPAVMGIGPAVAIPAAVKAAGLQMDDIDLFEI 360
Query: 360 NEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFG 419
NEAFASQYVYC KKL LDP KVNVNGGA+ALGHPLG TGARCV+TLL+EMKRRGKDCRFG
Sbjct: 361 NEAFASQYVYCCKKLELDPAKVNVNGGAMALGHPLGCTGARCVSTLLNEMKRRGKDCRFG 420
Query: 420 VISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTHLSKDA 460
VISMCIGSGMGAAAVFERGDCVDEL N+R +PTH LSKDA
Sbjct: 421 VISMCIGSGMGAAAVFERGDCVDELTNSRGIPTHNWLSKDA 461
|
Source: Sorghum bicolor Species: Sorghum bicolor Genus: Sorghum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|223950105|gb|ACN29136.1| unknown [Zea mays] gi|413934107|gb|AFW68658.1| hypothetical protein ZEAMMB73_512974 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/460 (80%), Positives = 423/460 (91%)
Query: 1 MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
MEKA+ RQR+LL+HL P+++ + PAISAS C+AG++A YHR+PAF DDVVIVAAYRTA
Sbjct: 1 MEKAVDRQRVLLRHLNPAAAGSPAPPAISASACAAGDSAAYHRRPAFADDVVIVAAYRTA 60
Query: 61 ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
ICKAKRGGFKDT A+DLL PV KA+++KT+L+PSEVGDIVVGTVLAPGS RA+ECRMAA
Sbjct: 61 ICKAKRGGFKDTFAEDLLVPVFKALVDKTKLDPSEVGDIVVGTVLAPGSQRAIECRMAAL 120
Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
YAGFP+TVPL+TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN +S+ GQ NP
Sbjct: 121 YAGFPDTVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNKVSLDGQANP 180
Query: 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240
KVE+F+QARDCLLPMG+TSENVA RFG+TR EQD AAVESHR+AAAA A+GKFK+EI+PV
Sbjct: 181 KVELFSQARDCLLPMGLTSENVAHRFGITRLEQDQAAVESHRKAAAAAAAGKFKEEIVPV 240
Query: 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
+TKIVDPKTG EK++ IS DDGIR +T++A L+KLKPAF KDG+TTAGNASQVSDGAGAV
Sbjct: 241 HTKIVDPKTGEEKKIVISADDGIRVDTSLAVLSKLKPAFSKDGSTTAGNASQVSDGAGAV 300
Query: 301 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360
LLM+R +A++KGLP+LGVFR+F+AVGVDP+VMGIGPAVAIPAAVK+AGLQ+DDI+LFEIN
Sbjct: 301 LLMRRDVAMKKGLPVLGVFRTFAAVGVDPAVMGIGPAVAIPAAVKAAGLQMDDIDLFEIN 360
Query: 361 EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGV 420
EAFASQYVYC KKL LDP KVNVNGGA+ALGHPLGATGARCV+TLL+EMKRRGKDCRFGV
Sbjct: 361 EAFASQYVYCCKKLKLDPAKVNVNGGAMALGHPLGATGARCVSTLLNEMKRRGKDCRFGV 420
Query: 421 ISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTHLSKDA 460
ISMCIGSGMGAAAVFERGD VDEL NAR + TH LSKDA
Sbjct: 421 ISMCIGSGMGAAAVFERGDGVDELTNARGISTHNWLSKDA 460
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|7433647|pir||S72532 acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor - cucurbit gi|1694621|dbj|BAA11117.1| 3-ketoacyl-CoA thiolase [Cucurbita cv. Kurokawa Amakuri] | Back alignment and taxonomy information |
|---|
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/461 (79%), Positives = 414/461 (89%)
Query: 1 MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
MEKA++RQ ILL HL+PSSS S ++SAS+C+AG++A Y R F DDVVIVAAYRTA
Sbjct: 1 MEKAINRQSILLHHLRPSSSAYSHESSLSASVCAAGDSASYQRTSVFGDDVVIVAAYRTA 60
Query: 61 ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
+CK+KRGGFKDT DDLLAPVLKA+IEKT LNPSEVGDIVVG+VLAPGS RA ECRMA F
Sbjct: 61 LCKSKRGGFKDTYPDDLLAPVLKALIEKTNLNPSEVGDIVVGSVLAPGSQRASECRMATF 120
Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
Y GFPETVP+RTVNRQCSSGLQAVADVA AI+AG YDIGI AGLESMTVN ++ G VNP
Sbjct: 121 YPGFPETVPVRTVNRQCSSGLQAVADVAAAIRAGFYDIGIGAGLESMTVNPMAWDGSVNP 180
Query: 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240
+V+ A++CLLPMG+TSENVAQRFGV+R+EQD AAVESHR+AAAATASGKFKDEIIPV
Sbjct: 181 RVKSMENAQNCLLPMGVTSENVAQRFGVSREEQDKAAVESHRKAAAATASGKFKDEIIPV 240
Query: 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
+TKI+DPKTG E+ VTISVDDGIRPNTT ADL KLKP FKKDGTTTAGN+SQVSDGAGAV
Sbjct: 241 STKIIDPKTGEERPVTISVDDGIRPNTTQADLGKLKPVFKKDGTTTAGNSSQVSDGAGAV 300
Query: 301 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360
LLMKRS+A+QKGLPILGVFR+F+AVGVDP++MG+GPAVAIPAAVK+AGL+++DI+LFEIN
Sbjct: 301 LLMKRSVAMQKGLPILGVFRTFTAVGVDPAIMGVGPAVAIPAAVKAAGLELNDIDLFEIN 360
Query: 361 EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGV 420
EAFASQ+VYC KLGLDPEK+NVNGGA+A+GHPLG TGARCVATLL EMKRRGKDCRFGV
Sbjct: 361 EAFASQFVYCRNKLGLDPEKINVNGGAIAIGHPLGTTGARCVATLLHEMKRRGKDCRFGV 420
Query: 421 ISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTHLSKDAK 461
ISMCIG+GMGAAAVFERGDCVDELCNA+ V LSKDA+
Sbjct: 421 ISMCIGTGMGAAAVFERGDCVDELCNAKKVEGINLLSKDAR 461
|
Source: Cucurbita cv. Kurokawa Amakuri Species: Cucurbita hybrid cultivar Genus: Cucurbita Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224064818|ref|XP_002301570.1| predicted protein [Populus trichocarpa] gi|222843296|gb|EEE80843.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/461 (80%), Positives = 417/461 (90%), Gaps = 4/461 (0%)
Query: 1 MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
MEKA +RQ++LL HLQP TS SP +SASIC+AG++A YHR AF DD+VIVAAYRTA
Sbjct: 1 MEKAFNRQKVLLAHLQP----TSPSPLLSASICAAGDSAAYHRTAAFGDDIVIVAAYRTA 56
Query: 61 ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
ICKA+RGGFKDT DDLL VLKAV+EKT +NPSEVGDIVVGTVLAPGS RA+ECRMAAF
Sbjct: 57 ICKARRGGFKDTFPDDLLGFVLKAVVEKTNVNPSEVGDIVVGTVLAPGSERAIECRMAAF 116
Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
YAGFP+TVPLRTVNRQCSSGLQAVADVA +IKAG YDIGIAAGLE MTVN I V QVNP
Sbjct: 117 YAGFPDTVPLRTVNRQCSSGLQAVADVAASIKAGYYDIGIAAGLECMTVNGIRSVPQVNP 176
Query: 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240
+VE F QARDCLLPMG+TSENVAQR+GVTRQ+QD AAV+SHR+AAAA ASGKFKDEIIPV
Sbjct: 177 RVEAFQQARDCLLPMGLTSENVAQRYGVTRQDQDQAAVDSHRKAAAARASGKFKDEIIPV 236
Query: 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
TKIVDP+TG++K +TIS DDGIRPN+ +A+L++LKPAFKKDG+TTAGNASQVSDGAGAV
Sbjct: 237 TTKIVDPETGIQKVITISEDDGIRPNSNLAELSRLKPAFKKDGSTTAGNASQVSDGAGAV 296
Query: 301 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360
LLMKRSLA QKGLPILGVFRSF+AVGVDP+VMG+GPA AIPAAV++AGL+++DI+LFEIN
Sbjct: 297 LLMKRSLAAQKGLPILGVFRSFAAVGVDPAVMGVGPAAAIPAAVQAAGLELNDIDLFEIN 356
Query: 361 EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGV 420
EAFASQYVYCIKKL LDPEKVNVNGGA+ALGHPLGATGARCV TLL+EMKRRGKD RFGV
Sbjct: 357 EAFASQYVYCIKKLELDPEKVNVNGGAIALGHPLGATGARCVGTLLNEMKRRGKDSRFGV 416
Query: 421 ISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTHLSKDAK 461
ISMCIGSGMGAAAVFERGDCVD LCN R V ++ LSKDA+
Sbjct: 417 ISMCIGSGMGAAAVFERGDCVDALCNVRKVGSNDLLSKDAR 457
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 461 | ||||||
| TAIR|locus:2046565 | 462 | PKT3 "peroxisomal 3-ketoacyl-C | 1.0 | 0.997 | 0.740 | 1e-178 | |
| TAIR|locus:2197778 | 443 | PKT4 "peroxisomal 3-ketoacyl-C | 0.960 | 1.0 | 0.724 | 3.6e-169 | |
| TAIR|locus:2156514 | 457 | KAT5 "3-KETO-ACYL-COENZYME A T | 0.980 | 0.989 | 0.684 | 2.5e-161 | |
| UNIPROTKB|F1RRB7 | 426 | ACAA1 "Uncharacterized protein | 0.880 | 0.953 | 0.569 | 8.8e-118 | |
| RGD|1562373 | 424 | Acaa1b "acetyl-Coenzyme A acyl | 0.887 | 0.964 | 0.566 | 1.4e-117 | |
| UNIPROTKB|E2REH5 | 426 | ACAA1 "Uncharacterized protein | 0.889 | 0.962 | 0.569 | 1.8e-117 | |
| MGI|MGI:2148491 | 424 | Acaa1a "acetyl-Coenzyme A acyl | 0.885 | 0.962 | 0.568 | 3e-117 | |
| UNIPROTKB|F1NB64 | 425 | ACAA1 "Uncharacterized protein | 0.835 | 0.905 | 0.590 | 7.9e-117 | |
| MGI|MGI:3605455 | 424 | Acaa1b "acetyl-Coenzyme A acyl | 0.887 | 0.964 | 0.569 | 7.9e-117 | |
| UNIPROTKB|P09110 | 424 | ACAA1 "3-ketoacyl-CoA thiolase | 0.832 | 0.905 | 0.589 | 2.1e-116 |
| TAIR|locus:2046565 PKT3 "peroxisomal 3-ketoacyl-CoA thiolase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1735 (615.8 bits), Expect = 1.0e-178, P = 1.0e-178
Identities = 342/462 (74%), Positives = 384/462 (83%)
Query: 1 MEKAXXXXXXXXXXXXPSSSQTSDSPA-ISASICSAGEAAGYHRKPAFDDDVVIVAAYRT 59
MEKA PSSS + + A +SAS C AG++A Y R + DDVVIVAA+RT
Sbjct: 1 MEKAIERQRVLLEHLRPSSSSSHNYEASLSASACLAGDSAAYQRTSLYGDDVVIVAAHRT 60
Query: 60 AICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAA 119
+CK+KRG FKDT DDLLAPVL+A+IEKT LNPSEVGDIVVGTVLAPGS RA ECRMAA
Sbjct: 61 PLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAA 120
Query: 120 FYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVN 179
FYAGFPETV +RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N ++ G VN
Sbjct: 121 FYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVN 180
Query: 180 PKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIP 239
P V+ F QA++CLLPMG+TSENVAQRFGV+RQEQD GKFKDEIIP
Sbjct: 181 PAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
Query: 240 VNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGA 299
V TK+VDPKTG EK +T+SVDDGIRP TT+A L KLKP FKKDGTTTAGN+SQVSDGAGA
Sbjct: 241 VKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGA 300
Query: 300 VLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI 359
VLLMKRS+A+QKGLP+LGVFR+F+AVGVDP++MGIGPAVAIPAAVK+AGL++DDI+LFEI
Sbjct: 301 VLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEI 360
Query: 360 NEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFG 419
NEAFASQ+VYC KLGLDPEK+NVNGGA+A+GHPLGATGARCVATLL EMKRRGKDCRFG
Sbjct: 361 NEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFG 420
Query: 420 VISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTHLSKDAK 461
V+SMCIG+GMGAAAVFERGD VDEL NAR V LSKDA+
Sbjct: 421 VVSMCIGTGMGAAAVFERGDGVDELRNARKVEAQGLLSKDAR 462
|
|
| TAIR|locus:2197778 PKT4 "peroxisomal 3-ketoacyl-CoA thiolase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1645 (584.1 bits), Expect = 3.6e-169, P = 3.6e-169
Identities = 326/450 (72%), Positives = 370/450 (82%)
Query: 1 MEKAXXXXXXXXXXXXPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
MEKA PSSS SD+ ++SAS C + ++A Y + DDVVIVAA RTA
Sbjct: 1 MEKATERQRILLRHLQPSSS--SDA-SLSASACLSKDSAAYQ----YGDDVVIVAAQRTA 53
Query: 61 ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
+CKAKRG FKDT D+LLA VL+A+IEKT +NPSEVGDIVVGTVL PGS RA ECRMAAF
Sbjct: 54 LCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVGTVLGPGSQRASECRMAAF 113
Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
YAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N G VNP
Sbjct: 114 YAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPRGWKGSVNP 173
Query: 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 240
V+ F QA +CLLPMGITSENVA RF V+R+EQD GKFKDEI PV
Sbjct: 174 NVKKFEQAHNCLLPMGITSENVAHRFNVSREEQDQAAVDSHRKAASATASGKFKDEITPV 233
Query: 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
TKIVDPKTG EK +T+SVDDGIRPNTT++ LAKLKP FK+DGTTTAGN+SQ+SDGAGAV
Sbjct: 234 KTKIVDPKTGDEKPITVSVDDGIRPNTTLSGLAKLKPVFKEDGTTTAGNSSQLSDGAGAV 293
Query: 301 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360
LLM+R++A+QKGLPILGVFR+FSAVGVDP++MG+GPAVAIPAAVK+AGL+++D++LFEIN
Sbjct: 294 LLMRRNVAMQKGLPILGVFRTFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDVDLFEIN 353
Query: 361 EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGV 420
EAFASQ+VYC KLGLD EK+NVNGGA+A+GHPLGATGARCVATLL EMKRRGKDCRFGV
Sbjct: 354 EAFASQFVYCRNKLGLDAEKINVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRFGV 413
Query: 421 ISMCIGSGMGAAAVFERGDCVDELCNARMV 450
+SMCIGSGMGAAAVFERG VDELC+ R V
Sbjct: 414 VSMCIGSGMGAAAVFERGGGVDELCDVRKV 443
|
|
| TAIR|locus:2156514 KAT5 "3-KETO-ACYL-COENZYME A THIOLASE 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1571 (558.1 bits), Expect = 2.5e-161, P = 2.5e-161
Identities = 315/460 (68%), Positives = 365/460 (79%)
Query: 1 MEKAXXXXXXXXXXXXPSSSQTSD---SPAISASICSAGEAAGYHRKPAFDDDVVIVAAY 57
ME+A P SS S P++ + + E + AF DD+VIVAAY
Sbjct: 1 MERAMERQKILLRHLNPVSSSNSSLKHEPSLLSPVNCVSEVSPM---AAFGDDIVIVAAY 57
Query: 58 RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRM 117
RTAICKA+RGGFKDTL DDLLA VLKAV+E+T L+PSEVGDIVVGTV+APGS RAMECR+
Sbjct: 58 RTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPGSQRAMECRV 117
Query: 118 AAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG- 176
AA++AGFP++VP+RTVNRQCSSGLQAVADVA +I+AG YDIGI AG+ESM+ + I G
Sbjct: 118 AAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMSTDHIPGGGF 177
Query: 177 -QVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKD 235
NP+ + F +ARDCLLPMGITSENVA+RFGVTR+EQD+ GK KD
Sbjct: 178 HGSNPRAQDFPKARDCLLPMGITSENVAERFGVTREEQDMAAVESHKRAAAAIASGKLKD 237
Query: 236 EIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSD 295
EIIPV TKIVDP+T EK + +SVDDG+RPN+ +ADLAKLK FK++G+TTAGNASQ+SD
Sbjct: 238 EIIPVATKIVDPETKAEKAIVVSVDDGVRPNSNMADLAKLKTVFKQNGSTTAGNASQISD 297
Query: 296 GAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIN 355
GAGAVLLMKRSLA++KGLPILGVFRSF+ GV+PSVMGIGPAVAIPAA K AGL + DI+
Sbjct: 298 GAGAVLLMKRSLAMKKGLPILGVFRSFAVTGVEPSVMGIGPAVAIPAATKLAGLNVSDID 357
Query: 356 LFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKD 415
LFEINEAFASQYVY KKL LD EKVNVNGGA+A+GHPLGATGARCVATLL EMKRRGKD
Sbjct: 358 LFEINEAFASQYVYSCKKLELDMEKVNVNGGAIAIGHPLGATGARCVATLLHEMKRRGKD 417
Query: 416 CRFGVISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTH 455
CRFGVISMCIG+GMGAAAVFERGD VD L NAR+ +H
Sbjct: 418 CRFGVISMCIGTGMGAAAVFERGDSVDNLSNARVANGDSH 457
|
|
| UNIPROTKB|F1RRB7 ACAA1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
Identities = 237/416 (56%), Positives = 305/416 (73%)
Query: 22 TSD-SPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAP 80
TSD +PA A CS+ A +D+V+V RTAI ++ RGGFKDT D+LL+
Sbjct: 16 TSDLAPAPQAEPCSSSHPL------ASAEDIVVVHGRRTAIGRSGRGGFKDTTPDELLSA 69
Query: 81 VLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSG 140
V+ AV++ +L+P+++GDI VG VL PG+ M R+A F + PETVPL TVNRQCSSG
Sbjct: 70 VMTAVLQDVKLSPAQLGDICVGNVLQPGAGAVM-ARIAQFLSDIPETVPLSTVNRQCSSG 128
Query: 141 LQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSE 200
LQAVA++A I+ G YDIG+A G+ESMT+ G ++ ++ +ARDCL+PMGITSE
Sbjct: 129 LQAVANIAGGIRNGSYDIGMACGVESMTLGDRGNPGNISSRLVEKEKARDCLIPMGITSE 188
Query: 201 NVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVD 260
NVA+RFG++R++QD G F+ EI+PV T + D K G EK +T++ D
Sbjct: 189 NVAKRFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVYDDK-GNEKSITVAQD 247
Query: 261 DGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320
+GIRPNTT+ LAKLKPAFK+ G+TTAGN+SQVSDGA A+LL +RS A + GLPILG+ R
Sbjct: 248 EGIRPNTTMEGLAKLKPAFKQGGSTTAGNSSQVSDGAAALLLARRSKAKELGLPILGILR 307
Query: 321 SFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEK 380
S++ VGV P +MGIGPA AIP A++ AGL +DDI++FEINEAFASQ +YC++KL L PEK
Sbjct: 308 SYAVVGVPPDIMGIGPAYAIPVALEKAGLTVDDIDIFEINEAFASQALYCVEKLKLPPEK 367
Query: 381 VNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436
VN GGAVALGHPLG TGAR V TLL+E+KRRGK +GV+SMCIG+GMGAAAVFE
Sbjct: 368 VNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRA-YGVVSMCIGTGMGAAAVFE 422
|
|
| RGD|1562373 Acaa1b "acetyl-Coenzyme A acyltransferase 1B" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1158 (412.7 bits), Expect = 1.4e-117, P = 1.4e-117
Identities = 237/418 (56%), Positives = 306/418 (73%)
Query: 19 SSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLL 78
+ ++ S A+ A+ CSAG + + A DVV+V RT I +A RGGFKDT D+LL
Sbjct: 12 AGRSESSSALQAAPCSAG----FPQASA--SDVVVVHGRRTPIGRAGRGGFKDTTPDELL 65
Query: 79 APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCS 138
+ VL AV++ +L P +GDI VG VL PG+ AM R+A F +G PETVPL VNRQCS
Sbjct: 66 SAVLTAVLQDVKLKPECLGDISVGNVLQPGAGAAM-ARIAQFLSGIPETVPLSAVNRQCS 124
Query: 139 SGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGIT 198
SGLQAVA++A I+ G YDIG+A G+ESMT++ G ++ ++ +ARDCL+PMGIT
Sbjct: 125 SGLQAVANIAGGIRNGSYDIGMACGVESMTLSERGNPGNISSRLLENEKARDCLIPMGIT 184
Query: 199 SENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTIS 258
SENVA+RFG++RQ+QD G F+ EI+PV T ++D K G K +T+S
Sbjct: 185 SENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTTVLDDK-GDRKTITVS 243
Query: 259 VDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGV 318
D+G+RP+TT+ LAKLKPAFK G+TTAGN+SQVSDGA AVLL +RS A + GLPILGV
Sbjct: 244 QDEGVRPSTTMEGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGV 303
Query: 319 FRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDP 378
RS++ VGV P +MGIGPA AIPAA++ AGL ++DI++FEINEAFASQ +YC++KLG+
Sbjct: 304 LRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQALYCVEKLGIPA 363
Query: 379 EKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436
EKVN GGA+ALGHPLG TGAR V TLL+E+KRRG+ +GV+SMCIG+GMGAAAVFE
Sbjct: 364 EKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMCIGTGMGAAAVFE 420
|
|
| UNIPROTKB|E2REH5 ACAA1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1157 (412.3 bits), Expect = 1.8e-117, P = 1.8e-117
Identities = 239/420 (56%), Positives = 305/420 (72%)
Query: 18 SSSQTSD-SPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADD 76
S SD +PA A+ C G A G A DDVV+V RTAI + RGGFKDT D+
Sbjct: 12 SGQPPSDGAPAPQAARCLGG-APG-----ASADDVVVVHGRRTAIGRGGRGGFKDTTPDE 65
Query: 77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQ 136
LL+ V+ AV++ RL+P+++GDI VG VL PG+ M R+A F + PETVPL TVNRQ
Sbjct: 66 LLSAVMTAVLQDVRLSPAQLGDICVGNVLQPGAGAIM-ARIAQFLSDIPETVPLSTVNRQ 124
Query: 137 CSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMG 196
CSSGLQA+A++A I+ G YDIG+A G+ESM++ G + ++ +ARDCL+PMG
Sbjct: 125 CSSGLQALANIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLVEKKKARDCLIPMG 184
Query: 197 ITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVT 256
ITSENVA+RFG++R++QD G F+ EI+PV T + D K G E+ +T
Sbjct: 185 ITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDK-GAERIIT 243
Query: 257 ISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPIL 316
++ D+GIRPNTT+ LAKLKPAFK+ G+TTAGN+SQVSDGA A+LL +RS A + GLP+L
Sbjct: 244 VAQDEGIRPNTTMEGLAKLKPAFKQGGSTTAGNSSQVSDGAAALLLARRSKAEELGLPVL 303
Query: 317 GVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL 376
GV RS++ VGV P +MGIGPA AIP A++ AGL + D+++FEINEAFASQ VYC++KLGL
Sbjct: 304 GVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVKDVDIFEINEAFASQAVYCVEKLGL 363
Query: 377 DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436
PEKVN GGAVALGHPLG TGAR V TLL+E+KRRGK +GV+SMCIG+GMGAAAVFE
Sbjct: 364 PPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRA-YGVVSMCIGTGMGAAAVFE 422
|
|
| MGI|MGI:2148491 Acaa1a "acetyl-Coenzyme A acyltransferase 1A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1155 (411.6 bits), Expect = 3.0e-117, P = 3.0e-117
Identities = 238/419 (56%), Positives = 306/419 (73%)
Query: 19 SSQTSDSPAISASICSAGEAAGYHRKP-AFDDDVVIVAAYRTAICKAKRGGFKDTLADDL 77
+ + S A+ A+ CSA R P A DVV+V RT I +A RGGFK+T D+L
Sbjct: 12 AGRPESSSALQAAPCSA-------RFPQASASDVVVVHGRRTPIGRASRGGFKNTTPDEL 64
Query: 78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQC 137
L+ VL AV++ RL P ++GDI VG VL PG+ M R+A F +G PETVPL TVNRQC
Sbjct: 65 LSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAGAVM-ARIAQFLSGIPETVPLSTVNRQC 123
Query: 138 SSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGI 197
SSGLQAVA++A I+ G YDIG+A G+ESM+++ + G ++ ++ +ARDCL PMG+
Sbjct: 124 SSGLQAVANIAGGIRNGSYDIGMACGVESMSLSGMGNPGNISSRLLESEKARDCLTPMGM 183
Query: 198 TSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTI 257
TSENVA+RFG++RQ+QD G F+ EI+PV T ++D K G +K +T+
Sbjct: 184 TSENVAERFGISRQKQDDFALASQQKAASAQSRGCFRAEIVPVTTTVLDDK-GDKKTITV 242
Query: 258 SVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILG 317
S D+G+RP+TT+ LAKLKPAFK G+TTAGN+SQVSDGA AVLL +RS A + GLPILG
Sbjct: 243 SQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILG 302
Query: 318 VFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLD 377
V RS++ VGV P VMGIGPA AIPAA++ AGL ++DI++FEINEAFASQ VYC++KLG+
Sbjct: 303 VLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQAVYCVEKLGIP 362
Query: 378 PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436
EKVN GGA+ALGHPLG TGAR V TLL+E+KRRG+ +GV+SMCIG+GMGAAAVFE
Sbjct: 363 AEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMCIGTGMGAAAVFE 420
|
|
| UNIPROTKB|F1NB64 ACAA1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1151 (410.2 bits), Expect = 7.9e-117, P = 7.9e-117
Identities = 229/388 (59%), Positives = 296/388 (76%)
Query: 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
+DVV+V RTAI +AKRGGFKDT D+LL+ V+ AV++ RL P +GDI VG VL PG
Sbjct: 37 EDVVVVHGRRTAIGRAKRGGFKDTTPDELLSAVMTAVLQDVRLRPEVLGDICVGNVLQPG 96
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
+ A+ R+A F +G PETVP +VNRQCSSGLQA+ ++A I+ G YDIG+A G+E+M+
Sbjct: 97 AG-ALIARVAQFLSGIPETVPCSSVNRQCSSGLQAIINIAGGIRNGSYDIGMACGVETMS 155
Query: 169 VNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXX 228
+ S + G ++ + ++ARDCL+PMGITSENVA++FG++R++QD
Sbjct: 156 LRSGNNPGDISSSMMENSKARDCLIPMGITSENVAEKFGISRKKQDAFALASQQKAAKAQ 215
Query: 229 XXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAG 288
G FK EI+PV T ++D + G +K +T+ D+G+RP+TT+ LAKLKPAFK++G+TTAG
Sbjct: 216 QMGLFKAEIVPVKTTVLDNE-GNQKTITVHQDEGVRPSTTLEGLAKLKPAFKENGSTTAG 274
Query: 289 NASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAG 348
NASQVSDGA AVLL KRS A+Q GLPILGV RSF+ VGV P VMGIGPA AIP AV+ AG
Sbjct: 275 NASQVSDGAAAVLLAKRSKAMQLGLPILGVLRSFAVVGVPPDVMGIGPAYAIPVAVQKAG 334
Query: 349 LQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSE 408
L ++DI+++EINEAFASQ VYC++KLG+ EKVN GGA+ALGHPLG TGAR V TLL+E
Sbjct: 335 LTLNDIDIYEINEAFASQAVYCVEKLGIPMEKVNPLGGAIALGHPLGCTGARQVVTLLNE 394
Query: 409 MKRRGKDCRFGVISMCIGSGMGAAAVFE 436
+KRRGK +GV+SMCIG+GMGAAAVFE
Sbjct: 395 LKRRGKRA-YGVVSMCIGTGMGAAAVFE 421
|
|
| MGI|MGI:3605455 Acaa1b "acetyl-Coenzyme A acyltransferase 1B" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1151 (410.2 bits), Expect = 7.9e-117, P = 7.9e-117
Identities = 238/418 (56%), Positives = 305/418 (72%)
Query: 19 SSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLL 78
+ + S A+ A+ CSAG + + A DVV+V RT I +A RG FKDT D+LL
Sbjct: 12 AGRPESSSALQAAPCSAG----FLQASA--SDVVVVHGRRTPIGRASRGCFKDTTPDELL 65
Query: 79 APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCS 138
+ VL AV++ +L P ++GDI VG VL PG+ M R+A F +G PETVPL TVNRQCS
Sbjct: 66 SAVLTAVLQDVKLKPEQLGDISVGNVLQPGAGAIM-ARIAQFLSGIPETVPLSTVNRQCS 124
Query: 139 SGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGIT 198
SGLQAVA++A I+ G YDIG+A G+ESMT++ G ++ ++ +ARDCL+PMGIT
Sbjct: 125 SGLQAVANIAGGIRNGSYDIGMACGVESMTLSQRGNHGNISSRLLENEKARDCLIPMGIT 184
Query: 199 SENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTIS 258
SENVA+RFGV+RQ+QD G F EI+PV T +++ K G +K +T+S
Sbjct: 185 SENVAERFGVSRQKQDAFALASQQKAASAQSRGCFHAEIVPVTTTVLNDK-GDKKTITVS 243
Query: 259 VDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGV 318
D+G+RP+TT+ LAKLKPAFK G+TTAGN+SQVSDGA AVLL +RS A + GLPILGV
Sbjct: 244 QDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGV 303
Query: 319 FRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDP 378
RS++ VGV P VMGIGPA AIPAA++ AGL ++DI++FEINEAFASQ VYC++KLG+
Sbjct: 304 LRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQAVYCVEKLGIPA 363
Query: 379 EKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436
EKVN GGA+ALGHPLG TGAR V TLL+E+KRRG+ +GV+SMCIG+GMGAAAVFE
Sbjct: 364 EKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMCIGTGMGAAAVFE 420
|
|
| UNIPROTKB|P09110 ACAA1 "3-ketoacyl-CoA thiolase, peroxisomal" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 228/387 (58%), Positives = 288/387 (74%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
DVV+V RTAIC+A RGGFKDT D+LL+ V+ AV++ L P ++GDI VG VL PG+
Sbjct: 37 DVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGA 96
Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
M R+A F + PETVPL TVNRQCSSGLQAVA +A I+ G YDIG+A G+ESM++
Sbjct: 97 GAIM-ARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSL 155
Query: 170 NSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXX 229
G + ++ +ARDCL+PMGITSENVA+RFG++R++QD
Sbjct: 156 ADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQS 215
Query: 230 XGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGN 289
G F+ EI+PV T + D K G ++ +T++ D+GIRP+TT+ LAKLKPAFKKDG+TTAGN
Sbjct: 216 KGCFQAEIVPVTTTVHDDK-GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGN 274
Query: 290 ASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGL 349
+SQVSDGA A+LL +RS A + GLPILGV RS++ VGV P +MGIGPA AIP A++ AGL
Sbjct: 275 SSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGL 334
Query: 350 QIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEM 409
+ D+++FEINEAFASQ YC++KL L PEKVN GGAVALGHPLG TGAR V TLL+E+
Sbjct: 335 TVSDVDIFEINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNEL 394
Query: 410 KRRGKDCRFGVISMCIGSGMGAAAVFE 436
KRRGK +GV+SMCIG+GMGAAAVFE
Sbjct: 395 KRRGKRA-YGVVSMCIGTGMGAAAVFE 420
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q66FR9 | FADA_YERPS | 2, ., 3, ., 1, ., 1, 6 | 0.4390 | 0.8242 | 0.9819 | yes | no |
| C6DI66 | FADA_PECCP | 2, ., 3, ., 1, ., 1, 6 | 0.4340 | 0.8242 | 0.9819 | yes | no |
| A1JIG3 | FADA_YERE8 | 2, ., 3, ., 1, ., 1, 6 | 0.4314 | 0.8242 | 0.9819 | yes | no |
| P09110 | THIK_HUMAN | 2, ., 3, ., 1, ., 1, 6 | 0.5555 | 0.9110 | 0.9905 | yes | no |
| P27796 | THIK_YEAST | 2, ., 3, ., 1, ., 1, 6 | 0.4936 | 0.8091 | 0.8944 | yes | no |
| A7ZU50 | FADA_ECO24 | 2, ., 3, ., 1, ., 1, 6 | 0.4314 | 0.8242 | 0.9819 | yes | no |
| Q8VCH0 | THIKB_MOUSE | 2, ., 3, ., 1, ., 1, 6 | 0.5740 | 0.9110 | 0.9905 | yes | no |
| Q8LF48 | THIK1_ARATH | 2, ., 3, ., 1, ., 1, 6 | 0.7666 | 0.9609 | 1.0 | no | no |
| Q05493 | THIK_YARLI | 2, ., 3, ., 1, ., 1, 6 | 0.5461 | 0.8221 | 0.9154 | yes | no |
| Q6DAP6 | FADA_ERWCT | 2, ., 3, ., 1, ., 1, 6 | 0.4365 | 0.8242 | 0.9819 | yes | no |
| Q8CQN7 | THLA_STAES | 2, ., 3, ., 1, ., 9 | 0.4154 | 0.8091 | 0.9467 | yes | no |
| Q570C8 | THIK5_ARATH | 2, ., 3, ., 1, ., 1, 6 | 0.7282 | 0.9804 | 0.9890 | no | no |
| Q1C2C3 | FADA_YERPA | 2, ., 3, ., 1, ., 1, 6 | 0.4390 | 0.8242 | 0.9819 | yes | no |
| B5FEW7 | FADA_VIBFM | 2, ., 3, ., 1, ., 1, 6 | 0.4210 | 0.8091 | 0.9638 | yes | no |
| A4TR28 | FADA_YERPP | 2, ., 3, ., 1, ., 1, 6 | 0.4390 | 0.8242 | 0.9819 | yes | no |
| Q1CNA0 | FADA_YERPN | 2, ., 3, ., 1, ., 1, 6 | 0.4390 | 0.8242 | 0.9819 | yes | no |
| A7MQM5 | FADA_CROS8 | 2, ., 3, ., 1, ., 1, 6 | 0.4289 | 0.8242 | 0.9819 | yes | no |
| Q921H8 | THIKA_MOUSE | 2, ., 3, ., 1, ., 1, 6 | 0.5727 | 0.9088 | 0.9882 | yes | no |
| Q5E8X7 | FADA_VIBF1 | 2, ., 3, ., 1, ., 1, 6 | 0.4185 | 0.8091 | 0.9638 | yes | no |
| P50174 | THIL_RHIME | 2, ., 3, ., 1, ., 9 | 0.4231 | 0.8177 | 0.9592 | yes | no |
| Q5HS07 | THLA_STAEQ | 2, ., 3, ., 1, ., 9 | 0.4154 | 0.8091 | 0.9467 | yes | no |
| A6TGM3 | FADA_KLEP7 | 2, ., 3, ., 1, ., 1, 6 | 0.4365 | 0.8242 | 0.9819 | yes | no |
| B6EGU1 | FADA_ALISL | 2, ., 3, ., 1, ., 1, 6 | 0.4122 | 0.8221 | 0.9793 | yes | no |
| P07871 | THIKB_RAT | 2, ., 3, ., 1, ., 1, 6 | 0.5717 | 0.9110 | 0.9905 | yes | no |
| Q6LW07 | FADA_PHOPR | 2, ., 3, ., 1, ., 1, 6 | 0.4137 | 0.8242 | 0.9819 | yes | no |
| A8ACZ3 | FADA_CITK8 | 2, ., 3, ., 1, ., 1, 6 | 0.4340 | 0.8242 | 0.9768 | yes | no |
| Q56WD9 | THIK2_ARATH | 2, ., 3, ., 1, ., 1, 6 | 0.7813 | 1.0 | 0.9978 | yes | no |
| B2VFE0 | FADA_ERWT9 | 2, ., 3, ., 1, ., 1, 6 | 0.4416 | 0.8242 | 0.9819 | yes | no |
| Q8ZAM9 | FADA_YERPE | 2, ., 3, ., 1, ., 1, 6 | 0.4390 | 0.8242 | 0.9819 | yes | no |
| P21775 | THIKA_RAT | 2, ., 3, ., 1, ., 1, 6 | 0.5648 | 0.9110 | 0.9905 | yes | no |
| O32177 | FADA_BACSU | 2, ., 3, ., 1, ., 1, 6 | 0.4910 | 0.8308 | 0.9795 | yes | no |
| A7FDF1 | FADA_YERP3 | 2, ., 3, ., 1, ., 1, 6 | 0.4390 | 0.8242 | 0.9819 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.983 |
| 3rd Layer | 2.3.1.16 | 0.979 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 461 | |||
| PLN02287 | 452 | PLN02287, PLN02287, 3-ketoacyl-CoA thiolase | 0.0 | |
| cd00751 | 386 | cd00751, thiolase, Thiolase are ubiquitous enzymes | 0.0 | |
| TIGR01930 | 386 | TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans | 1e-167 | |
| PRK05790 | 393 | PRK05790, PRK05790, putative acyltransferase; Prov | 1e-148 | |
| PRK07661 | 391 | PRK07661, PRK07661, acetyl-CoA acetyltransferase; | 1e-140 | |
| PRK09052 | 399 | PRK09052, PRK09052, acetyl-CoA acetyltransferase; | 1e-136 | |
| PRK07108 | 392 | PRK07108, PRK07108, acetyl-CoA acetyltransferase; | 1e-117 | |
| PRK09051 | 394 | PRK09051, PRK09051, beta-ketothiolase; Provisional | 1e-115 | |
| PRK08947 | 387 | PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed | 1e-114 | |
| PRK06445 | 394 | PRK06445, PRK06445, acetyl-CoA acetyltransferase; | 1e-107 | |
| COG0183 | 392 | COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid | 1e-106 | |
| PRK06205 | 404 | PRK06205, PRK06205, acetyl-CoA acetyltransferase; | 1e-103 | |
| PRK05656 | 393 | PRK05656, PRK05656, acetyl-CoA acetyltransferase; | 2e-99 | |
| TIGR02445 | 385 | TIGR02445, fadA, fatty oxidation complex, beta sub | 2e-98 | |
| PRK07851 | 406 | PRK07851, PRK07851, acetyl-CoA acetyltransferase; | 2e-95 | |
| TIGR02430 | 400 | TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase | 4e-95 | |
| PRK09050 | 401 | PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; | 5e-95 | |
| pfam00108 | 262 | pfam00108, Thiolase_N, Thiolase, N-terminal domain | 2e-94 | |
| PRK08235 | 393 | PRK08235, PRK08235, acetyl-CoA acetyltransferase; | 7e-92 | |
| PRK08242 | 402 | PRK08242, PRK08242, acetyl-CoA acetyltransferase; | 4e-90 | |
| PLN02644 | 394 | PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | 4e-87 | |
| PRK13359 | 400 | PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; | 4e-85 | |
| PRK08131 | 401 | PRK08131, PRK08131, acetyl-CoA acetyltransferase; | 9e-85 | |
| PRK07801 | 382 | PRK07801, PRK07801, acetyl-CoA acetyltransferase; | 3e-84 | |
| PRK06633 | 392 | PRK06633, PRK06633, acetyl-CoA acetyltransferase; | 5e-82 | |
| PRK08963 | 428 | PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | 6e-82 | |
| PRK07850 | 387 | PRK07850, PRK07850, acetyl-CoA acetyltransferase; | 1e-80 | |
| PRK06504 | 390 | PRK06504, PRK06504, acetyl-CoA acetyltransferase; | 2e-80 | |
| PRK06690 | 361 | PRK06690, PRK06690, acetyl-CoA acetyltransferase; | 4e-78 | |
| PRK08170 | 426 | PRK08170, PRK08170, acetyl-CoA acetyltransferase; | 8e-78 | |
| PRK06954 | 397 | PRK06954, PRK06954, acetyl-CoA acetyltransferase; | 6e-70 | |
| PRK06025 | 417 | PRK06025, PRK06025, acetyl-CoA acetyltransferase; | 3e-68 | |
| PRK06366 | 388 | PRK06366, PRK06366, acetyl-CoA acetyltransferase; | 3e-65 | |
| PRK09268 | 427 | PRK09268, PRK09268, acetyl-CoA acetyltransferase; | 1e-63 | |
| TIGR02446 | 430 | TIGR02446, FadI, fatty oxidation complex, beta sub | 7e-61 | |
| pfam02803 | 123 | pfam02803, Thiolase_C, Thiolase, C-terminal domain | 1e-60 | |
| cd00826 | 393 | cd00826, nondecarbox_cond_enzymes, nondecarboxylat | 2e-53 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 4e-17 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 7e-15 | |
| PRK06064 | 389 | PRK06064, PRK06064, acetyl-CoA acetyltransferase; | 7e-11 | |
| PRK12578 | 385 | PRK12578, PRK12578, acetyl-CoA acetyltransferase; | 3e-10 | |
| PTZ00455 | 438 | PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provi | 5e-08 | |
| PRK06289 | 403 | PRK06289, PRK06289, acetyl-CoA acetyltransferase; | 2e-05 | |
| PRK07516 | 389 | PRK07516, PRK07516, acetyl-CoA acetyltransferase; | 4e-05 | |
| COG0304 | 412 | COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy | 5e-05 | |
| PRK08256 | 391 | PRK08256, PRK08256, lipid-transfer protein; Provis | 8e-05 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 1e-04 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 0.001 | |
| cd00830 | 320 | cd00830, KAS_III, Ketoacyl-acyl carrier protein sy | 0.003 |
| >gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Score = 851 bits (2201), Expect = 0.0
Identities = 375/455 (82%), Positives = 416/455 (91%), Gaps = 3/455 (0%)
Query: 1 MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
MEKA++RQR+LL+HL+PSSS + ++SAS C+AG++A YHR AF DDVVIVAAYRT
Sbjct: 1 MEKAINRQRVLLRHLRPSSS---EPSSLSASACAAGDSAAYHRTTAFGDDVVIVAAYRTP 57
Query: 61 ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
ICKAKRGGFKDT DDLLAPVLKAV+EKT LNPSEVGDIVVGTVLAPGS RA ECRMAAF
Sbjct: 58 ICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAF 117
Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
YAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AG+ESMT N ++ G VNP
Sbjct: 118 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNP 177
Query: 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240
+VE F+QA+DCLLPMGITSENVA+RFGVTR+EQD AAVESHR+AAAATASGKFKDEI+PV
Sbjct: 178 RVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPV 237
Query: 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
+TKIVDPKTG EK + ISVDDGIRPNTT+ADLAKLKP FKK+GTTTAGN+SQVSDGAGAV
Sbjct: 238 HTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGAV 297
Query: 301 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360
LLMKRS+A+QKGLPILGVFRSF+AVGVDP+VMGIGPAVAIPAAVK+AGL++DDI+LFEIN
Sbjct: 298 LLMKRSVAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDIDLFEIN 357
Query: 361 EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGV 420
EAFASQ+VYC KKLGLDPEKVNVNGGA+ALGHPLGATGARCVATLL EMKRRGKDCRFGV
Sbjct: 358 EAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRGKDCRFGV 417
Query: 421 ISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTH 455
+SMCIG+GMGAAAVFERGD VDEL NAR V +
Sbjct: 418 VSMCIGTGMGAAAVFERGDSVDELSNARKVEGNNL 452
|
Length = 452 |
| >gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 513 bits (1323), Expect = 0.0
Identities = 206/396 (52%), Positives = 266/396 (67%), Gaps = 20/396 (5%)
Query: 52 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR 111
VIV+A RT I + G KD ADDL A V+KA++E+ L+P EV D+++G VL G +
Sbjct: 1 VIVSAVRTPIGRFG-GALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQ 59
Query: 112 AMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNS 171
R AA AG PE+VP TVNR C SGLQAVA A +I AG D+ +A G+ESM+
Sbjct: 60 NP-ARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAP 118
Query: 172 ISV----------VGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESH 221
+ + ++ ++ L MGIT+ENVA+++G++R+EQD A+ SH
Sbjct: 119 YLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSH 178
Query: 222 RRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281
+RAAAA +G+FKDEI+PV G + V + D+G RP+TT+ LAKLKPAFKK
Sbjct: 179 QRAAAAQEAGRFKDEIVPVEVP------GRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKK 232
Query: 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIP 341
DGT TAGNAS ++DGA AVLLM A + GL L ++ GVDP++MGIGP AIP
Sbjct: 233 DGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIP 292
Query: 342 AAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARC 401
A+K AGL +DDI+L EINEAFA+Q + C+K+LGLDPEKVNVNGGA+ALGHPLGA+GAR
Sbjct: 293 KALKRAGLTLDDIDLIEINEAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARI 352
Query: 402 VATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
V TLL E+KRRG R+G+ +MCIG G GAA V ER
Sbjct: 353 VVTLLHELKRRGG--RYGLATMCIGGGQGAAMVIER 386
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386 |
| >gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Score = 474 bits (1222), Expect = e-167
Identities = 199/396 (50%), Positives = 254/396 (64%), Gaps = 22/396 (5%)
Query: 53 IVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRA 112
IVAA RT I K G KD A+DL A V+K ++E+ L+P + D++ G VL G
Sbjct: 1 IVAAARTPIGKFG-GSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQ-Q 58
Query: 113 MECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSI 172
R AA AG PE+VP TVNRQC+SGLQAV A I+AG D+ +A G+ESM+
Sbjct: 59 NIARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPY 118
Query: 173 SV----VGQVNPKVEIFTQARDCL--------LPMGITSENVAQRFGVTRQEQDLAAVES 220
SV V P L MG+T+EN+A+++G++R+EQD A+ S
Sbjct: 119 SVPRSRRWGVKPGNAELEDQILKDGLDDPLNGLSMGLTAENLAKKYGISREEQDEYALRS 178
Query: 221 HRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
H+RAA A G FKDEI+PV + K V +S D+GIRPNTT+ LAKLKPAF
Sbjct: 179 HQRAAKAWEEGLFKDEIVPV--SVKGRKGPV----VVSSDEGIRPNTTLEKLAKLKPAFD 232
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
+GT TAGN+S ++DGA A+LLM A + GL L S++ GVDP +MG+GP AI
Sbjct: 233 PNGTVTAGNSSPLNDGAAALLLMSEEKAKELGLTPLARIVSYAVAGVDPEIMGLGPVPAI 292
Query: 341 PAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGAR 400
P A+K AGL I DI+LFEINEAFA+Q + CIK+LGLD EKVNVNGGA+ALGHPLGA+GAR
Sbjct: 293 PKALKKAGLSISDIDLFEINEAFAAQVLACIKELGLDLEKVNVNGGAIALGHPLGASGAR 352
Query: 401 CVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436
V TLL E+KRRG R+G+ ++CIG G G A + E
Sbjct: 353 IVTTLLHELKRRGG--RYGLATICIGGGQGIAVILE 386
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386 |
| >gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 426 bits (1098), Expect = e-148
Identities = 192/400 (48%), Positives = 256/400 (64%), Gaps = 20/400 (5%)
Query: 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
DVVIV+A RT I K G KD A +L A V+KA +E+ + P +V ++++G VL G
Sbjct: 2 KDVVIVSAARTPIGKFG-GALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAG 60
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
+ + R AA AG P VP T+N+ C SGL+AVA A AI+AG DI +A G ESM+
Sbjct: 61 AGQ-NPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMS 119
Query: 169 ----VNSISVVGQVNPKVEIF-TQARDCL------LPMGITSENVAQRFGVTRQEQDLAA 217
V S GQ VE+ T D L MGIT+EN+A+++G+TR+EQD A
Sbjct: 120 QAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFA 179
Query: 218 VESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277
+ S ++A AA +G+FKDEI+PV K V + D+ RP+TT LAKL+P
Sbjct: 180 LASQQKAEAAIKAGRFKDEIVPVTIK-----QRKGDPVVVDTDEHPRPDTTAESLAKLRP 234
Query: 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPA 337
AF KDGT TAGNAS ++DGA AV++M + A + GL L S++ GVDP++MGIGP
Sbjct: 235 AFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPV 294
Query: 338 VAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGAT 397
AI A++ AG + D++L EINEAFA+Q + K+LGLDPEKVNVNGGA+ALGHP+GA+
Sbjct: 295 PAIRKALEKAGWSLADLDLIEINEAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGAS 354
Query: 398 GARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
GAR + TLL EMKRRG + G+ ++CIG G G A + ER
Sbjct: 355 GARILVTLLHEMKRRGA--KKGLATLCIGGGQGVALIVER 392
|
Length = 393 |
| >gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 406 bits (1046), Expect = e-140
Identities = 189/391 (48%), Positives = 254/391 (64%), Gaps = 10/391 (2%)
Query: 52 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR 111
VIVA RT + KAK+G K DDL A V+K +++ + D+++G + P + +
Sbjct: 5 VIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAM-PEAEQ 63
Query: 112 AME-CRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
+ R AG P TVP T+NR CSSGLQ++A A I G + IA G ESM++
Sbjct: 64 GLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSL- 122
Query: 171 SISVVGQV-NPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229
+ ++G V P + A + + MG T+E VA ++G++R++QD AV SH+RAA A A
Sbjct: 123 -VPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAVKYGISREDQDAFAVRSHQRAAKALA 181
Query: 230 SGKFKDEIIPVN---TKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTT 286
GKF DEI+PV+ + + E+ +T S D+G+R +TT+ L KL+PAF G+ T
Sbjct: 182 EGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVKGSVT 241
Query: 287 AGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKS 346
AGN+SQ+SDGA AVLLM R A GL L FRSF+ GV P VMGIGP AIP A+K
Sbjct: 242 AGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKL 301
Query: 347 AGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLL 406
AGL++ DI LFE+NEAFASQ + I++LGLD EKVNVNGGA+ALGHPLG TGA+ +L+
Sbjct: 302 AGLELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLI 361
Query: 407 SEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
EMKRR + +FG+++MCIG GMGAA VFE
Sbjct: 362 HEMKRRNE--QFGIVTMCIGGGMGAAGVFEL 390
|
Length = 391 |
| >gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 396 bits (1020), Expect = e-136
Identities = 185/400 (46%), Positives = 256/400 (64%), Gaps = 20/400 (5%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPG 108
D IVAA RT + KA RG FK+T DDLLA VL++ + + L+P + D +VG +
Sbjct: 7 DAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEA 66
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
R+ A AG P +V TVNR C+SGLQAVA A I+ G D+ IAAG+ESM+
Sbjct: 67 EQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMS 126
Query: 169 V-----NSISVVGQVNPKVEIFTQARDCLLP--MGITSENVAQRFGVTRQEQDLAAVESH 221
+ N S+ +P IF + + + MG+T+E VA+++ V+R++QD A+ESH
Sbjct: 127 MVPMMGNKPSM----SP--AIFARDENVGIAYGMGLTAEKVAEQWKVSREDQDAFALESH 180
Query: 222 RRAAAATASGKFKDEIIP--VNTKIVDPKTG--VEKRVTISVDDGIRPNTTIADLAKLKP 277
++A AA +G+FKDEI P + + D TG K T+ +D+G R +T++ LAKLKP
Sbjct: 181 QKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKP 240
Query: 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPA 337
F G+ TAGN+SQ SDGAGAV+L+ Q L L F SF+ GV P +MGIGP
Sbjct: 241 VFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPI 300
Query: 338 VAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGAT 397
AIPAA+K AGL+ DD++ E+NEAFA+Q + I+ LGLDP KVN GGA+ALGHPLGAT
Sbjct: 301 EAIPAALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGAT 360
Query: 398 GARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
GA AT++ ++R ++G+++MC+G+GMGAA +FER
Sbjct: 361 GAIRTATVVHGLRRTNL--KYGMVTMCVGTGMGAAGIFER 398
|
Length = 399 |
| >gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 348 bits (895), Expect = e-117
Identities = 178/403 (44%), Positives = 248/403 (61%), Gaps = 31/403 (7%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
+ VIV+ RT + K+ RG F T L V++ +E+ +L+P+EV D+++G G+
Sbjct: 3 EAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGA 62
Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
T A R A AG P TVP TVNR CSSGLQ +A A + AG D+ +A G+ES
Sbjct: 63 TGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVES--- 119
Query: 170 NSISVVGQ------------VNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAA 217
IS V V K EI+ M T+ENVA+R+G++++ QD
Sbjct: 120 --ISCVQNEMNRHMLREGWLVEHKPEIY-------WSMLQTAENVAKRYGISKERQDEYG 170
Query: 218 VESHRRAAAATASGKFKDEIIP--VNTKIVDPKTG--VEKRVTISVDDGIRPNTTIADLA 273
V+S +RAAAA A+G+F DEI+P V + D TG K VT+S D+GIRP+TT+ ++
Sbjct: 171 VQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVS 230
Query: 274 KLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMG 333
K++ A G TAGNASQ SDGA A ++M +A ++GL LG+FR F+ G +P MG
Sbjct: 231 KIRSALP-GGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMG 289
Query: 334 IGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHP 393
IGP A+P +K AGL++DDI+L+E+NEAFA Q +YC LG+ +++NVNGGA+A+GHP
Sbjct: 290 IGPVFAVPKLLKQAGLKVDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHP 349
Query: 394 LGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436
G +GAR L E KRRG ++ V++MCIG G GAA +FE
Sbjct: 350 YGVSGARLTGHALIEGKRRG--AKYVVVTMCIGGGQGAAGLFE 390
|
Length = 392 |
| >gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Score = 343 bits (883), Expect = e-115
Identities = 169/403 (41%), Positives = 234/403 (58%), Gaps = 28/403 (6%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLAD----DLLAPVLKAVIEKTRLNPSEVGDIVVGTVL 105
+VV+V+ RTAI G F +L D DL A V++ + + ++P +VG +V G V+
Sbjct: 4 EVVVVSGVRTAI-----GTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVI 58
Query: 106 APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLE 165
R+AA AG P+ P VNR C SGLQA+ A AI G D+ I G E
Sbjct: 59 PTEPRDMYLSRVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAE 118
Query: 166 SMTVNSISVVGQVNPKVEIFTQARDCLL----------PMGITSENVAQRFGVTRQEQDL 215
SM+ + + D ++ MG+T+ENVA ++G++R+ QD
Sbjct: 119 SMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGVTAENVAAKYGISREAQDA 178
Query: 216 AAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKL 275
A+ESHRRAAAA A+G FKD+I+PV K + G V D+ +R +TT+ DLAKL
Sbjct: 179 LALESHRRAAAAIAAGYFKDQIVPVEIKT---RKGE---VVFDTDEHVRADTTLEDLAKL 232
Query: 276 KPAFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGI 334
KP FKK+ GT TAGNAS ++DGA AV+L + A +GL L ++ GVDP MGI
Sbjct: 233 KPVFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGI 292
Query: 335 GPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPL 394
GP A A++ AGL + D+++ E NEAFA+Q ++LGLDP KVN NG ++LGHP+
Sbjct: 293 GPVPATQKALERAGLTVADLDVIEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPV 352
Query: 395 GATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
GATGA L E++R G R+ +++MCIG G G AA+FER
Sbjct: 353 GATGAIITVKALYELQRIGG--RYALVTMCIGGGQGIAAIFER 393
|
Length = 394 |
| >gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 341 bits (878), Expect = e-114
Identities = 177/396 (44%), Positives = 241/396 (60%), Gaps = 20/396 (5%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTV---L 105
DVVIV A RT + ++K G F++ A+DL A ++++++ + L+P+E+ DI+ G V L
Sbjct: 3 DVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTL 62
Query: 106 APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLE 165
G A R AA AG P +VP TVNR C S +QA+ D A AI G D+ + G+E
Sbjct: 63 EQGFNIA---RNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVE 119
Query: 166 SMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAA 225
M + + V+ + MG+T+E + + G++R++QD A SH+RA
Sbjct: 120 HM--GHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGKMHGISREQQDAFAARSHQRAW 177
Query: 226 AATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK-KDGT 284
AAT G+FK+EIIP D GV K D+ IRP TT+ LA L+PAF +GT
Sbjct: 178 AATQEGRFKNEIIPTEGHDAD---GVLKLFDY--DEVIRPETTVEALAALRPAFDPVNGT 232
Query: 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAV 344
TAG +S +SDGA A+L+M S A + GL RS + G DPS+MG GP A A+
Sbjct: 233 VTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKAL 292
Query: 345 KSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARC 401
K AGL I DI++FE+NEAFA+Q + C+K LGL EKVN+NGGA+ALGHPLG +GAR
Sbjct: 293 KRAGLSISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARI 352
Query: 402 VATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
TLL+ M+R KD +FG+ +MCIG G G A VFER
Sbjct: 353 STTLLNLMER--KDAQFGLATMCIGLGQGIATVFER 386
|
Length = 387 |
| >gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 324 bits (832), Expect = e-107
Identities = 161/400 (40%), Positives = 231/400 (57%), Gaps = 19/400 (4%)
Query: 49 DDVVIVAAYRTAICKAK-----RGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGT 103
+DV +V RTA + + + F + ++L A ++ +IEKT + P E+ DI+ G
Sbjct: 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGC 61
Query: 104 VLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAG 163
L G R F A P +P V+RQC+S L V+ A I G+ DI IA G
Sbjct: 62 ALQVGENWLYGGRHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGG 121
Query: 164 LESMTVNSISVVGQVNPKVEIFTQAR------DCLLPMGITSENVAQRFGVTRQEQDLAA 217
+E MT + + P ++ T + MG+T+E +A+ G+ R+E D +
Sbjct: 122 VEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIKREEMDRWS 181
Query: 218 VESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277
+ SH+ AA A G FKDEI+P+ ++ K+ + VD +RP+T++ LAKL P
Sbjct: 182 LRSHQLAAKAIQEGYFKDEILPIEVEVEG------KKKVVDVDQSVRPDTSLEKLAKLPP 235
Query: 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPA 337
AFK DG TAGN+S ++ GA VLLM + + GL + RSF GV P++MG GP
Sbjct: 236 AFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPV 295
Query: 338 VAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGAT 397
A A++ AGL + DI+L+EINEAFA +Y IK+LGLDPE VN+ GGA+A+GHPLGAT
Sbjct: 296 PASKKALEKAGLSVKDIDLWEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGAT 355
Query: 398 GARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
GAR V TL +++ +GKD +GV ++C+G G G A V ER
Sbjct: 356 GARIVGTLARQLQIKGKD--YGVATLCVGGGQGGAVVLER 393
|
Length = 394 |
| >gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 321 bits (825), Expect = e-106
Identities = 159/405 (39%), Positives = 223/405 (55%), Gaps = 29/405 (7%)
Query: 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR--LNPSEVGDIVVGTVL 105
DV IV A RT K G + A+ L A ++ A +E+ ++ ++V D+++G VL
Sbjct: 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVL 60
Query: 106 APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLE 165
G R AA AG P +VP TVNR C+SGL AV A AI +G D+ +A G+E
Sbjct: 61 QAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVE 120
Query: 166 SMTVNSISVVGQ------VNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVE 219
M+ + G V+P E MG+T+E A+R+G++R++QD AV+
Sbjct: 121 KMSDAPMGREGVRVLDSAVDPMFEDPLGDATPGYLMGLTAERYAKRYGISREDQDEVAVK 180
Query: 220 SHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPN--TTIADLAKLKP 277
SH+ AAA +G F DEI P + V + D R + T A L P
Sbjct: 181 SHKNAAANPKAGFF-DEITPED---------VLNSP-VVADPLRRLDCSPTSDGAAALVP 229
Query: 278 AFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGP 336
AF++ GT TAGNAS ++DGA A+LLM S A + GL L R+++ GVDPS+M GP
Sbjct: 230 AFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DGP 288
Query: 337 AVAIPAAVKSAGLQ-IDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLG 395
A+ A+ AGL ++D+ L E EAFA+ + K LG P VN +GGA+ALGHP+G
Sbjct: 289 VAAVHDALTIAGLLALEDLGLAEKGEAFAAVALGVTKILGDLP--VNPSGGAIALGHPIG 346
Query: 396 ATGARCVATLLSEMKRRGK--DCRFGVISMCIG-SGMGAAAVFER 437
ATGAR + L +++ RG+ R G+ ++CIG G G AAV ER
Sbjct: 347 ATGARILVELARQLRGRGQVVAKRRGLATLCIGGGGQGVAAVLER 391
|
Length = 392 |
| >gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 313 bits (805), Expect = e-103
Identities = 168/423 (39%), Positives = 238/423 (56%), Gaps = 58/423 (13%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
D VI RT + + G FKD A++L A V++A++E+T ++P+ + D++ G G
Sbjct: 3 DAVICEPVRTPVGRFG-GAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGE 61
Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
A+ R+AA AG P TVP ++R+C SGLQAV A ++ G D+ IA G ESM+
Sbjct: 62 APAIG-RVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMS- 119
Query: 170 NSISVVGQVNPKVEIFT------------QARDCL-------------LPMGI--TSENV 202
VE +T Q D L +P G+ T+EN+
Sbjct: 120 -----------NVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIETAENL 168
Query: 203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVN--TKIVDPKTGVEKRVTISVD 260
+ +G++R+EQD AV SH+RA AA +G+F DEI+PV + DP + D
Sbjct: 169 RREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDP-------TVVDRD 221
Query: 261 DGIRPNTTIADLAKLKP---AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILG 317
+ R +TT+ LAKL+P + T TAGNAS +D A A L+ A + GL L
Sbjct: 222 EHPRADTTLESLAKLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLA 281
Query: 318 VFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL- 376
S++ GV+PS MGIGP A A+ AGL +DDI+L E+NEAFA+Q + +K+ G
Sbjct: 282 RLVSWAVAGVEPSRMGIGPVPATEKALARAGLTLDDIDLIELNEAFAAQVLAVLKEWGFG 341
Query: 377 --DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAV 434
D E++NVNG ++LGHP+GATG R +ATLL E++RR R+G+ +MCIG G G AAV
Sbjct: 342 ADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRR--QARYGLETMCIGGGQGLAAV 399
Query: 435 FER 437
FER
Sbjct: 400 FER 402
|
Length = 404 |
| >gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 302 bits (776), Expect = 2e-99
Identities = 169/404 (41%), Positives = 247/404 (61%), Gaps = 28/404 (6%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLAD----DLLAPVLKAVIEKTRLNPSEVGDIVVGTVL 105
DVVIVAA RTAI G F+ +LA+ +L A V++ ++E+T L+P++V ++++G VL
Sbjct: 3 DVVIVAATRTAI-----GSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVL 57
Query: 106 APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLE 165
G+ + R AA AG P +VP T+N+ C SGL+A+ A AI+ G ++ IA G E
Sbjct: 58 TAGAGQN-PARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQE 116
Query: 166 SMTVNSISVVGQVNPKVEIFTQARDCLLP-----------MGITSENVAQRFGVTRQEQD 214
+M++ + G Q D ++ MGIT+EN+ +++G++R+ QD
Sbjct: 117 NMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQD 176
Query: 215 LAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAK 274
A S ++A AA +G+F DEI P+ ++ + G + + + D+ R TT LAK
Sbjct: 177 AFAAASQQKAVAAIEAGRFDDEITPI---LIPQRKG--EPLAFATDEQPRAGTTAESLAK 231
Query: 275 LKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGI 334
LKPAFKKDG+ TAGNAS ++DGA AVLLM + A GLP+L +++ GVDP++MGI
Sbjct: 232 LKPAFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGI 291
Query: 335 GPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPL 394
GP A + AG + +++L E NEAFA+Q + K+LG D KVNVNGGA+ALGHP+
Sbjct: 292 GPVSATRRCLDKAGWSLAELDLIEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPI 351
Query: 395 GATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFERG 438
GA+G R + TLL EM RR D + G+ ++CIG G G A ER
Sbjct: 352 GASGCRVLVTLLHEMIRR--DAKKGLATLCIGGGQGVALAIERD 393
|
Length = 393 |
| >gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Score = 300 bits (769), Expect = 2e-98
Identities = 174/396 (43%), Positives = 234/396 (59%), Gaps = 20/396 (5%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTV---L 105
DVVIV RT + ++K G F++T A+DL A ++ ++ + +++P+EV DI G V L
Sbjct: 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTL 60
Query: 106 APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLE 165
G A R AA A P T TVNR C S +QA+ D A AI G D+ + G+E
Sbjct: 61 EQGFNIA---RNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVE 117
Query: 166 SMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAA 225
M + ++ V+ + MG+T+E + + G++R++QD A SH RA
Sbjct: 118 HM--GHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGKMHGISREQQDAFAARSHARAH 175
Query: 226 AATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK-KDGT 284
AAT GKFK+EIIP D G K D+ IRP TT+ LA L+PAF K+GT
Sbjct: 176 AATQEGKFKNEIIPTQGHDAD---GFLK--QFDYDEVIRPETTVESLAALRPAFDPKNGT 230
Query: 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAV 344
TAG +S +SDGA A+L+M A + GL RS + G DPS+MG GP A A+
Sbjct: 231 VTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKAL 290
Query: 345 KSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARC 401
K AGL I DI++FE+NEAFA+Q + C+K LGL EKVN+NGGA+ALGHPLG +GAR
Sbjct: 291 KRAGLSISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARI 350
Query: 402 VATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
TLL+ M++ KD FG+ +MCIG G G A VFER
Sbjct: 351 STTLLNLMEQ--KDATFGLATMCIGLGQGIATVFER 384
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 385 |
| >gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 293 bits (752), Expect = 2e-95
Identities = 169/414 (40%), Positives = 235/414 (56%), Gaps = 38/414 (9%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPG 108
+ VIV+ R+ I +A +G KD DDL A +++A ++K L+P+++ D+++G L G
Sbjct: 3 EAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGG 62
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
R+ A G+ +P TVNR CSS LQ AIKAG D+ I+AG+E+++
Sbjct: 63 EQGFNMARVVAVLLGYD-FLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVS 121
Query: 169 V----NSISVVGQVNPK---------------VEIFTQAR-DCLLP-----MGITSENVA 203
NS S+ NP E + R D LLP MG T+ENVA
Sbjct: 122 RFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGLLPDVYIAMGQTAENVA 181
Query: 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGI 263
Q G++R+EQD V S RA A A+G F+ EI PV P V +S DDG
Sbjct: 182 QLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTL----PDGTV-----VSTDDGP 232
Query: 264 RPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFS 323
R TT +++LKP F+ DGT TAGNA ++DGA AV++M + A + GL L S
Sbjct: 233 RAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTG 292
Query: 324 AVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNV 383
G+ P +MG+GP A A+ AG+ IDDI+L EINEAFA+Q + ++LG+D +K+NV
Sbjct: 293 VSGLSPEIMGLGPVEASKQALARAGMSIDDIDLVEINEAFAAQVLPSARELGIDEDKLNV 352
Query: 384 NGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
+GGA+ALGHP G TGAR TLL+ ++ K FG+ +MC+G G G A V ER
Sbjct: 353 SGGAIALGHPFGMTGARITTTLLNNLQTHDK--TFGLETMCVGGGQGMAMVLER 404
|
Length = 406 |
| >gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase | Back alignment and domain information |
|---|
Score = 292 bits (748), Expect = 4e-95
Identities = 166/411 (40%), Positives = 231/411 (56%), Gaps = 36/411 (8%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPG 108
+ I A RT I + G ADDL A +KA++ + +L+ + + D++ G G
Sbjct: 2 EAYICDAIRTPIGRYG-GSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAG 60
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
RMAA AG P +VP TVNR C SGL A+ A AIKAG D+ IA G+ESM+
Sbjct: 61 EDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMS 120
Query: 169 VNSISVVGQ--------------------VNPKVEIFTQARDCLLPMGITSENVAQRFGV 208
+ V+G+ +NP + +A + M T+ENVA+ FG+
Sbjct: 121 -RAPFVMGKADSAFSRSAKIEDTTIGWRFINPLM----KALYGVDSMPETAENVAEEFGI 175
Query: 209 TRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTT 268
+R++QD A+ S +R AAA ASG F +EI+PV ++ K G + D+ RP TT
Sbjct: 176 SREDQDAFALRSQQRTAAAQASGFFAEEIVPV---VIPQKKGEP--TVVDQDEHPRPETT 230
Query: 269 IADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD 328
+ LAKLKP + DGT TAGNAS V+DGA A+LL + GL + + GV+
Sbjct: 231 LEGLAKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVE 290
Query: 329 PSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL--DPEKVNVNGG 386
P +MGIGP A + AGL ID ++ E+NEAFA+Q + +++LGL D +VN NGG
Sbjct: 291 PRIMGIGPVPATQKLLARAGLSIDQFDVIELNEAFAAQALAVLRELGLADDDARVNPNGG 350
Query: 387 AVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
A+ALGHPLGA+GAR V T L +++R G R+ + +MCIG G G A ER
Sbjct: 351 AIALGHPLGASGARLVLTALRQLERSGG--RYALCTMCIGVGQGIALAIER 399
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. Length = 400 |
| >gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Score = 291 bits (748), Expect = 5e-95
Identities = 167/415 (40%), Positives = 231/415 (55%), Gaps = 44/415 (10%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPG 108
+ I A RT I + G ADDL A LKA++ + ++ V D++ G G
Sbjct: 3 EAFICDAIRTPIGRYG-GALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAG 61
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
RM+A AG P +VP T+NR C SG+ AV A AIKAG ++ IA G+ESM+
Sbjct: 62 EDNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMS 121
Query: 169 VNSISVVGQ--------------------VNPKVEIFTQARDCLLPMGITSENVAQRFGV 208
+ V+G+ VNP + +A+ + M T+ENVA+ + +
Sbjct: 122 -RAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLM----KAQYGVDSMPETAENVAEDYNI 176
Query: 209 TRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTT 268
+R +QD A+ S +RAAAA A+G +EI+PV I K V + D+ RP TT
Sbjct: 177 SRADQDAFALRSQQRAAAAQAAGFLAEEIVPV--TIPQKKGDP---VVVDRDEHPRPETT 231
Query: 269 IADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLP----ILGVFRSFSA 324
+ LAKLKP F+ DGT TAGNAS V+DGA A+LL + A + GL ILG +
Sbjct: 232 LEALAKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILG----MAT 287
Query: 325 VGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL--DPEKVN 382
GV+P +MGIGPA A + GL ID ++ E+NEAFA+Q + +++LGL D +VN
Sbjct: 288 AGVEPRIMGIGPAPATRKLLARLGLTIDQFDVIELNEAFAAQGLAVLRQLGLADDDARVN 347
Query: 383 VNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
NGGA+ALGHPLG +GAR V T L +++R G R+ + +MCIG G G A ER
Sbjct: 348 PNGGAIALGHPLGMSGARLVLTALHQLERTGG--RYALCTMCIGVGQGIALAIER 400
|
Length = 401 |
| >gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain | Back alignment and domain information |
|---|
Score = 285 bits (731), Expect = 2e-94
Identities = 121/269 (44%), Positives = 167/269 (62%), Gaps = 19/269 (7%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
DVVIV+A RT I + G KD A DL A +KA +E+ + P +V ++++G VL G
Sbjct: 1 DVVIVSAARTPI-GSFGGSLKDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGE 59
Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT- 168
R AA AG P++VP T+N+ C SGL+AVA A AI+AG DI +A G+ESM+
Sbjct: 60 G-QNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVESMSN 118
Query: 169 ----VNSISVVGQVNPKVEIFTQARD------CLLPMGITSENVAQRFGVTRQEQDLAAV 218
+ + V ++ + T +D L+ MGIT+ENVA+++G++R+EQD A+
Sbjct: 119 APYVLPASRVGARMGDAKLVDTMLKDGLTDAFNLIHMGITAENVAKKYGISREEQDEFAL 178
Query: 219 ESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278
S ++AAAA +GKFKDEI+PV K K + + D+GIRP TT+ LAKLKPA
Sbjct: 179 RSQQKAAAAQKAGKFKDEIVPVTIKGRK-----GKPLVVDKDEGIRPGTTLESLAKLKPA 233
Query: 279 FKKD-GTTTAGNASQVSDGAGAVLLMKRS 306
F K+ GT TAGNAS ++DGA AVLLM S
Sbjct: 234 FDKENGTVTAGNASGLNDGAAAVLLMSES 262
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262 |
| >gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 283 bits (727), Expect = 7e-92
Identities = 153/397 (38%), Positives = 226/397 (56%), Gaps = 22/397 (5%)
Query: 52 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR 111
VIV+A RT K G KD A +L +K +E+ ++ +V ++++GTVL G +
Sbjct: 5 VIVSAARTPFGKFG-GSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQ 63
Query: 112 AMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNS 171
+ R AA AG P V TVN+ C+SGL+AV I+AG + +A G+ESM+ N+
Sbjct: 64 -IPSRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMS-NA 121
Query: 172 ISVVGQVNPKVEI-FTQARDCLL-----------PMGITSENVAQRFGVTRQEQDLAAVE 219
++ + + D ++ MG+ VA+ G++R+ QD A
Sbjct: 122 PYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELGISREAQDEWAYR 181
Query: 220 SHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF 279
SH+RA +A G+F++EI+PV + + G + ++ D+ R +TTI LAKLKP F
Sbjct: 182 SHQRAVSAHEEGRFEEEIVPVT---IPQRKG--DPIVVAKDEAPRKDTTIEKLAKLKPVF 236
Query: 280 KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVA 339
K GT TAGNA V+DGA A++LM A Q+G L + +A+ V+ P A
Sbjct: 237 DKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYA 296
Query: 340 IPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGA 399
I A ++ G ++DI+LFEINEAFA+ + + G+DPEKVNVNGGAVALGHP+GA+GA
Sbjct: 297 INALLEKTGKTVEDIDLFEINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGA 356
Query: 400 RCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436
R + TL+ E+KRRG G+ ++C G G G A + E
Sbjct: 357 RIIVTLIHELKRRGGG--IGIAAICSGGGQGDAVLIE 391
|
Length = 393 |
| >gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Score = 279 bits (716), Expect = 4e-90
Identities = 156/418 (37%), Positives = 226/418 (54%), Gaps = 49/418 (11%)
Query: 50 DVVIVAAYRTAICKAKRGG-FKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
+ I A RT K K+ G + L A +L+A+ ++ L+ + V D+V+G V G
Sbjct: 3 EAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVG 62
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
A R A AG PETVP +NR C+SGL+AV A +++G D+ IA G+ESM
Sbjct: 63 DQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESM- 121
Query: 169 VNSISVVGQ--------VNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVES 220
S V ++P T +P GI+++ +A ++G +R++ D AVES
Sbjct: 122 ----SRVPMGSDGGAWAMDPSTNFPTY----FVPQGISADLIATKYGFSREDVDAYAVES 173
Query: 221 HRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
+RAAAA A G F ++PV K + T ++ D+ +RP TT+ LAKLKP+F
Sbjct: 174 QQRAAAAWAEGYFAKSVVPV--KDQNGLTILDH------DEHMRPGTTMESLAKLKPSFA 225
Query: 281 KDGTT---------------------TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVF 319
G AGN+S + DGA AVL+ GL
Sbjct: 226 MMGEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARI 285
Query: 320 RSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPE 379
+ + +G DP++M GP A A+ AGL +DDI+LFE+NEAFAS + ++ L + +
Sbjct: 286 VATATIGSDPTIMLTGPVPATRKALAKAGLTVDDIDLFELNEAFASVVLRFMQALDIPHD 345
Query: 380 KVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
KVNVNGGA+A+GHPLGATGA + T+L E++RRGK R +I++C+G GMG A + ER
Sbjct: 346 KVNVNGGAIAMGHPLGATGAMILGTVLDELERRGK--RTALITLCVGGGMGIATIIER 401
|
Length = 402 |
| >gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Score = 271 bits (695), Expect = 4e-87
Identities = 147/405 (36%), Positives = 228/405 (56%), Gaps = 31/405 (7%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTL----ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVL 105
DV IV RT I GGF +L A +L + ++A +E+ ++P+ V ++ G VL
Sbjct: 2 DVCIVGVARTPI-----GGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVL 56
Query: 106 APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLE 165
+ +A R AA AG P + TVN+ C+SG++AV A +I+ G+ D+ +A G+E
Sbjct: 57 SANLGQA-PARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGME 115
Query: 166 SMTVNSISVVGQVNPKVEI-FTQARDCLL-----------PMGITSENVAQRFGVTRQEQ 213
SM+ N+ + + + D +L MG+ +E A ++ ++R+EQ
Sbjct: 116 SMS-NAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQ 174
Query: 214 DLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA 273
D A++S+ RA AA +G F EI+PV P V + D+G+ A L
Sbjct: 175 DAYAIQSYERAIAAQEAGAFAWEIVPVEV----PGGRGRPSVIVDKDEGLG-KFDPAKLR 229
Query: 274 KLKPAFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM 332
KL+P+FK+D G+ TAGNAS +SDGA A++L+ A++ GL ++ R ++ P +
Sbjct: 230 KLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELF 289
Query: 333 GIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGH 392
PA+AIP A+K AGL+ ++ +EINEAF+ + K LGLDPEKVNV+GGAV+LGH
Sbjct: 290 TTAPALAIPKALKHAGLEASQVDYYEINEAFSVVALANQKLLGLDPEKVNVHGGAVSLGH 349
Query: 393 PLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
P+G +GAR + TLL ++ + ++GV +C G G +A V E
Sbjct: 350 PIGCSGARILVTLLGVLRSKNG--KYGVAGICNGGGGASAIVVEL 392
|
Length = 394 |
| >gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Score = 266 bits (682), Expect = 4e-85
Identities = 159/411 (38%), Positives = 220/411 (53%), Gaps = 37/411 (9%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPG 108
+ I A RT I + G ADDL A LKA++E+ ++ + + D++ G G
Sbjct: 3 EAFICDAIRTPIGRYG-GALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAG 61
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
RM+ AG P VP T+NR C SG+ AV A AIK+G + IA G+ESM+
Sbjct: 62 EDNRNVARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMS 121
Query: 169 VNSISVVGQ--------------------VNPKVEIFTQARDCLLPMGITSENVAQRFGV 208
+ V+G+ VNP + + + M T+ENVA + V
Sbjct: 122 -RAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLM----KQLYGVDSMPETAENVATDYNV 176
Query: 209 TRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTT 268
+R +QD A+ S ++AA A A G EI+PV + K G V+ D+ R TT
Sbjct: 177 SRADQDAFALRSQQKAARAQADGTLAQEIVPVT---IPQKKGDPLVVS--RDEHPRE-TT 230
Query: 269 IADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD 328
+ LAKLK + DGT TAGNAS V+DGA A+LL + A + GL + GV+
Sbjct: 231 LEALAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVE 290
Query: 329 PSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL--DPEKVNVNGG 386
P VMGIGPA A + G+ +D ++ E+NEAFASQ + +++LGL D +VN NGG
Sbjct: 291 PRVMGIGPAPATQKLLARLGMTLDQFDVIELNEAFASQGLAVLRELGLADDDARVNPNGG 350
Query: 387 AVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
A+ALGHPLGA+GAR V T L +++R G RF + +MCIG G G A ER
Sbjct: 351 AIALGHPLGASGARLVTTALYQLERTGG--RFALCTMCIGVGQGIAIAIER 399
|
Length = 400 |
| >gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 265 bits (679), Expect = 9e-85
Identities = 159/407 (39%), Positives = 225/407 (55%), Gaps = 29/407 (7%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
D I R+ + G DDL A V++ ++EK+ ++ D+++G G
Sbjct: 3 DAYIYDGLRSPFGR-HAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGE 61
Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
R A AG P TVP +TVNR C+SGL AV D A AI G D+ +A G+ESM+
Sbjct: 62 DSRNVARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSR 121
Query: 170 NSI-----------------SVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE 212
+ +G P +I Q + +P T +NVA FG++R++
Sbjct: 122 APFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGNDSMPE--TGDNVAAEFGISRED 179
Query: 213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL 272
D A +S + AA G F DEI P+ ++ + K V D+ RP++T+ L
Sbjct: 180 ADRFAAQSQAKYQAAKEEGFFADEITPI--EVPQGRKLPPKLVA--EDEHPRPSSTVEAL 235
Query: 273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM 332
KLKP F+ G TAGNAS ++DGA A+L+ R+ + GL + S +A GV+P +M
Sbjct: 236 TKLKPLFE-GGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIM 294
Query: 333 GIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL--DPEKVNVNGGAVAL 390
GIGP AI A+ AGL +DD+++ EINEAFASQ + C+K LG+ D +VN NGGA+A+
Sbjct: 295 GIGPVEAIKKALARAGLTLDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNGGAIAV 354
Query: 391 GHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
GHPLGA+GAR T E++RRGK R+ V+S+CIG G G A V ER
Sbjct: 355 GHPLGASGARLALTAARELQRRGK--RYAVVSLCIGVGQGLAMVIER 399
|
Length = 401 |
| >gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 263 bits (674), Expect = 3e-84
Identities = 153/395 (38%), Positives = 217/395 (54%), Gaps = 29/395 (7%)
Query: 53 IVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRA 112
IV A RT + K ++GG DL A VLK ++++T ++P+ V D++ G V G
Sbjct: 6 IVDAVRTPVGK-RKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAG 64
Query: 113 MECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSI 172
R + AG PE VP TV+RQC S QA+ A A+ +G D+ +A G+++M+ I
Sbjct: 65 NIARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPI 124
Query: 173 S---VVGQVNPKVEIFTQARDCLLPMG-------ITSENVAQRFGVTRQEQDLAAVESHR 222
S G+ F +++ L G +E +A+++G++R+E + A+ESHR
Sbjct: 125 SSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELIAEKWGISREEMERFALESHR 184
Query: 223 RAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD 282
RA AA +G+F +EI+PV GV VD+G R T++ +A LKP +
Sbjct: 185 RAFAAIRAGRFDNEIVPVG--------GVT------VDEGPR-ETSLEKMAGLKP-LVEG 228
Query: 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPA 342
G TA ASQ+SDGA AVLL + GL S G DP M P A
Sbjct: 229 GRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRY 288
Query: 343 AVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCV 402
A++ GL IDDI++ EINEAFA + +K+ G DP KVN NGGA+ALGHPLGATGA+ +
Sbjct: 289 ALEKTGLSIDDIDVVEINEAFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLM 348
Query: 403 ATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
TLL E++R G R+G+ +MC G G + ER
Sbjct: 349 TTLLHELERTGG--RYGLQTMCEGGGTANVTIIER 381
|
Length = 382 |
| >gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 258 bits (660), Expect = 5e-82
Identities = 147/403 (36%), Positives = 239/403 (59%), Gaps = 34/403 (8%)
Query: 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
V I A RTA + G T A L A ++K +++ ++++P+ V ++++G V+ GS
Sbjct: 5 VYITHAKRTAF-GSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSG 63
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV- 169
+ R +AG P+ VP T+N+ C SGL++VA A +I G +I IA G E+M++
Sbjct: 64 QN-PARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLG 122
Query: 170 ------------NSISVVG--QVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDL 215
I +V Q + ++F+ + MGIT+EN++++F ++RQEQD
Sbjct: 123 MHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSG-----VFMGITAENISKQFNISRQEQDE 177
Query: 216 AAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVT--ISVDDGIRPNTTIADLA 273
A+ SH++AA A +G FKDEI+P+ I K+ T D+ +RP+T++ L+
Sbjct: 178 FALSSHKKAAKAQLAGIFKDEILPIEVTI--------KKTTSLFDHDETVRPDTSLEILS 229
Query: 274 KLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMG 333
KL+PAF K+G TAGNAS ++DGA ++++ + L L S+++ GVDPS+MG
Sbjct: 230 KLRPAFDKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMG 289
Query: 334 IGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHP 393
P A A+ AG ++D+ + E+NEAFA+Q +Y +++ D EKVN+NGGA+A+GHP
Sbjct: 290 TAPVPASQKALSKAGWSVNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHP 349
Query: 394 LGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436
+GA+G R + TL+ ++R + G++++CIG GMG A E
Sbjct: 350 IGASGGRVLITLIHGLRR--AKAKKGLVTLCIGGGMGMAMCVE 390
|
Length = 392 |
| >gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 259 bits (663), Expect = 6e-82
Identities = 156/443 (35%), Positives = 228/443 (51%), Gaps = 74/443 (16%)
Query: 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVL--- 105
D + IV+ RT K F A DL V+ ++ ++ ++P + +V G V+
Sbjct: 5 DRIAIVSGLRTPFAKQ-ATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMP 63
Query: 106 -APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGL 164
AP R + G +V+R C++ QAVA+VA +I AG DIGIA G
Sbjct: 64 EAPNIAREI-----VLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGA 118
Query: 165 ESMTVNSISV----------------VGQVNPKVEIFTQ--ARDCLLP------------ 194
+S +V I V +GQ ++++F++ RD LLP
Sbjct: 119 DSSSVLPIGVSKKLARALVDLNKARTLGQ---RLKLFSRLRLRD-LLPVPPAVAEYSTGL 174
Query: 195 -MGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEK 253
MG T+E +A+ +G++R+EQD A SH+ AA A A GK DE V T V P
Sbjct: 175 RMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDE---VMTAHVPPY----- 226
Query: 254 RVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKG 312
+ + D+ IR ++T+ D AKL+PAF +K GT TA N++ ++DGA AVLLM S A G
Sbjct: 227 KQPLEEDNNIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALG 286
Query: 313 LPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCI 371
L LG RS++ +D M +GPA A P A++ AGL + D+ L +++EAFA+Q + +
Sbjct: 287 LTPLGYLRSYAFAAIDVWQDMLLGPAYATPLALERAGLTLADLTLIDMHEAFAAQTLANL 346
Query: 372 K----------KLG-------LDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGK 414
+ KLG +D K NV GG++A GHP ATGAR + L E++RRG
Sbjct: 347 QMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGG 406
Query: 415 DCRFGVISMCIGSGMGAAAVFER 437
G+ + C G+GAA V E
Sbjct: 407 G--LGLTTACAAGGLGAAMVLEV 427
|
Length = 428 |
| >gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 254 bits (650), Expect = 1e-80
Identities = 147/390 (37%), Positives = 209/390 (53%), Gaps = 12/390 (3%)
Query: 52 VIVAAYRTAICKAKRGGFKDTL-ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
VIV A RT I KR G+ L A +LL V +AV+++ ++P +V ++ G V G
Sbjct: 5 VIVEAVRTPI--GKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQ 62
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
R A +AG P V T++ QC S QA VA I AG D+GIA G+E+M+
Sbjct: 63 SNNITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMS-- 120
Query: 171 SISVVGQVNPKV-EIFTQARDCLLPMGITS-ENVAQRFGVTRQEQDLAAVESHRRAAAAT 228
+ + P + D +P + E +A+R G+TR++ D + S RRAA A
Sbjct: 121 RVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAKRRGITREDVDAFGLRSQRRAAQAW 180
Query: 229 ASGKFKDEIIPVNTKIVDP-KTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTA 287
A G+F EI PV ++D + ++ D G+R +TT+ LA LKP + G TA
Sbjct: 181 AEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLR-DTTMEGLAGLKPVLE-GGIHTA 238
Query: 288 GNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSA 347
G +SQ+SDGA AVL M A GL + + VG +P GP A ++ A
Sbjct: 239 GTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQATAKVLEKA 298
Query: 348 GLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLS 407
G++I DI+L EINEAFAS + + D +KVNVNGGA+ALGHP+G+TGAR + T L
Sbjct: 299 GMKIGDIDLVEINEAFASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALH 358
Query: 408 EMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
E++R K +I+MC G + + ER
Sbjct: 359 ELERTDK--STALITMCAGGALSTGTIIER 386
|
Length = 387 |
| >gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 253 bits (649), Expect = 2e-80
Identities = 152/410 (37%), Positives = 231/410 (56%), Gaps = 51/410 (12%)
Query: 53 IVAAYRTAICKAKRGGFKDTLAD----DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
IVAA RTA ++GG LA DL A VL A+++++ +P+ + D+++G V G
Sbjct: 6 IVAAARTA--GGRKGG---RLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVG 60
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
R A + PE+VP +++RQC S QA+ A A+ +G DI IAAG+ESMT
Sbjct: 61 EQATNVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMT 120
Query: 169 VNSISVVGQV----------NPKVE------IFTQARDCLLPMGITSENVAQRFGVTRQE 212
+ + +P +E F+Q G +E +A+++G+++ +
Sbjct: 121 RVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQF------TG--AEMMAKKYGLSKDQ 172
Query: 213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL 272
D A++SH+RA AAT +GKFK EI+P+ D + VD+GIR + T+ +
Sbjct: 173 LDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHT-----VDEGIRFDATLEGI 227
Query: 273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGV-----FRSFSAVGV 327
A +K + G TA ASQ+ DGA V+++ ++GL LGV + +G
Sbjct: 228 AGVKL-IAEGGRLTAATASQICDGASGVMVVN-----ERGLKALGVKPLARIHHMTVIGG 281
Query: 328 DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGA 387
DP +M P A A+K AG++IDDI+L+E+NEAFAS + +K G DPE++NVNGGA
Sbjct: 282 DPVIMLEAPLPATERALKKAGMKIDDIDLYEVNEAFASVPLAWLKATGADPERLNVNGGA 341
Query: 388 VALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
+ALGHPLGA+G + + TL+ +K+RGK R+G+ +MC G GM + ER
Sbjct: 342 IALGHPLGASGTKLMTTLVHALKQRGK--RYGLQTMCEGGGMANVTIVER 389
|
Length = 390 |
| >gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 247 bits (632), Expect = 4e-78
Identities = 143/387 (36%), Positives = 213/387 (55%), Gaps = 34/387 (8%)
Query: 52 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR 111
VIV A RT I K K G KD L AP+L + ++ E+ D+++G V+ PG
Sbjct: 4 VIVEAKRTPIGK-KNGMLKDYEVQQLAAPLLTFL---SKGMEREIDDVILGNVVGPGGNV 59
Query: 112 AMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNS 171
A R++A AG +P T++RQC +GL+A+ I+ G IA G+ES + +
Sbjct: 60 A---RLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSP 116
Query: 172 ISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231
+ +P+ I MG+ +E VA+R+ +TR+ QD A S++R A G
Sbjct: 117 FQNRARFSPET-IGDPD------MGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKG 169
Query: 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL-AKLKPAFKKDGTTTAGNA 290
+EI+ N G+ D+ I+ + + KPAF +GT TAGN+
Sbjct: 170 YIHEEILSFN--------GLL-------DESIKKEMNYERIIKRTKPAFLHNGTVTAGNS 214
Query: 291 SQVSDGAGAVLLMKRSLAVQKGL-PILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGL 349
V+DGA AVL+M+ A + G P+L RS + VGVDP++ G GP A+ + +
Sbjct: 215 CGVNDGACAVLVMEEGQARKLGYKPVLRFVRS-AVVGVDPNLPGTGPIFAVNKLLNEMNM 273
Query: 350 QIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEM 409
+++DI+ FEINEAFAS+ V C K+L + EK+NVNGGA+ALGHP GA+GA V L +
Sbjct: 274 KVEDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQA 333
Query: 410 KRRGKDCRFGVISMCIGSGMGAAAVFE 436
KR D ++G+ ++ IG G+G A +FE
Sbjct: 334 KRE--DMKYGIATLGIGGGIGLALLFE 358
|
Length = 361 |
| >gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 248 bits (635), Expect = 8e-78
Identities = 159/441 (36%), Positives = 228/441 (51%), Gaps = 70/441 (15%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
V IV RT KA RGG A DL +A++ + P ++ ++++G P
Sbjct: 4 PVYIVDGARTPFLKA-RGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCA-MPSP 61
Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT- 168
A R+ A G E VP TV R C+SG+QA+ A I G D+ +A G+E+M+
Sbjct: 62 DEANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSH 121
Query: 169 ---------------VNSISVVGQVNPKVEIFTQARD-----------------CLLPMG 196
+ +GQ K+ + R L MG
Sbjct: 122 APLLFSEKMVRWLAGWYAAKSIGQ---KLAALGKLRPSYLAPVIGLLRGLTDPVVGLNMG 178
Query: 197 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVT 256
T+E +A RFG+TR++ D A SH+R AAA A G+ K E++P + D
Sbjct: 179 QTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVP----LFDRDGKFYDH-- 231
Query: 257 ISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQK-GLP 314
DDG+RP++++ LAKLKP F + G TAGN+SQ++DGA LL+ AV+K GLP
Sbjct: 232 ---DDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGA-CWLLLASEEAVKKYGLP 287
Query: 315 ILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYV------ 368
LG +DPS MG+GP A ++ GL ++D++L+EINEAFA+Q +
Sbjct: 288 PLGRIVDSQWAALDPSQMGLGPVHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLAAW 347
Query: 369 ----YCIKKLGL-------DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCR 417
YC ++LGL D E++NV+GGA+ALGHP+GA+GAR V LL +KRRG +
Sbjct: 348 ADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLLHALKRRGT--K 405
Query: 418 FGVISMCIGSGMGAAAVFERG 438
G+ ++CIG G G A + ER
Sbjct: 406 RGIAAICIGGGQGGAMLLERV 426
|
Length = 426 |
| >gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 227 bits (579), Expect = 6e-70
Identities = 151/401 (37%), Positives = 206/401 (51%), Gaps = 25/401 (6%)
Query: 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
D +VI +A RT + A +G F A L A + A +E+ L P ++ ++V+G VL G
Sbjct: 7 DPIVIASAARTPMA-AFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAG 65
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
+A R AA AG P +V TVN+ C SG++A + AG D+ +A G+ESMT
Sbjct: 66 QGQA-PARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMT 124
Query: 169 VNSISVV-----------GQVNPKVEI--FTQARDCLLPMGITSENVAQRFGVTRQEQDL 215
N+ ++ GQV + + A D MG +E A +G TR+ QD
Sbjct: 125 -NAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEYGFTREAQDA 183
Query: 216 AAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKL 275
A+ES RA A G F EI PV V K G I D+ + L
Sbjct: 184 FAIESLARAKRANEDGSFAWEIAPVT---VAGKKG---DTVIDRDEQPF-KANPEKIPTL 236
Query: 276 KPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIG 335
KPAF K GT TA N+S +SDGA A+++M+ S A + GL L S PS
Sbjct: 237 KPAFSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTA 296
Query: 336 PAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLG 395
P AI + G + +++LFEINEAFA + +K+ GL EKVNVNGGA ALGHP+G
Sbjct: 297 PVGAIRKLFEKNGWRAAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALGHPIG 356
Query: 396 ATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436
A+GAR + TL+ ++ RG + GV S+CIG G A E
Sbjct: 357 ASGARILVTLIGALRARGG--KRGVASLCIGGGEATAMGIE 395
|
Length = 397 |
| >gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 223 bits (570), Expect = 3e-68
Identities = 143/424 (33%), Positives = 203/424 (47%), Gaps = 46/424 (10%)
Query: 50 DVVIVAAYRT--AICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAP 107
+ I+ A RT I K +G L A VLKA+ E+ LN ++V DI+ T
Sbjct: 3 EAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQR 62
Query: 108 GSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167
G RMAA AG+ T++R C G+ +V A I +G+ D+ IA G E M
Sbjct: 63 GKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMM 122
Query: 168 TVNSISVVGQVNPKVEIFT--------QARDCLLPMGITSENVAQRFGVTRQEQDLAAVE 219
+ + + +A G+ + +A G+TR+ D +E
Sbjct: 123 SYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVCGDAIATMEGITREALDALGLE 182
Query: 220 SHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF 279
S RRAA A G+F ++PV + V + ++ RP TT LA LKPAF
Sbjct: 183 SQRRAARAIKEGRFDKSLVPV----YRD----DGSVALDHEEFPRPQTTAEGLAALKPAF 234
Query: 280 KK-------DGTTT-------------------AGNASQVSDGAGAVLLMKRSLAVQKGL 313
D TT AGN+S V DGA A+LL ++ A + GL
Sbjct: 235 TAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGL 294
Query: 314 PILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKK 373
+ + +G DP++M P A + AGL DDI+L+EINEAFA I+
Sbjct: 295 KPRARIVAMANMGDDPTLMLNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFIRD 354
Query: 374 LGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAA 433
L LD +KVNVNGGA+ALGHP+GATG+ + T+L E++RRG + G+++MC GM A
Sbjct: 355 LDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERRGL--KRGLVTMCAAGGMAPAI 412
Query: 434 VFER 437
+ ER
Sbjct: 413 IIER 416
|
Length = 417 |
| >gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 214 bits (546), Expect = 3e-65
Identities = 137/402 (34%), Positives = 212/402 (52%), Gaps = 34/402 (8%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
DV IV+A RTAI K R F A L +KAVI+ +L+P+ V ++++G V+ G
Sbjct: 3 DVYIVSAKRTAIGKFGRS-FSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV 61
Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
+ AA++AG P V TVN C+SG+ AV A I G D+ IA G+E+M+
Sbjct: 62 GQN-PAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSN 120
Query: 170 NSISVVGQV--NPKVEIFTQAR--DCLLP-----------MGITSENVAQRFGVTRQEQD 214
+ + PK + + D +L MG+++E A+++G+TR+ D
Sbjct: 121 APFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGITREMAD 180
Query: 215 LAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAK 274
+V+S+ RA AT SG+F++EI+P N + D+GIR TT+ DLAK
Sbjct: 181 EYSVQSYERAIRATESGEFRNEIVPFND--------------LDRDEGIR-KTTMEDLAK 225
Query: 275 LKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGI 334
L PAF K+G TAGN++Q+SDG A+++ + GL + + + +DP
Sbjct: 226 LPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVE 285
Query: 335 GPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPL 394
P A ++ ID +L E NEAF+ + +L +D E+ NVNGGAVA+GHP+
Sbjct: 286 APIPATRKLLEKQNKSIDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAVAIGHPI 345
Query: 395 GATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436
G +G+R + TL++ +K R + G+ ++C G G E
Sbjct: 346 GNSGSRIIVTLINALKTR--HMKTGLATLCHGGGGAHTLTLE 385
|
Length = 388 |
| >gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 1e-63
Identities = 139/443 (31%), Positives = 206/443 (46%), Gaps = 78/443 (17%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
V I+ R ++ G + D D+L L ++++ L +G++V G VL
Sbjct: 8 RVAILGGNRIPFARSN-GAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSR 66
Query: 110 ----TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLE 165
TR EC + + + P T P + + C +GL+A VA I G D GIA G++
Sbjct: 67 DFNLTR--ECVLGSALS--PYT-PAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVD 121
Query: 166 SM-----------------------TVNSISVVGQVNPKVEIFTQARD----CLLPMGIT 198
+ T + + +G++ PK R+ L MG
Sbjct: 122 TTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRTGLSMGEH 181
Query: 199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTIS 258
+ A+ +G++R+ QD A SH+ AAA G F D I P G+ +
Sbjct: 182 AAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFL--------GLTR----- 228
Query: 259 VDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPIL 316
D+ +RP++++ LAKLKP F K T TAGN++ ++DGA VLL A + GLP+L
Sbjct: 229 -DNNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVL 287
Query: 317 GVFRSFSAVGVDPSVMG-----IGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYV--- 368
VD V G + PA A+P + GL + D + +EI+EAFASQ +
Sbjct: 288 AYLVDAETAAVD-FVHGKEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHEAFASQVLATL 346
Query: 369 -------YCIKKLGL-------DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGK 414
YC ++LGL D K+NVNG ++A GHP ATG R VATL + +G
Sbjct: 347 KAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAEKGS 406
Query: 415 DCRFGVISMCIGSGMGAAAVFER 437
R G+IS+C G G A+ ER
Sbjct: 407 G-R-GLISICAAGGQGVTAILER 427
|
Length = 427 |
| >gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Score = 204 bits (520), Expect = 7e-61
Identities = 140/439 (31%), Positives = 220/439 (50%), Gaps = 68/439 (15%)
Query: 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVL--- 105
+ + IVA RT + + F A DL V+ ++ ++ ++P + +V G V+
Sbjct: 7 ERIAIVAGLRTPFAR-QATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMP 65
Query: 106 -APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGL 164
AP R + G +V R C++ Q+ +VA +I AG DIGIA G
Sbjct: 66 EAPNIAREI-----VLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGA 120
Query: 165 ESMTVNSISVVGQV-------------NPKVEIFTQ--ARDCL------------LPMGI 197
+S +V I V ++ K+++F++ +D + L MG
Sbjct: 121 DSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYSTGLSMGQ 180
Query: 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTI 257
T+E +A+ +G+TR EQD A SH A+ A GK E++ T P + I
Sbjct: 181 TAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVM---TAFPPP-----YKQWI 232
Query: 258 SVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPIL 316
+ D+ IR N+T+A AKL+PAF +K G+ TA N++ ++DGA AV+LM+ A + G+ L
Sbjct: 233 AEDNNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPL 292
Query: 317 GVFRS--FSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKL 374
G RS F+A+ V M +GP+ A P A++ AGL + D+ L +++EAFA+Q + ++
Sbjct: 293 GYIRSYAFTAIDVW-QDMLMGPSYATPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMF 351
Query: 375 G-----------------LDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCR 417
+D K NV GG++A GHP ATGAR + L E+KRRG
Sbjct: 352 ASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLRELKRRGGG-- 409
Query: 418 FGVISMCIGSGMGAAAVFE 436
G+ + C G+GAA + E
Sbjct: 410 LGLNTACAAGGLGAAMILE 428
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 430 |
| >gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain | Back alignment and domain information |
|---|
Score = 193 bits (493), Expect = 1e-60
Identities = 77/125 (61%), Positives = 98/125 (78%), Gaps = 2/125 (1%)
Query: 313 LPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIK 372
L L RS++ VGVDP++MGIGPA AIP A+K AGL ++DI+LFEINEAFA+Q + K
Sbjct: 1 LKPLARIRSYATVGVDPAIMGIGPAYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVAK 60
Query: 373 KLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAA 432
LG+DPEKVNVNGGA+ALGHPLGA+GAR + TLL E+KRRG ++G+ ++CIG G G A
Sbjct: 61 DLGIDPEKVNVNGGAIALGHPLGASGARILVTLLHELKRRGG--KYGLATLCIGGGQGVA 118
Query: 433 AVFER 437
+ ER
Sbjct: 119 MIIER 123
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 123 |
| >gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 183 bits (466), Expect = 2e-53
Identities = 119/419 (28%), Positives = 176/419 (42%), Gaps = 63/419 (15%)
Query: 54 VAAYRTAICK--AKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR 111
A TA K + G + LA + A + A +E + V + +G VL
Sbjct: 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVL-GAGEG 59
Query: 112 AMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNS 171
+ AA +AG + P +N C SGL+A+A I G + +A G E M ++
Sbjct: 60 QNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSA 119
Query: 172 ISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231
+ + + V I R D A+ A AA G
Sbjct: 120 ENNAKEKHIDVLINKYG--------------------MRACPDAFALAGQAGAEAAEKDG 159
Query: 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIR--PNTTIADLAKLKPAFKKDGTTTAGN 289
+FKDE K G + + D+ I+ ++ ++AKL+PAF K+ TAGN
Sbjct: 160 RFKDEFAKFGVK------GRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGN 213
Query: 290 ASQVSDGAGAVLLMKRSLAVQKGLPI-------LGVFRSFSAVGVDPS----VMGIGPAV 338
A ++DGA A +LM + A + GL L + ++ D V G GP
Sbjct: 214 ACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIE 273
Query: 339 AIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEK------------------ 380
A A++ AGL I D++L E ++AFA+ + LGL PE
Sbjct: 274 AARKALEKAGLGIGDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSI 333
Query: 381 VNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDC---RFGVISMCIGSGMGAAAVFE 436
+N NGGA+A+GHP+GA+GA A L E+K G+ +CIG G GAA E
Sbjct: 334 INPNGGAIAIGHPIGASGAAICAELCFELKGEAGKRQGAGAGLALLCIGGGGGAAMCIE 392
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 393 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 80.6 bits (199), Expect = 4e-17
Identities = 42/160 (26%), Positives = 60/160 (37%), Gaps = 12/160 (7%)
Query: 287 AGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS----VMGIGPAVAIPA 342
DGA A ++ A+++G S +A S V G G A A
Sbjct: 94 GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARK 153
Query: 343 AVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVN---VNGGAVALGHPLGATGA 399
A++ AGL DI+ E + LGLDP+ V V+ + GHPLGA G
Sbjct: 154 ALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGL 213
Query: 400 RCVATLLSEMKRRGKDC-----RFGVISMCIGSGMGAAAV 434
+ LL ++ R ++ G AA V
Sbjct: 214 AILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVV 253
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 75.4 bits (186), Expect = 7e-15
Identities = 94/402 (23%), Positives = 145/402 (36%), Gaps = 88/402 (21%)
Query: 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNR 135
+L A +A ++ L P+++ +VVG G ++ + A Y G R V
Sbjct: 18 ELAAEAARAALDDAGLEPADIDAVVVGNAAG-GRFQSFPGALIAEYLGLLGKPATR-VEA 75
Query: 136 QCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV--NSISVVGQVNPKVEIFTQARDCLL 193
+SG AV A AI +GL D+ + G E M+ G+ + + L
Sbjct: 76 AGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLT 135
Query: 194 PMGITSENVAQR----FGVTRQEQDLAAV-ESHRRAAAATASGKFKDEIIPV----NTKI 244
P + + A+R +G TR +DLA V + R AA +F+ I + I
Sbjct: 136 PPALYA-LAARRYMHRYGTTR--EDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMI 192
Query: 245 VDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMK 304
DP + VSDGA AV+L
Sbjct: 193 ADP-------------------------------------LRLLDCCPVSDGAAAVVLAS 215
Query: 305 RSLAVQKGLP---ILGV-----FRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINL 356
A + ILGV S S S+ +A A K AG+ DDI++
Sbjct: 216 EERARELTDRPVWILGVGAASDTPSLSERDDFLSLDAA--RLAARRAYKMAGITPDDIDV 273
Query: 357 FEINEAFASQYVYCIKKLGLDPE------------------KVNVNGGAVALGHPLGATG 398
E+ + F + ++ LG + VN +GG ++ GHPLGATG
Sbjct: 274 AELYDCFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATG 333
Query: 399 ARCVATLLSEMKRRG-----KDCRFGVISMCIGSGMGAAAVF 435
+ +++ R G+ G G+AAV
Sbjct: 334 LAQAVEAVRQLRGEAGARQVPGARVGLAHN--IGGTGSAAVV 373
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 7e-11
Identities = 97/428 (22%), Positives = 157/428 (36%), Gaps = 92/428 (21%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG- 108
DV I+ +T K G D DL +E ++ ++ + VG + A
Sbjct: 3 DVAIIGVGQT-----KFGELWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLF 57
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
++ + A YAG +P V C+SG A+ A+ +G D+ +AAG+E MT
Sbjct: 58 VSQEHIAALIADYAGLAP-IPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMT 116
Query: 169 VNSISVVGQVNPKVEIFTQARDCL--LPMGITSENVA--------QRFGVTRQEQDLAAV 218
E +A D G T + ++G T ++ L AV
Sbjct: 117 DVPTPDA------TEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGTTEEDLALVAV 170
Query: 219 ESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278
++H + +P +K +T V+ + + +AD KL
Sbjct: 171 KNHYNGS-------------------KNPYAQFQKEIT--VEQVLN-SPPVADPLKLL-- 206
Query: 279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-------PSV 331
+ S ++DGA AV+L S K V+ S D
Sbjct: 207 ----------DCSPITDGAAAVILA--SEEKAKEYTDTPVWIKASGQASDTIALHDRKDF 254
Query: 332 MGIGPAV-AIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEK---------- 380
+ AV A A K AG++ DI++ E+++ F + + LG +K
Sbjct: 255 TTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTIAEILAYEDLGF-AKKGEGGKLAREG 313
Query: 381 ---------VNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIG----- 426
VN +GG A GHP+GATG ++ +++ + R VI G
Sbjct: 314 QTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGRQQVIGAGYGLTHNV 373
Query: 427 SGMGAAAV 434
G G AV
Sbjct: 374 GGTGHTAV 381
|
Length = 389 |
| >gnl|CDD|183606 PRK12578, PRK12578, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 3e-10
Identities = 85/376 (22%), Positives = 152/376 (40%), Gaps = 88/376 (23%)
Query: 64 AKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMA---AF 120
+K G D +L +K + ++ +++ +VVG+ + R +E A A
Sbjct: 11 SKFGRRDDVSVQELAWESIKEALNDAGVSQTDIELVVVGST----AYRGIELYPAPIVAE 66
Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM----TVNSISVVG 176
Y+G VPLR V C++GL A TA+ +GL D+ IA G++ M T S+++ G
Sbjct: 67 YSGLTGKVPLR-VEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGG 125
Query: 177 QVNPKVEIFTQARDCLLPMGIT---------SENVAQRFGVTRQEQDLAAVESHRRAAAA 227
+ + G T + ++A +G T ++ L +V++H+ A
Sbjct: 126 RGGNYQWEYHF-------YGTTFPTYYALYATRHMA-VYGTTEEQMALVSVKAHKYGA-- 175
Query: 228 TASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTA 287
++PK +K VT V++ ++ + I+ KL
Sbjct: 176 -----------------MNPKAHFQKPVT--VEEVLK-SRAISWPIKLL----------- 204
Query: 288 GNASQVSDGAGAVLLMK----RSLAVQKGLPILGVFRS--FSAVGVDPSVMGIGPAV-AI 340
++ +SDG+ + + L + + I G+ + ++ V +G A
Sbjct: 205 -DSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAA 263
Query: 341 PAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL-------------DPEK-----VN 382
A A + +DI + +++AF + + LG EK VN
Sbjct: 264 RQAYNMAKVTPNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVN 323
Query: 383 VNGGAVALGHPLGATG 398
+ GG A GHPLGATG
Sbjct: 324 LFGGLKAKGHPLGATG 339
|
Length = 385 |
| >gnl|CDD|240424 PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 5e-08
Identities = 82/390 (21%), Positives = 142/390 (36%), Gaps = 89/390 (22%)
Query: 75 DDLLAPVLKAVIEKTRLNPSE--VGDIVVGTVLAP--------GSTRAMECRMAAFYAGF 124
++LLA ++ +E T L+ V +VVG L G +
Sbjct: 49 EELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNAL 108
Query: 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEI 184
+R V C+SG AV A+ AG DI + G+E T S V G +
Sbjct: 109 LYKPAMR-VEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAAD 167
Query: 185 FTQARD-------CLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEI 237
+ + R CL A+R ++ ++ R AA A A+G K+ +
Sbjct: 168 YRRQRKLDDFTFPCLF---------AKRMKYIQEHGHFTMEDTARVAAKAYANGN-KNPL 217
Query: 238 IPVNTKIVDPKTGVEKRVTISVDDGIRP----NTTIADLAKLKPAFKKDGTTTAGNASQV 293
++T+ + + + P N T ++ + SQV
Sbjct: 218 AHMHTRKLSLEF-------CTGASDKNPKFLGNETYKPFLRMT------------DCSQV 258
Query: 294 SDGAGAVLLMKRSLAVQKGLPILGVFRSFSA-VGVDPSVMGIG--------------PAV 338
SDG ++L A ++GL +G+ + S V + G
Sbjct: 259 SDGGAGLVL-----ASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTSRA 313
Query: 339 AIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL-DPEK----------------- 380
A A+ AG++ D+ + E+++ F + + LG+ +
Sbjct: 314 AAQKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIP 373
Query: 381 VNVNGGAVALGHPLGATGARCVATLLSEMK 410
VN GG ++ GHP+GATG + + + +MK
Sbjct: 374 VNTGGGLLSFGHPVGATGVKQIMEVYRQMK 403
|
Length = 438 |
| >gnl|CDD|235771 PRK06289, PRK06289, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 48/179 (26%), Positives = 72/179 (40%), Gaps = 47/179 (26%)
Query: 265 PNTTIADLAKLKPAFKKDGTT---TAG-----NASQVSDGAGAVLLM----------KRS 306
PN A A D T G + SQV+DG V+L R
Sbjct: 186 PNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARP 245
Query: 307 LAVQKG----LPILGVFRSFSAVGVDPSVMGIGPAV--AIPAAVKSAGLQIDDINLFEIN 360
+ KG LG+ + DP V+ P V A+ A + AG+ +DD++ FE++
Sbjct: 246 IPRIKGWGHRTAPLGLEQKLDRSAGDPYVL---PHVRQAVLDAYRRAGVGLDDLDGFEVH 302
Query: 361 EAF-ASQYVYCIKKLGLDPE------------------KVNVNGGAVALGHPLGATGAR 400
+ F S+Y+ I +GL +N +GG + GHP+GA+G R
Sbjct: 303 DCFTPSEYL-AIDHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVR 360
|
Length = 403 |
| >gnl|CDD|181013 PRK07516, PRK07516, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 4e-05
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 28/133 (21%)
Query: 291 SQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-------VDPSVMGIGPAVAIPAA 343
S VSDGA A++L A + FR+ + V DP GP A A
Sbjct: 213 SLVSDGAAALVLADAETARALQRAV--RFRARAHVNDFLPLSRRDPLAFE-GPRRAWQRA 269
Query: 344 VKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPE------------------KVNVNG 385
+ AG+ +DD++ E ++ F + + +GL P VN +G
Sbjct: 270 LAQAGVTLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSG 329
Query: 386 GAVALGHPLGATG 398
G A GHP+GATG
Sbjct: 330 GLKAKGHPIGATG 342
|
Length = 389 |
| >gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 5e-05
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 20/121 (16%)
Query: 294 SDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAG 348
+GAGA++L + A+ +G I + P+ G G A+ AA+ AG
Sbjct: 231 GEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAG 290
Query: 349 LQIDDIN----------LFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATG 398
L +DI+ + E+ A + V G + + V+ GH LGA G
Sbjct: 291 LTPEDIDYINAHGTSTPANDKAESLAIKRV-----FGEHAKSLPVSSTKSLTGHTLGAAG 345
Query: 399 A 399
A
Sbjct: 346 A 346
|
Length = 412 |
| >gnl|CDD|181327 PRK08256, PRK08256, lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 8e-05
Identities = 73/319 (22%), Positives = 120/319 (37%), Gaps = 84/319 (26%)
Query: 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPK-VEIFT 186
+P+ VN CS+G A+ A+++G D +A G E M ++ V P +E F
Sbjct: 71 IPIVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFD 130
Query: 187 QARDCL-----LPM-----GITSENVAQRFGVTRQEQDLAAV-ESHRRAAAATASGKFKD 235
+A L P G +++G T E A + RR AA +F+D
Sbjct: 131 KALAELQGFDPAPPALRMFGGAGREHMEKYG-TTAET-FAKIGVKARRHAANNPYAQFRD 188
Query: 236 EIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSD 295
E +++D + L +L+ +
Sbjct: 189 EY--------------------TLEDVLASPMIWGPLTRLQ-------------CCPPTC 215
Query: 296 GAGAVLLMKRSLAVQKGLP----ILG---------VFRSFSAVGVDPSVMGIGPAVAIPA 342
GA A ++ A + GL I+ F S ++G A
Sbjct: 216 GAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSM----IDLVGYDMTRAAAQ 271
Query: 343 AV-KSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPE----------------KVNVN- 384
V + AG+ +DI++ E+++ F++ + + LGL PE + VN
Sbjct: 272 QVYEQAGIGPEDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNP 331
Query: 385 -GGAVALGHPLGATG-ARC 401
GG ++ GHPLGATG A+C
Sbjct: 332 SGGLLSKGHPLGATGLAQC 350
|
Length = 391 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 1e-04
Identities = 41/131 (31%), Positives = 57/131 (43%), Gaps = 23/131 (17%)
Query: 294 SDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAG 348
+GAG ++L A +G I + A P G G A A+ AA+ AG
Sbjct: 230 GEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAG 289
Query: 349 L---QIDDIN-------LFEINEAFASQYVYCIKKLGLD-PEKVNVNGGAVALGHPLGAT 397
L ID IN L + E+ A IK++ + +KV V+ GH LGA
Sbjct: 290 LSPEDIDYINAHGTSTPLNDAAESKA------IKRVFGEHAKKVPVSSTKSMTGHLLGAA 343
Query: 398 GA-RCVATLLS 407
GA +ATLL+
Sbjct: 344 GAVEAIATLLA 354
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Query: 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR 131
A +L + I L+ + ++VGT G + A++ G P
Sbjct: 5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQ-LAYHLGISG-GPAY 62
Query: 132 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLES 166
+VN+ C++GL A+A ++ G DI +A G E
Sbjct: 63 SVNQACATGLTALALAVQQVQNGKADIVLAGGSEE 97
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.003
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 23/98 (23%)
Query: 347 AGLQIDDINLF-------EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGA 399
AGL DDI+ F I EA A K+LGL EKV VN G T A
Sbjct: 236 AGLTPDDIDWFVPHQANLRIIEAVA-------KRLGLPEEKVVVNLDRY------GNTSA 282
Query: 400 RCVATLLSEMKRRGKDCRFGVISMC-IGSGM--GAAAV 434
+ L E GK + ++ + G+G+ GAA +
Sbjct: 283 ASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. Length = 320 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 461 | |||
| KOG1389 | 435 | consensus 3-oxoacyl CoA thiolase [Lipid transport | 100.0 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 100.0 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 100.0 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 100.0 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 100.0 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 100.0 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 100.0 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 100.0 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 100.0 | |
| KOG1391 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 100.0 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 100.0 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 100.0 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 100.0 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 100.0 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 100.0 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 100.0 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 100.0 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 100.0 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 100.0 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 100.0 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 100.0 | |
| PRK06158 | 384 | thiolase; Provisional | 100.0 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 100.0 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 100.0 | |
| KOG1392 | 465 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 100.0 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 100.0 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 100.0 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| KOG1406 | 408 | consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 | 100.0 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.97 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 99.96 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 99.96 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.96 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.96 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 99.95 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.95 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 99.95 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.94 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.94 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 99.94 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 99.93 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 99.93 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 99.93 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 99.93 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 99.93 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 99.93 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.92 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 99.92 | |
| KOG1394 | 440 | consensus 3-oxoacyl-(acyl-carrier-protein) synthas | 99.91 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 99.9 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.9 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.9 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.9 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.9 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 99.9 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 99.89 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.89 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 99.88 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.88 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.88 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.88 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.88 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.88 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.87 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.87 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.87 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.87 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 99.86 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.86 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.86 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.85 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 99.85 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.84 | |
| PRK06840 | 339 | hypothetical protein; Validated | 99.82 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 99.82 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 99.81 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.8 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 99.8 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 99.8 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 99.79 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 99.79 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 99.78 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 99.78 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 99.74 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 99.74 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.73 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 99.72 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 99.72 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 99.7 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.69 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 99.68 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 99.65 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 99.55 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 99.53 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 99.53 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 99.5 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 99.48 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 99.29 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 99.11 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 99.0 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 98.95 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 98.46 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 98.23 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 98.13 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 98.08 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 97.58 | |
| KOG1393 | 462 | consensus Hydroxymethylglutaryl-CoA synthase [Lipi | 95.6 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 95.07 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 94.49 | |
| PRK06158 | 384 | thiolase; Provisional | 92.15 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 91.8 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 91.27 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 91.08 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 90.41 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 89.93 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 89.84 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 89.37 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 89.36 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 89.24 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 89.21 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 88.92 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 88.8 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 88.79 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 88.53 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 88.37 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 88.22 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 88.18 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 88.07 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 88.06 | |
| PF02797 | 151 | Chal_sti_synt_C: Chalcone and stilbene synthases, | 87.59 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 87.48 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 87.18 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 87.16 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 86.52 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 86.38 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 86.35 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 85.61 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 85.39 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 85.22 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 84.21 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 83.9 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 83.54 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 83.48 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 82.84 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 82.74 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 82.33 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 82.25 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 82.21 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 82.01 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 81.84 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 81.53 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 81.19 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 80.4 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 80.39 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 80.26 | |
| COG1214 | 220 | Inactive homolog of metal-dependent proteases, put | 80.09 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 80.03 |
| >KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-90 Score=648.04 Aligned_cols=433 Identities=77% Similarity=1.189 Sum_probs=408.4
Q ss_pred HhHHHHHHHhccCCCCCCCCCchhhhhhhccccccccCCCCCCCCCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHH
Q 012522 4 ALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLK 83 (461)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~ 83 (461)
||+|+|.|+.||+|+++ ++.++.+.|++|.+..+ .+||+||++.|||++|.++|+|+++.+.||+..+.+
T Consensus 1 ~~er~~~ll~hl~~~s~----s~~~~a~~c~s~~~~~~------~~DVViVaa~RTaicka~rG~fkdt~pDeLl~~vl~ 70 (435)
T KOG1389|consen 1 AMERQQVLLRHLRPSSS----SASLSASACLSGDSAAS------AEDVVIVAALRTAICKAKRGGFKDTRPDELLAAVLR 70 (435)
T ss_pred CchHHHHHHHhcCCccc----ccccccccccccCcccc------ccCEEEEeeccchhhhcccCCcccCChHHHHHHHHH
Confidence 58999999999998663 57789999999999774 489999999999999999999999999999999999
Q ss_pred HHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEe
Q 012522 84 AVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAG 163 (461)
Q Consensus 84 ~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G 163 (461)
..+++.+++|+.|..|++|+++.++. +...+|+.+++.|+|.++|+.+||+.|+||++|+...+..|++|.+|+.|.+|
T Consensus 71 a~ie~t~~dp~~igdi~vG~vL~pg~-ga~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~G 149 (435)
T KOG1389|consen 71 AVIEKTNLDPSLIGDIVVGTVLAPGS-GASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAG 149 (435)
T ss_pred HHHhhcCCCHHHhcceeeeeccCCCc-chHHHHHHHHHcCCCcccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccc
Confidence 99999999999999999999999987 66778999999999999999999999999999999999999999999999999
Q ss_pred ecccccc-ccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccc
Q 012522 164 LESMTVN-SISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNT 242 (461)
Q Consensus 164 ~E~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~ 242 (461)
+|+|+.. |..+-..+.+.+...+.+.+|..|||+++|+++++||+|||+||++|+.||++|+++...|+|++||+|+.+
T Consensus 150 vESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~t 229 (435)
T KOG1389|consen 150 VESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKT 229 (435)
T ss_pred hhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHHHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeee
Confidence 9999984 222222345556666778999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEe
Q 012522 243 KIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSF 322 (461)
Q Consensus 243 ~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~ 322 (461)
+..||+ |.+|..+++.||++|+.+|++.|.++||+|.+||..|.+|+|+++|||+|++|+.+..|.++|+++++.+..+
T Consensus 230 kv~D~~-g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGttTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f 308 (435)
T KOG1389|consen 230 KVVDPK-GDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDF 308 (435)
T ss_pred eccCCc-CCccceeEecCCCCCCCcchhHHhhcchhhhcCCccccCchhhcccchhhhhhhhhhhHhhcCCceeEEeeee
Confidence 999988 7788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHH
Q 012522 323 SAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCV 402 (461)
Q Consensus 323 ~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~ 402 (461)
...+++|..|+.+|+.+|+++|+.+||..+|||+|||||+|+++.+++.+.|+|+++|||++||.+++|||+||||++++
T Consensus 309 ~~vGv~P~iMGiGPavAIp~alk~aGL~v~did~FEINEAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~V 388 (435)
T KOG1389|consen 309 AAVGVPPAIMGIGPAVAIPKALKAAGLEVDDIDLFEINEAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCV 388 (435)
T ss_pred eeecCCHHHcCCCchhhhHHHHHHcCCcccccceeehhHHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCCCEEEEEecccCcceeEEEEEEccchhhhhcCC
Q 012522 403 ATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFERGDCVDELCNAR 448 (461)
Q Consensus 403 ~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~~~~~~~~~~~~ 448 (461)
++++++|+++.++.++|++++|+|.|+|.|.+|++.+-++++++.+
T Consensus 389 aTlL~emKrrgkd~~~GVvSmCIGtGmGaAAvFer~~~~d~~~~~~ 434 (435)
T KOG1389|consen 389 ATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGGGVDELDNAR 434 (435)
T ss_pred HHHHHHHHhhccccccceEEEeecCCcchheeeecCCCCchhhhcc
Confidence 9999999999667789999999999999999999999999998876
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-81 Score=646.18 Aligned_cols=447 Identities=83% Similarity=1.239 Sum_probs=396.5
Q ss_pred ChHHhHHHHHHHhccCCCCCCCCCchhhhhhhccccccccCCCCCCCCCcEEEEeeeeccccccCCCCCCCCCHHHHHHH
Q 012522 1 MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAP 80 (461)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~ 80 (461)
||||..|++.|+.||+|+++ +.+. ++.+-|.+|.+.+|||-+...++|+|||++||||++.+.|.+++.++.||+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~V~IVG~grTpfgk~~~g~~~~~s~~eLa~e 77 (452)
T PLN02287 1 MEKAINRQRVLLRHLRPSSS--EPSS-LSASACAAGDSAAYHRTTAFGDDVVIVAAYRTPICKAKRGGFKDTYPDDLLAP 77 (452)
T ss_pred CchHHHHHHHHHhhccCCCC--Cccc-cccccccccchhhhccccCCCCCEEEEEeecCCCccCCCCCcCCCCHHHHHHH
Confidence 89999999999999998664 3333 67788999999999999999999999999999999844677889999999999
Q ss_pred HHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEE
Q 012522 81 VLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGI 160 (461)
Q Consensus 81 A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vL 160 (461)
|+++||+++||+++|||.|++|++.+...+.++.+++++..+|++...|+++|+++|+||+.++..|++.|++|.+|++|
T Consensus 78 A~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvL 157 (452)
T PLN02287 78 VLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGI 157 (452)
T ss_pred HHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeEE
Confidence 99999999999999999999999876655345677889999999766899999999999999999999999999999999
Q ss_pred EEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccc
Q 012522 161 AAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240 (461)
Q Consensus 161 v~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~ 240 (461)
|+|+|+||..|...+..+...+.......+...+|++++++|+++||+|||++|+|++++|+||.+||++|+|+.||+|+
T Consensus 158 v~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv 237 (452)
T PLN02287 158 GAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPV 237 (452)
T ss_pred EEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeee
Confidence 99999999876432221211111101001223469999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEE
Q 012522 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (461)
Q Consensus 241 ~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~ 320 (461)
.++..++++++++..+++.||.+|++++.|++.+++|+|+|+|++|.+|||+++|||+|+||++++.|++++.+|++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~ 317 (452)
T PLN02287 238 HTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFR 317 (452)
T ss_pred eccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEE
Confidence 87543333344444679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHH
Q 012522 321 SFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGAR 400 (461)
Q Consensus 321 g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~ 400 (461)
++.....+|..++.++..+++++|+++||+++|||++|+||+|++++++++|.|||++.|||++||++++|||+||||++
T Consensus 318 ~~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~daFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~ 397 (452)
T PLN02287 318 SFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGAR 397 (452)
T ss_pred EEeeccCCCccchHHHHHHHHHHHHHcCCCHHHCCEEEecchHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHHH
Confidence 98877677777777888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCC--CEEEEEecccCcceeEEEEEEccchhhhhcCCCCCc
Q 012522 401 CVATLLSEMKRRGKDC--RFGVISMCIGSGMGAAAVFERGDCVDELCNARMVPT 452 (461)
Q Consensus 401 ~~~~~~~~L~~~~~~~--~~gl~~~~~g~G~g~A~v~~~~~~~~~~~~~~~~~~ 452 (461)
+++++++||+++ ++ ++||+++|+|||+|.|+|||+.+.++|+.|+|.|..
T Consensus 398 ~v~~l~~qL~~~--~~~~~~gl~~~c~ggG~g~a~~ie~~~~~~~~~~~~~~~~ 449 (452)
T PLN02287 398 CVATLLHEMKRR--GKDCRFGVVSMCIGTGMGAAAVFERGDSVDELSNARKVEG 449 (452)
T ss_pred HHHHHHHHHHhc--CCCCCeeEEEEccccCceeEEEEEecCchhhhhhcccccC
Confidence 999999999988 77 999999999999999999999999999999998754
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-75 Score=591.48 Aligned_cols=375 Identities=40% Similarity=0.627 Sum_probs=341.3
Q ss_pred CcEEEEeeeecccccc-CCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 49 DDVVIVAAYRTAICKA-KRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~-~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
++||||++.||||+|. +.|+|++.++.||+.+|++++|+++||+|++||.|++|++.+...++.+.++.++..+|+|.+
T Consensus 2 ~~v~Iv~~~RTp~g~~~~~g~l~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~ 81 (402)
T PRK08242 2 TEAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPET 81 (402)
T ss_pred CcEEEEecccCCCccCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCC
Confidence 5899999999999983 579999999999999999999999999999999999999987654356789999999999877
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc-ccCCChhhhhhhc-c-cccCccHHHHHHHHHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-VGQVNPKVEIFTQ-A-RDCLLPMGITSENVAQ 204 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~g~~a~~~~~ 204 (461)
+|+++|+++|+||++||..|+++|++|.+|++|++|+|+||+.|+.. +..+ ..++. . +....+||+++|+|++
T Consensus 82 ~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~----~~~~~~~~~~~~~~mg~~Ae~~a~ 157 (402)
T PRK08242 82 VPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAW----AMDPSTNFPTYFVPQGISADLIAT 157 (402)
T ss_pred CCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCccc----ccCcccccccccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988522 1111 10111 1 1234579999999999
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC---
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--- 281 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--- 281 (461)
+||+|||+||+||++||+||.++++.|+|++||+|++. + +| +.++++||++|+++|+|+|.++||+|+|
T Consensus 158 ~~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~----~-~~---~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~ 229 (402)
T PRK08242 158 KYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKD----Q-NG---LTILDHDEHMRPGTTMESLAKLKPSFAMMGE 229 (402)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeec----C-CC---CEeeCCCCCCCCCCCHHHHhCCCCCccCccc
Confidence 99999999999999999999999999999999999972 1 12 2569999999999999999999999988
Q ss_pred -CC-----------------ccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHH
Q 012522 282 -DG-----------------TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAA 343 (461)
Q Consensus 282 -~g-----------------~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~a 343 (461)
+| ++|.+|+|+++|||+|+||++++.|++++++|+++|++++..+.+|..+..++..+++++
T Consensus 230 ~~g~~~~~~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~a 309 (402)
T PRK08242 230 MGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTIMLTGPVPATRKA 309 (402)
T ss_pred cCcccccccccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhcccHHHHHHHH
Confidence 44 589999999999999999999999999999999999999998888888888899999999
Q ss_pred HHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEe
Q 012522 344 VKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISM 423 (461)
Q Consensus 344 L~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~ 423 (461)
|+++|++++|||+||+||+|+.+.+.++|.||++++|+|++||++++|||+|+||+++++++++||+++ +.++||+++
T Consensus 310 l~~AGl~~~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~--~~~~g~~~~ 387 (402)
T PRK08242 310 LAKAGLTVDDIDLFELNEAFASVVLRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERR--GKRTALITL 387 (402)
T ss_pred HHHcCCCHHHCCEEEecchhhHHHHHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhc--CCCeEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 899999999
Q ss_pred cccCcceeEEEEEE
Q 012522 424 CIGSGMGAAAVFER 437 (461)
Q Consensus 424 ~~g~G~g~A~v~~~ 437 (461)
|+|||+|.|++||+
T Consensus 388 c~ggG~g~a~~~e~ 401 (402)
T PRK08242 388 CVGGGMGIATIIER 401 (402)
T ss_pred cccCCceeEEEEEe
Confidence 99999999999997
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-72 Score=576.31 Aligned_cols=382 Identities=43% Similarity=0.673 Sum_probs=341.9
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
|++|+|||++||||+| +.|.+++.++.+|+.+|+++||+++|++|+|||.|++|++.+...+..+.++.++..+|++.+
T Consensus 2 m~~v~Ivg~~rtp~g~-~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~ 80 (394)
T PRK09051 2 MREVVVVSGVRTAIGT-FGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQE 80 (394)
T ss_pred CCcEEEEecccCCccC-CCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCC
Confidence 4689999999999998 578899999999999999999999999999999999999987654235688888889999756
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccc-----cccCCCh--hhhh--hh-cccccCccHHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS-----VVGQVNP--KVEI--FT-QARDCLLPMGI 197 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~-----~~~~~~~--~~~~--~~-~~~~~~~~~g~ 197 (461)
+|+++|+++|+||++++..|+++|++|.+|++||+|+|+||+.|+. .+..+.. .+.. .. ..+.....|++
T Consensus 81 ~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (394)
T PRK09051 81 TPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGV 160 (394)
T ss_pred CceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCCCHHH
Confidence 8999999999999999999999999999999999999999987641 1111111 1110 00 11111236999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCC
Q 012522 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (461)
Q Consensus 198 ~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~p 277 (461)
++++|+++||+|||++|+|++++|+||.+|+++|+|++||+|+.++.+ + .+.++++|+++|+++|+|++.+++|
T Consensus 161 ~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~---~---~~~~~~~da~~r~~~t~e~v~~~~~ 234 (394)
T PRK09051 161 TAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTR---K---GEVVFDTDEHVRADTTLEDLAKLKP 234 (394)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCC---C---CCeEECCCCCCCCCCCHHHHcCCCC
Confidence 999999999999999999999999999999999999999999987542 1 1267899999999999999999999
Q ss_pred CCCCC-CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccE
Q 012522 278 AFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINL 356 (461)
Q Consensus 278 vf~~~-g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~ 356 (461)
+|+++ |++|.+|||+++|||+|+||++++.|++++.+|+++|.+++....+|..++.++..+++++|+++|++++|||+
T Consensus 235 v~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~ 314 (394)
T PRK09051 235 VFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPATQKALERAGLTVADLDV 314 (394)
T ss_pred cccCCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCCcccccHHHHHHHHHHHcCCCHHHcCE
Confidence 99875 89999999999999999999999999999999999999999988888878888899999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEE
Q 012522 357 FEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436 (461)
Q Consensus 357 ~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~ 436 (461)
||+||+|+.+++.+.|.||+++.|||++||++++|||+||||+++++++++||+++ +.++||+++|+|||+|.|+|||
T Consensus 315 ~ei~d~f~~~~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~--~~~~g~~~~c~~gG~g~a~~~e 392 (394)
T PRK09051 315 IEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQRI--GGRYALVTMCIGGGQGIAAIFE 392 (394)
T ss_pred EEecCccHHHHHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHHHHHHHhc--CCCEEEEEEccccChhhEEEEE
Confidence 99999999999999999999999999999999999999999999999999999998 8999999999999999999999
Q ss_pred Ec
Q 012522 437 RG 438 (461)
Q Consensus 437 ~~ 438 (461)
+.
T Consensus 393 ~~ 394 (394)
T PRK09051 393 RL 394 (394)
T ss_pred eC
Confidence 73
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-72 Score=576.54 Aligned_cols=388 Identities=47% Similarity=0.707 Sum_probs=344.3
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHc-CCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE 126 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~a-gl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~ 126 (461)
|++|+|||++||||+|.+.|.|++.++.||+.+|+++||+++ ||+++|||.|++|++.++..++.+.++.+...+|++.
T Consensus 5 m~~v~Ivg~~rTpfg~~~~g~~~~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~ 84 (399)
T PRK09052 5 LQDAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPN 84 (399)
T ss_pred CCcEEEEEeccCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCC
Confidence 679999999999999734688999999999999999999997 9999999999999988776545678888888889975
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccc-cCCChhhhhhhcccccCccHHHHHHHHHHH
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV-GQVNPKVEIFTQARDCLLPMGITSENVAQR 205 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 205 (461)
.+|+++|+++|+||+.|+..|+++|++|++|++|++|+|+||+.|+... ......+...+........|++++++|+++
T Consensus 85 ~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 164 (399)
T PRK09052 85 SVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQ 164 (399)
T ss_pred CCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999998773100 011111111111111124799999999999
Q ss_pred hCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCC--CCc--ccceeeeccCCCCCCCCHHHHhccCCCCCC
Q 012522 206 FGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPK--TGV--EKRVTISVDDGIRPNTTIADLAKLKPAFKK 281 (461)
Q Consensus 206 ~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~--~~~--~~~~~v~~de~~r~~~t~e~l~~~~pvf~~ 281 (461)
||+|||++|+|++++|+||.+||++|+|+.||.|+++...++. .|. .+..++..|+++|++.|+|.|.++||+|+|
T Consensus 165 ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~f~~ 244 (399)
T PRK09052 165 WKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFAN 244 (399)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCCccCC
Confidence 9999999999999999999999999999999999987543211 111 134578999999999999999999999999
Q ss_pred CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecC
Q 012522 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361 (461)
Q Consensus 282 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eihe 361 (461)
+|++|.+|||+++|||+|+||++++.|++++.+|+++|++++..+.+|..++.++..+++++|+++|++++|||++|+||
T Consensus 245 ~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~did~~ei~D 324 (399)
T PRK09052 245 KGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIPAALKQAGLKQDDLDWIELNE 324 (399)
T ss_pred CCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCCCccchhHHHHHHHHHHHcCCCHHHcCEEEeCc
Confidence 99999999999999999999999999999999999999999999888888888899999999999999999999999999
Q ss_pred CChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 362 AFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 362 afa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+|+++++.++|.||+++.|+|++||.+++|||.|+||+++++++++||+++ +.++||+++|+|||+|.|++||+
T Consensus 325 ~f~~~~l~~~e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~--~~~~g~~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 325 AFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRT--NLKYGMVTMCVGTGMGAAGIFER 398 (399)
T ss_pred HHHHHHHHHHHHhCCCCcccCCCCchhhcCchHHHHHHHHHHHHHHHHHhc--CCCeEEEEEcccCCceeEEEEEe
Confidence 999999999999999999999999999999999999999999999999998 89999999999999999999997
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-72 Score=576.82 Aligned_cols=380 Identities=40% Similarity=0.577 Sum_probs=341.3
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~-agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
++|||||++||||+| ++|.+++.++.+|+.++++++|++ +||+|++||.+++|++.+...++++++|.+++.+|+|.+
T Consensus 2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~ 80 (400)
T PRK13359 2 TEAFICDAIRTPIGR-YGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHG 80 (400)
T ss_pred CcEEEEeccCCCccC-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCC
Confidence 489999999999998 689999999999999999999996 699999999999999987655458899999999999888
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccc--c-ccCCC---hhhhhh-------hc--ccccC
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS--V-VGQVN---PKVEIF-------TQ--ARDCL 192 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~--~-~~~~~---~~~~~~-------~~--~~~~~ 192 (461)
+|+++|+++|+||++|+..|++.|++|++|++|++|+|+||+.|+. . +..+. +.+... +. +....
T Consensus 81 vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
T PRK13359 81 VPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYGV 160 (400)
T ss_pred CceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCcccccccc
Confidence 9999999999999999999999999999999999999999998851 1 11111 111100 11 11223
Q ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHH
Q 012522 193 LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL 272 (461)
Q Consensus 193 ~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l 272 (461)
.+|+.++|+++++||+|||+||+|+++||+++..+...|+|++||+|++++.+ +| ...+++.||.+|+ +|+|+|
T Consensus 161 ~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~---~~--~~~~~~~De~~r~-~t~e~l 234 (400)
T PRK13359 161 DSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQK---KG--DPLVVSRDEHPRE-TTLEAL 234 (400)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccC---CC--CceeecCCCCCCC-CCHHHH
Confidence 57999999999999999999999999999998888888899999999987431 11 2256999999997 999999
Q ss_pred hccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCC
Q 012522 273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQID 352 (461)
Q Consensus 273 ~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~ 352 (461)
.+++|+|+|+|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++..+.+|..++.++..+++++|+++|++++
T Consensus 235 ~~l~p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~ 314 (400)
T PRK13359 235 AKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPRVMGIGPAPATQKLLARLGMTLD 314 (400)
T ss_pred hcCCCccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCCccchhHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999999999999999999999999999999998778888888899999999999999999
Q ss_pred CccEEEecCCChHHHHHHHHHcCCCC--CCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcce
Q 012522 353 DINLFEINEAFASQYVYCIKKLGLDP--EKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMG 430 (461)
Q Consensus 353 DID~~eiheafa~~~~~~~e~LGl~~--~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g 430 (461)
|||+||+||+|+.+.+.++|.||++. .|+|++||.+++|||+|+||+++++++++||+++ +.++||+++|+|||+|
T Consensus 315 DID~iei~dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~~--~~~~g~~~~c~~gG~g 392 (400)
T PRK13359 315 QFDVIELNEAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLERT--GGRFALCTMCIGVGQG 392 (400)
T ss_pred HcCcCccCcHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhhc--CCCeEEEEEcccCCce
Confidence 99999999999999999999999954 7999999999999999999999999999999998 8999999999999999
Q ss_pred eEEEEEE
Q 012522 431 AAAVFER 437 (461)
Q Consensus 431 ~A~v~~~ 437 (461)
.|+|||+
T Consensus 393 ~a~~ie~ 399 (400)
T PRK13359 393 IAIAIER 399 (400)
T ss_pred eEEEEEe
Confidence 9999997
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-72 Score=572.95 Aligned_cols=379 Identities=37% Similarity=0.535 Sum_probs=344.1
Q ss_pred CcEEEEeeeecccc--ccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCC
Q 012522 49 DDVVIVAAYRTAIC--KAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE 126 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~--r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~ 126 (461)
++||||++.||||+ |.+.|+|++.++.+|+..+++++|++++++|++||.|++|++.+...++++++|++++..|+|.
T Consensus 2 ~~vvIv~~~RTp~g~~~~~~G~l~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~ 81 (417)
T PRK06025 2 AEAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDI 81 (417)
T ss_pred CceEEEeeccCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCC
Confidence 47999999999998 7447999999999999999999999999999999999999998876546899999999999999
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccc--cC--CChhhhhh--hc--ccccCccHHHH
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV--GQ--VNPKVEIF--TQ--ARDCLLPMGIT 198 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~--~~--~~~~~~~~--~~--~~~~~~~~g~~ 198 (461)
++|.++||+.|+||++||.+|++.|++|++|++|++|+|+||+.|+... .+ ....+.+. +. +.....+||.+
T Consensus 82 ~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~ 161 (417)
T PRK06025 82 KASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVC 161 (417)
T ss_pred CCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCHHHH
Confidence 9999999999999999999999999999999999999999999986211 01 11111110 11 11233589999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCC
Q 012522 199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278 (461)
Q Consensus 199 a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pv 278 (461)
+|+++++||||||+||+||+.||++|.++++.|+|++||+|++. + ++ ..+++.||.+|+.+|+|+|.++||+
T Consensus 162 ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~----~-~~---~~~~~~De~~R~~~t~e~la~L~p~ 233 (417)
T PRK06025 162 GDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYR----D-DG---SVALDHEEFPRPQTTAEGLAALKPA 233 (417)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEc----C-CC---CEEecCCCCCCCCCCHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999972 1 11 2569999999999999999999999
Q ss_pred CC--------CCCc------------------cccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCC
Q 012522 279 FK--------KDGT------------------TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM 332 (461)
Q Consensus 279 f~--------~~g~------------------lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~ 332 (461)
|+ ++|. +|.+|+|+++|||+|+||++++.|++++.+|.++|.+++..+.+|..+
T Consensus 234 F~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~~ 313 (417)
T PRK06025 234 FTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTLM 313 (417)
T ss_pred ccccccccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhh
Confidence 97 4787 899999999999999999999999999999999999999998888888
Q ss_pred CCcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc
Q 012522 333 GIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR 412 (461)
Q Consensus 333 ~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~ 412 (461)
+.++..+++++|+++|++++|||+||+||+|+.+.+.+++.+|++.+|+|++||++++|||+|+||+++++++++||+++
T Consensus 314 ~~~p~~Ai~~aL~~AGl~~~DID~~ei~eaFa~~~l~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~~ 393 (417)
T PRK06025 314 LNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERR 393 (417)
T ss_pred cccHHHHHHHHHHHcCCCHHHCcEEEEchHHHHHHHHHHHHcCCChhhccccCCHHhcCCchhHHHHHHHHHHHHHHHHh
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCEEEEEecccCcceeEEEEEE
Q 012522 413 GKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 413 ~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.++|++++|+|||+|.|++||+
T Consensus 394 --g~~~Gl~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 394 --GLKRGLVTMCAAGGMAPAIIIER 416 (417)
T ss_pred --CCCeEEEEEEeeccceeEEEEEe
Confidence 88999999999999999999997
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-73 Score=579.41 Aligned_cols=372 Identities=36% Similarity=0.562 Sum_probs=334.8
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
++|+|||++||||+| +.|++++.++.+|+.+|+++||+|+||+++|||.+++|++.+... +++.++.++..+|++.++
T Consensus 2 ~~v~Ivg~~rTp~gr-~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~-~~~~a~~~~~~~Gl~~~~ 79 (388)
T PRK06366 2 KDVYIVSAKRTAIGK-FGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV-GQNPAGQAAYHAGLPFGV 79 (388)
T ss_pred CcEEEEEcccCCccc-CCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCc-cCcHHHHHHHHCCCCCCC
Confidence 589999999999998 568888999999999999999999999999999999999876554 567788999999997668
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc------ccCC----Chhhhh--hhcc-ccc--Cc
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV------VGQV----NPKVEI--FTQA-RDC--LL 193 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~------~~~~----~~~~~~--~~~~-~~~--~~ 193 (461)
|.++++++|+||+.++..|++.|++|++|++|++|+|+||+.|+.. +..+ ...+.. .+.+ .++ +.
T Consensus 80 p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 159 (388)
T PRK06366 80 TKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFE 159 (388)
T ss_pred cceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCc
Confidence 9999999999999999999999999999999999999999765421 1000 000110 0111 111 34
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHh
Q 012522 194 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA 273 (461)
Q Consensus 194 ~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~ 273 (461)
+|++.+++|+++||+|||++|+|++++|+||.+||++|+|++||+|+.. +++||++| ++|+|+++
T Consensus 160 ~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~--------------~~~d~~~r-~~t~e~~~ 224 (388)
T PRK06366 160 HMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFND--------------LDRDEGIR-KTTMEDLA 224 (388)
T ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccc--------------cccccCcc-cCCHHHHh
Confidence 6899999999999999999999999999999999999999999999851 67899999 79999999
Q ss_pred ccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCC
Q 012522 274 KLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDD 353 (461)
Q Consensus 274 ~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~D 353 (461)
++||+|+|+|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++..+.+|..+..++..+++++|+++||+++|
T Consensus 225 ~s~~v~~p~g~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~D 304 (388)
T PRK06366 225 KLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVEAPIPATRKLLEKQNKSIDY 304 (388)
T ss_pred hCCCccCCCCCEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHHhcccHHHHHHHHHHHcCCCHHH
Confidence 99999999999999999999999999999999999999999989999999988888778778889999999999999999
Q ss_pred ccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEE
Q 012522 354 INLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAA 433 (461)
Q Consensus 354 ID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~ 433 (461)
||++|+||+|+++++.++|.|||+.+|||++||++++|||+||||+++++++++||+++ +.++||+++|+|||+|.|+
T Consensus 305 iDv~Ei~daFa~~~l~~le~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~--~~~~g~~~~c~~gg~g~a~ 382 (388)
T PRK06366 305 YDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTR--HMKTGLATLCHGGGGAHTL 382 (388)
T ss_pred cceeeccchhHHHHHHHHHHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhc--CCCeEEEEEecccChhhEE
Confidence 99999999999999999999999988999999999999999999999999999999998 8999999999999999999
Q ss_pred EEEEcc
Q 012522 434 VFERGD 439 (461)
Q Consensus 434 v~~~~~ 439 (461)
|||+.+
T Consensus 383 ~~e~~~ 388 (388)
T PRK06366 383 TLEMVE 388 (388)
T ss_pred EEEecC
Confidence 999864
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-72 Score=572.14 Aligned_cols=379 Identities=37% Similarity=0.521 Sum_probs=337.7
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
++|||||++||||+| +.|+|++.++.||+.++++++|+++|++|++||.+++|++.+...++.++++.+++.+|++.++
T Consensus 2 ~~V~Ivg~~rTpfgk-~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~ 80 (387)
T PRK07850 2 GNPVIVEAVRTPIGK-RNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHV 80 (387)
T ss_pred CcEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCC
Confidence 589999999999998 6788999999999999999999999999999999999998754433467899999999998779
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc--ccCCChhhhhhhcccccCccHHHHHHHHHHHh
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV--VGQVNPKVEIFTQARDCLLPMGITSENVAQRF 206 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 206 (461)
|+++|+++|+||++|+..|++.|++|++|++|++|+|+||+.|+.. +..+....... .. .....|+.++++|+++|
T Consensus 81 p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~-~~-~~~~~m~~~ae~~~~~y 158 (387)
T PRK07850 81 GATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDS-WD-IDMPNQFEAAERIAKRR 158 (387)
T ss_pred ceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccc-cc-cCcchHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999987521 11111111000 01 11245778999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCCCcccccccccccc----CCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCC
Q 012522 207 GVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIV----DPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD 282 (461)
Q Consensus 207 g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~----~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~ 282 (461)
|+|||+||+|+++||+||.+++++|+|++||+|++++.. +|.. .. .+++.||.+| ++|+|+|.+++|+| ++
T Consensus 159 gisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~-~~--~~~~~D~~~r-~~t~e~l~~l~p~~-~~ 233 (387)
T PRK07850 159 GITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTG-ET--RLVTRDQGLR-DTTMEGLAGLKPVL-EG 233 (387)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCC-Cc--eEeecCCCcc-cCCHHHhccCCCCC-CC
Confidence 999999999999999999999999999999999987643 2221 11 3699999999 99999999999999 77
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCC
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEA 362 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eihea 362 (461)
|++|.+|||+++|||+|+||++++.|++++.+|.++|.+++....+|..+..++..+++++|+++|++++|||++|+||+
T Consensus 234 ~~~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~ 313 (387)
T PRK07850 234 GIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQATAKVLEKAGMKIGDIDLVEINEA 313 (387)
T ss_pred CCccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCchhhcchHHHHHHHHHHHcCCCHHHcCeeeeccc
Confidence 88899999999999999999999999999999989999999877777777788899999999999999999999999999
Q ss_pred ChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 363 FASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 363 fa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+++++.++|.||++.+|+|++||++++|||.|+||+++++|+++|||++ +.++||+++|+|||+|.|++||+
T Consensus 314 F~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~--~~~~g~~~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 314 FASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELERT--DKSTALITMCAGGALSTGTIIER 386 (387)
T ss_pred chHHHHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhc--CCCeEEEEEccccCceeEEEEEe
Confidence 99999999999999989999999999999999999999999999999998 89999999999999999999997
|
|
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-74 Score=540.19 Aligned_cols=382 Identities=40% Similarity=0.593 Sum_probs=355.3
Q ss_pred CCCCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCC
Q 012522 46 AFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP 125 (461)
Q Consensus 46 ~~~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~ 125 (461)
+++++|+||++.|||++. |.|+|...+..+|..-|++.||+++.+++++++-||+|++++... |++++|++++..|||
T Consensus 3 ~~~k~V~IVsaARTPIGs-F~gslssl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~Anl-GQapaRQaalgAGlp 80 (396)
T KOG1390|consen 3 LSSKDVFIVSAARTPIGS-FRGSLSSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANL-GQAPARQAALGAGLP 80 (396)
T ss_pred CCCCceEEEeeccccccc-cccccccCchhhHHHHHHHHHHHhcCCCHHHhhhhhhcccccccc-CcchHHHHHhhcCCC
Confidence 457899999999999995 899999999999999999999999999999999999999999988 999999999999999
Q ss_pred CCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccc----cccCCC-----hhhh-hhhcccccCccH
Q 012522 126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS----VVGQVN-----PKVE-IFTQARDCLLPM 195 (461)
Q Consensus 126 ~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~----~~~~~~-----~~~~-~~~~~~~~~~~~ 195 (461)
..+++.+||..|+||+.|+.+|++.|+.|..|+++++|.|+||+.|+. .+..++ +.+. +-..+.....+|
T Consensus 81 ~sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~M 160 (396)
T KOG1390|consen 81 YSVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLYVARGGVKYGGVQLVDGIVKDGLTDAYDKCHM 160 (396)
T ss_pred cceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchhhhccCcCcCCeeeeechhhcchHHHhccCCc
Confidence 999999999999999999999999999999999999999999999952 222332 2111 112233445789
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhcc
Q 012522 196 GITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKL 275 (461)
Q Consensus 196 g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~ 275 (461)
|.++|+.+++|+||||+||.||+.||.|+..++++|.|..||+||+++.+.. .+++++||.+++..+.+++.++
T Consensus 161 G~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg------~~~v~~DEe~~k~~~~~~~~~l 234 (396)
T KOG1390|consen 161 GICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRG------ETVVKKDEEPKKGSNIEKLSKL 234 (396)
T ss_pred chhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCC------cEEeccchhhhcccchhhhccc
Confidence 9999999999999999999999999999999999999999999999976432 5789999999999999999999
Q ss_pred CCCCCC-CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCc
Q 012522 276 KPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDI 354 (461)
Q Consensus 276 ~pvf~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DI 354 (461)
||+|.. .|++|..|+|.+.|||+|+||++.+.+.++|++|+++|++|+.+..+|.++..+|..+++++|+++||..+||
T Consensus 235 ~~vF~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~iaP~laipk~lk~aG~~~sdV 314 (396)
T KOG1390|consen 235 RPVFKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIAPALAIPKALKKAGLEQSDV 314 (396)
T ss_pred cceeecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccchHHHHHHHHHHcCcchhhh
Confidence 999965 6789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEE
Q 012522 355 NLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAV 434 (461)
Q Consensus 355 D~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v 434 (461)
|+||+||+|+...+...+.||+++++||++||..++|||+|+||+|.++++++.|+++ ++++|+++.|.|||.+.+++
T Consensus 315 d~~EiNEAFs~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~~--~g~~GvAaiCnGGGgasa~v 392 (396)
T KOG1390|consen 315 DYWEINEAFSVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQK--GGKIGVAAICNGGGGASAMV 392 (396)
T ss_pred hHHhhhhhhhHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHhh--CCceeEEEEecCCCceeeEE
Confidence 9999999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred EEE
Q 012522 435 FER 437 (461)
Q Consensus 435 ~~~ 437 (461)
+++
T Consensus 393 iek 395 (396)
T KOG1390|consen 393 IEK 395 (396)
T ss_pred Eec
Confidence 986
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-72 Score=573.95 Aligned_cols=380 Identities=39% Similarity=0.589 Sum_probs=339.4
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
++|+|||++||||+| ++|.+++.++.+|+.+|+++||+++|++|++||.|++|++++... +.++++.++..+|++.+.
T Consensus 2 ~~v~Ivg~~rTpfg~-~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~-~~~~~~~~~~~~Gl~~~~ 79 (393)
T PRK08235 2 SKTVIVSAARTPFGK-FGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQ-GQIPSRQAARAAGIPWEV 79 (393)
T ss_pred CcEEEEecCcCCccC-CCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCC-CCCHHHHHHHHcCCCCCc
Confidence 589999999999998 678899999999999999999999999999999999999876443 667888889999997679
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc-----ccCCCh--hhhh---hh-cccccCccHHH
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQVNP--KVEI---FT-QARDCLLPMGI 197 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~-----~~~~~~--~~~~---~~-~~~~~~~~~g~ 197 (461)
|+++|+++|+||+++|..|+++|++|.+|++|++|+|+||+.|+.. +..+.. .+.. .+ ........|+.
T Consensus 80 p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (393)
T PRK08235 80 QTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGV 159 (393)
T ss_pred ceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHHH
Confidence 9999999999999999999999999999999999999999877421 111111 1110 11 01112246999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCC
Q 012522 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (461)
Q Consensus 198 ~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~p 277 (461)
++++|+++||+|||++|+|++++|+||.+|+++|+|++||+|+++..+ + .+.+++++|+++|+++|+|++++++|
T Consensus 160 ~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~---~--~~~~~~~~da~~r~~~t~e~~~~~~~ 234 (393)
T PRK08235 160 YGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQR---K--GDPIVVAKDEAPRKDTTIEKLAKLKP 234 (393)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCC---C--CCceEeCCCCCCCCCCCHHHHhcCCC
Confidence 999999999999999999999999999999999999999999987532 1 22367899999999999999999999
Q ss_pred CCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 278 vf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
+|+|+|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++....++..+...+..+++++|+++|++++|||++
T Consensus 235 v~~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ 314 (393)
T PRK08235 235 VFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEKTGKTVEDIDLF 314 (393)
T ss_pred cccCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhhhcchHHHHHHHHHHHhCCCHHHCCee
Confidence 99999999999999999999999999999999999999999999887766666666777899999999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 358 EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 358 eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+||+|+.+.+.++|.||++++|+|++||++++|||+|+||+++++++++||+++ +++++++++|+|||+|.|+|||+
T Consensus 315 e~~d~f~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~--~~~~g~~~~c~~gG~g~a~~~e~ 392 (393)
T PRK08235 315 EINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRR--GGGIGIAAICSGGGQGDAVLIEV 392 (393)
T ss_pred hhcchhHHHHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhc--CCCeEEEEEcccccceEEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999998 88999999999999999999997
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-72 Score=572.09 Aligned_cols=385 Identities=49% Similarity=0.742 Sum_probs=342.0
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
++|||||++||||+|.+.|+|++.++.||+.+|+++||+++|+.+++||.+++|++.++..++++.+++++..+|++..+
T Consensus 2 ~~v~Ivg~~rTpfg~~~~g~l~~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~ 81 (391)
T PRK07661 2 REAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTV 81 (391)
T ss_pred CcEEEEEccCCCcccCCCCccCCCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCc
Confidence 47999999999999865788999999999999999999999988899999999998876544577889999999997569
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc-ccCCChhhhhhhcccccCccHHHHHHHHHHHhC
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-VGQVNPKVEIFTQARDCLLPMGITSENVAQRFG 207 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 207 (461)
|+++|+++|+||+.|+..|++.|++|.+|++||+|+|+||..|+.. .......+.. ..+.....|++++++|+++||
T Consensus 82 p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~--~~~~~~~~m~~~a~~~~~~~g 159 (391)
T PRK07661 82 PAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVE--AAPEYYMGMGHTAEQVAVKYG 159 (391)
T ss_pred ceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccc--cccchhhhHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999876410 0000111110 111123358999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCC-CCC--cccceeeeccCCCCCCCCHHHHhccCCCCCCCCc
Q 012522 208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDP-KTG--VEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT 284 (461)
Q Consensus 208 ~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~-~~~--~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~ 284 (461)
+|||++|+|++++|+||..||++|+|+.||+|++++.++- +++ .....+++.||++|++.|+|.+.+++|+|.++|+
T Consensus 160 ~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~~g~ 239 (391)
T PRK07661 160 ISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVKGS 239 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCCCCC
Confidence 9999999999999999999999999999999998864200 011 1123679999999999999999999999988899
Q ss_pred cccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCCh
Q 012522 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFA 364 (461)
Q Consensus 285 lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa 364 (461)
+|.+|||+++|||+|+||++++.|++++.+|+++|.+++..+.+|..++.++..+++++|+++||+++|||+||+||+|+
T Consensus 240 lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~f~ 319 (391)
T PRK07661 240 VTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAGLELSDIGLFELNEAFA 319 (391)
T ss_pred EeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCCcccchHHHHHHHHHHHHcCCCHHHCCEEEeCCHHH
Confidence 99999999999999999999999999999999999999999888887878888999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 365 SQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 365 ~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
.+++.++|.||+++.|+|++||++++|||.|+||+++++++++||+++ ++++||+++|+|||+|.|++||+
T Consensus 320 ~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~--~~~~g~~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 320 SQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRR--NEQFGIVTMCIGGGMGAAGVFEL 390 (391)
T ss_pred HHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhc--CCCeEEEEEccccChhhEEEEEe
Confidence 999999999999999999999999999999999999999999999998 89999999999999999999997
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-72 Score=570.48 Aligned_cols=379 Identities=37% Similarity=0.616 Sum_probs=342.0
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
++||||++.||||+| ++|.|++.++.+|+.++++++|+++||+|++||.+++|++.+... +++.++.+++.+|+|.++
T Consensus 3 ~~~~iv~~~Rtp~~~-~~g~l~~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~-g~~~~r~~~~~~Gl~~~~ 80 (392)
T PRK06633 3 KPVYITHAKRTAFGS-FMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGS-GQNPARQTLIHAGIPKEV 80 (392)
T ss_pred CCEEEEeeccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCcccc-ccHHHHHHHHHCCCCCCc
Confidence 589999999999998 689999999999999999999999999999999999999987665 788999999999998779
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc----ccCCCh--hhh----hhhcccccCccHHHH
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV----VGQVNP--KVE----IFTQARDCLLPMGIT 198 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~----~~~~~~--~~~----~~~~~~~~~~~~g~~ 198 (461)
|+++|+++|+||+.|+..|++.|++|++|++|++|+|+||+.|... ...+.. ... +.+.+......|++.
T Consensus 81 p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 160 (392)
T PRK06633 81 PGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGIT 160 (392)
T ss_pred cchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcchHHHH
Confidence 9999999999999999999999999999999999999999765311 101111 010 011111122369999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCC
Q 012522 199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278 (461)
Q Consensus 199 a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pv 278 (461)
+++|+++||+|||++|+|++++|+||.+||++++|++||+|++++.++ | ..+++.|+.+|+..++|.|.+++|+
T Consensus 161 a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~---~---~~~~~~d~~~rp~~~~e~l~~l~p~ 234 (392)
T PRK06633 161 AENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKK---T---TSLFDHDETVRPDTSLEILSKLRPA 234 (392)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCC---C---ceeeccCCCCCCCCCHHHHccCCCc
Confidence 999999999999999999999999999999999999999999874311 1 1568999999999999999999999
Q ss_pred CCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 279 f~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
|+|.|++|.+|||+++|||+++||++++.|++++.+|+++|.+++....+|..++.++..+++++|+++||+++|||++|
T Consensus 235 ~~~~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~Al~~AGl~p~DID~~e 314 (392)
T PRK06633 235 FDKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKALSKAGWSVNDLEVIE 314 (392)
T ss_pred cCCCCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcchhchHHHHHHHHHHHHcCCCHHHcCeee
Confidence 99999999999999999999999999999999999999999999998888888878888999999999999999999999
Q ss_pred ecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 359 INEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 359 iheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+||+|+++.+++.|.|+++..|+|++||++++|||+||||+++++++++||+++ ++++|++++|+|||+|.|++||+
T Consensus 315 i~dafa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~--~~~~g~~~~c~~gG~g~a~~~e~ 391 (392)
T PRK06633 315 VNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRA--KAKKGLVTLCIGGGMGMAMCVEA 391 (392)
T ss_pred hhhHHHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhc--CCCeEEEEEecccChhheEEEEe
Confidence 999999999999999999999999999999999999999999999999999999 99999999999999999999997
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-71 Score=572.56 Aligned_cols=381 Identities=41% Similarity=0.624 Sum_probs=340.4
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
++|+|||++||||+| +.|.|++.++.||+.+|+++||+++||+++|||.|++|++.+... +++.++.++..+|++.+.
T Consensus 2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~-~~~~a~~va~~~Gl~~~~ 79 (404)
T PRK06205 2 RDAVICEPVRTPVGR-FGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGE-APAIGRVAALDAGLPVTV 79 (404)
T ss_pred CceEEEEeecCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCC
Confidence 589999999999998 678999999999999999999999999999999999999988766 677889999999997668
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccc-----cccCCCh--hhhh---hh--c--c-cccCc
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS-----VVGQVNP--KVEI---FT--Q--A-RDCLL 193 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~-----~~~~~~~--~~~~---~~--~--~-~~~~~ 193 (461)
|.++|+++|+||+.+|..|+++|++|.+|++||+|+|+||+.+.. ++..+.. .+.. .+ . . +....
T Consensus 80 p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (404)
T PRK06205 80 PGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPG 159 (404)
T ss_pred ceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCCC
Confidence 999999999999999999999999999999999999999986631 1111111 1111 10 0 1 11234
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHh
Q 012522 194 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA 273 (461)
Q Consensus 194 ~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~ 273 (461)
.|+.++++|+++||+|||+||+|++++|+||.++++.|+|++||+|+++..+ + ++..++++|+++|+++|+|++.
T Consensus 160 ~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~---~--~~~~~~~~da~~r~~~t~e~~~ 234 (404)
T PRK06205 160 GMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQR---K--GDPTVVDRDEHPRADTTLESLA 234 (404)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCC---C--CCceEeccCCCCCCCCCHHHHh
Confidence 5777899999999999999999999999999999999999999999987532 1 1225689999999999999999
Q ss_pred ccCCCC---CCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCC
Q 012522 274 KLKPAF---KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQ 350 (461)
Q Consensus 274 ~~~pvf---~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~ 350 (461)
++||+| +|+|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++....+|..++.++..+++++|+++||+
T Consensus 235 ~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~ 314 (404)
T PRK06205 235 KLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSRMGIGPVPATEKALARAGLT 314 (404)
T ss_pred cCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCccccccHHHHHHHHHHHcCCC
Confidence 999999 57899999999999999999999999999999999999999999988777777788999999999999999
Q ss_pred CCCccEEEecCCChHHHHHHHHHcCCCC---CCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccC
Q 012522 351 IDDINLFEINEAFASQYVYCIKKLGLDP---EKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGS 427 (461)
Q Consensus 351 ~~DID~~eiheafa~~~~~~~e~LGl~~---~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~ 427 (461)
++|||++|+||+|+++++.++|.|||++ .|+|++||++++|||.|+||+++++++++||+++ +.++||+++|+||
T Consensus 315 ~~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~--~~~~gl~~~c~~g 392 (404)
T PRK06205 315 LDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRR--QARYGLETMCIGG 392 (404)
T ss_pred HHHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhc--CCCeEEEEEeccC
Confidence 9999999999999999999999999997 5899999999999999999999999999999998 8999999999999
Q ss_pred cceeEEEEEEc
Q 012522 428 GMGAAAVFERG 438 (461)
Q Consensus 428 G~g~A~v~~~~ 438 (461)
|+|.|+|||+.
T Consensus 393 g~g~a~~~e~~ 403 (404)
T PRK06205 393 GQGLAAVFERV 403 (404)
T ss_pred ChhhEEEEEec
Confidence 99999999984
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-71 Score=565.88 Aligned_cols=380 Identities=37% Similarity=0.554 Sum_probs=337.1
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
++|||||++||||+| +.|.|++.++.||+.+|++++|+++||++++||.+++|++.+...++.+.+|.+.+..|+|.++
T Consensus 2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~v 80 (390)
T PRK06504 2 AEAYIVAAARTAGGR-KGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESV 80 (390)
T ss_pred CceEEEEcccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 489999999999998 6799999999999999999999999999999999999998854433467889888888998789
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccccc------CCChhhhhhhccc--ccCccHHHHHH
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG------QVNPKVEIFTQAR--DCLLPMGITSE 200 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~------~~~~~~~~~~~~~--~~~~~~g~~a~ 200 (461)
|.++|+++|+||++|+..|++.|++|++|++|++|+|+||+.|+.... .+........... ....+|+..++
T Consensus 81 P~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aae 160 (390)
T PRK06504 81 PGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGAE 160 (390)
T ss_pred ceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999987742111 1111000000111 11347889999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCC
Q 012522 201 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280 (461)
Q Consensus 201 ~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~ 280 (461)
+|+++||+|||+||+|+++||+||.+|+++|+|++||+|+++..+ + .+...++.||.+|+.+|+|++.+++|+++
T Consensus 161 ~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~---~--~~~~~~~~De~~r~~~t~e~l~~~~~~~~ 235 (390)
T PRK06504 161 MMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRA---D--GSGEMHTVDEGIRFDATLEGIAGVKLIAE 235 (390)
T ss_pred HHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCC---C--CCceEEccCCCCCCCCCHHHHhcCCCCCC
Confidence 999999999999999999999999999999999999999987532 1 12357899999999999999999999864
Q ss_pred CCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEec
Q 012522 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360 (461)
Q Consensus 281 ~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eih 360 (461)
+|++|.+|||+++|||+|+||++++.|++++.+|..++.++.....++..+..++..+++++|+++|++++|||++|+|
T Consensus 236 -~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~Did~~Ei~ 314 (390)
T PRK06504 236 -GGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPVIMLEAPLPATERALKKAGMKIDDIDLYEVN 314 (390)
T ss_pred -CCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCchhhhccHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 4899999999999999999999999999999999888998887777777778888999999999999999999999999
Q ss_pred CCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 361 EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 361 eafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+|+++.+.++|.||||+.|||++||++++|||.|+||++++.++++|||+. ++++|++++|+|||++.++||++
T Consensus 315 d~Fa~~~l~~~e~lG~~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~~--~~~~gl~~~~~ggg~g~a~ile~ 389 (390)
T PRK06504 315 EAFASVPLAWLKATGADPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQR--GKRYGLQTMCEGGGMANVTIVER 389 (390)
T ss_pred ccchHHHHHHHHHhCCCCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHhh--CCCeEEEEEeecccceeEEEEEe
Confidence 9999999999999999999999999999999999999999999999999998 89999999999999999999986
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-71 Score=568.73 Aligned_cols=385 Identities=44% Similarity=0.710 Sum_probs=346.2
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
++|||||++||||++.+.+++++.++.+|+.+|++++|+++|++|++||.|++|++.++..++++.++.+++.+|++.++
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~l~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~ 81 (392)
T PRK07108 2 TEAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTV 81 (392)
T ss_pred CcEEEEecccCCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCC
Confidence 58999999999999866788999999999999999999999999999999999999987764467999999999998679
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccccc-CCChhhhhhhcccccCccHHHHHHHHHHHhC
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-QVNPKVEIFTQARDCLLPMGITSENVAQRFG 207 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 207 (461)
|+++|+++|+||+.||..|+++|++|++|++|++|+|+||+.|..... .....+..+ ...+.+..|+.++|+++.+|+
T Consensus 82 p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~-~~~~~~~~m~~~ae~~a~~~~ 160 (392)
T PRK07108 82 PGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVE-HKPEIYWSMLQTAENVAKRYG 160 (392)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhc-cCCccccCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999987653221 111111100 011223468999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccc--cCCCCC--cccceeeeccCCCCCCCCHHHHhccCCCCCCCC
Q 012522 208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKI--VDPKTG--VEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG 283 (461)
Q Consensus 208 ~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~--~~~~~~--~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g 283 (461)
++||++|+|+..+|++|..+.+.|+|++||+|+++.+ .+|..+ ..+..++++||++|+++|+|+|.+++|+| +.|
T Consensus 161 i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~-~~g 239 (392)
T PRK07108 161 ISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSAL-PGG 239 (392)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCC-CCC
Confidence 9999999999999999999999999999999998764 245333 23346799999999999999999999999 678
Q ss_pred ccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 012522 284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAF 363 (461)
Q Consensus 284 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheaf 363 (461)
++|.+|||+++|||+|+||++++.|++++.+|+++|.+++....+|..++.++..+++++|+++||+++|||++|+||+|
T Consensus 240 ~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Did~~ei~eaf 319 (392)
T PRK07108 240 VITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLLKQAGLKVDDIDLWELNEAF 319 (392)
T ss_pred CCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCcccchhHHHHHHHHHHHcCCCHHHcCchHhhhHH
Confidence 99999999999999999999999999999999999999999888888888888999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 364 ASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 364 a~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+++.++++|.||+++.|||++||++++|||+|+||++.+.+++++|+++ +.++||+++|+|||+|.|++||+
T Consensus 320 a~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~~--~~~~g~~~~c~~gg~g~a~~ie~ 391 (392)
T PRK07108 320 AVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRR--GAKYVVVTMCIGGGQGAAGLFEV 391 (392)
T ss_pred HHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHhh--CCCEEEEEEccccChhhEEEEEe
Confidence 9999999999999999999999999999999999999999999999998 89999999999999999999997
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-71 Score=565.23 Aligned_cols=379 Identities=44% Similarity=0.663 Sum_probs=339.0
Q ss_pred cEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 50 ~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~-agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
+|+|||++||||+|.+.|++++.++.||+.++++++|++ +|++|++||.+++|++.+...++.++++.+.+..|+|..+
T Consensus 1 ~v~Ivg~~rTpfg~~~~gs~~~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~ 80 (385)
T TIGR02445 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS 80 (385)
T ss_pred CEEEEecccCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc
Confidence 589999999999986679999999999999999999996 5999999999999998644333567899999899998889
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCC
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGV 208 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~ 208 (461)
|+++|+++|+||+.|+..|++.|++|++|++|++|+|+||+.|...+..+...+... ..+....|++++++|+++||+
T Consensus 81 p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~~~ygi 158 (385)
T TIGR02445 81 AAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLH--VAKAAGMMGLTAEMLGKMHGI 158 (385)
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhh--hccccchHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999987753222222222111 011224799999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-CCcccc
Q 012522 209 TRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTA 287 (461)
Q Consensus 209 sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~g~lt~ 287 (461)
|||++|+|++++|+||.+|+++|+|++||+|++++.++ + ..+++++|+++|+++|+|++.++||+|+| +|.+|.
T Consensus 159 tre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~---~--~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~ 233 (385)
T TIGR02445 159 SREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDAD---G--FLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTA 233 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCC---C--CceeeCCCCCCCCCCCHHHHhcCCceecCCCCceec
Confidence 99999999999999999999999999999999886421 1 22568999999999999999999999998 899999
Q ss_pred CCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHHH
Q 012522 288 GNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQY 367 (461)
Q Consensus 288 ~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~ 367 (461)
+|||+++|||+|+||++++.+++++.+|+++|.+++..+.+|..++.++..+++++|+++|++++|||++|+||+|++++
T Consensus 234 ~~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~daFa~~~ 313 (385)
T TIGR02445 234 GTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQA 313 (385)
T ss_pred ccCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEEccccHHHH
Confidence 99999999999999999999999999999999999998777777777888999999999999999999999999999999
Q ss_pred HHHHHHcCCCC---CCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 368 VYCIKKLGLDP---EKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 368 ~~~~e~LGl~~---~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.++|.|||++ .|+|++||++++|||.||||++++.++++.|+++ +.++||+++|+|+|+|.|++||+
T Consensus 314 l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~~--~~~~Gl~~~~~g~g~g~a~~~e~ 384 (385)
T TIGR02445 314 LPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQK--DATFGLATMCIGLGQGIATVFER 384 (385)
T ss_pred HHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHhc--CCCeEEEEEecccChhheEEEEe
Confidence 99999999976 7999999999999999999999999999888776 88999999999999999999997
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-71 Score=564.43 Aligned_cols=380 Identities=45% Similarity=0.682 Sum_probs=340.0
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~-agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
++|+|||++||||+|.+.|+|++..+.+|+.++++++|++ +||++++||.+++|++.+...++.+.++.++..+|+|..
T Consensus 2 ~~v~Ivg~~rTpfg~~~~g~~~~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~ 81 (387)
T PRK08947 2 EDVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHS 81 (387)
T ss_pred CcEEEEEccCCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCC
Confidence 5899999999999986579999999999999999999996 799999999999998875443346789999999999867
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhC
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFG 207 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 207 (461)
+|+++|+++|+||+.|+..|+++|++|++|++|++|+|+||..|...+..+...+.+ +. .+....|++++++|+++||
T Consensus 82 ~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~a~~~~~~yg 159 (387)
T PRK08947 82 VPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSK-NV-AKAAGMMGLTAEMLGKMHG 159 (387)
T ss_pred CcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhh-hc-cccchHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999998764322222211111 11 1123479999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-CCccc
Q 012522 208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTT 286 (461)
Q Consensus 208 ~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~g~lt 286 (461)
+|||++|+|++++|+||.+|+.+|+|++||+|++++.++ ....++++|+++|+++|+|++++++|+|+| +|.+|
T Consensus 160 isre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~-----~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt 234 (387)
T PRK08947 160 ISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDAD-----GVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVT 234 (387)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCC-----CCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEE
Confidence 999999999999999999999999999999999876421 222578999999999999999999999998 88999
Q ss_pred cCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHH
Q 012522 287 AGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQ 366 (461)
Q Consensus 287 ~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~ 366 (461)
.+|||+++|||+|+||++++.+++++.+|+++|.+++..+.++..++.++..+++++|+++|++++|||++|+||+|+++
T Consensus 235 ~~~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DId~~El~d~F~~~ 314 (387)
T PRK08947 235 AGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQ 314 (387)
T ss_pred ccccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCcccccccHHHHHHHHHHHcCCCHHHCCEEEecccchHH
Confidence 99999999999999999999999999999899999999877777777778899999999999999999999999999999
Q ss_pred HHHHHHHcCCCC---CCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 367 YVYCIKKLGLDP---EKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 367 ~~~~~e~LGl~~---~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
++.++|.|||++ +|+|++||++++|||.||||+++++++++||+++ +.++|++++|+|+|+|.+++|++
T Consensus 315 ~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~~--~~~~gl~~~~~g~G~g~a~~~e~ 386 (387)
T PRK08947 315 SLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMERK--DAQFGLATMCIGLGQGIATVFER 386 (387)
T ss_pred HHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHhc--CCCEEEEEEeecccceeEEEEEe
Confidence 999999999976 6999999999999999999999999999999997 89999999999999999999987
|
|
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-71 Score=565.77 Aligned_cols=381 Identities=41% Similarity=0.610 Sum_probs=340.8
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~-agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
++|||||++||||+| +.|.+++.++.+|+.++++++|++ +||+|++||.|++|++.+....+.++++.+++.+|+|.+
T Consensus 2 ~~V~Ivg~~rTpfgk-~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~ 80 (401)
T PRK09050 2 TEAFICDAIRTPIGR-YGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVS 80 (401)
T ss_pred CcEEEEecccCCccc-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCC
Confidence 589999999999998 678899999999999999999995 799999999999999876544247899999999999878
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccc--c-ccCC---Chhhhh-------hhc--ccccC
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS--V-VGQV---NPKVEI-------FTQ--ARDCL 192 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~--~-~~~~---~~~~~~-------~~~--~~~~~ 192 (461)
+|+++|+++|+||+.|+..|++.|++|++|++|++|+|+||+.|+. . ...+ ...++. .+. +....
T Consensus 81 vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
T PRK09050 81 VPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKAQYGV 160 (401)
T ss_pred CceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCcccccccc
Confidence 9999999999999999999999999999999999999999988741 1 0011 010110 011 11223
Q ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHH
Q 012522 193 LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL 272 (461)
Q Consensus 193 ~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l 272 (461)
.+|++++|+|+++||+|||+||+||..||+|+..+.+.|+|++||+|++++.+ +| +.+++++|+++|+++|+|++
T Consensus 161 ~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~---~~--~~~~~~~da~~r~~~t~e~l 235 (401)
T PRK09050 161 DSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQK---KG--DPVVVDRDEHPRPETTLEAL 235 (401)
T ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccC---CC--CceeeCCCCCCCCCCCHHHH
Confidence 57999999999999999999999999999999999999999999999987542 12 22578999999999999999
Q ss_pred hccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCC
Q 012522 273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQID 352 (461)
Q Consensus 273 ~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~ 352 (461)
.+++|+|+|+|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++.....|..++.++..+++++|+++||+++
T Consensus 236 ~~l~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~ 315 (401)
T PRK09050 236 AKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPRIMGIGPAPATRKLLARLGLTID 315 (401)
T ss_pred hcCCCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHH
Confidence 99999999989999999999999999999999999999999999999999998777777778889999999999999999
Q ss_pred CccEEEecCCChHHHHHHHHHcCCCC--CCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcce
Q 012522 353 DINLFEINEAFASQYVYCIKKLGLDP--EKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMG 430 (461)
Q Consensus 353 DID~~eiheafa~~~~~~~e~LGl~~--~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g 430 (461)
|||++|+||+|+.+++.++|.||||+ .|+|++||.+++|||+|+||+++++++++|||++ +.++|++++|+|||+|
T Consensus 316 DId~~ei~D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~--~~~~g~~~~c~~gG~g 393 (401)
T PRK09050 316 QFDVIELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERT--GGRYALCTMCIGVGQG 393 (401)
T ss_pred HCCccccCcHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHhc--CCCeEEEEEcccccce
Confidence 99999999999999999999999975 6999999999999999999999999999999999 8999999999999999
Q ss_pred eEEEEEE
Q 012522 431 AAAVFER 437 (461)
Q Consensus 431 ~A~v~~~ 437 (461)
.|++||+
T Consensus 394 ~a~~~e~ 400 (401)
T PRK09050 394 IALAIER 400 (401)
T ss_pred eEEEEEe
Confidence 9999997
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-71 Score=566.33 Aligned_cols=380 Identities=42% Similarity=0.617 Sum_probs=339.2
Q ss_pred cEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 50 ~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~-agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
+|+|||++||||+| +.|.+++.++.+|+.++++++|++ ++|+|++||.+++|++.+....+.++++.+++.+|++.++
T Consensus 2 ~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~ 80 (400)
T TIGR02430 2 EAYICDAIRTPIGR-YGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSV 80 (400)
T ss_pred cEEEEecccCCccc-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 69999999999998 578899999999999999999994 7999999999999998765433578999999999998679
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccc--c-ccCC---Chhhh-------hhhcccc--cCc
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS--V-VGQV---NPKVE-------IFTQARD--CLL 193 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~--~-~~~~---~~~~~-------~~~~~~~--~~~ 193 (461)
|+++|+++|+||+.|+..|++.|++|++|++|++|+|+||+.|+. . +..+ ...++ ..+..++ ...
T Consensus 81 p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
T TIGR02430 81 PGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVD 160 (400)
T ss_pred ceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCcccccccccC
Confidence 999999999999999999999999999999999999999987741 1 1011 10111 0011112 235
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHh
Q 012522 194 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA 273 (461)
Q Consensus 194 ~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~ 273 (461)
.|++++++|+++||+|||+||+||++||+||.++++.|+|++||+|+.++++.. +..++++|+++|+++|+|++.
T Consensus 161 ~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~-----~~~~~n~da~~r~~~t~e~l~ 235 (400)
T TIGR02430 161 SMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKG-----EPTVVDQDEHPRPETTLEGLA 235 (400)
T ss_pred cHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCC-----CceeeCCCCccCCCCCHHHHh
Confidence 799999999999999999999999999999999999999999999999865321 014689999999999999999
Q ss_pred ccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCC
Q 012522 274 KLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDD 353 (461)
Q Consensus 274 ~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~D 353 (461)
+++|+|+|+|++|.+|||+++|||+|+||++++.|++++.+|.++|.+++....+|..++.++..+++++|+++|++++|
T Consensus 236 ~~~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~D 315 (400)
T TIGR02430 236 KLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIMGIGPVPATQKLLARAGLSIDQ 315 (400)
T ss_pred cCCCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccchHHHHHHHHHHHhCCCHHH
Confidence 99999999899999999999999999999999999999998889999998877777777778889999999999999999
Q ss_pred ccEEEecCCChHHHHHHHHHcCCCC--CCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCccee
Q 012522 354 INLFEINEAFASQYVYCIKKLGLDP--EKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA 431 (461)
Q Consensus 354 ID~~eiheafa~~~~~~~e~LGl~~--~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~ 431 (461)
||++|+||+|+.+.+.++|.||+++ .|+|++||++++|||+|+||+++++++++|||++ +.++||+++|+|||+|.
T Consensus 316 ID~~ei~D~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~--~~~~g~~~~c~~gG~g~ 393 (400)
T TIGR02430 316 FDVIELNEAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLERS--GGRYALCTMCIGVGQGI 393 (400)
T ss_pred CCCcccCcHHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHhc--CCCEEEEEEccccChhh
Confidence 9999999999999999999999975 7999999999999999999999999999999998 89999999999999999
Q ss_pred EEEEEE
Q 012522 432 AAVFER 437 (461)
Q Consensus 432 A~v~~~ 437 (461)
|+|||+
T Consensus 394 a~~~e~ 399 (400)
T TIGR02430 394 ALAIER 399 (400)
T ss_pred EEEEEe
Confidence 999997
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-72 Score=513.68 Aligned_cols=382 Identities=40% Similarity=0.619 Sum_probs=360.1
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
.+-||||++.||+|+. |.|++++.+..+|...|++.||+.+++.++.||.||+|++.....++.+.+|++.+..|+|.+
T Consensus 3 ~kgvfiVaAKRTaFGt-fGG~LKg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e 81 (396)
T KOG1391|consen 3 GKGVFIVAAKRTAFGT-FGGKLKGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKE 81 (396)
T ss_pred cceEEEEEeccccccc-ccccccCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCc
Confidence 5679999999999995 899999999999999999999999999999999999999998777788999999999999999
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccc-----ccccCCC------hhhhhhhcccccCccHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSI-----SVVGQVN------PKVEIFTQARDCLLPMG 196 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~-----~~~~~~~------~~~~~~~~~~~~~~~~g 196 (461)
+|..+||+.|.||.++|.++++.|.-|+++++|++|+|.||..|+ ++|..++ +.++....++++..+|+
T Consensus 82 ~pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa 161 (396)
T KOG1391|consen 82 TPALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMA 161 (396)
T ss_pred cCceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhhcchh
Confidence 999999999999999999999999999999999999999999998 4554332 33333444567788999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccC
Q 012522 197 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK 276 (461)
Q Consensus 197 ~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~ 276 (461)
+++|++..+|.+|||+.|+|+..|+++|.+++++|+|.+||.|++++.+ +.+.++.-||.+|+..|+|.|.+++
T Consensus 162 ~TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~k------kge~~f~vDEHpRp~TT~E~L~KLp 235 (396)
T KOG1391|consen 162 MTAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTK------KGEQTFQVDEHPRPQTTLEQLQKLP 235 (396)
T ss_pred hhHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeec------cCceeeEecCCCCccchHHHHhhCC
Confidence 9999999999999999999999999999999999999999999998754 3346788899999999999999999
Q ss_pred CCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccE
Q 012522 277 PAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINL 356 (461)
Q Consensus 277 pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~ 356 (461)
|+|.+||.+|.+|+|.++|||+|+|+.+++..+++.++|+++++++...+.+|..|+++|.++|+.+|+++|++.+|||+
T Consensus 236 pvFkKdG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~IMGIGPvPAI~~vLKksGlkl~DiDl 315 (396)
T KOG1391|consen 236 PVFKKDGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPSIMGIGPVPAISGVLKKSGLKLKDIDL 315 (396)
T ss_pred chhccCCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChhhccccCcHHHHHHHHHcCCcccccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEE
Q 012522 357 FEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436 (461)
Q Consensus 357 ~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~ 436 (461)
||++|+|+.+-+.+.+.|+++.+|+|++||.+++|||+|++|.+....++++|+++ +.+|++-+.|+|||+|.|++++
T Consensus 316 ~EvNEAFApQ~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr--~~KYgiGSACIGGGQGIA~l~e 393 (396)
T KOG1391|consen 316 VEVNEAFAPQYLAVERSLDLDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRR--GGKYGIGSACIGGGQGIAVLIE 393 (396)
T ss_pred EEechhhchHHHHHHHhhCCChhhccccCceeeccCccccCcchhhHHHHHHHHHc--CCccccccccccCCceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999 9999999999999999999998
Q ss_pred Ec
Q 012522 437 RG 438 (461)
Q Consensus 437 ~~ 438 (461)
..
T Consensus 394 ~~ 395 (396)
T KOG1391|consen 394 ST 395 (396)
T ss_pred ec
Confidence 75
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-70 Score=561.94 Aligned_cols=381 Identities=43% Similarity=0.667 Sum_probs=340.7
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
++|||||++||||+| +.|.+++.++.+|+.+|+++||+++|++|++||.|++|++.+... ++++++.++..+|++..+
T Consensus 2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~-~~~~a~~va~~lGl~~~~ 79 (393)
T PRK05656 2 QDVVIVAATRTAIGS-FQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGA-GQNPARQAAIKAGLPHSV 79 (393)
T ss_pred CcEEEEEcccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCC-CCcHHHHHHHHcCCCCCc
Confidence 589999999999998 578899999999999999999999999999999999999876544 667889999999997558
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc-----ccCCC--hhhhh---hhc-ccccCccHHH
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQVN--PKVEI---FTQ-ARDCLLPMGI 197 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~-----~~~~~--~~~~~---~~~-~~~~~~~~g~ 197 (461)
|+++|+++|+||+.+|..|+++|++|.+|++|++|+|+||..|+.. +..+. ..+.. .+. .......|++
T Consensus 80 p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 159 (393)
T PRK05656 80 PAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGI 159 (393)
T ss_pred ceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHHH
Confidence 9999999999999999999999999999999999999999977521 10110 01110 101 1011246999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCC
Q 012522 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (461)
Q Consensus 198 ~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~p 277 (461)
++++|+++||+|||++|+|+++||+||.+|+..++|++||+|+++..+. .+..+++.||.+|+.+|+|.|.+++|
T Consensus 160 ~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~-----~~~~~~~~D~~~r~~~~~e~l~~l~p 234 (393)
T PRK05656 160 TAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRK-----GEPLAFATDEQPRAGTTAESLAKLKP 234 (393)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCC-----CCceEeccCCCCCCCCCHHHHhcCCC
Confidence 9999999999999999999999999999998888999999999874321 12256889999999999999999999
Q ss_pred CCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 278 vf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
+|.++|.+|.+|||+++|||+|+||++++.|++++.+|+++|.+++....+|..++.++..+++++|+++|++++|||++
T Consensus 235 ~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~ 314 (393)
T PRK05656 235 AFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCLDKAGWSLAELDLI 314 (393)
T ss_pred CcCCCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCCcccchhHHHHHHHHHHHcCCCHHHCCEE
Confidence 99889999999999999999999999999999999999999999999888888888888999999999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 358 EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 358 eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+||+|+.+.+.++|.||++..|+|++||++++|||+||||+++++++++||+.+ ++++||+++|+|||+|.|+|||+
T Consensus 315 e~~d~f~~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~~--~~~~gl~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 315 EANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIRR--DAKKGLATLCIGGGQGVALAIER 392 (393)
T ss_pred EecCccHHHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHHc--CCCEEEEEEcccCcceEEEEEec
Confidence 9999999999999999999999999999999999999999999999999999988 99999999999999999999997
Q ss_pred c
Q 012522 438 G 438 (461)
Q Consensus 438 ~ 438 (461)
.
T Consensus 393 ~ 393 (393)
T PRK05656 393 D 393 (393)
T ss_pred C
Confidence 4
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-70 Score=560.10 Aligned_cols=382 Identities=42% Similarity=0.679 Sum_probs=336.5
Q ss_pred CcEEEEeeeeccccccC-----CCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcC
Q 012522 49 DDVVIVAAYRTAICKAK-----RGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAG 123 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~-----~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lG 123 (461)
++|+|||++||||+|.. .|+|++.++.+|+.+|+++||+++||+|+|||.+++|++.+++.+..+.++......+
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~~~~g~~~~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~ 81 (394)
T PRK06445 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLAR 81 (394)
T ss_pred CcEEEEecccCCccccCcCCCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcC
Confidence 58999999999999843 5899999999999999999999999999999999999988754312455666666667
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCC--Chhhhhhh----cccccCccHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV--NPKVEIFT----QARDCLLPMGI 197 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~--~~~~~~~~----~~~~~~~~~g~ 197 (461)
++.+.|+++|+++|+||+.++..|+++|++|.+|++|++|+|+||+.|+...... ...+..++ ........|++
T Consensus 82 ~~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 161 (394)
T PRK06445 82 LPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGL 161 (394)
T ss_pred CCCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHH
Confidence 7667999999999999999999999999999999999999999998664211000 00010000 11112235999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCC
Q 012522 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (461)
Q Consensus 198 ~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~p 277 (461)
++++|+++||+|||++|+|++++|+||.+|+..|+|++||+|+++. + ++ ...++++|+.+|+++|+|++.+++|
T Consensus 162 ~a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~-~---~~--~~~~~npda~~r~~~t~e~~~~~~~ 235 (394)
T PRK06445 162 TAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVE-V---EG--KKKVVDVDQSVRPDTSLEKLAKLPP 235 (394)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEec-C---CC--CceeeCCCCCCCCCCCHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999872 1 12 1256899999999999999999999
Q ss_pred CCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 278 vf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
+|+|+|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++....+|..++.++..+++++|+++|++++|||++
T Consensus 236 v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~~ 315 (394)
T PRK06445 236 AFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPVPASKKALEKAGLSVKDIDLW 315 (394)
T ss_pred ccCCCCcEecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCchhcchHHHHHHHHHHHcCCCHHHcCEE
Confidence 99998999999999999999999999999999999999999999999888887777888999999999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 358 EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 358 eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+||+|+++++.++|.||||+.|||++||++++|||.||||+++++++++||+.+ +.++||+++|+|||+|.|+|||+
T Consensus 316 e~~d~f~~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~--~~~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 316 EINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQIK--GKDYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred EecccchHHHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHhc--CCCEEEEEEcccCChhhEEEEEc
Confidence 9999999999999999999999999999999999999999999999999999976 89999999999999999999997
Q ss_pred c
Q 012522 438 G 438 (461)
Q Consensus 438 ~ 438 (461)
.
T Consensus 394 ~ 394 (394)
T PRK06445 394 V 394 (394)
T ss_pred C
Confidence 3
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-70 Score=557.39 Aligned_cols=382 Identities=40% Similarity=0.602 Sum_probs=338.9
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
++|||||++||||+| +.|.+++.++.||+.+|+++||+++||++++||.+++|++.+...++.++++.++..+|+|.++
T Consensus 2 ~~v~Iv~~~rTpfgk-~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~ 80 (401)
T PRK08131 2 LDAYIYDGLRSPFGR-HAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTV 80 (401)
T ss_pred CcEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCC
Confidence 589999999999998 5788999999999999999999999999999999999999766553578899999999998789
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc---ccCC--C-hhhhhh-------hccc--ccCc
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV---VGQV--N-PKVEIF-------TQAR--DCLL 193 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~---~~~~--~-~~~~~~-------~~~~--~~~~ 193 (461)
|+++|+++|+||+.|+..|++.|++|++|++|++|+|+||+.|+.. +..+ . ..+... +... ....
T Consensus 81 p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 160 (401)
T PRK08131 81 PGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGND 160 (401)
T ss_pred ceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCcccccccccC
Confidence 9999999999999999999999999999999999999999877411 1111 1 111110 1111 2234
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHh
Q 012522 194 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA 273 (461)
Q Consensus 194 ~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~ 273 (461)
.|++++++|+++||+|||++|+|+++||+++..+.+.++|++||.|+++.... + .+..+++.||++|+..|+|.|.
T Consensus 161 ~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~--~--~~~~~v~~De~~r~~~~~e~L~ 236 (401)
T PRK08131 161 SMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGR--K--LPPKLVAEDEHPRPSSTVEALT 236 (401)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEecccc--C--CCceEEecCCCCCCCCCHHHHh
Confidence 69999999999999999999999999999999999999999999999874210 0 1124589999999999999999
Q ss_pred ccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCC
Q 012522 274 KLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDD 353 (461)
Q Consensus 274 ~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~D 353 (461)
++||+| ++|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++....+|..++.++..+++++|+++|++++|
T Consensus 237 ~l~p~f-~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~d 315 (401)
T PRK08131 237 KLKPLF-EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIMGIGPVEAIKKALARAGLTLDD 315 (401)
T ss_pred cCCCCC-CCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHHH
Confidence 999999 5599999999999999999999999999999999999999999988888878888999999999999999999
Q ss_pred ccEEEecCCChHHHHHHHHHcCCC--CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCccee
Q 012522 354 INLFEINEAFASQYVYCIKKLGLD--PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA 431 (461)
Q Consensus 354 ID~~eiheafa~~~~~~~e~LGl~--~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~ 431 (461)
||+||+||+|+++++.++|.|||+ ..|||++||++++|||.||||+++++++++|||++ +.+++++.+|.|+|+|.
T Consensus 316 id~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~~--~~~~~~~~~~~ggg~g~ 393 (401)
T PRK08131 316 MDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQRR--GKRYAVVSLCIGVGQGL 393 (401)
T ss_pred CCeehhccHHHHHHHHHHHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHhc--CCCceEEEEEecCChhh
Confidence 999999999999999999999996 46999999999999999999999999999999999 88999999999999999
Q ss_pred EEEEEEc
Q 012522 432 AAVFERG 438 (461)
Q Consensus 432 A~v~~~~ 438 (461)
|+|||+.
T Consensus 394 a~i~e~~ 400 (401)
T PRK08131 394 AMVIERV 400 (401)
T ss_pred EEEEEec
Confidence 9999984
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-70 Score=563.29 Aligned_cols=379 Identities=37% Similarity=0.566 Sum_probs=334.6
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
.++|+|||++||||+| ++|.+++.++.||+.+|++++|+++||+|++||.+++|++.+... +.++++.+++.+|++..
T Consensus 4 ~~~v~Ivg~~rTpfgk-~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~-~~~~ar~~a~~aGl~~~ 81 (428)
T PRK08963 4 GDRIAIVSGLRTPFAK-QATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPE-APNIAREIVLGTGMNVH 81 (428)
T ss_pred CCeEEEEecccCCccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCC-ccHHHHHHHHHCCCCCC
Confidence 4689999999999998 578899999999999999999999999999999999999876544 57889999999999767
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccC-------------CChh--------hhh--
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ-------------VNPK--------VEI-- 184 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~-------------~~~~--------~~~-- 184 (461)
+|+++|+++|+||++|+..|++.|++|++|++|++|+|+||+.|+..... +... +..
T Consensus 82 ~P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (428)
T PRK08963 82 TDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLL 161 (428)
T ss_pred CcceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhcc
Confidence 99999999999999999999999999999999999999999877421100 0000 000
Q ss_pred --hhc--ccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeecc
Q 012522 185 --FTQ--ARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVD 260 (461)
Q Consensus 185 --~~~--~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~d 260 (461)
.+. +..+...|++++++|+++||+|||++|+|++++|+||.+|.+.|+|++||+|+.++ |+ ..+++.|
T Consensus 162 ~~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~---p~-----a~~~~~D 233 (428)
T PRK08963 162 PVPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVP---PY-----KQPLEED 233 (428)
T ss_pred ccCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEec---CC-----ceeeCCC
Confidence 010 01112469999999999999999999999999999999999999999999999863 11 1268999
Q ss_pred CCCCCCCCHHHHhccCCCCCC-CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC-CCCCcHHH
Q 012522 261 DGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS-VMGIGPAV 338 (461)
Q Consensus 261 e~~r~~~t~e~l~~~~pvf~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-~~~~~~~~ 338 (461)
|.+|+++|+|++.+++|+|+| +|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++....++. .+..++..
T Consensus 234 ~~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~~ 313 (428)
T PRK08963 234 NNIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQDMLLGPAY 313 (428)
T ss_pred CCCCCCCCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCchhhhhhHHHH
Confidence 999999999999999999986 7999999999999999999999999999999999999999988765553 34566778
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcC-----------------CCCCCcCCCCCcccccCchhhHHHHH
Q 012522 339 AIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLG-----------------LDPEKVNVNGGAVALGHPLGATGARC 401 (461)
Q Consensus 339 ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LG-----------------l~~~~vn~~GG~~~~Ghp~gatG~~~ 401 (461)
+++++|+++|++++|||++|+||+|+++++.++|.|+ ++.+|||++||++++|||.|+||+++
T Consensus 314 a~~~al~~AGl~~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gasG~~~ 393 (428)
T PRK08963 314 ATPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARM 393 (428)
T ss_pred HHHHHHHHcCCCHHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHH
Confidence 9999999999999999999999999999999999994 56669999999999999999999999
Q ss_pred HHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEEc
Q 012522 402 VATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 402 ~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
++++++|||++ ++++||+++|+|||+|.|+|||++
T Consensus 394 ~~e~~~qLrg~--~g~~gl~~~c~ggG~g~a~~ie~~ 428 (428)
T PRK08963 394 ITQTLHELRRR--GGGLGLTTACAAGGLGAAMVLEVE 428 (428)
T ss_pred HHHHHHHHhhc--CCCEEEEEEccccChhhEEEEEeC
Confidence 99999999998 889999999999999999999985
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-69 Score=554.17 Aligned_cols=379 Identities=37% Similarity=0.518 Sum_probs=336.0
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
.++|+|||++||||+| ++|.+++.++.||+.+|+++||+++||+|++||.|++|++.+++. +.+..+..++.+|+|.+
T Consensus 6 ~~~V~Ivg~~rTpf~k-~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~-~~~~~~~~~l~ag~~~~ 83 (397)
T PRK06954 6 QDPIVIASAARTPMAA-FQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQ-GQAPARQAALGAGLPLS 83 (397)
T ss_pred CCCEEEEecccCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCcc-chHHHHHHHHcCCCCCC
Confidence 4589999999999998 578899999999999999999999999999999999999887655 66777888888999877
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccc--c---ccCCC--hhhh---hhh-cc-cccCccH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS--V---VGQVN--PKVE---IFT-QA-RDCLLPM 195 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~--~---~~~~~--~~~~---~~~-~~-~~~~~~~ 195 (461)
+|+++|+++|+||+.++..|+++|++|.+|++|++|+|+||+.|+. . +..+. ..+. ..+ .. ......|
T Consensus 84 ~p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (397)
T PRK06954 84 VGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLM 163 (397)
T ss_pred ccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCCCH
Confidence 9999999999999999999999999999999999999999976641 1 10111 0011 011 11 1123479
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhcc
Q 012522 196 GITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKL 275 (461)
Q Consensus 196 g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~ 275 (461)
++++++|+++||+|||++|+||+++|+||.++...++|++||.|+++..+. ...+++.||++| .+++|.+.++
T Consensus 164 ~~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~------~~~~v~~D~~pr-~~~~~~l~~l 236 (397)
T PRK06954 164 GTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKK------GDTVIDRDEQPF-KANPEKIPTL 236 (397)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCC------CCeEeccCCCcC-CCCHHHHhCC
Confidence 999999999999999999999999999999876677999999999864321 124699999999 5999999999
Q ss_pred CCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCcc
Q 012522 276 KPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIN 355 (461)
Q Consensus 276 ~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID 355 (461)
+|+|+|+|++|.+|||+++|||+|+||++++.|++++.+|++++.++......|..+..++..+++++|+++||+++|||
T Consensus 237 ~~~f~~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Did 316 (397)
T PRK06954 237 KPAFSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTAPVGAIRKLFEKNGWRAAEVD 316 (397)
T ss_pred CCccCCCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCcccccchHHHHHHHHHHHcCCCHHHCC
Confidence 99999999999999999999999999999999999999999899998877667777777889999999999999999999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEE
Q 012522 356 LFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVF 435 (461)
Q Consensus 356 ~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~ 435 (461)
+||+||+|+++++.++|.|||++.|||++||++++|||+|+||+++++++++||+++ +++++|+++|+|||+|.|+||
T Consensus 317 ~~ei~d~fa~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~--~g~~~v~~~c~~gg~g~a~~~ 394 (397)
T PRK06954 317 LFEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRAR--GGKRGVASLCIGGGEATAMGI 394 (397)
T ss_pred EEehhhHHHHHHHHHHHHhCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhc--CCCeEEEEEccccchhhEEEE
Confidence 999999999999999999999999999999999999999999999999999999999 889999999999999999999
Q ss_pred EE
Q 012522 436 ER 437 (461)
Q Consensus 436 ~~ 437 (461)
|+
T Consensus 395 e~ 396 (397)
T PRK06954 395 EL 396 (397)
T ss_pred Ee
Confidence 97
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-69 Score=554.46 Aligned_cols=372 Identities=32% Similarity=0.528 Sum_probs=324.2
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
|++|||||++||||+| +.|+|++.++.||+.+|++++|+++|+++++||.+++|++.+... ..+.++.+++..|++..
T Consensus 6 m~~V~Ivg~~rTpfg~-~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~-~~~~~r~~~l~~gl~~~ 83 (427)
T PRK09268 6 VRRVAILGGNRIPFAR-SNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSR-DFNLTRECVLGSALSPY 83 (427)
T ss_pred CCCEEEEecCcCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCc-cccHHHHHHHHcCCCCC
Confidence 6789999999999998 578899999999999999999999999999999999999886443 46789998888888767
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccC-------------CChh------h--h---
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ-------------VNPK------V--E--- 183 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~-------------~~~~------~--~--- 183 (461)
+|.++|+++|+||+.++..|++.|++|.+|++|++|+|+||+.|...... +... + .
T Consensus 84 ~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (427)
T PRK09268 84 TPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLA 163 (427)
T ss_pred CceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCccccccccccccccc
Confidence 99999999999999999999999999999999999999999876421100 0000 0 0
Q ss_pred -hhhccc--ccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeecc
Q 012522 184 -IFTQAR--DCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVD 260 (461)
Q Consensus 184 -~~~~~~--~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~d 260 (461)
..+... .....|+.++++|+++||+|||+||+|++++|+||.++++.|+|++||.|+. -++.|
T Consensus 164 ~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~--------------~~~~D 229 (427)
T PRK09268 164 PEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFL--------------GLTRD 229 (427)
T ss_pred ccCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCcc--------------CcccC
Confidence 001111 1134599999999999999999999999999999999999999999999973 17789
Q ss_pred CCCCCCCCHHHHhccCCCCCC--CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCC----CCCCC
Q 012522 261 DGIRPNTTIADLAKLKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP----SVMGI 334 (461)
Q Consensus 261 e~~r~~~t~e~l~~~~pvf~~--~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p----~~~~~ 334 (461)
+++|+++|+|++.++||+|+| +|++|.+|||+++|||+|+||++++.|++++.+|+.++........++ ..+..
T Consensus 230 ~~~r~~~t~e~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~ 309 (427)
T PRK09268 230 NNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKEGLLM 309 (427)
T ss_pred CCCCCCCCHHHHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccccchhhc
Confidence 999999999999999999998 799999999999999999999999999999999976664444444443 34566
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHH---HHcCCC--------------CCCcCCCCCcccccCchhhH
Q 012522 335 GPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCI---KKLGLD--------------PEKVNVNGGAVALGHPLGAT 397 (461)
Q Consensus 335 ~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~---e~LGl~--------------~~~vn~~GG~~~~Ghp~gat 397 (461)
++..+++++|+++|++++|||++|+||+|+++.+..+ |.|||| ..|||++||.+++|||.|||
T Consensus 310 ~~~~a~~~a~~~AGl~~~Did~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gAT 389 (427)
T PRK09268 310 APAYAVPRLLARNGLTLQDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAAT 389 (427)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEeccccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccc
Confidence 7788999999999999999999999999999976666 888886 35899999999999999999
Q ss_pred HHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 398 GARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 398 G~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+++++|+++||+++ +.++||+++|+|||+|.|+|||+
T Consensus 390 G~~~v~e~~~QL~~~--~~~~gl~~~c~~gG~g~a~~~e~ 427 (427)
T PRK09268 390 GGRIVATLAKLLAEK--GSGRGLISICAAGGQGVTAILER 427 (427)
T ss_pred hHHHHHHHHHHHHhc--CCCEEEEEEcccCchheEEEEeC
Confidence 999999999999999 89999999999999999999985
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-69 Score=552.88 Aligned_cols=379 Identities=35% Similarity=0.551 Sum_probs=335.2
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
.++|||||++||||+| +.|.+++.++.+|+.++++++|++++|++++||.+++|++.+... +.++++.+++..|+|..
T Consensus 6 ~~~V~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~-~~~~ar~~~l~aGl~~~ 83 (430)
T TIGR02446 6 GERIAIVAGLRTPFAR-QATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPE-APNIAREIVLGTGMNVH 83 (430)
T ss_pred CCCEEEEecccCcccc-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCc-cchHHHHHHHhCCCCCC
Confidence 6799999999999998 578899999999999999999999999999999999999876554 57899999999999878
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccccc-------C------CChh--------hhh-h
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-------Q------VNPK--------VEI-F 185 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~-------~------~~~~--------~~~-~ 185 (461)
+|+++|+++|+||+.|+..|++.|++|++|++|++|+|+||+.|+.... . .... +.. .
T Consensus 84 ~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (430)
T TIGR02446 84 TDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLM 163 (430)
T ss_pred CchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhhc
Confidence 9999999999999999999999999999999999999999987642110 0 0000 000 0
Q ss_pred hcc-----cccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeecc
Q 012522 186 TQA-----RDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVD 260 (461)
Q Consensus 186 ~~~-----~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~d 260 (461)
+.. +.+...|++++++|+++||+|||+||+|++++|+||.++++.|+|++||+|+... |+ ..+++.|
T Consensus 164 ~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~n---p~-----a~~~~~D 235 (430)
T TIGR02446 164 PVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPP---PY-----KQWIAED 235 (430)
T ss_pred ccCcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeec---CC-----ceEeccc
Confidence 000 0012369999999999999999999999999999999999999999999998642 21 1468999
Q ss_pred CCCCCCCCHHHHhccCCCCCC-CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCC-CCCCCcHHH
Q 012522 261 DGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAV 338 (461)
Q Consensus 261 e~~r~~~t~e~l~~~~pvf~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-~~~~~~~~~ 338 (461)
|.+|+++|+|++.+++|+|+| .|++|.+|||+++|||+|+||++++.|++++.+|.++|.+++....++ ..+..++..
T Consensus 236 ~~~r~~~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~ 315 (430)
T TIGR02446 236 NNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDMLMGPSY 315 (430)
T ss_pred CCCCCCCCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHhhcccHHH
Confidence 999999999999999999998 689999999999999999999999999999999989999998876666 346677789
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcC-----------------CCCCCcCCCCCcccccCchhhHHHHH
Q 012522 339 AIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLG-----------------LDPEKVNVNGGAVALGHPLGATGARC 401 (461)
Q Consensus 339 ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LG-----------------l~~~~vn~~GG~~~~Ghp~gatG~~~ 401 (461)
+++++|+++|++++|||++|+||+|+++++.++|.|| ++.+|||++||++++|||.|+||+++
T Consensus 316 a~~~al~~Agl~~~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gatG~~~ 395 (430)
T TIGR02446 316 ATPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARM 395 (430)
T ss_pred HHHHHHHHcCCCHHHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHH
Confidence 9999999999999999999999999999999999997 56669999999999999999999999
Q ss_pred HHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEEc
Q 012522 402 VATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 402 ~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
++|+++||+++ ..++++..+|++||+|.++++|++
T Consensus 396 v~e~~~qL~g~--ag~~g~~~~~~~GG~g~a~iie~~ 430 (430)
T TIGR02446 396 ITQTLRELKRR--GGGLGLNTACAAGGLGAAMILEVE 430 (430)
T ss_pred HHHHHHHHhhc--CCCccEEEEEecCcceEEEEEEeC
Confidence 99999999998 788999999999999999999974
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-68 Score=547.32 Aligned_cols=381 Identities=48% Similarity=0.704 Sum_probs=337.7
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
++|+|||+++|||+| +.|.+++.++.+|+.+|+++||+|+||+++|||.+++|++.+... ++++++.++..+|++...
T Consensus 2 ~~v~IvG~~~tp~~r-~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~-~~~~~~~~~~~~gl~~~~ 79 (393)
T PRK05790 2 KDVVIVSAARTPIGK-FGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGA-GQNPARQAALKAGLPVEV 79 (393)
T ss_pred CceEEEeeecCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCC-CCcHHHHHHHHcCCCCCC
Confidence 589999999999998 567888999999999999999999999999999999999876543 566777788889996568
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc-----ccCCCh--hhh----hhhcccccCccHHH
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQVNP--KVE----IFTQARDCLLPMGI 197 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~-----~~~~~~--~~~----~~~~~~~~~~~~g~ 197 (461)
|.++++.+|+|++.+|..|+++|++|.+|++|++|+|+||+.|..+ +..+.. ... ..+.+......|++
T Consensus 80 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 159 (393)
T PRK05790 80 PALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGI 159 (393)
T ss_pred ceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHH
Confidence 9999999999999999999999999999999999999999876421 111111 001 00111112347999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCC
Q 012522 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (461)
Q Consensus 198 ~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~p 277 (461)
.+++|+++||+|||++++|++++|+||.+||++|+|++||+|+....+ ..+..+++.|+.+|.+++.|++..++|
T Consensus 160 ~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~-----~~~~~~~~~d~~~~~~~~~e~l~~~~~ 234 (393)
T PRK05790 160 TAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQR-----KGDPVVVDTDEHPRPDTTAESLAKLRP 234 (393)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCC-----CCCceEecCCCCCCCCCCHHHHhCCCC
Confidence 999999999999999999999999999999999999999999976432 112356899999999999999999999
Q ss_pred CCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 278 vf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
+|+|.|++|.+|||+++|||+|+||++++.+++++.+|+++|.+++.....|..+..++..+++++|+++|++++|||++
T Consensus 235 v~~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~ 314 (393)
T PRK05790 235 AFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRKALEKAGWSLADLDLI 314 (393)
T ss_pred ccCCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCCccchhHHHHHHHHHHHcCCCHHHCCEE
Confidence 99998999999999999999999999999999999999999999999887777666777899999999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 358 EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 358 eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+||+|+++.+.++|.||+|+.|||++||++++|||.|+||+++++++++|||++ +.++||+++|+|+|+|.++|||+
T Consensus 315 e~~d~f~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~--~~~~gl~~~~~~~g~g~~~~~e~ 392 (393)
T PRK05790 315 EINEAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRR--GAKKGLATLCIGGGQGVALIVER 392 (393)
T ss_pred EeCcHHHHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhc--CCCeEEEEEeccCCceeEEEEEc
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999999999999997
Q ss_pred c
Q 012522 438 G 438 (461)
Q Consensus 438 ~ 438 (461)
.
T Consensus 393 ~ 393 (393)
T PRK05790 393 P 393 (393)
T ss_pred C
Confidence 4
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-68 Score=552.20 Aligned_cols=375 Identities=39% Similarity=0.637 Sum_probs=328.5
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
+++|+|||++||||+| +.|.+++.++.+|+.+|+++||+++||++++||.|++|+..+... .++.++.++..+|++.+
T Consensus 2 ~~~v~Ivg~~rTp~g~-~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~-~~~~a~~v~~~lGl~~~ 79 (426)
T PRK08170 2 ARPVYIVDGARTPFLK-ARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPD-EANIARVVALRLGCGEK 79 (426)
T ss_pred CCcEEEEecCCCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-cChHHHHHHHHhCcCCC
Confidence 4689999999999998 567777899999999999999999999999999999998875443 45788899999999766
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccc--cc-----c----------CCC------hhhhh
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS--VV-----G----------QVN------PKVEI 184 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~--~~-----~----------~~~------~~~~~ 184 (461)
+|.++++++|+|++++|..|+++|++|.+|++|++|+|+||+.|+. .+ . .+. ..+.
T Consensus 80 ~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 158 (426)
T PRK08170 80 VPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYL- 158 (426)
T ss_pred ceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCcccccccccccccc-
Confidence 8999999999999999999999999999999999999999986531 10 0 000 0010
Q ss_pred hh-----cc-cccC--ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCccccee
Q 012522 185 FT-----QA-RDCL--LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVT 256 (461)
Q Consensus 185 ~~-----~~-~~~~--~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~ 256 (461)
.| .+ .+++ ..|++.+++|+++||+|||++|+|++++|+||.++.+.|+|+ ||+|++.+ ++ ..
T Consensus 159 ~~~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~-~i~pv~~~-----~~----np 228 (426)
T PRK08170 159 APVIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVPLFDR-----DG----KF 228 (426)
T ss_pred ccccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcc-eEeeeecC-----CC----Ce
Confidence 01 01 1222 479999999999999999999999999999999988889998 99999721 11 25
Q ss_pred eeccCCCCCCCCHHHHhccCCCCC-CCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCc
Q 012522 257 ISVDDGIRPNTTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIG 335 (461)
Q Consensus 257 v~~de~~r~~~t~e~l~~~~pvf~-~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~ 335 (461)
+..||.+|+++|+|++.++||+|+ |.+++|.+|||+++|||+|+||++++.|++++.+|.+++.++.....+|..++.+
T Consensus 229 ~a~de~~r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~~~~~~ 308 (426)
T PRK08170 229 YDHDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPSQMGLG 308 (426)
T ss_pred eccCCCCCCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCchhhccc
Confidence 788999999999999999999998 6899999999999999999999999999999999998999998888888878788
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHH---HcCCC--------------CCCcCCCCCcccccCchhhHH
Q 012522 336 PAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIK---KLGLD--------------PEKVNVNGGAVALGHPLGATG 398 (461)
Q Consensus 336 ~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e---~LGl~--------------~~~vn~~GG~~~~Ghp~gatG 398 (461)
+..+++++|+++||+++|||++|+||+|+++++.+++ .|||| ..|||++||.+++|||.||||
T Consensus 309 ~~~a~~~al~~aGl~~~did~~ei~daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG 388 (426)
T PRK08170 309 PVHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASG 388 (426)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecchhHHHHHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccCcc
Confidence 8899999999999999999999999999999997665 55554 359999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 399 ARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 399 ~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
++++.++++||++. +.++|++++|+|||+|.|+|||+
T Consensus 389 ~~~~~~l~~~l~~~--~~~~g~~~~c~~gg~g~a~~~e~ 425 (426)
T PRK08170 389 ARIVLHLLHALKRR--GTKRGIAAICIGGGQGGAMLLER 425 (426)
T ss_pred HHHHHHHHHHHHhh--CCCeEEEEEecCCChhheEEEEe
Confidence 99999999999998 89999999999999999999997
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-66 Score=523.51 Aligned_cols=359 Identities=38% Similarity=0.599 Sum_probs=325.7
Q ss_pred cEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC
Q 012522 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP 129 (461)
Q Consensus 50 ~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~ 129 (461)
+|+|||++||||+| +.|.+++.++.+|+..+++++++ |++ ++||.|++|++.+. +.+.+|.+++.+|++..+|
T Consensus 2 ~v~Ivg~~rTpfg~-~~g~~~~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~---~~~~~r~~~~~~Gl~~~~p 74 (361)
T PRK06690 2 RAVIVEAKRTPIGK-KNGMLKDYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP---GGNVARLSALEAGLGLHIP 74 (361)
T ss_pred cEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC---cchHHHHHHHHcCCCCCCC
Confidence 69999999999998 68999999999999999999855 896 89999999998654 3667888999999986899
Q ss_pred eEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCC
Q 012522 130 LRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVT 209 (461)
Q Consensus 130 ~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~s 209 (461)
.++|+++|+||+.++..|++.|++|++|++|++|+|+||+.|+.....+.. . ......|++++++|+++||+|
T Consensus 75 ~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~------~-~~~~~~~~~~a~~~~~~ygit 147 (361)
T PRK06690 75 GVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSP------E-TIGDPDMGVAAEYVAERYNIT 147 (361)
T ss_pred ceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCc------c-cccCccHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999876421111110 0 011124999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHH-hccCCCCCCCCccccC
Q 012522 210 RQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL-AKLKPAFKKDGTTTAG 288 (461)
Q Consensus 210 re~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l-~~~~pvf~~~g~lt~~ 288 (461)
||+||+||..+|+|+.++++.++|++||+|++. ++ ||.+|+.+|+|++ .+++|+|+|+|++|.+
T Consensus 148 re~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~--------------~~-d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~ 212 (361)
T PRK06690 148 REMQDEYACLSYKRTLQALEKGYIHEEILSFNG--------------LL-DESIKKEMNYERIIKRTKPAFLHNGTVTAG 212 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCceecccC--------------cc-ccccCCCCCHHHHhhcCCCcccCCCceecc
Confidence 999999999999999999999999999999861 45 8999999999999 7779999999999999
Q ss_pred CCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHH
Q 012522 289 NASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYV 368 (461)
Q Consensus 289 ~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~ 368 (461)
|||+++|||+|+||++++.|++++.+|++++.+++..+.++..+..++..+++++|+++|++++|||+||+||+|+.+.+
T Consensus 213 ~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~~~~ 292 (361)
T PRK06690 213 NSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASKVV 292 (361)
T ss_pred ccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEeccCcccchhHHHHHHHHHHHHcCCCHHHcCEeeecchhHHHHH
Confidence 99999999999999999999999999988999988877777777778889999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEEcc
Q 012522 369 YCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 369 ~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
+++|.||+++.|+|++||++++|||.|+||+++++++++||+++ +.++|++++|+|||+|.|+|||+.+
T Consensus 293 ~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~--~~~~g~~~~c~~gG~g~a~~~e~~~ 361 (361)
T PRK06690 293 ACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKRE--DMKYGIATLGIGGGIGLALLFEKVE 361 (361)
T ss_pred HHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHh--CCCEEEEEEcccCcceeEEEEEecC
Confidence 99999999999999999999999999999999999999999998 8999999999999999999999853
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-65 Score=524.89 Aligned_cols=375 Identities=54% Similarity=0.815 Sum_probs=334.8
Q ss_pred EEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeE
Q 012522 52 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR 131 (461)
Q Consensus 52 ~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~ 131 (461)
+|||++||||+| +.+.+++.++.+|+.+|+++||+++|++++|||.+++++..++.. ++..++.++..+|++.+.|++
T Consensus 1 ~Ivg~~~Tpf~r-~~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~-~~~~a~~v~~~lGl~~~~~~~ 78 (386)
T cd00751 1 VIVSAVRTPIGR-FGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGE-GQNPARQAALLAGLPESVPAT 78 (386)
T ss_pred CEEEeecCCccC-CCCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCCchh
Confidence 599999999998 457788899999999999999999999999999999998877665 677788899999996457999
Q ss_pred EeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccC----C-Ch---hhhhhhcc---cccCccHHHHHH
Q 012522 132 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ----V-NP---KVEIFTQA---RDCLLPMGITSE 200 (461)
Q Consensus 132 ~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~----~-~~---~~~~~~~~---~~~~~~~g~~a~ 200 (461)
+|+.+|+|++.+|..|+++|++|.+|+||++|+|+||+.+...... . .. .+. .+.. +.....|++.++
T Consensus 79 ~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~a~ 157 (386)
T cd00751 79 TVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGM-LDDGLTDPFTGLSMGITAE 157 (386)
T ss_pred hhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccc-cccccccccCCCCHHHHHH
Confidence 9999999999999999999999999999999999998866422111 1 10 111 1111 112456899999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCC
Q 012522 201 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280 (461)
Q Consensus 201 ~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~ 280 (461)
+|+++||+|||++|+|++++|+||..|++.+.+.++|.|+..+.+ +++.++++|+.+|+++|+|++++++|+|+
T Consensus 158 ~~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~------~~~~~~~~~a~~r~~~t~e~v~~s~~i~~ 231 (386)
T cd00751 158 NVAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGR------KGPVVVDRDEGPRPDTTLEKLAKLKPAFK 231 (386)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccC------CCCeEeCCCCCCCCCCCHHHHhCCCCCcC
Confidence 999999999999999999999999999999999999999986432 23467889999999999999999999999
Q ss_pred CCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEec
Q 012522 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360 (461)
Q Consensus 281 ~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eih 360 (461)
|.|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++....++..+..++..+++++|+++|++++|||++|+|
T Consensus 232 p~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~ 311 (386)
T cd00751 232 KDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALKRAGLTLDDIDLIEIN 311 (386)
T ss_pred CCCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEee
Confidence 99999999999999999999999999999999999999999998877776667778899999999999999999999999
Q ss_pred CCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 361 EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 361 eafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+|++..++++|.||+++.|+|++||++++|||.|+||+++++++++||+++ +.++||+++|++||+|.++|||+
T Consensus 312 d~f~~~~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~--~~~~gl~~~~~~gg~g~~~~ie~ 386 (386)
T cd00751 312 EAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRR--GGRYGLATMCIGGGQGAAMVIER 386 (386)
T ss_pred chhHHHHHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhc--CCCEEEEEEcccccceEEEEEEC
Confidence 9999999999999999999999999999999999999999999999999999 99999999999999999999985
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-65 Score=525.94 Aligned_cols=377 Identities=42% Similarity=0.624 Sum_probs=334.1
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHc-CCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~a-gl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
++|+|||++||||+|...|.|++.++.||+.+|+++||+|+ ||+++|||.+++|+..+...++++.++.++..+|++ .
T Consensus 2 ~~v~IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~ 80 (406)
T PRK07851 2 PEAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-F 80 (406)
T ss_pred CcEEEEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-C
Confidence 48999999999999855788999999999999999999997 999999999999987654333567788999999995 5
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccC--------CC--------------hhhhhh
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ--------VN--------------PKVEIF 185 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~--------~~--------------~~~~~~ 185 (461)
.|.++|+++|+||+.++..|++.|++|.+|++||+|+|+||..+...... +. +.|..
T Consensus 81 ~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 159 (406)
T PRK07851 81 LPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHD- 159 (406)
T ss_pred CCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhcccccccccccccccccc-
Confidence 89999999999999999999999999999999999999998765210000 00 01111
Q ss_pred hc----ccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccC
Q 012522 186 TQ----ARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDD 261 (461)
Q Consensus 186 ~~----~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de 261 (461)
+. .+..+..|+.++++|+++||++||+|++|++++|++|..+.+.+.|..+|+|+.++.. ..+++|+
T Consensus 160 ~~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~---------~~~~~d~ 230 (406)
T PRK07851 160 PREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDG---------TVVSTDD 230 (406)
T ss_pred cccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCC---------ceeCCCC
Confidence 11 1122456799999999999999999999999999999999999889999999876421 3578899
Q ss_pred CCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHH
Q 012522 262 GIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIP 341 (461)
Q Consensus 262 ~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~ 341 (461)
.+|+++|+|++.+++|+|+|+|.+|.+|||+++|||+|+||++++.|++++.+|+++|.+++.....|..+..++..+++
T Consensus 231 ~~r~~~t~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~ 310 (406)
T PRK07851 231 GPRAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSPEIMGLGPVEASK 310 (406)
T ss_pred CccCCcCHHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCCCccchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999877767666667889999
Q ss_pred HHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEE
Q 012522 342 AAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVI 421 (461)
Q Consensus 342 ~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~ 421 (461)
++|+++|++++|||++|+||+|+++++..+|.|||++.|+|++||++++|||.|+||+++++++++||+++ ++++||+
T Consensus 311 ~al~~Agi~~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~--~~~~g~~ 388 (406)
T PRK07851 311 QALARAGMSIDDIDLVEINEAFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTH--DKTFGLE 388 (406)
T ss_pred HHHHHhCCCHHHCCeehhhhHHHHHHHHHHHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhc--CCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988 8999999
Q ss_pred EecccCcceeEEEEEEc
Q 012522 422 SMCIGSGMGAAAVFERG 438 (461)
Q Consensus 422 ~~~~g~G~g~A~v~~~~ 438 (461)
++|+|||+|.|+|||+.
T Consensus 389 ~~~~~gg~g~a~~~e~~ 405 (406)
T PRK07851 389 TMCVGGGQGMAMVLERL 405 (406)
T ss_pred EEccccChhhEEEEEec
Confidence 99999999999999974
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-64 Score=518.81 Aligned_cols=381 Identities=36% Similarity=0.557 Sum_probs=331.6
Q ss_pred cEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC
Q 012522 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP 129 (461)
Q Consensus 50 ~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~ 129 (461)
+|+|||++||||+| +.|.+++.++.+|+.+++++||+|+||++++||.+++|++..... +++.++.++..+|++.+.|
T Consensus 2 ~v~IvG~~~Tp~g~-~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~-~~~~~~~~~~~~Gl~~~~p 79 (394)
T PLN02644 2 DVCIVGVARTPIGG-FLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANL-GQAPARQAALGAGLPPSTI 79 (394)
T ss_pred cEEEEeeccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCc-CCcHHHHHHHhcCCCCCCc
Confidence 69999999999998 567888999999999999999999999999999999998765443 5567788999999976789
Q ss_pred eEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc-----ccCCCh-----hhhhhh-cccccCccHHHH
Q 012522 130 LRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQVNP-----KVEIFT-QARDCLLPMGIT 198 (461)
Q Consensus 130 ~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~-----~~~~~~-----~~~~~~-~~~~~~~~~g~~ 198 (461)
+++|+++|+|++.++..|++.|++|++|++|++|+|+||+.|... +..+.. .+...+ ..+.....|++.
T Consensus 80 ~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (394)
T PLN02644 80 CTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVC 159 (394)
T ss_pred eEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHH
Confidence 999999999999999999999999999999999999999765311 111100 010011 011123358999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCC
Q 012522 199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278 (461)
Q Consensus 199 a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pv 278 (461)
+++|+++||+|||++|+|++++|+|+.+|++.++|+.||.|+++..+. ..+..+++.||.+| ..+.+.|..++|+
T Consensus 160 A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~----~~~~~~~~~de~~~-~~~~~~l~~l~p~ 234 (394)
T PLN02644 160 AELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGR----GRPSVIVDKDEGLG-KFDPAKLRKLRPS 234 (394)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCC----CCCceEeecCCCcC-CCCHHHHhCCCCc
Confidence 999999999999999999999999999999999999999999864211 01123478899997 7899999999999
Q ss_pred CCC-CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 279 FKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 279 f~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
|++ +|.+|.+|||+++|||+++||++++.|++++.+|+++|.+++.....+..+..++..+++++|+++|++++|||++
T Consensus 235 f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~Did~~ 314 (394)
T PLN02644 235 FKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKALKHAGLEASQVDYY 314 (394)
T ss_pred ccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHCCEE
Confidence 987 6999999999999999999999999999999999899999988766665566677889999999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 358 EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 358 eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+||+|+.+.+.++|.||+|+.|+|++||++++|||.|+||+++++++++||+++ +++++++++|+|||+|.|+|||+
T Consensus 315 Ei~d~f~~~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~--~~~~g~~~~~~~gg~g~a~~~e~ 392 (394)
T PLN02644 315 EINEAFSVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSK--NGKYGVAGICNGGGGASAIVVEL 392 (394)
T ss_pred EeCcHHHHHHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhc--CCCeEEEEEeccCCceeEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999998 88999999999999999999998
Q ss_pred cc
Q 012522 438 GD 439 (461)
Q Consensus 438 ~~ 439 (461)
.+
T Consensus 393 ~~ 394 (394)
T PLN02644 393 MQ 394 (394)
T ss_pred cC
Confidence 53
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-64 Score=516.46 Aligned_cols=368 Identities=40% Similarity=0.600 Sum_probs=319.2
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
++|+|||+++|||+| +.|++++.++.+|+.+|+++||+|+||+++|||.+++|+......+..+.++...+..|++...
T Consensus 2 ~~v~Ivg~~~Tpf~~-~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~ 80 (382)
T PRK07801 2 AEAYIVDAVRTPVGK-RKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEV 80 (382)
T ss_pred CceEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCC
Confidence 589999999999998 5677888999999999999999999999999999999976332221355777777788887668
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccc----cccCCC--------hhhhhhhcccccCccHH
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS----VVGQVN--------PKVEIFTQARDCLLPMG 196 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~----~~~~~~--------~~~~~~~~~~~~~~~~g 196 (461)
|.++++++|+||+.++..|++.|++|++|++|++|+|+||..|+. .+..+. ..|. .+.+.. ..++.
T Consensus 81 p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~-~~~~~ 158 (382)
T PRK07801 81 PGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWL-HRYGDQ-EVSQF 158 (382)
T ss_pred ceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchh-hhccCC-CCCHH
Confidence 999999999999999999999999999999999999999876531 110010 1111 121211 23455
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccC
Q 012522 197 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK 276 (461)
Q Consensus 197 ~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~ 276 (461)
..+++|+++||+|||++|+|++++|+||..||.+|+|.++++|+.. +..||++| .+|+|++.++|
T Consensus 159 ~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~--------------~~~d~~~~-~~t~e~~~~~~ 223 (382)
T PRK07801 159 RGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGG--------------VTVDEGPR-ETSLEKMAGLK 223 (382)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccC--------------ccccCCcC-cCCHHHHhcCC
Confidence 5799999999999999999999999999999999999999888763 56789998 69999999999
Q ss_pred CCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccE
Q 012522 277 PAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINL 356 (461)
Q Consensus 277 pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~ 356 (461)
|++++ +++|.+|||+++|||+|+||++++.|++++.+|.++|.++......+..+..++..+++++|+++|++++|||+
T Consensus 224 ~i~~~-~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agi~~~did~ 302 (382)
T PRK07801 224 PLVEG-GRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRYALEKTGLSIDDIDV 302 (382)
T ss_pred CCCCC-CCcccccCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHhhccChHHHHHHHHHHcCCCHHHcCE
Confidence 99943 67999999999999999999999999999988888999987766555445667788999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEE
Q 012522 357 FEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436 (461)
Q Consensus 357 ~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~ 436 (461)
+|+||+|+++++.++|.||||++|||++||.+++|||.||||+++++++++||+++ +.++|+++.|+|||++.+++|+
T Consensus 303 ~e~~d~Fa~~~~~~~e~lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~--~~~~gl~~~~gggg~~~~~vl~ 380 (382)
T PRK07801 303 VEINEAFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERT--GGRYGLQTMCEGGGTANVTIIE 380 (382)
T ss_pred eeecccchHHHHHHHHHhCCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhc--CCCEEEEEEcccccceeEEEEE
Confidence 99999999999999999999999999999999999999999999999999999998 8999999999999999999998
Q ss_pred E
Q 012522 437 R 437 (461)
Q Consensus 437 ~ 437 (461)
+
T Consensus 381 ~ 381 (382)
T PRK07801 381 R 381 (382)
T ss_pred e
Confidence 6
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-64 Score=514.51 Aligned_cols=373 Identities=53% Similarity=0.799 Sum_probs=330.4
Q ss_pred EEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEE
Q 012522 53 IVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRT 132 (461)
Q Consensus 53 Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~ 132 (461)
|||+++|||+| +.|++++.+..+|+.+|+++||+|+|++++|||.+++++.+++.. .+..++.++..+|++.+.|+++
T Consensus 1 IvG~~~tp~~~-~~g~~~~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~-~~~~a~~va~~lGl~~~~~~~~ 78 (386)
T TIGR01930 1 IVAAARTPIGK-FGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGE-QQNIARQAALLAGLPESVPAYT 78 (386)
T ss_pred CcceecCCccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCceeee
Confidence 78999999998 567788999999999999999999999999999999998876654 4667888999999965589999
Q ss_pred eCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccc------cCCCh----hhhhhhccc-c--cCccHHHHH
Q 012522 133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV------GQVNP----KVEIFTQAR-D--CLLPMGITS 199 (461)
Q Consensus 133 v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~------~~~~~----~~~~~~~~~-~--~~~~~g~~a 199 (461)
++++|+|++.+|..|+++|++|.+|++|++|+|++|+.+.... ..+.. .|. .+... . ....|++.+
T Consensus 79 v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~a~~a 157 (386)
T TIGR01930 79 VNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQI-LKDGLTDPLNGLSMGLTA 157 (386)
T ss_pred ecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhh-cCccccccccCCCHHHHH
Confidence 9999999999999999999999999999999999987653210 01110 111 11111 1 135699999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCC
Q 012522 200 ENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF 279 (461)
Q Consensus 200 ~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf 279 (461)
++|+++||+|||++++|++++|+||..|+++|.|++||+|+.+..+ +++.+++.|+.+|+++|+|++++++|++
T Consensus 158 ~~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~------~~~~~~~~da~~r~~~t~e~v~~s~~i~ 231 (386)
T TIGR01930 158 ENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGR------KGPVTVSTDEGIRPNTTLEKLAKLKPAF 231 (386)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccC------CCCeEeCCCCCCCCCCCHHHHhCCCCCc
Confidence 9999999999999999999999999999999999999999865321 1236789999999999999999999999
Q ss_pred CCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEe
Q 012522 280 KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI 359 (461)
Q Consensus 280 ~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ei 359 (461)
+|.|.+|.+|||+++|||+|+||++++.|++++.+|+++|.+++.....|..+..+...+++++|+++|++++|||++|+
T Consensus 232 ~P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~ 311 (386)
T TIGR01930 232 DPNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVDPEIMGLGPVPAIPKALKKAGLSISDIDLFEI 311 (386)
T ss_pred CCCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccccHHHHHHHHHHHcCCCHHHCCeeeh
Confidence 98888999999999999999999999999999999999999999887767666667789999999999999999999999
Q ss_pred cCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEE
Q 012522 360 NEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436 (461)
Q Consensus 360 heafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~ 436 (461)
||+|++.+++++|.||+...|+|++||++++|||.|+||+++++++++||+++ +.++||++.|++||+|.++|||
T Consensus 312 ~d~fa~~~~~~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~--~~~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 312 NEAFAAQVLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRR--GGRYGLATICIGGGQGIAVILE 386 (386)
T ss_pred cchhHHHHHHHHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhc--CCCEEEEEEeccCCceEEEEeC
Confidence 99999999999999999888999999999999999999999999999999998 8999999999999999999986
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-57 Score=467.09 Aligned_cols=336 Identities=20% Similarity=0.294 Sum_probs=281.0
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
++|+|||+++|||+| +++.++.+|+.+++++||+++||+++|||.+++|+...+.. .......++..+|++ ..
T Consensus 7 ~~v~IvG~g~tp~~~-----~~~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~-~~~~~~~~a~~lGl~-~~ 79 (398)
T PRK06157 7 DKVAILGMGCTKFGE-----RWDAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIG-SGKSGTPLSRALRLP-NI 79 (398)
T ss_pred CCeEEEEeccccccc-----cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccc-ccchhHHHHHHcCCC-CC
Confidence 689999999999997 35788999999999999999999999999999998754321 112235577799996 48
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccccc-C-CChhhhhhhcccccCccHHHHHHHHHHHh
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-Q-VNPKVEIFTQARDCLLPMGITSENVAQRF 206 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~-~-~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 206 (461)
|.++|+.+|+||+.+|..|++.|++|++|++|++|+|+||..++.... . ....+............+++.+++|+++|
T Consensus 80 ~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~y 159 (398)
T PRK06157 80 PVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAYAAKY 159 (398)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999875542100 0 01111111111122245889999999999
Q ss_pred CCCHHHH----HHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCC
Q 012522 207 GVTRQEQ----DLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD 282 (461)
Q Consensus 207 g~sre~~----~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~ 282 (461)
|+|||++ ++|++++|+||.+||.+ .+|+++|+|++++++|+++|
T Consensus 160 G~t~e~~~~~~a~vav~~~~~A~~np~A-------------------------------~~r~~~t~e~v~~s~~v~~P- 207 (398)
T PRK06157 160 GVSREDLKRAMAHVSVKSHANGARNPKA-------------------------------HLRKAVTEEQVLKAPMIAGP- 207 (398)
T ss_pred CCCHHHHcccccHHHHHHHHHHhcCChh-------------------------------hcCCCCCHHHHhcCCcccCC-
Confidence 9999999 79999999999999876 33567999999999999987
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc----------CCCCCCCcHHHHHHHHHHHcCCC--
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV----------DPSVMGIGPAVAIPAAVKSAGLQ-- 350 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~----------~p~~~~~~~~~ai~~aL~~AGl~-- 350 (461)
++.+|||+++|||+|+||++++.|++++.++.++|.+++.... ++..+. .+..+++++|+++||+
T Consensus 208 --l~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~-~~~~aa~~a~~~AGl~~~ 284 (398)
T PRK06157 208 --LGLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFP-TTRIAARKAYREAGITDP 284 (398)
T ss_pred --CchhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEEEEEecccccccccccccccccH-HHHHHHHHHHHHcCCCCc
Confidence 7888999999999999999999999998755569999876532 222222 2457999999999998
Q ss_pred CCCccEEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCCcccccCchhhHHHHHHHHHHHHHHcc
Q 012522 351 IDDINLFEINEAFASQYVYCIKKLGLDPE------------------KVNVNGGAVALGHPLGATGARCVATLLSEMKRR 412 (461)
Q Consensus 351 ~~DID~~eiheafa~~~~~~~e~LGl~~~------------------~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~ 412 (461)
++|||++|+||+|+++++.++|.||||+. |+|++||.+++|||.|+||+++++|+++|||++
T Consensus 285 ~~Did~~Ei~D~Fs~~~l~~~e~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ 364 (398)
T PRK06157 285 REELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGR 364 (398)
T ss_pred hhcCCEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhccc
Confidence 79999999999999999999999999983 899999999999999999999999999999987
Q ss_pred -----CCCCCEEEEEeccc
Q 012522 413 -----GKDCRFGVISMCIG 426 (461)
Q Consensus 413 -----~~~~~~gl~~~~~g 426 (461)
|++.++++++..+|
T Consensus 365 ag~rQv~~a~~~l~~~~gg 383 (398)
T PRK06157 365 AGERQLKNPRLALTHNLGG 383 (398)
T ss_pred ccCccCCCccEEEEeccCC
Confidence 77899999997655
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-57 Score=469.36 Aligned_cols=349 Identities=20% Similarity=0.238 Sum_probs=292.0
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
+++|+|||+++|||+| + +.+..+|+.+|+++||+++||++++||.|++++..++....+..++.++..+|++ .
T Consensus 3 ~~~v~Ivg~~~t~~~r-~-----~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~ 75 (399)
T PRK06059 3 PEPVYILGAGMHPWGK-W-----GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-G 75 (399)
T ss_pred CCcEEEEEecccccCC-C-----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-C
Confidence 4689999999999997 2 4567999999999999999999999999999887765432344568899999994 5
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccc-cc-ccCC-Chhhhhh-hcccccCccHHHHHHHHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSI-SV-VGQV-NPKVEIF-TQARDCLLPMGITSENVA 203 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~-~~-~~~~-~~~~~~~-~~~~~~~~~~g~~a~~~~ 203 (461)
.++++++.+|+|++.+|.+|+++|++|++|++||+|+|+++...+ .. +... ...|... |.+......|++.+++|+
T Consensus 76 ~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~ 155 (399)
T PRK06059 76 APVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRM 155 (399)
T ss_pred CceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999985211 11 1111 1122211 122222246999999999
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCC
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG 283 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g 283 (461)
++||++||+++.+++++|.+|..||.+ .+|+++|+|++++++|+++|
T Consensus 156 ~~yg~s~e~~a~v~~~~~~~a~~Np~A-------------------------------~~r~~~t~e~v~~s~~i~~P-- 202 (399)
T PRK06059 156 DLYGATVEDFAQVKVKNARHGLLNPNA-------------------------------RYRKEVTVEDVLASPVVSDP-- 202 (399)
T ss_pred HHhCCCHHHHHHHHHHHHHHHccCcHh-------------------------------hcCCCCCHHHHhcCCcccCC--
Confidence 999999999999999999999888766 34667999999999999987
Q ss_pred ccccCCCCcccccceEEEEcchhHHHhc--CCCeeEEEEEeeeecc-CC----CCCCCc--------------HHHHHHH
Q 012522 284 TTTAGNASQVSDGAGAVLLMKRSLAVQK--GLPILGVFRSFSAVGV-DP----SVMGIG--------------PAVAIPA 342 (461)
Q Consensus 284 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~--g~~~~a~i~g~~~~~~-~p----~~~~~~--------------~~~ai~~ 342 (461)
+|.+|||+++|||+|+||++++.|+++ +.++.++|.+++.... .+ ...... ...++++
T Consensus 203 -l~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~ 281 (399)
T PRK06059 203 -LRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDA 281 (399)
T ss_pred -CchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHHH
Confidence 889999999999999999999999999 6666679999887541 11 111111 1367999
Q ss_pred HHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCCcccccCchhhHHHHHHHH
Q 012522 343 AVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPE------------------KVNVNGGAVALGHPLGATGARCVAT 404 (461)
Q Consensus 343 aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~------------------~vn~~GG~~~~Ghp~gatG~~~~~~ 404 (461)
+|+++|++++|||++|+||+|+.+++.++|.||||+. |||++||++++|||.|+||+++++|
T Consensus 282 a~~~agl~~~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e 361 (399)
T PRK06059 282 AYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCE 361 (399)
T ss_pred HHHHcCCCHHHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHH
Confidence 9999999999999999999999999999999999973 9999999999999999999999999
Q ss_pred HHHHHHcc-----CCCCCEEEEEecccCcceeEEEEEE
Q 012522 405 LLSEMKRR-----GKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 405 ~~~~L~~~-----~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+++|||++ |++.++++++.|+++|.+.+++|+|
T Consensus 362 ~~~qLrg~ag~~Qv~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 362 LTWQLRGQAGGRQVEGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred HHHHhccCcCCccCCCccEEEEeccCCcccceEEEecC
Confidence 99999986 6789999999988888999999875
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-57 Score=462.22 Aligned_cols=347 Identities=19% Similarity=0.280 Sum_probs=288.2
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
++|+|||++.|||+|. ++.++.+|+.+|+++||+++||++++||.+++|+..+... ..++++.++..+|++ ..
T Consensus 1 ~~v~IvG~g~t~~~~~-----~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~-~~~~a~~v~~~lGl~-~~ 73 (385)
T PRK12578 1 RRVAVIGVGNSKFGRR-----DDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGI-ELYPAPIVAEYSGLT-GK 73 (385)
T ss_pred CceEEEeecccceeec-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccc-cCChHHHHHHHhCCC-CC
Confidence 4799999999999983 5789999999999999999999999999999998776433 345688899999996 46
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccccc----CC-ChhhhhhhcccccCccHHHHHHHHH
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG----QV-NPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~----~~-~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
+.++++++|+|++.+|..|++.|++|.+|++||+|+|+||..+..... .. ...|...+.+......+++.+++|+
T Consensus 74 ~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m 153 (385)
T PRK12578 74 VPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHM 153 (385)
T ss_pred CeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHH
Confidence 779999999999999999999999999999999999999976532111 00 1111111222222234678899999
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCC
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG 283 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g 283 (461)
++||+|||++++|++++|+||..||++ +|+ +++++|+++++|++++|
T Consensus 154 ~~~g~t~e~~a~va~~~~~~A~~np~a-~~~------------------------------~~i~~e~v~~s~~i~~P-- 200 (385)
T PRK12578 154 AVYGTTEEQMALVSVKAHKYGAMNPKA-HFQ------------------------------KPVTVEEVLKSRAISWP-- 200 (385)
T ss_pred HHhCcCHHHHHHHHHHHHHHHhcCChh-hcC------------------------------CCCCHHHHhcCCccCCC--
Confidence 999999999999999999999999975 453 45788899999998876
Q ss_pred ccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc------CCCCCCC-cHHHHHHHHHHHcCCCCCCccE
Q 012522 284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV------DPSVMGI-GPAVAIPAAVKSAGLQIDDINL 356 (461)
Q Consensus 284 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~------~p~~~~~-~~~~ai~~aL~~AGl~~~DID~ 356 (461)
+|.+|||+++|||+|+||++++.|++++.++.++|.+++.... .++.+.. ++..+++++|+++|++++|||+
T Consensus 201 -l~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~ 279 (385)
T PRK12578 201 -IKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEV 279 (385)
T ss_pred -ccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCE
Confidence 9999999999999999999999999998777789999887532 2333332 4568999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCC------------------CcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-----C
Q 012522 357 FEINEAFASQYVYCIKKLGLDPE------------------KVNVNGGAVALGHPLGATGARCVATLLSEMKRR-----G 413 (461)
Q Consensus 357 ~eiheafa~~~~~~~e~LGl~~~------------------~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-----~ 413 (461)
+|+||+|+++++..+|.||||+. |||++||++++|||.|+||+++++|+++|||++ |
T Consensus 280 ~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~ag~~qv 359 (385)
T PRK12578 280 ATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDEAGKLQQ 359 (385)
T ss_pred EEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCCcccCcC
Confidence 99999999999999999999973 899999999999999999999999999999976 6
Q ss_pred CC-CCEEEEEecccCcc-eeEEEEE
Q 012522 414 KD-CRFGVISMCIGSGM-GAAAVFE 436 (461)
Q Consensus 414 ~~-~~~gl~~~~~g~G~-g~A~v~~ 436 (461)
++ .++++++..+|.|. +.+.||+
T Consensus 360 ~~~~~~~l~~~~Gg~~~~~~~~v~~ 384 (385)
T PRK12578 360 PLKKYIGLVHNVGGTGHFAYVMILR 384 (385)
T ss_pred CcchheEEEeccCcchhhEEEEEEe
Confidence 65 47999987665543 3445553
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-58 Score=471.68 Aligned_cols=375 Identities=41% Similarity=0.570 Sum_probs=335.7
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHc--CCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT--RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP 125 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~a--gl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~ 125 (461)
|++|+|+|++||||++.++|++++..+++|.....+..+++. +|++.+||.+++|++.+.+..++++++.+++.+|+|
T Consensus 1 ~~~v~Ivg~~rt~~g~~~~~s~~~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~ 80 (392)
T COG0183 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLP 80 (392)
T ss_pred CceEEEEeeccCccccCCCCchhhcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCC
Confidence 468999999999999954588999999999988888888644 788889999999999888644789999999999998
Q ss_pred CCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccc-ccccCC----Chhhhhhh-cccccCccHHHHH
Q 012522 126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSI-SVVGQV----NPKVEIFT-QARDCLLPMGITS 199 (461)
Q Consensus 126 ~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~-~~~~~~----~~~~~~~~-~~~~~~~~~g~~a 199 (461)
.++|.++|+++|+||++|+..|++.|++|.+|++|++|+|+||+.|+ +.+..+ .+.+...+ ........|++++
T Consensus 81 ~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~~A 160 (392)
T COG0183 81 GSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMGREGVRVLDSAVDPMFEDPLGDATPGYLMGLTA 160 (392)
T ss_pred CCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCccccchhhhhhhhhhccccccccccchhHHHHHH
Confidence 77999999999999999999999999999999999999999999886 333221 11111111 2233345799999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCC--CCHHHHhccCC
Q 012522 200 ENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPN--TTIADLAKLKP 277 (461)
Q Consensus 200 ~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~--~t~e~l~~~~p 277 (461)
++|+++||+|||+||+|++++|+||.+||++++| +||.|+++... .+..|+.+|.. .+.|.+..++|
T Consensus 161 ~~~~~~yGitre~~d~~Av~sh~~A~~np~a~~~-~eI~~~~v~~~----------~~~~dp~~r~d~~~~~dg~a~l~~ 229 (392)
T COG0183 161 ERYAKRYGISREDQDEVAVKSHKNAAANPKAGFF-DEITPEDVLNS----------PVVADPLRRLDCSPTSDGAAALVP 229 (392)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHhhHhcCCC-CceeeEEecCC----------ceecCCcccCCCCCChhhhcCcee
Confidence 9999999999999999999999999999999999 99999987542 57789999998 99999999999
Q ss_pred CCCCC-CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCC-CCCcc
Q 012522 278 AFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQ-IDDIN 355 (461)
Q Consensus 278 vf~~~-g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~-~~DID 355 (461)
.|... |..|.+|.+++.||++++++++.+.+.++++.+++++.++..++.+|..+ ..+..+++++|+++++. .+|||
T Consensus 230 a~~~~~g~~tagnas~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~~-~~~v~av~~~~~~~~l~~~edlg 308 (392)
T COG0183 230 AFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DGPVAAVHDALTIAGLLALEDLG 308 (392)
T ss_pred ccccCCceEEEecccccccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCcccc-cCCHHHHHHHHHHcCCchhhhcC
Confidence 99875 79999999999999999999999999999999999999999999999888 88899999999999999 99999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCC----CEEEEEecccCc-ce
Q 012522 356 LFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDC----RFGVISMCIGSG-MG 430 (461)
Q Consensus 356 ~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~----~~gl~~~~~g~G-~g 430 (461)
+||++|+|+.+...+.+.+|. .|||++||++++|||+||||+++++++++||+++ +. ++++++.|.||| ++
T Consensus 309 l~e~nEafa~~~~~~~~~~G~--~~VN~~GGaiA~GHPiGAtG~~~~~~l~~ql~~~--~~~~~~~~g~~t~~~Ggg~~g 384 (392)
T COG0183 309 LAEKGEAFAAVALGVTKILGD--LPVNPSGGAIALGHPIGATGARILVELARQLRGR--GQVVAKRRGLATLCIGGGGQG 384 (392)
T ss_pred ceecChHHHHHHHhhHHhcCC--ceeCCCcchhhcCCCccchHHHHHHHHHHHHhhc--cccccccceeeEEEecCccee
Confidence 999999999999999999999 8999999999999999999999999999999996 55 899999999999 99
Q ss_pred eEEEEEEc
Q 012522 431 AAAVFERG 438 (461)
Q Consensus 431 ~A~v~~~~ 438 (461)
.+++|++.
T Consensus 385 ~a~vl~~~ 392 (392)
T COG0183 385 VAAVLERV 392 (392)
T ss_pred EEEEEecC
Confidence 99999863
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-56 Score=458.96 Aligned_cols=332 Identities=23% Similarity=0.314 Sum_probs=280.4
Q ss_pred cEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC
Q 012522 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP 129 (461)
Q Consensus 50 ~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~ 129 (461)
+|+|||+++|||+|. + ++.+..+|+.+|+++||+|+||++++||.+++|+..++.. . ...+...+|+. ..|
T Consensus 2 ~v~IvG~~~t~~~~~--~--~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~-~---~~~~~~~lGl~-~~~ 72 (391)
T PRK08256 2 KVFVAGVGMTPFEKP--G--ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDST-S---GQRALYEVGMT-GIP 72 (391)
T ss_pred cEEEEeccccccccC--C--CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcc-h---hHHHHHHcCCC-CCC
Confidence 699999999999962 2 4678899999999999999999999999999998876543 1 22456688994 568
Q ss_pred eEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccc--c---CCCh------hhhhhhc-ccccCccHHH
Q 012522 130 LRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV--G---QVNP------KVEIFTQ-ARDCLLPMGI 197 (461)
Q Consensus 130 ~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~--~---~~~~------~~~~~~~-~~~~~~~~g~ 197 (461)
.++++.+|+|++.+|..|+++|++|++|++|++|+|+++..++... . .+.. .|. .+. .......|++
T Consensus 73 ~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~ 151 (391)
T PRK08256 73 IVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQ-GFDPAPPALRMFGG 151 (391)
T ss_pred CcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhc-ccccCCccHHHHHH
Confidence 8999999999999999999999999999999999999986543110 0 0100 010 011 1112246899
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCC
Q 012522 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (461)
Q Consensus 198 ~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~p 277 (461)
.+++|+++||++||++++|++++|+||..||++ +| |.++|+|+++++||
T Consensus 152 ~a~~y~~~~G~t~e~~a~vav~~~~~A~~np~A-~~------------------------------~~~~t~e~~~~s~~ 200 (391)
T PRK08256 152 AGREHMEKYGTTAETFAKIGVKARRHAANNPYA-QF------------------------------RDEYTLEDVLASPM 200 (391)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChh-hc------------------------------CCCCCHHHHhcCCc
Confidence 999999999999999999999999999999977 33 34689999999999
Q ss_pred CCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCC----------cHHHHHHHHHHHc
Q 012522 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGI----------GPAVAIPAAVKSA 347 (461)
Q Consensus 278 vf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~----------~~~~ai~~aL~~A 347 (461)
+++| +|.+|||+++|||+|+||++++.|+++++++.++|.+++.....+..+.. ++..+++++|+++
T Consensus 201 i~~P---l~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~a 277 (391)
T PRK08256 201 IWGP---LTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQA 277 (391)
T ss_pred ccCC---CcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHc
Confidence 9987 99999999999999999999999999987777899998877655443221 2457999999999
Q ss_pred CCCCCCccEEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCCcccccCchhhHHHHHHHHHHHHH
Q 012522 348 GLQIDDINLFEINEAFASQYVYCIKKLGLDPE------------------KVNVNGGAVALGHPLGATGARCVATLLSEM 409 (461)
Q Consensus 348 Gl~~~DID~~eiheafa~~~~~~~e~LGl~~~------------------~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L 409 (461)
|++++|||++|+||+|+++.+.++|.||||+. |||++||.+++|||.||||+++++|+++||
T Consensus 278 g~~~~DiD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL 357 (391)
T PRK08256 278 GIGPEDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQL 357 (391)
T ss_pred CCCHHHCCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999987 999999999999999999999999999999
Q ss_pred Hcc-----CCCCCEEEEEecc
Q 012522 410 KRR-----GKDCRFGVISMCI 425 (461)
Q Consensus 410 ~~~-----~~~~~~gl~~~~~ 425 (461)
+++ |++.++++++..+
T Consensus 358 ~g~ag~~Qv~~~~~~l~~~~G 378 (391)
T PRK08256 358 RGTAGARQVEGARLALQHNLG 378 (391)
T ss_pred cCCcCCCcCCccceEEEeccc
Confidence 987 6778899888754
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-56 Score=460.36 Aligned_cols=348 Identities=19% Similarity=0.216 Sum_probs=283.6
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHH-HHHHcCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRM-AAFYAGFPE 126 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~-ia~~lGl~~ 126 (461)
|++|+|||+++|||+|. +.+.+..+|+.+|+++||+|+||+++|||.+++++...... +++.++. ++..+|++.
T Consensus 15 m~~VaIvG~g~Tpfgr~----~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~-g~~~~~~~~~~~lGl~~ 89 (430)
T PRK06365 15 SRDVYMVAAGVTKFDKA----SPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQ-RQLLAGIMVQDYLGLVP 89 (430)
T ss_pred ccCEEEEEeeecCcccc----CCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeccccccc-ccchhhHHHHHhcCCCC
Confidence 46899999999999973 34677899999999999999999999999998876544333 4455554 578999964
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCC-----ChhhhhhhcccccCccHHHHHHH
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV-----NPKVEIFTQARDCLLPMGITSEN 201 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~a~~ 201 (461)
.|+++|+++|+|+..+|..|++.|++|.+|+|||+|+|++|..++..+..+ ...|. .+........|++.+++
T Consensus 90 -~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~-~~~g~~~~~~~al~a~r 167 (430)
T PRK06365 90 -KPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFD-YPLGGFYTGYYAMMAVR 167 (430)
T ss_pred -CceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhccccccccc-ccccCccHHHHHHHHHH
Confidence 899999999999999999999999999999999999999998654222111 11121 12222122358999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC
Q 012522 202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281 (461)
Q Consensus 202 ~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~ 281 (461)
|+++||+|||++++|++++|+||.+||.+. +|.++|+|++.+++++++|
T Consensus 168 y~~~yG~t~e~la~vav~~~~~A~~NP~A~-------------------------------~~~~~t~e~v~~s~~i~~P 216 (430)
T PRK06365 168 HMYEFGTTVEQLAKVSVKNHGNAIHNPFAQ-------------------------------SPMKITVEDVRKSPMVSYP 216 (430)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHhhCcHhh-------------------------------cCCCCCHHHHhcCCccccC
Confidence 999999999999999999999999999872 2446899999999998866
Q ss_pred CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeee--ccCCCCCC--------------------------
Q 012522 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAV--GVDPSVMG-------------------------- 333 (461)
Q Consensus 282 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~--~~~p~~~~-------------------------- 333 (461)
+|.+|||+++|||+|+||++++.|++++.+|+ +|.+.+.. ..++..+.
T Consensus 217 ---lt~~d~~~~sDGAaAvvl~See~A~~l~~~pv-~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (430)
T PRK06365 217 ---LTRLDVCAMSDGAACAILASEDKAFEITDKPV-LIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSF 292 (430)
T ss_pred ---cchhhcCCcCCceEEEEEecHHHHHhcCCCCe-EEEEEEEecccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999998885 55555443 22222111
Q ss_pred CcHHHHHHHHHHHcCCC--CCCccEEEecCCChHHHHHHHHHcCCCC------------------CCcCCCCCcccccCc
Q 012522 334 IGPAVAIPAAVKSAGLQ--IDDINLFEINEAFASQYVYCIKKLGLDP------------------EKVNVNGGAVALGHP 393 (461)
Q Consensus 334 ~~~~~ai~~aL~~AGl~--~~DID~~eiheafa~~~~~~~e~LGl~~------------------~~vn~~GG~~~~Ghp 393 (461)
.....+++++|+++||+ ++|||++|+||+|+++++.++|+||||+ .|||++||++++|||
T Consensus 293 ~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~~~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Ghp 372 (430)
T PRK06365 293 RAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTSSEIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGHA 372 (430)
T ss_pred HHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCCc
Confidence 12247999999999998 8999999999999999999999999997 499999999999999
Q ss_pred hhhHHHHHHHHHHHHHHc-----------cCCCCCEEEEEecccCcc-eeEEEEEE
Q 012522 394 LGATGARCVATLLSEMKR-----------RGKDCRFGVISMCIGSGM-GAAAVFER 437 (461)
Q Consensus 394 ~gatG~~~~~~~~~~L~~-----------~~~~~~~gl~~~~~g~G~-g~A~v~~~ 437 (461)
.|+||+++++++++|||+ +|++.++++++..+|.|. ..+.||++
T Consensus 373 ~GatG~~~~~e~~~QLrG~a~~~~~~~~rQv~~a~~~l~~~~gg~~~~~~~~vl~~ 428 (430)
T PRK06365 373 VGATGIMQAVFMFWQLQGRIKKHFHDDYLQVKNAKRGLIHSHAGTGTYVTVTILEA 428 (430)
T ss_pred ccHHHHHHHHHHHHHHhcccCCCCCcccccCCCccEEEEecCCcccceEEEEEEec
Confidence 999999999999999995 356788999987665543 34555544
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-56 Score=457.99 Aligned_cols=356 Identities=22% Similarity=0.262 Sum_probs=284.1
Q ss_pred CCcEEEEeeeeccc-ccc---C-------CCCCCCCCHHHHHHHHHHHHHHHcCCCcCC--cCeEEEEeecCCCC-ccch
Q 012522 48 DDDVVIVAAYRTAI-CKA---K-------RGGFKDTLADDLLAPVLKAVIEKTRLNPSE--VGDIVVGTVLAPGS-TRAM 113 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~-~r~---~-------~G~~~~~~~~eL~~~A~~~AL~~agl~~~~--Id~vi~g~~~~~~~-~~~~ 113 (461)
|++|||||++|||| +|. + .|.+++.++.||+.+|+++||+++||+++| ||.+++|+..+... .+.+
T Consensus 11 ~~~v~Ivg~~rTpf~gk~~~~~~~~~~~~~G~~~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~ 90 (438)
T PTZ00455 11 AKRVFVVGGHITPFVGKGSPLFIDKKHPDFGKKENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGH 90 (438)
T ss_pred cCceEEEEeecccccCCCccccccccccccCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccc
Confidence 66899999999999 873 2 577789999999999999999999999999 99999999876542 1467
Q ss_pred HHHHHHHHcCCC------CCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccC-CC--hhhhh
Q 012522 114 ECRMAAFYAGFP------ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ-VN--PKVEI 184 (461)
Q Consensus 114 ~a~~ia~~lGl~------~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~-~~--~~~~~ 184 (461)
+++.++..+|++ ..+|.++|+++|+||+.||..|++.|++|.+|++|++|+|+||+.|.+.+.. +. ..+..
T Consensus 91 ~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~ 170 (438)
T PTZ00455 91 LGPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRR 170 (438)
T ss_pred hHHHHHHhccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccc
Confidence 888888787776 5799999999999999999999999999999999999999999877543211 00 00100
Q ss_pred h-h-cccccCccHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccC
Q 012522 185 F-T-QARDCLLPMGITSENVAQRFG-VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDD 261 (461)
Q Consensus 185 ~-~-~~~~~~~~~g~~a~~~~~~~g-~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de 261 (461)
. . ........+++. .+|+++|| +|||++|+|++++|.++..||.+.++++++ + .....|+
T Consensus 171 ~~~~~~~~~~~~~a~~-~~ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~---t-------------~~~~~d~ 233 (438)
T PTZ00455 171 QRKLDDFTFPCLFAKR-MKYIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKL---S-------------LEFCTGA 233 (438)
T ss_pred cccccCcchHHHHHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCC---C-------------ceeeccc
Confidence 0 0 000000113443 38899996 999999999999999999999884222211 1 1123355
Q ss_pred CCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCe----eEEEEEeeeecc----CC---C
Q 012522 262 GIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPI----LGVFRSFSAVGV----DP---S 330 (461)
Q Consensus 262 ~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~----~a~i~g~~~~~~----~p---~ 330 (461)
.+| +.| +++++++.+| ++.+|||+++|||+|+||++++.|++++.+| .++|.+++..+. +| .
T Consensus 234 ~~~---~~e-~l~s~~i~~p---l~~~d~s~~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~ 306 (438)
T PTZ00455 234 SDK---NPK-FLGNETYKPF---LRMTDCSQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDAT 306 (438)
T ss_pred ccc---chh-hhcCCcccCc---CchhcCCCccccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccccc
Confidence 555 333 3345555544 8899999999999999999999999999887 689999988764 34 2
Q ss_pred CCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCC------------------CCcCCCCCcccccC
Q 012522 331 VMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDP------------------EKVNVNGGAVALGH 392 (461)
Q Consensus 331 ~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~------------------~~vn~~GG~~~~Gh 392 (461)
.++.. ..+++++|+++|++++|||++|+||+|+++++.++|.||||+ .|||++||++++||
T Consensus 307 ~~~~~-~~A~~~a~~~AGl~~~DiD~~Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GH 385 (438)
T PTZ00455 307 RMFTS-RAAAQKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGH 385 (438)
T ss_pred cchHH-HHHHHHHHHHcCCCHHHCcEeeecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCC
Confidence 33333 689999999999999999999999999999999999999998 69999999999999
Q ss_pred chhhHHHHHHHHHHHHHHcc-----CCC-CCEEEEEecccCc
Q 012522 393 PLGATGARCVATLLSEMKRR-----GKD-CRFGVISMCIGSG 428 (461)
Q Consensus 393 p~gatG~~~~~~~~~~L~~~-----~~~-~~~gl~~~~~g~G 428 (461)
|.|+||+++++|+++|||++ |++ .++++++..+|.|
T Consensus 386 P~gAtG~~~v~e~~~QLrg~ag~~Qv~~~~~~gl~~~~Gg~~ 427 (438)
T PTZ00455 386 PVGATGVKQIMEVYRQMKGQCGEYQMKNIPALGATLNMGGDD 427 (438)
T ss_pred CcchHHHHHHHHHHHHHhhccccCCCCCcccEEEEeccCCCc
Confidence 99999999999999999975 777 5899998765544
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-55 Score=451.94 Aligned_cols=348 Identities=22% Similarity=0.252 Sum_probs=278.6
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCc-cchHHHHHHHHcCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST-RAMECRMAAFYAGFPE 126 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~-~~~~a~~ia~~lGl~~ 126 (461)
|++|+|||+++|||+| +++.++.+|+.+|+++||+++||++++||.|++|++.+.... ....+..+...+|+.
T Consensus 1 ~~~v~Ivg~g~tpfgr-----~~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~- 74 (389)
T PRK07516 1 MMTASIVGWAHTPFGK-----LDAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR- 74 (389)
T ss_pred CCcEEEEeCCcceeee-----cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-
Confidence 3589999999999997 367899999999999999999999999999999987644321 112223344456773
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccccc-CCCh-hhhhhh-ccccc-CccHHHHHHHH
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-QVNP-KVEIFT-QARDC-LLPMGITSENV 202 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~-~~~~-~~~~~~-~~~~~-~~~~g~~a~~~ 202 (461)
..|.++|+++|+||+.+|..|+++|++|.+|++|++|+|+||..|..... .... .+.... ..+.. ...|++.+++|
T Consensus 75 ~~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y 154 (389)
T PRK07516 75 FKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAY 154 (389)
T ss_pred CCceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999976542211 0100 110000 00111 23599999999
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHH----HhccCCC
Q 012522 203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIAD----LAKLKPA 278 (461)
Q Consensus 203 ~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~----l~~~~pv 278 (461)
+++||++||++++|++++|+||..||.+ +|+ +++|+|+ +.+++++
T Consensus 155 ~~~yg~~~e~~a~vav~~~~~A~~nP~A-~~~------------------------------~~~t~~~~~~~~~~~~~i 203 (389)
T PRK07516 155 FQRYGDQSDALAMIAAKNHANGVANPYA-QMR------------------------------KDLGFEFCRTVSEKNPLV 203 (389)
T ss_pred HHHHCCCHHHHHHHHHHHHHhhhcCChh-hcC------------------------------CcccHHhhhhhhhcCCcc
Confidence 9999999999999999999999999987 332 2355553 5566776
Q ss_pred CCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-------CCCCCCCcHHHHHHHHHHHcCCCC
Q 012522 279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-------DPSVMGIGPAVAIPAAVKSAGLQI 351 (461)
Q Consensus 279 f~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-------~p~~~~~~~~~ai~~aL~~AGl~~ 351 (461)
.+| +|.+|||+++|||+|+||++++.|++++ + .++|.+++.... ++. ...++..+++++|+++|+++
T Consensus 204 ~~p---l~~~d~~~~~DGAaa~il~s~~~a~~~~-~-~v~i~g~~~~~~~~~~~~~~~~-~~~~~~~a~~~a~~~agl~~ 277 (389)
T PRK07516 204 AGP---LRRTDCSLVSDGAAALVLADAETARALQ-R-AVRFRARAHVNDFLPLSRRDPL-AFEGPRRAWQRALAQAGVTL 277 (389)
T ss_pred cCC---CchhhcCCcCcceEEEEEecHHHHHhcC-C-CEEEEEEEeccCcccccCCCcc-ccHHHHHHHHHHHHHcCCCH
Confidence 655 9999999999999999999999999985 3 358988877632 221 23456789999999999999
Q ss_pred CCccEEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-
Q 012522 352 DDINLFEINEAFASQYVYCIKKLGLDPE------------------KVNVNGGAVALGHPLGATGARCVATLLSEMKRR- 412 (461)
Q Consensus 352 ~DID~~eiheafa~~~~~~~e~LGl~~~------------------~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~- 412 (461)
+|||++|+||+|+++++.++|.|||++. |||++||.+++|||.||||+++++|+++||+++
T Consensus 278 ~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~g~a 357 (389)
T PRK07516 278 DDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLTGEA 357 (389)
T ss_pred HHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999985 999999999999999999999999999999987
Q ss_pred ----CCCCCEEEEEecccCcc-eeEEEEEEc
Q 012522 413 ----GKDCRFGVISMCIGSGM-GAAAVFERG 438 (461)
Q Consensus 413 ----~~~~~~gl~~~~~g~G~-g~A~v~~~~ 438 (461)
|++.++++++..+|.+. +..+||.++
T Consensus 358 g~rQv~~a~~~l~~~~gg~~~~~~~~vl~~~ 388 (389)
T PRK07516 358 GGMQIPGAKLAGVFNMGGAAVANYVSILERV 388 (389)
T ss_pred cCCcCCchheeeeeccCcccceEEEEEEEec
Confidence 78999999998666553 344455554
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-55 Score=446.21 Aligned_cols=346 Identities=18% Similarity=0.163 Sum_probs=287.2
Q ss_pred CCcEEEEeeeeccc-cccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCcc-chHHHHHHHHcCCC
Q 012522 48 DDDVVIVAAYRTAI-CKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR-AMECRMAAFYAGFP 125 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~-~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~-~~~a~~ia~~lGl~ 125 (461)
+++|+|||++.||| +|. .+.++.+|+.+|+++||+|+||+++|||.+++++ .++...+ ..++..++..+|+.
T Consensus 2 ~~~v~IvG~g~t~~~~~~-----~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl~ 75 (386)
T PRK08313 2 KRLAAVLGTGQTKYVAKR-----QDVSMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGAT 75 (386)
T ss_pred CCcEEEEEeecCCcCccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCCC
Confidence 56999999999999 652 4778999999999999999999999999999987 3433211 23456788999994
Q ss_pred CCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHH
Q 012522 126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQR 205 (461)
Q Consensus 126 ~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 205 (461)
..++++++.+|+++..++..|+++|++|.+|+|||+|+|+++.............+. .+.+......+++.+++|+++
T Consensus 76 -~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~-~~~g~~~~~~~al~a~~ym~~ 153 (386)
T PRK08313 76 -GKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFT-KPVGAGAGGYFAPHVRAYIRR 153 (386)
T ss_pred -CCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccc-cccccchHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999987632111111111111 122222334689999999999
Q ss_pred hCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCC-CCCHHHHhccCCCCCCCCc
Q 012522 206 FGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRP-NTTIADLAKLKPAFKKDGT 284 (461)
Q Consensus 206 ~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~-~~t~e~l~~~~pvf~~~g~ 284 (461)
||+++|+++++++++|++|.+||++ +| |+ ++|+|+++++|++++|
T Consensus 154 ~G~~~e~la~vav~~~~~A~~NP~A-~~------------------------------r~~~~t~e~v~~s~~ia~P--- 199 (386)
T PRK08313 154 SGAPEHIGAMVAVKDRLNGAKNPYA-HL------------------------------HQPDITLEKVMASQMLWDP--- 199 (386)
T ss_pred HCcCHHHHHHHHHHHHHHHccCcHH-hc------------------------------CCCCCCHHHHhcCCcccCC---
Confidence 9999999999999999999999998 33 34 3899999999999987
Q ss_pred cccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC-------CCCCcHHHHHHHHHHHcCCC--CCCcc
Q 012522 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS-------VMGIGPAVAIPAAVKSAGLQ--IDDIN 355 (461)
Q Consensus 285 lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-------~~~~~~~~ai~~aL~~AGl~--~~DID 355 (461)
+|.+|||+++|||+|+||++++.|++++.++.++|.|++... ++. ....+...+++++|+++|++ ++|||
T Consensus 200 l~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~-~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did 278 (386)
T PRK08313 200 IRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRT-EPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEID 278 (386)
T ss_pred CchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEe-cCcccccccccccHHHHHHHHHHHHHcCCCCChhhCC
Confidence 999999999999999999999999999888888999988763 222 22345668999999999998 79999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-----
Q 012522 356 LFEINEAFASQYVYCIKKLGLDPE------------------KVNVNGGAVALGHPLGATGARCVATLLSEMKRR----- 412 (461)
Q Consensus 356 ~~eiheafa~~~~~~~e~LGl~~~------------------~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~----- 412 (461)
++|+||+|++.++..+|.||||+. |||++||+++ |||.|+||+.+++|+++|||++
T Consensus 279 ~~el~d~F~~~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~l~-g~p~gatG~~~~~e~~~qlrG~ag~rQ 357 (386)
T PRK08313 279 VAEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGETAIGGRLPVNPSGGVLS-SNPIGASGMIRFAEAALQVMGKAGEHQ 357 (386)
T ss_pred EEEeccCChHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCcccc-cCCCcHHHHHHHHHHHHHhcccccCCc
Confidence 999999999999999999999986 8999999999 9999999999999999999986
Q ss_pred CCCCCEEEEEecccCcce-eEEEEEE
Q 012522 413 GKDCRFGVISMCIGSGMG-AAAVFER 437 (461)
Q Consensus 413 ~~~~~~gl~~~~~g~G~g-~A~v~~~ 437 (461)
|++.++++++..+|.+.. ..+||++
T Consensus 358 v~~a~~~l~~~~Gg~~~~~~~~v~~~ 383 (386)
T PRK08313 358 VDGARKALGHAYGGGSQFFSMWVVGS 383 (386)
T ss_pred CCCccEEEEeccCCcceEEEEEEEec
Confidence 778999999986654433 3444444
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-55 Score=448.52 Aligned_cols=348 Identities=22% Similarity=0.289 Sum_probs=291.0
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCc-cchHHHHHHHHcCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST-RAMECRMAAFYAGFPET 127 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~-~~~~a~~ia~~lGl~~~ 127 (461)
++|+|||+++|||++ +.+.++.+|+.+|+++||+++|+++++||.+++|+..++... .+++++.++..+|++ .
T Consensus 2 ~~v~IvG~~~tp~~~-----~~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~ 75 (389)
T PRK06064 2 RDVAIIGVGQTKFGE-----LWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-P 75 (389)
T ss_pred CcEEEEEccccccee-----cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-C
Confidence 589999999999987 367899999999999999999999999999999987665531 256788899999996 6
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccc----cCCChhhhhhhcccccCccHHHHHHHHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV----GQVNPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
.|.++++++|+|++.+|..|+++|++|.+|++||+|.|+++..+.... ....+.....+.+......|++.+++|+
T Consensus 76 ~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~ 155 (389)
T PRK06064 76 IPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYM 155 (389)
T ss_pred CCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999987653110 0111111111222222336899999999
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCC
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG 283 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g 283 (461)
++||+|||+++++++++|++|.+||++ +| |+++|+|++++++++++|
T Consensus 156 ~~yG~s~e~~a~~a~~~~~~A~~np~a-~~------------------------------~~~~t~~~~~~s~~i~~P-- 202 (389)
T PRK06064 156 HKYGTTEEDLALVAVKNHYNGSKNPYA-QF------------------------------QKEITVEQVLNSPPVADP-- 202 (389)
T ss_pred HHHCCCHHHHHHHHHHHHHHHhhCcHh-hh------------------------------CCCCCHHHHhcCCcccCC--
Confidence 999999999999999999999999986 33 346899999999999987
Q ss_pred ccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCC------CC-CCCcHHHHHHHHHHHcCCCCCCccE
Q 012522 284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP------SV-MGIGPAVAIPAAVKSAGLQIDDINL 356 (461)
Q Consensus 284 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p------~~-~~~~~~~ai~~aL~~AGl~~~DID~ 356 (461)
+|.+|||+++|||+|+||++++.|++++.++. +|.|++.....+ +. ...++..+++++|+++|++++|||+
T Consensus 203 -l~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~v-~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~ 280 (389)
T PRK06064 203 -LKLLDCSPITDGAAAVILASEEKAKEYTDTPV-WIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDV 280 (389)
T ss_pred -CchhhcCCCCCcceEEEEecHHHHHHhcCCCe-EEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCE
Confidence 99999999999999999999999999987775 999998765332 22 2334568999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCC------------------CcCCCCCcccccCchhhHHHHHHHHHHHHHHcc------
Q 012522 357 FEINEAFASQYVYCIKKLGLDPE------------------KVNVNGGAVALGHPLGATGARCVATLLSEMKRR------ 412 (461)
Q Consensus 357 ~eiheafa~~~~~~~e~LGl~~~------------------~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~------ 412 (461)
+|+||+|+.+.++++|.||||+. |||++||.+++|||.|+||+++++++++||+++
T Consensus 281 ~e~~d~ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~~g~r 360 (389)
T PRK06064 281 AEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGRQ 360 (389)
T ss_pred EEecCCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999863 899999999999999999999999999999965
Q ss_pred -CCCCCEEEEEecccCcce-eEEEEEE
Q 012522 413 -GKDCRFGVISMCIGSGMG-AAAVFER 437 (461)
Q Consensus 413 -~~~~~~gl~~~~~g~G~g-~A~v~~~ 437 (461)
|++.++++++..+|.+.. .++||++
T Consensus 361 qv~~a~~~l~~~~g~~~~~~~~~vl~~ 387 (389)
T PRK06064 361 QVIGAGYGLTHNVGGTGHTAVVHILSR 387 (389)
T ss_pred cCCCccEEEEecCCCccceEEEEEEEe
Confidence 567899999986554433 3455543
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-55 Score=452.15 Aligned_cols=352 Identities=19% Similarity=0.250 Sum_probs=277.0
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCcc--chHHHHHHHHcCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR--AMECRMAAFYAGFPE 126 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~--~~~a~~ia~~lGl~~ 126 (461)
++|+|||+++|||+|. +..++.++.||+.+|+++||+|+||++++||.+++++..++...+ ...........++ .
T Consensus 3 ~~v~Ivg~~~t~~~r~--~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~~~-~ 79 (403)
T PRK06289 3 DDVWVLGGYQSDFARN--WTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPAL-W 79 (403)
T ss_pred CcEEEEeCCcCccccc--cCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhhcC-C
Confidence 5899999999999973 445688999999999999999999999999999999876653211 1111111123344 2
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc-ccCCC-hhhhhh-hc-cccc-CccHHHHHHH
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-VGQVN-PKVEIF-TQ-ARDC-LLPMGITSEN 201 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~-~~~~~-~~~~~~-~~-~~~~-~~~~g~~a~~ 201 (461)
..|+++++++|+|++.+|..|+.+|++|++|+|||+|+|++|..+... ...+. ..+... +. .+.. ...|++.+++
T Consensus 80 g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~ 159 (403)
T PRK06289 80 GVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADE 159 (403)
T ss_pred CCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHH
Confidence 468999999999999999999999999999999999999998754311 10110 011111 11 1111 2348999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC
Q 012522 202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281 (461)
Q Consensus 202 ~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~ 281 (461)
|+++||++||++++|++++|+||.+||++ +|+.++. .++++.+++..++++.+
T Consensus 160 y~~~yG~t~e~la~va~~~~~~A~~NP~A-~~~~~~~-------------------------~~~~~~~d~~~s~~i~~- 212 (403)
T PRK06289 160 YDRRYGLDEEHLRAIAEINFANARRNPNA-QTRGWAF-------------------------PDEATNDDDATNPVVEG- 212 (403)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHccCcHh-hcCcccc-------------------------ccccchhhhhcCCcccC-
Confidence 99999999999999999999999999998 4443210 02477788888887654
Q ss_pred CCccccCCCCcccccceEEEEcchhHHHhcCC-CeeEEEEEeeeeccC-------------CCCCCCcHHHHHHHHHHHc
Q 012522 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGL-PILGVFRSFSAVGVD-------------PSVMGIGPAVAIPAAVKSA 347 (461)
Q Consensus 282 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~-~~~a~i~g~~~~~~~-------------p~~~~~~~~~ai~~aL~~A 347 (461)
++|.+|||+++|||+|+||++++.+++++. ++.++|.+++..... +..+ ..+..+++++|+++
T Consensus 213 --Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~aa~~a~~~A 289 (403)
T PRK06289 213 --RLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVL-PHVRQAVLDAYRRA 289 (403)
T ss_pred --CCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEecccccccccccccccccccc-HHHHHHHHHHHHHc
Confidence 599999999999999999999999999986 676899999876321 1122 22567999999999
Q ss_pred CCCCCCccEEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCCcccccCchhhHHHHHHHHHHHHH
Q 012522 348 GLQIDDINLFEINEAFASQYVYCIKKLGLDPE------------------KVNVNGGAVALGHPLGATGARCVATLLSEM 409 (461)
Q Consensus 348 Gl~~~DID~~eiheafa~~~~~~~e~LGl~~~------------------~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L 409 (461)
|++++|||++|+||+|++++++++|+||||+. |||++||.+++|||.|+||+++++|+++||
T Consensus 290 gi~~~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QL 369 (403)
T PRK06289 290 GVGLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQV 369 (403)
T ss_pred CCCHHHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999973 899999999999999999999999999999
Q ss_pred Hcc-----CCCCCEEEEEecccCcceeEEE
Q 012522 410 KRR-----GKDCRFGVISMCIGSGMGAAAV 434 (461)
Q Consensus 410 ~~~-----~~~~~~gl~~~~~g~G~g~A~v 434 (461)
|++ +++.+.++++ |.||+++.+++
T Consensus 370 rg~ag~~Qv~~~~~~l~~-~~gg~~~~~~~ 398 (403)
T PRK06289 370 TGTAGDYQVEGAKTFGTL-NIGGSTTTTVS 398 (403)
T ss_pred hccccCccCCchheEEEE-ecCcccceEEE
Confidence 986 5566777766 45555555444
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-55 Score=444.98 Aligned_cols=341 Identities=17% Similarity=0.160 Sum_probs=282.0
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCc-cchHHHHHHHHcCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST-RAMECRMAAFYAGFPET 127 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~-~~~~a~~ia~~lGl~~~ 127 (461)
++|+|||++.|||+|. .+.+..+|+.+|+++||+++||+++|||.+++++. ++... .+..+..++..+|+. .
T Consensus 9 ~~vaIvG~g~t~~~~~-----~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~-~~~~~~~~~~a~~l~~~lG~~-~ 81 (392)
T PRK06065 9 KRVAVIGAGLTLFRRR-----LLETPQELAWEAASKALDEAGLELKDIDCVVIGSA-PDAFDGVHMKGEYLSHGSGGI-R 81 (392)
T ss_pred CceEEEEecccCCcCC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecc-CCcccccccHHHHHHHHcCCC-C
Confidence 5899999999999983 47788999999999999999999999999999863 33221 234667788899984 5
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCC---ChhhhhhhcccccCccHHHHHHHHHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV---NPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
.|+++|+.+|+||..+|..|+++|++|.+|+|||+|+|+|+.........+ .+.+...|.+......+++.+++|++
T Consensus 82 ~~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym~ 161 (392)
T PRK06065 82 KPVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYMA 161 (392)
T ss_pred CCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999865211111000 01111223333333358999999999
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCc
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT 284 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~ 284 (461)
+||+++|+++++++++|+||.+||++ + +|+++|+|+++++|+|.+|
T Consensus 162 ~yG~~~e~lA~vav~~~~~A~~NP~A-~------------------------------~r~~lt~e~vl~s~~ia~P--- 207 (392)
T PRK06065 162 TYGIKKEEIALVSVKNKRNALNNPYA-Q------------------------------LGSKITVEDVLKSEVLVWP--- 207 (392)
T ss_pred HHCcCHHHHHHHHHHHHHhhccCchh-h------------------------------hcCCCCHHHHhcCCcccCC---
Confidence 99999999999999999999999998 2 2457999999999999987
Q ss_pred cccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCC------CCCCCcHHHHHHHHHHHcCCCC--CCccE
Q 012522 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP------SVMGIGPAVAIPAAVKSAGLQI--DDINL 356 (461)
Q Consensus 285 lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p------~~~~~~~~~ai~~aL~~AGl~~--~DID~ 356 (461)
+|.++||+++|||+|+||++++.|++++.+|. +|.+++...... .....++..+++++|+++|+++ +|||+
T Consensus 208 l~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~v-~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~ 286 (392)
T PRK06065 208 VQLLDVSPVSDGAAAIVLASEDLARRYTDTPV-WVEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDV 286 (392)
T ss_pred CchhhcCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcE
Confidence 99999999999999999999999999998775 788887743210 1122334679999999999985 99999
Q ss_pred EEecCCChHHHHHHHHHcCCCCC------------------CcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-----C
Q 012522 357 FEINEAFASQYVYCIKKLGLDPE------------------KVNVNGGAVALGHPLGATGARCVATLLSEMKRR-----G 413 (461)
Q Consensus 357 ~eiheafa~~~~~~~e~LGl~~~------------------~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-----~ 413 (461)
+|+||+|+++++.++|.||||+. |||++||++++|||.|+||+++++|+++|||++ |
T Consensus 287 ~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ag~rQv 366 (392)
T PRK06065 287 AEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGTAGKMQV 366 (392)
T ss_pred EEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhccccCCcC
Confidence 99999999999999999999873 999999999999999999999999999999977 7
Q ss_pred CCC-CEEEEEecccCccee
Q 012522 414 KDC-RFGVISMCIGSGMGA 431 (461)
Q Consensus 414 ~~~-~~gl~~~~~g~G~g~ 431 (461)
++. ++++++..+|.+...
T Consensus 367 ~~a~~~~l~~~~Gg~~~~~ 385 (392)
T PRK06065 367 KKPVHTGVAQAWGDLMQAG 385 (392)
T ss_pred CCccceeEEecccccccee
Confidence 788 799999765554333
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-55 Score=445.09 Aligned_cols=333 Identities=26% Similarity=0.327 Sum_probs=286.4
Q ss_pred EeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe
Q 012522 54 VAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV 133 (461)
Q Consensus 54 vg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v 133 (461)
||++.|||+|. .+.++.+|+.+|+++||+|+|+++++||.+++|++.+... .+++++.++..+|++ ..+.+++
T Consensus 1 vG~g~t~~~~~-----~~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lGl~-~~~~~~v 73 (375)
T cd00829 1 VGVGMTPFGRR-----SDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRF-QSFPGALIAEYLGLL-GKPATRV 73 (375)
T ss_pred CeeeecCcccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccc-ccchHHHHHHHcCCC-CcceeeE
Confidence 68999999973 3789999999999999999999999999999998876654 467889999999996 7899999
Q ss_pred CCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccc--cccCCCh-hhhh--hhcccccCccHHHHHHHHHHHhCC
Q 012522 134 NRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS--VVGQVNP-KVEI--FTQARDCLLPMGITSENVAQRFGV 208 (461)
Q Consensus 134 ~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~--~~~~~~~-~~~~--~~~~~~~~~~~g~~a~~~~~~~g~ 208 (461)
+++|+|++.+|..|++.|++|.+|++|++|+|+++..+.. ......+ .|.. ..........|++.+++|+++||+
T Consensus 74 ~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~ 153 (375)
T cd00829 74 EAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGT 153 (375)
T ss_pred eCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999986531 0111111 1111 011112234699999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccC
Q 012522 209 TRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAG 288 (461)
Q Consensus 209 sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~ 288 (461)
|||+++.|++++|+||.+||++ +|+ .++|+|++.++||+|+| +|.+
T Consensus 154 t~e~~~~va~~~~~~A~~np~A-~~~------------------------------~~~t~d~~~~~~~i~~p---l~~~ 199 (375)
T cd00829 154 TREDLAKVAVKNHRNAARNPYA-QFR------------------------------KPITVEDVLNSRMIADP---LRLL 199 (375)
T ss_pred CHHHHHHHHHHHHHHHhcCChh-hcC------------------------------CCCCHHHHhcCCcccCC---Cchh
Confidence 9999999999999999999988 553 36899999999999976 9999
Q ss_pred CCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCC-------CCCcHHHHHHHHHHHcCCCCCCccEEEecC
Q 012522 289 NASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSV-------MGIGPAVAIPAAVKSAGLQIDDINLFEINE 361 (461)
Q Consensus 289 ~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-------~~~~~~~ai~~aL~~AGl~~~DID~~eihe 361 (461)
|||+++|||+|+||++++.|+++ .++.++|.+++.....+.. +..++..+++++|+++|++++|||++|+||
T Consensus 200 ~~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d 278 (375)
T cd00829 200 DCCPVSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYD 278 (375)
T ss_pred hcCCCCCceeEEEEecHHHHhhc-CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecC
Confidence 99999999999999999999998 6677899999887654432 456778999999999999999999999999
Q ss_pred CChHHHHHHHHHcCCCC--C----------------CcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-----CCCCCE
Q 012522 362 AFASQYVYCIKKLGLDP--E----------------KVNVNGGAVALGHPLGATGARCVATLLSEMKRR-----GKDCRF 418 (461)
Q Consensus 362 afa~~~~~~~e~LGl~~--~----------------~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-----~~~~~~ 418 (461)
+|+++++.++|.||||+ + |||++||.+++|||.|+||+++++++++|||++ |++.++
T Consensus 279 ~F~~~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~ag~~qv~~~~~ 358 (375)
T cd00829 279 CFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGEAGARQVPGARV 358 (375)
T ss_pred cChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCCcccccCCCccE
Confidence 99999999999999998 3 999999999999999999999999999999975 778899
Q ss_pred EEEEecccCc
Q 012522 419 GVISMCIGSG 428 (461)
Q Consensus 419 gl~~~~~g~G 428 (461)
++++..+|.+
T Consensus 359 ~l~~~~gg~~ 368 (375)
T cd00829 359 GLAHNIGGTG 368 (375)
T ss_pred EEEecCCCcc
Confidence 9998764443
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-54 Score=441.60 Aligned_cols=342 Identities=21% Similarity=0.239 Sum_probs=281.0
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
+++|+|||++.|||+|. .+.++.+|+.+|+++||+|+||+++|||.+++++... ...+..++..+|++ .
T Consensus 7 ~~~vaIvG~g~t~~~~~-----~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~-----~~~~~~la~~lGl~-~ 75 (384)
T PRK06158 7 RGRTAIVGAATAGLGEA-----PGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDD-----ALWGLSVAEYLGIR-P 75 (384)
T ss_pred CCCEEEEEeeeccceeC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC-----CCcHHHHHHHcCCC-C
Confidence 37899999999999873 5789999999999999999999999999999987432 12234688899995 4
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEE-eeccccccccccccCCC-hhhhhhhcc-cccCccHHHHHHHHHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAA-GLESMTVNSISVVGQVN-PKVEIFTQA-RDCLLPMGITSENVAQ 204 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~-G~E~~s~~~~~~~~~~~-~~~~~~~~~-~~~~~~~g~~a~~~~~ 204 (461)
.++++++.+|+|+..+|..|++.|++|.+|+|||+ |.|.++... ....... ..|. .+.+ ..+...|++.+++|++
T Consensus 76 ~~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~al~a~~ym~ 153 (384)
T PRK06158 76 RFVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGG-KLRSMLDPQPYE-APYKPVNPVSAYALAAARHMH 153 (384)
T ss_pred eeeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcc-cccccccccchh-cccCCCCcHHHHHHHHHHHHH
Confidence 78889999999999999999999999999999987 677665311 0111011 1121 1222 2223458999999999
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCc
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT 284 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~ 284 (461)
+||+|+|+++++++++|+||..||++ + +|+++|+|+++++|+|.+|
T Consensus 154 ~yG~t~e~~a~vav~~~~~a~~NP~A-~------------------------------~~~~~t~e~vl~s~~ia~P--- 199 (384)
T PRK06158 154 QYGTTREQLAEVAVAARQWAQLNPEA-F------------------------------MRDPLTIDDVLAARMVSDP--- 199 (384)
T ss_pred HHCcCHHHHHHHHHHHHHHHhcCchh-h------------------------------hCCCCCHHHHhcCCccCCC---
Confidence 99999999999999999999999988 2 3457999999999999987
Q ss_pred cccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc------CCCCCCCcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV------DPSVMGIGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 285 lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~------~p~~~~~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
+|.++||+++|||+|+||++++.|++++.++ .++.+++.... .++........+++++|+++|++++|||++|
T Consensus 200 l~~~d~~~~~DGAaAvVL~s~e~A~~l~~~~-v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~E 278 (384)
T PRK06158 200 LSVRDCCLVTDGAGAVVMVRADRARDLPRPP-VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVE 278 (384)
T ss_pred CchhhcCCccCCeEEEEEecHHHHhhcCCCc-EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEE
Confidence 9999999999999999999999999988776 48888776432 1222333456799999999999999999999
Q ss_pred ecCCChHHHHHHHHHcCCCCC------------------CcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-----CCC
Q 012522 359 INEAFASQYVYCIKKLGLDPE------------------KVNVNGGAVALGHPLGATGARCVATLLSEMKRR-----GKD 415 (461)
Q Consensus 359 iheafa~~~~~~~e~LGl~~~------------------~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-----~~~ 415 (461)
+||+|++.+++++|.||||+. |||++||+++.||| |+||+++++|+++|||++ |++
T Consensus 279 lyD~Fs~~~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~ag~rQv~~ 357 (384)
T PRK06158 279 LYDAFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGEAGERQVAG 357 (384)
T ss_pred ecCCchHHHHHHHHHcCCCCCCcHHHHHHCCCCccCCCccccCCChhhcCCCC-chhhHHHHHHHHHHHcCCCCCCcCCC
Confidence 999999999999999999975 89999999999999 999999999999999986 778
Q ss_pred CCEEEEEecccCcc-eeEEEEEEc
Q 012522 416 CRFGVISMCIGSGM-GAAAVFERG 438 (461)
Q Consensus 416 ~~~gl~~~~~g~G~-g~A~v~~~~ 438 (461)
.++++++.++|.+. ...+||+++
T Consensus 358 a~~gl~~~~Gg~~~~~~~~vl~~~ 381 (384)
T PRK06158 358 AEVALAHGNGGVLSSQATAILGTA 381 (384)
T ss_pred CCEEEEECCCCcccceEEEEEecc
Confidence 99999998665443 334556553
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-54 Score=434.85 Aligned_cols=345 Identities=18% Similarity=0.211 Sum_probs=275.8
Q ss_pred CCCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcC-CCc-CCcCeEEEEeecCCCCcc-chHHHHHHHHcC
Q 012522 47 FDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNP-SEVGDIVVGTVLAPGSTR-AMECRMAAFYAG 123 (461)
Q Consensus 47 ~~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~ag-l~~-~~Id~vi~g~~~~~~~~~-~~~a~~ia~~lG 123 (461)
+|++|+|||++.|||+|. ..+.+..+|+.+|+++||+|+| |++ +|||.+++++. +...+ ......++..+|
T Consensus 2 ~~~~vaIvG~g~t~~~~~----~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~--~~~~~~~~~~~~~~~~lg 75 (385)
T PRK06066 2 FLNRVAIVGIGWYGFRPT----TPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQE--DFWEGIAIADEFAPDQIG 75 (385)
T ss_pred CCCcEEEEEeeecCCcCC----CCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecC--cccCcccccchhHHHHcc
Confidence 477999999999999952 2478899999999999999999 997 79999988642 11101 112234567888
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccccc---CCChhhhhhhccccc-CccHHHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG---QVNPKVEIFTQARDC-LLPMGITS 199 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~---~~~~~~~~~~~~~~~-~~~~g~~a 199 (461)
+. ..|.+.+ |+|+..++..|++.|++|.+|+|||+|+|+++.... ... ...+.....|.+... ...+++.+
T Consensus 76 ~~-~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~-~~~~~~~~~~~~~~~p~g~~~p~~~~al~a 150 (385)
T PRK06066 76 GA-MRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILT-FSDVVKFAMDPIYVRPIGPPNPHFIAGLDA 150 (385)
T ss_pred cC-CCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccc-hhhhhhcccCcceecccCCCcHHHHHHHHH
Confidence 83 4577776 899999999999999999999999999999875211 111 011111111222222 22469999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCC
Q 012522 200 ENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF 279 (461)
Q Consensus 200 ~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf 279 (461)
++|+++||+++|+++.+++++|+||.+||++. | |+++|+|+++++++|.
T Consensus 151 ~rym~~yG~t~E~lA~Vavk~r~nA~~NP~A~-~------------------------------r~~~t~edvl~S~~ia 199 (385)
T PRK06066 151 VKFMSRKGITREDLALVVEKNKKAGLSNPRAS-Y------------------------------ASNISLEDVLSSEYVV 199 (385)
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHHhcCChhh-c------------------------------CCCCCHHHHhcCCccc
Confidence 99999999999999999999999999999982 2 4579999999999999
Q ss_pred CCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeec----cCCCCCCCcHH--HHHHHHHHHcCCC--C
Q 012522 280 KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG----VDPSVMGIGPA--VAIPAAVKSAGLQ--I 351 (461)
Q Consensus 280 ~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~----~~p~~~~~~~~--~ai~~aL~~AGl~--~ 351 (461)
+| +|.+|||+++|||+|+||++++.|++++.+|+ +|.+++... ..+..+...+. .+++++|+++|++ +
T Consensus 200 ~P---l~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~ 275 (385)
T PRK06066 200 YP---LTELDIAPFVDGAIVVVLASEEVAKKLTDDPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPR 275 (385)
T ss_pred CC---chhhccCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCH
Confidence 87 99999999999999999999999999998887 999887643 22333333343 6999999999998 7
Q ss_pred CCccEEEecCCChHHHHHHHHHcCCCC------------------CCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-
Q 012522 352 DDINLFEINEAFASQYVYCIKKLGLDP------------------EKVNVNGGAVALGHPLGATGARCVATLLSEMKRR- 412 (461)
Q Consensus 352 ~DID~~eiheafa~~~~~~~e~LGl~~------------------~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~- 412 (461)
+|||++|+||+|+++++.++|.||||+ .|||++||.+++|||.|+||+++++|+++||+++
T Consensus 276 ~DiD~~ei~D~Ft~~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g~A 355 (385)
T PRK06066 276 KEVDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRGEA 355 (385)
T ss_pred HHCcEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHcccc
Confidence 999999999999999999999999997 2799999999999999999999999999999986
Q ss_pred ---CCCCCEEEEEecccC--cceeEEEEEE
Q 012522 413 ---GKDCRFGVISMCIGS--GMGAAAVFER 437 (461)
Q Consensus 413 ---~~~~~~gl~~~~~g~--G~g~A~v~~~ 437 (461)
.++.++++++..+|. +.+...|+||
T Consensus 356 g~rQ~~a~~~l~~~~gg~~~~~~~v~v~~~ 385 (385)
T PRK06066 356 GARQGKAERAVVASWRGIPTLTGSVVVVER 385 (385)
T ss_pred cccCCCCcEEEEcCCCccCCccEEEEEEeC
Confidence 257889999875542 2344555553
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-54 Score=441.94 Aligned_cols=354 Identities=32% Similarity=0.464 Sum_probs=289.8
Q ss_pred EeeeeccccccCC---CCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHH-HHHHcCCCCCCC
Q 012522 54 VAAYRTAICKAKR---GGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRM-AAFYAGFPETVP 129 (461)
Q Consensus 54 vg~~~Tp~~r~~~---G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~-ia~~lGl~~~~~ 129 (461)
+|++||||+| +. |.+....+.||+.+|+++||++++|+|++||.|++|+.+++.. ++++++. +...+|+ .++|
T Consensus 1 ~g~~~Tpfg~-~~~~~g~~~~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~-g~~~~~~~~~~~lg~-~~~p 77 (393)
T cd00826 1 AGAAMTAFGK-FGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGE-GQNCAQQAAMHAGGL-QEAP 77 (393)
T ss_pred CccccCCCcc-CCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcc-cCcHHHHHHHHcCCC-CCCc
Confidence 5889999998 44 7778899999999999999999999999999999999987765 5667764 5556676 4789
Q ss_pred eEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCC
Q 012522 130 LRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVT 209 (461)
Q Consensus 130 ~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~s 209 (461)
+++|+++|+||+.+|..|+++|++|.+|++|++|+|+||..+.. .. ....+ ..+..+|+ +
T Consensus 78 ~~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~-~~----------------~~~~~--~~~~~~~~-~ 137 (393)
T cd00826 78 AIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAEN-NA----------------KEKHI--DVLINKYG-M 137 (393)
T ss_pred EEEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCccc-cc----------------ccchh--HHHHHHhC-C
Confidence 99999999999999999999999999999999999999874411 00 00000 22456788 8
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCC
Q 012522 210 RQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGN 289 (461)
Q Consensus 210 re~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~ 289 (461)
|++++.+++.++.++....+.|.+++++.++.+++.+ | .+....++...+|+++|+|++.+++|+|.+++++|.+|
T Consensus 138 r~~~~~~a~~s~~~~~~~~~~G~~~e~~a~v~~~~~~---~-~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~ 213 (393)
T cd00826 138 RACPDAFALAGQAGAEAAEKDGRFKDEFAKFGVKGRK---G-DIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGN 213 (393)
T ss_pred hhhccHHHHHHHHHHHHHHHcCCCHHHEEEEEEecCC---C-CEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechh
Confidence 8889999999998888888899998899888775421 0 01122333344557799999999999996667799999
Q ss_pred CCcccccceEEEEcchhHHHhcCC-------CeeEEEEEeeeeccCCC----CCCCcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 290 ASQVSDGAGAVLLMKRSLAVQKGL-------PILGVFRSFSAVGVDPS----VMGIGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 290 ~~~~~DGAaAvvL~s~~~A~~~g~-------~~~a~i~g~~~~~~~p~----~~~~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
||+++|||+|+||+|++.++++++ .+.+.+.++.....+|. .+..++..+++++|+++||+++|||+||
T Consensus 214 ~~~~~DGAAA~vl~S~~~a~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~E 293 (393)
T cd00826 214 ACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIE 293 (393)
T ss_pred cCCcCCCeEEEEEecHHHHHHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeee
Confidence 999999999999999999999886 34444555444444555 4567788999999999999999999999
Q ss_pred ecCCChHHHHHHHHHcCCCC------------------CCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-----CCC
Q 012522 359 INEAFASQYVYCIKKLGLDP------------------EKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-----GKD 415 (461)
Q Consensus 359 iheafa~~~~~~~e~LGl~~------------------~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-----~~~ 415 (461)
+||+|++++++++|.||||+ .|||++||++++|||.||||+++++|+++||+++ +++
T Consensus 294 i~d~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~g~ag~~q~~~ 373 (393)
T cd00826 294 AHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGEAGKRQGAG 373 (393)
T ss_pred hhhhhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHhhhhccccCCC
Confidence 99999999999999999998 7999999999999999999999999999999987 444
Q ss_pred CCEEEEEecccCcceeEEEEE
Q 012522 416 CRFGVISMCIGSGMGAAAVFE 436 (461)
Q Consensus 416 ~~~gl~~~~~g~G~g~A~v~~ 436 (461)
.++++ .|++||++.++++|
T Consensus 374 ~~~~~--~~~~Gg~g~a~~~~ 392 (393)
T cd00826 374 AGLAL--LCIGGGGGAAMCIE 392 (393)
T ss_pred cCEEE--EEcCCCceeEEEEe
Confidence 44444 45677778888887
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-52 Score=425.31 Aligned_cols=332 Identities=19% Similarity=0.199 Sum_probs=274.8
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
.++|+|||+++|||+|. .+.++.+|+.+|+++||+|+||+++|||.+++.. ... ... ...++..+|+. .
T Consensus 4 ~~~vaIvG~g~t~~~~~-----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~---~~~-~~~-~~~~~~~lGl~-~ 72 (388)
T PRK08142 4 KGKAYIVGAYEHPTRKA-----PDKSVAQLHAEVAKGALADAGLSLADVDGYFCAG---DAP-GLG-PASMVDYLGLK-L 72 (388)
T ss_pred CCCEEEEEEeeccceeC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcC---CCC-Ccc-HHHHHHhCCCC-C
Confidence 35899999999999973 5788899999999999999999999999976521 111 111 13478899994 5
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccc--cCC----C-hhhhhhhcccccCccHHHHHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV--GQV----N-PKVEIFTQARDCLLPMGITSE 200 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~--~~~----~-~~~~~~~~~~~~~~~~g~~a~ 200 (461)
.+...++.+|+|+..+|..|+..|++|.+|+|||+|+|+++....... ..+ . ..|. .+.+......+++.++
T Consensus 73 ~~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~Al~a~ 151 (388)
T PRK08142 73 RHVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFE-APYGPTTHNLYAMCAM 151 (388)
T ss_pred eeeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchh-cccccccHHHHHHHHH
Confidence 788899999999999999999999999999999999999764211100 000 1 1111 1223333346899999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCC
Q 012522 201 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280 (461)
Q Consensus 201 ~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~ 280 (461)
+|+++||+++|+++.+++++|+||..||++ +| |+++|+|+++++|+|.+
T Consensus 152 ~ym~~yG~t~e~la~vav~~~~~A~~NP~A-~~------------------------------r~~~t~e~vl~s~~Ia~ 200 (388)
T PRK08142 152 RHMHEYGTTSEQLAWIKVAASHHAQHNPHA-ML------------------------------RDVVTVEDVLNSPMIAD 200 (388)
T ss_pred HHHHHHCcCHHHHHHHHHHHHHHhccCChh-hc------------------------------CCCCCHHHHhcCCcccC
Confidence 999999999999999999999999999998 33 45789999999999998
Q ss_pred CCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCcc
Q 012522 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDIN 355 (461)
Q Consensus 281 ~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID 355 (461)
| +|.++||+++|||+|+||++++.|++++.++ ++|.+++.... .++........+++++|+++|++++|||
T Consensus 201 P---l~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did 276 (388)
T PRK08142 201 P---LHRLDCCVVTDGGGALVVVRPEIARSLKRPL-VKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIK 276 (388)
T ss_pred C---chhhccCcccCceEEEEEecHHHHhhcCCCC-EEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCC
Confidence 8 9999999999999999999999999997544 69999887532 2333334456899999999999999999
Q ss_pred EEEecCCChHHHHHHHHHcCCCC-------------------CCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc----
Q 012522 356 LFEINEAFASQYVYCIKKLGLDP-------------------EKVNVNGGAVALGHPLGATGARCVATLLSEMKRR---- 412 (461)
Q Consensus 356 ~~eiheafa~~~~~~~e~LGl~~-------------------~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~---- 412 (461)
++|+||+|++.+++++|.||||+ .|||++||.++.|||.|+||+++++|+++|||++
T Consensus 277 ~~elyD~Fs~~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG~ag~~ 356 (388)
T PRK08142 277 YASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGEAHPA 356 (388)
T ss_pred EEEEeccchHHHHHHHHHcCCCCCCchHHHHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999975 3899999999999999999999999999999954
Q ss_pred --CCCCCEEEEEeccc
Q 012522 413 --GKDCRFGVISMCIG 426 (461)
Q Consensus 413 --~~~~~~gl~~~~~g 426 (461)
|++.+++|++.++|
T Consensus 357 rQV~~a~~gl~~~~Gg 372 (388)
T PRK08142 357 VQVPNCDLALAHGTGG 372 (388)
T ss_pred CCCCCCcEEEEeCCCC
Confidence 66789999997655
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-51 Score=410.43 Aligned_cols=327 Identities=17% Similarity=0.173 Sum_probs=262.3
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCH-HHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccch-HHHHHHHHcCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLA-DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAM-ECRMAAFYAGFPE 126 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~-~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~-~a~~ia~~lGl~~ 126 (461)
++|+|||+++|||+|.. .+.+. .||+.+|+++||+|+||+++|||.++.+. .+...+.. ........+|+..
T Consensus 2 ~~vaIvG~g~t~~~~~~----~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~--~~~~~~~~~~~~~~~~~~G~~~ 75 (352)
T PRK07937 2 RDVAVVGFAQAPHVRRT----DGTTNGVEMLMPCFAELYAELGITKSDIGFWCSGS--SDYLAGRAFSFISAIDSIGAVP 75 (352)
T ss_pred CcEEEEEeeccccccCC----CCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc--cccccccccchhhHHhhccCCC
Confidence 68999999999999731 13555 89999999999999999999999886443 23221221 1223445677733
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccc--cccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS--VVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
..|...++ ++|..+|..|++.|++|.+|+|||+|+|+++..... ..... +.+...|.+......+++.+++|++
T Consensus 76 ~~~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~-~~~~~~p~G~~~~~~~Al~a~~ym~ 151 (352)
T PRK07937 76 PINESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQL-DPYTVAPLWPDSVSMAGLQARAGLD 151 (352)
T ss_pred CCceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccC-CcceeccCCCchHHHHHHHHHHHHH
Confidence 34555665 468889999999999999999999999988641110 00011 1111123333334468999999999
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCc
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT 284 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~ 284 (461)
+||.++|+++++++++|+||..||++. +| +|+|+++++|+|.+|
T Consensus 152 ~yG~t~e~lA~vavk~r~nA~~NP~A~-------------------------------~r--it~edvl~s~~ia~P--- 195 (352)
T PRK07937 152 AGKWTEEQMAEVAARSRADARRNPSAE-------------------------------PS--ISVDELLARPYFADP--- 195 (352)
T ss_pred HhCCCHHHHHHHHHHHHHHHhhCchhh-------------------------------cc--CCHHHHhcCCcccCC---
Confidence 999999999999999999999999882 24 899999999999987
Q ss_pred cccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCC---CcHHHHHHHHHHHc-CCCCCCccEEEec
Q 012522 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMG---IGPAVAIPAAVKSA-GLQIDDINLFEIN 360 (461)
Q Consensus 285 lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~---~~~~~ai~~aL~~A-Gl~~~DID~~eih 360 (461)
+|.++||+++|||+|+||++++.|++++.+| ++|.+++.....+ .+. .....+++++++++ |++++|||++|+|
T Consensus 196 L~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~~~~-~~~~~d~~~~~~~~~a~~~aAgi~~~diD~~Ei~ 273 (352)
T PRK07937 196 LRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRIESP-SLGARDLTRSPSTALAAEAATGGDAGGVDVAELH 273 (352)
T ss_pred chhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEeeCCc-cccccccccHHHHHHHHHHhcCCCHHHCCEEEEe
Confidence 9999999999999999999999999999888 7999998854322 222 33456677788885 9999999999999
Q ss_pred CCChHHHHHHHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEeccc
Q 012522 361 EAFASQYVYCIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIG 426 (461)
Q Consensus 361 eafa~~~~~~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g 426 (461)
|+|+++++.++|.|||+. .|||++||.++ |||.|+||+++++|+++||+++ +.+++|++..+|
T Consensus 274 D~F~~~~l~~~e~lGl~g~~pvN~~GG~l~-ghp~gatG~~~~~e~~~QL~g~--~a~~~l~~~~Gg 337 (352)
T PRK07937 274 APFTHQELILREALGLGDKTKVNPSGGALA-ANPMFAAGLERIGEAARHIWDG--SARRALAHATSG 337 (352)
T ss_pred CCChHHHHHHHHHcCCCCCCCcCCCccchh-cCchhHHHHHHHHHHHHHHhcc--CCCEEEEecccc
Confidence 999999999999999965 69999999999 9999999999999999999999 899999997655
|
|
| >KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-53 Score=396.34 Aligned_cols=377 Identities=35% Similarity=0.526 Sum_probs=331.6
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
+..|++|...||||.-+ .-.++++-+.||+.++.+..|++..++.+.+|.||+|++..+.- ..+++|..++..|++..
T Consensus 41 ~~nivlvdgvrtpfl~s-gt~ykdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevk-tsniareaal~agfsdk 118 (465)
T KOG1392|consen 41 MPNIVLVDGVRTPFLVS-GTVYKDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVK-TSNIAREAALLAGFSDK 118 (465)
T ss_pred CCceEEEecccCceeec-ccchhhhchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHh-cchHHHHHHHhcCCCCC
Confidence 78999999999999753 23488999999999999999999999999999999999988765 78999999999999989
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccC-------------CChh------hhhh---
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ-------------VNPK------VEIF--- 185 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~-------------~~~~------~~~~--- 185 (461)
.|..+|..+|-|..+|+.....+|++|.+|+++++|+|.||.+|+++... ++.. +..+
T Consensus 119 tpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~nfla 198 (465)
T KOG1392|consen 119 TPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKNFLA 198 (465)
T ss_pred CccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhhccC
Confidence 99999999999999999999999999999999999999999999975321 1111 1111
Q ss_pred hc-----ccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeecc
Q 012522 186 TQ-----ARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVD 260 (461)
Q Consensus 186 ~~-----~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~d 260 (461)
|+ .......||..+.+++..|++||.|||+|+.++|.-|.++++.|+|.+ ++|+.+.-++| .+.+|
T Consensus 199 pelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftd-vvpfkv~gkd~--------~t~kd 269 (465)
T KOG1392|consen 199 PELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTD-VVPFKVDGKDP--------KTIKD 269 (465)
T ss_pred cCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccc-eeeEecCCCCc--------ceecC
Confidence 11 123446799999999999999999999999999999999999999976 77888765554 34589
Q ss_pred CCCCCCCCHHHHhccCCCCC-CCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC-CCCCcHHH
Q 012522 261 DGIRPNTTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS-VMGIGPAV 338 (461)
Q Consensus 261 e~~r~~~t~e~l~~~~pvf~-~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-~~~~~~~~ 338 (461)
+++|. .++|++.+++|.|- |.|++|..|+|-+.|||.|++++.++.|...|.+|-+++..+-....+|. ..-.+|+.
T Consensus 270 ngirv-ssle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllgpay 348 (465)
T KOG1392|consen 270 NGIRV-SSLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLGPAY 348 (465)
T ss_pred CCccc-CCHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheeccccc
Confidence 99995 89999999999996 59999999999999999999999999999999999999888888777775 45578999
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHc----------CCC-------CCCcCCCCCcccccCchhhHHHHH
Q 012522 339 AIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKL----------GLD-------PEKVNVNGGAVALGHPLGATGARC 401 (461)
Q Consensus 339 ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~L----------Gl~-------~~~vn~~GG~~~~Ghp~gatG~~~ 401 (461)
+++++|+++|++..|||.||+||+|+.+.+...+++ |.. .+++|.+||.+++|||.|+||.+.
T Consensus 349 ~ipkll~kagltlkdid~feiheafagqilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatgvrl 428 (465)
T KOG1392|consen 349 VIPKLLDKAGLTLKDIDVFEIHEAFAGQILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATGVRL 428 (465)
T ss_pred ccHHHHHHcCCcccccchhhhHHHHhHHHHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccchhh
Confidence 999999999999999999999999999988655554 322 258899999999999999999999
Q ss_pred HHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEEc
Q 012522 402 VATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 402 ~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
.....+.|+++ ++++|++..|..||+|.++++|.-
T Consensus 429 ~mh~anrl~~e--~gqygvvaacaaggqgvamlieay 463 (465)
T KOG1392|consen 429 AMHSANRLKEE--KGQYGVVAACAAGGQGVAMLIEAY 463 (465)
T ss_pred HHHHHhHHHhh--cCceeEeehhhcCCcceEEEeecc
Confidence 99999999999 999999999999999999999863
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-49 Score=405.93 Aligned_cols=338 Identities=15% Similarity=0.134 Sum_probs=270.4
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
.++|+|||++.|||+|. .+.++.+|+.+|+++||+|+||+++|||.+++++. . .. . ...++..+|++..
T Consensus 3 ~~~v~IvG~g~t~~~r~-----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~-~~--~--~~~l~~~lGl~~~ 71 (386)
T PRK07855 3 SGKAAIVGIGATEFSKN-----SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTM-D-TN--P--EIAVARALGIGEL 71 (386)
T ss_pred CCCEEEEEeeecccccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-c-cc--c--HHHHHHHCCCCCC
Confidence 46899999999999873 47789999999999999999999999999987432 1 11 1 2457889999533
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEee--cccccc-ccc---cc-----cCCChhhhhhhccc-ccCccH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGL--ESMTVN-SIS---VV-----GQVNPKVEIFTQAR-DCLLPM 195 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~--E~~s~~-~~~---~~-----~~~~~~~~~~~~~~-~~~~~~ 195 (461)
.+...|+.+|+|+..+|..|++.|++|.+|+|||+|. |..... ... .. ......|.. +.+. .+...+
T Consensus 72 ~~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~ 150 (386)
T PRK07855 72 KFFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSY-PHGLLTPAAWV 150 (386)
T ss_pred cceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhh-hcCCCChHHHH
Confidence 5667899999999999999999999999999999998 322110 000 00 000111211 2221 122358
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhcc
Q 012522 196 GITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKL 275 (461)
Q Consensus 196 g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~ 275 (461)
++.+++|+++||+++|+++++++++|+||.+||++. |+ |+++|+|+++++
T Consensus 151 al~a~~ym~~~G~t~e~lA~vavk~~~~A~~NP~A~-~~-----------------------------~~~~t~e~vl~s 200 (386)
T PRK07855 151 AMLARRYMHEYGATSEDFGRVAVADRKHAATNPKAW-FY-----------------------------GRPITLEDHQNS 200 (386)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHhcChHhh-hc-----------------------------CCCCCHHHHhcC
Confidence 999999999999999999999999999999999983 21 246999999999
Q ss_pred CCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCC---------CCCC--CcHHHHHHHHH
Q 012522 276 KPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP---------SVMG--IGPAVAIPAAV 344 (461)
Q Consensus 276 ~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p---------~~~~--~~~~~ai~~aL 344 (461)
|+|.+| +|.++||+++|||+|+||++++.|++++.+|. +|.+++...... ..+. .....+++++|
T Consensus 201 ~~Ia~P---l~~~d~~~~sDGAaAvvl~see~A~~l~~~pv-~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~ 276 (386)
T PRK07855 201 RWIAEP---LRLLDCCQESDGAVALVVTSAERARDLKQRPA-VIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLW 276 (386)
T ss_pred CcccCC---chhhhcCCcCCceEEEEEecHHHHhhCCCCCE-EEEEEEEecCCccccccccccccccccchHHHHHHHHH
Confidence 999977 99999999999999999999999999988885 999987743211 0111 12347999999
Q ss_pred HHcCCCCCCccEEEecCCChHHHHHHHHHcCCCC------------------CCcCCCCCcccccCchhhHHHHHHHHHH
Q 012522 345 KSAGLQIDDINLFEINEAFASQYVYCIKKLGLDP------------------EKVNVNGGAVALGHPLGATGARCVATLL 406 (461)
Q Consensus 345 ~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~------------------~~vn~~GG~~~~Ghp~gatG~~~~~~~~ 406 (461)
+++|++++|||++|+||+|+++++.++|.||||+ .|||++||.++.|||. |+.+++|++
T Consensus 277 ~~AGi~~~DiDv~El~D~Ft~~~l~~~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~~gh~~---G~~~i~E~~ 353 (386)
T PRK07855 277 AQSGLGPADIDTAILYDHFTPFVLMQLEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLGEAYIH---GMNGIAEAV 353 (386)
T ss_pred HHcCCCHHHCcEEEeccCCcHHHHHHHHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccccCchh---hHHHHHHHH
Confidence 9999999999999999999999999999999996 3899999999999987 888999999
Q ss_pred HHHHcc----CCCCCEEEEEecccCcceeEEEE
Q 012522 407 SEMKRR----GKDCRFGVISMCIGSGMGAAAVF 435 (461)
Q Consensus 407 ~~L~~~----~~~~~~gl~~~~~g~G~g~A~v~ 435 (461)
+|||++ |++.+++|++..+|. .+.++||
T Consensus 354 ~QLrG~a~~QV~~a~~gl~~~~Gg~-~~~~~~~ 385 (386)
T PRK07855 354 RQLRGTSVNQVPGVENVLVTAGTGV-PTSGLIL 385 (386)
T ss_pred HHHhCCCcccCCCCcEEEEECCCCc-cceeEEe
Confidence 999976 778999999975433 4555655
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-49 Score=387.05 Aligned_cols=252 Identities=46% Similarity=0.672 Sum_probs=209.6
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
|++||||++.||||++ +.|+|++.++.||+.++++++|++++|+|++||.|++|++.+... ++++++.+++.+|+|..
T Consensus 1 M~~v~Iv~a~RTPfg~-~~G~l~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~-g~~~ar~~~l~aGl~~~ 78 (264)
T PF00108_consen 1 MRDVVIVGAVRTPFGK-FGGSLADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGE-GQNIARQAALAAGLPES 78 (264)
T ss_dssp -TTEEEEEEEEE--EC-TTSTTTTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTT-TCHHHHHHHHHTTS-TT
T ss_pred CCCEEEEEeeeCcccc-CCCccCCCCHHHHHHHHHHHHHHhcccchhhhhhcCccccccccc-chhhhhhhhhhcccccc
Confidence 5799999999999996 789999999999999999999999999999999999999999887 89999999999999988
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccc-----cCCCh------hhhhhhcccccCccHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV-----GQVNP------KVEIFTQARDCLLPMG 196 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~-----~~~~~------~~~~~~~~~~~~~~~g 196 (461)
+|.++|+++|+||++||.+|+..|++|++|++|++|+|+||+.|+... ..++. .+.....++.+..+|+
T Consensus 79 vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~Mg 158 (264)
T PF00108_consen 79 VPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVPMGLSSRRWGAPLGDAKLEDSLLRDGLYDPYAGQPMG 158 (264)
T ss_dssp SEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSCEEECCTTSTSSSSGEEEEEHHHHHTTCCTTTTSHHH
T ss_pred cceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccccccccccccccccCccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999887541 22322 1222233556678899
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccC
Q 012522 197 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK 276 (461)
Q Consensus 197 ~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~ 276 (461)
+++|+++++||||||+||+||++||+||.++++.|+|++||+|++++.++ .++.+++.||++|+.+|+|+|.++|
T Consensus 159 ~tAE~~a~~ygisRee~D~~A~~Sh~rA~~A~~~G~f~~eIvpv~~~~~~-----g~~~~~~~De~~r~~~~~e~l~~L~ 233 (264)
T PF00108_consen 159 ITAENLAKKYGISREEQDEYAVRSHQRAAAAQDEGRFDDEIVPVEVPDKK-----GEEVTVDRDEGIRPDTTLEKLAKLK 233 (264)
T ss_dssp HHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTTTBE-EEEEETT-----SEEEEE-S-STCGTT--HHHHHTS-
T ss_pred cccccccccCCcCHHHHhhhhhcCHHHHHHhccccchhhheeeEeeeccc-----cceeeeeccchhhcchhHHHHhccc
Confidence 99999999999999999999999999999999999999999999885422 2336899999999999999999999
Q ss_pred CCCCCC-CccccCCCCcccccceEEEEcchh
Q 012522 277 PAFKKD-GTTTAGNASQVSDGAGAVLLMKRS 306 (461)
Q Consensus 277 pvf~~~-g~lt~~~~~~~~DGAaAvvL~s~~ 306 (461)
|+|.++ |++|.+|+|+++|||+++||++++
T Consensus 234 p~f~~~~G~vTagnss~~~DGAaa~~l~see 264 (264)
T PF00108_consen 234 PAFRKDGGTVTAGNSSPLNDGAAAVLLMSEE 264 (264)
T ss_dssp BSSSTTTSS-BTTTB--BEEEEEEEEEEEHH
T ss_pred ccccccccccccccCCCccchhheEEEeecC
Confidence 999987 999999999999999999999975
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-47 Score=401.65 Aligned_cols=348 Identities=18% Similarity=0.150 Sum_probs=276.5
Q ss_pred CCcEEEEeeeeccccccCCCCCCC--CCHHHHHHHHHHHHHHHcCCC--cCCcCeEEEEeecCCCCccchHHHHHHHHcC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKD--TLADDLLAPVLKAVIEKTRLN--PSEVGDIVVGTVLAPGSTRAMECRMAAFYAG 123 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~--~~~~eL~~~A~~~AL~~agl~--~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lG 123 (461)
++.++|||+++|+|++.. .+ .++.+|+.+|+++||+|+|++ +++||.+++++..... ..+.+..++..+|
T Consensus 3 ~~~~~IVGvG~t~~~~~~----~~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~--~~~~~~~la~~lG 76 (498)
T PRK08257 3 PRTPVIVGVGQVTERPDD----PAYGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWR--YRDPPGLLAERLG 76 (498)
T ss_pred CCcEEEEEeeecccccCC----cccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEecccccc--ccCHHHHHHHHcC
Confidence 678999999999998631 12 388999999999999999999 9999999998765432 2345678999999
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc--cc--CCC------------------hh
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV--VG--QVN------------------PK 181 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~--~~--~~~------------------~~ 181 (461)
+. ..+......+|.++..+|..|+..|++|++|+|||+|+|+++..+... +. .+. ..
T Consensus 77 l~-p~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (498)
T PRK08257 77 AD-PARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASP 155 (498)
T ss_pred CC-CcceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccch
Confidence 94 355566778888999999999999999999999999999987542100 00 000 01
Q ss_pred hhhhhcc-cccCccHHHHHHHHHHHhCCCHHH-HH---HHHHHHHHHHHHhhhCCCCccccccccccccCCCCCccccee
Q 012522 182 VEIFTQA-RDCLLPMGITSENVAQRFGVTRQE-QD---LAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVT 256 (461)
Q Consensus 182 ~~~~~~~-~~~~~~~g~~a~~~~~~~g~sre~-~~---~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~ 256 (461)
+.. +.+ ..+...+++.+++|+++||+|+|+ ++ .++++++++|++||++ ||
T Consensus 156 ~e~-~~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A-~~----------------------- 210 (498)
T PRK08257 156 AEL-RHGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHA-WI----------------------- 210 (498)
T ss_pred hhh-hcCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHH-hh-----------------------
Confidence 111 111 112345899999999999999998 33 4445899999999988 33
Q ss_pred eeccCCCCCCCCHHHHh----ccCCCCCCCCccccCCCCc-ccccceEEEEcchhHHHhcCCC--eeEEEEEeeeeccCC
Q 012522 257 ISVDDGIRPNTTIADLA----KLKPAFKKDGTTTAGNASQ-VSDGAGAVLLMKRSLAVQKGLP--ILGVFRSFSAVGVDP 329 (461)
Q Consensus 257 v~~de~~r~~~t~e~l~----~~~pvf~~~g~lt~~~~~~-~~DGAaAvvL~s~~~A~~~g~~--~~a~i~g~~~~~~~p 329 (461)
|+++|+|+++ ++|+|.+| +|+++||+ .+|||+|+||++++.|++++.+ ...++.+++......
T Consensus 211 -------r~~~t~eevl~~~~~~rmIa~P---l~~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~ 280 (498)
T PRK08257 211 -------PRERSAEEIVTPTPDNRMIAWP---YTKLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPY 280 (498)
T ss_pred -------CCCCCHHHHhcccCCCCeeeCC---ccHhhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCcc
Confidence 4568999998 68888877 89999996 8999999999999999999842 235888887764321
Q ss_pred -----CCCCCcH--HHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCC---CcCCCCCcccccCchhhHHH
Q 012522 330 -----SVMGIGP--AVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPE---KVNVNGGAVALGHPLGATGA 399 (461)
Q Consensus 330 -----~~~~~~~--~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~---~vn~~GG~~~~Ghp~gatG~ 399 (461)
..+...+ ..+++++|+++|++++|||++|+||||++.+++++|.||||+. |+|++||++++|||.|++|+
T Consensus 281 ~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~ 360 (498)
T PRK08257 281 DILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVT 360 (498)
T ss_pred ccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHH
Confidence 1122222 4699999999999999999999999999999999999999987 89999999999999999999
Q ss_pred HHHHHHHHHHHccCCCCCEEEEEecccCcc-eeEEEEEEcc
Q 012522 400 RCVATLLSEMKRRGKDCRFGVISMCIGSGM-GAAAVFERGD 439 (461)
Q Consensus 400 ~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~-g~A~v~~~~~ 439 (461)
++++|+++|||++ +.++||++.++|.+. ....|+.++.
T Consensus 361 ~~i~E~v~QLRg~--~~~~gLv~~~GG~~~~~~~~vl~~~p 399 (498)
T PRK08257 361 HAIAEMVERLRAN--PGRRGLVTANGGYLTKHSVGVYSTEP 399 (498)
T ss_pred HHHHHHHHHHhhc--CCCEEEEECCCChhhceEEEEEeCCC
Confidence 9999999999998 899999998665443 3455666664
|
|
| >KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-48 Score=355.92 Aligned_cols=340 Identities=23% Similarity=0.335 Sum_probs=282.9
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
+-+|+|||+++|.|.++ |+..+.+..||+.+|+..||+|+++..++|+.-++|.+.++..+++ ..-..+|+ +.
T Consensus 5 ~~rvyvvgvgmtkf~kp--g~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdstcgq----raiyevgm-tg 77 (408)
T KOG1406|consen 5 KPRVYVVGVGMTKFEKP--GRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDSTCGQ----RAIYEVGM-TG 77 (408)
T ss_pred CceEEEEecceeeecCC--CcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCccch----HHHHhccc-cC
Confidence 45899999999999985 6778889999999999999999999999999999999999887554 23347888 57
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccc--ccc---CCChhhhh------hhcccccCccHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS--VVG---QVNPKVEI------FTQARDCLLPMG 196 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~--~~~---~~~~~~~~------~~~~~~~~~~~g 196 (461)
.|.+.||+.|++|..+|.+|.+.|++|.+|+||+.|+|+|++.... +.. .....+.. ....+-...+||
T Consensus 78 ipi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqmfg 157 (408)
T KOG1406|consen 78 IPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQMFG 157 (408)
T ss_pred cceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHHhh
Confidence 8999999999999999999999999999999999999999985441 110 11111111 111233345789
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccC
Q 012522 197 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK 276 (461)
Q Consensus 197 ~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~ 276 (461)
.....+|++||-.+|+++.++-++|.+...||.+ .|+ ..+++|++.+++
T Consensus 158 nagkehmekygtk~ehfakiawknhkhsvnnpys-qf~------------------------------deysldqvm~s~ 206 (408)
T KOG1406|consen 158 NAGKEHMEKYGTKPEHFAKIAWKNHKHSVNNPYS-QFR------------------------------DEYSLDQVMKSP 206 (408)
T ss_pred hhHHHHHHHhCCCHHHHhHhhhhccccccCChhH-hhh------------------------------hhccHHHHhcch
Confidence 9999999999999999999999999999999987 343 348999999999
Q ss_pred CCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCee-EEEEEeeeeccCCCCC---------CCc-HHHHHHHHHH
Q 012522 277 PAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPIL-GVFRSFSAVGVDPSVM---------GIG-PAVAIPAAVK 345 (461)
Q Consensus 277 pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~-a~i~g~~~~~~~p~~~---------~~~-~~~ai~~aL~ 345 (461)
-+|| ++|.+.|||.+|||+|.||.++...+++++.-. .+|++.......|..+ +.. ...+.+++++
T Consensus 207 ~v~d---flt~lqccptsdgaaaailaseafv~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~a 283 (408)
T KOG1406|consen 207 QVVD---FLTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFA 283 (408)
T ss_pred HHHH---HHHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHH
Confidence 9985 699999999999999999999999999987632 2566655554444322 222 2478999999
Q ss_pred HcCCCCCCccEEEecCCChHHHHHHHHHcCCCCC------------------CcCCCCCcccccCchhhHHHHHHHHHHH
Q 012522 346 SAGLQIDDINLFEINEAFASQYVYCIKKLGLDPE------------------KVNVNGGAVALGHPLGATGARCVATLLS 407 (461)
Q Consensus 346 ~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~------------------~vn~~GG~~~~Ghp~gatG~~~~~~~~~ 407 (461)
+.|++|.||+++|+||||+..+++.+|+||||++ -+||+||+++-|||+||||+.|.+|+.|
T Consensus 284 ksgltpndvqvielhdcfs~nelityealglcpegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcaelcw 363 (408)
T KOG1406|consen 284 KSGLTPNDVQVIELHDCFSANELITYEALGLCPEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCW 363 (408)
T ss_pred HcCCCcccceEEEeecccchhhhhhHHHhcCCCCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHH
Confidence 9999999999999999999999999999999973 4899999999999999999999999999
Q ss_pred HHHcc-----CCCCCEEEEEecccCc
Q 012522 408 EMKRR-----GKDCRFGVISMCIGSG 428 (461)
Q Consensus 408 ~L~~~-----~~~~~~gl~~~~~g~G 428 (461)
|||+. ||++++++-+..+=||
T Consensus 364 qlrg~agkrqvpnakvalqhnlgigg 389 (408)
T KOG1406|consen 364 QLRGLAGKRQVPNAKVALQHNLGIGG 389 (408)
T ss_pred HHhhhhccccCCCchhhhhhccCcCc
Confidence 99976 8999999988653344
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-29 Score=239.93 Aligned_cols=238 Identities=28% Similarity=0.316 Sum_probs=207.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAI 151 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I 151 (461)
.+..+|+.+|++++|+++|++++|||.|++++..++.. .+..+..++..+|++ +.+.++++.+|+|++.||..|+++|
T Consensus 5 ~~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~-~~~~a~~i~~~lg~~-~~~~~~i~~~C~s~~~al~~A~~~i 82 (254)
T cd00327 5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGE-FSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQQV 82 (254)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCcc-ccHHHHHHHHHhCCC-CCCcceeccHhHHHHHHHHHHHHHH
Confidence 45889999999999999999999999999999988764 577888999999996 7899999999999999999999999
Q ss_pred HcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCC
Q 012522 152 KAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231 (461)
Q Consensus 152 ~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag 231 (461)
++|++|.+||+|+|. .
T Consensus 83 ~~g~~~~~lv~~~e~--~-------------------------------------------------------------- 98 (254)
T cd00327 83 QNGKADIVLAGGSEE--F-------------------------------------------------------------- 98 (254)
T ss_pred HCCCCCEEEEEecce--e--------------------------------------------------------------
Confidence 999999999999765 1
Q ss_pred CCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhc
Q 012522 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQK 311 (461)
Q Consensus 232 ~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~ 311 (461)
+ ++|||+|+||++++.++++
T Consensus 99 -----------------------------------------------------~-------~gdGAaa~vL~~~~~a~~~ 118 (254)
T cd00327 99 -----------------------------------------------------V-------FGDGAAAAVVESEEHALRR 118 (254)
T ss_pred -----------------------------------------------------e-------ecceEEEEEECcHHHHHHC
Confidence 1 6999999999999999998
Q ss_pred CCCeeEEEEEeeeeccCCC----CCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCc---CCC
Q 012522 312 GLPILGVFRSFSAVGVDPS----VMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKV---NVN 384 (461)
Q Consensus 312 g~~~~a~i~g~~~~~~~p~----~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~v---n~~ 384 (461)
+.+++.++.++......+. .....+..+++++|+++|++++|||+|++|+++........+.++++..+. |+.
T Consensus 119 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (254)
T cd00327 119 GAHPQAEIVSTAATFDGASMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVS 198 (254)
T ss_pred CCceEEEEEEEEEcCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCcee
Confidence 9899999999876544332 234466789999999999999999999999999998888888898886554 789
Q ss_pred CCcccccCchhhHHHHHHHHHHHHHHcc-CC----CCCEEEEEecccCcceeEEEE
Q 012522 385 GGAVALGHPLGATGARCVATLLSEMKRR-GK----DCRFGVISMCIGSGMGAAAVF 435 (461)
Q Consensus 385 GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~----~~~~gl~~~~~g~G~g~A~v~ 435 (461)
++...+||+.++++...+.+++.+++.+ +| +.++.++.+++.||.+.+++|
T Consensus 199 ~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 199 ATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred ccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 9999999999999999999999999875 22 467888888877887777764
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-30 Score=219.61 Aligned_cols=123 Identities=51% Similarity=0.875 Sum_probs=110.3
Q ss_pred CCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccC
Q 012522 313 LPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGH 392 (461)
Q Consensus 313 ~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Gh 392 (461)
++|++++.++...+.+|..++.++..+++++|+++|++++|||+||+||+|+.+.+.++|.||++++|||++||.+++||
T Consensus 1 l~pla~i~~~~~~~~~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la~GH 80 (123)
T PF02803_consen 1 LKPLARIVGYASAGVDPEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALALGH 80 (123)
T ss_dssp --ESEEEEEEEEEE--GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHHH-B
T ss_pred CCeEEEEEEEEEEecCHHHhCchHHHHHHHHHHHhCCCccccchhhccchhhhHHHHhhccccccccccCcccccccccc
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 393 PLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 393 p~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|.|+||+++++++++||+++ +.+++++++|+|||++.|++|||
T Consensus 81 P~gasG~r~~~~l~~~L~~~--~~~~gla~~~~ggG~g~a~ller 123 (123)
T PF02803_consen 81 PLGASGARLVVELAHQLRRR--GGRYGLAAICAGGGQGSAVLLER 123 (123)
T ss_dssp HTTTHHHHHHHHHHHHHHHH--TTSEEEEEEEETTTEEEEEEEEE
T ss_pred cccccccchhhhhHHHHHHh--chhhhhHHhcccceeeEEEEEEC
Confidence 99999999999999999999 99999999999999999999997
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=247.18 Aligned_cols=270 Identities=23% Similarity=0.319 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCe----EEEEeecCCCC-------------------------ccchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGS-------------------------TRAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~----vi~g~~~~~~~-------------------------~~~~~a~~ia~~lGl 124 (461)
..+|+.+++++||+++|++++++|. +++|+..+... .....+..++..+|+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 3679999999999999999999987 66665322110 011245568889998
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
.+|.++++++|+|++.||..|++.|++|++|++||+|+|.+.. |. ...++.+
T Consensus 151 --~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~-~~--------------------~~~~~~~----- 202 (407)
T TIGR03150 151 --KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAIT-PL--------------------GIAGFAA----- 202 (407)
T ss_pred --CCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCC-HH--------------------HHHHHHH-----
Confidence 6899999999999999999999999999999999999998654 10 0000000
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--C
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D 282 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~ 282 (461)
.+.+.. ...+| + ..++| |+. +
T Consensus 203 -------------------------~~~ls~-------~~~~~------------~------------~~~~p-fd~~~~ 225 (407)
T TIGR03150 203 -------------------------MKALST-------RNDDP------------E------------KASRP-FDKDRD 225 (407)
T ss_pred -------------------------hCcccC-------CCCCC------------C------------cCCCC-CcCCCC
Confidence 000000 00000 0 02345 543 5
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
|++ ++|||+++||++++.|+++|.+++++|.+++.... .|...+.+...+++++|+++|++++|||++
T Consensus 226 g~~-------~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~v 298 (407)
T TIGR03150 226 GFV-------MGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYI 298 (407)
T ss_pred cEE-------EeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEE
Confidence 666 89999999999999999999999999999887653 233344567899999999999999999999
Q ss_pred EecCCCh----HHHHHHH-HHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC-----------------
Q 012522 358 EINEAFA----SQYVYCI-KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK----------------- 414 (461)
Q Consensus 358 eiheafa----~~~~~~~-e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~----------------- 414 (461)
|.|++++ ..+...+ +.++-...+++++..+..+|||.||+|+.+++.++++|+++ +|
T Consensus 299 e~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v 378 (407)
T TIGR03150 299 NAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDYV 378 (407)
T ss_pred eCcCCCCCCCCHHHHHHHHHHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccc
Confidence 9999999 4555444 44454433455555556679999999999999999999985 10
Q ss_pred -------CCCEEEEEecccCcceeEEEE
Q 012522 415 -------DCRFGVISMCIGSGMGAAAVF 435 (461)
Q Consensus 415 -------~~~~gl~~~~~g~G~g~A~v~ 435 (461)
..+++++++++-||.+.++||
T Consensus 379 ~~~~~~~~~~~~l~~s~gfgG~n~~~vl 406 (407)
T TIGR03150 379 PNEARERKIDYALSNSFGFGGHNASLVF 406 (407)
T ss_pred CCCCccCCcCEEEEecccCCCceEEEEe
Confidence 236788888777777777776
|
FabB sequences should fall well below the noise cutoff of this model. |
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-27 Score=244.59 Aligned_cols=273 Identities=24% Similarity=0.312 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCC----------------------C---ccchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPG----------------------S---TRAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~----------------------~---~~~~~a~~ia~~lGl 124 (461)
..+|+.+++++||+|+|++++++| ++++|+..+.. . .....+.+++..+|+
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (411)
T PRK07314 72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA 151 (411)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence 467899999999999999999988 56777643210 0 011245678889998
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
.+|.++++.+|+|++.||..|+++|++|++|++||+|+|.++.... ..++.
T Consensus 152 --~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~---------------------~~~~~------ 202 (411)
T PRK07314 152 --KGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLG---------------------IAGFA------ 202 (411)
T ss_pred --CCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHH---------------------HHHHH------
Confidence 6899999999999999999999999999999999999998654100 00000
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--C
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D 282 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~ 282 (461)
+.+. +. ....+| +. .++| ||. |
T Consensus 203 -------------------~~~~-----ls-------~~~~~p------------~~------------~~~p-fd~~~d 226 (411)
T PRK07314 203 -------------------AARA-----LS-------TRNDDP------------ER------------ASRP-FDKDRD 226 (411)
T ss_pred -------------------Hhcc-----cc-------CCCCCC------------Cc------------CcCC-CcCCCC
Confidence 0000 00 000001 11 2344 554 4
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeec-----cCCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~-----~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
|++ ++|||+++||++++.|++++.+++++|.|++... ..|...+.+...+++++|+++|++++|||++
T Consensus 227 G~~-------~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v 299 (411)
T PRK07314 227 GFV-------MGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYI 299 (411)
T ss_pred CEe-------EEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 555 8999999999999999999999999999998765 2444455667899999999999999999999
Q ss_pred EecCCCh-HHHHHHH----HHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC-----------------
Q 012522 358 EINEAFA-SQYVYCI----KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK----------------- 414 (461)
Q Consensus 358 eiheafa-~~~~~~~----e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~----------------- 414 (461)
|.|..++ ....... +.++....++++++.+..+|||.+|+|+.+++.++.+|+.+ +|
T Consensus 300 ~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~ 379 (411)
T PRK07314 300 NAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYV 379 (411)
T ss_pred EccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcccc
Confidence 9998887 2222222 33444445677777778889999999999999999999987 11
Q ss_pred -------CCCEEEEEecccCcceeEEEEEEc
Q 012522 415 -------DCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 415 -------~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+.+++++++++.||.+.++||++.
T Consensus 380 ~~~~~~~~~~~al~~s~gfGG~n~~~vl~~~ 410 (411)
T PRK07314 380 PNEARERKIDYALSNSFGFGGTNASLVFKRY 410 (411)
T ss_pred CCcccCCCCCEEEEecccCCCceEEEEEecC
Confidence 346788888888889999999864
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=248.49 Aligned_cols=272 Identities=19% Similarity=0.316 Sum_probs=204.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCc-C----eEEEEeecCCCC-------------------------ccchHHHHHHHHcCC
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEV-G----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGF 124 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~I-d----~vi~g~~~~~~~-------------------------~~~~~a~~ia~~lGl 124 (461)
..|+..++++||+++|++++++ + ++++|+..+... .....+..++..+|+
T Consensus 83 ~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 162 (424)
T PRK06333 83 ILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGF 162 (424)
T ss_pred HHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhCC
Confidence 5688999999999999988776 3 567776533210 001245578889999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
++|+++++++|+|++.||..|+++|++|++|++||+|+|.+.. +. .+
T Consensus 163 --~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~-~~-----------------------~~------- 209 (424)
T PRK06333 163 --KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAID-RV-----------------------SL------- 209 (424)
T ss_pred --CCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HH-----------------------HH-------
Confidence 6899999999999999999999999999999999999998654 00 00
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--C
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D 282 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~ 282 (461)
..+.. .+.+... .. .++++ .++| ||. +
T Consensus 210 --------------~~f~~------~~~l~~~------~~------------~~p~~------------~~~P-fd~~~~ 238 (424)
T PRK06333 210 --------------AGFAA------ARALSTR------FN------------DAPEQ------------ASRP-FDRDRD 238 (424)
T ss_pred --------------HHHHH------ccccccc------CC------------CCCCc------------CCCC-CCCCCC
Confidence 00000 0000000 00 00011 3566 765 7
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
|++ ++|||+++||++.+.|+++|.+++++|.|++.... .|...+.+...+++++|+++|++++|||++
T Consensus 239 G~~-------~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId~i 311 (424)
T PRK06333 239 GFV-------MGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQHL 311 (424)
T ss_pred CeE-------EecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 877 89999999999999999999999999999988653 233334567899999999999999999999
Q ss_pred EecCCChH----HHHHHHH-HcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C------------------
Q 012522 358 EINEAFAS----QYVYCIK-KLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G------------------ 413 (461)
Q Consensus 358 eiheafa~----~~~~~~e-~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~------------------ 413 (461)
|.|.+++. .++..++ .+| ...++++++++..+||+.||+|+.+++.++.+|+++ +
T Consensus 312 ~~hgtgt~~~D~~E~~al~~~fg-~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~~~ 390 (424)
T PRK06333 312 NAHATSTPVGDLGEVAAIKKVFG-HVSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDV 390 (424)
T ss_pred eccCCCCccchHHHHHHHHHHhC-CCCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCcccccc
Confidence 99999987 5555444 344 345789999999999999999999999999999984 1
Q ss_pred -------CCCCEEEEEecccCcceeEEEEEEc
Q 012522 414 -------KDCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 414 -------~~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
...+++++++.+-||.+.++||++.
T Consensus 391 ~~~~~~~~~~~~al~~s~gfGG~n~~~il~~~ 422 (424)
T PRK06333 391 VANKARPMDMDYALSNGFGFGGVNASILFRRW 422 (424)
T ss_pred ccCCCcccCcCEEEEeeecCCCeeEEEEEecc
Confidence 1346788888777888889988764
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-26 Score=237.23 Aligned_cols=276 Identities=20% Similarity=0.285 Sum_probs=203.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCC-cCCcCeEEEEeecCCCCc-----------------------------cchHHHHHHH
Q 012522 71 DTLADDLLAPVLKAVIEKTRLN-PSEVGDIVVGTVLAPGST-----------------------------RAMECRMAAF 120 (461)
Q Consensus 71 ~~~~~eL~~~A~~~AL~~agl~-~~~Id~vi~g~~~~~~~~-----------------------------~~~~a~~ia~ 120 (461)
+....+|+..++++||+++|++ +++++...+|.+.+.... ...++..++.
T Consensus 74 ~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~ 153 (421)
T PTZ00050 74 ESRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAI 153 (421)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHH
Confidence 4455889999999999999998 777775544444332210 0124567888
Q ss_pred HcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHH
Q 012522 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSE 200 (461)
Q Consensus 121 ~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~ 200 (461)
.+|+ ++|+++++++|+|++.||..|++.|++|++|++||+|+|.+.. |. .
T Consensus 154 ~~~l--~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~-p~-----------------------~---- 203 (421)
T PTZ00050 154 KHKL--KGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASIT-PV-----------------------S---- 203 (421)
T ss_pred HhCC--CCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCC-HH-----------------------H----
Confidence 8999 7899999999999999999999999999999999999998553 11 0
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCC
Q 012522 201 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280 (461)
Q Consensus 201 ~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~ 280 (461)
...+.+. +.+.... ..+++. .++| |+
T Consensus 204 -----------------~~~f~~~------~~l~~~~------------------~~~p~~------------~~~p-fd 229 (421)
T PTZ00050 204 -----------------FAGFSRM------RALCTKY------------------NDDPQR------------ASRP-FD 229 (421)
T ss_pred -----------------HHHHHhh------hccccCc------------------CCCCCc------------cCCC-Cc
Confidence 0000000 0000000 000011 2345 66
Q ss_pred C--CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHH-cCCCCC
Q 012522 281 K--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKS-AGLQID 352 (461)
Q Consensus 281 ~--~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~-AGl~~~ 352 (461)
. +|++ ++|||+++||++++.|+++|.+++++|.|++.... .|...+.++..+++++|++ +|++++
T Consensus 230 ~~~~G~~-------~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~ 302 (421)
T PTZ00050 230 KDRAGFV-------MGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININ 302 (421)
T ss_pred CCCCCEe-------eccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChh
Confidence 5 6776 89999999999999999999999999999988754 3445566778999999999 999999
Q ss_pred CccEEEecCCChH----HHH-HHHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC-----------
Q 012522 353 DINLFEINEAFAS----QYV-YCIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK----------- 414 (461)
Q Consensus 353 DID~~eiheafa~----~~~-~~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~----------- 414 (461)
|||++|+|.+++. .+. ...+.+|-.. .++.++..+..+||+.||+|+..++.++..|+.+ +|
T Consensus 303 dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~ 382 (421)
T PTZ00050 303 DVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAE 382 (421)
T ss_pred hCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCC
Confidence 9999999999882 222 2233344322 4567777788999999999999999999999986 10
Q ss_pred ---------------CCCEEEEEecccCcceeEEEEEE
Q 012522 415 ---------------DCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 415 ---------------~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
..+..++++++-||.+.++||++
T Consensus 383 ~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~ 420 (421)
T PTZ00050 383 CDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTK 420 (421)
T ss_pred CCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence 13678888888888899999876
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-26 Score=234.63 Aligned_cols=270 Identities=21% Similarity=0.315 Sum_probs=198.9
Q ss_pred HHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC-----------c--------------cchHHHHHHHHcCCCC
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-----------T--------------RAMECRMAAFYAGFPE 126 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~-----------~--------------~~~~a~~ia~~lGl~~ 126 (461)
.++..++++||+++|+++.+.+ +|++|+..+... . ....+.+++..+|+
T Consensus 76 ~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl-- 153 (414)
T PRK08722 76 QYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL-- 153 (414)
T ss_pred HHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC--
Confidence 5788899999999999765544 578887643221 0 01367788889999
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHh
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRF 206 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 206 (461)
++|.++++++|+|+++||..|+++|++|++|++||+|+|..... . .
T Consensus 154 ~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~-~-----------------------~---------- 199 (414)
T PRK08722 154 RGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTP-L-----------------------G---------- 199 (414)
T ss_pred CCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCH-H-----------------------H----------
Confidence 78999999999999999999999999999999999999986540 0 0
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCc
Q 012522 207 GVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGT 284 (461)
Q Consensus 207 g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~ 284 (461)
...+.. .+.+ .....+ +++ .+|| ||. +|+
T Consensus 200 -----------~~~f~~------~~~l-------s~~~~~------------p~~------------~~rp-fd~~~~G~ 230 (414)
T PRK08722 200 -----------MAGFGA------AKAL-------STRNDE------------PQK------------ASRP-WDKDRDGF 230 (414)
T ss_pred -----------HHHHHH------cCCc-------ccCCCC------------Ccc------------ccCc-CcCCCCce
Confidence 000000 0000 000000 111 3566 775 788
Q ss_pred cccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccEEEe
Q 012522 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI 359 (461)
Q Consensus 285 lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ei 359 (461)
+ ++|||+++||++++.|+++|.+++++|.+++.... .|+..+.+...+++++|+++|++++||||+|.
T Consensus 231 ~-------~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~ 303 (414)
T PRK08722 231 V-------LGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNA 303 (414)
T ss_pred E-------eeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEc
Confidence 8 89999999999999999999999999999988653 33434445678999999999999999999999
Q ss_pred cCCChH----HHHHHHH-HcCCC-CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-------------------CC
Q 012522 360 NEAFAS----QYVYCIK-KLGLD-PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-------------------GK 414 (461)
Q Consensus 360 heafa~----~~~~~~e-~LGl~-~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-------------------~~ 414 (461)
|.+++. .+...++ .+|-. ..++.++.-+..+||+.+|+|+.+++.++..|+.+ ++
T Consensus 304 hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~v~ 383 (414)
T PRK08722 304 HGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVP 383 (414)
T ss_pred cCccCCCCCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCC
Confidence 998874 3333333 33422 23345555567799999999999999999999976 11
Q ss_pred -------CCCEEEEEecccCcceeEEEEEE
Q 012522 415 -------DCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 415 -------~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.++.+.++.+.||.+.++||++
T Consensus 384 ~~~~~~~~~~~~l~nsfGfGG~n~~lvl~~ 413 (414)
T PRK08722 384 HTARKVESMEYAICNSFGFGGTNGSLIFKK 413 (414)
T ss_pred CccccCCCCCEEEEecccCCCceEEEEEec
Confidence 24678888877788889998875
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-26 Score=228.06 Aligned_cols=277 Identities=19% Similarity=0.135 Sum_probs=205.1
Q ss_pred cEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCC----cCCcCeEEEEeecCCCC----------------
Q 012522 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLN----PSEVGDIVVGTVLAPGS---------------- 109 (461)
Q Consensus 50 ~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~----~~~Id~vi~g~~~~~~~---------------- 109 (461)
+++|+|.+.+ ..+|+.+|+++||+++|++ +++||.|++++..+...
T Consensus 1 ~~~i~g~g~~--------------~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (332)
T cd00825 1 RAVITGLGSY--------------VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYV 66 (332)
T ss_pred CceEEcccHH--------------HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcch
Confidence 4688998887 5789999999999999999 99999999998865531
Q ss_pred ----ccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhh
Q 012522 110 ----TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIF 185 (461)
Q Consensus 110 ----~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~ 185 (461)
..+..+..++..+|+ ++|+++++.+|+|++.+|..|.++|++|++|++||+|+|.++.....
T Consensus 67 ~~~~~~~~~a~~ia~~lgl--~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~------------ 132 (332)
T cd00825 67 VTKAMFPGASGQIATPLGI--HGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDC------------ 132 (332)
T ss_pred hhcccchHHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHH------------
Confidence 023457889999999 68999999999999999999999999999999999999987651000
Q ss_pred hcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCC
Q 012522 186 TQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRP 265 (461)
Q Consensus 186 ~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~ 265 (461)
.+. . +.. ..++++
T Consensus 133 --------~~~-------------------------~----------~~~--------------------~~~~~~---- 145 (332)
T cd00825 133 --------EFD-------------------------A----------MGA--------------------LSTPEK---- 145 (332)
T ss_pred --------HHH-------------------------h----------hcc--------------------ccCCCC----
Confidence 000 0 000 000111
Q ss_pred CCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC-----CCCCcHHHHH
Q 012522 266 NTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS-----VMGIGPAVAI 340 (461)
Q Consensus 266 ~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-----~~~~~~~~ai 340 (461)
..+| |+. ..++..++|||+|+||++++.+++++.++++.+.++........ ........++
T Consensus 146 --------~~~~-~~~-----~~~g~~~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i 211 (332)
T cd00825 146 --------ASRT-FDA-----AADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAA 211 (332)
T ss_pred --------CCCC-CCC-----CCCCEEEEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHH
Confidence 1123 332 12333489999999999999999999999889988876443211 1123456899
Q ss_pred HHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCC---CcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC--
Q 012522 341 PAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPE---KVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK-- 414 (461)
Q Consensus 341 ~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~---~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~-- 414 (461)
+++|+++|++++|||++++|+.+........+.+++... +++.......+||+.++++...+.+++++++.+ +|
T Consensus 212 ~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~ 291 (332)
T cd00825 212 KEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPS 291 (332)
T ss_pred HHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCC
Confidence 999999999999999999999987544333334433322 245555567899999999999999999999876 22
Q ss_pred --------------------CCCEEEEEecccCcceeEEEE
Q 012522 415 --------------------DCRFGVISMCIGSGMGAAAVF 435 (461)
Q Consensus 415 --------------------~~~~gl~~~~~g~G~g~A~v~ 435 (461)
+.+++++..++.||...++||
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 292 IHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred CCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 457888888777777777664
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=221.30 Aligned_cols=262 Identities=24% Similarity=0.276 Sum_probs=187.0
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
++-.|. .||.+.. +.-..++++..+|+.+|+++||+++|++|+|||.||+.+.+|+.. .|..+..++..||+. ++
T Consensus 30 sdewI~--~rtGir~-R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~-~Ps~A~~vq~~LG~~-~~ 104 (323)
T COG0332 30 SDEWIE--TRTGIRE-RRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHL-FPSTACLVQARLGLG-GA 104 (323)
T ss_pred Ccceee--eecCCce-eeecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccC-CChHHHHHHHHhCCC-Cc
Confidence 344444 3566554 223335889999999999999999999999999999999999987 788999999999995 58
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCC
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGV 208 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~ 208 (461)
++|+++.+|+++++||..|..+|++|.++.+||+|.|.+|+.-
T Consensus 105 ~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~l------------------------------------- 147 (323)
T COG0332 105 PAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRIL------------------------------------- 147 (323)
T ss_pred ceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhccC-------------------------------------
Confidence 9999999999999999999999999999999999999998711
Q ss_pred CHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccC
Q 012522 209 TRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAG 288 (461)
Q Consensus 209 sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~ 288 (461)
+.+ .+.
T Consensus 148 -------------------------------------------------d~~-------------------------dR~ 153 (323)
T COG0332 148 -------------------------------------------------DWT-------------------------DRD 153 (323)
T ss_pred -------------------------------------------------CHh-------------------------hcc
Confidence 000 001
Q ss_pred CCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeec------------cCC---C----CC-CC--------cHHHHH
Q 012522 289 NASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG------------VDP---S----VM-GI--------GPAVAI 340 (461)
Q Consensus 289 ~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~------------~~p---~----~~-~~--------~~~~ai 340 (461)
+|..+||||+|+||...+ .+.+. +..-++..... .++ . .| +. .+..++
T Consensus 154 t~vlFgDGAgAvvl~~~~--~~~~i--~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~ 229 (323)
T COG0332 154 TCVLFGDGAGAVVLEATE--DDNGI--LDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAI 229 (323)
T ss_pred ceEEEcCCceEEEEecCC--CCcCe--eeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHH
Confidence 222389999999999876 12221 11111111100 000 0 00 10 124789
Q ss_pred HHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHH--ccCCCCCE
Q 012522 341 PAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMK--RRGKDCRF 418 (461)
Q Consensus 341 ~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~--~~~~~~~~ 418 (461)
+++|+++|++++|||+|.+||++..+.....+.||++++|+..+- --+||...|| +..++.++- ++.+++.+
T Consensus 230 ~~~L~~~~l~~~dId~~vpHQan~ri~~~i~~~l~~~~~k~~~~~--~~yGNtsaAs----iplaL~~~~~~g~ik~Gd~ 303 (323)
T COG0332 230 EEVLEKAGLTPEDIDWFVPHQANLRIIEAIAKKLGIPEEKVVVTV--DKYGNTSAAS----IPLALDEALREGRIKPGDL 303 (323)
T ss_pred HHHHHHcCCCHHHCCEEccccccHHHHHHHHHHcCCCHHHHhhHH--HHhcccccch----HHHHHHHHhhhCCCCCCCE
Confidence 999999999999999999999999999999999999998875542 2245555554 445555442 22335555
Q ss_pred EEEEecccCcceeEEEEEE
Q 012522 419 GVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 419 gl~~~~~g~G~g~A~v~~~ 437 (461)
.++.. .|+|+.+..++.+
T Consensus 304 ill~~-fG~Gltwg~~~~r 321 (323)
T COG0332 304 VLLEA-FGGGLTWGAALVR 321 (323)
T ss_pred EEEEe-ecCcceeeeEEEE
Confidence 55544 3667666555544
|
|
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=222.30 Aligned_cols=262 Identities=23% Similarity=0.310 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHHHcCCCcCC-cCeEEEEeecCCCC----------c------------------cchHHHHHHHHcCCCC
Q 012522 76 DLLAPVLKAVIEKTRLNPSE-VGDIVVGTVLAPGS----------T------------------RAMECRMAAFYAGFPE 126 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~-Id~vi~g~~~~~~~----------~------------------~~~~a~~ia~~lGl~~ 126 (461)
.++..++++||+++|+++.. -=++++|+..+... + ...++..++..+|+
T Consensus 58 ~~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~-- 135 (381)
T PRK05952 58 DLTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGT-- 135 (381)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCC--
Confidence 36678999999999997522 12577887543210 0 01246678889999
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHh
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRF 206 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 206 (461)
++|++++.++|+|++.||..|++.|++|++|++||+|+|.... |
T Consensus 136 ~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~-~----------------------------------- 179 (381)
T PRK05952 136 QGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPIT-P----------------------------------- 179 (381)
T ss_pred CCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-H-----------------------------------
Confidence 7899999999999999999999999999999999999997322 0
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCc
Q 012522 207 GVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGT 284 (461)
Q Consensus 207 g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~ 284 (461)
+....+.. .+ .++.+ .++| ||. +|+
T Consensus 180 ---------~~~~~~~~------~~------------------------~ls~~-------------~~rP-fd~~r~G~ 206 (381)
T PRK05952 180 ---------LTLAGFQQ------MG------------------------ALAKT-------------GAYP-FDRQREGL 206 (381)
T ss_pred ---------HHHHHHHh------cC------------------------CcCCC-------------CCCC-CCCCCCCc
Confidence 00000000 00 01111 3466 775 788
Q ss_pred cccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccEEEe
Q 012522 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI 359 (461)
Q Consensus 285 lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ei 359 (461)
+ ++|||+++||++++.|++++.+++++|.+++.... .|...+.+...+++++|+++|++++|||+++.
T Consensus 207 v-------~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~ 279 (381)
T PRK05952 207 V-------LGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHA 279 (381)
T ss_pred c-------ccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEc
Confidence 8 89999999999999999999999999999987643 23334456789999999999999999999998
Q ss_pred cCCChH----HHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC--------------------
Q 012522 360 NEAFAS----QYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK-------------------- 414 (461)
Q Consensus 360 heafa~----~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~-------------------- 414 (461)
|...+. .+...++.+ + ..++++++.+..+||+.+|+|+.+++.++..|+.+ +|
T Consensus 280 hgtgt~~~D~~E~~al~~~-f-g~~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~~ 357 (381)
T PRK05952 280 HGTATRLNDQREANLIQAL-F-PHRVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQQ 357 (381)
T ss_pred cCCCCCCCcHHHHHHHHHH-c-CCCCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCccc
Confidence 876553 333333333 1 24577888889999999999999999999999987 21
Q ss_pred -CCCEEEEEecccCcceeEEEEEE
Q 012522 415 -DCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 415 -~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
..++.+.+.++-||.+.++||.+
T Consensus 358 ~~~~~~l~~s~gfGG~na~lvl~~ 381 (381)
T PRK05952 358 SPLQNVLCLSFGFGGQNAAIALGK 381 (381)
T ss_pred CCCCEEEEeeecCCCeeEEEEEeC
Confidence 23678888887888889998864
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-24 Score=217.97 Aligned_cols=272 Identities=17% Similarity=0.259 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHHHHHcCCC--cCCcCeEEEEeecCCCC-----------cc--------------chHHHHHHHHcCCCC
Q 012522 74 ADDLLAPVLKAVIEKTRLN--PSEVGDIVVGTVLAPGS-----------TR--------------AMECRMAAFYAGFPE 126 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~--~~~Id~vi~g~~~~~~~-----------~~--------------~~~a~~ia~~lGl~~ 126 (461)
..+++..|+++|++++|+. ++++ +|++|+..+... ++ ...+.+++..+|+
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l-- 80 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERT-ATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHF-- 80 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccE-EEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCC--
Confidence 3578889999999999974 3343 577777544421 00 1256778889999
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHh
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRF 206 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 206 (461)
++|.++++++|+|++.||..|+++|++|++|++||+|+|..... . ...++
T Consensus 81 ~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~-~--------------------~~~~f--------- 130 (342)
T PRK14691 81 KGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDT-V--------------------SLAGF--------- 130 (342)
T ss_pred CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCH-H--------------------HHHHH---------
Confidence 79999999999999999999999999999999999999985440 0 00000
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCc
Q 012522 207 GVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGT 284 (461)
Q Consensus 207 g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~ 284 (461)
... ...... + . .++++ .+|| ||. +|+
T Consensus 131 ---------------~~~-~~ls~~-~----------~------------~~p~~------------~~rP-Fd~~r~G~ 158 (342)
T PRK14691 131 ---------------AAA-RALSTH-F----------N------------STPEK------------ASRP-FDTARDGF 158 (342)
T ss_pred ---------------HHh-hhhhcC-C----------C------------CCCCc------------CCCC-CCCCCCCc
Confidence 000 000000 0 0 00111 3566 876 788
Q ss_pred cccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccC-----CCCCCCcHHHHHHHHHHHcCCCCCCccEEEe
Q 012522 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINLFEI 359 (461)
Q Consensus 285 lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~ai~~aL~~AGl~~~DID~~ei 359 (461)
+ ++|||+++||++++.|+++|.+++++|.+++..... |...+.++..+++++|+++||+++|||++|.
T Consensus 159 v-------~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIea 231 (342)
T PRK14691 159 V-------MGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNA 231 (342)
T ss_pred c-------ccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 8 999999999999999999999999999999987654 4445667889999999999999999999999
Q ss_pred cCCChH----HHHHHHH-HcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC-------------------
Q 012522 360 NEAFAS----QYVYCIK-KLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK------------------- 414 (461)
Q Consensus 360 heafa~----~~~~~~e-~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~------------------- 414 (461)
|++++. .+...++ .+|-. .++.++.-+..+||+.|++|+.+++..+..|+.+ +|
T Consensus 232 HgtgT~~~D~~E~~Ai~~~fg~~-~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~ 310 (342)
T PRK14691 232 HATSTPVGDLGEINAIKHLFGES-NALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIA 310 (342)
T ss_pred cCCCCcCCCHHHHHHHHHHhCCC-CCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccCccc
Confidence 999886 3333333 33422 2345555567899999999999999999999876 10
Q ss_pred ------CCCEEEEEecccCcceeEEEEEEc
Q 012522 415 ------DCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 415 ------~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+.++.+.++++-||.+.++||++.
T Consensus 311 ~~~~~~~~~~al~nsfgfGG~n~~lvl~~~ 340 (342)
T PRK14691 311 GNAQPHDMTYALSNGFGFAGVNASILLKRW 340 (342)
T ss_pred CCCccCCCCEEEEeCccCCCeeEEEEEeec
Confidence 236788888878888999999874
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.9e-24 Score=222.02 Aligned_cols=272 Identities=21% Similarity=0.284 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcC-----CcCeEEEEeecCCCCc-------------------------cchHHHHHHHHcC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPS-----EVGDIVVGTVLAPGST-------------------------RAMECRMAAFYAG 123 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~-----~Id~vi~g~~~~~~~~-------------------------~~~~a~~ia~~lG 123 (461)
..+|+..|+++||+++|+++. +..+|++|+..+...+ ...++..++..+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 457899999999999998642 4567888875433210 0124567888999
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
+ .+|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. +. ...++.
T Consensus 173 l--~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~-~~--------------------~~~~~~----- 224 (437)
T PLN02836 173 F--QGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSID-AL--------------------SIAGFS----- 224 (437)
T ss_pred C--CCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HH--------------------HHHHHH-----
Confidence 8 6999999999999999999999999999999999999997543 00 000000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-- 281 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-- 281 (461)
..++..+. +. .+++ ..++| ||.
T Consensus 225 -----------------~~~~l~~~----~~----------------------~~p~------------~~~~p-fd~~~ 248 (437)
T PLN02836 225 -----------------RSRALSTK----FN----------------------SCPT------------EASRP-FDCDR 248 (437)
T ss_pred -----------------Hhhhhhcc----cC----------------------CCcc------------cccCC-cccCC
Confidence 00000000 00 0001 13455 654
Q ss_pred CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccE
Q 012522 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINL 356 (461)
Q Consensus 282 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~ 356 (461)
+|++ ++|||+++||++++.|+++|.+++++|.|++.... .|...+.+...+++++|+++|++++|||+
T Consensus 249 ~G~~-------~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ 321 (437)
T PLN02836 249 DGFV-------IGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDY 321 (437)
T ss_pred CCee-------eecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHcCE
Confidence 5666 89999999999999999999999999999987653 23333344568999999999999999999
Q ss_pred EEecCCChH----HHHHHH-HHcCCC----CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc---------------
Q 012522 357 FEINEAFAS----QYVYCI-KKLGLD----PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR--------------- 412 (461)
Q Consensus 357 ~eiheafa~----~~~~~~-e~LGl~----~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~--------------- 412 (461)
+|.|+.++. .+...+ +.++-. ..+++...+ .+||+.||+|+.+++.++.+|+.+
T Consensus 322 ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~--~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p~~ 399 (437)
T PLN02836 322 VNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKG--ATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIF 399 (437)
T ss_pred EEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeECCcc--cccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCC
Confidence 999999884 222222 222211 235555554 569999999999999999999987
Q ss_pred ----CC-------CCCEEEEEecccCcceeEEEEEEc
Q 012522 413 ----GK-------DCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 413 ----~~-------~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
++ ..++++.++.+-||.+.++||++.
T Consensus 400 ~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~~ 436 (437)
T PLN02836 400 DDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTSP 436 (437)
T ss_pred CcccCcccCCCCCCccEEEEecccCCCeeEEEEEecC
Confidence 11 236678888777888999998864
|
|
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-24 Score=221.26 Aligned_cols=271 Identities=25% Similarity=0.349 Sum_probs=197.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCe----EEEEeecCCCC-------------------------ccchHHHHHHHHcC
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGS-------------------------TRAMECRMAAFYAG 123 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~----vi~g~~~~~~~-------------------------~~~~~a~~ia~~lG 123 (461)
...+|+.+++++||+++|++++++|. +++|+..+... .....+..++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 34689999999999999999988775 66665443210 01335778999999
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
+ +++.++++.+|+|+++||..|+++|++|++|++||+|+|.++. | +.+.
T Consensus 150 l--~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~-p-----------------------~~~~----- 198 (406)
T cd00834 150 L--RGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALIT-P-----------------------LTLA----- 198 (406)
T ss_pred C--CCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccC-H-----------------------HHHH-----
Confidence 9 5799999999999999999999999999999999999998774 1 0000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-- 281 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-- 281 (461)
.+.+ .+.+.. .. .+++. .++| |+.
T Consensus 199 ----------------~~~~------~~~l~~-------~~------------~~p~~------------~~~p-f~~~~ 224 (406)
T cd00834 199 ----------------GFAA------LRALST-------RN------------DDPEK------------ASRP-FDKDR 224 (406)
T ss_pred ----------------HHHh------cCCcCC-------CC------------CCCcc------------CCCC-CCCCC
Confidence 0000 000000 00 00000 2334 543
Q ss_pred CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccE
Q 012522 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINL 356 (461)
Q Consensus 282 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~ 356 (461)
+|++ ++|||+++||++.+.|++++.+++++|.+++.... .|...+.+...+++++|+++|++++|||+
T Consensus 225 ~g~~-------~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~ 297 (406)
T cd00834 225 DGFV-------LGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDY 297 (406)
T ss_pred CCEe-------eeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCE
Confidence 5666 89999999999999999999999999999887542 23333556778999999999999999999
Q ss_pred EEecCCChH----HHHHHHH-HcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC----------------
Q 012522 357 FEINEAFAS----QYVYCIK-KLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK---------------- 414 (461)
Q Consensus 357 ~eiheafa~----~~~~~~e-~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~---------------- 414 (461)
++.|...+. .+...++ .++-...+++++..+..+||+.+|+|+.+++.++++|+.+ +|
T Consensus 298 v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~ 377 (406)
T cd00834 298 INAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLDY 377 (406)
T ss_pred EecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccc
Confidence 999987663 2333332 2333234666677777889999999999999999999977 11
Q ss_pred --------CCCEEEEEecccCcceeEEEE
Q 012522 415 --------DCRFGVISMCIGSGMGAAAVF 435 (461)
Q Consensus 415 --------~~~~gl~~~~~g~G~g~A~v~ 435 (461)
..++++++..+.||.+.++||
T Consensus 378 ~~~~~~~~~~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 378 VPNEAREAPIRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred cCCCCccccccEEEEeeecCCceeeEEEC
Confidence 236788888777888887775
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.3e-24 Score=224.84 Aligned_cols=270 Identities=20% Similarity=0.316 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHHHcCCCcC---CcC----eEEEEeecCCCC------------------------ccchHHHHHHHHcCC
Q 012522 76 DLLAPVLKAVIEKTRLNPS---EVG----DIVVGTVLAPGS------------------------TRAMECRMAAFYAGF 124 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~---~Id----~vi~g~~~~~~~------------------------~~~~~a~~ia~~lGl 124 (461)
.++..++++||+++|++++ +++ +|++|+..+... .....+.+++..+|+
T Consensus 201 ~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl 280 (540)
T PLN02787 201 LYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGW 280 (540)
T ss_pred HHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCC
Confidence 5778899999999999764 222 688887653310 001235578888999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
.+|.++++++|+|++.||..|+++|++|++|++|++|+|.... |+ .+
T Consensus 281 --~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~-p~-----------------------~~------- 327 (540)
T PLN02787 281 --MGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAII-PI-----------------------GL------- 327 (540)
T ss_pred --CCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccC-HH-----------------------HH-------
Confidence 6899999999999999999999999999999999999997533 10 00
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--C
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D 282 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~ 282 (461)
..+... .+. ...+.+| + ..+|| ||. +
T Consensus 328 --------------~~f~~~-~aL------------S~~~~~p------------~------------~~~rP-FD~~rd 355 (540)
T PLN02787 328 --------------GGFVAC-RAL------------SQRNDDP------------T------------KASRP-WDMNRD 355 (540)
T ss_pred --------------HHHHHH-HHh------------hccCCCc------------c------------cccCC-cccCCC
Confidence 000000 000 0000001 1 14567 876 7
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
|++ +||||+++||++.+.|+++|.+++++|.|++.... .|+..+.+...+++++|+++|++++||||+
T Consensus 356 Gfv-------~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyI 428 (540)
T PLN02787 356 GFV-------MGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYI 428 (540)
T ss_pred Ccc-------cccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEE
Confidence 998 99999999999999999999999999999987653 344445567789999999999999999999
Q ss_pred EecCCChH----HHHHHHH-HcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC-----------------
Q 012522 358 EINEAFAS----QYVYCIK-KLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK----------------- 414 (461)
Q Consensus 358 eiheafa~----~~~~~~e-~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~----------------- 414 (461)
+.|-..+. .+...++ .+|-. .++.++.-+..+||+.||+|+.+++.++..|+.+ +|
T Consensus 429 naHGTGT~~gD~~E~~Ai~~~Fg~~-~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~~ 507 (540)
T PLN02787 429 NAHATSTKAGDLKEYQALMRCFGQN-PELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVL 507 (540)
T ss_pred EccCccCCCCCHHHHHHHHHHhCCC-CCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccc
Confidence 99976553 3443333 33422 2233444456799999999999999999999976 10
Q ss_pred --------CCCEEEEEecccCcceeEEEEEEc
Q 012522 415 --------DCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 415 --------~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+.+++|.+..+.||.+.++||++.
T Consensus 508 v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~~ 539 (540)
T PLN02787 508 VGPKKERLDIKVALSNSFGFGGHNSSILFAPY 539 (540)
T ss_pred cccccccCCcCEEEEeeecCCceeEEEEEEeC
Confidence 236778888888889999998863
|
|
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-24 Score=222.76 Aligned_cols=266 Identities=23% Similarity=0.313 Sum_probs=194.2
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCCc------------------cchHHHHHHHHcCCCCCCCeEE
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGST------------------RAMECRMAAFYAGFPETVPLRT 132 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~~------------------~~~~a~~ia~~lGl~~~~~~~~ 132 (461)
..|+.+|+++||+++|+++++|| .|++|+..+++.. ....+..++..+|+ +.|+++
T Consensus 88 ~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl--~g~~~~ 165 (424)
T smart00825 88 QRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDL--RGPSVT 165 (424)
T ss_pred HHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCC--CCCccc
Confidence 46899999999999999999999 7898876543210 12355678889999 579999
Q ss_pred eCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHH
Q 012522 133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE 212 (461)
Q Consensus 133 v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~ 212 (461)
++.+|+|++.||..|+++|++|++|++||+|+|.+..... ..+
T Consensus 166 v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~---------------------~~~---------------- 208 (424)
T smart00825 166 VDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDT---------------------FVG---------------- 208 (424)
T ss_pred cccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHH---------------------HHH----------------
Confidence 9999999999999999999999999999999998654100 000
Q ss_pred HHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCccccCCC
Q 012522 213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNA 290 (461)
Q Consensus 213 ~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~lt~~~~ 290 (461)
+.. .++ +++++ .++| |+. +|++
T Consensus 209 --------~~~------~~~------------------------l~~~~------------~~~p-f~~~~~g~~----- 232 (424)
T smart00825 209 --------FSR------AGM------------------------LSPDG------------RCKT-FDADADGYV----- 232 (424)
T ss_pred --------Hhh------cCC------------------------CCCCC------------CCCC-CCCCCCccc-----
Confidence 000 000 11111 1234 543 5666
Q ss_pred CcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC-----CCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChH
Q 012522 291 SQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS-----VMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFAS 365 (461)
Q Consensus 291 ~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-----~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~ 365 (461)
++|||+++||++++.|++++.+++++|.+++....... ..+.+...+++++|+++|++++|||+++.|..++.
T Consensus 233 --~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~ 310 (424)
T smart00825 233 --RGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTGTP 310 (424)
T ss_pred --ccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCC
Confidence 89999999999999999999999999999987653221 11234568999999999999999999999977653
Q ss_pred ----HHHHHH-HHcCCCC---CCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC----------------------
Q 012522 366 ----QYVYCI-KKLGLDP---EKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK---------------------- 414 (461)
Q Consensus 366 ----~~~~~~-e~LGl~~---~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~---------------------- 414 (461)
.+...+ +.++... .++.+++-+..+||+.+|+|+.+++.++.+|+.+ +|
T Consensus 311 ~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~ 390 (424)
T smart00825 311 LGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEESPLRVP 390 (424)
T ss_pred CCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccCceEcc
Confidence 222222 3334321 2344444455679999999999999999999986 10
Q ss_pred ----------CCCEEEEEecccCcceeEEEEEE
Q 012522 415 ----------DCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 415 ----------~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.+..+++.++-||.+.+++|++
T Consensus 391 ~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~ 423 (424)
T smart00825 391 TEATPWPATGRPRRAGVSSFGFGGTNAHVILEE 423 (424)
T ss_pred CCCcCCCCCCCccEEEEeccCCCCceEEEEEec
Confidence 13567777777788888888864
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-24 Score=216.51 Aligned_cols=273 Identities=25% Similarity=0.338 Sum_probs=204.8
Q ss_pred CHHHHHHHHHHHHHHHcCCC-cCCcC---eEEEEeecCCCCc-----------c---------------chHHHHHHHHc
Q 012522 73 LADDLLAPVLKAVIEKTRLN-PSEVG---DIVVGTVLAPGST-----------R---------------AMECRMAAFYA 122 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~-~~~Id---~vi~g~~~~~~~~-----------~---------------~~~a~~ia~~l 122 (461)
....|+..|+.+||+++|++ ..+++ .+++|+..+.... + ...+..++..+
T Consensus 70 ~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~ 149 (412)
T COG0304 70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF 149 (412)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHh
Confidence 45789999999999999997 33443 3556655443220 0 02567888899
Q ss_pred CCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecc-ccccccccccCCChhhhhhhcccccCccHHHHHHH
Q 012522 123 GFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLES-MTVNSISVVGQVNPKVEIFTQARDCLLPMGITSEN 201 (461)
Q Consensus 123 Gl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 201 (461)
|+ .++.+++.++|+|+.+||..|+++|++|++|++|++|+|. .+...+
T Consensus 150 g~--~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i----------------------------- 198 (412)
T COG0304 150 GL--KGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGI----------------------------- 198 (412)
T ss_pred CC--CCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHH-----------------------------
Confidence 99 7899999999999999999999999999999999999987 333110
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC
Q 012522 202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281 (461)
Q Consensus 202 ~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~ 281 (461)
+-|. +.++. ...+.+| ++ .+|| ||.
T Consensus 199 ------------~gF~------am~Al------------st~nd~p----------------~~--------asrP-fd~ 223 (412)
T COG0304 199 ------------AGFE------AMRAL------------STRNDDP----------------EK--------ASRP-FDK 223 (412)
T ss_pred ------------HHHH------HHHHh------------ccCCCCc----------------cc--------cCCC-CCC
Confidence 0000 11110 0001112 11 5677 776
Q ss_pred --CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeec-----cCCCCCCCcHHHHHHHHHHHcCCCCCCc
Q 012522 282 --DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAGLQIDDI 354 (461)
Q Consensus 282 --~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~-----~~p~~~~~~~~~ai~~aL~~AGl~~~DI 354 (461)
||++ +++||+++||++.+.|+++|.+++++++|++... +.|...+.+...+++.+|+.+|++++||
T Consensus 224 ~RdGfv-------~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~i 296 (412)
T COG0304 224 NRDGFV-------IGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDI 296 (412)
T ss_pred CCCCEE-------EecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHC
Confidence 8999 9999999999999999999999999999999875 3566678889999999999999999999
Q ss_pred cEEEecCCCh----HHHHHHHHHc-CCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-----------------
Q 012522 355 NLFEINEAFA----SQYVYCIKKL-GLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR----------------- 412 (461)
Q Consensus 355 D~~eiheafa----~~~~~~~e~L-Gl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~----------------- 412 (461)
||+..|...+ ..+...++.+ |=-..++.+++-+..+||++||.|+.+.+-.+..|+..
T Consensus 297 dYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~~~~ 376 (412)
T COG0304 297 DYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEAAD 376 (412)
T ss_pred CEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCccccc
Confidence 9999997655 3455555543 32233455666677899999999999999999999955
Q ss_pred ---CCC------CCEEEEEecccCcceeEEEEEEc
Q 012522 413 ---GKD------CRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 413 ---~~~------~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+++ .++++.+..+-||.+.+++|.+.
T Consensus 377 l~~v~~~~~~~~~~~~lsnsfGFGG~Na~lv~~~~ 411 (412)
T COG0304 377 LDVVPNEARTGAVRAALSNSFGFGGTNASLVFKRY 411 (412)
T ss_pred ccccCCcccccceeEEEecccccCCcceEEEEecC
Confidence 111 45677777766778888888875
|
|
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.9e-24 Score=219.83 Aligned_cols=272 Identities=22% Similarity=0.192 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC--eEEEEeecCC----------------CC--------ccchHHHHHHHHcCCCCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG--DIVVGTVLAP----------------GS--------TRAMECRMAAFYAGFPET 127 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id--~vi~g~~~~~----------------~~--------~~~~~a~~ia~~lGl~~~ 127 (461)
..+|+..|+++||+++|+++.+.+ +|++|+.... .. .....+..++..+|+ +
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl--~ 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGI--R 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCC--C
Confidence 567999999999999998643322 3556543211 00 001255678889999 6
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhC
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFG 207 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 207 (461)
+|.++++++|+|++.||..|+++|++|++|++||+|+|.... +. ...++
T Consensus 158 G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~-~~--------------------~~~~~---------- 206 (410)
T PRK07103 158 GEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLS-YW--------------------ECQAL---------- 206 (410)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HH--------------------HHHHH----------
Confidence 899999999999999999999999999999999999874322 00 00000
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCcc
Q 012522 208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTT 285 (461)
Q Consensus 208 ~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~l 285 (461)
.. .+. ++.+ |...+.+ ..++| ||. +|++
T Consensus 207 --------------~~------~~~------------------------l~~~---~~~~~p~--~~~rP-fd~~~dG~v 236 (410)
T PRK07103 207 --------------RS------LGA------------------------MGSD---RFADEPE--AACRP-FDQDRDGFI 236 (410)
T ss_pred --------------HH------ccc------------------------cccC---ccCCCcc--cCcCC-CCCCCCCee
Confidence 00 000 0000 0000000 13456 765 6777
Q ss_pred ccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCC---CCCCCcHHHHHHHHHHHcCCCCCCccEEEecCC
Q 012522 286 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP---SVMGIGPAVAIPAAVKSAGLQIDDINLFEINEA 362 (461)
Q Consensus 286 t~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p---~~~~~~~~~ai~~aL~~AGl~~~DID~~eihea 362 (461)
+||||+++||++.+.|+++|.+++++|.|++...... .....+...+++++|+++|++++|||+++.|..
T Consensus 237 -------~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hgt 309 (410)
T PRK07103 237 -------YGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGT 309 (410)
T ss_pred -------EeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCC
Confidence 9999999999999999999999999999998865321 122234568999999999999999999999999
Q ss_pred ChH----HHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C-----------------------C
Q 012522 363 FAS----QYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G-----------------------K 414 (461)
Q Consensus 363 fa~----~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~-----------------------~ 414 (461)
++. .+...+...+....+|+..++. +||+.+|+|+.+++.++++|+.+ + .
T Consensus 310 gt~~~D~~E~~al~~~~~~~~~v~s~k~~--~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~v~~~~~~~ 387 (410)
T PRK07103 310 GSPLGDETELAALFASGLAHAWINATKSL--TGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFRWVGSTAESA 387 (410)
T ss_pred CCCCCCHHHHHHHhcCCCCCCeEECCCcc--cccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcCccCCCCcCC
Confidence 886 3333332233334566666655 59999999999999999999976 1 0
Q ss_pred CCCEEEEEecccCcceeEEEEEE
Q 012522 415 DCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 415 ~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.++.+++..+.||.+.++||++
T Consensus 388 ~~~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 388 RIRYALSLSFGFGGINTALVLER 410 (410)
T ss_pred CCCEEEEecccCCCceEEEEEeC
Confidence 24788888888888899999874
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-23 Score=216.25 Aligned_cols=268 Identities=22% Similarity=0.247 Sum_probs=195.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcC--eEEEEeecCCCC-----------cc--------------chHHHHHHHHcCCCCC
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVG--DIVVGTVLAPGS-----------TR--------------AMECRMAAFYAGFPET 127 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id--~vi~g~~~~~~~-----------~~--------------~~~a~~ia~~lGl~~~ 127 (461)
..++..++++||+++|++..+-+ .+++|+..+... .+ ...+.+++..+|+ .
T Consensus 84 ~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~--~ 161 (418)
T PRK07910 84 QRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA--K 161 (418)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC--C
Confidence 45788899999999997432211 467776543321 00 1145667888888 6
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccc-ccccccCCChhhhhhhcccccCccHHHHHHHHHHHh
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN-SISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRF 206 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 206 (461)
+|.++++++|+|++.||..|++.|++|++|++|++|+|..... ++ .+
T Consensus 162 G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~----------------------~~---------- 209 (418)
T PRK07910 162 AGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPI----------------------AG---------- 209 (418)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHH----------------------HH----------
Confidence 8999999999999999999999999999999999999986540 00 00
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCC-CccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CC
Q 012522 207 GVTRQEQDLAAVESHRRAAAATASGK-FKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DG 283 (461)
Q Consensus 207 g~sre~~~~~a~~~~~~A~~a~~ag~-~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g 283 (461)
+.+ .+. + +... .++++ .+|| ||. +|
T Consensus 210 --------------f~~------~~~~l-------s~~~------------~~~~~------------~~rP-Fd~~~~G 237 (418)
T PRK07910 210 --------------FAQ------MRIVM-------STNN------------DDPAG------------ACRP-FDKDRDG 237 (418)
T ss_pred --------------HHh------cCCcc-------ccCC------------CCCCC------------CcCC-CcCCCCC
Confidence 000 000 0 0000 00111 3566 876 78
Q ss_pred ccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 284 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
++ ++||++++||++.+.|+++|.+++++|.+++.... .|...+.+...+++++|+++|++++|||++|
T Consensus 238 ~v-------~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie 310 (418)
T PRK07910 238 FV-------FGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVN 310 (418)
T ss_pred Ee-------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEE
Confidence 88 89999999999999999999999999999988652 3444455667999999999999999999999
Q ss_pred ecCCChH----HHHHHH-HHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-------------------CC
Q 012522 359 INEAFAS----QYVYCI-KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-------------------GK 414 (461)
Q Consensus 359 iheafa~----~~~~~~-e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-------------------~~ 414 (461)
.|...+. .+...+ +.+|-. .+.++.-+..+||+.|++|+.+++.++.+|+.+ ++
T Consensus 311 ~hgtgt~~~D~~E~~Al~~~fg~~--~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~ 388 (418)
T PRK07910 311 AHATGTSVGDVAEGKAINNALGGH--RPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVA 388 (418)
T ss_pred cCCcCCCCCCHHHHHHHHHHhCCC--CCceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCC
Confidence 9998773 344433 344532 223445567899999999999999999999976 10
Q ss_pred ------CCCEEEEEecccCcceeEEEEEE
Q 012522 415 ------DCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 415 ------~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
..+++++++.+-||.+.++||++
T Consensus 389 ~~~~~~~~~~al~nsfGfGG~N~slvl~~ 417 (418)
T PRK07910 389 GEPRPGNYRYAINNSFGFGGHNVALAFGR 417 (418)
T ss_pred CCCcCCCccEEEEeeecCCCeeEEEEEec
Confidence 23678888888888899999875
|
|
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-23 Score=214.42 Aligned_cols=270 Identities=22% Similarity=0.293 Sum_probs=193.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCC-cC----eEEEEeecCCCC---------------------cc--chHHHHHHHHcCC
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSE-VG----DIVVGTVLAPGS---------------------TR--AMECRMAAFYAGF 124 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~-Id----~vi~g~~~~~~~---------------------~~--~~~a~~ia~~lGl 124 (461)
....|+..++++||+++|+++++ ++ ++++|+..+... -. ...+.+++..+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 45689999999999999998877 55 456665432110 01 3456778889998
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
. ++|.++++++|+|+++||..|++.|++|++|++||+|+|.++. ... .+
T Consensus 151 ~-~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~--~~~--------------------~~-------- 199 (407)
T cd00828 151 S-HGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPLE--EGL--------------------SG-------- 199 (407)
T ss_pred C-CCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccCh--HHH--------------------HH--------
Confidence 3 5799999999999999999999999999999999999999772 100 00
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccC-CCCCCCCHHHHhccCCCCCC--
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDD-GIRPNTTIADLAKLKPAFKK-- 281 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de-~~r~~~t~e~l~~~~pvf~~-- 281 (461)
+.+ .+.+ +.++ .+. ..++| |+.
T Consensus 200 ----------------f~~------~~~l------------------------s~~~~~~~--------~~~~p-fd~~~ 224 (407)
T cd00828 200 ----------------FAN------MGAL------------------------STAEEEPE--------EMSRP-FDETR 224 (407)
T ss_pred ----------------HHH------cCCC------------------------CCCCCCCC--------cccCC-CcCCC
Confidence 000 0000 0000 000 13455 544
Q ss_pred CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCC----CCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSV----MGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 282 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~----~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
+|++ ++|||+++||++++.|+++|.+++++|.+++........ .+.+...+++++|+++|++++|||++
T Consensus 225 ~G~~-------~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~a~~~Al~~Agi~~~dId~i 297 (407)
T cd00828 225 DGFV-------EAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARAIRTALAKAGLSLDDLDVI 297 (407)
T ss_pred CcEE-------eecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEE
Confidence 5666 899999999999999999999999999999886543222 23567799999999999999999999
Q ss_pred EecCCChH----HHHHHHHHc-CCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC-----------------
Q 012522 358 EINEAFAS----QYVYCIKKL-GLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK----------------- 414 (461)
Q Consensus 358 eiheafa~----~~~~~~e~L-Gl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~----------------- 414 (461)
+.|...+. .+...++.+ +-...++.++.-+..+||..+++|+.+++.++..|+.+ +|
T Consensus 298 ~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 377 (407)
T cd00828 298 SAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHLSV 377 (407)
T ss_pred ecccccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCcccccccc
Confidence 99988773 333333332 22112333344456789999999999999999999976 11
Q ss_pred -------C--CCEEEEEecccCcceeEEEE
Q 012522 415 -------D--CRFGVISMCIGSGMGAAAVF 435 (461)
Q Consensus 415 -------~--~~~gl~~~~~g~G~g~A~v~ 435 (461)
. .+.++++..+-||.+.+++|
T Consensus 378 ~~~~~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 378 VGLSRDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred cCcCccCCCCccEEEEecccCCCcceEEEC
Confidence 1 26778887777787777764
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.2e-24 Score=204.90 Aligned_cols=270 Identities=24% Similarity=0.348 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcC---CcC----eEEEEeecCCCCc--------------------c-----chHHHHHHHH
Q 012522 74 ADDLLAPVLKAVIEKTRLNPS---EVG----DIVVGTVLAPGST--------------------R-----AMECRMAAFY 121 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~---~Id----~vi~g~~~~~~~~--------------------~-----~~~a~~ia~~ 121 (461)
...|++.|+++||+++++.+. +.| .|.+|+..++..+ . ...+.+++..
T Consensus 94 ~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~ 173 (440)
T KOG1394|consen 94 FTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMK 173 (440)
T ss_pred HHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhh
Confidence 467899999999999998764 333 4666665544320 0 0256688889
Q ss_pred cCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHH
Q 012522 122 AGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSEN 201 (461)
Q Consensus 122 lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 201 (461)
+|+ .+|...++++|++|..+|..|.++|+.|++|++|++|+|..-. |+ ++
T Consensus 174 ~gl--~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~-Pl-----------------------sl---- 223 (440)
T KOG1394|consen 174 YGL--RGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACIN-PL-----------------------SL---- 223 (440)
T ss_pred hcC--cCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeec-ch-----------------------hh----
Confidence 999 7899999999999999999999999999999999999998654 11 11
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC
Q 012522 202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281 (461)
Q Consensus 202 ~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~ 281 (461)
+=.++.||. +.++.+|+. .+|| ||+
T Consensus 224 ---------------aGF~r~RAL---------------St~nd~P~~------------------------aSRP-fD~ 248 (440)
T KOG1394|consen 224 ---------------AGFSRARAL---------------STRNDNPQK------------------------ASRP-FDK 248 (440)
T ss_pred ---------------hhHHHHHHh---------------hhcCCCccc------------------------cCCC-Ccc
Confidence 000111111 111222321 5678 887
Q ss_pred --CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeec-----cCCCCCCCcHHHHHHHHHHHcCCCCCCc
Q 012522 282 --DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAGLQIDDI 354 (461)
Q Consensus 282 --~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~-----~~p~~~~~~~~~ai~~aL~~AGl~~~DI 354 (461)
||++ +|||++.+||++.|.|+++|.+++++++|++..+ +.|+..+.+...+++++|++|||.|+||
T Consensus 249 ~RdGFV-------mGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i 321 (440)
T KOG1394|consen 249 KRDGFV-------MGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDI 321 (440)
T ss_pred CCCcee-------eccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhc
Confidence 8999 9999999999999999999999999999999876 4688888999999999999999999999
Q ss_pred cEEEecCCChHH----HHHHHHH-cCCCC--CCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc---------------
Q 012522 355 NLFEINEAFASQ----YVYCIKK-LGLDP--EKVNVNGGAVALGHPLGATGARCVATLLSEMKRR--------------- 412 (461)
Q Consensus 355 D~~eiheafa~~----~~~~~e~-LGl~~--~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~--------------- 412 (461)
||++-|-..+.. +....+. ++--. .+||.+- -++||.+||.|+.+.+-.+..++..
T Consensus 322 ~YvNAHATST~~GD~aE~~Ai~~vf~~~~~~~~vsStK--gaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~~~ 399 (440)
T KOG1394|consen 322 DYVNAHATSTPLGDAAEAEAIKRVFGEHNIASKVSSTK--GAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDPGV 399 (440)
T ss_pred CeeecccccCcCchHHHHHHHHHHhccCCccccccccc--chhhhhcccccchhhHhhhhhhhcCccCCcccccCCCccc
Confidence 999999776642 2222222 22111 2455554 4589999999999988887777754
Q ss_pred ----C----------CCCCEEEEEecccCcceeEEEEEE
Q 012522 413 ----G----------KDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 413 ----~----------~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+ .+.++++.++++-||.+.+++|..
T Consensus 400 d~~~~~~~~~~~~~~~~~~valsNSFGFGGtNaSl~fa~ 438 (440)
T KOG1394|consen 400 DLDYVPLKASEKKGGNKVRVALSNSFGFGGTNASLCFAK 438 (440)
T ss_pred cccccccccccccccccceEEEecccccCCcchhheeee
Confidence 0 134678888877777777777754
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-22 Score=206.13 Aligned_cols=266 Identities=19% Similarity=0.239 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC-----------cc--------------chHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-----------TR--------------AMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~-----------~~--------------~~~a~~ia~~lGl 124 (461)
...|+..++++||+++|++++.++ +|++|+..+... .+ ...+..++..+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 357889999999999999876654 577776554321 00 1245678889999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
++|+++++++|+|++.||..|++.|++|+ |++|++|+|.... | +.+
T Consensus 151 --~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~-p-----------------------~~~------- 196 (399)
T cd00832 151 --RGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALC-P-----------------------WGW------- 196 (399)
T ss_pred --CCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccC-H-----------------------HHH-------
Confidence 78999999999999999999999999999 9999999998544 0 000
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--C
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D 282 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~ 282 (461)
..+.+ .+.+ +.++.+. ..+|| ||. +
T Consensus 197 --------------~~~~~------~~~l------------------------s~~~~p~--------~~~rP-Fd~~~~ 223 (399)
T cd00832 197 --------------VAQLS------SGRL------------------------STSDDPA--------RAYLP-FDAAAA 223 (399)
T ss_pred --------------HHHHh------cccc------------------------CCCCCCC--------CCcCC-CcCCCC
Confidence 00000 0000 1000000 14567 775 7
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC--CCCCcHHHHHHHHHHHcCCCCCCccEEEec
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS--VMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~--~~~~~~~~ai~~aL~~AGl~~~DID~~eih 360 (461)
|++ ++|||+++||++.+.|+++|.+++++|.|++....... ..+.+...+++++|+++|++++||||++.|
T Consensus 224 G~~-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~a~~~al~~ag~~~~~i~~v~~h 296 (399)
T cd00832 224 GYV-------PGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGSGRPPGLARAIRLALADAGLTPEDVDVVFAD 296 (399)
T ss_pred CEe-------eeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEec
Confidence 888 99999999999999999999999999999988653221 124466789999999999999999999999
Q ss_pred CCCh----HHHHHHHH-HcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C------------------C--
Q 012522 361 EAFA----SQYVYCIK-KLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G------------------K-- 414 (461)
Q Consensus 361 eafa----~~~~~~~e-~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~------------------~-- 414 (461)
-..+ ..+...++ .+|-. ++.++.-+..+||+.+++|+.+++.++..|+.+ + +
T Consensus 297 gtgt~~~D~~E~~al~~~fg~~--~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~~v~~~ 374 (399)
T cd00832 297 AAGVPELDRAEAAALAAVFGPR--GVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLDLVTGR 374 (399)
T ss_pred cCcCCCCCHHHHHHHHHHhCCC--CCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcccCCCc
Confidence 6544 23444443 34432 333444456689999999999999999999976 1 0
Q ss_pred ----CCCEEEEEecccCcceeEEEE
Q 012522 415 ----DCRFGVISMCIGSGMGAAAVF 435 (461)
Q Consensus 415 ----~~~~gl~~~~~g~G~g~A~v~ 435 (461)
..++.+++..+-||.+.++||
T Consensus 375 ~~~~~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 375 PRPAALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred ccCCCCCEEEEeccCCCCcceEEEC
Confidence 246788888777888887765
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.3e-22 Score=203.58 Aligned_cols=270 Identities=20% Similarity=0.268 Sum_probs=191.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCe----EEEEeecCCCC-------------------------ccchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGS-------------------------TRAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~----vi~g~~~~~~~-------------------------~~~~~a~~ia~~lGl 124 (461)
..+|+..|+++||+++|+++++++. +++|+..+... -....+..++..+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 4689999999999999999888774 44444321110 011356778889999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
++|.++++++|+|++.||..|+++|++|++|++|++|+|..... .
T Consensus 152 --~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~-~-------------------------------- 196 (406)
T PRK08439 152 --KGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICP-V-------------------------------- 196 (406)
T ss_pred --CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCH-H--------------------------------
Confidence 68999999999999999999999999999999999999975430 0
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--C
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D 282 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~ 282 (461)
....+.+. +.+. ....+| +. .++| ||. +
T Consensus 197 ------------~~~~f~~~------~~ls-------~~~~~p------------~~------------~~rp-fd~~~~ 226 (406)
T PRK08439 197 ------------GIGGFAAM------KALS-------TRNDDP------------KK------------ASRP-FDKDRD 226 (406)
T ss_pred ------------HHHHHHHh------Cccc-------cCCCCC------------cc------------CcCC-ccCCCC
Confidence 00000000 0000 000000 11 3566 765 7
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCC---CCcHHHHHHHHHHHcCCCCCCccEEEe
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM---GIGPAVAIPAAVKSAGLQIDDINLFEI 359 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~---~~~~~~ai~~aL~~AGl~~~DID~~ei 359 (461)
|++ ++|||+++||++.+.|+++|.+++++|.|++..+...... ..+...+++++|+++|+ +||||++.
T Consensus 227 G~v-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~~~~~~a~~~al~~ag~--~~i~~v~~ 297 (406)
T PRK08439 227 GFV-------MGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEGPLRAMKAALEMAGN--PKIDYINA 297 (406)
T ss_pred cEE-------eeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCHHHHHHHHHHHHHHcCC--CccCEEEc
Confidence 888 8999999999999999999999999999998765322111 13557899999999998 89999999
Q ss_pred cCCChH----HHHHHHHH-cCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C------------------C-
Q 012522 360 NEAFAS----QYVYCIKK-LGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G------------------K- 414 (461)
Q Consensus 360 heafa~----~~~~~~e~-LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~------------------~- 414 (461)
|...+. .+...++. ++-....+.++.-+..+||+.+++|+.+++..+..|+++ + +
T Consensus 298 hgtgt~~~D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~ 377 (406)
T PRK08439 298 HGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDYIPN 377 (406)
T ss_pred cCCcCCCCCHHHHHHHHHHhcccCCCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCcccCCC
Confidence 976553 34444333 332212222333345689999999999999999999977 1 1
Q ss_pred -----CCCEEEEEecccCcceeEEEEEE
Q 012522 415 -----DCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 415 -----~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
..+..+.++.+-||.+.++||++
T Consensus 378 ~~~~~~~~~~l~nsfgfGG~n~~lvl~~ 405 (406)
T PRK08439 378 VARKAELNVVMSNSFGFGGTNGVVIFKK 405 (406)
T ss_pred ccccCCCCEEEEeeecCCCceEEEEEec
Confidence 23667888887788899999875
|
|
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.1e-22 Score=205.13 Aligned_cols=272 Identities=19% Similarity=0.184 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC------------------eEEEEeecC---------------CC---C---ccchH
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG------------------DIVVGTVLA---------------PG---S---TRAME 114 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id------------------~vi~g~~~~---------------~~---~---~~~~~ 114 (461)
...|+..++++||+++|+++.+++ .++.++... .. . ..+..
T Consensus 75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (425)
T PRK06501 75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI 154 (425)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence 456888999999999999654432 111211100 00 0 01235
Q ss_pred HHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCcc
Q 012522 115 CRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLP 194 (461)
Q Consensus 115 a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (461)
+..++..+|+ ++++++++.+|+|++.||..|+++|++|++|++||+|+|.... +
T Consensus 155 a~~i~~~~gl--~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~-~----------------------- 208 (425)
T PRK06501 155 ADRLADRFGT--RGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVS-A----------------------- 208 (425)
T ss_pred HHHHHHHhCC--CCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-H-----------------------
Confidence 6678889999 6899999999999999999999999999999999999996322 0
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhc
Q 012522 195 MGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAK 274 (461)
Q Consensus 195 ~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~ 274 (461)
+.+..|... . .+. ... + .++ ..
T Consensus 209 ----------------~~~~~~~~~---~--------~ls-------~~~-~-----------~~~------------~~ 230 (425)
T PRK06501 209 ----------------EALIRFSLL---S--------ALS-------TQN-D-----------PPE------------KA 230 (425)
T ss_pred ----------------HHHHHHHHh---h--------ccc-------cCC-C-----------CCC------------cc
Confidence 000000000 0 000 000 0 001 13
Q ss_pred cCCCCCC--CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccC-----CCCCCCcHHHHHHHHHHHc
Q 012522 275 LKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSA 347 (461)
Q Consensus 275 ~~pvf~~--~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~ai~~aL~~A 347 (461)
+|| ||. +|++ +||||+++||++.+.|+++|.++++.+.+++..... +...+.....+++++|+++
T Consensus 231 ~rp-fd~~r~G~v-------~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~a 302 (425)
T PRK06501 231 SKP-FSKDRDGFV-------MAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADA 302 (425)
T ss_pred cCC-CCCCCCCee-------eeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHc
Confidence 566 764 6777 899999999999999999999999999998875432 1222334668999999999
Q ss_pred CCCCCCccEEEecCCChHH----HHHHHH-HcCC--CCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C------
Q 012522 348 GLQIDDINLFEINEAFASQ----YVYCIK-KLGL--DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G------ 413 (461)
Q Consensus 348 Gl~~~DID~~eiheafa~~----~~~~~e-~LGl--~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~------ 413 (461)
|++++|||+++.|...+.. +...++ .++- ...+||..++. +||+.+|+|+.+++.++..|+.+ +
T Consensus 303 gi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~--~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~ 380 (425)
T PRK06501 303 GLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSM--IGHTLTAAGAVEAVFSLLTIQTGRLPPTINY 380 (425)
T ss_pred CCCHHHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEECCCcc--cCCCchhhhHHHHHHHHHHHhcCcCCCcCCC
Confidence 9999999999999987653 222222 2332 12467766665 59999999999999999999986 1
Q ss_pred ------------C------CCCEEEEEecccCcceeEEEEEEcc
Q 012522 414 ------------K------DCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 414 ------------~------~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
+ +.+..+.+..+-||.+.++||++..
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 381 DNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred CCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEEEEecCC
Confidence 1 2356677777778888999998763
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=202.50 Aligned_cols=253 Identities=19% Similarity=0.213 Sum_probs=175.7
Q ss_pred eeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCC
Q 012522 57 YRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQ 136 (461)
Q Consensus 57 ~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~ 136 (461)
.+|++.+ +....+++++.+|+.+|+++||+++|++|++||.|++++++++.. ...+..++..+|+. +.++++++.+
T Consensus 35 ~~~gi~~-r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~--~~~~~~v~~~Lg~~-~~~~~~v~~~ 110 (326)
T CHL00203 35 TRTGIKK-RHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDL--FGSASQLQAEIGAT-RAVAFDITAA 110 (326)
T ss_pred eccCeEE-EEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC--CchHHHHHHHhCCC-CCceeeeccc
Confidence 6788876 456678899999999999999999999999999999998777654 23456788899995 5789999999
Q ss_pred CchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHH
Q 012522 137 CSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLA 216 (461)
Q Consensus 137 CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~ 216 (461)
|+|++.+|..|.++|++|.++++||+|+|.+|..
T Consensus 111 Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~---------------------------------------------- 144 (326)
T CHL00203 111 CSGFILALVTATQFIQNGSYKNILVVGADTLSKW---------------------------------------------- 144 (326)
T ss_pred chhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCc----------------------------------------------
Confidence 9999999999999999999999999999999871
Q ss_pred HHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCccccc
Q 012522 217 AVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDG 296 (461)
Q Consensus 217 a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DG 296 (461)
++ .++ + .+...+|||
T Consensus 145 ----------------~~------------------------~~~-------------------~------~~~~~fgDg 159 (326)
T CHL00203 145 ----------------ID------------------------WSD-------------------R------KTCILFGDG 159 (326)
T ss_pred ----------------CC------------------------ccc-------------------C------CceEEEcce
Confidence 00 000 0 011127999
Q ss_pred ceEEEEcchhHHHhcCCCeeEEEEEee--------ee---------c--cCCC-CC------C-----C---cHHHHHHH
Q 012522 297 AGAVLLMKRSLAVQKGLPILGVFRSFS--------AV---------G--VDPS-VM------G-----I---GPAVAIPA 342 (461)
Q Consensus 297 AaAvvL~s~~~A~~~g~~~~a~i~g~~--------~~---------~--~~p~-~~------~-----~---~~~~ai~~ 342 (461)
|+|+||.+.+.. + ++..-.... .. + ..|. .+ + . ....++++
T Consensus 160 a~A~ll~~~~~~---~--~~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 234 (326)
T CHL00203 160 AGAAIIGASYEN---S--ILGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIK 234 (326)
T ss_pred eeEEEEEEcCCC---C--eEEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHH
Confidence 999999875421 1 111000000 00 0 0000 00 0 0 12347889
Q ss_pred HHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc--C-CCCCEE
Q 012522 343 AVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR--G-KDCRFG 419 (461)
Q Consensus 343 aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~--~-~~~~~g 419 (461)
+|+++|++++|||+|.+|+.+........+.||++++++..+ .--+||...++-. ..+.++.+. . ++.++.
T Consensus 235 ~L~~~g~~~~did~~~~hq~~~~~~~~~~~~lgl~~~k~~~~--l~~~Gn~~sasi~----~~L~~~~~~g~~~~Gd~vl 308 (326)
T CHL00203 235 CLNALNISIDEVDWFILHQANKRILEAIANRLSVPNSKMITN--LEKYGNTSAASIP----LALDEAIQNNKIQPGQIIV 308 (326)
T ss_pred HHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhH--HHhhCcHHHHHHH----HHHHHHHHhCCCCCCCEEE
Confidence 999999999999999999999999999999999998886432 2456666655533 333333222 2 344444
Q ss_pred EEEecccCcceeEEEEEE
Q 012522 420 VISMCIGSGMGAAAVFER 437 (461)
Q Consensus 420 l~~~~~g~G~g~A~v~~~ 437 (461)
++++ |.|..+..++.+
T Consensus 309 l~~~--G~G~s~~~~v~~ 324 (326)
T CHL00203 309 LSGF--GAGLTWGAIVLK 324 (326)
T ss_pred EEEE--chhhhheEEEEE
Confidence 4443 666665444443
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-21 Score=201.16 Aligned_cols=267 Identities=20% Similarity=0.270 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHHHHcCCCc-CCcC----eEEEEeecCCCC--------------c-----------cchHHHHHHHHcC
Q 012522 74 ADDLLAPVLKAVIEKTRLNP-SEVG----DIVVGTVLAPGS--------------T-----------RAMECRMAAFYAG 123 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~-~~Id----~vi~g~~~~~~~--------------~-----------~~~~a~~ia~~lG 123 (461)
...|+..|+++||+++|++. ..++ +|++|+..+... . ....+..++..+|
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 152 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFG 152 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhC
Confidence 35688999999999999843 2222 577887543210 0 0125667888999
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
+ ++|+++++++|+|+++||..|+++|++|++|++||+|+|..+.... .++
T Consensus 153 ~--~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~----------------------~~f------ 202 (405)
T PRK09116 153 L--KGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEA----------------------AVF------ 202 (405)
T ss_pred C--CCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHH----------------------HHH------
Confidence 9 7899999999999999999999999999999999999998654100 000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-- 281 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-- 281 (461)
. ..... . ....+| + ..++| ||.
T Consensus 203 ------------------~-~l~~~-~-----------~~~~~~------------~------------~~~rP-fd~~~ 226 (405)
T PRK09116 203 ------------------D-TLFAT-S-----------TRNDAP------------E------------LTPRP-FDANR 226 (405)
T ss_pred ------------------H-Hhhhh-c-----------cCCCCC------------C------------CCCCC-CcCCC
Confidence 0 00000 0 000000 0 13466 765
Q ss_pred CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCC---CCCcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSV---MGIGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 282 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~---~~~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
+|++ +||||+++||++.+.|+++|.+++++|.|++........ ...+...+++++|+++|++++|||+++
T Consensus 227 ~G~v-------~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p~~~~~~~ai~~AL~~Agi~p~dId~I~ 299 (405)
T PRK09116 227 DGLV-------IGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQIAMELALKDAGLAPEDIGYVN 299 (405)
T ss_pred CCEe-------eeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCCCHHHHHHHHHHHHHHhCCCHHHcCEEE
Confidence 7888 899999999999999999999999999999886532221 223456899999999999999999999
Q ss_pred ecCCChH----HHHHHH-HHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC------------------
Q 012522 359 INEAFAS----QYVYCI-KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK------------------ 414 (461)
Q Consensus 359 iheafa~----~~~~~~-e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~------------------ 414 (461)
.|...+. .+...+ +.+| . ++.++.-+..+||+.|++|+.+++..+..|+.+ +|
T Consensus 300 ~Hgtgt~~~D~~E~~Ai~~~fg-~--~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~v 376 (405)
T PRK09116 300 AHGTATDRGDIAESQATAAVFG-A--RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYI 376 (405)
T ss_pred CcCccCCCCCHHHHHHHHHHhC-C--CCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCcc
Confidence 9987663 333333 3334 2 233344456789999999999999999999976 10
Q ss_pred -------CCCEEEEEecccCcceeEEEEE
Q 012522 415 -------DCRFGVISMCIGSGMGAAAVFE 436 (461)
Q Consensus 415 -------~~~~gl~~~~~g~G~g~A~v~~ 436 (461)
+.++.|.++++-||.+.++||+
T Consensus 377 ~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 377 MGEAREIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred CCCCccCCCCEEEEeeecCCcccEEEEEC
Confidence 2356788887778888888873
|
|
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-22 Score=207.67 Aligned_cols=242 Identities=22% Similarity=0.319 Sum_probs=176.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCe----EEEEeecCCCC------------------ccchHHHHHHHHcCCCCCCCeE
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGS------------------TRAMECRMAAFYAGFPETVPLR 131 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~----vi~g~~~~~~~------------------~~~~~a~~ia~~lGl~~~~~~~ 131 (461)
..+|+.+|+++||+++|++++++|. +++|+..+++. .....+..++..+|+ +.|.+
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl--~g~~~ 164 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDL--RGPSL 164 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCC--CCCce
Confidence 4789999999999999999988875 77776543210 012356678899999 57999
Q ss_pred EeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHH
Q 012522 132 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQ 211 (461)
Q Consensus 132 ~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre 211 (461)
+++.+|+|++.||..|+++|++|.+|++||+|+|.+.... ..
T Consensus 165 ~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~------------------------~~-------------- 206 (421)
T cd00833 165 TVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPD------------------------MF-------------- 206 (421)
T ss_pred eeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHH------------------------HH--------------
Confidence 9999999999999999999999999999999999865410 00
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCccccCC
Q 012522 212 EQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGN 289 (461)
Q Consensus 212 ~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~lt~~~ 289 (461)
..+.. .+. ++++. .++| |+. +|++
T Consensus 207 -------~~~~~------~~~------------------------l~~~~------------~~~p-f~~~~~g~~---- 232 (421)
T cd00833 207 -------VGFSK------AGM------------------------LSPDG------------RCRP-FDADADGYV---- 232 (421)
T ss_pred -------HHHhh------CCC------------------------CCCCC------------CCCC-CCCCCCCee----
Confidence 00000 000 01010 2344 543 5666
Q ss_pred CCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCC-----CCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCCh
Q 012522 290 ASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-----SVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFA 364 (461)
Q Consensus 290 ~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa 364 (461)
++|||+++||++++.|++++.+++++|.+++...... .....+...+++++|+++|++++|||+++.|...+
T Consensus 233 ---~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt 309 (421)
T cd00833 233 ---RGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGT 309 (421)
T ss_pred ---eeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCC
Confidence 8999999999999999999999999999988754321 11233556899999999999999999999998876
Q ss_pred HH----HHHHHHHc-CCC---CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc
Q 012522 365 SQ----YVYCIKKL-GLD---PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR 412 (461)
Q Consensus 365 ~~----~~~~~e~L-Gl~---~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~ 412 (461)
.. +...++.+ +-. ..++..+.-+..+||+.+++|+.+++.++.+|+.+
T Consensus 310 ~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~ 365 (421)
T cd00833 310 PLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHG 365 (421)
T ss_pred CCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcC
Confidence 42 22222222 111 12344444456799999999999999999999976
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-21 Score=197.30 Aligned_cols=263 Identities=19% Similarity=0.189 Sum_probs=186.8
Q ss_pred CCCHHHHHHHHHHHHHHHcC-CCcCCcCeEEEEee-----cCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHH
Q 012522 71 DTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTV-----LAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAV 144 (461)
Q Consensus 71 ~~~~~eL~~~A~~~AL~~ag-l~~~~Id~vi~g~~-----~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al 144 (461)
+....+|+..|++++|++++ +++++||.+++... .++.. .+.....++.++|+....+.++++.+|+|+++||
T Consensus 62 ~~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~-~~~~~~~~~~~lG~~~~~~~~~i~~~casg~~Al 140 (348)
T PRK06147 62 PERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDL-EERLLRELEARLGLRLEPGSAVIARGRVSGAVAL 140 (348)
T ss_pred hHHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcch-HHHHHHHHHHHhCCCCCCCcccccccchHHHHHH
Confidence 34678999999999999999 78999998776432 11111 2234667888999865578899999999999999
Q ss_pred HHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Q 012522 145 ADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRA 224 (461)
Q Consensus 145 ~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A 224 (461)
..|+++|++|++|.+||+|+|.++.... + ..+..
T Consensus 141 ~~A~~~i~~G~~~~~lvgg~d~~~~~~~------------------------~---------------------~~~~~- 174 (348)
T PRK06147 141 AQARRLIAAGGCPRVLVAGVDSLLTGPT------------------------L---------------------AHYEA- 174 (348)
T ss_pred HHHHHHHHcCCCCEEEEEeeccccCHHH------------------------H---------------------HHHHH-
Confidence 9999999999999999999999876110 0 00000
Q ss_pred HHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcc
Q 012522 225 AAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMK 304 (461)
Q Consensus 225 ~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s 304 (461)
. ...+ +. -+.+|++ +||||+++||++
T Consensus 175 ---~-~~l~------------------------~~-------------------~~~~G~v-------~GEGA~a~vLe~ 200 (348)
T PRK06147 175 ---R-DRLL------------------------TS-------------------QNSNGFI-------PGEAAAAVLLGR 200 (348)
T ss_pred ---h-hccC------------------------CC-------------------CCCCcee-------eeceEEEEEEcc
Confidence 0 0000 00 0125667 899999999999
Q ss_pred hhHHHhcCCCeeEEEEEeeeeccC------CCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChH----HHHHH-HHH
Q 012522 305 RSLAVQKGLPILGVFRSFSAVGVD------PSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFAS----QYVYC-IKK 373 (461)
Q Consensus 305 ~~~A~~~g~~~~a~i~g~~~~~~~------p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~----~~~~~-~e~ 373 (461)
.+.|++++.++++ .+++..... +...+.+...+++++|+++|++++|||+++.|-.... .+... .+.
T Consensus 201 ~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~ 278 (348)
T PRK06147 201 PAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRL 278 (348)
T ss_pred HhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHH
Confidence 9999999999887 444332211 1113456789999999999999999999998865332 22222 223
Q ss_pred cCCC--CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CCCCCEEEEEecccCcceeEEEEEEcc
Q 012522 374 LGLD--PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GKDCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 374 LGl~--~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
++-. ..+++. =+..+||..+|+|+.+++.++.+|+++ .|+.+ .|+.+..-.|.=.|++|++.+
T Consensus 279 f~~~~~~~~~~~--~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~-~L~~s~~d~g~r~a~~l~~~~ 344 (348)
T PRK06147 279 FRVRKEFFDLWH--PAECIGEIGAAIGPALLGVALAASRKGYGPGPN-VLCHLSDDDGARAALVLEYRR 344 (348)
T ss_pred hhhccCCCceec--chHhhcchHHHHHHHHHHHHHHHHHcCcCCCCc-EEEEecCCCCceEEEEEeccc
Confidence 3332 223443 346699999999999999999999987 55554 555555566667888888764
|
|
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.2e-21 Score=194.28 Aligned_cols=234 Identities=14% Similarity=0.077 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCCc-------------------------------------cc
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGST-------------------------------------RA 112 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~~-------------------------------------~~ 112 (461)
...|+..|+++||+|+|+++.+.+ .+++|+..+.... ..
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 456889999999999999654322 4677776543110 01
Q ss_pred hHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccC
Q 012522 113 MECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCL 192 (461)
Q Consensus 113 ~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~ 192 (461)
..+..++..+|+ ++|+++++++|+|++.||..|+++|++|++|++||+|+|.... +.
T Consensus 153 ~~a~~is~~~gl--~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~-~~-------------------- 209 (398)
T PRK06519 153 LLAGNISIVHKV--TGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAER-PD-------------------- 209 (398)
T ss_pred HHHHHHHHHhCC--CCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HH--------------------
Confidence 256678889999 7899999999999999999999999999999999999997543 00
Q ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHH
Q 012522 193 LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL 272 (461)
Q Consensus 193 ~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l 272 (461)
.+ ..+.. .+.+. .+
T Consensus 210 ---~~---------------------~~~~~------~~~ls------------------------~~------------ 223 (398)
T PRK06519 210 ---ML---------------------LLYEL------GGLLL------------------------KG------------ 223 (398)
T ss_pred ---HH---------------------HHHHH------cCccC------------------------CC------------
Confidence 00 00000 00000 00
Q ss_pred hccCCCCC-----CCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHc
Q 012522 273 AKLKPAFK-----KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSA 347 (461)
Q Consensus 273 ~~~~pvf~-----~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~A 347 (461)
..+|.|+ .+|++ ++|||+++||++.+.|+++|.+++++|.|++.... +. ...+...+++++|+++
T Consensus 224 -~~~p~~d~~~~~r~G~v-------~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~-~~-~~~~~~~am~~AL~~A 293 (398)
T PRK06519 224 -GWAPVWSRGGEDGGGFI-------LGSGGAFLVLESREHAEARGARPYARISGVESDRA-RR-APGDLEASLERLLKPA 293 (398)
T ss_pred -CCCchhccCccCCCCee-------eeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCC-CC-ChHHHHHHHHHHHHHC
Confidence 1122232 47888 89999999999999999999999999999965332 22 2346678999999999
Q ss_pred CCCCCCccEEEecCCCh----HHHHHHHHH-cCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc
Q 012522 348 GLQIDDINLFEINEAFA----SQYVYCIKK-LGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR 412 (461)
Q Consensus 348 Gl~~~DID~~eiheafa----~~~~~~~e~-LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~ 412 (461)
|+ ++||||++.|-..+ ..+...++. ++ .+|+.. +..+||.++++|+..++.++..|+.+
T Consensus 294 gl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~---~pvsS~--Ks~~GH~l~AAGa~e~i~~~lal~~g 357 (398)
T PRK06519 294 GG-LAAPTAVISGATGAHPATAEEKAALEAALA---GPVRGI--GTLFGHTMEAQFPLGLALAALSVSKG 357 (398)
T ss_pred CC-cccCCEEEeCCCCCCCccHHHHHHHHHHcC---CCcccc--chhhccchHHHHHHHHHHHHHHHhcC
Confidence 99 89999999997654 334444443 34 244443 45689999999999999999999987
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-21 Score=196.73 Aligned_cols=242 Identities=17% Similarity=0.272 Sum_probs=173.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
+++++.+|+.+|+++||+++|+++++||.+++++..++.. .+..+..++..+|++.+.+.++++.+|+++..+|..|..
T Consensus 46 ~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~-~p~~a~~v~~~LGl~~~~~~~dv~~aC~g~~~al~~A~~ 124 (345)
T TIGR00748 46 LDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYA-VKPTATIVAEAIGATPDLTAADLEFACKAGTAGIQACMG 124 (345)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcc-ccchHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998777655 566677899999996568899999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++++||++.|.++..+.
T Consensus 125 ~i~sg~~~~vLVv~~d~~~~~~~--------------------------------------------------------- 147 (345)
T TIGR00748 125 LVASGMIKYGLAIGADTAQGAPG--------------------------------------------------------- 147 (345)
T ss_pred HHHcCCCCEEEEEEEeecccCCC---------------------------------------------------------
Confidence 99999999999999998764100
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
+ +..| . +||||+|+||...+..
T Consensus 148 -------------------------------~--------------~~~~-----~-------~GDGAaA~vl~~~~~~- 169 (345)
T TIGR00748 148 -------------------------------D--------------ALEY-----T-------AGAGGAAYIIGEKNTV- 169 (345)
T ss_pred -------------------------------c--------------cCcc-----c-------CCCceEEEEEccCCcc-
Confidence 0 0001 1 6999999999864321
Q ss_pred hcCCCeeEEEEEeeeecc----------C--CC----CCC-----CcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHH
Q 012522 310 QKGLPILGVFRSFSAVGV----------D--PS----VMG-----IGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYV 368 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~~~----------~--p~----~~~-----~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~ 368 (461)
..+.+...... . +. ..+ .....+++++|+++|++++|||+|.+|+++..+..
T Consensus 170 -------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~~~~~ 242 (345)
T TIGR00748 170 -------AYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNGKFYL 242 (345)
T ss_pred -------eEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCChHHHH
Confidence 01111100000 0 10 000 01226788999999999999999999999999988
Q ss_pred HHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCccee-EEEEEEcc
Q 012522 369 YCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA-AAVFERGD 439 (461)
Q Consensus 369 ~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~-A~v~~~~~ 439 (461)
...+.||++++++..+=-.--+||...++-...+.+++.+++ +|.++.++.+ |.|..+ +++++-.|
T Consensus 243 ~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~~~---~Gd~vll~~~--G~G~s~~~~~~~~~~ 309 (345)
T TIGR00748 243 VAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLDIAE---PGDRILAVSY--GSGAGSDAFSIVVQD 309 (345)
T ss_pred HHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHHhcC---CCCEEEEEEe--cCCcceeEEEEEEch
Confidence 899999999887644210135788777776666666554332 2444444443 556554 45554443
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=198.16 Aligned_cols=259 Identities=21% Similarity=0.232 Sum_probs=172.4
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
.+.++.+|+.+|+++||+++|+++++||.|+++++++++. .+..+..++..+|++.++++++++.+|+|++.||..|.+
T Consensus 57 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~-~p~~a~~v~~~lgl~~~~~~~~v~~~C~~~~~al~~A~~ 135 (338)
T PRK09258 57 EGTQLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYL-EPATACRVHHNLGLPKSCANFDVSNACLGFLNGMLDAAN 135 (338)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHcCCCCCCceeehhhhhHHHHHHHHHHHH
Confidence 4778999999999999999999999999999999887766 677889999999997668999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++.+||+++|.++... +..
T Consensus 136 ~i~~g~~~~~Lvv~~e~~s~~~-~~~------------------------------------------------------ 160 (338)
T PRK09258 136 MIELGQIDYALVVSGESAREIV-EAT------------------------------------------------------ 160 (338)
T ss_pred HHHcCCCCEEEEEEecccchhc-cch------------------------------------------------------
Confidence 9999999999999999987610 000
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
|.. +..++ .+.+.+.+. | ...+ +||||+|+||.+.+..
T Consensus 161 ---~~~---------------------~~~~~-----~~~~~~~~~---~--~~~~-------~GDGA~A~ll~~~~~~- 198 (338)
T PRK09258 161 ---IDR---------------------LLAPE-----TTREDFAQS---F--ATLT-------LGSGAAAAVLTRGSLH- 198 (338)
T ss_pred ---hhh---------------------hccCc-----cchhhhhhc---c--ceEE-------ecccceEEEEecCCCC-
Confidence 000 00000 000000000 1 1123 7999999999976421
Q ss_pred hcCCCeeEEEEEeeeeccC-----CCCCC-----------CcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHH
Q 012522 310 QKGLPILGVFRSFSAVGVD-----PSVMG-----------IGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKK 373 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~~~~-----p~~~~-----------~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~ 373 (461)
..+...+...........+ ...+. .....+++++|+++|++++|||+|.+|+.+........+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~~~~~~~~~~~ 278 (338)
T PRK09258 199 PRGHRLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQVGAAHTRAILKA 278 (338)
T ss_pred CCcceeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCCHHHHHHHHHH
Confidence 1111111111100000000 00000 0122578899999999999999999999999999999999
Q ss_pred cCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccC-CCCCEEEEEecccCcceeE
Q 012522 374 LGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRG-KDCRFGVISMCIGSGMGAA 432 (461)
Q Consensus 374 LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~-~~~~~gl~~~~~g~G~g~A 432 (461)
||++++++..+- --+||..+++-...+.+++.+ ++. +|.++.++++ |.|....
T Consensus 279 lgl~~~k~~~~~--~~~GN~~sas~~~~L~~~~~~--g~~~~Gd~vll~~~--G~G~s~~ 332 (338)
T PRK09258 279 LGIDPEKVFTTF--PTLGNMGPASLPITLAMAAEE--GFLKPGDRVALLGI--GSGLNCS 332 (338)
T ss_pred hCCCHHHceehH--hhhCCcHHhHHHHHHHHHHHh--CCCCCCCEEEEEEe--chhHhhH
Confidence 999988864432 247777777655444444332 112 3444444443 5554443
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.2e-21 Score=193.06 Aligned_cols=243 Identities=18% Similarity=0.228 Sum_probs=169.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCC-CCCeEEeCCCCchHHHHHHHHHH
Q 012522 71 DTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE-TVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 71 ~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~-~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
+.++.+|+.+|+++||+++|++++|||.+++++.+++.. .+..+..++..+|++. .+++++++.+|+|++.+|..|..
T Consensus 49 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~-~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~~ 127 (329)
T PRK07204 49 GETSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQA-IPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISY 127 (329)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHHH
Confidence 578899999999999999999999999999998877665 5677888999999964 36999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++.+||+++|.++..
T Consensus 128 ~l~~g~~~~~Lvv~~e~~s~~----------------------------------------------------------- 148 (329)
T PRK07204 128 AIECGRYKRVLIISSEISSVG----------------------------------------------------------- 148 (329)
T ss_pred HHHCCCCCEEEEEEeccccCC-----------------------------------------------------------
Confidence 999999999999999997751
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
++ .+ . .+.+.+ +||||+|+||++.+..
T Consensus 149 ---~~------------------------~~-------------~-----~~~~~l-------fGDGAaA~ll~~~~~~- 175 (329)
T PRK07204 149 ---LN------------------------WG-------------Q-----NESCIL-------FGDGAAAVVITKGDHS- 175 (329)
T ss_pred ---CC------------------------cc-------------c-----CcceEE-------EecccEEEEEEEcCCC-
Confidence 00 00 0 000123 7999999999976431
Q ss_pred hcCCCeeE-------------EEEEeeeec-----cCCCC------C-CC--------cHHHHHHHHHHHcCCCCCCccE
Q 012522 310 QKGLPILG-------------VFRSFSAVG-----VDPSV------M-GI--------GPAVAIPAAVKSAGLQIDDINL 356 (461)
Q Consensus 310 ~~g~~~~a-------------~i~g~~~~~-----~~p~~------~-~~--------~~~~ai~~aL~~AGl~~~DID~ 356 (461)
..++. .+.+.+... ..+.. + +. ....+++++|+++|++++|||+
T Consensus 176 ---~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~ 252 (329)
T PRK07204 176 ---SRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTLADIDL 252 (329)
T ss_pred ---CcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 11211 111111100 00000 0 00 1237889999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccC-CCCCEEEEEecccCccee-EEE
Q 012522 357 FEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRG-KDCRFGVISMCIGSGMGA-AAV 434 (461)
Q Consensus 357 ~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~-~~~~~gl~~~~~g~G~g~-A~v 434 (461)
|.+|+.+........+.||++++++..+ ..-+||...++-...+.+++++ ++. +|.++.++++ |.|..+ +++
T Consensus 253 ~~~H~~~~~~~~~i~~~l~l~~e~~~~~--~~~~Gn~~sas~~~~L~~~~~~--g~~~~Gd~vll~~~--G~G~s~~~~l 326 (329)
T PRK07204 253 IVPHQASGPAMRLIRKKLGVDEERFVTI--FEDHGNMIAASIPVALFEAIKQ--KKVQRGNKILLLGT--SAGLSIGGIL 326 (329)
T ss_pred EEeCCCCHHHHHHHHHHcCCCHHHhhhh--HhhhCcHHHHHHHHHHHHHHHc--CCCCCCCEEEEEEE--chhhhheeeE
Confidence 9999999999999999999998875422 2456777666544333333222 112 3444444443 555544 344
Q ss_pred E
Q 012522 435 F 435 (461)
Q Consensus 435 ~ 435 (461)
|
T Consensus 327 l 327 (329)
T PRK07204 327 L 327 (329)
T ss_pred E
Confidence 4
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.7e-21 Score=192.55 Aligned_cols=255 Identities=23% Similarity=0.241 Sum_probs=178.2
Q ss_pred eccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCC
Q 012522 58 RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQC 137 (461)
Q Consensus 58 ~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~C 137 (461)
+|+|.+ +....++.++.+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|+ ...++++++.+|
T Consensus 37 ~~gi~~-r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~-~~~~~~~i~~~lG~-~~~~~~~v~~~C 113 (319)
T PRK09352 37 RTGIKE-RRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYA-FPSTACLVQARLGA-KNAAAFDLSAAC 113 (319)
T ss_pred hcCeEE-EEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CchHHHHHHHHhCC-CCCcEeeccccc
Confidence 567654 334567889999999999999999999999999999998877654 45677889999999 467999999999
Q ss_pred chHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHH
Q 012522 138 SSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAA 217 (461)
Q Consensus 138 aSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a 217 (461)
+|++.||..|+++|++|.+|++||+|+|.++..
T Consensus 114 asg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----------------------------------------------- 146 (319)
T PRK09352 114 SGFVYALSTADQFIRSGAYKNVLVIGAEKLSRI----------------------------------------------- 146 (319)
T ss_pred hhHHHHHHHHHHHHHcCCCCEEEEEEehhhccc-----------------------------------------------
Confidence 999999999999999999999999999998761
Q ss_pred HHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccc
Q 012522 218 VESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGA 297 (461)
Q Consensus 218 ~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGA 297 (461)
++ . .++ .++..+||||
T Consensus 147 ---------------~~------------------------~-------------------~~~------~~~~~~gDGa 162 (319)
T PRK09352 147 ---------------VD------------------------W-------------------TDR------STCVLFGDGA 162 (319)
T ss_pred ---------------cC------------------------c-------------------ccC------CceEEEeccc
Confidence 00 0 000 0011279999
Q ss_pred eEEEEcchhHHHhcCCCeeEEEEEeeeec---cCCCC-------------CCC--------cHHHHHHHHHHHcCCCCCC
Q 012522 298 GAVLLMKRSLAVQKGLPILGVFRSFSAVG---VDPSV-------------MGI--------GPAVAIPAAVKSAGLQIDD 353 (461)
Q Consensus 298 aAvvL~s~~~A~~~g~~~~a~i~g~~~~~---~~p~~-------------~~~--------~~~~ai~~aL~~AGl~~~D 353 (461)
+|+||++.+.. ++.. ..+...+... ..|.. .+. ....+++++|+++|++++|
T Consensus 163 aA~ll~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~d 238 (319)
T PRK09352 163 GAVVLGASEEP---GILS-THLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGLTPED 238 (319)
T ss_pred eEEEEEEcCCC---CeEE-EEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 99999986532 1110 1111111000 00100 011 1235888999999999999
Q ss_pred ccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccC-CCCCEEEEEecccCccee-
Q 012522 354 INLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRG-KDCRFGVISMCIGSGMGA- 431 (461)
Q Consensus 354 ID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~-~~~~~gl~~~~~g~G~g~- 431 (461)
||+|.+|..+........+.||++.+++..+ .--+||..+++-...+..++.. ++. +|.++.++++ |.|..+
T Consensus 239 i~~~~~h~~~~~~~~~~~~~lg~~~~~~~~~--~~~~Gn~~~a~~~~~L~~~~~~--g~~~~Gd~vll~s~--G~G~~~~ 312 (319)
T PRK09352 239 IDWLVPHQANLRIIDATAKKLGLPMEKVVVT--VDKYGNTSAASIPLALDEAVRD--GRIKRGDLVLLEGF--GGGLTWG 312 (319)
T ss_pred CCEEEECCCCHHHHHHHHHHhCCCHHHhhhh--HHhhCCHHHHHHHHHHHHHHHc--CCCCCCCEEEEEEE--chhheeE
Confidence 9999999999998899999999998886433 2357888777754444444321 122 2344444443 555554
Q ss_pred EEEEE
Q 012522 432 AAVFE 436 (461)
Q Consensus 432 A~v~~ 436 (461)
+++|+
T Consensus 313 ~~ll~ 317 (319)
T PRK09352 313 AALVR 317 (319)
T ss_pred EEEEE
Confidence 44443
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-20 Score=193.41 Aligned_cols=268 Identities=17% Similarity=0.210 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC------------c--------------cchHHHHHHHHcC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS------------T--------------RAMECRMAAFYAG 123 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~------------~--------------~~~~a~~ia~~lG 123 (461)
...++..|+++||+++|+++++++ ++++|+..+... . ....+..++..+|
T Consensus 71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~ 150 (406)
T PRK07967 71 ASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK 150 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence 457889999999999999765444 466776432210 0 0125677888999
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
+ ++|.++++++|+|++.||..|+++|++|++|++|++|+|..+.... .++
T Consensus 151 l--~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~----------------------~~f------ 200 (406)
T PRK07967 151 I--KGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMS----------------------CLF------ 200 (406)
T ss_pred C--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHH----------------------HHH------
Confidence 9 7899999999999999999999999999999999999997544100 000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-- 281 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-- 281 (461)
. +... + +.+. -.+++. .+|| ||.
T Consensus 201 ------------------~-~~~~-----l-------s~~~-----------~~~p~~------------~~rP-Fd~~r 225 (406)
T PRK07967 201 ------------------D-AMGA-----L-------STKY-----------NDTPEK------------ASRA-YDANR 225 (406)
T ss_pred ------------------H-Hhhh-----h-------ccCC-----------CCCCCc------------CCcC-CcCCC
Confidence 0 0000 0 0000 000111 3566 775
Q ss_pred CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCC---CCCcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSV---MGIGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 282 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~---~~~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
+|++ ++|||+++||++.+.|+++|.+++++|.|++........ .+.+...+++++|+.++ + ||||++
T Consensus 226 ~G~v-------~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p~~~~~~~a~~~Al~~~~--~-~Idyi~ 295 (406)
T PRK07967 226 DGFV-------IAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAVRCMQMALATVD--T-PIDYIN 295 (406)
T ss_pred Ccee-------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHhCCC--C-CccEEE
Confidence 7888 899999999999999999999999999999886532221 24456789999998654 4 999999
Q ss_pred ecCCCh----HHHHHHHHH-cCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC------------------
Q 012522 359 INEAFA----SQYVYCIKK-LGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK------------------ 414 (461)
Q Consensus 359 iheafa----~~~~~~~e~-LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~------------------ 414 (461)
.|-.-+ ..+...++. +|- .++.++.-+..+||..||+|+.+++.++..|+.+ +|
T Consensus 296 aHgtGT~~~D~~E~~Ai~~~fg~--~~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~~ 373 (406)
T PRK07967 296 THGTSTPVGDVKELGAIREVFGD--KSPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIV 373 (406)
T ss_pred cCCCCCCCCCHHHHHHHHHHhCC--CCCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCcc
Confidence 986544 234433333 342 2223444456799999999999999999999976 11
Q ss_pred -------CCCEEEEEecccCcceeEEEEEEc
Q 012522 415 -------DCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 415 -------~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
..++.+++..+.||.+.++||++.
T Consensus 374 ~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~~ 404 (406)
T PRK07967 374 TETTDNAELTTVMSNSFGFGGTNATLVFRRY 404 (406)
T ss_pred CCCCcCCCCCEEEEecccCCCeeEEEEEEec
Confidence 235678888777888999999875
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.8e-21 Score=195.52 Aligned_cols=97 Identities=14% Similarity=0.201 Sum_probs=87.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHH
Q 012522 71 DTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATA 150 (461)
Q Consensus 71 ~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~ 150 (461)
+.++.+|+.+|+++||+++|++++|||.++++++.+++. .+..+..++..+|++ ..++++++.+|+|++.+|..|..+
T Consensus 60 ~~~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~-~p~~a~~v~~~Lgl~-~~~~~~v~~~Cas~~~al~~A~~~ 137 (378)
T PRK06816 60 THSNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQL-MPGHASMVHGELGAP-PIEVVSSAGVCAAGMMALKYAYLS 137 (378)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcC-ChHHHHHHHhhCCCC-CCceeeecCcCHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999887654 454556788899996 478999999999999999999999
Q ss_pred HHcCCCCEEEEEeeccccc
Q 012522 151 IKAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~~s~ 169 (461)
|++|.++++||+|+|.+|.
T Consensus 138 i~sg~~~~vLvv~~E~~s~ 156 (378)
T PRK06816 138 VKAGESRNAVATASELASR 156 (378)
T ss_pred HHCCCCCEEEEEeEccchh
Confidence 9999999999999999987
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.8e-21 Score=196.94 Aligned_cols=253 Identities=22% Similarity=0.251 Sum_probs=172.6
Q ss_pred eccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCC
Q 012522 58 RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQC 137 (461)
Q Consensus 58 ~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~C 137 (461)
+|++.+ +....++.++.+|+.+|+++||+++|++++|||.|++++++++.. +..+..++..||++ +.++++++.+|
T Consensus 81 ~tGi~~-R~~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~--~~~a~~v~~~LG~~-~~~~~dv~~~C 156 (379)
T PLN02326 81 RTGIRN-RRVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDL--FGSAPQVQAALGCT-NALAFDLTAAC 156 (379)
T ss_pred ccCcce-EeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcc--CcHHHHHHHHhCCC-CCceeeccccc
Confidence 345543 223346789999999999999999999999999999998876654 23567899999996 68999999999
Q ss_pred chHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHH
Q 012522 138 SSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAA 217 (461)
Q Consensus 138 aSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a 217 (461)
+|++.||..|..+|++|.++.+||+|+|.++...
T Consensus 157 a~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~~~---------------------------------------------- 190 (379)
T PLN02326 157 SGFVLGLVTAARFIRGGGYKNVLVIGADALSRYV---------------------------------------------- 190 (379)
T ss_pred hHHHHHHHHHHHHHHcCCCCEEEEEEechhcCCC----------------------------------------------
Confidence 9999999999999999999999999999987610
Q ss_pred HHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccc
Q 012522 218 VESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGA 297 (461)
Q Consensus 218 ~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGA 297 (461)
+ .+ ++ .++..+||||
T Consensus 191 ----------------~------------------------~~-------------------d~------~~~~lfGDGA 205 (379)
T PLN02326 191 ----------------D------------------------WT-------------------DR------GTCILFGDGA 205 (379)
T ss_pred ----------------C------------------------cc-------------------cc------CceEEEccee
Confidence 0 00 00 0111289999
Q ss_pred eEEEEcchhHHHhcCCCeeE-EEEEee---------eecc--------------CC---C-C--C---CC--------cH
Q 012522 298 GAVLLMKRSLAVQKGLPILG-VFRSFS---------AVGV--------------DP---S-V--M---GI--------GP 336 (461)
Q Consensus 298 aAvvL~s~~~A~~~g~~~~a-~i~g~~---------~~~~--------------~p---~-~--~---~~--------~~ 336 (461)
+|+||++.+..+. + ++. .+...+ ..+. .+ . . + +. ..
T Consensus 206 aAvlL~~~~~~~~-~--i~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~ 282 (379)
T PLN02326 206 GAVVLQACDDDED-G--LLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCV 282 (379)
T ss_pred EEEEEEEcCCCCC-c--eEEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHHHHH
Confidence 9999997542211 1 111 111000 0000 00 0 0 0 00 01
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc--CC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR--GK 414 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~--~~ 414 (461)
..+++++|+++|++++|||+|.+|+.+........+.||++++++..+ .--+||...++-. -.+.++.++ .+
T Consensus 283 ~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~--l~~~GNt~sAsi~----~~L~~~~~~g~~~ 356 (379)
T PLN02326 283 PQVIESALQKAGLTAESIDWLLLHQANQRIIDAVAQRLGIPPEKVISN--LANYGNTSAASIP----LALDEAVRSGKVK 356 (379)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHeeec--HhhcCcHHHHHHH----HHHHHHHHcCCCC
Confidence 257889999999999999999999999998888999999999887443 3456776666533 344444332 22
Q ss_pred CCCEEEEEecccCcceeEEEE
Q 012522 415 DCRFGVISMCIGSGMGAAAVF 435 (461)
Q Consensus 415 ~~~~gl~~~~~g~G~g~A~v~ 435 (461)
.+++.++.. .|.|+.++.++
T Consensus 357 ~Gd~vll~~-~G~G~t~~~~l 376 (379)
T PLN02326 357 KGDVIATAG-FGAGLTWGSAI 376 (379)
T ss_pred CCCEEEEEE-EChhheeeEEE
Confidence 344444443 26666544333
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.8e-21 Score=190.59 Aligned_cols=255 Identities=21% Similarity=0.254 Sum_probs=175.4
Q ss_pred eccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCC
Q 012522 58 RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQC 137 (461)
Q Consensus 58 ~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~C 137 (461)
++++.+ +....++.++.+|+.+|+++||+++|+++++||.+++++..++.. .+..+..++..+|++ ..++++++.+|
T Consensus 36 ~~gi~~-r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~-~~~~a~~l~~~lGl~-~~~~~~v~~~C 112 (318)
T TIGR00747 36 RTGIKE-RRIAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHA-FPSAACMVQAYLGIK-GIPAFDLSAAC 112 (318)
T ss_pred ccCceE-EEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CChHHHHHHHHhCCC-CCcEeehhhhh
Confidence 355543 233456889999999999999999999999999999999887764 566778899999995 47899999999
Q ss_pred chHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHH
Q 012522 138 SSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAA 217 (461)
Q Consensus 138 aSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a 217 (461)
+|++.+|..|+++|++|.++++||+|+|.++..
T Consensus 113 ~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~----------------------------------------------- 145 (318)
T TIGR00747 113 AGFIYALSVAKQYIESGKYKTVLVVGAEKLSST----------------------------------------------- 145 (318)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCc-----------------------------------------------
Confidence 999999999999999999999999999998751
Q ss_pred HHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccc
Q 012522 218 VESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGA 297 (461)
Q Consensus 218 ~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGA 297 (461)
++ + .+++ ++..+||||
T Consensus 146 ---------------~~------------------------------------------~-~~~~------~~~~~GDGA 161 (318)
T TIGR00747 146 ---------------LD------------------------------------------W-TDRG------TCVLFGDGA 161 (318)
T ss_pred ---------------CC------------------------------------------c-CCCC------eEEEEecce
Confidence 00 0 0000 011279999
Q ss_pred eEEEEcchhHHHhcCCCeeEEEEEeeee-c---cCC-------CCC------C--------CcHHHHHHHHHHHcCCCCC
Q 012522 298 GAVLLMKRSLAVQKGLPILGVFRSFSAV-G---VDP-------SVM------G--------IGPAVAIPAAVKSAGLQID 352 (461)
Q Consensus 298 aAvvL~s~~~A~~~g~~~~a~i~g~~~~-~---~~p-------~~~------~--------~~~~~ai~~aL~~AGl~~~ 352 (461)
+|+||++.+... .+.......... . ..| ... + .....+++++|+++|++++
T Consensus 162 aA~lL~~~~~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 237 (318)
T TIGR00747 162 GAVVLGESEDPG----GIISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPE 237 (318)
T ss_pred eEEEEeecCCCC----cEEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 999998865321 111111111000 0 000 000 0 0123578899999999999
Q ss_pred CccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCccee-
Q 012522 353 DINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA- 431 (461)
Q Consensus 353 DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~- 431 (461)
|||+|.+|+.+........+.||++++++..+ .--+||..+++-...+.+++.. ++++.+++.+... .|.|...
T Consensus 238 di~~~~~h~~~~~~~~~~~~~lgi~~~k~~~~--~~~~Gn~~sas~~~~L~~~~~~--~~~~~Gd~vll~~-~G~G~t~~ 312 (318)
T TIGR00747 238 DIDWFVPHQANLRIIEALAKRLELDMSQVVKT--VHKYGNTSAASIPLALDELLRT--GRIKPGDLLLLVA-FGGGLTWG 312 (318)
T ss_pred HCCEEEECCCCHHHHHHHHHHcCCCHHHeeeh--HhhhCCHHHHHHHHHHHHHHHc--CCCCCCCEEEEEE-Eehhheee
Confidence 99999999999999999999999999886533 2347777776644444443321 1122344444433 2555444
Q ss_pred EEEE
Q 012522 432 AAVF 435 (461)
Q Consensus 432 A~v~ 435 (461)
+++|
T Consensus 313 ~~~l 316 (318)
T TIGR00747 313 AALV 316 (318)
T ss_pred EEEE
Confidence 4444
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=7e-21 Score=192.86 Aligned_cols=242 Identities=16% Similarity=0.186 Sum_probs=171.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
++++..+|+.+|+++||+++|++++|||.||++++++++. .|..+..++.+||++.++++++++.+|++++++|..|..
T Consensus 56 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~-~P~~a~~v~~~Lg~~~~~~~~di~~~C~g~~~aL~~A~~ 134 (353)
T PRK12880 56 ENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFF-MPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHS 134 (353)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCCCCceEEehhhhhHHHHHHHHHHHH
Confidence 4778999999999999999999999999999999998887 788999999999997678999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|..+ +|+++.|..|..
T Consensus 135 ~i~~~~~~-~LVv~~e~~S~~----------------------------------------------------------- 154 (353)
T PRK12880 135 LIQSGLGK-ILLICGDTLSKF----------------------------------------------------------- 154 (353)
T ss_pred HHHcCCCC-EEEEEehhhhcc-----------------------------------------------------------
Confidence 99999999 999999988761
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
+ ++++ + .+.+ + +||||+|+||+..+...
T Consensus 155 ---~------------------------~~~d--~---------~~~~-------l-------FGDGAaA~vl~~~~~~~ 182 (353)
T PRK12880 155 ---I------------------------HPKN--M---------NLAP-------I-------FGDGVSATLIEKTDFNE 182 (353)
T ss_pred ---C------------------------Cccc--C---------Ccee-------e-------ecccceEEEEEecCCCC
Confidence 0 0000 0 0011 2 79999999998543211
Q ss_pred hcCCCeeEEEEEeeee--------c-c-CC-------------C--------CC-CCc--------HHHHHHHHHHHcCC
Q 012522 310 QKGLPILGVFRSFSAV--------G-V-DP-------------S--------VM-GIG--------PAVAIPAAVKSAGL 349 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~--------~-~-~p-------------~--------~~-~~~--------~~~ai~~aL~~AGl 349 (461)
+ .. .+...+.. + . .| . .+ +.. ...+++++|+++|+
T Consensus 183 --~--~~-~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl 257 (353)
T PRK12880 183 --A--FF-ELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKV 257 (353)
T ss_pred --c--eE-EEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1 10 11110000 0 0 00 0 00 111 13588999999999
Q ss_pred CCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcc
Q 012522 350 QIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGM 429 (461)
Q Consensus 350 ~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~ 429 (461)
+++|||+|.+|+++..+.....+.||++++++.. .+-.-+|.++...+..++.++.... +.+ .+... .|+|+
T Consensus 258 ~~~did~~v~HQ~~~~i~~~i~~~Lgl~~ek~~~-----~~l~~~GNtssasip~~L~~~~~~~-~~~-~ll~~-~G~G~ 329 (353)
T PRK12880 258 DEKDIAFHLFHQSNAYLVDCIKEELKLNDDKVPN-----FIMEKYANLSACSLPALLCELDTPK-EFK-ASLSA-FGAGL 329 (353)
T ss_pred CHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhh-----hhHHhhCCHHHHHHHHHHHHHHHcC-CcE-EEEEE-Echhh
Confidence 9999999999999999999999999999988621 1123344455555556665555430 233 33333 36666
Q ss_pred eeE-EEEEE
Q 012522 430 GAA-AVFER 437 (461)
Q Consensus 430 g~A-~v~~~ 437 (461)
.++ ++++-
T Consensus 330 s~g~~ll~~ 338 (353)
T PRK12880 330 SWGSAVLNF 338 (353)
T ss_pred hheEeEEEE
Confidence 654 44444
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-20 Score=188.54 Aligned_cols=243 Identities=19% Similarity=0.230 Sum_probs=172.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
+++++.+|+.+|+++||+++|+++++||.+++++++++.. .+..+..++..+|++ ..++++++.+|+|++.||..|.+
T Consensus 49 ~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~-~~~~a~~l~~~lg~~-~~~~~~v~~~C~~~~~al~~A~~ 126 (325)
T PRK12879 49 VEEYTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYL-FPSTASQVQARLGIP-NAAAFDINAACAGFLYGLETANG 126 (325)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHhCCC-CCcEEEECccchHHHHHHHHHHH
Confidence 5778999999999999999999999999999999877665 577888899999995 47899999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++.+|++++|.++...
T Consensus 127 ~l~~g~~~~~Lvv~~e~~s~~~---------------------------------------------------------- 148 (325)
T PRK12879 127 LITSGLYKKVLVIGAERLSKVT---------------------------------------------------------- 148 (325)
T ss_pred HHHcCCCCEEEEEEehhhcCcC----------------------------------------------------------
Confidence 9999999999999999987610
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
. .+ ++ .+...+||||+|+||.+.+...
T Consensus 149 ----~------------------------~~-------------------~~------~~~~~~GDgAaA~ll~~~~~~~ 175 (325)
T PRK12879 149 ----D------------------------YT-------------------DR------TTCILFGDGAGAVVLEATENEP 175 (325)
T ss_pred ----C------------------------cc-------------------cc------CceEEEeecceEEEEEecCCCC
Confidence 0 00 00 0011279999999999765311
Q ss_pred hcCCCeeEEEEE-------------eeeeccCCC---------CCCC--------cHHHHHHHHHHHcCCCCCCccEEEe
Q 012522 310 QKGLPILGVFRS-------------FSAVGVDPS---------VMGI--------GPAVAIPAAVKSAGLQIDDINLFEI 359 (461)
Q Consensus 310 ~~g~~~~a~i~g-------------~~~~~~~p~---------~~~~--------~~~~ai~~aL~~AGl~~~DID~~ei 359 (461)
+ .+..... .+.. .++. ..+. ....+++++|+++|++++|||+|.+
T Consensus 176 --~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~did~~~~ 250 (325)
T PRK12879 176 --G--FIDYVLGTDGDGGDILYRTGLGTT-MDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTKDDIDWVIP 250 (325)
T ss_pred --C--eEEEEEEEcCCCCCeEEEcCCCCC-CCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 1 1111111 1100 0000 0000 1235788999999999999999999
Q ss_pred cCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccC-CCCCEEEEEecccCccee-EEEEE
Q 012522 360 NEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRG-KDCRFGVISMCIGSGMGA-AAVFE 436 (461)
Q Consensus 360 heafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~-~~~~~gl~~~~~g~G~g~-A~v~~ 436 (461)
|+.+........+.||++.+++..+ ..-+||...++-...+.+++.+ ++. +|.++.++++ |.|..+ +++|+
T Consensus 251 h~~~~~~~~~~~~~lg~~~~~~~~~--~~~~Gn~~sas~~~~L~~~~~~--g~~~~Gd~vll~~~--G~G~~~~~~l~~ 323 (325)
T PRK12879 251 HQANLRIIESLCEKLGIPMEKTLVS--VEYYGNTSAATIPLALDLALEQ--GKIKPGDTLLLYGF--GAGLTWAALLVK 323 (325)
T ss_pred CCCCHHHHHHHHHHcCCCHHHhhhh--HhhhCchHHHHHHHHHHHHHHc--CCCCCCCEEEEEEE--chhhhhEEEEEE
Confidence 9999998889999999998876542 3557887777655444444322 112 3444444443 555554 44443
|
|
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-20 Score=189.10 Aligned_cols=243 Identities=19% Similarity=0.255 Sum_probs=173.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
++.++.+|+.+|+++||+++|++++|||.+++++++++.. .+..+.+++..+|++...++++++.+|++++.+|..|..
T Consensus 47 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~-~p~~a~~v~~~Lgl~~~~~~~dv~~~C~~~~~aL~~A~~ 125 (347)
T PRK04262 47 PDEDTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYA-VKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMG 125 (347)
T ss_pred CCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcc-cccHHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998877755 556677888999996557889999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++.+||++.|.....+
T Consensus 126 ~i~sg~~~~aLVv~~e~~~~~~---------------------------------------------------------- 147 (347)
T PRK04262 126 LVKSGMIKYALAIGADTAQGAP---------------------------------------------------------- 147 (347)
T ss_pred HHHcCCCCEEEEEEEeeeccCC----------------------------------------------------------
Confidence 9999999999999999732100
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
++ . +. .. +||||+|+||...+..
T Consensus 148 ------------------------------~~---------------~-~~---~~-------~GDGA~A~ll~~~~~~- 170 (347)
T PRK04262 148 ------------------------------GD---------------A-LE---YT-------AAAGGAAFIIGKEEVI- 170 (347)
T ss_pred ------------------------------CC---------------C-CC---Cc-------CCCCcEEEEEecCccc-
Confidence 00 0 00 01 5999999999864321
Q ss_pred hcCCCeeEEEEEeeeec-----------c-CCC---CC-C-----CcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHH
Q 012522 310 QKGLPILGVFRSFSAVG-----------V-DPS---VM-G-----IGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYV 368 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~~-----------~-~p~---~~-~-----~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~ 368 (461)
.++.+..... . .+. .+ . .....+++++|+++|++++|||+|.+|+++..+..
T Consensus 171 -------~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~ 243 (347)
T PRK04262 171 -------AEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAVFHQPNGKFPL 243 (347)
T ss_pred -------ceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceeecCCCchHHHH
Confidence 1222111000 0 010 00 0 12346889999999999999999999999999999
Q ss_pred HHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCccee-EEEEEEccc
Q 012522 369 YCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA-AAVFERGDC 440 (461)
Q Consensus 369 ~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~-A~v~~~~~~ 440 (461)
...+.||++++++..+--.--+||..+++-...+.+++..++ ++.++.++++ |.|..+ +++++..+.
T Consensus 244 ~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~~~~---~Gd~vll~~~--G~G~~~~~~~~~~~~~ 311 (347)
T PRK04262 244 RVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLDVAK---PGDRILVVSF--GSGAGSDAFSITVTDA 311 (347)
T ss_pred HHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHHhCC---CCCEEEEEec--CCCcceeeEEEEechh
Confidence 999999999988643211245788888876666666554332 2444444443 555544 566665443
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-20 Score=193.28 Aligned_cols=243 Identities=19% Similarity=0.190 Sum_probs=164.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHH
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIK 152 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~ 152 (461)
+..+|+.+|+++||+++|+++++||.+++++.+++.. .+..+..++..+|+ ..++++++.+|+|++.+|..|+++|+
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~-~p~~a~~v~~~Lgl--~~~~~~v~~aCasg~~al~~A~~~i~ 170 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRA-YPAMAIEIQQALGI--EGFAFDMNVACSSATFGIQTAANAIR 170 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CcHHHHHHHHhcCC--CCcEEEecchhHHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999998876654 45567788899999 47899999999999999999999999
Q ss_pred cCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 012522 153 AGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGK 232 (461)
Q Consensus 153 sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~ 232 (461)
+|.++++||+|+|.++...-
T Consensus 171 ~g~~~~vLvv~~e~~s~~~~------------------------------------------------------------ 190 (372)
T PRK07515 171 SGSARRVLVVNPEICSGHLN------------------------------------------------------------ 190 (372)
T ss_pred cCCCCEEEEEeeeccccccc------------------------------------------------------------
Confidence 99999999999999876100
Q ss_pred CccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-CCccccCCCCcccccceEEEEcchhHHHhc
Q 012522 233 FKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQK 311 (461)
Q Consensus 233 ~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~ 311 (461)
| -++ .+++ +||||+|+||++.+.+...
T Consensus 191 ~---------------------------------------------~d~~~~~l-------fGDgAaA~vL~~~~~~~~~ 218 (372)
T PRK07515 191 F---------------------------------------------RDRDSHFI-------FGDVATAVIVERADTATSA 218 (372)
T ss_pred c---------------------------------------------cCCCCCEE-------ecCccEEEEEeeccccccC
Confidence 0 000 1234 7999999999986644221
Q ss_pred -CCCeeEEEEEeee-------ec----cCCCC----------CCCc--------HHHHHHHHHHHcCCCCCCccEEEecC
Q 012522 312 -GLPILGVFRSFSA-------VG----VDPSV----------MGIG--------PAVAIPAAVKSAGLQIDDINLFEINE 361 (461)
Q Consensus 312 -g~~~~a~i~g~~~-------~~----~~p~~----------~~~~--------~~~ai~~aL~~AGl~~~DID~~eihe 361 (461)
+..++........ .+ .++.. .+.. ...+++++|+++|++++|||+|.+|+
T Consensus 219 ~~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq 298 (372)
T PRK07515 219 GGFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRFWLHQ 298 (372)
T ss_pred CCceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECC
Confidence 1233332211100 00 01100 1111 35789999999999999999999999
Q ss_pred CChHHHHHHHHH-cCCC--CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCccee-EEEEEE
Q 012522 362 AFASQYVYCIKK-LGLD--PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA-AAVFER 437 (461)
Q Consensus 362 afa~~~~~~~e~-LGl~--~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~-A~v~~~ 437 (461)
.+........+. ||+. .++...+ .--+||...++-...+. +++++.+.++++++... |.|+.+ +++|++
T Consensus 299 ~~~~~~d~~~~~llg~~~~~~~~~~~--~~~~GNt~sasi~~~L~----~~~~~~~~Gd~vll~~~-G~G~~~~~~ll~~ 371 (372)
T PRK07515 299 ANINMNQLIGKKVLGRDATPEEAPVI--LDEYANTSSAGSIIAFH----KHSDDLAAGDLGVICSF-GAGYSIGSVIVRK 371 (372)
T ss_pred CCHHHHHHHHHHhccCCCChhhceEe--HHhcCCchhhHHHHHHH----HHhccCCCCCEEEEEEe-cccHHHHHHHhcc
Confidence 999887777777 5654 3332211 24567777666544443 33333223445444443 555443 455543
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-20 Score=188.66 Aligned_cols=218 Identities=23% Similarity=0.245 Sum_probs=162.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
++.++.+|+.+|+++||+++|+++++||.+++++.+++.. .+..+..++..+|++ ..++++++.+|+|++.+|..|.+
T Consensus 46 ~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~-~~~~~~~l~~~lg~~-~~~~~~v~~~C~s~~~al~~A~~ 123 (320)
T cd00830 46 PGETTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYL-FPATACLVQARLGAK-NAAAFDINAACSGFLYGLSTAAG 123 (320)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCcEeeccccchHHHHHHHHHHH
Confidence 4688999999999999999999999999999999887764 466788899999996 78999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++++|++++|.++....
T Consensus 124 ~i~~g~~~~vLvv~~e~~s~~~~--------------------------------------------------------- 146 (320)
T cd00830 124 LIRSGGAKNVLVVGAETLSRILD--------------------------------------------------------- 146 (320)
T ss_pred HHHcCCCCEEEEEEehhhccccC---------------------------------------------------------
Confidence 99999999999999999876100
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
|++ + + .+.+ +||||+|+||++.+.
T Consensus 147 ---~~~-----------------------------------------~-~--~~~~-------~GDgAaA~ll~~~~~-- 170 (320)
T cd00830 147 ---WTD-----------------------------------------R-S--TAVL-------FGDGAGAVVLEATEE-- 170 (320)
T ss_pred ---ccc-----------------------------------------C-C--ceEE-------EeccceEEEEEecCC--
Confidence 000 0 0 1123 799999999998653
Q ss_pred hcCCCeeEEEEEeeeec-----cC------C--------C---CCC--------CcHHHHHHHHHHHcCCCCCCccEEEe
Q 012522 310 QKGLPILGVFRSFSAVG-----VD------P--------S---VMG--------IGPAVAIPAAVKSAGLQIDDINLFEI 359 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~~-----~~------p--------~---~~~--------~~~~~ai~~aL~~AGl~~~DID~~ei 359 (461)
+..++.......... .+ | . ..+ .....+++++|+++|++++|||+|.+
T Consensus 171 --~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~~~ 248 (320)
T cd00830 171 --DPGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTPDDIDWFVP 248 (320)
T ss_pred --CCcEEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCHHHCCEEEE
Confidence 112221111110000 00 0 0 000 11246889999999999999999999
Q ss_pred cCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHH
Q 012522 360 NEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLL 406 (461)
Q Consensus 360 heafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~ 406 (461)
|+.+........+.||++++++..+ .--+||..+++-...+.+++
T Consensus 249 h~~~~~~~~~~~~~lgl~~~~~~~~--~~~~Gn~~sas~~~~L~~~~ 293 (320)
T cd00830 249 HQANLRIIEAVAKRLGLPEEKVVVN--LDRYGNTSAASIPLALDEAI 293 (320)
T ss_pred CCCCHHHHHHHHHHhCCCHHHhhhh--HHhhCcHHHHHHHHHHHHHH
Confidence 9999999999999999998886432 23478877776544444443
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.1e-20 Score=183.15 Aligned_cols=242 Identities=19% Similarity=0.200 Sum_probs=166.9
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
+++++.+|+.+|+++||+++|+++++||.|+++++++++. .|..+.+++.+||++ +.++++++.+|+++++||..|..
T Consensus 48 ~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~-~p~~a~~v~~~Lg~~-~~~~~di~~~C~g~~~aL~~A~~ 125 (326)
T PRK05963 48 PDETLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHL-LPPSAPLLAHRLGLQ-NSGAIDLAGACAGFLYALVLADG 125 (326)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CCcHHHHHHHHhCCC-CCceeeccchhhHHHHHHHHHHH
Confidence 4788999999999999999999999999999999988766 677888999999996 57899999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|. +.+||+++|.++..
T Consensus 126 ~l~~~~-~~aLVv~~d~~s~~----------------------------------------------------------- 145 (326)
T PRK05963 126 FVRAQG-KPVLVVAANILSRR----------------------------------------------------------- 145 (326)
T ss_pred HHHcCC-CeEEEEEechhhcc-----------------------------------------------------------
Confidence 999985 89999999987651
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
+ ++++ + ....+ +||||+|+||...+...
T Consensus 146 ---~------------------------~~~~---------------~---~~~~l-------fGDgA~A~ll~~~~~~~ 173 (326)
T PRK05963 146 ---I------------------------NMAE---------------R---ASAVL-------FADAAGAVVLAPSAKAN 173 (326)
T ss_pred ---C------------------------Cccc---------------c---CceEE-------EeecceEEEEEecCCCC
Confidence 0 0000 0 00113 79999999998654211
Q ss_pred hcCCCeeE-EEEEeee---------ec-cCC--------C-CC----CC--------cHHHHHHHHHHHcCCCCCCccEE
Q 012522 310 QKGLPILG-VFRSFSA---------VG-VDP--------S-VM----GI--------GPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 310 ~~g~~~~a-~i~g~~~---------~~-~~p--------~-~~----~~--------~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
.+ ++. .+...+. .+ ..| . .+ +. ....+++++|+++|++++|||+|
T Consensus 174 -~~--~l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~ 250 (326)
T PRK05963 174 -SG--VLGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAAMTPQDIDRF 250 (326)
T ss_pred -Cc--eEEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 11 111 1110000 00 001 0 00 00 12357889999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc--CCCCCEEEEEecccCccee-EEE
Q 012522 358 EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR--GKDCRFGVISMCIGSGMGA-AAV 434 (461)
Q Consensus 358 eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~--~~~~~~gl~~~~~g~G~g~-A~v 434 (461)
.+|+.+........+.||++++++..+ .--+||..+++ +...+.++..+ .+.+++.++... |.|+.+ +++
T Consensus 251 ~~h~~~~~~~~~~~~~l~l~~~k~~~~--l~~~Gn~~sas----~~~~L~~~~~~~~~~~Gd~vll~~~-G~G~~~~~~l 323 (326)
T PRK05963 251 FPHQANARIVDKVCETIGIPRAKAAST--LETYGNSSAAT----IPLSLSLANLEQPLREGERLLFAAA-GAGMTGGAVV 323 (326)
T ss_pred EeCCCCHHHHHHHHHHcCCCHHHhhhh--HHhhCcHHHHH----HHHHHHHHHHhCCCCCCCEEEEEEE-ehhhhheeeE
Confidence 999999999999999999999886422 24466765444 33344444322 223344444332 555543 444
Q ss_pred E
Q 012522 435 F 435 (461)
Q Consensus 435 ~ 435 (461)
|
T Consensus 324 l 324 (326)
T PRK05963 324 M 324 (326)
T ss_pred E
Confidence 4
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.6e-20 Score=184.86 Aligned_cols=110 Identities=12% Similarity=0.212 Sum_probs=99.4
Q ss_pred EEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeE
Q 012522 52 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR 131 (461)
Q Consensus 52 ~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~ 131 (461)
.-+|+.+++|.. ++.++.+|+.+|++++|+++|+++++||.|++++..+... .+..+.+++..+|++ .++.+
T Consensus 32 ~~~gi~~r~~~~------~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~-~~~~~~~i~~~lg~~-~~~~~ 103 (324)
T cd00827 32 YTTGIGQRHMAG------DDEDVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDK-GKSAATYLAELLGLT-NAEAF 103 (324)
T ss_pred eeeecceeEecC------CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CccHHHHHHHHcCCC-CCcee
Confidence 347888888864 3788999999999999999999999999999999877665 567888999999996 78999
Q ss_pred EeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccc
Q 012522 132 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 132 ~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~ 169 (461)
+++.+|+|++.||..|+++|++|.++.+||+++|.++.
T Consensus 104 ~v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~ 141 (324)
T cd00827 104 DLKQACYGGTAALQLAANLVESGPWRYALVVASDIASY 141 (324)
T ss_pred ehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhh
Confidence 99999999999999999999999999999999999887
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=217.71 Aligned_cols=265 Identities=17% Similarity=0.189 Sum_probs=196.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC------------------------------------------
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS------------------------------------------ 109 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~------------------------------------------ 109 (461)
.|+.+++++||+|+|+.++ .+ +|++|...+...
T Consensus 95 rl~L~~a~eALedAG~~~~-~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (2582)
T TIGR02813 95 LLSLVVAKEVLNDAGLPDG-YDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHWE 173 (2582)
T ss_pred HHHHHHHHHHHHhCCCCCC-CCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhhhhhcccccccC
Confidence 4788999999999999643 33 577776432100
Q ss_pred ----c---cchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhh
Q 012522 110 ----T---RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKV 182 (461)
Q Consensus 110 ----~---~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~ 182 (461)
. ....+..++..+|+ ++|+++|+++|+|++.||..|++.|++|++|++|++|++.... |+
T Consensus 174 ~~~~~g~~~n~~A~RIS~~f~L--~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~-p~---------- 240 (2582)
T TIGR02813 174 ENSFPGSLGNVISGRIANRFDL--GGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNS-PF---------- 240 (2582)
T ss_pred ccccccccccHHHHHHHHHhCC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCC-HH----------
Confidence 0 01256778889999 7999999999999999999999999999999999999987543 10
Q ss_pred hhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCC
Q 012522 183 EIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDG 262 (461)
Q Consensus 183 ~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~ 262 (461)
..+++ .+ . ..+++|+.
T Consensus 241 ----------~~~~f------------------------s~------~------------------------~~lS~~g~ 256 (2582)
T TIGR02813 241 ----------MYMSF------------------------SK------T------------------------PAFTTNED 256 (2582)
T ss_pred ----------HHHHH------------------------Hh------c------------------------cCcCCCCC
Confidence 00000 00 0 02333333
Q ss_pred CCCCCCHHHHhccCCCCCC--CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCC--CC---CCCc
Q 012522 263 IRPNTTIADLAKLKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP--SV---MGIG 335 (461)
Q Consensus 263 ~r~~~t~e~l~~~~pvf~~--~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p--~~---~~~~ 335 (461)
+|| ||. ||++ +|||++++||.+.+.|.+.|.++++.|.|++.+.... .. ...+
T Consensus 257 ------------crp-FD~~adG~v-------~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~g 316 (2582)
T TIGR02813 257 ------------IQP-FDIDSKGMM-------IGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEG 316 (2582)
T ss_pred ------------ccC-CCCCCCccc-------ccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHH
Confidence 455 876 8998 8999999999999999999999999999999876432 11 1234
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCChH----HHHHHH-HHcCCC---CCCcCCCCCcccccCchhhHHHHHHHHHHH
Q 012522 336 PAVAIPAAVKSAGLQIDDINLFEINEAFAS----QYVYCI-KKLGLD---PEKVNVNGGAVALGHPLGATGARCVATLLS 407 (461)
Q Consensus 336 ~~~ai~~aL~~AGl~~~DID~~eiheafa~----~~~~~~-e~LGl~---~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~ 407 (461)
...+++++|+++|++++||||+|.|-.-+. .++..+ +.++-. ..++.++.-+..+||..+|+|+..++.++.
T Consensus 317 q~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~l 396 (2582)
T TIGR02813 317 QAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVL 396 (2582)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHH
Confidence 578999999999999999999999976542 333333 233322 134555566678999999999999999999
Q ss_pred HHHcc-CC----------------------------------CCCEEEEEecccCcceeEEEEEEc
Q 012522 408 EMKRR-GK----------------------------------DCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 408 ~L~~~-~~----------------------------------~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
.|+.+ +| ..|++.+++++-||.+.++||++.
T Consensus 397 al~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 397 ALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred HHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence 99976 00 136788888877888999999975
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=9e-19 Score=176.93 Aligned_cols=98 Identities=8% Similarity=-0.010 Sum_probs=85.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEee-cCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTV-LAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVA 148 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~-~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~ 148 (461)
++++..+|+.+|++++|+++|++|++||.+++.++ .++.. .+..+.+++..+|++ ..++++++.+|++++.+|..|.
T Consensus 49 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~-~p~~a~~l~~~lGl~-~~~~~~v~~~C~~~~~al~~A~ 126 (339)
T PRK06840 49 PEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYP-VWSSAPKIQHEIGAK-NAWAFDIMAVCASFPIALKVAK 126 (339)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCC-CCchHHHHHHHhCCC-CcccccccccchHHHHHHHHHH
Confidence 46889999999999999999999999999986543 44443 455678899999995 5789999999999999999999
Q ss_pred HHHHc-CCCCEEEEEeeccccc
Q 012522 149 TAIKA-GLYDIGIAAGLESMTV 169 (461)
Q Consensus 149 ~~I~s-G~~d~vLv~G~E~~s~ 169 (461)
++|++ |.++.+||++.|..+.
T Consensus 127 ~~l~~~g~~~~~Lvv~~~~~s~ 148 (339)
T PRK06840 127 DLLYSDPSIENVLLVGGYRNSD 148 (339)
T ss_pred HHHhcCCCccEEEEEeeccccc
Confidence 99999 9999999999998765
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.3e-19 Score=181.60 Aligned_cols=246 Identities=18% Similarity=0.172 Sum_probs=167.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeC-CCCchHHHHHHHHHHHH
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATAI 151 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~CaSgl~Al~~A~~~I 151 (461)
++.+|+.+|+++||+++|+++++||.|+++++++ .. .|..+..++..+|++..+++++++ .+|++++.||..|..+|
T Consensus 84 ~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~-~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~ 161 (361)
T cd00831 84 EARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NP-TPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLL 161 (361)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CC-CCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHHH
Confidence 6899999999999999999999999999998775 33 577888999999996568899998 89999999999999999
Q ss_pred HcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCC
Q 012522 152 KAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231 (461)
Q Consensus 152 ~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag 231 (461)
++|..+.+||+++|.+|..
T Consensus 162 ~~~~~~~aLvv~~e~~s~~------------------------------------------------------------- 180 (361)
T cd00831 162 EANPGARVLVVSTELCSLW------------------------------------------------------------- 180 (361)
T ss_pred HHCCCCEEEEEEeecccce-------------------------------------------------------------
Confidence 9999999999999998761
Q ss_pred CCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhc
Q 012522 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQK 311 (461)
Q Consensus 232 ~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~ 311 (461)
|+. ++ +.+.+ + ..+.+||||+|+||++.+.....
T Consensus 181 -~~~------------------------~d------~~~~~------~---------~~~lfGDgaaA~ll~~~~~~~~~ 214 (361)
T cd00831 181 -YRG------------------------PD------HRSML------V---------GNALFGDGAAAVLLSNDPRDRRR 214 (361)
T ss_pred -eCC------------------------CC------cHHHh------h---------hhhhccCCceEEEEEcCCCcccc
Confidence 100 00 00000 0 11127999999999986543210
Q ss_pred CCCeeEEEEEeeee---------cc--CCC----CCC--------CcHHHHHHHHHHHc--CCCCCCccEEEecCCChHH
Q 012522 312 GLPILGVFRSFSAV---------GV--DPS----VMG--------IGPAVAIPAAVKSA--GLQIDDINLFEINEAFASQ 366 (461)
Q Consensus 312 g~~~~a~i~g~~~~---------~~--~p~----~~~--------~~~~~ai~~aL~~A--Gl~~~DID~~eiheafa~~ 366 (461)
..+...+.+.... .. .+. .+. .....+++++|+++ |++++|||+|.+|+.+...
T Consensus 215 -~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~~~i 293 (361)
T cd00831 215 -ERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGRAV 293 (361)
T ss_pred -cccceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCccccceEEEECCCChHH
Confidence 0010111111000 00 000 000 12346788999999 9999999999999999988
Q ss_pred HHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccC-CCCCEEEEEecccCcceeE
Q 012522 367 YVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRG-KDCRFGVISMCIGSGMGAA 432 (461)
Q Consensus 367 ~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~-~~~~~gl~~~~~g~G~g~A 432 (461)
.....+.||++++++..+ --.--+||..+++-...+.+++.+ ++. ++.++.++++ |.|..+.
T Consensus 294 ~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~--g~~~~Gd~vll~~~--G~G~s~~ 357 (361)
T cd00831 294 LDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAK--GRVKRGDRGLLIAF--GPGFTCE 357 (361)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHh--CCCCCCCEEEEEEE--cCCceee
Confidence 888999999999886310 002346777777644444444332 112 2444444443 5555543
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-19 Score=186.01 Aligned_cols=248 Identities=19% Similarity=0.195 Sum_probs=164.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC-CeEEeCCCCchHHHHHHHHHH
Q 012522 71 DTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV-PLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 71 ~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~-~~~~v~~~CaSgl~Al~~A~~ 149 (461)
+++..+|+.+|+++||+++|++++|||.||+++++ ++. .|..+..++..||++..+ .+++++.+|++++++|.+|..
T Consensus 103 ~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~-~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~ 180 (391)
T PLN03169 103 NEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EAR-LPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKD 180 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCC-CCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHH
Confidence 45678999999999999999999999999998874 544 577888999999996544 479999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|..+.|||+++|..|..
T Consensus 181 ~~~~~~~~~vLvv~~e~~s~~----------------------------------------------------------- 201 (391)
T PLN03169 181 IAENNPGSRVLLTTSETTILG----------------------------------------------------------- 201 (391)
T ss_pred HHHhCCCCeEEEEEEEcChhh-----------------------------------------------------------
Confidence 999999999999999997651
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
|+. + +.+ ..++ ...++.+||||+|+||...+...
T Consensus 202 ---~~~-----------~----------~~~-------~~~d---------------~~~~~lFGDGAaA~vl~~~~~~~ 235 (391)
T PLN03169 202 ---FRP-----------P----------SPD-------RPYD---------------LVGAALFGDGAAAVIIGADPIPV 235 (391)
T ss_pred ---ccC-----------C----------Ccc-------chhh---------------hhhhhhccCceEEEEEecCCCcc
Confidence 000 0 000 0000 01122379999999998754220
Q ss_pred hcCCCeeEEEEEeeee---ccC--------CC----CCCC--------cHHHHHHHHHHHcCCCCCCcc--EEEecCCCh
Q 012522 310 QKGLPILGVFRSFSAV---GVD--------PS----VMGI--------GPAVAIPAAVKSAGLQIDDIN--LFEINEAFA 364 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~---~~~--------p~----~~~~--------~~~~ai~~aL~~AGl~~~DID--~~eiheafa 364 (461)
. ..+.-.+...... +.+ +. ..+. .....++++|+++|++++||| +|.+|+++.
T Consensus 236 ~--~~~~~~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~ 313 (391)
T PLN03169 236 S--ESPFFELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGP 313 (391)
T ss_pred c--CCcceEEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCH
Confidence 0 0111111111110 000 00 0011 123567899999999999999 999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHcc--CC---CCCEEEEEecccCcceeE
Q 012522 365 SQYVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRR--GK---DCRFGVISMCIGSGMGAA 432 (461)
Q Consensus 365 ~~~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~--~~---~~~~gl~~~~~g~G~g~A 432 (461)
.+.....+.||++++++..+ --.--+||...+| +.-++.+++++ .+ +++.++... .|.|+.+.
T Consensus 314 ~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSas----ip~~L~~~~~~~~~~~~~~gd~~ll~a-fG~G~s~~ 382 (391)
T PLN03169 314 AILNRLEKKLKLAPEKLECSRRALMDYGNVSSNT----IVYVLEYMREELKKKGEEDEEWGLILA-FGPGITFE 382 (391)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhH----HHHHHHHHHHhhcccCCCCCcEEEEEE-EcccHhHH
Confidence 88889999999999886321 0012356655554 44444444432 11 345555544 35565543
|
|
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.9e-18 Score=177.75 Aligned_cols=217 Identities=21% Similarity=0.319 Sum_probs=157.5
Q ss_pred hHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccC
Q 012522 113 MECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCL 192 (461)
Q Consensus 113 ~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~ 192 (461)
.++.+++..+|+ +.|.++++.+|+|++.||..|+++|++|++|++||+|+|..+....
T Consensus 138 ~~a~~ia~~lgl--~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~-------------------- 195 (392)
T PRK09185 138 SLADFLRAYLGL--SGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTL-------------------- 195 (392)
T ss_pred HHHHHHHHHhCC--CCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHH--------------------
Confidence 366788999999 5799999999999999999999999999999999999997543100
Q ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHH
Q 012522 193 LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL 272 (461)
Q Consensus 193 ~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l 272 (461)
..+.+ . +. ++ +
T Consensus 196 --------------------------~~~~~-~-----~~------------------------l~-~------------ 206 (392)
T PRK09185 196 --------------------------NGFNS-L-----ES------------------------LS-P------------ 206 (392)
T ss_pred --------------------------HHHHh-c-----cc------------------------cC-C------------
Confidence 00000 0 00 00 0
Q ss_pred hccCCCCCC--CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHH
Q 012522 273 AKLKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVK 345 (461)
Q Consensus 273 ~~~~pvf~~--~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~ 345 (461)
..++| |+. +|++ ++||++++||++++ +. .++|.|++.... .|...+.+...+++++|+
T Consensus 207 ~~~~P-fd~~~~G~~-------~gEGaa~vVLe~~~-----~~--~~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~ 271 (392)
T PRK09185 207 QPCRP-FSANRDGIN-------IGEAAAFFLLERED-----DA--AVALLGVGESSDAHHMSAPHPEGLGAILAMQQALA 271 (392)
T ss_pred CccCC-CcCCCCccc-------eeceEEEEEEEEcC-----CC--cEEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 02345 554 5766 89999999999872 11 247788776542 223334456789999999
Q ss_pred HcCCCCCCccEEEecCCChH----HHHHHHHH-cCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC-----
Q 012522 346 SAGLQIDDINLFEINEAFAS----QYVYCIKK-LGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK----- 414 (461)
Q Consensus 346 ~AGl~~~DID~~eiheafa~----~~~~~~e~-LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~----- 414 (461)
++|++++|||+++.|...+. .+...++. +|- ..||+.. +..+||+.+|+|+.+++.++++|+++ +|
T Consensus 272 ~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~-~~pv~s~--K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~ 348 (392)
T PRK09185 272 DAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGD-GVPCSST--KGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNT 348 (392)
T ss_pred HcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCC-CCceeCC--CcccccChhhcchHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999988774 44444433 332 2344444 45579999999999999999999977 11
Q ss_pred -------------------CCCEEEEEecccCcceeEEEEEEc
Q 012522 415 -------------------DCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 415 -------------------~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
..++.+++..+.||.+.+++|++.
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~~ 391 (392)
T PRK09185 349 GQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGRA 391 (392)
T ss_pred CCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEeC
Confidence 247888988888899999999875
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.5e-19 Score=180.24 Aligned_cols=252 Identities=19% Similarity=0.160 Sum_probs=167.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC-CeEEeCCCCchHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV-PLRTVNRQCSSGLQAVADVATA 150 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~-~~~~v~~~CaSgl~Al~~A~~~ 150 (461)
++..+|+.+|+++||+++|++++|||.||++++++... |..+.+++..||++... ..+.+..+|++++++|.+|.++
T Consensus 106 ~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~--P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~l 183 (399)
T PLN03171 106 DAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHI--PGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDL 183 (399)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC--CchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHH
Confidence 36889999999999999999999999999999998764 77888999999996443 2567777999999999999999
Q ss_pred HHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhC
Q 012522 151 IKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATAS 230 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~a 230 (461)
|++|..+.|||+++|.+|..
T Consensus 184 i~~~~~~~vLVv~~e~~s~~------------------------------------------------------------ 203 (399)
T PLN03171 184 AENNRGARVLVVAAEITLLL------------------------------------------------------------ 203 (399)
T ss_pred HHhCCCCeEEEEEEeccccc------------------------------------------------------------
Confidence 99999999999999998871
Q ss_pred CCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHh
Q 012522 231 GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 231 g~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
|+. .|+ .+.+.+ .+.+.+||||+|+||+..+...+
T Consensus 204 --~~~-----------------------~d~-----~~~~~~---------------v~~~LFGDGAaA~vl~~~~~~~~ 238 (399)
T PLN03171 204 --FNG-----------------------PDE-----GCFQTL---------------LNQGLFGDGAAAVIVGADADAAE 238 (399)
T ss_pred --cCC-----------------------CCc-----ccHHhh---------------hccccccCccEEEEEecCCCCCC
Confidence 100 000 001111 12223899999999997543211
Q ss_pred cCCCeeEEEEEeeeeccCCC----------------CCC-CcHH----HHHHHHHHH---------cCCCCCCccEEEec
Q 012522 311 KGLPILGVFRSFSAVGVDPS----------------VMG-IGPA----VAIPAAVKS---------AGLQIDDINLFEIN 360 (461)
Q Consensus 311 ~g~~~~a~i~g~~~~~~~p~----------------~~~-~~~~----~ai~~aL~~---------AGl~~~DID~~eih 360 (461)
. +...+....... .|. ... .... ..+++++++ +|++++||+++ +|
T Consensus 239 ~---~~~~l~~~~~~~-~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~-~H 313 (399)
T PLN03171 239 R---PLFEIVSAAQAI-IPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWA-VH 313 (399)
T ss_pred C---CceEEEEeeeEE-ecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEE-Ec
Confidence 1 111222221110 000 001 1112 233565554 58899999988 79
Q ss_pred CCChHHHHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHcc-CCC--CCEEEEEecccCccee-EEEE
Q 012522 361 EAFASQYVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRR-GKD--CRFGVISMCIGSGMGA-AAVF 435 (461)
Q Consensus 361 eafa~~~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~~--~~~gl~~~~~g~G~g~-A~v~ 435 (461)
+.+..+.....+.||++++++..+ --.--+||..++|=...+-+++.+.+.. .+| .+.++... .|.|+.+ +++|
T Consensus 314 q~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~-fG~Glt~~~~ll 392 (399)
T PLN03171 314 PGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMA-FGPGLTVDAMLL 392 (399)
T ss_pred CCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEE-EcccHHHHHHHh
Confidence 999999999999999999886321 0124578888877666666665555321 112 14444443 3666554 3444
Q ss_pred E
Q 012522 436 E 436 (461)
Q Consensus 436 ~ 436 (461)
+
T Consensus 393 ~ 393 (399)
T PLN03171 393 H 393 (399)
T ss_pred h
Confidence 3
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-18 Score=177.36 Aligned_cols=251 Identities=17% Similarity=0.133 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC-CeEEeCCCCchHHHHHHHHHHHHH
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV-PLRTVNRQCSSGLQAVADVATAIK 152 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~-~~~~v~~~CaSgl~Al~~A~~~I~ 152 (461)
..+|+.+|+++||+++|++++|||.||++++++.. .|..+..++..||++..+ .++.++.+|++++.+|..|..+++
T Consensus 102 a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~--~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~ 179 (393)
T PLN03172 102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAE 179 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc--CchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999988754 477889999999996555 357889999999999999999999
Q ss_pred cCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 012522 153 AGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGK 232 (461)
Q Consensus 153 sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~ 232 (461)
+|..+.+||+++|.+|..
T Consensus 180 ~~~~~~vLVV~~E~~S~~-------------------------------------------------------------- 197 (393)
T PLN03172 180 NNAGSRVLVVCSEITAVT-------------------------------------------------------------- 197 (393)
T ss_pred cCCCCeEEEEEEehhhhh--------------------------------------------------------------
Confidence 999999999999998840
Q ss_pred CccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcC
Q 012522 233 FKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKG 312 (461)
Q Consensus 233 ~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g 312 (461)
|. +.+| .+.+.+. .++.+||||+|+||+..+... .
T Consensus 198 ~~-----------------------~~~d-----~~~~~~v---------------~~~LFGDGAaAvVl~~~~~~~-~- 232 (393)
T PLN03172 198 FR-----------------------GPSD-----THLDSLV---------------GQALFGDGAAAVIIGADPDTK-I- 232 (393)
T ss_pred hc-----------------------cccc-----ccHHhhh---------------ccchhcCceEEEEEecCCCCc-c-
Confidence 00 0000 0011110 122379999999998753211 0
Q ss_pred CCeeEEEEEeeee---ccCC------CCCC--------------CcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHH
Q 012522 313 LPILGVFRSFSAV---GVDP------SVMG--------------IGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVY 369 (461)
Q Consensus 313 ~~~~a~i~g~~~~---~~~p------~~~~--------------~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~ 369 (461)
.++.-.+.++... ..+. ...+ ......++++|++.|++..|||+|.+|+....+...
T Consensus 233 ~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqgg~~Il~~ 312 (393)
T PLN03172 233 ERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGGPAILDQ 312 (393)
T ss_pred cCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCccccceEEecCCcHHHHHH
Confidence 1121133333210 0000 0001 112357788999999999999999999999999999
Q ss_pred HHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHc----c--C-CC--CCEEEEEecccCcceeEEEEEEc
Q 012522 370 CIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKR----R--G-KD--CRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 370 ~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~----~--~-~~--~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
..+.||++++++-.+ --+--+||...+| +..++.++++ + . ++ ..++++.. .|.|+.+..++-+.
T Consensus 313 v~~~Lgl~~~~~~~s~~vl~~yGNtSSaS----v~~vL~~~~~~~~~~g~~~~G~~~~~~ll~a-fGpG~t~~~~ll~~ 386 (393)
T PLN03172 313 VEIKLDLKEEKLRATRHVLSDYGNMSSAC----VLFILDEMRKKSIEEGKGSTGEGLEWGVLFG-FGPGLTVETVVLHS 386 (393)
T ss_pred HHHHcCCCHHHHHHHHHHHHHhCccHHhH----HHHHHHHHHhhhhhcCCCCCCCCcceEEEEE-eCCcceeeeeeeEe
Confidence 999999999886432 1123356655555 4445555432 1 1 11 15666655 36666654444443
|
|
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-17 Score=189.71 Aligned_cols=267 Identities=21% Similarity=0.238 Sum_probs=199.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCCcc------------------chHHHHHHHHcCCCCCCCeEEe
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGSTR------------------AMECRMAAFYAGFPETVPLRTV 133 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~~~------------------~~~a~~ia~~lGl~~~~~~~~v 133 (461)
.|+.+.+++||+++|+++..+. +|++|....++... ...+..++..+++ ++|.+.|
T Consensus 93 RllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l--~GPs~~v 170 (1061)
T COG3321 93 RLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGL--SGPSVTV 170 (1061)
T ss_pred hHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcC--CCCCccc
Confidence 4899999999999999998888 68888776665411 1256678889999 7999999
Q ss_pred CCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHH
Q 012522 134 NRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQ 213 (461)
Q Consensus 134 ~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~ 213 (461)
+++|+|++.|+++|++.|++|++|++|++|+..+-.....+.
T Consensus 171 dtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~-------------------------------------- 212 (1061)
T COG3321 171 DTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYL-------------------------------------- 212 (1061)
T ss_pred cchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceee--------------------------------------
Confidence 999999999999999999999999999999987654111000
Q ss_pred HHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCccccCCCC
Q 012522 214 DLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNAS 291 (461)
Q Consensus 214 ~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~lt~~~~~ 291 (461)
|.. .-.+++|..++ + ||. ||++
T Consensus 213 -------------------~~~------------------~g~ls~~g~c~------------~-fd~~adG~v------ 236 (1061)
T COG3321 213 -------------------FSA------------------GGMLSPDGRCK------------A-FDADADGYV------ 236 (1061)
T ss_pred -------------------eec------------------ccCcCCCCcce------------e-cccCCCCEE------
Confidence 000 01244444433 3 775 8998
Q ss_pred cccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCC-----CCCcHHHHHHHHHHHcCCCCCCccEEEecCCChH-
Q 012522 292 QVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSV-----MGIGPAVAIPAAVKSAGLQIDDINLFEINEAFAS- 365 (461)
Q Consensus 292 ~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-----~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~- 365 (461)
.++|++++||.+.+.|.+.|.++++.|.|.+.+...... .+.+....++++|+++|+++++|+|+|.|-.-+.
T Consensus 237 -~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~l 315 (1061)
T COG3321 237 -RGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTGTPL 315 (1061)
T ss_pred -EeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCCCCC
Confidence 899999999999999999999999999999987643221 1234568999999999999999999999975443
Q ss_pred ---HHHHHHH-HcCC--CCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc---------------------------
Q 012522 366 ---QYVYCIK-KLGL--DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR--------------------------- 412 (461)
Q Consensus 366 ---~~~~~~e-~LGl--~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~--------------------------- 412 (461)
.++..+. ..+- ...+.-...-+.++||+..|.|+..++..+.+|+.+
T Consensus 316 GDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~~v~~~ 395 (1061)
T COG3321 316 GDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTE 395 (1061)
T ss_pred cCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCeEeecC
Confidence 1222211 1111 233444444457799999999999999999999977
Q ss_pred -----CC-CCCEEEEEecccCcceeEEEEEEcc
Q 012522 413 -----GK-DCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 413 -----~~-~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
.. ..|++=+++.+-+|-+..+|+|.-.
T Consensus 396 ~~~W~~~~~prrAgvssfG~gGtNaHvIlEe~~ 428 (1061)
T COG3321 396 ATPWPTGGGPRRAGVSSFGFGGTNAHVILEEAP 428 (1061)
T ss_pred CcCCCCCCCCceeeeeccCCCCCceEEEEeecC
Confidence 01 3466666666667778999998654
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.2e-19 Score=179.84 Aligned_cols=250 Identities=16% Similarity=0.139 Sum_probs=167.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC-CeEEeCCCCchHHHHHHHHHHHHH
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV-PLRTVNRQCSSGLQAVADVATAIK 152 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~-~~~~v~~~CaSgl~Al~~A~~~I~ 152 (461)
..+|+.+|+++||+++|++++|||.||+.++++.. .|..+.+++.+||++..+ .+++++.+|++++.+|..|..+++
T Consensus 106 a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~--~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~ 183 (401)
T PLN03170 106 VPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAE 183 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC--CChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHH
Confidence 46799999999999999999999999998887643 477899999999996544 478999999999999999999999
Q ss_pred cCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 012522 153 AGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGK 232 (461)
Q Consensus 153 sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~ 232 (461)
+|....|||+++|.+|..
T Consensus 184 ~~~~~~vLVV~~E~~S~~-------------------------------------------------------------- 201 (401)
T PLN03170 184 NNRGARVLVVCSEITAVT-------------------------------------------------------------- 201 (401)
T ss_pred cCCCCeEEEEEEehhhhc--------------------------------------------------------------
Confidence 999999999999998861
Q ss_pred CccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcC
Q 012522 233 FKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKG 312 (461)
Q Consensus 233 ~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g 312 (461)
|++ | ++ ...+++ ..++.+||||+|+||...+... .
T Consensus 202 ~~~-----------~------------~~-----~~~~~~---------------~~~~LFGDGAaAvVl~~~~~~~-~- 236 (401)
T PLN03170 202 FRG-----------P------------SE-----SHLDSM---------------VGQALFGDGAAAVIVGADPDER-V- 236 (401)
T ss_pred cCC-----------c------------cc-----chhhhh---------------hhhhhhhceeEEEEEecCCccc-c-
Confidence 100 0 00 000000 0122379999999998754211 0
Q ss_pred CCeeEEEEEeeeec------cCC---CCCC--------------CcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHH
Q 012522 313 LPILGVFRSFSAVG------VDP---SVMG--------------IGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVY 369 (461)
Q Consensus 313 ~~~~a~i~g~~~~~------~~p---~~~~--------------~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~ 369 (461)
..+..++......- ..+ ...+ ......++++|+++|++.+|||+|.+|+....+...
T Consensus 237 ~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqgg~~il~~ 316 (401)
T PLN03170 237 ERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQ 316 (401)
T ss_pred cCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEecCCcHHHHHH
Confidence 11111222221100 000 0001 012357889999999999999999999999999999
Q ss_pred HHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHc----c--C-CCC--CEEEEEecccCccee-EEEEEE
Q 012522 370 CIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKR----R--G-KDC--RFGVISMCIGSGMGA-AAVFER 437 (461)
Q Consensus 370 ~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~----~--~-~~~--~~gl~~~~~g~G~g~-A~v~~~ 437 (461)
..+.||++++++..+ --.--+||...+| +..++.++++ + . ++. +++|+.. .|.|+.+ +++|++
T Consensus 317 v~~~Lgl~~~~~~~s~~~l~~~GNtsSas----v~~vL~~~~~~~~~~g~~~~G~~~~~~ll~a-fGpG~t~~~~ll~~ 390 (401)
T PLN03170 317 VEAKVGLEKERMRATRHVLSEYGNMSSAC----VLFILDEMRKRSAEDGQATTGEGFDWGVLFG-FGPGLTVETVVLHS 390 (401)
T ss_pred HHHHcCCChHHHHHHHHHHHHhCccHHhH----HHHHHHHHHHhHhhcCCCCCCCCccEEEEEE-eCchHhHHhHHhee
Confidence 999999999885311 1113356655555 4455555531 1 1 121 5566654 3666554 455554
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-18 Score=177.75 Aligned_cols=254 Identities=15% Similarity=0.107 Sum_probs=166.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC-CeEEeCCCCchHHHHHHHHHHHH
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV-PLRTVNRQCSSGLQAVADVATAI 151 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~-~~~~v~~~CaSgl~Al~~A~~~I 151 (461)
...+|+.+|+++||+++|++++|||.||++++++.. .|..+..++..||++..+ .+++++.+|++++++|..|..+|
T Consensus 100 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~--~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i 177 (389)
T PLN03168 100 QVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVN--MPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLA 177 (389)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCC--CccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998854 477899999999996443 48999999999999999999999
Q ss_pred HcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCC
Q 012522 152 KAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231 (461)
Q Consensus 152 ~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag 231 (461)
++|....|||+++|.+|..
T Consensus 178 ~~~~~~~VLVV~~E~~S~~------------------------------------------------------------- 196 (389)
T PLN03168 178 ENNKGARVLAVASEVTAVT------------------------------------------------------------- 196 (389)
T ss_pred HhCCCCEEEEEEEehhhhh-------------------------------------------------------------
Confidence 9999999999999998861
Q ss_pred CCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhc
Q 012522 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQK 311 (461)
Q Consensus 232 ~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~ 311 (461)
|+. +++ .+.+.+ -.++.+||||+|+||...+... .
T Consensus 197 -~~~-----------------------~~~-----~~~~~~---------------~~~~LFGDGAaAvvl~~~~~~~-~ 231 (389)
T PLN03168 197 -YRA-----------------------PSE-----NHLDGL---------------VGSALFGDGAGVYVVGSDPKPE-V 231 (389)
T ss_pred -ccC-----------------------ccc-----ccHHHH---------------hccccccCccEEEEEecCCCCc-c
Confidence 100 000 000000 1223389999999999753211 0
Q ss_pred CCCeeEEEEEeeee------c---cCCCC-------CC-------CcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHH
Q 012522 312 GLPILGVFRSFSAV------G---VDPSV-------MG-------IGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYV 368 (461)
Q Consensus 312 g~~~~a~i~g~~~~------~---~~p~~-------~~-------~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~ 368 (461)
. .++-.+...... + ..... +. ......++++|+..|+...|+++|.+|+....+..
T Consensus 232 ~-~~~~~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~~d~~~~v~Hqgg~~Il~ 310 (389)
T PLN03168 232 E-KALFEVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPDWNEMFWAVHPGGPAILD 310 (389)
T ss_pred C-CcceEEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCccccceEEecCCcHHHHH
Confidence 0 111122221110 0 00000 00 01235667778888888888999999999999999
Q ss_pred HHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccC-----CCCCEEEEEecccCccee-EEEEE
Q 012522 369 YCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRG-----KDCRFGVISMCIGSGMGA-AAVFE 436 (461)
Q Consensus 369 ~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~-----~~~~~gl~~~~~g~G~g~-A~v~~ 436 (461)
...+.|||+++++-.+ .-+--+||...+|-...+-++..+-.++. ++.++++.... |.|+.+ +++|+
T Consensus 311 ~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~~~g~~~~ll~af-GpG~t~~~~llr 384 (389)
T PLN03168 311 QVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQRSVKMGASTLGEGSEFGFFIGF-GPGLTLEVLVLR 384 (389)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHHHhhcCCCCCCCCccEEEEEEE-cchhhhhhhhhe
Confidence 9999999999886321 11234666666654433333322200110 12256666553 556554 34443
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.8e-18 Score=175.61 Aligned_cols=221 Identities=15% Similarity=0.090 Sum_probs=153.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC-CeEEeCCCCchHHHHHHHHHHHHH
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV-PLRTVNRQCSSGLQAVADVATAIK 152 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~-~~~~v~~~CaSgl~Al~~A~~~I~ 152 (461)
..+|+.+|+++||+++|++++|||.||+.++++.. .|..+.+++..||++..+ .++.++.+|++++.+|..|.++++
T Consensus 102 a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~--~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~ 179 (391)
T PLN03173 102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAE 179 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc--ccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999988754 477888999999996544 467889999999999999999999
Q ss_pred cCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 012522 153 AGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGK 232 (461)
Q Consensus 153 sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~ 232 (461)
++..+.|||+++|.+|..
T Consensus 180 ~~~~~~vLVV~~E~~S~~-------------------------------------------------------------- 197 (391)
T PLN03173 180 NNKGARVLVVCSEITAVT-------------------------------------------------------------- 197 (391)
T ss_pred hCCCCeEEEEEEehhhhh--------------------------------------------------------------
Confidence 999999999999998840
Q ss_pred CccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcC
Q 012522 233 FKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKG 312 (461)
Q Consensus 233 ~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g 312 (461)
|. ..++ + +.+.+ -.++.+||||+|+||+..+. .+
T Consensus 198 ~~-----------------------~~~d--~---~~~~~---------------v~~~LFGDGAaAvvl~~~~~---~~ 231 (391)
T PLN03173 198 FR-----------------------GPSD--T---HLDSL---------------VGQALFGDGAAAIIIGSDPV---LG 231 (391)
T ss_pred hC-----------------------Cccc--c---chhhh---------------hhhhhhcCceEEEEEeCCCC---CC
Confidence 00 0000 0 00000 01223799999999987432 11
Q ss_pred C-CeeEEEEEeeee---cc---------C--------CCCC---CCcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHH
Q 012522 313 L-PILGVFRSFSAV---GV---------D--------PSVM---GIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYV 368 (461)
Q Consensus 313 ~-~~~a~i~g~~~~---~~---------~--------p~~~---~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~ 368 (461)
. .+.-.+.++... .. . +..+ .......++++|+++|++.+|||+|.+|+.......
T Consensus 232 ~~~~~~~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqgg~~Il~ 311 (391)
T PLN03173 232 VEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILD 311 (391)
T ss_pred cCCcceEEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEECCCcHHHHH
Confidence 1 111122221110 00 0 0000 012235788999999999999999999999999999
Q ss_pred HHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHH
Q 012522 369 YCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVAT 404 (461)
Q Consensus 369 ~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~ 404 (461)
...+.|||+++++-.+ --.--+||...+|-...+-+
T Consensus 312 ~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~ 348 (391)
T PLN03173 312 QVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDE 348 (391)
T ss_pred HHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHH
Confidence 9999999999885321 11133566665554333333
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.9e-16 Score=165.15 Aligned_cols=96 Identities=17% Similarity=0.210 Sum_probs=87.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeC-CCCchHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATA 150 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~CaSgl~Al~~A~~~ 150 (461)
....+++..|+++||+++|++|+|||.||+ ++++... .|..+.+++.++|++.++..++++ .+|++++.+|..|.++
T Consensus 170 ~ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~-~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~l 247 (502)
T PLN02377 170 EEAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNP-TPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDM 247 (502)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCC-CCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHH
Confidence 356889999999999999999999999988 6777754 678899999999997678999999 6999999999999999
Q ss_pred HHcCCCCEEEEEeeccccc
Q 012522 151 IKAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~~s~ 169 (461)
|++|....+||+++|.+|.
T Consensus 248 l~~~~~~~aLVVstE~~S~ 266 (502)
T PLN02377 248 LQVHRNTYAVVVSTENITQ 266 (502)
T ss_pred HHcCCCCEEEEEEEecccc
Confidence 9999999999999999987
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.9e-16 Score=163.73 Aligned_cols=94 Identities=17% Similarity=0.257 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeC-CCCchHHHHHHHHHHHHH
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATAIK 152 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~CaSgl~Al~~A~~~I~ 152 (461)
.+.....|+.++|+++|++|+|||.||+. ++++.. .|..+.+++.++|++.++..++++ .+|++++.+|..|.++|+
T Consensus 188 a~~v~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p-~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~ 265 (521)
T PLN02854 188 AEAVMFGALDSLFSKTGVKPRDIGILIVN-CSLFNP-TPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLK 265 (521)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCC-CCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHH
Confidence 45667788999999999999999999985 556644 678899999999997678999998 899999999999999999
Q ss_pred cCCCCEEEEEeeccccc
Q 012522 153 AGLYDIGIAAGLESMTV 169 (461)
Q Consensus 153 sG~~d~vLv~G~E~~s~ 169 (461)
+|....+||+++|.+|.
T Consensus 266 ~~~~~~aLVVstE~~S~ 282 (521)
T PLN02854 266 ANPNSYAVVVSTENITL 282 (521)
T ss_pred hCCCCeEEEEEEeeeec
Confidence 99999999999999884
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.1e-16 Score=152.92 Aligned_cols=234 Identities=21% Similarity=0.282 Sum_probs=158.0
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
.+....+|+.+|+++||+++|++++|||.+++|+. ... ...+..++..+|+ |.+.++.+|+|+..+|..|+.
T Consensus 46 ~EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl-~~Q---~~~As~vA~~LGI----P~fdV~~ACSTf~~AL~lAa~ 117 (327)
T TIGR02845 46 WEKAERKLMEDAVNLALKKANLKKDDVDFFLAGDL-LNQ---IITANFVARDLGI----PFLGLYGACSTSMETLALGAM 117 (327)
T ss_pred cchhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCC-CCc---ccHHHHHHHHhCC----CEEEEeccCHHHHHHHHHHHH
Confidence 34567889999999999999999999999999974 321 3467788899997 569999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.+|++||+++|.++..-.
T Consensus 118 lI~SG~ad~VLVV~Ssh~S~AEr--------------------------------------------------------- 140 (327)
T TIGR02845 118 LVDGGFADRVLAATSSHYATAER--------------------------------------------------------- 140 (327)
T ss_pred HHhCCCCCEEEEEEecccchhhh---------------------------------------------------------
Confidence 99999999999999998885100
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
.|+- |.+ +|.-+...+.-++|||+|+||.+.+..-
T Consensus 141 --qfr~---p~e----------------------------------------yg~q~~~ta~~tgdGAGA~vl~~~~~~~ 175 (327)
T TIGR02845 141 --QFRY---PTE----------------------------------------YGVQKPPTAQWTVTGAGAVLLASTGGGP 175 (327)
T ss_pred --hccc---ccc----------------------------------------cccCCCCeeeEEEcccEEEEEeecCCCC
Confidence 0110 000 0111111222379999999998754211
Q ss_pred hcCCCeeEEEEEeeeeccCCCCCCCcHHH----HHHHHHHHcCCCCCCccEEEecCCChHHHHH---HHHHcCCCCC---
Q 012522 310 QKGLPILGVFRSFSAVGVDPSVMGIGPAV----AIPAAVKSAGLQIDDINLFEINEAFASQYVY---CIKKLGLDPE--- 379 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~~~~p~~~~~~~~~----ai~~aL~~AGl~~~DID~~eiheafa~~~~~---~~e~LGl~~~--- 379 (461)
+...--.++|+.++. .+|..||.++++ .|.+-|+..|.+++|.|++..-|--.+-..+ .+++-|++-.
T Consensus 176 ~i~~~t~gkv~d~g~--~d~~nmgaamapaa~dti~~h~~d~~~~~~~yd~i~tgdlg~vg~~i~~~ll~~~g~~~~~~~ 253 (327)
T TIGR02845 176 RITSATIGKVVDYGI--TDPLDMGAAMAPAAADTIEAHFKDTGRSVDDYDLIVTGDLARVGSEILRKLLKERGYDVTERY 253 (327)
T ss_pred ceEEEEEEEEEecCC--CCcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEecchHHHHHHHHHHHHHHcCCChhhcc
Confidence 111112345555554 578889876654 5677788999999999999877765542222 2233344321
Q ss_pred -----------CcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEE
Q 012522 380 -----------KVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVIS 422 (461)
Q Consensus 380 -----------~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~ 422 (461)
+-.-.||+ -.||+.......++.+|++. .-++.|+-
T Consensus 254 ~dcg~~iy~~~~~~~aggs-----gc~csa~v~~~~~~~~~~~g--~~~r~l~v 300 (327)
T TIGR02845 254 DDCGVMIYRPDQQVFAGGS-----GCACSAVVTYGHILKEMLRG--KLKKVLVV 300 (327)
T ss_pred ccCCeEEEcCCCcccCCCc-----ccchhHHHHHHHHHHHHhcC--cceEEEEE
Confidence 11223332 22566666667788888876 55555554
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.7e-16 Score=154.14 Aligned_cols=230 Identities=20% Similarity=0.266 Sum_probs=179.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
.+++...|+++|++.+|+++++||++|+.|++|+-++... .-..+.+++..+|+++....+++..+|-+|..||+.|..
T Consensus 47 ~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~-~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~ 125 (377)
T COG3425 47 WDEDAVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDA-VKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIG 125 (377)
T ss_pred CchhHHHHHHHHHHHHHhccCCCHHHCceEEEecCCCccc-ccchHHHHHHHhCCCCceehhhHHHHHHHHHHHHHHHHH
Confidence 4778899999999999999999999999999999988776 556788999999998889999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|.+|..+.+||+|.|...-.+.
T Consensus 126 ~v~s~~~~~~LvI~sD~a~~~~~--------------------------------------------------------- 148 (377)
T COG3425 126 WVESGMISYGLVIGADTAQYAPG--------------------------------------------------------- 148 (377)
T ss_pred HHHcCCccceEEEeehhhccCCC---------------------------------------------------------
Confidence 99999999999999887432110
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
+ ..+| . .|+||+|+|+...+
T Consensus 149 -------------------~------------------------~~E~-------t-------~GAGavA~lIg~n~--- 168 (377)
T COG3425 149 -------------------D------------------------ALEY-------T-------AGAGAVAFLIGKNP--- 168 (377)
T ss_pred -------------------c------------------------ccCc-------c-------CCCceEEEEEccCC---
Confidence 0 0011 1 59999999999742
Q ss_pred hcCCCeeEEEEEeeeeccC------CCCC------C--------CcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHH
Q 012522 310 QKGLPILGVFRSFSAVGVD------PSVM------G--------IGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVY 369 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~~~~------p~~~------~--------~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~ 369 (461)
...+...+......+ |... + .....+++..+++.|++++|+|++..|.+|.-+..-
T Consensus 169 ----~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k~~~k 244 (377)
T COG3425 169 ----PIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGKFPKK 244 (377)
T ss_pred ----CeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCchHHH
Confidence 123333333332211 1111 0 123468888999999999999999999999999999
Q ss_pred HHHHcCCCCCCcCCCCCcc-cccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEe
Q 012522 370 CIKKLGLDPEKVNVNGGAV-ALGHPLGATGARCVATLLSEMKRRGKDCRFGVISM 423 (461)
Q Consensus 370 ~~e~LGl~~~~vn~~GG~~-~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~ 423 (461)
.++.|++.+++|-++=-.. .+|+.+.++....++.++.+-. .+|.|+++++.
T Consensus 245 a~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~--~~G~rIl~~SY 297 (377)
T COG3425 245 AAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK--LPGDRILLFSY 297 (377)
T ss_pred HHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC--CCCCEEEEEee
Confidence 9999999977665543223 4799998888888877777766 24788888887
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.2e-16 Score=157.87 Aligned_cols=110 Identities=7% Similarity=0.042 Sum_probs=96.5
Q ss_pred EEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCe
Q 012522 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL 130 (461)
Q Consensus 51 v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~ 130 (461)
.++.|.+.+.+... -.+++..+|+.+|++++|+++ ++++||.+++++.++... .+..+..++..||++..+++
T Consensus 30 ~~~~g~G~~~~~~~----~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~-~~s~a~~v~~~Lgl~~~~~~ 102 (379)
T TIGR01835 30 KFHIGIGQKKMAVP----PIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQ-SKAAAVYVHGLLGLQPFCRS 102 (379)
T ss_pred HHHhhcCceEEeeC----CCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCC-CCCHHHHHHHHhCCCCCceE
Confidence 35567777777642 257778999999999999998 899999999999988865 56788999999999766899
Q ss_pred EEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccc
Q 012522 131 RTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167 (461)
Q Consensus 131 ~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~ 167 (461)
+++..+|.+++.||..|.++|++|..+.+||+++|..
T Consensus 103 ~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a 139 (379)
T TIGR01835 103 FELKQACYGATAALQMAKGHVALSPDRKVLVIASDIA 139 (379)
T ss_pred EEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehh
Confidence 9999999999999999999999999999999999874
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.5e-16 Score=160.24 Aligned_cols=94 Identities=13% Similarity=0.246 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeC-CCCchHHHHHHHHHHHHH
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATAIK 152 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~CaSgl~Al~~A~~~I~ 152 (461)
..+|+.+|+++||+++|++|+|||.||+.++++.. .|..+.+++.++|++.++..++++ .+|++++.+|..|.++++
T Consensus 148 a~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~--~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~ 225 (478)
T PLN02932 148 TEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNP--TPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQ 225 (478)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC--CCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHH
Confidence 67899999999999999999999999999988874 588899999999997679999999 899999999999999999
Q ss_pred cCCCCEEEEEeeccccc
Q 012522 153 AGLYDIGIAAGLESMTV 169 (461)
Q Consensus 153 sG~~d~vLv~G~E~~s~ 169 (461)
+|....+||+++|.+|.
T Consensus 226 ~~~~~~aLVVstE~~S~ 242 (478)
T PLN02932 226 VHRNTYALVVSTENITQ 242 (478)
T ss_pred cCCCCeEEEEEEeeccc
Confidence 99999999999999997
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=3e-15 Score=146.35 Aligned_cols=239 Identities=20% Similarity=0.260 Sum_probs=157.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
.+....+|+.+|+++||+++|++++|||.+++|+.... ...+..++..+|+ |++.++.+|+|+..+|.+|+.
T Consensus 52 wEkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q----~~sAs~vA~~LGI----Pa~dV~gACST~~~AL~lAa~ 123 (337)
T PRK08304 52 WEKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ----IISANFAARELGI----PFLGLYGACSTMMESLALGSM 123 (337)
T ss_pred ccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC----cchHHHHHHHhCC----cEEEEeccCHHHHHHHHHHHH
Confidence 35677889999999999999999999999999975321 3456778888886 799999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.+|++|+++.|.++..--
T Consensus 124 lI~SG~ad~VLVV~Ssh~s~aer--------------------------------------------------------- 146 (337)
T PRK08304 124 LIDGGFADRVLAATSSHFATAER--------------------------------------------------------- 146 (337)
T ss_pred HHhcCCCCEEEEEEcchhhhhhh---------------------------------------------------------
Confidence 99999999999999999887210
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
+|+ .|.+.-. .||-... . .+|||+|+||.+...--
T Consensus 147 --qfr---~P~eyg~------------------------------qrp~taq---w-------tvtGAGA~i~~~~~~~~ 181 (337)
T PRK08304 147 --QFR---FPTEYGG------------------------------QRPPTAQ---W-------TVTGAGAVLLSREGSGP 181 (337)
T ss_pred --hcc---Cchhccc------------------------------cCCCcce---E-------EeeccEEEEEecCCCCc
Confidence 121 1222111 1121111 1 58999999998652110
Q ss_pred hcCCCeeEEEEEeeeeccCCCCCCCcHH----HHHHHHHHHcCCCCCCccEEEecCCChHHHH---HHHHHcCCCCC-Cc
Q 012522 310 QKGLPILGVFRSFSAVGVDPSVMGIGPA----VAIPAAVKSAGLQIDDINLFEINEAFASQYV---YCIKKLGLDPE-KV 381 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~~~~p~~~~~~~~----~ai~~aL~~AGl~~~DID~~eiheafa~~~~---~~~e~LGl~~~-~v 381 (461)
+...--.++|+.++. .||..||.+++ ..|.+-|+..|.+++|.|++..-|--.+-.. -.+++-|++-. +.
T Consensus 182 ~i~~~t~Gkv~D~g~--~d~~nmgaaMapAa~dti~~h~~d~~~~~~~yDli~tGDlg~vG~~i~~~ll~~~g~~~~~~~ 259 (337)
T PRK08304 182 RITHATIGKVVDLGI--KDPNDMGAAMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLGRVGREILKELLKEEGYDIGDNY 259 (337)
T ss_pred eEEEEeEEEEEecCC--CCcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEEcchHHHHHHHHHHHHHHhCCChhhcc
Confidence 000011244444444 57888887665 4567778899999999999987776554222 22333355431 11
Q ss_pred CCCCCcccc---------cCchhhHHHHHHHHHHHHHHccCCCCCEEEEE
Q 012522 382 NVNGGAVAL---------GHPLGATGARCVATLLSEMKRRGKDCRFGVIS 422 (461)
Q Consensus 382 n~~GG~~~~---------Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~ 422 (461)
+-.|-+++- |--.||+.......++.+|++. .-++.|+-
T Consensus 260 ~DcG~~iy~~~~q~~~aGgSGc~csa~v~~~~~~~~~~~g--~~~rvl~v 307 (337)
T PRK08304 260 NDCGLMIYDSEQQDVFAGGSGCACSAVVTYGYLLKELQKG--KLKRVLVV 307 (337)
T ss_pred cccCeEEeccCCCcccCCCcccchhHHHHHHHHHHHHhcC--CceEEEEE
Confidence 111111110 1123566666667788888877 55555554
|
|
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1e-15 Score=158.49 Aligned_cols=111 Identities=13% Similarity=0.181 Sum_probs=93.4
Q ss_pred EEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHH---HHcCCCCCCC
Q 012522 53 IVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAA---FYAGFPETVP 129 (461)
Q Consensus 53 Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia---~~lGl~~~~~ 129 (461)
.+|.++..+.-. -.+++..+|++.|++.+|+++|++|++||.|++++.+++.. .+..+..++ ..+|. .++.
T Consensus 36 ~~GI~~r~~ava----~~~Ed~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~-~ps~A~~v~~ll~~LG~-~~~~ 109 (459)
T PLN02577 36 TIGLGQDCMAFC----TDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDK-SKSIKTFLMQLFEESGN-TDIE 109 (459)
T ss_pred hhccceeEeccC----CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCchHHHHHHHHHHhCC-CCcE
Confidence 356666554311 25789999999999999999999999999999999999766 677777664 46777 4689
Q ss_pred eEEeCCCCchHHHHHHHHHHHHHcCCC--CEEEEEeeccccc
Q 012522 130 LRTVNRQCSSGLQAVADVATAIKAGLY--DIGIAAGLESMTV 169 (461)
Q Consensus 130 ~~~v~~~CaSgl~Al~~A~~~I~sG~~--d~vLv~G~E~~s~ 169 (461)
+++++.+|.++..||..|..+|++|.. +.+||+|+|.++.
T Consensus 110 afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~ 151 (459)
T PLN02577 110 GVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVY 151 (459)
T ss_pred EeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhc
Confidence 999999999999999999999999975 9999999998654
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.7e-15 Score=154.42 Aligned_cols=94 Identities=14% Similarity=0.239 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeC-CCCchHHHHHHHHHHHHH
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATAIK 152 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~CaSgl~Al~~A~~~I~ 152 (461)
.++++..|+++||+++|++|+|||.||+.+ +++.. .|..+.+++.++|+..++..++++ .+|++++.+|..|.++++
T Consensus 176 a~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~-S~~~~-~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~ 253 (511)
T PLN02192 176 AETVMFGAIDQLLAKTSVKPKDIGILIVNC-SLFNP-TPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQ 253 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEC-CCCCC-CchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHH
Confidence 567889999999999999999999998864 45544 678889999999997678999999 699999999999999999
Q ss_pred cCCCCEEEEEeeccccc
Q 012522 153 AGLYDIGIAAGLESMTV 169 (461)
Q Consensus 153 sG~~d~vLv~G~E~~s~ 169 (461)
++....+||+++|.+|.
T Consensus 254 a~~~~~aLVVstE~~S~ 270 (511)
T PLN02192 254 VHPNSYALVISMENITL 270 (511)
T ss_pred cCCCCeEEEEEEEeccc
Confidence 99999999999999984
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.6e-13 Score=140.48 Aligned_cols=108 Identities=13% Similarity=0.109 Sum_probs=91.7
Q ss_pred EEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHc---CCCCCCC
Q 012522 53 IVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYA---GFPETVP 129 (461)
Q Consensus 53 Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~l---Gl~~~~~ 129 (461)
.+|.++..+.-. .++++..+|+..|++.+|++++++|++||.|++++.+++.. .+..+.+++..+ |. .++.
T Consensus 33 ~~GI~~rr~av~----~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~-sps~a~~v~~lL~~lG~-~~~~ 106 (454)
T TIGR01833 33 TIGLGQTKMGFC----TDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDK-SKSVKTVLMQLFEESGN-TDVE 106 (454)
T ss_pred eechhheecccC----CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CCchHHHHHHHHHhcCC-CCce
Confidence 466666653211 25789999999999999999999999999999999999876 677787777744 55 4789
Q ss_pred eEEeCCCCchHHHHHHHHHHHHHcCC--CCEEEEEeecc
Q 012522 130 LRTVNRQCSSGLQAVADVATAIKAGL--YDIGIAAGLES 166 (461)
Q Consensus 130 ~~~v~~~CaSgl~Al~~A~~~I~sG~--~d~vLv~G~E~ 166 (461)
+++++.+|.++..||..|..+|++|. .+.+||+++|.
T Consensus 107 ~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi 145 (454)
T TIGR01833 107 GIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI 145 (454)
T ss_pred EEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence 99999999999999999999999996 49999999988
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.9e-14 Score=153.69 Aligned_cols=262 Identities=22% Similarity=0.267 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCCc----cc--------------hHHHHHHHHcCCCCCCCeEE
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGST----RA--------------MECRMAAFYAGFPETVPLRT 132 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~~----~~--------------~~a~~ia~~lGl~~~~~~~~ 132 (461)
..|+.++..+|+-|+||+|.+.. ++++|...+.... .+ ..+..++.-+.+ .+|.+.
T Consensus 88 ~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDf--qGPS~s 165 (2376)
T KOG1202|consen 88 LRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDF--QGPSFS 165 (2376)
T ss_pred HHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEec--cCCchh
Confidence 57999999999999999998877 4677766554320 00 122233333444 799999
Q ss_pred eCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHH
Q 012522 133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE 212 (461)
Q Consensus 133 v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~ 212 (461)
++++|+|.+.|++.|.+.|++|++|.+||.|+...-.-.. .+
T Consensus 166 ~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~-----------------------sl--------------- 207 (2376)
T KOG1202|consen 166 VDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTT-----------------------SL--------------- 207 (2376)
T ss_pred hhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccch-----------------------hh---------------
Confidence 9999999999999999999999999999999876544110 00
Q ss_pred HHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCccccCCC
Q 012522 213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNA 290 (461)
Q Consensus 213 ~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~lt~~~~ 290 (461)
.|-+ --++++|..++. ||. +|+.
T Consensus 208 -------------------QFlR------------------Lgmls~dGsCka-------------FDeagnGY~----- 232 (2376)
T KOG1202|consen 208 -------------------QFLR------------------LGMLSPDGSCKA-------------FDEAGNGYC----- 232 (2376)
T ss_pred -------------------HHHH------------------hcCcCCCCcccc-------------hhccCCcee-----
Confidence 0000 013455544443 776 7787
Q ss_pred CcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC------CCCCcHHHHHHHHHHHcCCCCCCccEEEec----
Q 012522 291 SQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS------VMGIGPAVAIPAAVKSAGLQIDDINLFEIN---- 360 (461)
Q Consensus 291 ~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~------~~~~~~~~ai~~aL~~AGl~~~DID~~eih---- 360 (461)
.+||.++++|.+...|++. ++.|+...++..... ..|.-...-+++.|+++|+.|+++-|+|.|
T Consensus 233 --Rseg~~avllqrk~~ArRv----YAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGT 306 (2376)
T KOG1202|consen 233 --RSEGVVAVLLQRKSLARRV----YATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGT 306 (2376)
T ss_pred --ecCceEEEEEehhHHHHHH----HHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCC
Confidence 6999999999999988874 444544444332211 122234578999999999999999999988
Q ss_pred ------CCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc----------------------
Q 012522 361 ------EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR---------------------- 412 (461)
Q Consensus 361 ------eafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~---------------------- 412 (461)
|++.+...+|... ..|+-+..-+.++||+--|+|...++.++..|.+.
T Consensus 307 kVGDpQEaN~it~~fC~~R----t~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGr 382 (2376)
T KOG1202|consen 307 KVGDPQEANGITRFFCATR----TTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGR 382 (2376)
T ss_pred CCCChHHhhhHHHHHhhcC----CCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccce
Confidence 4555555655421 24555555567799999999999999999999876
Q ss_pred ---------CCCCCEEEEEecccCcceeEEEEEEccchh
Q 012522 413 ---------GKDCRFGVISMCIGSGMGAAAVFERGDCVD 442 (461)
Q Consensus 413 ---------~~~~~~gl~~~~~g~G~g~A~v~~~~~~~~ 442 (461)
.+|+-+|+-++ +-||.+..+|++...+..
T Consensus 383 LkVVd~~lp~~GGivGiNSF-GFGGsN~HviLks~~~~~ 420 (2376)
T KOG1202|consen 383 LKVVDRPLPWRGGIVGINSF-GFGGSNAHVILKSNTKPK 420 (2376)
T ss_pred eEEecCCCCccCceeeeecc-ccCCCceeEEeccCCCCC
Confidence 13556676664 445678899998776543
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=8.2e-13 Score=128.60 Aligned_cols=237 Identities=19% Similarity=0.213 Sum_probs=151.2
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAI 151 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I 151 (461)
....+|+.+|+++||+++||+++|||.+++|+..... .++..++..+|+ |.+.+.++|+|+..+|.+|+.+|
T Consensus 52 kAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~----ipssfvar~LGI----P~~gV~gACSTg~eAL~lAa~~V 123 (334)
T PRK12404 52 KAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQI----TPTSFAARTLGI----PYLGLFGACSTSMEGLALAALIV 123 (334)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCc----CcHHHHHHHhCC----CccceeecCHHHHHHHHHHHHHH
Confidence 3445899999999999999999999999999987332 344578888986 56999999999999999999999
Q ss_pred HcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCC
Q 012522 152 KAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231 (461)
Q Consensus 152 ~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag 231 (461)
++|.+|++|++-+-..... + +
T Consensus 124 aSG~Ad~VLavtsSH~~~a-------------------------------------------------------E--r-- 144 (334)
T PRK12404 124 NSGGAKYVLTGASSHNAAV-------------------------------------------------------E--K-- 144 (334)
T ss_pred HcCCCCEEEEEeCcccchh-------------------------------------------------------h--h--
Confidence 9999999999764333320 0 0
Q ss_pred CCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhc
Q 012522 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQK 311 (461)
Q Consensus 232 ~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~ 311 (461)
.|| .|.+.- ..||....| ..-||+|+||.+....-+.
T Consensus 145 qfR---~P~eyG------------------------------~Qrp~taqw----------TvTgaga~~l~~~~~~~~i 181 (334)
T PRK12404 145 QFR---YPTEYG------------------------------GQKPPTAQW----------TVTGAGAAILSKTGDGPRV 181 (334)
T ss_pred hcc---Cccccc------------------------------CcCCCcccE----------EEEceEEEEEecCCCCceE
Confidence 122 222221 122211111 3569999999864210000
Q ss_pred CCCeeEEEEEeeeeccCCCCCCCcHHH----HHHHHHHHcCCCCCCccEEEecCCChHHHHH---HHHHcCCCC--CCcC
Q 012522 312 GLPILGVFRSFSAVGVDPSVMGIGPAV----AIPAAVKSAGLQIDDINLFEINEAFASQYVY---CIKKLGLDP--EKVN 382 (461)
Q Consensus 312 g~~~~a~i~g~~~~~~~p~~~~~~~~~----ai~~aL~~AGl~~~DID~~eiheafa~~~~~---~~e~LGl~~--~~vn 382 (461)
..--.++|+.++. .||..||.++++ .|.+-|+..|.+++|.|++..-|--.+-..+ .+++-|++- ++.+
T Consensus 182 ~~~T~Gkv~D~g~--~d~~nMGaaMAPAA~dti~~h~~d~~~~~~~yDlI~TGDLg~vG~~i~~~ll~~~g~~~~~~~~~ 259 (334)
T PRK12404 182 TSATIGRVVDMGL--TDPFNMGGAMAPAAVDTIEAHLRDRQIDASYYDLIVTGDLGHVGREIAKDLLHKHGVKVPEEQFQ 259 (334)
T ss_pred EEEEEEEEEecCC--CCcccchhhhhHHHHHHHHHHHHHhCCChhhccEEEEcchHHHHHHHHHHHHHHcCCCCCccccc
Confidence 0001244554444 578889876654 5677788899999999999877765542222 223334432 2222
Q ss_pred CCCCccc--------ccCchhhHHHHHHHHHHHHHHccCCCCCEEEEE
Q 012522 383 VNGGAVA--------LGHPLGATGARCVATLLSEMKRRGKDCRFGVIS 422 (461)
Q Consensus 383 ~~GG~~~--------~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~ 422 (461)
-.|-++. =|--.||+.......++.+|++. .-++.|+-
T Consensus 260 DCG~~iyd~~~~~~aGgSGcgcsA~v~~g~~~~~~~~g--~~~rvL~v 305 (334)
T PRK12404 260 DCGLLIYREGQPVIAGASGPGCSATVTYGHLLNRMKRG--ELKRILVV 305 (334)
T ss_pred ccCeEEecCCCcccCCCcccchHHHHHHHHHHHHHhcC--CceEEEEE
Confidence 2221111 01122566666666778888876 55555554
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.2e-13 Score=127.90 Aligned_cols=253 Identities=18% Similarity=0.161 Sum_probs=168.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe-CCCCchHHHHHHHHHHHHH
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NRQCSSGLQAVADVATAIK 152 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~CaSgl~Al~~A~~~I~ 152 (461)
...|..++.++||+.+++.|+|||.|++.++++-.. |.+-..+...||+++.+.-+-+ .-+|+.|..++..|+++.+
T Consensus 76 a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~--Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~r 153 (356)
T COG3424 76 AVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLAT--PSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCR 153 (356)
T ss_pred HHHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccC--CChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHh
Confidence 457899999999999999999999999999987765 5555567779999766655555 5889999999999999999
Q ss_pred cCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 012522 153 AGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGK 232 (461)
Q Consensus 153 sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~ 232 (461)
..-...+|++.+|.+|-.
T Consensus 154 a~P~~~vlvV~vELCSLt-------------------------------------------------------------- 171 (356)
T COG3424 154 AAPDANVLVVCVELCSLT-------------------------------------------------------------- 171 (356)
T ss_pred hCccceEEEEEeeeeeee--------------------------------------------------------------
Confidence 999999999999999861
Q ss_pred CccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcC
Q 012522 233 FKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKG 312 (461)
Q Consensus 233 ~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g 312 (461)
|.. .+++ ++ ..+ ..+.++||+||+|++....++...
T Consensus 172 ~~~--------~d~t--------------------------~s-------~lV---gtaLF~DG~AA~vv~gd~~~~~~~ 207 (356)
T COG3424 172 YVF--------ADDT--------------------------KS-------NLV---GTALFGDGAAAVVVSGDRRAEGKR 207 (356)
T ss_pred eec--------CCCC--------------------------cc-------cce---eeeeecCCeeEEEEeccccccccC
Confidence 000 0000 00 001 233489999999999754433221
Q ss_pred -CCee------------EEEEEeeeecc------C---CCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHH
Q 012522 313 -LPIL------------GVFRSFSAVGV------D---PSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYC 370 (461)
Q Consensus 313 -~~~~------------a~i~g~~~~~~------~---p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~ 370 (461)
..|. -.+.||+.... . |...-......+...|...|++.+||+.|.+|---....-..
T Consensus 208 ~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG~KVida~ 287 (356)
T COG3424 208 PLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGPKVIDAY 287 (356)
T ss_pred CCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCchhhhceeeeCCCCchHHHHH
Confidence 1121 01222222110 0 111111235678899999999999999999999988888888
Q ss_pred HHHcCCCCCCcCCCCC-cccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEEc
Q 012522 371 IKKLGLDPEKVNVNGG-AVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 371 ~e~LGl~~~~vn~~GG-~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
.+.|||+++.+..+=- +--+||-..+|-+..+-+.+.+- .+.+.+||+.++ |-|+..=.+|.+.
T Consensus 288 ~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~---~~~g~~Gl~~A~-GPGf~sElvL~~w 352 (356)
T COG3424 288 EESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA---PKSGSRGLMFAM-GPGFCSELVLLDW 352 (356)
T ss_pred HHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc---CCCCcceeeeec-CCcceeeeeeEEe
Confidence 8999999864322111 12256666666443333333322 336778888764 6665554444443
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.48 E-value=1e-12 Score=135.07 Aligned_cols=96 Identities=21% Similarity=0.250 Sum_probs=82.6
Q ss_pred CCHHHHHHH-HHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCC-CCchHHHHHHHHHH
Q 012522 72 TLADDLLAP-VLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNR-QCSSGLQAVADVAT 149 (461)
Q Consensus 72 ~~~~eL~~~-A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~-~CaSgl~Al~~A~~ 149 (461)
....||+.. |++++|+++|++|+|||.||+ ++++... .|..+..+...+|++.++..++++. +|++++.+|..|.+
T Consensus 131 ~~e~em~i~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~-~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ 208 (466)
T PLN00415 131 RHESELVIFGALNSLFKKTGIEPREVGIFIV-NCSLFNP-NPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATN 208 (466)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECcCCCC-CchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHH
Confidence 445566665 777889999999999999886 4555533 5778888999999987899999997 99999999999999
Q ss_pred HHHcCCCCEEEEEeeccccc
Q 012522 150 AIKAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~ 169 (461)
+++++....+||+++|.+|.
T Consensus 209 ll~a~~~~~aLVVs~E~~S~ 228 (466)
T PLN00415 209 LLKANPNTYAVIVSTENMTL 228 (466)
T ss_pred HHHhCCCCEEEEEEEecccc
Confidence 99999999999999999886
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.7e-11 Score=117.09 Aligned_cols=93 Identities=23% Similarity=0.376 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC-----eEEEEeecCCC-------------C----------ccchHHHHHHHHcCCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG-----DIVVGTVLAPG-------------S----------TRAMECRMAAFYAGFP 125 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id-----~vi~g~~~~~~-------------~----------~~~~~a~~ia~~lGl~ 125 (461)
...|+..++.+||+++|+++.+++ +|++|+..++. . ....++..++..+|+
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl- 165 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL- 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC-
Confidence 357999999999999999986443 47788876621 0 011256788999999
Q ss_pred CCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccc
Q 012522 126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168 (461)
Q Consensus 126 ~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s 168 (461)
++|+++++++|+|++.||..|+++|++|++|++||+|+|...
T Consensus 166 -~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~ 207 (254)
T PF00109_consen 166 -RGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPL 207 (254)
T ss_dssp --SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--S
T ss_pred -CCccccccccccccccccchhccccccccccccccccccccc
Confidence 799999999999999999999999999999999999999543
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.9e-10 Score=106.10 Aligned_cols=95 Identities=13% Similarity=0.128 Sum_probs=78.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe-CCCCchHHHHHHHHHHHH
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NRQCSSGLQAVADVATAI 151 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~CaSgl~Al~~A~~~I 151 (461)
...+|+.+|+++||+++|++++||+.||+.++++... |..-..+...|||+..+.-+.+ ..||..|..+|..|....
T Consensus 99 ~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~--PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~ 176 (226)
T PF00195_consen 99 EAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAA--PGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIA 176 (226)
T ss_dssp HHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSEC--S-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCC--CchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHH
Confidence 4578999999999999999999999999999988754 6677788889999776666555 589999999999999999
Q ss_pred HcCCCCEEEEEeeccccc
Q 012522 152 KAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 152 ~sG~~d~vLv~G~E~~s~ 169 (461)
++..-.+||++.+|.+|.
T Consensus 177 ~~~p~a~VLvv~vElcsl 194 (226)
T PF00195_consen 177 RANPGARVLVVCVELCSL 194 (226)
T ss_dssp HHSTT-EEEEEEEEEGGG
T ss_pred hCCccceEEEEEEEeeEE
Confidence 999999999999999885
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.1e-08 Score=98.38 Aligned_cols=230 Identities=21% Similarity=0.296 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHc
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKA 153 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~s 153 (461)
...|..+|++.||++++++++|||.++-|....... .+...+..+++ |.+-+-.+|++...+|.+|+.+|..
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i----~s~f~ar~l~i----Pf~GlygACST~~e~l~laa~~vdg 122 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQII----SSSFAARDLGI----PFLGLYGACSTMMESLALAAMLVDG 122 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCC----HHHHHHHHHT------EEEB--CCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhH----HHHHHHHhcCC----CccchhhHHHHHHHHHHHHHHHHhC
Confidence 356899999999999999999999999988766543 45667777876 7889999999999999999999999
Q ss_pred CCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 012522 154 GLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKF 233 (461)
Q Consensus 154 G~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~ 233 (461)
|.+|.+|++-+-..... | + .|
T Consensus 123 g~a~~vla~tSSH~~tA-----------------------------E-------------------------R-----Qf 143 (329)
T PF07451_consen 123 GFADYVLAATSSHFATA-----------------------------E-------------------------R-----QF 143 (329)
T ss_dssp TS-SEEEEEEEE-CCHH-----------------------------H-------------------------H-----HT
T ss_pred CCcceEEEEeccccchh-----------------------------h-------------------------h-----hc
Confidence 99999998764443320 0 0 11
Q ss_pred ccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCC
Q 012522 234 KDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGL 313 (461)
Q Consensus 234 ~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~ 313 (461)
| .|.+.-. .||....| ..-||+|+||.+....-+...
T Consensus 144 R---~P~EyG~------------------------------Qrp~tAqw----------TVTGaGa~il~~~~~~p~It~ 180 (329)
T PF07451_consen 144 R---FPTEYGG------------------------------QRPPTAQW----------TVTGAGAAILSKEGSGPRITH 180 (329)
T ss_dssp ------GGGT----------------------------------TT--E----------E--EEEEEEEESS--SEEEEE
T ss_pred c---CchhccC------------------------------CCCCcccE----------EEeceEEEEEecCCCCcEEEE
Confidence 1 2222211 12211111 356999999997643100000
Q ss_pred CeeEEEEEeeeeccCCCCCCCcHHH----HHHHHHHHcCCCCCCccEEEecCCChHHH---HHHHHHcCCCC--------
Q 012522 314 PILGVFRSFSAVGVDPSVMGIGPAV----AIPAAVKSAGLQIDDINLFEINEAFASQY---VYCIKKLGLDP-------- 378 (461)
Q Consensus 314 ~~~a~i~g~~~~~~~p~~~~~~~~~----ai~~aL~~AGl~~~DID~~eiheafa~~~---~~~~e~LGl~~-------- 378 (461)
--.++|+.++. .||..|+.++++ .|.+-|+..|.+++|.|++..-|--.+-. .-.+++-|++.
T Consensus 181 ~T~GkVvD~G~--~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvTGDLg~vG~~il~~Ll~~~G~~i~~~~~DCG 258 (329)
T PF07451_consen 181 ATIGKVVDMGI--KDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVTGDLGKVGRKILRDLLKEKGYDISENYNDCG 258 (329)
T ss_dssp EE----B-SS-----TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEESS-HHHHHHHHHHHHHHTT---GGGEEEHH
T ss_pred EEEEEEEEcCC--CCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEecchHHHHHHHHHHHHHHcCCCCccccccCC
Confidence 01122222222 578888876654 46777889999999999999887655422 22334446553
Q ss_pred ------CCcCC-CCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEE
Q 012522 379 ------EKVNV-NGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVIS 422 (461)
Q Consensus 379 ------~~vn~-~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~ 422 (461)
++-++ .||+ -.||+.......++.+|++. .-++.|+.
T Consensus 259 ~~iyd~~~Qdv~aGGS-----GcgCSA~V~~g~ll~~l~~g--~~krvL~v 302 (329)
T PF07451_consen 259 LMIYDPEKQDVHAGGS-----GCGCSAVVLCGYLLPKLRKG--ELKRVLFV 302 (329)
T ss_dssp HCSS-TT-S--TT-EE-----SHHHHHHHHHHCHHHHHHTT--S-SEEEEE
T ss_pred eEeecCCccccccCCC-----CcchHHHHHHHHHHHHHHcC--CceEEEEE
Confidence 22233 2332 23677666677788999987 55665554
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.1e-09 Score=100.79 Aligned_cols=94 Identities=18% Similarity=0.252 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeC-CCCchHHHHHHHHHHHHH
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATAIK 152 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~CaSgl~Al~~A~~~I~ 152 (461)
.+.++..++.++|+++|++|+|||.+|+.+++... .|..+.++..++|+..++..++++ .||++|+.+|..|.++++
T Consensus 83 ae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~p--tPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 83 AEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNP--TPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCc--CCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 45688899999999999999999999987776544 477888999999998778888874 789999999999999999
Q ss_pred cCCCCEEEEEeeccccc
Q 012522 153 AGLYDIGIAAGLESMTV 169 (461)
Q Consensus 153 sG~~d~vLv~G~E~~s~ 169 (461)
.-.-..+||+.+|..|.
T Consensus 161 ~~p~~~ALVVstE~~s~ 177 (290)
T PF08392_consen 161 AHPNSYALVVSTENISA 177 (290)
T ss_pred hCCCcEEEEEEEeeccc
Confidence 98899999999999987
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.8e-07 Score=81.31 Aligned_cols=97 Identities=13% Similarity=0.253 Sum_probs=80.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCC--CCCCeEEeCCCCchHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP--ETVPLRTVNRQCSSGLQAVADV 147 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~--~~~~~~~v~~~CaSgl~Al~~A 147 (461)
.+++...|++.|++.+|++.++++++|+.+++|+-++... .-..+.++...||++ .++..+++..+|-+|..||..|
T Consensus 49 ~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~-sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a 127 (174)
T PF01154_consen 49 PDEDIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDK-SKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNA 127 (174)
T ss_dssp TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBS-SS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccc-cccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHH
Confidence 5788999999999999999999999999999999876655 455788899999993 4466788999999999999999
Q ss_pred HHHHHcCCCC--EEEEEeeccc
Q 012522 148 ATAIKAGLYD--IGIAAGLESM 167 (461)
Q Consensus 148 ~~~I~sG~~d--~vLv~G~E~~ 167 (461)
.++|+++..+ .+||+++|..
T Consensus 128 ~~~v~s~~~~g~~aLVVasDiA 149 (174)
T PF01154_consen 128 VNWVASSPWDGRKALVVASDIA 149 (174)
T ss_dssp HHHHCSTTSTTEEEEEEEEEEE
T ss_pred HHHHhcCCCCCCeEEEEecccc
Confidence 9999998754 9999998873
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=98.23 E-value=9.9e-07 Score=69.83 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=35.5
Q ss_pred EEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccc
Q 012522 131 RTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 131 ~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~ 169 (461)
|+++.+|++++.+|..|..+|++|.++.+|+++.|.++.
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~ 39 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR 39 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc
Confidence 689999999999999999999999999999999999887
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=98.13 E-value=5.7e-06 Score=66.87 Aligned_cols=86 Identities=28% Similarity=0.271 Sum_probs=52.5
Q ss_pred HHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEe
Q 012522 344 VKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISM 423 (461)
Q Consensus 344 L~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~ 423 (461)
|+++|++++|||+|.+|+.+........+.+|++++++..+ ..-+||...++-...+.+++.+- +.+.++..++..
T Consensus 1 L~~~g~~~~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~~--~~~~Gn~~sa~~~~~L~~~~~~g--~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKKILDSIAKRLGIPPERFPDN--LAEYGNTGSASIPINLADALEEG--RIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHHHHHHHHHHHTS-GGGBE-T--HHHH-B-GGGHHHHHHHHHHHTT--SSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHHH--HhccCcchhhhHHHHHHHHHHcC--CCCCCCEEEEEE
Confidence 68999999999999999999998888999999999886543 25578888777444444433311 122344444433
Q ss_pred cccCcceeEEE
Q 012522 424 CIGSGMGAAAV 434 (461)
Q Consensus 424 ~~g~G~g~A~v 434 (461)
. |.|...+.+
T Consensus 77 ~-G~G~~~~~~ 86 (90)
T PF08541_consen 77 F-GAGFSWGAA 86 (90)
T ss_dssp E-ETTTEEEEE
T ss_pred E-EhhheeEEE
Confidence 2 555554333
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=98.08 E-value=3.5e-06 Score=71.99 Aligned_cols=97 Identities=24% Similarity=0.285 Sum_probs=62.2
Q ss_pred eEEEEEeeeeccC---CCC---CCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HHHHHH-HcCCC--CCCcC
Q 012522 316 LGVFRSFSAVGVD---PSV---MGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQ----YVYCIK-KLGLD--PEKVN 382 (461)
Q Consensus 316 ~a~i~g~~~~~~~---p~~---~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~----~~~~~e-~LGl~--~~~vn 382 (461)
++.|.+++..... ... .+.+...+++++|+++|++++|||+++.|-.-... +...++ .++-. ..++.
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence 3677888776643 111 23356789999999999999999999999765542 222222 22222 23455
Q ss_pred CCCCcccccCchhhHHHHHHHHHHHHHHcc
Q 012522 383 VNGGAVALGHPLGATGARCVATLLSEMKRR 412 (461)
Q Consensus 383 ~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~ 412 (461)
++.-+..+||+.+++|+..++.++.+|+.+
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~ 110 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEHG 110 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHHT
T ss_pred eeccccccccccccchHHHHHHHHHHHhcC
Confidence 555567899999999999999999999976
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.58 E-value=1.1e-05 Score=83.29 Aligned_cols=111 Identities=20% Similarity=0.176 Sum_probs=83.1
Q ss_pred eccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCC--------
Q 012522 258 SVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-------- 329 (461)
Q Consensus 258 ~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-------- 329 (461)
++++++++.++++++.+++++.|| +++.+||+..||++++++++++.+ + .++.+.+..-.+.
T Consensus 188 np~a~~~~eI~~~~v~~~~~~~dp---~~r~d~~~~~dg~a~l~~a~~~~~---g----~~tagnas~i~dga~a~~~~~ 257 (392)
T COG0183 188 NPKAGFFDEITPEDVLNSPVVADP---LRRLDCSPTSDGAAALVPAFEEVG---G----TVTAGNASGINDGAAALLLMS 257 (392)
T ss_pred hHhcCCCCceeeEEecCCceecCC---cccCCCCCChhhhcCceeccccCC---c----eEEEecccccccHHHHHHHhh
Confidence 345566677888888888777777 899999999999999999997642 1 2444444211110
Q ss_pred ----CCCCCcHHHHHHHHHHHcCCCCC--CccEEEecCCChHHHHHHHHHcCCCCC
Q 012522 330 ----SVMGIGPAVAIPAAVKSAGLQID--DINLFEINEAFASQYVYCIKKLGLDPE 379 (461)
Q Consensus 330 ----~~~~~~~~~ai~~aL~~AGl~~~--DID~~eiheafa~~~~~~~e~LGl~~~ 379 (461)
..++ ....+..++++.+|+++. ++|+.++|++|+..++..+|+|||++.
T Consensus 258 ~~~~~~~~-l~~~A~~~a~~~aGv~p~~~~~~v~av~~~~~~~~l~~~edlgl~e~ 312 (392)
T COG0183 258 ESKAKELG-LAPLAAIRAYAMAGVDPSIMDGPVAAVHDALTIAGLLALEDLGLAEK 312 (392)
T ss_pred HHHHHHCC-CcHHHHHHHHHHhCCCcccccCCHHHHHHHHHHcCCchhhhcCceec
Confidence 1111 123567789999999998 999999999999999999999999873
|
|
| >KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.39 Score=48.29 Aligned_cols=110 Identities=14% Similarity=0.103 Sum_probs=76.7
Q ss_pred EEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHc---CCCCC
Q 012522 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYA---GFPET 127 (461)
Q Consensus 51 v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~l---Gl~~~ 127 (461)
-+=||-+++.++- .- ..++...|...++.+++++-.|+++.|..+-||+-+-..- .-.+=..+...+ |- ..
T Consensus 41 KytIGLGq~~Mgf--cs--drEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDK-SKSVKt~LMqLF~~sgN-td 114 (462)
T KOG1393|consen 41 KYTIGLGQTQMGF--CS--DREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDK-SKSVKTVLMQLFEESGN-TD 114 (462)
T ss_pred ceEeccCcceecc--cC--chhhhhhhhHHHHHHHHHHhCCChhhcceEEecceecccc-chHHHHHHHHHhhhcCC-Cc
Confidence 4667888887752 11 2345778999999999999999999999999998754322 111222222233 32 45
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCC--CCEEEEEeecc
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGL--YDIGIAAGLES 166 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~--~d~vLv~G~E~ 166 (461)
...++..++|=+|.+||-.|.+.|++.. -..+||+..|.
T Consensus 115 IEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDI 155 (462)
T KOG1393|consen 115 IEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDI 155 (462)
T ss_pred cccccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeE
Confidence 6778888999999999999999999853 23455554443
|
|
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.072 Score=52.15 Aligned_cols=113 Identities=18% Similarity=0.252 Sum_probs=71.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCCC--CcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN----EAFASQYVYCIKKLGLDPE--KVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih----eafa~~~~~~~e~LGl~~~--~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..+++++|+++|++|+|||++.++ -+.++..-+..+.+|+..+ ..|.+| .||++....+.+..+|-
T Consensus 88 f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsG--------MGCsAgliai~lA~~lL 159 (290)
T PF08392_consen 88 FGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSG--------MGCSAGLIAIDLAKDLL 159 (290)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccC--------CcchhhHHHHHHHHHHH
Confidence 478999999999999999999755 3455666778889999864 345443 25666556666666665
Q ss_pred ccCC------------------CCCE-EEEEecccCcceeEEEEEEccc---hhhhhcCCCCCcccccC
Q 012522 411 RRGK------------------DCRF-GVISMCIGSGMGAAAVFERGDC---VDELCNARMVPTHTHLS 457 (461)
Q Consensus 411 ~~~~------------------~~~~-gl~~~~~g~G~g~A~v~~~~~~---~~~~~~~~~~~~~~~~~ 457 (461)
+..| |... -++..|.-.-.+.|++|.+... ...+.-...|++|+--+
T Consensus 160 ~~~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~ 228 (290)
T PF08392_consen 160 QAHPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGAD 228 (290)
T ss_pred HhCCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCC
Confidence 4422 1111 2223333322256777776654 35566777888887433
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.31 Score=46.08 Aligned_cols=92 Identities=10% Similarity=-0.001 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCcc--------------c---------hHHHHHHHHcCCCCCCCe
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR--------------A---------MECRMAAFYAGFPETVPL 130 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~--------------~---------~~a~~ia~~lGl~~~~~~ 130 (461)
...|+.+++.+++++. .++|.+|+++..++.... | .++.+++...+. ..+.
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~~ 107 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGPN 107 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCce
Confidence 4678888888888642 467899999877764200 0 155677777776 6899
Q ss_pred EEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccc
Q 012522 131 RTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSI 172 (461)
Q Consensus 131 ~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~ 172 (461)
.++..+-.|...||..|+..++.| .+.||++.+|.....++
T Consensus 108 tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y 148 (218)
T PF13723_consen 108 TALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPY 148 (218)
T ss_pred EEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhh
Confidence 999999999999999999999999 89999999998776433
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=92.15 E-value=0.9 Score=46.81 Aligned_cols=97 Identities=15% Similarity=0.101 Sum_probs=61.9
Q ss_pred EEEEEeeeeccCC--CCCC-CcHHHHHHHHHHHcCCCCCCccEEEecCCCh-HHHHHHHHHcCCCCCCcCCCCCcccccC
Q 012522 317 GVFRSFSAVGVDP--SVMG-IGPAVAIPAAVKSAGLQIDDINLFEINEAFA-SQYVYCIKKLGLDPEKVNVNGGAVALGH 392 (461)
Q Consensus 317 a~i~g~~~~~~~p--~~~~-~~~~~ai~~aL~~AGl~~~DID~~eiheafa-~~~~~~~e~LGl~~~~vn~~GG~~~~Gh 392 (461)
+.|+|++...... .... .-..++++++|+.+|++++|||.+.+...+. .......+.||+...++. .-+
T Consensus 10 vaIvG~g~t~~~~~~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~~~~~~~la~~lGl~~~~~~-------~~~ 82 (384)
T PRK06158 10 TAIVGAATAGLGEAPGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDDALWGLSVAEYLGIRPRFVD-------GTM 82 (384)
T ss_pred EEEEEeeeccceeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCCCcHHHHHHHcCCCCeeec-------ccc
Confidence 4677777653221 1111 1135799999999999999999886643321 112346688999764421 123
Q ss_pred chhhHHHHHHHHHHHHHHccCCCCCEEEEE
Q 012522 393 PLGATGARCVATLLSEMKRRGKDCRFGVIS 422 (461)
Q Consensus 393 p~gatG~~~~~~~~~~L~~~~~~~~~gl~~ 422 (461)
..++++...+..+...++.. ..++.|+.
T Consensus 83 ~g~~s~~~al~~A~~~I~sG--~~d~vLV~ 110 (384)
T PRK06158 83 IGGSSFLAHLLPAALALEAG--LCDVALIC 110 (384)
T ss_pred CccHHHHHHHHHHHHHHHcC--CCCEEEEe
Confidence 44667777788888888876 67777764
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=91.80 E-value=0.83 Score=48.62 Aligned_cols=67 Identities=18% Similarity=0.233 Sum_probs=45.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCC--CCcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN----EAFASQYVYCIKKLGLDP--EKVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih----eafa~~~~~~~e~LGl~~--~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..|++++|+++|++++|||++..+ ..++....+..+.+|+.. ..+|.+| .||+|...-+.+..++-
T Consensus 181 ~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsg--------mGCSggl~aLdlA~~lL 252 (511)
T PLN02192 181 FGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGG--------MGCSAGLISIDLAKHLL 252 (511)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEccc--------chhhhHHHHHHHHHHHH
Confidence 478999999999999999998754 335667778889999873 2345543 24555444444444444
Q ss_pred c
Q 012522 411 R 411 (461)
Q Consensus 411 ~ 411 (461)
+
T Consensus 253 ~ 253 (511)
T PLN02192 253 Q 253 (511)
T ss_pred H
Confidence 3
|
|
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=91.27 E-value=0.32 Score=38.83 Aligned_cols=73 Identities=19% Similarity=0.182 Sum_probs=43.3
Q ss_pred HHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHH--HHHcCCCCEE
Q 012522 86 IEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVAT--AIKAGLYDIG 159 (461)
Q Consensus 86 L~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~--~I~sG~~d~v 159 (461)
|+++|++++|||.++.-+. ....-..++..+|+|......++ +.+|++-..+|..+.. .|+ .-|.+
T Consensus 1 L~~~g~~~~did~~i~hq~------~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~--~Gd~v 72 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQA------SKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIK--PGDRV 72 (90)
T ss_dssp HHHTT--GGGESEEEE-SS------SHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSC--TTEEE
T ss_pred CccccCCHHHCCEEEeCCC------CHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCC--CCCEE
Confidence 6889999999999997442 23344557789999754333222 4556666666666555 333 34678
Q ss_pred EEEeecc
Q 012522 160 IAAGLES 166 (461)
Q Consensus 160 Lv~G~E~ 166 (461)
|++++-.
T Consensus 73 l~~~~G~ 79 (90)
T PF08541_consen 73 LLVGFGA 79 (90)
T ss_dssp EEEEEET
T ss_pred EEEEEEh
Confidence 8877543
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=91.08 E-value=2.2 Score=40.57 Aligned_cols=93 Identities=18% Similarity=0.164 Sum_probs=57.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCCcccccCchhh-HHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA-----FASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGA-TGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea-----fa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~ga-tG~~~~~~~~~~L~ 410 (461)
..+++++|+++|++++|||.+.+... +....-...+.+|+...+. ..+- .++ +++..+..+...|+
T Consensus 12 ~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~~~~~------~~i~--~~C~s~~~al~~A~~~i~ 83 (254)
T cd00327 12 FEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGPA------YSVN--QACATGLTALALAVQQVQ 83 (254)
T ss_pred HHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCCCCCc------ceec--cHhHHHHHHHHHHHHHHH
Confidence 57899999999999999999975533 3344456778888853221 1111 233 44445555556666
Q ss_pred ccCCCCCEEEEEec--cc-CcceeEEEEEEcc
Q 012522 411 RRGKDCRFGVISMC--IG-SGMGAAAVFERGD 439 (461)
Q Consensus 411 ~~~~~~~~gl~~~~--~g-~G~g~A~v~~~~~ 439 (461)
.. ..+++|+..+ .- +..+.|+||++++
T Consensus 84 ~g--~~~~~lv~~~e~~~~gdGAaa~vL~~~~ 113 (254)
T cd00327 84 NG--KADIVLAGGSEEFVFGDGAAAAVVESEE 113 (254)
T ss_pred CC--CCCEEEEEecceeeecceEEEEEECcHH
Confidence 55 4667666543 11 2235677888765
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=90.41 E-value=0.87 Score=48.14 Aligned_cols=66 Identities=17% Similarity=0.298 Sum_probs=47.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCC--CCcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN----EAFASQYVYCIKKLGLDP--EKVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih----eafa~~~~~~~e~LGl~~--~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..|++++|+++|++++|||++.++ +.++.......++||+.+ ..+|.+| .||+|...-+.+..++-
T Consensus 153 ~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~g--------mGCSggl~aL~lA~~ll 224 (478)
T PLN02932 153 IGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGG--------MGCSAGVIAIDAAKSLL 224 (478)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEecc--------chhhhHHHHHHHHHHHH
Confidence 479999999999999999999643 567788888999999963 2455543 24555444444444444
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=89.93 E-value=1.2 Score=46.12 Aligned_cols=68 Identities=22% Similarity=0.280 Sum_probs=45.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINE----AFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihe----afa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..|++++|+++|++++|||++...- .++.......+.||+...-. .++-.-.||+|..........+-
T Consensus 111 ~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~------~~~d~~~gC~g~~~aL~~A~~~~ 182 (391)
T PLN03169 111 VEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQ------RVMLYFLGCSGGVAGLRVAKDIA 182 (391)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcce------eeecccChhHHHHHHHHHHHHHH
Confidence 4799999999999999999875433 35666778889999976320 11223346666555444444443
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=89.84 E-value=2.1 Score=44.11 Aligned_cols=97 Identities=19% Similarity=0.160 Sum_probs=59.7
Q ss_pred EEEEEeeeecc-C--CCCCC-CcHHHHHHHHHHHcCCCCCCccEEEec---CCCh---HHHHHHHHHcCCCCCCcCCCCC
Q 012522 317 GVFRSFSAVGV-D--PSVMG-IGPAVAIPAAVKSAGLQIDDINLFEIN---EAFA---SQYVYCIKKLGLDPEKVNVNGG 386 (461)
Q Consensus 317 a~i~g~~~~~~-~--p~~~~-~~~~~ai~~aL~~AGl~~~DID~~eih---eafa---~~~~~~~e~LGl~~~~vn~~GG 386 (461)
+.|+|++.... . +.... .-...+++++|+.+||+++|||.+.+. +.|. .......+.||+...+..
T Consensus 5 v~IvG~g~t~~~~~~~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~~~~~~---- 80 (386)
T PRK08313 5 AAVLGTGQTKYVAKRQDVSMAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGATGKPLI---- 80 (386)
T ss_pred EEEEEeecCCcCccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCCCCceE----
Confidence 35777766433 1 11111 123589999999999999999988764 2221 112456688999654421
Q ss_pred cccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEE
Q 012522 387 AVALGHPLGATGARCVATLLSEMKRRGKDCRFGVIS 422 (461)
Q Consensus 387 ~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~ 422 (461)
.+ +..+++|...+..+...++.. ..+++|+.
T Consensus 81 --~v-~~~casg~~al~~A~~~I~sG--~~~~vLVv 111 (386)
T PRK08313 81 --RV-HTAGSVGGSTAVVAASLVQSG--VYRRVLAV 111 (386)
T ss_pred --EE-eccCHHHHHHHHHHHHHHHCC--CCCEEEEE
Confidence 11 223456776777888888876 56776664
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=89.37 E-value=1.8 Score=43.16 Aligned_cols=64 Identities=19% Similarity=0.241 Sum_probs=43.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINE----AFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR 412 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihe----afa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~ 412 (461)
..|++++|+++|++++|||++-..+ .++.. +.++.||++... +.|. -+|++..+..+...++..
T Consensus 59 ~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ipss--fvar~LGIP~~g--V~gA--------CSTg~eAL~lAa~~VaSG 126 (334)
T PRK12404 59 EEACSRAIEKAKLRKEDIQFFLAGDLMNQITPTS--FAARTLGIPYLG--LFGA--------CSTSMEGLALAALIVNSG 126 (334)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcHH--HHHHHhCCCccc--eeec--------CHHHHHHHHHHHHHHHcC
Confidence 5799999999999999999998644 44443 778999976533 2221 144454555555555554
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=89.36 E-value=1.3 Score=45.75 Aligned_cols=43 Identities=28% Similarity=0.237 Sum_probs=35.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN----EAFASQYVYCIKKLGLDPE 379 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih----eafa~~~~~~~e~LGl~~~ 379 (461)
..|++++|+++|++++|||++... ..++.......+.||+...
T Consensus 106 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~ 152 (389)
T PLN03168 106 AEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPT 152 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCc
Confidence 479999999999999999999644 3356677788899999764
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=89.24 E-value=2.9 Score=43.78 Aligned_cols=77 Identities=22% Similarity=0.169 Sum_probs=54.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC---CCh---HHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINE---AFA---SQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihe---afa---~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..+++++|+++||+++|||.+.... .+. .......+.||+...+... -+..++||+..+..+...++
T Consensus 42 ~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~~~~~~-------v~~~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 42 KKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVPKPSKR-------IEGGGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCCCceEE-------EeCCcHHHHHHHHHHHHHHH
Confidence 5789999999999999999876532 121 1223346889997755211 13357889888999999998
Q ss_pred ccCCCCCEEEEE
Q 012522 411 RRGKDCRFGVIS 422 (461)
Q Consensus 411 ~~~~~~~~gl~~ 422 (461)
.. ..+++|+.
T Consensus 115 sG--~~~~vLv~ 124 (430)
T PRK06365 115 SG--RMDCVAVY 124 (430)
T ss_pred cC--CCCEEEEE
Confidence 77 56776654
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=89.21 E-value=1.5 Score=45.22 Aligned_cols=43 Identities=21% Similarity=0.144 Sum_probs=35.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN----EAFASQYVYCIKKLGLDPE 379 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih----eafa~~~~~~~e~LGl~~~ 379 (461)
..|++++|+++|++++|||++... ..++.......+.||+...
T Consensus 107 ~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~ 153 (391)
T PLN03173 107 KEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSS 153 (391)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCcc
Confidence 478999999999999999987533 2367777888999999764
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=88.92 E-value=1.4 Score=45.67 Aligned_cols=70 Identities=17% Similarity=0.139 Sum_probs=47.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN----EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR 412 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih----eafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~ 412 (461)
..|++++|+++|++++|||++... ..++....+..+.||+.+.-. ..+-.-.||+|...-......+-+.
T Consensus 111 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~------r~~d~~~gC~G~~~aL~~A~~l~~~ 184 (401)
T PLN03170 111 KAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVN------RLMMYQQGCFAGGTVLRVAKDLAEN 184 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccH------HHHhhcChhHHHHHHHHHHHHHHHc
Confidence 478999999999999999987522 236677888899999976420 1222334666665555555555443
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=88.80 E-value=2.8 Score=43.21 Aligned_cols=99 Identities=15% Similarity=0.078 Sum_probs=62.2
Q ss_pred EEEEEeeeeccCCC--CCCC-cHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCc
Q 012522 317 GVFRSFSAVGVDPS--VMGI-GPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHP 393 (461)
Q Consensus 317 a~i~g~~~~~~~p~--~~~~-~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp 393 (461)
+.|+|.+....... .... -..++++++|+.+||+++|||.+.++...........+.||+...+. ...-+.
T Consensus 6 v~IvG~g~t~~~r~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~l~~~lGl~~~~~------~~~v~~ 79 (386)
T PRK07855 6 AAIVGIGATEFSKNSGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMDTNPEIAVARALGIGELKF------FSRIHY 79 (386)
T ss_pred EEEEEeeecccccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCccccHHHHHHHCCCCCCcc------eeeecC
Confidence 36777766432211 1111 12579999999999999999987653211111244678899976221 011134
Q ss_pred hhhHHHHHHHHHHHHHHccCCCCCEEEEEe
Q 012522 394 LGATGARCVATLLSEMKRRGKDCRFGVISM 423 (461)
Q Consensus 394 ~gatG~~~~~~~~~~L~~~~~~~~~gl~~~ 423 (461)
.|+||...+.++...++.. ..++.|+..
T Consensus 80 gg~sg~~~~~~A~~~I~sG--~~d~vLv~g 107 (386)
T PRK07855 80 GGGAACATVQQAAMAVATG--VADVVVCYR 107 (386)
T ss_pred CcHHHHHHHHHHHHHHHCC--CCCEEEEEe
Confidence 5788888888898999887 678777643
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=88.79 E-value=1.5 Score=43.93 Aligned_cols=41 Identities=22% Similarity=0.354 Sum_probs=31.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC--hHHHHHHHHHcCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAF--ASQYVYCIKKLGLD 377 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheaf--a~~~~~~~e~LGl~ 377 (461)
.+|++++|+++|++++|||++...+.. .....+.++.||++
T Consensus 61 ~eAa~~ALekAGI~~~DID~lI~Gdll~Q~~sAs~vA~~LGIP 103 (337)
T PRK08304 61 EDAIQQALQKANLKKSDIDYLLAGDLLNQIISANFAARELGIP 103 (337)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCcchHHHHHHHhCCc
Confidence 589999999999999999999754332 22344667888874
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=88.53 E-value=1.1 Score=45.53 Aligned_cols=84 Identities=18% Similarity=0.141 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeE-----Ee-CCCCchHHHHHHHH
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR-----TV-NRQCSSGLQAVADV 147 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~-----~v-~~~CaSgl~Al~~A 147 (461)
....+..+++++|+++|++++|||.+++=+. ....-..+...+|+|.+.-.. .+ |.+++|-..+|..+
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~------~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~ 279 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQP------NGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAV 279 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCC------ChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHH
Confidence 3455568889999999999999998887222 122444578889997433222 22 45566777777777
Q ss_pred HHHHHcCCCCEEEEEeec
Q 012522 148 ATAIKAGLYDIGIAAGLE 165 (461)
Q Consensus 148 ~~~I~sG~~d~vLv~G~E 165 (461)
...++.|+ .+|++|+-
T Consensus 280 ~~~~~~Gd--~vll~~~G 295 (345)
T TIGR00748 280 LDIAEPGD--RILAVSYG 295 (345)
T ss_pred HHhcCCCC--EEEEEEec
Confidence 66666664 67777653
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=88.37 E-value=1.9 Score=43.18 Aligned_cols=43 Identities=26% Similarity=0.315 Sum_probs=33.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----C-CChHHHHHHHHHcCCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN----E-AFASQYVYCIKKLGLDPE 379 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih----e-afa~~~~~~~e~LGl~~~ 379 (461)
..|++++|+++|++++|||++... | ..+....+..++||+...
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~~~ 104 (326)
T PRK05963 57 ASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQNS 104 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCCCC
Confidence 589999999999999999999752 2 234455678899998653
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=88.22 E-value=2 Score=44.37 Aligned_cols=43 Identities=23% Similarity=0.201 Sum_probs=35.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEE----ecCCChHHHHHHHHHcCCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFE----INEAFASQYVYCIKKLGLDPE 379 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~e----iheafa~~~~~~~e~LGl~~~ 379 (461)
..|++++|+++|++++|||++. ....++.......+.||+...
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~ 153 (393)
T PLN03172 107 KEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPS 153 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCC
Confidence 4789999999999999999875 223477788889999999764
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=88.18 E-value=2 Score=44.51 Aligned_cols=69 Identities=20% Similarity=0.225 Sum_probs=46.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEe----cCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEI----NEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~ei----heafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
..|++++|+++|++++|||++.. .+.++.......+.||+....-- ..+ .-.||+|...-..+...+-.
T Consensus 113 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~-----~~~-~~~gC~g~~~aL~~A~~li~ 185 (399)
T PLN03171 113 AEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRR-----TML-HLNGCFAGAAALRLAKDLAE 185 (399)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccce-----eec-cCCccHHHHHHHHHHHHHHH
Confidence 47999999999999999999974 34467777888899998754200 011 11267766655555544443
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=88.07 E-value=1.8 Score=43.22 Aligned_cols=66 Identities=20% Similarity=0.224 Sum_probs=42.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC--hHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAF--ASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR 412 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheaf--a~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~ 412 (461)
..|++++|+++|++++|||++..-+.. .....+..+.||++...|+ + ..+|++..+..+...++..
T Consensus 55 ~eAa~~ALekAGL~~~DID~IIvGdl~~Q~~~As~vA~~LGIP~fdV~--~--------ACSTf~~AL~lAa~lI~SG 122 (327)
T TIGR02845 55 EDAVNLALKKANLKKDDVDFFLAGDLLNQIITANFVARDLGIPFLGLY--G--------ACSTSMETLALGAMLVDGG 122 (327)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeCCCCcccHHHHHHHHhCCCEEEEe--c--------cCHHHHHHHHHHHHHHhCC
Confidence 579999999999999999999765432 1234466788997442222 1 1244455555555555554
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.06 E-value=3.3 Score=42.71 Aligned_cols=97 Identities=15% Similarity=0.113 Sum_probs=62.1
Q ss_pred EEEEEeeeeccCC--CCCC-CcHHHHHHHHHHHcCCCCCCccEEEec-CCChHHHHHHHHHcCCCCCCcCCCCCcccccC
Q 012522 317 GVFRSFSAVGVDP--SVMG-IGPAVAIPAAVKSAGLQIDDINLFEIN-EAFASQYVYCIKKLGLDPEKVNVNGGAVALGH 392 (461)
Q Consensus 317 a~i~g~~~~~~~p--~~~~-~~~~~ai~~aL~~AGl~~~DID~~eih-eafa~~~~~~~e~LGl~~~~vn~~GG~~~~Gh 392 (461)
+.|+|.+...... .... .-...+++++|+.+||+++|||.+..+ +..........+.||+...++. ..+
T Consensus 7 vaIvG~g~t~~~~~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~lGl~~~~~~-------~v~ 79 (388)
T PRK08142 7 AYIVGAYEHPTRKAPDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPGLGPASMVDYLGLKLRHVD-------STE 79 (388)
T ss_pred EEEEEEeeccceeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCccHHHHHHhCCCCCeeec-------ccc
Confidence 4677777653221 1111 123589999999999999999987542 2111112346789999654421 234
Q ss_pred chhhHHHHHHHHHHHHHHccCCCCCEEEEE
Q 012522 393 PLGATGARCVATLLSEMKRRGKDCRFGVIS 422 (461)
Q Consensus 393 p~gatG~~~~~~~~~~L~~~~~~~~~gl~~ 422 (461)
..|++|...+.++...++.. ..++.|+.
T Consensus 80 ~gg~s~~~a~~~A~~~I~sG--~~d~vLvv 107 (388)
T PRK08142 80 TGGSSYLAHVGHAAQAIAAG--KCSVALIT 107 (388)
T ss_pred CCcHHHHHHHHHHHHHHHcC--CCCEEEEE
Confidence 45788888888888889877 66777764
|
|
| >PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=87.59 E-value=3.1 Score=36.94 Aligned_cols=102 Identities=17% Similarity=0.219 Sum_probs=64.2
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCC-cccccCchhhHHHHHHHHHHHHH-Hcc
Q 012522 335 GPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGG-AVALGHPLGATGARCVATLLSEM-KRR 412 (461)
Q Consensus 335 ~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG-~~~~Ghp~gatG~~~~~~~~~~L-~~~ 412 (461)
.....+.++|++.|++..|+++|.+|-.-....-...+.|+|+++++-.+=- +-.+||-..+|-+.-+-++..+- +..
T Consensus 41 ~i~~~~~~~L~~~g~~~~~~~~wavHPGG~~ILd~v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g 120 (151)
T PF02797_consen 41 NIPPFVEDLLARHGLSDWDILFWAVHPGGRKILDAVEEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEG 120 (151)
T ss_dssp HHHHHHHHHHHGGTCCSGGGSEEEEE-SSHHHHHHHHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhhcccccccceeeecCChHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhc
Confidence 3456788999999999778889999999998888999999999876532211 23478888887554444433321 111
Q ss_pred ----CCCCCEEEEEecccCccee-EEEEEE
Q 012522 413 ----GKDCRFGVISMCIGSGMGA-AAVFER 437 (461)
Q Consensus 413 ----~~~~~~gl~~~~~g~G~g~-A~v~~~ 437 (461)
.++.+.++..+ .|-|+.. .++|++
T Consensus 121 ~~~~~~g~~~gv~~a-fGPG~t~E~~lLr~ 149 (151)
T PF02797_consen 121 APPPGEGGEWGVMLA-FGPGLTIEGMLLRS 149 (151)
T ss_dssp TSBTTTTBSEEEEEE-EETTTEEEEEEEEE
T ss_pred ccCCCCCCCeEEEEE-ECCcceEeeEEEee
Confidence 12346777765 3666665 455544
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A .... |
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=87.48 E-value=2.1 Score=42.86 Aligned_cols=68 Identities=24% Similarity=0.333 Sum_probs=51.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEe-----cCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEI-----NEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~ei-----heafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
..|++++|+++|++++|||++.+ ...|+.......+.||+.... ++==...|+|..--..+..++-+
T Consensus 57 ~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~~~~--------afDl~aaCsgf~yaL~~A~~~i~ 128 (323)
T COG0332 57 VEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGGAP--------AFDLQAACSGFLYALSVADGLIR 128 (323)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCCCcc--------eeechhhhHHHHHHHHHHHHHHH
Confidence 58999999999999999999973 355788888889999997632 23234467887776666666655
Q ss_pred c
Q 012522 412 R 412 (461)
Q Consensus 412 ~ 412 (461)
.
T Consensus 129 s 129 (323)
T COG0332 129 S 129 (323)
T ss_pred c
Confidence 4
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=87.18 E-value=3.2 Score=44.35 Aligned_cols=68 Identities=16% Similarity=0.294 Sum_probs=46.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCCC--CcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN----EAFASQYVYCIKKLGLDPE--KVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih----eafa~~~~~~~e~LGl~~~--~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
-.+++++|+++|++++|||++.++ ..++....+..++||+... .+|.+| .||+|...-+.+..++-
T Consensus 193 ~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsg--------mGCSggl~aL~lA~~lL 264 (521)
T PLN02854 193 FGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGG--------MGCSAGLISIDLANDLL 264 (521)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEeccc--------chhhhHHHHHHHHHHHH
Confidence 368899999999999999999864 2355677788899998642 344432 25666555555555444
Q ss_pred cc
Q 012522 411 RR 412 (461)
Q Consensus 411 ~~ 412 (461)
+.
T Consensus 265 ~~ 266 (521)
T PLN02854 265 KA 266 (521)
T ss_pred Hh
Confidence 33
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=87.16 E-value=2.6 Score=43.22 Aligned_cols=82 Identities=15% Similarity=0.098 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHc-----CCCCCCCeEEe----CCCCchHHHHHHHHH
Q 012522 78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYA-----GFPETVPLRTV----NRQCSSGLQAVADVA 148 (461)
Q Consensus 78 ~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~l-----Gl~~~~~~~~v----~~~CaSgl~Al~~A~ 148 (461)
...+++++|+++|++++|||.++.=+. ....-..++..+ |+|...-..++ |.+|+|-..+|..+.
T Consensus 274 ~~~~i~~~L~~~gl~~~DId~~v~Hq~------n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~a~ 347 (378)
T PRK06816 274 TIKPLLELVDKRNLDPDDIDYFLPHYS------SEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDELL 347 (378)
T ss_pred HHHHHHHHHHHcCCChhhCCEEeeCcc------cHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHHHH
Confidence 367788899999999999998886332 122334455555 88754434444 345555556665553
Q ss_pred H--HHHcCCCCEEEEEeeccc
Q 012522 149 T--AIKAGLYDIGIAAGLESM 167 (461)
Q Consensus 149 ~--~I~sG~~d~vLv~G~E~~ 167 (461)
. .|+.| |.+++.+.|+-
T Consensus 348 ~~g~~~~G--d~vl~~~~~s~ 366 (378)
T PRK06816 348 NSGRLKPG--QKILCFVPESG 366 (378)
T ss_pred HcCCCCCC--CEEEEEEeccc
Confidence 3 23333 67888777663
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=86.52 E-value=2.7 Score=44.73 Aligned_cols=66 Identities=18% Similarity=0.273 Sum_probs=45.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCC--CCcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN----EAFASQYVYCIKKLGLDP--EKVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih----eafa~~~~~~~e~LGl~~--~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..|++++|+++|++++|||++.++ ..++....+..++||+.+ ..+|.+| .||+|...-+.+..+|-
T Consensus 177 ~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~g--------mGCsggl~aL~lA~~ll 248 (502)
T PLN02377 177 FGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG--------MGCSAGVIAVDLAKDML 248 (502)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEeccc--------chhhHHHHHHHHHHHHH
Confidence 478999999999999999999763 235667778889999974 2455543 24555444444444444
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.38 E-value=4.2 Score=42.05 Aligned_cols=97 Identities=19% Similarity=0.075 Sum_probs=60.5
Q ss_pred EEEEEeeeeccCCC--CC-CCcHHHHHHHHHHHcCCCCCCccEEEec---CCC---hHHHHHHHHHcCCCCCCcCCCCCc
Q 012522 317 GVFRSFSAVGVDPS--VM-GIGPAVAIPAAVKSAGLQIDDINLFEIN---EAF---ASQYVYCIKKLGLDPEKVNVNGGA 387 (461)
Q Consensus 317 a~i~g~~~~~~~p~--~~-~~~~~~ai~~aL~~AGl~~~DID~~eih---eaf---a~~~~~~~e~LGl~~~~vn~~GG~ 387 (461)
+.|+|++....... .. ..-...+++++|+++|++++|||.+.+. +.+ ........+.||+...+..
T Consensus 11 vaIvG~g~t~~~~~~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~~~~~----- 85 (392)
T PRK06065 11 VAVIGAGLTLFRRRLLETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIRKPVS----- 85 (392)
T ss_pred eEEEEecccCCcCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCCCCeE-----
Confidence 35777766542221 11 1113579999999999999999988654 222 1122345577777654321
Q ss_pred ccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEE
Q 012522 388 VALGHPLGATGARCVATLLSEMKRRGKDCRFGVIS 422 (461)
Q Consensus 388 ~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~ 422 (461)
.+ +..++||...+..+...++.. ..++.|+.
T Consensus 86 -~V-~~~gasG~~al~~A~~~I~sG--~ad~vLVv 116 (392)
T PRK06065 86 -RV-YVGGATGVMTAIAGWYHVASG--LCQKVLAV 116 (392)
T ss_pred -EE-ecCchhHHHHHHHHHHHHhCC--CCCEEEEE
Confidence 11 234688888888888888876 56776654
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=86.35 E-value=1.4 Score=41.77 Aligned_cols=43 Identities=28% Similarity=0.330 Sum_probs=32.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA----FASQYVYCIKKLGLDPE 379 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea----fa~~~~~~~e~LGl~~~ 379 (461)
.+|++++|+++|++++||+++..--+ .+.......+.|||.+.
T Consensus 105 ~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~ 151 (226)
T PF00195_consen 105 EEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPD 151 (226)
T ss_dssp HHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TT
T ss_pred HHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCC
Confidence 47899999999999999999985543 34577788999999874
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=85.61 E-value=2.9 Score=43.31 Aligned_cols=77 Identities=16% Similarity=0.116 Sum_probs=53.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAF-----ASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheaf-----a~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
..+++++|+++||+++|||.+.+-..+ ........+.+|++..+.. .=+-.++||+..+..+...++.
T Consensus 32 ~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~~~~~-------~v~~~c~sg~~ai~~A~~~I~s 104 (398)
T PRK06157 32 VEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPNIPVT-------RVENFCATGSEAFRGAVYAVAS 104 (398)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCCCCCEE-------EEecccHHHHHHHHHHHHHHHC
Confidence 589999999999999999987553211 1122456678999753321 1134578898889999999987
Q ss_pred cCCCCCEEEEE
Q 012522 412 RGKDCRFGVIS 422 (461)
Q Consensus 412 ~~~~~~~gl~~ 422 (461)
. ..++.|+.
T Consensus 105 G--~~d~vlv~ 113 (398)
T PRK06157 105 G--AYDIALAL 113 (398)
T ss_pred C--CCCEEEEE
Confidence 6 56666654
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=85.39 E-value=3.9 Score=42.33 Aligned_cols=77 Identities=19% Similarity=0.261 Sum_probs=52.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----C--hHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA----F--ASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea----f--a~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..+++++|+++||+++|||.+..... + ........+.||+...+... + +...+||...+..+...++
T Consensus 28 ~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~~~~~~------v-~~~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 28 VVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWNGAPVSS------S-YAACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCCCCceec------c-cchhHHHHHHHHHHHHHHH
Confidence 57899999999999999999864311 1 12224566888986544211 1 3345677778888888888
Q ss_pred ccCCCCCEEEEE
Q 012522 411 RRGKDCRFGVIS 422 (461)
Q Consensus 411 ~~~~~~~~gl~~ 422 (461)
.. ..++.|+.
T Consensus 101 sG--~~~~vLvv 110 (399)
T PRK06059 101 AG--LCDVALVV 110 (399)
T ss_pred CC--CCCEEEEE
Confidence 76 56666664
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=85.22 E-value=1.8 Score=43.40 Aligned_cols=83 Identities=20% Similarity=0.162 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHHH-
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATA- 150 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~~- 150 (461)
+...++++++|+++|++++|||.+++-.. +...-..+...+|+|...-..++ |.+++|-..+|..+...
T Consensus 239 ~~~~~~~~~~L~~~g~~~~did~~i~H~~------~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~~~~g 312 (338)
T PRK09258 239 ELAVDTWEAFLAQLGWAVEQVDRVICHQV------GAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMAAEEG 312 (338)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecCCC------CHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHHHHhC
Confidence 44556788999999999999998886321 23345577889999754433333 23334444455444332
Q ss_pred -HHcCCCCEEEEEeecc
Q 012522 151 -IKAGLYDIGIAAGLES 166 (461)
Q Consensus 151 -I~sG~~d~vLv~G~E~ 166 (461)
++.| |.+|++++..
T Consensus 313 ~~~~G--d~vll~~~G~ 327 (338)
T PRK09258 313 FLKPG--DRVALLGIGS 327 (338)
T ss_pred CCCCC--CEEEEEEech
Confidence 3333 7788877644
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=84.21 E-value=4.2 Score=41.89 Aligned_cols=75 Identities=17% Similarity=0.205 Sum_probs=49.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCC-CC-cCCCCCcccccCchhhHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAF-----ASQYVYCIKKLGLDP-EK-VNVNGGAVALGHPLGATGARCVATLLSEM 409 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheaf-----a~~~~~~~e~LGl~~-~~-vn~~GG~~~~Ghp~gatG~~~~~~~~~~L 409 (461)
..+++++|+++|++++|||.+.+...+ ........+.||+.. .+ .++ +..+++|+..+..+...+
T Consensus 27 ~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v--------~~~c~s~~~al~~A~~~I 98 (386)
T cd00751 27 AAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTV--------NRVCGSGLQAVALAAQSI 98 (386)
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhh--------ccccHHHHHHHHHHHHHH
Confidence 579999999999999999988653221 222334567889865 32 222 223456666677777777
Q ss_pred HccCCCCCEEEE
Q 012522 410 KRRGKDCRFGVI 421 (461)
Q Consensus 410 ~~~~~~~~~gl~ 421 (461)
+.. ..+++|+
T Consensus 99 ~sG--~~~~vLv 108 (386)
T cd00751 99 AAG--EADVVVA 108 (386)
T ss_pred HCC--CCCeEEE
Confidence 765 5666665
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.90 E-value=3.6 Score=42.29 Aligned_cols=76 Identities=18% Similarity=0.162 Sum_probs=53.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCh-----HHHHHHHHHcCCCCCCc-CCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAFA-----SQYVYCIKKLGLDPEKV-NVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheafa-----~~~~~~~e~LGl~~~~v-n~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..+++++|+++||+++|||.+.+-.... .......+.||+...+. .+ +..+++|+..+..+...++
T Consensus 26 ~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~~~~v--------~~~casg~~al~~A~~~I~ 97 (385)
T PRK12578 26 WESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTGKVPLRV--------EAMCATGLAASLTAYTAVA 97 (385)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCCCCeeEE--------eccCHHHHHHHHHHHHHHH
Confidence 5799999999999999999987543221 12344668889876432 22 2345778888888888888
Q ss_pred ccCCCCCEEEEE
Q 012522 411 RRGKDCRFGVIS 422 (461)
Q Consensus 411 ~~~~~~~~gl~~ 422 (461)
.. ..+++|+.
T Consensus 98 sG--~~~~vLvv 107 (385)
T PRK12578 98 SG--LVDMAIAV 107 (385)
T ss_pred CC--CCCEEEEE
Confidence 76 56766654
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=83.54 E-value=3.9 Score=40.88 Aligned_cols=81 Identities=12% Similarity=0.046 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHH-HHHHHHHHHcCC-
Q 012522 78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQA-VADVATAIKAGL- 155 (461)
Q Consensus 78 ~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~A-l~~A~~~I~sG~- 155 (461)
...+++++|+++|++++|||.++.=+. +...-..+...+|+|.+.-..++..-..++... +..-...+++|.
T Consensus 232 ~~~~i~~~L~~~gl~~~did~~~~H~~------~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~~ 305 (329)
T PRK07204 232 LMKFIDKLLMDAGYTLADIDLIVPHQA------SGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEAIKQKKV 305 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCCC------CHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHHHHcCCC
Confidence 557889999999999999998886322 233455778899997544333333222222222 222233455554
Q ss_pred --CCEEEEEee
Q 012522 156 --YDIGIAAGL 164 (461)
Q Consensus 156 --~d~vLv~G~ 164 (461)
-|.+|++++
T Consensus 306 ~~Gd~vll~~~ 316 (329)
T PRK07204 306 QRGNKILLLGT 316 (329)
T ss_pred CCCCEEEEEEE
Confidence 367777654
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=83.48 E-value=11 Score=37.44 Aligned_cols=79 Identities=15% Similarity=0.107 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCC---CCCCCeEEe-CCCCchHHHHHHHHHHH
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF---PETVPLRTV-NRQCSSGLQAVADVATA 150 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl---~~~~~~~~v-~~~CaSgl~Al~~A~~~ 150 (461)
.+...++++++|+++|++++|||.++.-....... ............+. +.......+ +..++++...|..+...
T Consensus 204 ~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~ 282 (332)
T cd00825 204 AEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIG-DVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLM 282 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCC-CHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHH
Confidence 45566899999999999999999888754332222 11111222222221 000111122 45677888888888888
Q ss_pred HHcC
Q 012522 151 IKAG 154 (461)
Q Consensus 151 I~sG 154 (461)
.+.+
T Consensus 283 ~~~~ 286 (332)
T cd00825 283 LEHG 286 (332)
T ss_pred HhcC
Confidence 8887
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=82.84 E-value=5.1 Score=41.29 Aligned_cols=75 Identities=15% Similarity=0.081 Sum_probs=49.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCC-CC-cCCCCCcccccCchhhHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAF-----ASQYVYCIKKLGLDP-EK-VNVNGGAVALGHPLGATGARCVATLLSEM 409 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheaf-----a~~~~~~~e~LGl~~-~~-vn~~GG~~~~Ghp~gatG~~~~~~~~~~L 409 (461)
..+++++|+++|++++|||.+.+...+ ..........+|+.. .+ .++ +..+++|+..+..+...+
T Consensus 26 ~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v--------~~~Casg~~al~~A~~~I 97 (386)
T TIGR01930 26 AAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTV--------NRQCASGLQAVILAAQLI 97 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeee--------cchhhHHHHHHHHHHHHH
Confidence 589999999999999999998754321 222334567788874 33 122 233566777777777777
Q ss_pred HccCCCCCEEEE
Q 012522 410 KRRGKDCRFGVI 421 (461)
Q Consensus 410 ~~~~~~~~~gl~ 421 (461)
+.. ..+++|+
T Consensus 98 ~sG--~~~~vLv 107 (386)
T TIGR01930 98 RAG--EADVVVA 107 (386)
T ss_pred HCC--CCCEEEE
Confidence 765 5566665
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=82.74 E-value=4.9 Score=41.01 Aligned_cols=77 Identities=22% Similarity=0.230 Sum_probs=52.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCh-----HHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAFA-----SQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheafa-----~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
..+++++|+++|++++|||.+.+...+. .......+.||++..+.. .+ +..++||+..+..+...++.
T Consensus 21 ~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~~~~~~------~v-~~~c~sg~~al~~Aa~~I~s 93 (375)
T cd00829 21 AEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGKPAT------RV-EAAGASGSAAVRAAAAAIAS 93 (375)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCCCccee------eE-eCccHHHHHHHHHHHHHHHh
Confidence 5789999999999999999887543322 234456788898643321 11 23457777777777777776
Q ss_pred cCCCCCEEEEE
Q 012522 412 RGKDCRFGVIS 422 (461)
Q Consensus 412 ~~~~~~~gl~~ 422 (461)
. ..+++|+.
T Consensus 94 G--~~~~vlv~ 102 (375)
T cd00829 94 G--LADVVLVV 102 (375)
T ss_pred C--CCCEEEEE
Confidence 6 56666654
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=82.33 E-value=5.7 Score=42.44 Aligned_cols=96 Identities=19% Similarity=0.212 Sum_probs=62.8
Q ss_pred EEEEeeeeccCC---CC--CC-CcHHHHHHHHHHHcCCC--CCCccEEEecCCC----hHHHHHHHHHcCCCCCCcCCCC
Q 012522 318 VFRSFSAVGVDP---SV--MG-IGPAVAIPAAVKSAGLQ--IDDINLFEINEAF----ASQYVYCIKKLGLDPEKVNVNG 385 (461)
Q Consensus 318 ~i~g~~~~~~~p---~~--~~-~~~~~ai~~aL~~AGl~--~~DID~~eiheaf----a~~~~~~~e~LGl~~~~vn~~G 385 (461)
.|+|++.....+ .. .. .-...+++++|+.+|++ ++|||.+.+-..+ ........+.||+.+... .
T Consensus 7 ~IVGvG~t~~~~~~~~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p~~~-~-- 83 (498)
T PRK08257 7 VIVGVGQVTERPDDPAYGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADPART-V-- 83 (498)
T ss_pred EEEEeeecccccCCcccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCCcce-e--
Confidence 577777654322 11 11 11357999999999999 9999977643222 123355678999965332 1
Q ss_pred CcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEE
Q 012522 386 GAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVIS 422 (461)
Q Consensus 386 G~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~ 422 (461)
..+..|+++...+.++...+... ..++.|+.
T Consensus 84 ----~~~~GG~s~~~~v~~Aa~~IasG--~advVLv~ 114 (498)
T PRK08257 84 ----YSPVGGNSPQRLVNEAALRIAAG--EADVALVA 114 (498)
T ss_pred ----EecCCCHHHHHHHHHHHHHHHCC--CCCEEEEe
Confidence 23456778888888998989877 67777663
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=82.25 E-value=4.6 Score=34.03 Aligned_cols=101 Identities=19% Similarity=0.219 Sum_probs=53.1
Q ss_pred EEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCC---CC
Q 012522 52 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE---TV 128 (461)
Q Consensus 52 ~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~---~~ 128 (461)
+|.|.+.+-=+. ........+.. -..+++++||+++|++|++||.|..-. ++...........+...++-.. ..
T Consensus 3 ~i~g~~~~~dg~-~~~~~~~p~~~-~~~~~i~~al~~agi~~~~I~~i~~hg-~Gt~~~D~~E~~ai~~~~~~~~~~~~~ 79 (119)
T PF02801_consen 3 VIRGYGVNSDGA-RSSSLTAPNGA-ALARAIRRALADAGISPEDIDYIEAHG-TGTPLGDAAEAEAIARVFGDSARQQPV 79 (119)
T ss_dssp EEEEEEEEE-SS-STSSSSSTTHH-HHHHHHHHHHHHHTS-GGGEEEEE-----SSHHHHHHHHHHHHHHHGGGGGTSTS
T ss_pred EEEEEEEECCCC-CCCCCcCcCHH-HHHHHHHHHHhhhccccccceeeeeec-cccccchhhhhhhhhhhhccccccccc
Confidence 456666554331 11122233333 446889999999999999999876522 1211101122333343333211 12
Q ss_pred CeEEe-----CCCCchHHHHHHHHHHHHHcCC
Q 012522 129 PLRTV-----NRQCSSGLQAVADVATAIKAGL 155 (461)
Q Consensus 129 ~~~~v-----~~~CaSgl~Al~~A~~~I~sG~ 155 (461)
++..+ ...+++|+..|..+...++.|.
T Consensus 80 ~v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ 111 (119)
T PF02801_consen 80 PVGSVKSNIGHTEAASGLLSLAKALLALEHGT 111 (119)
T ss_dssp EEE-THHHH-B-GGGHHHHHHHHHHHHHHHTE
T ss_pred ceeccccccccccccchHHHHHHHHHHHhcCC
Confidence 33322 2457899999999998888774
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=82.21 E-value=4.3 Score=41.28 Aligned_cols=42 Identities=12% Similarity=0.140 Sum_probs=34.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCChHHHHHHHHHcCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN-----EAFASQYVYCIKKLGLDP 378 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih-----eafa~~~~~~~e~LGl~~ 378 (461)
..|++++|+++|++++|||++... ...+.......+.||+..
T Consensus 65 ~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~ 111 (353)
T PRK12880 65 KHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSS 111 (353)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC
Confidence 579999999999999999999744 335567778889999964
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=82.01 E-value=7 Score=38.76 Aligned_cols=69 Identities=20% Similarity=0.184 Sum_probs=43.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA-----FASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea-----fa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
..+++++|+++|++++|||.+..... +........+.||+...+.. .+ ....++|+..+..+...++.
T Consensus 56 ~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~~~~~~------~v-~~~C~s~~~al~~A~~~i~~ 128 (318)
T TIGR00747 56 FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKGIPAF------DL-SAACAGFIYALSVAKQYIES 128 (318)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCCCCcEe------eh-hhhhHHHHHHHHHHHHHHHc
Confidence 57999999999999999999865322 33344567788998753311 11 11223445555555555654
Q ss_pred c
Q 012522 412 R 412 (461)
Q Consensus 412 ~ 412 (461)
.
T Consensus 129 g 129 (318)
T TIGR00747 129 G 129 (318)
T ss_pred C
Confidence 4
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.84 E-value=5 Score=41.99 Aligned_cols=75 Identities=15% Similarity=0.102 Sum_probs=51.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCC-CC-cCCCCCcccccCchhhHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAF-----ASQYVYCIKKLGLDP-EK-VNVNGGAVALGHPLGATGARCVATLLSEM 409 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheaf-----a~~~~~~~e~LGl~~-~~-vn~~GG~~~~Ghp~gatG~~~~~~~~~~L 409 (461)
..+++++|+++||+++|||.+.+...+ ........+.+|++. .+ ++++ -.++||+..+..+...+
T Consensus 32 ~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~--------~~CaSg~~al~~A~~~I 103 (426)
T PRK08170 32 VAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQ--------RNCASGMQALDSAAANI 103 (426)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeecc--------chhhHHHHHHHHHHHHH
Confidence 579999999999999999988664332 122334567899964 33 2322 22677888888888888
Q ss_pred HccCCCCCEEEE
Q 012522 410 KRRGKDCRFGVI 421 (461)
Q Consensus 410 ~~~~~~~~~gl~ 421 (461)
+.. ..++.|+
T Consensus 104 ~sG--~~d~vLv 113 (426)
T PRK08170 104 ALG--RADLVLA 113 (426)
T ss_pred HCC--CCCEEEE
Confidence 876 5666665
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=81.53 E-value=6.9 Score=38.93 Aligned_cols=43 Identities=28% Similarity=0.397 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCC
Q 012522 336 PAVAIPAAVKSAGLQIDDINLFEINEA-----FASQYVYCIKKLGLDP 378 (461)
Q Consensus 336 ~~~ai~~aL~~AGl~~~DID~~eihea-----fa~~~~~~~e~LGl~~ 378 (461)
...+++++|+++|++++|||++..... +........+.||+..
T Consensus 57 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~~ 104 (325)
T PRK12879 57 AIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIPN 104 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCC
Confidence 358999999999999999998864322 2334455678899864
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.19 E-value=6.1 Score=41.04 Aligned_cols=77 Identities=13% Similarity=0.058 Sum_probs=52.6
Q ss_pred HHHHHHHHHHc-CCCCCCccEEEecCCC------hHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSA-GLQIDDINLFEINEAF------ASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEM 409 (461)
Q Consensus 337 ~~ai~~aL~~A-Gl~~~DID~~eiheaf------a~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L 409 (461)
..+++++|+++ ||+++|||.+.+-..+ ........+.+|+...+.. .-+-.++||...+..+.+.+
T Consensus 32 ~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~~~p~~-------~v~~~caSG~~av~~Aa~~I 104 (406)
T PRK07851 32 AQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYDFLPGT-------TVNRYCSSSLQTTRMAFHAI 104 (406)
T ss_pred HHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCCCCCee-------eeeccchhHHHHHHHHHHHH
Confidence 57999999996 9999999988643211 1122356688999653311 11334788888888898999
Q ss_pred HccCCCCCEEEEE
Q 012522 410 KRRGKDCRFGVIS 422 (461)
Q Consensus 410 ~~~~~~~~~gl~~ 422 (461)
+.. ..+++|+.
T Consensus 105 ~sG--~~d~vLv~ 115 (406)
T PRK07851 105 KAG--EGDVFISA 115 (406)
T ss_pred HCC--CCCEEEEe
Confidence 876 56666653
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=80.40 E-value=8.2 Score=38.17 Aligned_cols=69 Identities=17% Similarity=0.234 Sum_probs=43.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA-----FASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea-----fa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
..+++++|+++|++++|||.+..-.. +........+.||+...+. ..+. ...++|...+..+...++.
T Consensus 55 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~~~~~------~~v~-~~C~s~~~al~~A~~~i~~ 127 (320)
T cd00830 55 VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAKNAAA------FDIN-AACSGFLYGLSTAAGLIRS 127 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCcE------eecc-ccchHHHHHHHHHHHHHHc
Confidence 57899999999999999999864221 2334456778899964331 1111 1234455555555566655
Q ss_pred c
Q 012522 412 R 412 (461)
Q Consensus 412 ~ 412 (461)
.
T Consensus 128 g 128 (320)
T cd00830 128 G 128 (320)
T ss_pred C
Confidence 4
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=80.39 E-value=3.2 Score=42.01 Aligned_cols=81 Identities=22% Similarity=0.201 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeE-----Ee-CCCCchHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR-----TV-NRQCSSGLQAVADVAT 149 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~-----~v-~~~CaSgl~Al~~A~~ 149 (461)
+.+.++++++|+++|++++|||.+++=. . ....-..++..+|+|...-.. .+ |.+++|-..+|..+..
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq----~--n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~ 282 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQ----P--NGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLD 282 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCC----C--chHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHH
Confidence 4667888999999999999999887622 1 234455677889997543221 11 3445555566666655
Q ss_pred HHHcCCCCEEEEEee
Q 012522 150 AIKAGLYDIGIAAGL 164 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~ 164 (461)
.++.| |.+|.+++
T Consensus 283 ~~~~G--d~vll~~~ 295 (347)
T PRK04262 283 VAKPG--DRILVVSF 295 (347)
T ss_pred hCCCC--CEEEEEec
Confidence 44445 67777764
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.26 E-value=6.3 Score=40.86 Aligned_cols=75 Identities=15% Similarity=0.135 Sum_probs=51.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCC-CCc-CCCCCcccccCchhhHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAF-----ASQYVYCIKKLGLDP-EKV-NVNGGAVALGHPLGATGARCVATLLSEM 409 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheaf-----a~~~~~~~e~LGl~~-~~v-n~~GG~~~~Ghp~gatG~~~~~~~~~~L 409 (461)
..+++++|+++||+++|||.+.+-..+ ..........+|++. .+. ++ +-..+||+..+..+...+
T Consensus 31 ~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V--------~~~CaSg~~Al~~A~~~I 102 (404)
T PRK06205 31 ATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQL--------DRRCGSGLQAVITAAMQV 102 (404)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeeh--------hhhhhHHHHHHHHHHHHH
Confidence 579999999999999999988643221 122234567788874 331 11 334577888888888888
Q ss_pred HccCCCCCEEEE
Q 012522 410 KRRGKDCRFGVI 421 (461)
Q Consensus 410 ~~~~~~~~~gl~ 421 (461)
+.. ..++.|+
T Consensus 103 ~sG--~~d~vLv 112 (404)
T PRK06205 103 QTG--AADVVIA 112 (404)
T ss_pred HcC--CCCEEEE
Confidence 876 5666666
|
|
| >COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=80.09 E-value=2.8 Score=39.65 Aligned_cols=80 Identities=15% Similarity=0.104 Sum_probs=51.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHH
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIK 152 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~ 152 (461)
...+.+...+.++|.++++++.|+|.|+++.--+.++ |--++-.++..|.+..+.|.+.|++ +.++. ...+
T Consensus 36 ~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFT-GlRIG~~~AkgLA~~l~iplvgvss-----L~~~A---~~~~ 106 (220)
T COG1214 36 NHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFT-GLRIGVAFAKGLALALNIPLVGVSS-----LEALA---QGGA 106 (220)
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCccc-chhhHHHHHHHHHHHcCCCEEEeCH-----HHHHH---Hhhh
Confidence 4567888999999999999999999999987644444 5444444444333333567887743 33332 2244
Q ss_pred cCCCCEEEE
Q 012522 153 AGLYDIGIA 161 (461)
Q Consensus 153 sG~~d~vLv 161 (461)
......+++
T Consensus 107 ~~~~~~v~v 115 (220)
T COG1214 107 EKNAGFVLV 115 (220)
T ss_pred ccCCCceEE
Confidence 444555555
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=80.03 E-value=17 Score=36.94 Aligned_cols=103 Identities=15% Similarity=0.085 Sum_probs=59.5
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~-agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
+.|.|.|.+...-. +.-...+..+. .+++.++++ +|++|+|||.+-+= +.+ ..........+||..+
T Consensus 225 ~pv~I~g~~~~~~~--~~~~~~d~~~~----~~~~~a~~~aAgi~~~diD~~Ei~----D~F--~~~~l~~~e~lGl~g~ 292 (352)
T PRK07937 225 RPAWITGIEHRIES--PSLGARDLTRS----PSTALAAEAATGGDAGGVDVAELH----APF--THQELILREALGLGDK 292 (352)
T ss_pred CcEEEEEEEEeeCC--ccccccccccH----HHHHHHHHHhcCCCHHHCCEEEEe----CCC--hHHHHHHHHHcCCCCC
Confidence 45888888774211 10001123322 334455555 59999999987652 222 2223344567887322
Q ss_pred CCeEEe------CCCCchHHHHHHHHHHHHHcCCCCEEEEEe
Q 012522 128 VPLRTV------NRQCSSGLQAVADVATAIKAGLYDIGIAAG 163 (461)
Q Consensus 128 ~~~~~v------~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G 163 (461)
.|+.+- ....+||+.-+..++..++.+.++++|+.+
T Consensus 293 ~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~g~~a~~~l~~~ 334 (352)
T PRK07937 293 TKVNPSGGALAANPMFAAGLERIGEAARHIWDGSARRALAHA 334 (352)
T ss_pred CCcCCCccchhcCchhHHHHHHHHHHHHHHhccCCCEEEEec
Confidence 232221 112347888889999999988899999875
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 461 | ||||
| 2wu9_A | 442 | Crystal Structure Of Peroxisomal Kat2 From Arabidop | 0.0 | ||
| 2wua_A | 440 | Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolas | 0.0 | ||
| 2c7y_A | 404 | Plant Enzyme Length = 404 | 0.0 | ||
| 2iik_A | 418 | Crystal Structure Of Human Peroxisomal Acetyl-Coa A | 1e-127 | ||
| 1afw_A | 393 | The 1.8 Angstrom Crystal Structure Of The Dimeric P | 5e-93 | ||
| 1pxt_A | 390 | The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoac | 5e-93 | ||
| 1m1t_A | 392 | Biosynthetic Thiolase, Q64a Mutant Length = 392 | 9e-72 | ||
| 2vu2_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Wit | 4e-71 | ||
| 1dlu_A | 389 | Unliganded Biosynthetic Thiolase From Zoogloea Rami | 6e-71 | ||
| 2wku_A | 392 | Biosynthetic Thiolase From Z. Ramigera. The N316h M | 1e-70 | ||
| 2wkv_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 2e-70 | ||
| 2wl5_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 4e-70 | ||
| 1m1o_A | 392 | Crystal Structure Of Biosynthetic Thiolase, C89a Mu | 5e-70 | ||
| 1m4s_A | 392 | Biosynthetic Thiolase, Cys89 Acetylated, Unliganded | 7e-70 | ||
| 2wl4_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 7e-70 | ||
| 1qfl_A | 389 | Biosynthetic Thiolase From Zoogloea Ramigera In Com | 8e-70 | ||
| 2wl6_A | 392 | Biosynthetic Thiolase From Z. Ramigera. The N316h-H | 1e-69 | ||
| 3ss6_A | 394 | Crystal Structure Of The Bacillus Anthracis Acetyl- | 3e-69 | ||
| 2wl5_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 8e-69 | ||
| 4e1l_A | 395 | Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla | 1e-68 | ||
| 2wl4_D | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-68 | ||
| 2wl4_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-68 | ||
| 4dd5_A | 396 | Biosynthetic Thiolase (Thla1) From Clostridium Diff | 6e-68 | ||
| 2wl4_B | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 3e-67 | ||
| 1wdk_C | 390 | Fatty Acid Beta-Oxidation Multienzyme Complex From | 3e-67 | ||
| 1ulq_A | 401 | Crystal Structure Of Tt0182 From Thermus Thermophil | 1e-66 | ||
| 2wkt_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-66 | ||
| 2wkt_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 2e-65 | ||
| 1wl4_A | 397 | Human Cytosolic Acetoacetyl-Coa Thiolase Complexed | 8e-65 | ||
| 3goa_A | 387 | Crystal Structure Of The Salmonella Typhimurium Fad | 2e-60 | ||
| 3svk_A | 407 | Crystal Structure Of Acetyl-Coa Acetyltransferase F | 3e-49 | ||
| 2ib7_A | 395 | Crystallographic And Kinetic Studies Of Human Mitoc | 6e-46 | ||
| 2ibu_A | 395 | Crystallographic And Kinetic Studies Of Human Mitoc | 1e-44 | ||
| 2f2s_A | 406 | Human Mitochondrial Acetoacetyl-Coa Thiolase Length | 2e-44 |
| >pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis Thaliana Length = 442 | Back alignment and structure |
|
| >pdb|2WUA|A Chain A, Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolase From Sunflower Length = 440 | Back alignment and structure |
|
| >pdb|2C7Y|A Chain A, Plant Enzyme Length = 404 | Back alignment and structure |
|
| >pdb|2IIK|A Chain A, Crystal Structure Of Human Peroxisomal Acetyl-Coa Acyl Transferase 1 (Acaa1) Length = 418 | Back alignment and structure |
|
| >pdb|1AFW|A Chain A, The 1.8 Angstrom Crystal Structure Of The Dimeric Peroxisomal Thiolase Of Saccharomyces Cerevisiae Length = 393 | Back alignment and structure |
|
| >pdb|1PXT|A Chain A, The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoacyl-Coa Thiolase Of Saccharomyces Cerevisiae: A Five Layered A-B-A- B-A Structure, Constructed From Two Core Domains Of Identical Topology Length = 390 | Back alignment and structure |
|
| >pdb|1M1T|A Chain A, Biosynthetic Thiolase, Q64a Mutant Length = 392 | Back alignment and structure |
|
| >pdb|2VU2|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex With S- Pantetheine-11-pivalate. Length = 392 | Back alignment and structure |
|
| >pdb|1DLU|A Chain A, Unliganded Biosynthetic Thiolase From Zoogloea Ramigera Length = 389 | Back alignment and structure |
|
| >pdb|2WKU|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h Mutant. Length = 392 | Back alignment and structure |
|
| >pdb|2WKV|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316d Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WL5|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|1M1O|A Chain A, Crystal Structure Of Biosynthetic Thiolase, C89a Mutant, Complexed With Acetoacetyl-Coa Length = 392 | Back alignment and structure |
|
| >pdb|1M4S|A Chain A, Biosynthetic Thiolase, Cys89 Acetylated, Unliganded Form Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|1QFL|A Chain A, Biosynthetic Thiolase From Zoogloea Ramigera In Complex With A Reaction Intermediate. Length = 389 | Back alignment and structure |
|
| >pdb|2WL6|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h-H348n Mutant. Length = 392 | Back alignment and structure |
|
| >pdb|3SS6|A Chain A, Crystal Structure Of The Bacillus Anthracis Acetyl-Coa Acetyltransferase Length = 394 | Back alignment and structure |
|
| >pdb|2WL5|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|4E1L|A Chain A, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From Clostridium Difficile Length = 395 | Back alignment and structure |
|
| >pdb|2WL4|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|4DD5|A Chain A, Biosynthetic Thiolase (Thla1) From Clostridium Difficile Length = 396 | Back alignment and structure |
|
| >pdb|2WL4|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|1WDK|C Chain C, Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (Native2) Length = 390 | Back alignment and structure |
|
| >pdb|1ULQ|A Chain A, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8 Length = 401 | Back alignment and structure |
|
| >pdb|2WKT|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WKT|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|1WL4|A Chain A, Human Cytosolic Acetoacetyl-Coa Thiolase Complexed With Coa Length = 397 | Back alignment and structure |
|
| >pdb|3GOA|A Chain A, Crystal Structure Of The Salmonella Typhimurium Fada 3- Ketoacyl-Coa Thiolase Length = 387 | Back alignment and structure |
|
| >pdb|3SVK|A Chain A, Crystal Structure Of Acetyl-Coa Acetyltransferase From Mycobacterium Avium Length = 407 | Back alignment and structure |
|
| >pdb|2IB7|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-Coa Thiolase (T2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 | Back alignment and structure |
|
| >pdb|2IBU|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-coa Thiolase (t2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 | Back alignment and structure |
|
| >pdb|2F2S|A Chain A, Human Mitochondrial Acetoacetyl-Coa Thiolase Length = 406 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Length = 442 | Back alignment and structure |
|---|
Score = 685 bits (1770), Expect = 0.0
Identities = 341/437 (78%), Positives = 384/437 (87%)
Query: 25 SPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKA 84
+ AG++A Y R + DDVVIVAA+RT +CK+KRG FKDT DDLLAPVL+A
Sbjct: 6 HHHVDDDDKMAGDSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRA 65
Query: 85 VIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAV 144
+IEKT LNPSEVGDIVVGTVLAPGS RA ECRMAAFYAGFPETV +RTVNRQCSSGLQAV
Sbjct: 66 LIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAV 125
Query: 145 ADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204
ADVA AIKAG YDIGI AGLESMT N ++ G VNP V+ F QA++CLLPMG+TSENVAQ
Sbjct: 126 ADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQ 185
Query: 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIR 264
RFGV+RQEQD AAV+SHR+AAAATA+GKFKDEIIPV TK+VDPKTG EK +T+SVDDGIR
Sbjct: 186 RFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIR 245
Query: 265 PNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSA 324
P TT+A L KLKP FKKDGTTTAGN+SQVSDGAGAVLLMKRS+A+QKGLP+LGVFR+F+A
Sbjct: 246 PTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAA 305
Query: 325 VGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVN 384
VGVDP++MGIGPAVAIPAAVK+AGL++DDI+LFEINEAFASQ+VYC KLGLDPEK+NVN
Sbjct: 306 VGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVN 365
Query: 385 GGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFERGDCVDEL 444
GGA+A+GHPLGATGARCVATLL EMKRRGKDCRFGV+SMCIG+GMGAAAVFERGD VDEL
Sbjct: 366 GGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGDGVDEL 425
Query: 445 CNARMVPTHTHLSKDAK 461
NAR V LSKDA+
Sbjct: 426 RNARKVEAQGLLSKDAR 442
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Length = 418 | Back alignment and structure |
|---|
Score = 629 bits (1626), Expect = 0.0
Identities = 236/427 (55%), Positives = 305/427 (71%), Gaps = 11/427 (2%)
Query: 12 LQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKD 71
+ H SS + ++ DVV+V RTAIC+A RGGFKD
Sbjct: 1 MHHHHHHSSGVD-----LGTENLYFQSMAPQASA---ADVVVVHGRRTAICRAGRGGFKD 52
Query: 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR 131
T D+LL+ V+ AV++ L P ++GDI VG VL PG+ A+ R+A F + PETVPL
Sbjct: 53 TTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGA-GAIMARIAQFLSDIPETVPLS 111
Query: 132 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDC 191
TVNRQCSSGLQAVA +A I+ G YDIG+A G+ESM++ G + ++ +ARDC
Sbjct: 112 TVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDC 171
Query: 192 LLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGV 251
L+PMGITSENVA+RFG++R++QD A+ S ++AA A + G F+ EI+PV T + D K G
Sbjct: 172 LIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDK-GT 230
Query: 252 EKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQK 311
++ +T++ D+GIRP+TT+ LAKLKPAFKKDG+TTAGN+SQVSDGA A+LL +RS A +
Sbjct: 231 KRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAAAILLARRSKAEEL 290
Query: 312 GLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCI 371
GLPILGV RS++ VGV P +MGIGPA AIP A++ AGL + D+++FEINEAFASQ YC+
Sbjct: 291 GLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYCV 350
Query: 372 KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA 431
+KL L PEKVN GGAVALGHPLG TGAR V TLL+E+KRRGK +GV+SMCIG+GMGA
Sbjct: 351 EKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKR-AYGVVSMCIGTGMGA 409
Query: 432 AAVFERG 438
AAVFE
Sbjct: 410 AAVFEYP 416
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393 | Back alignment and structure |
|---|
Score = 596 bits (1540), Expect = 0.0
Identities = 191/397 (48%), Positives = 255/397 (64%), Gaps = 22/397 (5%)
Query: 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK----TRLNPSEVGDIVVGTV 104
+DVVIVAA R+AI K +G FKD D LL L I + R + + + ++ G V
Sbjct: 10 EDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNV 69
Query: 105 LAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGL 164
L G+ A E R A +G P + P +NRQCSSGL AV D+A IK G DIG+A G+
Sbjct: 70 LNVGA-GATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGV 128
Query: 165 ESMTVNSIS---VVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESH 221
ESMT N + + + +++ +A+ CL+PMGIT+ENVA F ++R++QD A S+
Sbjct: 129 ESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSY 188
Query: 222 RRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281
++A A G F+DEI+P+ D+G RPN T L+ ++PAF K
Sbjct: 189 QKAYKAKNEGLFEDEILPIKLP---------DGSICQSDEGPRPNVTAESLSSIRPAFIK 239
Query: 282 D-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
D GTTTAGNASQVSDG VLL +RS+A Q LP+LG + F VGV P +MG+GPA AI
Sbjct: 240 DRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAI 299
Query: 341 PAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGAR 400
P +++ GLQ+ DI++FEINEAFA+Q +YCI KLG+D KVN GGA+ALGHPLG TGAR
Sbjct: 300 PKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGAR 359
Query: 401 CVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
VAT+L E+K+ + GV+SMCIG+GMGAAA+F +
Sbjct: 360 QVATILRELKKD----QIGVVSMCIGTGMGAAAIFIK 392
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Length = 390 | Back alignment and structure |
|---|
Score = 473 bits (1221), Expect = e-166
Identities = 162/398 (40%), Positives = 231/398 (58%), Gaps = 24/398 (6%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPG 108
DVVIV RT + ++K G ++T A+D+ A ++ V+E+ ++++P EV D++ G V
Sbjct: 6 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTL 65
Query: 109 STRAMEC-----RMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAG 163
E RMA+ P T +TV+R C S + A+ A AI G D+ + G
Sbjct: 66 -----EQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGG 120
Query: 164 LESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRR 223
+E M +S++ V+P + A MG+T+E + + G++R++QD AV SH+
Sbjct: 121 VEHMG--HVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQL 178
Query: 224 AAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK-KD 282
A AT GKFKDEIIP+ + D D+ IRP+TT+ LA LKPAF K
Sbjct: 179 AHKATVEGKFKDEIIPM--QGYDEN---GFLKIFDYDETIRPDTTLESLAALKPAFNPKG 233
Query: 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPA 342
GT TAG +SQ++DGA +++M A GL L V RS + GVDP++MG GP A
Sbjct: 234 GTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQK 293
Query: 343 AVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGA 399
A+K AGL + DI+ E+NEAFA+Q + +K L + EKVN++GGA+ALGHP G +GA
Sbjct: 294 ALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGA 353
Query: 400 RCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
R TLL+ MK+ G FG+ +MCIG G G A VFER
Sbjct: 354 RISGTLLNVMKQNGG--TFGLSTMCIGLGQGIATVFER 389
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Length = 387 | Back alignment and structure |
|---|
Score = 472 bits (1218), Expect = e-166
Identities = 164/398 (41%), Positives = 225/398 (56%), Gaps = 24/398 (6%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPG 108
VVIV A RT + ++K G F++ A+DL A ++++++ + L + + DI G V
Sbjct: 3 QVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTL 62
Query: 109 STRAMEC-----RMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAG 163
E R AA A P +VP TVNR C S +QA+ D A I G + + G
Sbjct: 63 -----EQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGG 117
Query: 164 LESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRR 223
+E M +S +P + MG+T+E +++ G++R+ QD A SH R
Sbjct: 118 VEHMGHVPMSHGVDFHPG--LSRNVAKAAGMMGLTAEMLSRLHGISREMQDQFAARSHAR 175
Query: 224 AAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-D 282
A AAT SG FK EIIP D + D+ IRP TT+ L+ L+PAF
Sbjct: 176 AWAATQSGAFKTEIIPT--GGHDADG---VLKQFNYDEVIRPETTVEALSTLRPAFDPVS 230
Query: 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPA 342
GT TAG +S +SDGA A+L+M S A + GL RS + VG DPS+MG GP A
Sbjct: 231 GTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKL 290
Query: 343 AVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDP---EKVNVNGGAVALGHPLGATGA 399
A+K AGL DI++FE+NEAFA+Q + CIK LGL EK+N+NGGA+ALGHPLG +GA
Sbjct: 291 ALKKAGLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGA 350
Query: 400 RCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
R TL++ M+R+ +FG+ +MCIG G G A VFER
Sbjct: 351 RISTTLINLMERKDA--QFGLATMCIGLGQGIATVFER 386
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394 | Back alignment and structure |
|---|
Score = 449 bits (1159), Expect = e-157
Identities = 159/399 (39%), Positives = 229/399 (57%), Gaps = 22/399 (5%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
+VVI AA R+ I G K+ +L PVL+ +++ + P EV ++++G +
Sbjct: 6 NVVITAAVRSPIGTFG-GALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTD 64
Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
R AA AGFP+TV T+ RQCSSG+QA+ A I+ G+ ++ +A G+E+M+
Sbjct: 65 EANT-ARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMS- 122
Query: 170 NSISVV-----GQVNPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLAAV 218
+S + GQ EI + L + MG T+EN+ +++ +TR+EQD A+
Sbjct: 123 SSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMGETAENLVEQYEITREEQDEVAL 182
Query: 219 ESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278
SH A A SG F D+I+P+ K + V S D+ R + T LA LKPA
Sbjct: 183 RSHTLALKAIESGYFDDQIVPITIKE---RRKE---VVFSKDEHPRADITAEKLAGLKPA 236
Query: 279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAV 338
F+KDG+ TAGNAS ++DG+ ++LM A +KGL L +S GVDP +MGIGPA
Sbjct: 237 FRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAP 296
Query: 339 AIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATG 398
AI ++ ++D +L EINEAFA+QY+ K+L LD EKVNVNG V LGHP+G TG
Sbjct: 297 AIRKGLEKVDWSLEDADLLEINEAFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTG 356
Query: 399 ARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
AR +L+ E+KRRG G+ S+C+G G+G A E
Sbjct: 357 ARITVSLIHELKRRGL--EKGIASLCVGGGIGVALFIEA 393
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396 | Back alignment and structure |
|---|
Score = 444 bits (1146), Expect = e-155
Identities = 158/401 (39%), Positives = 230/401 (57%), Gaps = 25/401 (6%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
+VVI +A RTA+ G FK A +L K I++ + P + + ++G VL G
Sbjct: 8 EVVIASAARTAVGSFG-GAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGL 66
Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
+ + R A AG P P T+N C SGL++V+ + I G DI + G E+M+
Sbjct: 67 GQNI-ARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMS- 124
Query: 170 NSISVVGQV-------NPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLA 216
S +V + + + +D L MGIT+EN+A+++ +TR+EQD
Sbjct: 125 MSPYLVPSARYGARMGDAAF-VDSMIKDGLSDIFNNYHMGITAENIAEQWNITREEQDEL 183
Query: 217 AVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK 276
A+ S +A A A GKF +EI+PV I K + D+ I+P TT+ LAKL+
Sbjct: 184 ALASQNKAEKAQAEGKFDEEIVPV--VIKGRK----GDTVVDKDEYIKPGTTMEKLAKLR 237
Query: 277 PAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGP 336
PAFKKDGT TAGNAS ++DGA +++M + A + G+ L S+ GVDP +MG GP
Sbjct: 238 PAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGP 297
Query: 337 AVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGA 396
A A+++A + I+DI+L E NEAFA+Q V I+ L +D KVNVNGGA+A+GHP+G
Sbjct: 298 VPATKKALEAANMTIEDIDLVEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGC 357
Query: 397 TGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
+GAR + TLL EMKRR + G+ ++CIG GMG + +R
Sbjct: 358 SGARILTTLLYEMKRRDA--KTGLATLCIGGGMGTTLIVKR 396
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 401 | Back alignment and structure |
|---|
Score = 443 bits (1141), Expect = e-154
Identities = 161/410 (39%), Positives = 229/410 (55%), Gaps = 35/410 (8%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
+ IV A RT I K G DDLLA L +++++ + EV D+ G G
Sbjct: 3 EAWIVEAVRTPIGKHG-GALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGE 61
Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT- 168
RMA AGFP V TVNR C SGL+AVA A AI AG + I +G+ESM+
Sbjct: 62 DNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR 121
Query: 169 -------------------VNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVT 209
++ VNPK+ QA MG T+EN+A+ +G+
Sbjct: 122 APYAVPKPERGFPTGNLVMYDTTLGWRFVNPKM----QALYGTESMGETAENLAEMYGIR 177
Query: 210 RQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTI 269
R+EQD A+ SH++A A G+F+DE++PV K ++ + + D+G R +T++
Sbjct: 178 REEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVK------RGKEEILVEQDEGPRRDTSL 231
Query: 270 ADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP 329
LA L+P F++ GT TAGN+S ++DGA AVLL+ A GL L R+ + GV P
Sbjct: 232 EKLAALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPP 291
Query: 330 SVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL--DPEKVNVNGGA 387
+MGIGP A A++ AGL D+ L E+NEAFA+Q + +++ L + +++N NGGA
Sbjct: 292 RIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGA 351
Query: 388 VALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
+ALGHPLGA+GAR + TL+ EM+RR +FG+ +MCIG G G A V E
Sbjct: 352 IALGHPLGASGARILTTLVHEMRRRKV--QFGLATMCIGVGQGIAVVVEG 399
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395 | Back alignment and structure |
|---|
Score = 442 bits (1140), Expect = e-154
Identities = 163/400 (40%), Positives = 235/400 (58%), Gaps = 22/400 (5%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
DVVIV+A RT I G FK+T A L +K I + LN SE+ ++++G VL G
Sbjct: 6 DVVIVSAVRTPIGSFG-GVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGL 64
Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
+ + R A AG P +VP TVN+ C SGL++V A +I +G D+ IA G E+M+
Sbjct: 65 GQNV-ARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMS- 122
Query: 170 NSISVVGQV------NPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLAA 217
+ +V + + D L MGIT+EN+A +F TR+ QD A
Sbjct: 123 QAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTREMQDKLA 182
Query: 218 VESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277
+ES +A A + +FK+EI+PV ++ + + TI D+ + T L+KLKP
Sbjct: 183 LESQNKAENAIKNNRFKEEIVPV--DVLIRRGKI---ETIDKDEYPKLGMTFEGLSKLKP 237
Query: 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPA 337
AFKKDGT TAGNAS ++DGA ++LM + A + G+ L +S+++ GV+P VMG GP
Sbjct: 238 AFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPI 297
Query: 338 VAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGAT 397
A A+K AGL I+DI+L E NEAFA+Q + +L +D K+NVNGGA+ALGHP+GA+
Sbjct: 298 PATRKALKKAGLSINDIDLIEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGAS 357
Query: 398 GARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
GAR + TL+ EM++R G+ ++CIG G G + V R
Sbjct: 358 GARILVTLIYEMQKRKV--ETGLATLCIGGGQGISMVVSR 395
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Length = 407 | Back alignment and structure |
|---|
Score = 432 bits (1114), Expect = e-150
Identities = 140/413 (33%), Positives = 207/413 (50%), Gaps = 39/413 (9%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIE-KTRLNPSEVGDIVVGTVLAPG 108
+ I A RT K K G + +L+ ++ + L+ + + D+++G V G
Sbjct: 8 EAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVG 67
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
R A AG PET +NR C+SGL+AV A +++G D+ +A G+ESM+
Sbjct: 68 DQGGDIARTAVLAAGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMS 127
Query: 169 ---VNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAA 225
+ S +P+ T R +P GI ++ +A G +R++ D A+ S ++AA
Sbjct: 128 RVPMGSDGGAWATDPE----TNYRIGFVPQGIGADLIATLEGFSREDVDAYALRSQQKAA 183
Query: 226 AATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTT 285
AA + G F ++PV V + D+ +RP+TT+ LAKLK AF G
Sbjct: 184 AAWSGGYFAKSVVPV--------RDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEM 235
Query: 286 ---------------------TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSA 324
T GN+S + DGA VL+ +GL + +
Sbjct: 236 GGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATAT 295
Query: 325 VGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVN 384
G DP +M GP A + AGL IDDI+LFE+NEAFAS + K L + EK+NVN
Sbjct: 296 SGSDPVIMLTGPTPATRKVLDRAGLTIDDIDLFELNEAFASVVLKFQKDLNIPDEKLNVN 355
Query: 385 GGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
GGA+A+GHPLGATGA T++ E++RR R +I++CIG GMG A + ER
Sbjct: 356 GGAIAMGHPLGATGAMITGTMVDELERRNA--RRALITLCIGGGMGVATIIER 406
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392 | Back alignment and structure |
|---|
Score = 431 bits (1112), Expect = e-150
Identities = 167/400 (41%), Positives = 231/400 (57%), Gaps = 22/400 (5%)
Query: 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
+VI +A RTA+ G F +T A +L A V+ AV+E+ + EV ++++G VL G
Sbjct: 3 PSIVIASAARTAVGSFN-GAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAG 61
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
+ R AA AG P+ +N+ C SGL+AVA I G I +A G+ESM+
Sbjct: 62 EGQNP-ARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMS 120
Query: 169 VNSISVVGQVNPKVEIFTQARDCLL-----------PMGITSENVAQRFGVTRQEQDLAA 217
+ + D ++ MG T+ENVA+++ ++R EQD A
Sbjct: 121 -MAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFA 179
Query: 218 VESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277
V S +A AA G+FKDEI+P K G + +T+ D+ IR T+ +AKL+P
Sbjct: 180 VASQNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRP 233
Query: 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPA 337
AF K+GT TAGNAS ++DGA A LLM + A ++G+ LG S++ VGVDP VMG GP
Sbjct: 234 AFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPI 293
Query: 338 VAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGAT 397
A A++ AG +I D++L E NEAFA+Q K LG DP VNVNGGA+A+GHP+GA+
Sbjct: 294 PASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGAS 353
Query: 398 GARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
GAR + TLL EMKRRG R G+ ++CIG GMG A E
Sbjct: 354 GARILNTLLFEMKRRGA--RKGLATLCIGGGMGVAMCIES 391
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397 | Back alignment and structure |
|---|
Score = 417 bits (1075), Expect = e-144
Identities = 159/402 (39%), Positives = 229/402 (56%), Gaps = 24/402 (5%)
Query: 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
D VVIV+A RT I G DL + V+K V+++ + P +V +++ G VLA G
Sbjct: 6 DPVVIVSAARTIIGSFN-GALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAG 64
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
+ R A+ AG P +VP + C SGL+AV +I G I +A G+E+M+
Sbjct: 65 CGQNP-VRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMS 123
Query: 169 VNSISVVG-----QVNPKVEIFTQARDCLL------PMGITSENVAQRFGVTRQEQDLAA 217
+ + ++ + D L MGIT+ENVA+++ V+R++QD A
Sbjct: 124 -KAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVA 182
Query: 218 VESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277
V S R A +G F EI+PV + + + D+ R + I ++KLKP
Sbjct: 183 VLSQNRTENAQKAGHFDKEIVPVLVS------TRKGLIEVKTDEFPRHGSNIEAMSKLKP 236
Query: 278 AFKKDGTT--TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIG 335
F DGT T NAS ++DGA AV+LMK+S A ++GL L S+S VGV+PS+MGIG
Sbjct: 237 YFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIG 296
Query: 336 PAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLG 395
P AI AV AG ++D+++FEINEAFA+ +K+LGL+PEKVN+ GGA+ALGHPLG
Sbjct: 297 PIPAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLG 356
Query: 396 ATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
A+G R + TLL ++R G+ GV ++CIG GMG A +R
Sbjct: 357 ASGCRILVTLLHTLERMGR--SRGVAALCIGGGMGIAMCVQR 396
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395 | Back alignment and structure |
|---|
Score = 376 bits (969), Expect = e-128
Identities = 133/400 (33%), Positives = 212/400 (53%), Gaps = 24/400 (6%)
Query: 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
+VVIV+A RT I G A L + ++ IEK + EV + +G VL G
Sbjct: 8 KEVVIVSATRTPIGSF-LGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGG 66
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
+A R A AG P + P T+N+ C+SG++A+ + ++ G D+ +A G+ESM+
Sbjct: 67 EGQA-PTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMS 125
Query: 169 VNSISVVGQVNPK---VEIF-TQARDCL------LPMGITSENVAQRFGVTRQEQDLAAV 218
N V+ + + V++ +D L + MG +EN A++ + R EQD A+
Sbjct: 126 -NVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNEQDAYAI 184
Query: 219 ESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278
S+ R+ AA +GKF +E+IPV + + +D + + KLK
Sbjct: 185 NSYTRSKAAWEAGKFGNEVIPVTVT------VKGQPDVVVKEDEEYKRVDFSKVPKLKTV 238
Query: 279 FKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPA 337
F+K+ GT TA NAS ++DGA A++LM A + + L +F+ V+P I P
Sbjct: 239 FQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPV 298
Query: 338 VAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGAT 397
A +K GL+ +DI ++E+NEAF+ + IK L +DP+KVN+NGGAV+LGHP+G +
Sbjct: 299 YAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMS 358
Query: 398 GARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437
GAR V L +K+ +G+ S+C G G +A + ++
Sbjct: 359 GARIVGHLTHALKQG----EYGLASICNGGGGASAMLIQK 394
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.8 bits (123), Expect = 3e-07
Identities = 62/445 (13%), Positives = 118/445 (26%), Gaps = 157/445 (35%)
Query: 41 YHRK---PAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVG 97
Y K F+D V KD D+ +L E+
Sbjct: 16 YQYKDILSVFEDAFV------------DNFDCKDVQ--DMPKSILSK---------EEID 52
Query: 98 DIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVAD-VATAIKAGLY 156
I++ + + LR S + V V ++ Y
Sbjct: 53 HIIM--------------------SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN-Y 91
Query: 157 DIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFG---VTRQEQ 213
+ + +++ Q + ++ + RD L N Q F V+R +
Sbjct: 92 KF-LMSPIKTEQR-------QPSMMTRMYIEQRDRL-------YNDNQVFAKYNVSRLQP 136
Query: 214 DLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRV-TISV----------DDG 262
R+A E+ P ++D G K + V D
Sbjct: 137 ----YLKLRQALL---------ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK 183
Query: 263 I---------RPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGL 313
I P T + L KL + T+ + ++S + ++ R L K
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243
Query: 314 P----IL------GVFRSFSAVGV-------DPSVMGIGPAVAIPAAVKSAGLQIDDINL 356
+L + +F+ + V + AA +
Sbjct: 244 ENCLLVLLNVQNAKAWNAFN-LSCKILLTTRFKQV-----TDFLSAATTTHISLDHHSMT 297
Query: 357 FEINEA---FASQYVYC-IKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR 412
+E +Y+ C + L P + V +P ++++E R
Sbjct: 298 LTPDEVKSLLL-KYLDCRPQDL---PRE-------VLTTNPR-------RLSIIAESIRD 339
Query: 413 GKDCRFG------------VISMCI 425
G + +I +
Sbjct: 340 GL-ATWDNWKHVNCDKLTTIIESSL 363
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 6e-05
Identities = 42/313 (13%), Positives = 76/313 (24%), Gaps = 60/313 (19%)
Query: 137 CSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQA-----RDC 191
C++ +++V I +G I I G + F
Sbjct: 1106 CATSVESVDIGVETILSGKARICIVGGYDDFQ--EEGSFE--------FGNMKATSNTLE 1155
Query: 192 LLPMGITSENVAQR-FGVTR--------------QEQDLAAVESHRRAAAATASGKFKDE 236
G T R TR + DLA + D+
Sbjct: 1156 EFEHGRTPAE-MSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDK 1214
Query: 237 IIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQV--- 293
I + P G+ + + + + ++ +++
Sbjct: 1215 I---GRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEAL 1271
Query: 294 -----SDGAG--AVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKS 346
+ L++R+ + + A+ +
Sbjct: 1272 KLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYK--RDPRIAPLRGALAT 1329
Query: 347 AGLQIDDINLF----------EINEAFASQYVYCIKKLGLDP-EKVNVNGGAVALGHPLG 395
GL IDD+ + + NE+ + K LG V GHP G
Sbjct: 1330 YGLTIDDLGVASFHGTSTKANDKNESATINEMM--KHLGRSEGNPVIGVFQKFLTGHPKG 1387
Query: 396 ATGA-RCVATLLS 407
A GA L
Sbjct: 1388 AAGAWMMNGALQI 1400
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-04
Identities = 19/156 (12%), Positives = 48/156 (30%), Gaps = 27/156 (17%)
Query: 294 SDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-------VDPSVMGIGPAVAIPAAVKS 346
+ GAG ++M+ LA++ G+PI G+ + P + A ++VK
Sbjct: 1180 AQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKY 1239
Query: 347 AGLQID--------DINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATG 398
A ++ +I + ++ + + +
Sbjct: 1240 ASPNLNMKYRKRQLVTREAQIKDWVENELEA-----------LKLEAEEIPSEDQNEFLL 1288
Query: 399 ARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAV 434
R + +E + + + + + A +
Sbjct: 1289 ER-TREIHNEAESQLRAAQQQWGNDFYKRDPRIAPL 1323
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 461 | |||
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 100.0 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 100.0 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 100.0 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 100.0 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 100.0 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 100.0 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 100.0 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 100.0 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 100.0 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 100.0 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 100.0 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 100.0 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 100.0 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 100.0 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 100.0 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 99.97 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 99.97 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 99.97 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 99.97 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 99.97 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 99.97 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 99.97 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 99.97 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 99.97 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 99.97 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 99.97 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 99.96 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.96 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 99.95 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 99.95 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.95 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.95 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.95 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.94 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.94 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.93 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 99.93 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.93 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.93 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.93 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.92 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.92 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.92 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.92 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.92 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.92 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.91 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 99.91 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.91 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.9 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.89 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.89 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.89 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.88 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.88 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.88 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.88 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.88 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.87 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.87 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.86 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.86 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 99.86 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.86 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 99.86 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.85 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.85 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 99.85 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.84 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.84 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 99.83 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.82 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 99.81 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 99.8 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 99.76 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.65 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 91.73 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 91.07 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 88.36 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 87.48 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 86.97 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 86.85 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 86.84 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 86.22 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 85.6 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 85.46 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 84.42 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 84.34 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 83.26 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 83.22 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 82.87 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 82.63 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 82.6 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 82.32 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 82.27 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 82.16 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 81.57 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 81.01 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 80.94 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 80.8 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 80.61 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 80.52 |
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-75 Score=601.06 Aligned_cols=424 Identities=79% Similarity=1.210 Sum_probs=357.3
Q ss_pred cccccCCCCCCCCCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHH
Q 012522 36 GEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMEC 115 (461)
Q Consensus 36 ~~~~~~~~~~~~~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a 115 (461)
|.+..++|..++|++|||||++||||++.++|+++++++.+|+.+|+++||+++|+++++||.|++|+..++...+++++
T Consensus 17 ~~~~~~~~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a 96 (442)
T 2wu9_A 17 GDSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASEC 96 (442)
T ss_dssp ---------CCGGGCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHH
T ss_pred CCcccCCcchhcCCCeEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHH
Confidence 44455666666788999999999999984348899999999999999999999999999999999999876542246788
Q ss_pred HHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccH
Q 012522 116 RMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPM 195 (461)
Q Consensus 116 ~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (461)
+.++..+|+|..+|+++|+++|+|+++||..|++.|++|++|++|++|+|.++..|+.......+.+......+....+|
T Consensus 97 ~~va~~lGl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~m 176 (442)
T 2wu9_A 97 RMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPM 176 (442)
T ss_dssp HHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCH
T ss_pred HHHHHHcCCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHH
Confidence 99999999976799999999999999999999999999999999999999999866532111111111111122234579
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhcc
Q 012522 196 GITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKL 275 (461)
Q Consensus 196 g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~ 275 (461)
++++++|+++||+|||+||+|++++|++|..||++|+|++||+|++++.++.+.+.+...+++.||.+|+++|+|+|.++
T Consensus 177 g~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~ 256 (442)
T 2wu9_A 177 GVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKL 256 (442)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcC
Confidence 99999999999999999999999999999999999999999999987533322222234679999999999999999999
Q ss_pred CCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCcc
Q 012522 276 KPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIN 355 (461)
Q Consensus 276 ~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID 355 (461)
||+|+++|++|.+|||+++|||+|+||++++.|+++|.+|+++|.+++..+.+|..++.++..+++++|+++|++++|||
T Consensus 257 rpvfd~~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DId 336 (442)
T 2wu9_A 257 KPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDID 336 (442)
T ss_dssp CCSSCTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHTTCCGGGCC
T ss_pred CCccCCCCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchhcchHHHHHHHHHHHHcCCCHHHCC
Confidence 99999999999999999999999999999999999999999999999998888888888899999999999999999999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCC--CCEEEEEecccCcceeEE
Q 012522 356 LFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKD--CRFGVISMCIGSGMGAAA 433 (461)
Q Consensus 356 ~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~--~~~gl~~~~~g~G~g~A~ 433 (461)
+||+||+|+.+++.++|.||++..|+|++||++++|||.||||+++++++++||+++ + .+++|+++|.|||++.++
T Consensus 337 ~iE~h~aft~~~l~~~~~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~--~~~~~~glas~~~GGG~~~a~ 414 (442)
T 2wu9_A 337 LFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRR--GKDCRFGVVSMCIGTGMGAAA 414 (442)
T ss_dssp EEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--CTTCCEEEEEEEETTTEEEEE
T ss_pred EEEEeCCChHHHHHHHHHhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhcc--CCCCCEEEEEeecccchheEE
Confidence 999999999999999999999999999999999999999999999999999999998 6 899999999999999999
Q ss_pred EEEEccchhhhhcCCCCCcccccCCCCC
Q 012522 434 VFERGDCVDELCNARMVPTHTHLSKDAK 461 (461)
Q Consensus 434 v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (461)
+|++.+.++.+.+++.+-.+--||||++
T Consensus 415 v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (442)
T 2wu9_A 415 VFERGDGVDELRNARKVEAQGLLSKDAR 442 (442)
T ss_dssp EEEECSHHHHHHTC--------------
T ss_pred EEEeccccccCCCccchhhcccccccCC
Confidence 9999998999999999999999999984
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-70 Score=562.45 Aligned_cols=382 Identities=41% Similarity=0.617 Sum_probs=347.1
Q ss_pred CCCCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCC
Q 012522 46 AFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP 125 (461)
Q Consensus 46 ~~~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~ 125 (461)
|+|++|+|||++||||+| +.|.+++.++.+|+.+|+++||+++|+++++||.+++|++++++. .++.++.++..+|++
T Consensus 4 m~m~~v~Ivg~~rT~~~~-~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~-~~~~a~~v~~~lGl~ 81 (396)
T 4dd5_A 4 MNMREVVIASAARTAVGS-FGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGL-GQNIARQIALGAGIP 81 (396)
T ss_dssp --CCCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCC
T ss_pred CcCCcEEEEEcccCCeee-cCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCC-CchHHHHHHHHcCCC
Confidence 557899999999999998 568889999999999999999999999999999999999988876 788999999999998
Q ss_pred CCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc-----ccCCCh-----h-hhhhhcccccCcc
Q 012522 126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQVNP-----K-VEIFTQARDCLLP 194 (461)
Q Consensus 126 ~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~-----~~~~~~-----~-~~~~~~~~~~~~~ 194 (461)
..+|+++|+++|+|++++|..|++.|++|++|++||+|+|++|+.|+.. +..+.. . +.....++.....
T Consensus 82 ~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (396)
T 4dd5_A 82 VEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYH 161 (396)
T ss_dssp TTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEE
T ss_pred CCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccch
Confidence 7799999999999999999999999999999999999999999877632 111111 1 1111222333468
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhc
Q 012522 195 MGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAK 274 (461)
Q Consensus 195 ~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~ 274 (461)
|++++++|+++||+|||+||+|++++|++|.+|+++|+|++||+|++++.++ ...++++|+.+|+++|+|++.+
T Consensus 162 ~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~------~~~~~~~d~~~r~~~t~e~l~~ 235 (396)
T 4dd5_A 162 MGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRK------GDTVVDKDEYIKPGTTMEKLAK 235 (396)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----------CEEECSCSCCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCC------CceeecCcccccCCCCHHHHhh
Confidence 9999999999999999999999999999999999999999999999875432 1357999999999999999999
Q ss_pred cCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCc
Q 012522 275 LKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDI 354 (461)
Q Consensus 275 ~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DI 354 (461)
+||+|+|+|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++.....|..++.++..+++++|+++|++++||
T Consensus 236 ~~~v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dI 315 (396)
T 4dd5_A 236 LRPAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDI 315 (396)
T ss_dssp CCBSSSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGC
T ss_pred CCCccCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCCcccHHHHHHHHHHHHHcCCCHHHc
Confidence 99999999999999999999999999999999999999999999999999888888888889999999999999999999
Q ss_pred cEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEE
Q 012522 355 NLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAV 434 (461)
Q Consensus 355 D~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v 434 (461)
|+||+||+|+...+.+.|.||+++.|+|++||++++|||.|++|+++++++++||+++ +.++||+++|+|||+|.|++
T Consensus 316 d~ve~~d~f~~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~--~~~~gl~~~c~ggG~g~a~~ 393 (396)
T 4dd5_A 316 DLVEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR--DAKTGLATLCIGGGMGTTLI 393 (396)
T ss_dssp SEEEECCSBHHHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--TCSEEEEEEEETTTEEEEEE
T ss_pred CEEEecChHHHHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhc--CCCeEEEEEcccCCceeEEE
Confidence 9999999999999999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred EEE
Q 012522 435 FER 437 (461)
Q Consensus 435 ~~~ 437 (461)
||+
T Consensus 394 ~e~ 396 (396)
T 4dd5_A 394 VKR 396 (396)
T ss_dssp EEC
T ss_pred EeC
Confidence 985
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-70 Score=567.25 Aligned_cols=387 Identities=60% Similarity=0.970 Sum_probs=346.7
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
+++++|||++||||++.++|.+++.++.+|+.+|+++||+++|+++++||.|++|+.+++.. +++.++.++..+|++.+
T Consensus 29 ~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~-~~~~a~~~a~~lGl~~~ 107 (418)
T 2iik_A 29 AADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGA-GAIMARIAQFLSDIPET 107 (418)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGG-GHHHHHHHHHHTTCCTT
T ss_pred CCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccc-cccHHHHHHHHcCCCCC
Confidence 57899999999999986567889999999999999999999999999999999999887655 56788999999999767
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhC
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFG 207 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 207 (461)
+|+++|+++|+|+++||..|+++|++|++|++|++|+|.++..|+.....+.+.+.......+++.+|++++++++++||
T Consensus 108 ~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~g 187 (418)
T 2iik_A 108 VPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFG 187 (418)
T ss_dssp SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHHHHHTT
T ss_pred ceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999876532212212222111223445679999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCcccc
Q 012522 208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTA 287 (461)
Q Consensus 208 ~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~ 287 (461)
+|||+||+|++++|++|.+||++++|++||+|+++..++++ +.++..++++|+.+|+.+|+|++.++||+|+++|++|.
T Consensus 188 itre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~-~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~~t~ 266 (418)
T 2iik_A 188 ISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDK-GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTA 266 (418)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTT-SCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCCCCS
T ss_pred CCHHHHHHHHHHHHHHHHhChhcCccccceeeeeecccccc-CcccceeeecccCcCCCCCHHHHhhCCCcccCCCceee
Confidence 99999999999999999999999999999999987543332 33345689999999999999999999999999999999
Q ss_pred CCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHHH
Q 012522 288 GNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQY 367 (461)
Q Consensus 288 ~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~ 367 (461)
+|+++++|||+|+||++++.|+++|.+|+++|.+++..+.+|..++.++..+++++|+++|++++|||+||+||+|+.+.
T Consensus 267 ~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~vE~h~af~~~~ 346 (418)
T 2iik_A 267 GNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQA 346 (418)
T ss_dssp TTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEECCSBHHHH
T ss_pred ccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCCchhcchhHHHHHHHHHHHcCCCHHHCCeeeeeccchHHH
Confidence 99999999999999999999999999999999999998888888888899999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCC-EEEEEecccCcceeEEEEEEc
Q 012522 368 VYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCR-FGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 368 ~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~-~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+.++|.||+++.|||++||++++|||.|+||+++++++++||+++ +.+ +||+++|+|||+|.|++|++.
T Consensus 347 ~~~~~~lg~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~--~~~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 347 AYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRR--GKRAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp HHHHHHHTCCGGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--TSCEEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHcCCCccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhc--CCCeeeEEEEeeccchhheEEEecc
Confidence 999999999999999999999999999999999999999999999 887 999999999999999999975
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-70 Score=561.25 Aligned_cols=381 Identities=43% Similarity=0.642 Sum_probs=345.1
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHc-CCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE 126 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~a-gl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~ 126 (461)
|++|+|||++||||+|..+|++++.++.+|+.+|+++||+++ |+++++||.+++|++.+++.++++.++.++..+|+|.
T Consensus 1 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~ 80 (387)
T 3goa_A 1 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPH 80 (387)
T ss_dssp CCCEEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCT
T ss_pred CCcEEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCC
Confidence 468999999999999854488999999999999999999999 9999999999999988876546789999999999987
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHh
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRF 206 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 206 (461)
.+|+++|+++|+|++++|.+|++.|++|++|++|++|+|+||+.|+.....+.+.+ ..+.++. ...|++++++|+++|
T Consensus 81 ~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~-~~~~~~~-~~~~g~~a~~~~~~~ 158 (387)
T 3goa_A 81 SVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGL-SRNVAKA-AGMMGLTAEMLSRLH 158 (387)
T ss_dssp TSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTC-C--------CCCHHHHHHHHHHT
T ss_pred CCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCccc-ccccccc-cccHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999987764211122211 1111222 567999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-CCcc
Q 012522 207 GVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTT 285 (461)
Q Consensus 207 g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~g~l 285 (461)
|++||+||+|++++|++|.+|+++|+|++||+|++++.++ .+..+++.|+.+|+++|+|+|.++||+|+| +|++
T Consensus 159 g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~-----~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~ 233 (387)
T 3goa_A 159 GISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDAD-----GVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTV 233 (387)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTT-----SCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeecccc-----CcccccccccccCCCCCHHHHhcCCCcccCCCCce
Confidence 9999999999999999999999999999999999875432 223579999999999999999999999999 9999
Q ss_pred ccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChH
Q 012522 286 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFAS 365 (461)
Q Consensus 286 t~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~ 365 (461)
|.+|||+++|||+++||++++.|++++.+|+++|.+++..+..|..++.++..+++++|+++|++++|||+||+||+|+.
T Consensus 234 t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~ve~h~~f~~ 313 (387)
T 3goa_A 234 TAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAA 313 (387)
T ss_dssp CGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTSTTCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHH
T ss_pred ecccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEEeCcchH
Confidence 99999999999999999999999999999999999999998889888899999999999999999999999999999999
Q ss_pred HHHHHHHHcCC---CCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 366 QYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 366 ~~~~~~e~LGl---~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.+.+.|.||+ +..|+|++||++++|||.|+||+++++++++||+++ +.++||+++|+|||+|.|++||+
T Consensus 314 ~~~~~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~--~~~~gl~~~c~ggG~g~a~~~e~ 386 (387)
T 3goa_A 314 QILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK--DAQFGLATMCIGLGQGIATVFER 386 (387)
T ss_dssp HHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhc--CCCEEEEEeccCcCceEEEEEEe
Confidence 99999999999 557899999999999999999999999999999999 99999999999999999999986
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-69 Score=557.22 Aligned_cols=380 Identities=41% Similarity=0.629 Sum_probs=340.2
Q ss_pred CcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCC
Q 012522 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (461)
Q Consensus 49 ~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~ 128 (461)
++|+|||++||||+| +.|.+++.++.+|+.+|+++||+++|+++++||.|++|+..+++.++++.++.++..+|++..+
T Consensus 2 ~~v~Ivg~~rT~~~~-~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 80 (401)
T 1ulq_A 2 PEAWIVEAVRTPIGK-HGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEV 80 (401)
T ss_dssp -CEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTC
T ss_pred CceEEEEcccCCccc-cCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCc
Confidence 589999999999998 6688899999999999999999999999999999999998776543578899999999997678
Q ss_pred CeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc-----ccCCCh-hhhhh------hcc--cc--cC
Q 012522 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQVNP-KVEIF------TQA--RD--CL 192 (461)
Q Consensus 129 ~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~-----~~~~~~-~~~~~------~~~--~~--~~ 192 (461)
|+++++++|+|+++||..|++.|++|++|++|++|+|+++..|+.. +..+.. .+.+. +.. ++ ..
T Consensus 81 p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 160 (401)
T 1ulq_A 81 AGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGT 160 (401)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCC
T ss_pred cEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhcccccccccccccc
Confidence 9999999999999999999999999999999999999999866521 111110 01000 000 01 12
Q ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHH
Q 012522 193 LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL 272 (461)
Q Consensus 193 ~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l 272 (461)
.+|++++++|+++||+|||++|+|++++|++|.+||++|+|++||+|++++.++ + +.++++||.+|+++|+|++
T Consensus 161 ~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~---~---~~~~~~d~~~r~~~t~e~~ 234 (401)
T 1ulq_A 161 ESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGK---E---EILVEQDEGPRRDTSLEKL 234 (401)
T ss_dssp CCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETT---E---EEEECSCSCCCTTCCHHHH
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCC---C---ceeeccccccCCCCCHHHH
Confidence 458999999999999999999999999999999999999999999999874321 1 2579999999999999999
Q ss_pred hccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCC
Q 012522 273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQID 352 (461)
Q Consensus 273 ~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~ 352 (461)
.++||+|+++|++|.+|||+++|||+|+||++++.|+++|.+|+++|.+++..+.+|..++.++..+++++|+++|++++
T Consensus 235 ~~~rpif~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~ 314 (401)
T 1ulq_A 235 AALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFS 314 (401)
T ss_dssp HHSCBSSSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGG
T ss_pred hhCCCccCCCCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCccccchhHHHHHHHHHHHcCCCHH
Confidence 99999999999999999999999999999999999999999999999999999888888888999999999999999999
Q ss_pred CccEEEecCCChHHHHHHHHHcCC--CCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcce
Q 012522 353 DINLFEINEAFASQYVYCIKKLGL--DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMG 430 (461)
Q Consensus 353 DID~~eiheafa~~~~~~~e~LGl--~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g 430 (461)
|||+||+||+|+.+++.++|.||+ +..|+|++||++++|||.|+||+++++++++||+++ +.+++|+++|+|||++
T Consensus 315 dId~ie~heafa~~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~--~~~~gl~~~~~ggG~~ 392 (401)
T 1ulq_A 315 DLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR--KVQFGLATMCIGVGQG 392 (401)
T ss_dssp GCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEETTTEE
T ss_pred HcCEEEEecchHHHHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhc--CCCEEEEEeecCCccc
Confidence 999999999999999999999999 457899999999999999999999999999999999 8999999999999999
Q ss_pred eEEEEEE
Q 012522 431 AAAVFER 437 (461)
Q Consensus 431 ~A~v~~~ 437 (461)
.+++|++
T Consensus 393 ~a~v~~~ 399 (401)
T 1ulq_A 393 IAVVVEG 399 (401)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999987
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-69 Score=556.94 Aligned_cols=380 Identities=41% Similarity=0.644 Sum_probs=348.7
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
|++|+|||++||||+| +.|.+++.++.+|+.+|+++||+++|+++++||.+++|++.+++. ++++++.++..+|++.+
T Consensus 4 m~~v~Ivg~~rT~~~~-~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~-~~~~a~~i~~~lGl~~~ 81 (394)
T 3ss6_A 4 MHNVVITAAVRSPIGT-FGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTD-EANTARTAALAAGFPDT 81 (394)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGG-GCSHHHHHHHHTTCCTT
T ss_pred CceEEEEEcccCCccc-cCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCc-cchHHHHHHHHcCCCCC
Confidence 6799999999999998 568889999999999999999999999999999999999988775 78899999999999877
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc-----ccCCC-----hhhhhhhcccccCccHHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQVN-----PKVEIFTQARDCLLPMGI 197 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~-----~~~~~-----~~~~~~~~~~~~~~~~g~ 197 (461)
+|+++|+++|+|++++|.+|++.|++|++|++|++|+|++|..|+.. +..+. +.+.....++.....|++
T Consensus 82 ~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 161 (394)
T 3ss6_A 82 VTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMGE 161 (394)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCCBHHH
T ss_pred ceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccchHHH
Confidence 99999999999999999999999999999999999999999877632 21111 111111223344568999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCC
Q 012522 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (461)
Q Consensus 198 ~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~p 277 (461)
++++|+++||++||+||+|++++|++|.+||++|+|++||+|++++.++ .+.++++|+.+|+++|+|++.+++|
T Consensus 162 ~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~------~~~~~~~d~~~R~~~t~e~~~~~~p 235 (394)
T 3ss6_A 162 TAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERR------KEVVFSKDEHPRADITAEKLAGLKP 235 (394)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSS------CEEEECSCCCCCTTCCHHHHHTCCB
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCC------CceeecccccccCCCCHHHHhhCCC
Confidence 9999999999999999999999999999999999999999999875432 1257999999999999999999999
Q ss_pred CCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 278 vf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
+|+|+|++|.+|+|+++|||+++||++++.|++++.+|+++|.+++..+.+|..++.++..+++++|+++|++++|||+|
T Consensus 236 vf~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~v 315 (394)
T 3ss6_A 236 AFRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAPAIRKGLEKVDWSLEDADLL 315 (394)
T ss_dssp SSSTTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEE
T ss_pred ccCCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCccchHHHHHHHHHHHHHcCCCHHHcCEE
Confidence 99999999999999999999999999999999999999999999999888888888889999999999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 358 EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 358 eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+||+|+...+.+.|.||++++|+|++||++++|||.|+||+++++++++||+++ +.+++|+++|+|||+|.|++||+
T Consensus 316 e~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~--~~~~gl~~~c~ggG~g~a~~~e~ 393 (394)
T 3ss6_A 316 EINEAFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRR--GLEKGIASLCVGGGIGVALFIEA 393 (394)
T ss_dssp EECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEETTTEEEEEEEEE
T ss_pred EeCCchHHHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhc--CCCEEEEEEccCcCceeEEEEEc
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999999999999997
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-70 Score=557.96 Aligned_cols=376 Identities=51% Similarity=0.804 Sum_probs=338.1
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcC----CCcCCcCeEEEEeecCCCCccchHHHHHHHHcC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR----LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAG 123 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~ag----l~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lG 123 (461)
|++|+|||++||||+|.++|.+++.++.+|+.+|+++||+++| +++++||.|++|+..++.. ++++++.++..+|
T Consensus 9 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~-~~~~a~~va~~lG 87 (393)
T 1afw_A 9 PEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGA-GATEHRAACLASG 87 (393)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGG-GHHHHHHHHHHTT
T ss_pred CCCEEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCC-CChHHHHHHHHcC
Confidence 7899999999999998325889999999999999999999999 9999999999999887665 6788999999999
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccC---CChhhhhhhcccccCccHHHHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ---VNPKVEIFTQARDCLLPMGITSE 200 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~a~ 200 (461)
++..+|+++|+++|+|+++||..|++.|++|++|++|++|+|.++..|+..... ..+.+......+..+..|++.++
T Consensus 88 l~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~ 167 (393)
T 1afw_A 88 IPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNE 167 (393)
T ss_dssp CCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHHHHH
T ss_pred CCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHHHHHH
Confidence 976789999999999999999999999999999999999999998766531111 11111111111223467999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCC
Q 012522 201 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280 (461)
Q Consensus 201 ~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~ 280 (461)
+|+++||+|||+||+|++++|++|.+||++|+|++||+|++++. | + ++++||.+|+++|+|++.++||+|+
T Consensus 168 ~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~-----~--~--~~~~d~~~r~~~t~e~~~~~rpvf~ 238 (393)
T 1afw_A 168 NVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD-----G--S--ICQSDEGPRPNVTAESLSSIRPAFI 238 (393)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT-----S--C--EECSCSSCCSCCCHHHHHHCCBSCC
T ss_pred HHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccC-----C--c--eeccccccCCCCCHHHHhcCCCccc
Confidence 99999999999999999999999999999999999999997632 2 1 7899999999999999999999998
Q ss_pred CC-CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEe
Q 012522 281 KD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI 359 (461)
Q Consensus 281 ~~-g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ei 359 (461)
++ |++|.+|||+++|||+++||++++.|+++|.+|+++|.+++..+.+|..++.++..+++++|+++|++++|||+||+
T Consensus 239 ~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~ 318 (393)
T 1afw_A 239 KDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEI 318 (393)
T ss_dssp ---CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred CCCCCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 88 99999999999999999999999999999999999999999998888888888999999999999999999999999
Q ss_pred cCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 360 NEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 360 heafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
||+|+.+++.++|.||++..|+|++||++++|||.|+||+++++++++||+++ +. |++++|+|||++.|++|++
T Consensus 319 h~~ft~~~l~~~~~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~--~~--gl~~~c~ggg~g~a~~~~~ 392 (393)
T 1afw_A 319 NEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKD--QI--GVVSMCIGTGMGAAAIFIK 392 (393)
T ss_dssp CCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTT--CE--EEEEEEETTTEEEEEEEEE
T ss_pred eccCHHHHHHHHHHhCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhc--CC--cEEEEeecccceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999998 55 9999999999999999997
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-69 Score=556.63 Aligned_cols=378 Identities=37% Similarity=0.574 Sum_probs=322.6
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE 126 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~-agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~ 126 (461)
+++|+|||++||||+|.+.|++++.++.+|+.+|+++||++ +|++++|||.+++|++.++..+++++++.++..+|+|.
T Consensus 6 ~~~v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~ 85 (407)
T 3svk_A 6 SEEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPE 85 (407)
T ss_dssp -CCEEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCT
T ss_pred CCCeEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCC
Confidence 46899999999999976789999999999999999999999 99999999999999988765435789999999999987
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccccc-CCChhhhhhhcccccCccHHHHHHHHHHH
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-QVNPKVEIFTQARDCLLPMGITSENVAQR 205 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 205 (461)
.+|+++|+++|+|++++|..|+++|++|++|++|++|+|+||+.|+.... .+. .......+....+|++++++++++
T Consensus 86 ~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~--~~~~~~~~~~~~~~g~~Ae~~a~~ 163 (407)
T 3svk_A 86 TTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWA--TDPETNYRIGFVPQGIGADLIATL 163 (407)
T ss_dssp TCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CC--CCTTTCCCCCCHHHHHHHHHHHHH
T ss_pred CCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccc--cCchhhccccccCHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999987763211 110 000112234456899999999999
Q ss_pred hCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCcc
Q 012522 206 FGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTT 285 (461)
Q Consensus 206 ~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~l 285 (461)
|+++||+||+|++.+|++|..+.+.|+|.+||+|++.+. | ..++++|+.+|+++|+|++.++||+|+|+|.+
T Consensus 164 ~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~-----g---~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v 235 (407)
T 3svk_A 164 EGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQN-----G---LVILDHDEHMRPDTTMEGLAKLKTAFDGVGEM 235 (407)
T ss_dssp HTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTT-----S---CEEECSCTTCCTTCCHHHHHTSCBSCC-----
T ss_pred hCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCC-----C---ceeeCCccccCCCCCHHHHhhCCCeecCCCcc
Confidence 999999999999999999999999999999999997421 1 24689999999999999999999999987765
Q ss_pred ---------------------ccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHH
Q 012522 286 ---------------------TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAV 344 (461)
Q Consensus 286 ---------------------t~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL 344 (461)
|.+|||+++|||+++||++++.|++++.+|+++|.+++..+.+|..++.++..+++++|
T Consensus 236 ~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al 315 (407)
T 3svk_A 236 GGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIMLTGPTPATRKVL 315 (407)
T ss_dssp --------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CCCTHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCccccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998888888899999999999
Q ss_pred HHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEec
Q 012522 345 KSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMC 424 (461)
Q Consensus 345 ~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~ 424 (461)
+++|++++|||+||+||+|+.+++.+.|.||++++|||++||++++|||+|+||+++++++++||+++ +.++||+++|
T Consensus 316 ~~Agl~~~dId~~e~hdaf~~~~l~~~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~--~~~~gl~~~c 393 (407)
T 3svk_A 316 DRAGLTIDDIDLFELNEAFASVVLKFQKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERR--NARRALITLC 393 (407)
T ss_dssp HHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH--TCCEEEEEEE
T ss_pred HHcCCCHHHCCEEEEeChhHHHHHHHHHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc--CCCEEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred ccCcceeEEEEEE
Q 012522 425 IGSGMGAAAVFER 437 (461)
Q Consensus 425 ~g~G~g~A~v~~~ 437 (461)
+|||++.|++||+
T Consensus 394 ~ggG~g~a~~~e~ 406 (407)
T 3svk_A 394 IGGGMGVATIIER 406 (407)
T ss_dssp CSSSCEEEEEEEE
T ss_pred ccCcceEEEEEEc
Confidence 9999999999997
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-68 Score=548.66 Aligned_cols=381 Identities=41% Similarity=0.638 Sum_probs=343.2
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
+++|||||++||||+| +.|.+++.++.+|+.+|+++||+++|+++++||.+++|++.++.. +++.++.++..+|++..
T Consensus 5 ~~~v~Ivg~~~tp~g~-~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~-~~~~a~~ia~~lgl~~~ 82 (397)
T 1wl4_A 5 SDPVVIVSAARTIIGS-FNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGC-GQNPVRQASVGAGIPYS 82 (397)
T ss_dssp CSCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCcEEEEEcccCCcee-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CCHHHHHHHHHcCCCCC
Confidence 5689999999999998 678899999999999999999999999999999999999887665 67899999999999767
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccc----cCCCh-h-hhhh--hcccccC--ccHHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV----GQVNP-K-VEIF--TQARDCL--LPMGI 197 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~----~~~~~-~-~~~~--~~~~~~~--~~~g~ 197 (461)
+|+++|+++|+|++.||..|++.|++|++|++|++|+|+|+..|+... ..+.. . +... ....+++ ..|++
T Consensus 83 ~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~ 162 (397)
T 1wl4_A 83 VPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGI 162 (397)
T ss_dssp SCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHH
T ss_pred ccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHH
Confidence 999999999999999999999999999999999999999997665321 11110 0 1000 0011222 56999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCC
Q 012522 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (461)
Q Consensus 198 ~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~p 277 (461)
.+++|+++||+|||+||+|++++|++|.+||..|+|++||+|++++.++ .+.++++|+.+|+++|+|++.++||
T Consensus 163 ~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~------~~~~~~~d~~~r~~~t~e~~~~~rp 236 (397)
T 1wl4_A 163 TAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRK------GLIEVKTDEFPRHGSNIEAMSKLKP 236 (397)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETT------EEEEECSCSCCCTTCCHHHHHTSCC
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCC------CceeeccccccCCCCCHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999875431 1257889999999999999999999
Q ss_pred CCCCC--CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCcc
Q 012522 278 AFKKD--GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIN 355 (461)
Q Consensus 278 vf~~~--g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID 355 (461)
+|+++ |++|.+|||+++|||+|+||++++.|++++.+|+++|.+++..+..|..++.++..+++++|+++|++++|||
T Consensus 237 vfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId 316 (397)
T 1wl4_A 237 YFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVD 316 (397)
T ss_dssp SSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCC
T ss_pred ccCCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecChhhccchHHHHHHHHHHHcCCCHHHCC
Confidence 99984 9999999999999999999999999999999999999999999888888888999999999999999999999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEE
Q 012522 356 LFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVF 435 (461)
Q Consensus 356 ~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~ 435 (461)
+||+||+|+.+.+.+.|.||+++.|+|++||++++|||.|+||+++++++++||+++ +.+++|+++|+|||++.|++|
T Consensus 317 ~ie~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~--~~~~gl~~~~~ggG~~~a~~~ 394 (397)
T 1wl4_A 317 IFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERM--GRSRGVAALCIGGGMGIAMCV 394 (397)
T ss_dssp EEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEETTTEEEEEEE
T ss_pred EEEEecccHHHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhc--CCCEEEEEEecccchheEEEE
Confidence 999999999999999999999999999999999999999999999999999999999 899999999999999999999
Q ss_pred EEc
Q 012522 436 ERG 438 (461)
Q Consensus 436 ~~~ 438 (461)
+++
T Consensus 395 e~~ 397 (397)
T 1wl4_A 395 QRE 397 (397)
T ss_dssp EEC
T ss_pred EeC
Confidence 973
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-68 Score=549.94 Aligned_cols=381 Identities=43% Similarity=0.618 Sum_probs=347.0
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
|++|+|||++||||+| +.|.+++.++.+|+.+|+++||+++|+++++||.+++|++.++.. ++++++.++..+|++..
T Consensus 4 m~~v~Ivg~~rT~~g~-~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~-~~~~a~~~~~~lGl~~~ 81 (395)
T 4e1l_A 4 MKDVVIVSAVRTPIGS-FGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGL-GQNVARQIAINAGIPNS 81 (395)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSST-TCCHHHHHHHHTTCCTT
T ss_pred CCeEEEEECccCCccc-cCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-cchHHHHHHHHcCCCCC
Confidence 6799999999999998 568889999999999999999999999999999999999987765 78899999999999878
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc-----ccCCCh-----hh-hhhhcccccCccHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQVNP-----KV-EIFTQARDCLLPMG 196 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~-----~~~~~~-----~~-~~~~~~~~~~~~~g 196 (461)
+|+++|+++|+|++++|..|++.|++|++|++||+|+|+||+.|+.. +..+.. .+ .....++.....|+
T Consensus 82 ~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (395)
T 4e1l_A 82 VPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMG 161 (395)
T ss_dssp SCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHH
T ss_pred ceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHH
Confidence 99999999999999999999999999999999999999999866521 111111 00 11112223335799
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccC
Q 012522 197 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK 276 (461)
Q Consensus 197 ~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~ 276 (461)
+.+++|+++||++||++|+|++++|++|.+|+++|+|++||+|++++.++ .+..++++|+.+|+++|+|++.+++
T Consensus 162 ~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~-----g~~~~~~~d~~~r~~~t~e~l~~~~ 236 (395)
T 4e1l_A 162 ITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRR-----GKIETIDKDEYPKLGMTFEGLSKLK 236 (395)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEET-----TEEEEECSCSCCCTTCCHHHHHHCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCC-----CcceEECCccccCCCCCHHHHhhCC
Confidence 99999999999999999999999999999999999999999999875432 1235789999999999999999999
Q ss_pred CCCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccE
Q 012522 277 PAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINL 356 (461)
Q Consensus 277 pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~ 356 (461)
|+|+++|++|.+|||+++|||+++||++++.|++++.+|+++|.+++....+|..++.++..+++++|+++|++++|||+
T Consensus 237 ~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ 316 (395)
T 4e1l_A 237 PAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDIDL 316 (395)
T ss_dssp BSSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGTTCTHHHHHHHHHHHTTCCGGGCSE
T ss_pred CccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCcchHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999999988888888889999999999999999999999
Q ss_pred EEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEE
Q 012522 357 FEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436 (461)
Q Consensus 357 ~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~ 436 (461)
||+||+|+...+.+.|.||++++|+|++||++++|||.|+||+++++++++||+++ +.+++++++|+|||+|.|++||
T Consensus 317 ve~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~--~~~~gl~~~c~ggG~g~a~~~e 394 (395)
T 4e1l_A 317 IEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKR--KVETGLATLCIGGGQGISMVVS 394 (395)
T ss_dssp EEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH--TCSEEEEEEESSTTEEEEEEEE
T ss_pred EEecChhHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc--CCCEEEEEEccCCCceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999 8999999999999999999998
Q ss_pred E
Q 012522 437 R 437 (461)
Q Consensus 437 ~ 437 (461)
+
T Consensus 395 ~ 395 (395)
T 4e1l_A 395 R 395 (395)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-68 Score=545.90 Aligned_cols=380 Identities=43% Similarity=0.638 Sum_probs=342.4
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
|++|+|||++||||+| +.|.+++.++.+|+.+|+++||+++|+++++||.+++|++.+... +++.++.++..+|++..
T Consensus 2 m~~v~Ivg~~~t~~g~-~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~-~~~~a~~ia~~lgl~~~ 79 (392)
T 2vu1_A 2 TPSIVIASAARTAVGS-FNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE-GQNPARQAAMKAGVPQE 79 (392)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCCEEEEEeeecCccc-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CcHHHHHHHHHcCCCCC
Confidence 5689999999999998 678899999999999999999999999999999999999887665 67899999999999655
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccc----cccCCC-----hh-hhhhhcccccCccHHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS----VVGQVN-----PK-VEIFTQARDCLLPMGI 197 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~----~~~~~~-----~~-~~~~~~~~~~~~~~g~ 197 (461)
+|+++++++|+|++.||..|++.|++|++|++|++|+|+|+..|+. .+..+. +. +......+.....|++
T Consensus 80 ~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (392)
T 2vu1_A 80 ATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGT 159 (392)
T ss_dssp SEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHH
T ss_pred ceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHH
Confidence 8999999999999999999999999999999999999999886652 111111 00 0000111122346999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCC
Q 012522 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (461)
Q Consensus 198 ~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~p 277 (461)
.+++|+++||+|||++|+|++++|++|.+||++|+|++||+|++.+.++ | ...+++||.+|+++|+|++.++||
T Consensus 160 ~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~---~---~~~f~~d~~~r~~~t~e~~~~~~~ 233 (392)
T 2vu1_A 160 TAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRK---G---DITVDADEYIRHGATLDSMAKLRP 233 (392)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTT---C---CEEECSCSSCCTTCCHHHHHTCCC
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCC---C---ceeeccccccCCCCCHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999864221 1 257899999999999999999999
Q ss_pred CCCCCCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 278 vf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
+|+++|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++..+..|..++.++..+++++|+++|++++|||+|
T Consensus 234 v~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~i 313 (392)
T 2vu1_A 234 AFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLV 313 (392)
T ss_dssp SSCTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEE
T ss_pred ccCCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecChhhcchhHHHHHHHHHHHcCCCHHHcCEE
Confidence 99999999999999999999999999999999999999999999999888888888899999999999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 358 EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 358 eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+||+|+.+.+.+.|.||+++.|+|++||++++|||.|+||+++++++++||+++ +.+++|+++|+|||++.|++|++
T Consensus 314 e~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~--~~~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 314 EANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR--GARKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp EECCSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH--TCSEEEEEEEETTTEEEEEEEEC
T ss_pred EeccccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc--CCCEEEEEEecccchheEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999 89999999999999999999986
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-68 Score=543.54 Aligned_cols=382 Identities=41% Similarity=0.614 Sum_probs=343.1
Q ss_pred CCCCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHc-CCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCC
Q 012522 46 AFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF 124 (461)
Q Consensus 46 ~~~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~a-gl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl 124 (461)
|+|++|+|||++||||+|.++|.+++.++.+|+.+|+++||+++ |+++++||.+++|+..+++..+++.++.++..+|+
T Consensus 2 ~~m~~v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl 81 (390)
T 1wdk_C 2 LNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQI 81 (390)
T ss_dssp CCTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSS
T ss_pred CCCCcEEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCC
Confidence 34679999999999999832688999999999999999999999 99999999999999877654357789999999999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCC-ChhhhhhhcccccCccHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV-NPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
+.++|.++++++|+|++.||..|++.|++|++|++|++|+|.++..|+... .+ ...+... .++.+.+|++++++|+
T Consensus 82 ~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~-~~~~~~~~~~--~~~~~~~~g~~a~~~~ 158 (390)
T 1wdk_C 82 PHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHG-VDPNPHMSLY--AAKASGMMGLTAEMLG 158 (390)
T ss_dssp CTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTT-BCCCGGGGGT--SCGGGGSHHHHHHHHH
T ss_pred CCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccc-cccCcccccc--CCcchhHHHHHHHHHH
Confidence 778999999999999999999999999999999999999999987665321 11 1112111 1333456999999999
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-C
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-D 282 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~ 282 (461)
++||+|||++|+|++++|++|.+|+++|+|.+||+|++.+.+. .+...+++||++|+++|+|++.++||+|+| +
T Consensus 159 ~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~-----~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~ 233 (390)
T 1wdk_C 159 KMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDEN-----GFLKIFDYDETIRPDTTLESLAALKPAFNPKG 233 (390)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTT-----CCEEEECSCTTCCTTCCHHHHHTSCCSSCTTT
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCC-----CcceeeccccccCCCCCHHHHhcCCCcccCCC
Confidence 9999999999999999999999999999999999998752110 011468999999999999999999999999 9
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCC
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEA 362 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eihea 362 (461)
|++|++|||+++|||+|+||++++.|++++.+|+++|.+++..+.+|..++.++..+++++|+++|++++|||+||+||+
T Consensus 234 G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~ 313 (390)
T 1wdk_C 234 GTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEA 313 (390)
T ss_dssp CCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCS
T ss_pred CcEechhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCChhhCcEEEeccC
Confidence 99999999999999999999999999999999999999999988888888888999999999999999999999999999
Q ss_pred ChHHHHHHHHHcCCC---CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 363 FASQYVYCIKKLGLD---PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 363 fa~~~~~~~e~LGl~---~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+.+.+.+.|.||++ ..|+|++||++++|||.|+||+++++++++||+++ +.+++|+++|+|||++.|++|++
T Consensus 314 f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~--~~~~gl~~~~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 314 FAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN--GGTFGLSTMCIGLGQGIATVFER 389 (390)
T ss_dssp BHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEETTTEEEEEEEEC
T ss_pred CHHHHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhc--CCCEEEEEecccchheEEEEEEe
Confidence 999999999999999 67999999999999999999999999999999999 89999999999999999999986
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-64 Score=518.18 Aligned_cols=378 Identities=34% Similarity=0.522 Sum_probs=337.3
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
+++|+|||++||||+| +.|.+++.++.+|+.+|+++||+++|+++++||.+++|+..++.. +++.++.++..+|++.+
T Consensus 7 ~~~v~Ivg~~rTp~g~-~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~-~~~~a~~va~~lgl~~~ 84 (395)
T 2ib8_A 7 LKEVVIVSATRTPIGS-FLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGE-GQAPTRQAVLGAGLPIS 84 (395)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCCeEEEecccccccc-cCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CchHHHHHHHHcCCCCC
Confidence 5789999999999998 568888999999999999999999999999999999999887766 78899999999999767
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccccc---CCC-----hh-hhhhhcccccCccHHHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG---QVN-----PK-VEIFTQARDCLLPMGIT 198 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~---~~~-----~~-~~~~~~~~~~~~~~g~~ 198 (461)
+|+++++++|+|++.||..|++.|++|++|++|++|+|.++..|+.... .+. +. ......+.....+|+++
T Consensus 85 ~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~ 164 (395)
T 2ib8_A 85 TPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSC 164 (395)
T ss_dssp CCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEEHHHH
T ss_pred ceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccchHHHH
Confidence 9999999999999999999999999999999999999999986652110 010 00 00111122234579999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCC
Q 012522 199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278 (461)
Q Consensus 199 a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pv 278 (461)
+++|+++||+|||++++|++++|+||.+|+++++|++||.|+++..+. .++.+++.||.+| ++++|++.++||+
T Consensus 165 a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~-----~p~~~~~~D~~~r-~~~~~~l~~l~~~ 238 (395)
T 2ib8_A 165 AENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKG-----QPDVVVKEDEEYK-RVDFSKVPKLKTV 238 (395)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTT-----SCCEEECSCSGGG-SCCTTTGGGSCCT
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccC-----Ccceeeccccccc-cCCHHHHhcCCcc
Confidence 999999999999999999999999999999999999999999874320 1135789999999 5899999999999
Q ss_pred CCC-CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 279 FKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 279 f~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
|.+ +|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++..+.+|..++.++..+++++|+++|++++|||+|
T Consensus 239 f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~i 318 (395)
T 2ib8_A 239 FQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIAMW 318 (395)
T ss_dssp TCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccChhhccccHHHHHHHHHHHcCCCHHHcCEE
Confidence 954 8999999999999999999999999999999999999999998877887777888999999999999999999999
Q ss_pred EecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 358 EINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 358 eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+||+|+.+.+..+|.||+++.|+|++||++++|||.|+||+++++++++|||+ +++|++++|+|||++.|++|++
T Consensus 319 e~~D~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~----~~~gl~~~~~ggG~g~a~~~~~ 394 (395)
T 2ib8_A 319 EVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ----GEYGLASICNGGGGASAMLIQK 394 (395)
T ss_dssp EECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT----TCEEEEEEEETTTEEEEEEEEE
T ss_pred EEccccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh----CCceEEEEecccCHhheEEEEc
Confidence 999999999999999999999999999999999999999999999999999985 4789999999999999999997
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-55 Score=462.53 Aligned_cols=381 Identities=14% Similarity=0.125 Sum_probs=296.5
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCC-----------ccchHHH
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS-----------TRAMECR 116 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~-----------~~~~~a~ 116 (461)
++++||||+++||+.+ .+|.+++.++.||+.+|+++||+|+||++++||.+|.|++..... ...+.++
T Consensus 17 PRtPVIVGvG~t~~r~-~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~ 95 (520)
T 4egv_A 17 PRTPVIVGVGQFTERI-DLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPR 95 (520)
T ss_dssp TTCEEEEEEEEEEC---------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHH
T ss_pred CCCeEEEEeeeccccC-CCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHH
Confidence 6789999999999975 568889999999999999999999999999999888776543221 1346788
Q ss_pred HHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccccc--CCChhhhhhhcccccCcc
Q 012522 117 MAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG--QVNPKVEIFTQARDCLLP 194 (461)
Q Consensus 117 ~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~--~~~~~~~~~~~~~~~~~~ 194 (461)
.++..+|++ ..+.++++.+|+|++++|..|++.|++|++|++|++|+|+||+.|+.... .............+....
T Consensus 96 ~va~~lGl~-~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (520)
T 4egv_A 96 SVARNIGAD-PAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYG 174 (520)
T ss_dssp HHHHHHTCC-CSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------
T ss_pred HHHHHcCCC-CceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccc
Confidence 999999996 47889999999999999999999999999999999999999997763211 111111111112233446
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhc
Q 012522 195 MGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAK 274 (461)
Q Consensus 195 ~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~ 274 (461)
++..++.+..+||+++++++.++..++.++......+.|++||.|+.++.. +....++|+.+|+++|+|++.+
T Consensus 175 ~~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~-------~~a~~np~a~~r~~~t~E~l~~ 247 (520)
T 4egv_A 175 YDGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFS-------KVAAKNPYSSAPTERSVEELLT 247 (520)
T ss_dssp ------CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH-------HHHHHCTTSSSCCCCCHHHHHS
T ss_pred cchhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecc-------cccccCccccccCCCCHHHhcc
Confidence 777788899999999999999999999999988888889999999877542 2234677889999999999999
Q ss_pred cCCCCCC--CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCC--------CCcHHHHHHHHH
Q 012522 275 LKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM--------GIGPAVAIPAAV 344 (461)
Q Consensus 275 ~~pvf~~--~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~--------~~~~~~ai~~aL 344 (461)
++|.|.+ +++.|.+|||+++|||+|+||++++.|+++|++|+++|.+++....++..+ +.++..+++++|
T Consensus 248 l~p~~r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al 327 (520)
T 4egv_A 248 VTASNRMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEAL 327 (520)
T ss_dssp CCSSSCEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHH
T ss_pred cCcccccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHH
Confidence 9998865 788899999999999999999999999999999998888888776554433 335678999999
Q ss_pred HHcCCCCCCccEEEecCCChHHHHHHHHHcCCCC---CCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEE
Q 012522 345 KSAGLQIDDINLFEINEAFASQYVYCIKKLGLDP---EKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVI 421 (461)
Q Consensus 345 ~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~---~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~ 421 (461)
+++||+++|||+||+||||+++.+.++|.|||+. .|+|++||++++|||.+++|++.++++++|||++ ..+++|+
T Consensus 328 ~~agl~~~did~~E~~dAF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~--~~~~~L~ 405 (520)
T 4egv_A 328 RVAGIGLDDVAAFDLYSCFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDK--PGQFALV 405 (520)
T ss_dssp HHHTCCGGGEEEEEECCSSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHS--TTCEEEE
T ss_pred HHhCCCHHHCCEEEEeCCcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcC--CCCceEE
Confidence 9999999999999999999999999999999964 5899999999999999999999999999999999 8899999
Q ss_pred EecccCcc-eeEEEEEEcc
Q 012522 422 SMCIGSGM-GAAAVFERGD 439 (461)
Q Consensus 422 ~~~~g~G~-g~A~v~~~~~ 439 (461)
+.++|-.. ..+++|.++.
T Consensus 406 ~~~gg~~~~~~~~~l~~~~ 424 (520)
T 4egv_A 406 GANGGIASKYSVGIYSTEP 424 (520)
T ss_dssp EEEETTTTEEEEEEEESSC
T ss_pred eCCCCeeeeeeEEEEcCCC
Confidence 86544433 3556666553
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-32 Score=281.31 Aligned_cols=270 Identities=19% Similarity=0.253 Sum_probs=208.8
Q ss_pred HHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC-----------c--------------cchHHHHHHHHcCCCC
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-----------T--------------RAMECRMAAFYAGFPE 126 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~-----------~--------------~~~~a~~ia~~lGl~~ 126 (461)
+|+.+++++||+++|+++++|| .|++|+..++.. . ....+..++..+|+
T Consensus 79 ~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl-- 156 (416)
T 1e5m_A 79 HFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA-- 156 (416)
T ss_dssp HHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCC--
Confidence 8999999999999999999999 799998765410 0 12468889999999
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccc-cccccccccCCChhhhhhhcccccCccHHHHHHHHHHH
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM-TVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQR 205 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 205 (461)
++|+++|+++|+|++.||..|++.|++|++|++||+|+|.+ +...+ .+
T Consensus 157 ~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~----------------------~~--------- 205 (416)
T 1e5m_A 157 KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSY----------------------AG--------- 205 (416)
T ss_dssp CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHH----------------------HH---------
T ss_pred CCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHH----------------------HH---------
Confidence 57999999999999999999999999999999999999985 43110 00
Q ss_pred hCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CC
Q 012522 206 FGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DG 283 (461)
Q Consensus 206 ~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g 283 (461)
+. ..+.+.. ++. ++++ .++| |+. +|
T Consensus 206 ---------------~~------~~~~ls~-------~~~------------~p~~------------~~rp-fd~~~~G 232 (416)
T 1e5m_A 206 ---------------FA------SARALSF-------RND------------DPLH------------ASRP-FDKDRDG 232 (416)
T ss_dssp ---------------HH------HTTCBCC-------CTT------------CGGG------------TCCT-TBTTCCS
T ss_pred ---------------HH------HcCCccC-------CCC------------CCcc------------cccc-CccCCCC
Confidence 00 0011100 000 0111 3455 664 56
Q ss_pred ccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccC-----CCCCCCcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 284 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
++ ++|||+++||++.+.|+++|.+++++|.+++..... |...+.+...+++++|+++|++++|||+||
T Consensus 233 ~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve 305 (416)
T 1e5m_A 233 FV-------MGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYIN 305 (416)
T ss_dssp BC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred ce-------eeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEE
Confidence 66 999999999999999999999999999999887643 444556678999999999999999999999
Q ss_pred ecCCChHH----HHH-HHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-------------------CC
Q 012522 359 INEAFASQ----YVY-CIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-------------------GK 414 (461)
Q Consensus 359 iheafa~~----~~~-~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-------------------~~ 414 (461)
+|++++.. +.. ..+.+|....++++++.+..+|||.||+|+.++++++++|+++ ++
T Consensus 306 ~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~ 385 (416)
T 1e5m_A 306 AHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVP 385 (416)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCB
T ss_pred EECCCCcCcCHHHHHHHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC
Confidence 99998862 222 2344555445678888888899999999999999999999986 11
Q ss_pred ------CCCEEEEEecccCcceeEEEEEEc
Q 012522 415 ------DCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 415 ------~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+.+++++++++.||.+.++||++.
T Consensus 386 ~~~~~~~~~~a~~~sfGfGG~n~~~vl~~~ 415 (416)
T 1e5m_A 386 GQSRALIVDVALSNSFGFGGHNVTLAFKKY 415 (416)
T ss_dssp SSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CccccCCCCEEEEccccCCCeeEEEEEEeC
Confidence 347889988877888889998763
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-32 Score=279.69 Aligned_cols=272 Identities=20% Similarity=0.253 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCC-----------------C--------ccchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPG-----------------S--------TRAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~-----------------~--------~~~~~a~~ia~~lGl 124 (461)
..+|+.+|+++||+++|+++++|| .|++|+..+.. . .....+..++..+|+
T Consensus 74 ~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 153 (413)
T 3o04_A 74 FTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGA 153 (413)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCC
Confidence 356999999999999999999999 99999864211 0 011247789999999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
++|+++|+++|+|+++||..|+++|++|++|++||+|+|.+..... .
T Consensus 154 --~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~------------------------~------- 200 (413)
T 3o04_A 154 --KGINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMS------------------------L------- 200 (413)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHH------------------------H-------
T ss_pred --CCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHH------------------------H-------
Confidence 5799999999999999999999999999999999999999655100 0
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--C
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D 282 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~ 282 (461)
..+. ..+.+.. . .+++. .++| |+. +
T Consensus 201 --------------~~~~------~~~~ls~--------~------------~~p~~------------~~~p-fd~~~~ 227 (413)
T 3o04_A 201 --------------AGFT------ANKALSL--------N------------PDPET------------ACRP-FDKDRD 227 (413)
T ss_dssp --------------HHHH------HTTCBCC--------C------------CCTTT------------SCCT-TBTTCC
T ss_pred --------------HHHH------hcccccC--------C------------CCCCC------------CcCC-CcCCCC
Confidence 0000 0001100 0 00111 2445 554 5
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
|++ ++|||+|+||++.+.|++++.+++++|.+++.... .|...+.++..+++++|+++|++++|||+|
T Consensus 228 g~~-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v 300 (413)
T 3o04_A 228 GFI-------IGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYI 300 (413)
T ss_dssp SBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred Cce-------EeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEE
Confidence 666 99999999999999999999999999999987653 344445567899999999999999999999
Q ss_pred EecCCChH----HHHHHH-HHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C------------------
Q 012522 358 EINEAFAS----QYVYCI-KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G------------------ 413 (461)
Q Consensus 358 eiheafa~----~~~~~~-e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~------------------ 413 (461)
|+|..++. .+...+ +.++....++|+++++..+|||.||+|+.++++++++|+++ +
T Consensus 301 e~HgtgT~~~d~~e~~al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 380 (413)
T 3o04_A 301 NAHGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYV 380 (413)
T ss_dssp ECCCCCCHHHHHHHHHHHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSCCC
T ss_pred EEeCCcCcccCHHHHHHHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCcccC
Confidence 99999886 222222 23455556899999999999999999999999999999976 1
Q ss_pred ------CCCCEEEEEecccCcceeEEEEEEc
Q 012522 414 ------KDCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 414 ------~~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
.+.+++++++++.||.+.++||++.
T Consensus 381 ~~~~~~~~~~~~~~~sfgfgG~na~~vl~~~ 411 (413)
T 3o04_A 381 PNEAREANVNVVISNSFGFGGHNATLVFKRI 411 (413)
T ss_dssp BSSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCcccCCCCCEEEEeCccCCceEEEEEEEeC
Confidence 1357899999888999999999875
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-33 Score=287.12 Aligned_cols=273 Identities=20% Similarity=0.273 Sum_probs=212.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCC-cC----eEEEEeecCC--------------------------CCccchHHHHHHHHc
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSE-VG----DIVVGTVLAP--------------------------GSTRAMECRMAAFYA 122 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~-Id----~vi~g~~~~~--------------------------~~~~~~~a~~ia~~l 122 (461)
..+|+.+|+++||+++|+++++ || .+++|+..+. .. ....+..++..+
T Consensus 87 ~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~~is~~l 165 (428)
T 3kzu_A 87 FIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRL-INLASGHVSIKH 165 (428)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTC-TTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccch-hhhHHHHHHHHc
Confidence 4689999999999999999998 88 6888875321 11 234677899999
Q ss_pred CCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHH
Q 012522 123 GFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENV 202 (461)
Q Consensus 123 Gl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 202 (461)
|+ ++|+++|+++|+|++.||..|++.|++|++|++||+|+|.+.... .
T Consensus 166 gl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~------------------------~------ 213 (428)
T 3kzu_A 166 KL--RGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRI------------------------S------ 213 (428)
T ss_dssp TC--CSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHH------------------------H------
T ss_pred CC--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHH------------------------H------
Confidence 99 579999999999999999999999999999999999999854400 0
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-
Q 012522 203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK- 281 (461)
Q Consensus 203 ~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~- 281 (461)
+..|. + .+.+. .+. ..+.-..++| |+.
T Consensus 214 ----------~~~~~---------~--~~~ls------------------------~~~------~~~~~~~~~p-fd~~ 241 (428)
T 3kzu_A 214 ----------LAGFA---------A--CKALS------------------------TER------NDDPTAASRP-YDED 241 (428)
T ss_dssp ----------HHHHH---------H--TTCBC------------------------CSC------TTSGGGTCCT-TBTT
T ss_pred ----------HHHHH---------H--ccccc------------------------cCc------cCCcccccCC-cccC
Confidence 00000 0 00010 000 0001123455 543
Q ss_pred -CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeec-----cCCCCCCCcHHHHHHHHHHHcCCCCCCcc
Q 012522 282 -DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAGLQIDDIN 355 (461)
Q Consensus 282 -~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~-----~~p~~~~~~~~~ai~~aL~~AGl~~~DID 355 (461)
+|++ ++|||+|+||++.+.|++++.+++++|.+++... ..|...+.++..+++++|+++|++++|||
T Consensus 242 ~~G~v-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId 314 (428)
T 3kzu_A 242 RDGFV-------MGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEID 314 (428)
T ss_dssp CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCC
T ss_pred CCcee-------ecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHee
Confidence 5666 8999999999999999999999999999998876 34555666788999999999999999999
Q ss_pred EEEecCCChH----HHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C-----------------
Q 012522 356 LFEINEAFAS----QYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G----------------- 413 (461)
Q Consensus 356 ~~eiheafa~----~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~----------------- 413 (461)
++|.|++++. ......+.++.+..++|++|++.++|||.||+|+.++++++++|+++ +
T Consensus 315 ~ve~HgtgT~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~ 394 (428)
T 3kzu_A 315 YINAHGTSTMADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDL 394 (428)
T ss_dssp EEECCCCSSTTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCCSSBC
T ss_pred EEEecCCcchhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCCCccc
Confidence 9999966663 33344455677778999999999999999999999999999999986 1
Q ss_pred -------CCCCEEEEEecccCcceeEEEEEEc
Q 012522 414 -------KDCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 414 -------~~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
.+.+++++++++.||.+.++||++-
T Consensus 395 ~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 426 (428)
T 3kzu_A 395 VPHKPRERKIDVALSNSFGFGGTNASLVLRRY 426 (428)
T ss_dssp CBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCcCCCCCEEEEeCcccChhhEEEEEeec
Confidence 1347889988888888999999864
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=283.42 Aligned_cols=272 Identities=19% Similarity=0.266 Sum_probs=215.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC-------------------------ccchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~-------------------------~~~~~a~~ia~~lGl 124 (461)
..+|+.+|+++||+++|+++++|| ++++|+..+... .....+..++..+|+
T Consensus 88 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 167 (427)
T 3ho9_A 88 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 167 (427)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCC
Confidence 357899999999999999999999 588887643210 012367789999999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++... ..
T Consensus 168 --~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~------------------------~~------- 214 (427)
T 3ho9_A 168 --RGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPL------------------------GV------- 214 (427)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHH------------------------HH-------
T ss_pred --CCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHH------------------------HH-------
Confidence 579999999999999999999999999999999999999997510 00
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--C
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D 282 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~ 282 (461)
..+. ..+.+. .+ ..+. -..++| |+. +
T Consensus 215 --------------~~~~------~~~~ls------------------------~~-----~~~~--~~~~~p-fd~~~~ 242 (427)
T 3ho9_A 215 --------------GGFG------AARALS------------------------TR-----NDNP--QAASRP-WDKERD 242 (427)
T ss_dssp --------------HHHH------HTTCBC------------------------CC-----TTCH--HHHCCT-TBTTCC
T ss_pred --------------HHHH------hccCcc------------------------cC-----CCCC--CcccCC-ccCCCC
Confidence 0000 000010 00 0001 114566 543 6
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
|++ ++|||+|+||++.+.|+++|.+++++|.+++.... .|...+.+...+++++|+++|++++|||+|
T Consensus 243 G~v-------~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~v 315 (427)
T 3ho9_A 243 GFV-------LGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYV 315 (427)
T ss_dssp SBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred Cce-------eeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEE
Confidence 777 99999999999999999999999999999987652 445556678899999999999999999999
Q ss_pred Eec-----CCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C------------------
Q 012522 358 EIN-----EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G------------------ 413 (461)
Q Consensus 358 eih-----eafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~------------------ 413 (461)
|+| +.+........+.++....++|+++++.++|||.||+|+.++++++++|+++ +
T Consensus 316 e~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 395 (427)
T 3ho9_A 316 NAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFV 395 (427)
T ss_dssp ECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCBCC
T ss_pred EecCCcCCCcCHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccc
Confidence 999 5555566666777888888999999999999999999999999999999976 1
Q ss_pred -------CCCCEEEEEecccCcceeEEEEEE
Q 012522 414 -------KDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 414 -------~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
++.+++++++++.||.+.++||++
T Consensus 396 ~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 426 (427)
T 3ho9_A 396 PHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 426 (427)
T ss_dssp BSSCEECSSCCEEEEEEEETTTEEEEEEEEC
T ss_pred ccccccCCCCCEEEEeCccCCceeEEEEEEe
Confidence 145789999988889899999875
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-32 Score=279.66 Aligned_cols=272 Identities=22% Similarity=0.325 Sum_probs=212.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCe----EEEEeecCCCC-------------------------ccchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGS-------------------------TRAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~----vi~g~~~~~~~-------------------------~~~~~a~~ia~~lGl 124 (461)
..+|+.+|+++||+++|+++++||. +++|+..+++. .....+..++..+|+
T Consensus 71 ~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 150 (408)
T 1j3n_A 71 FVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGF 150 (408)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCC
Confidence 4789999999999999999999995 77776654321 011467889999999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
++|+++|+++|+|++.||..|++.|++|++|++||+|+|.+... +...
T Consensus 151 --~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~------------------------~~~~------ 198 (408)
T 1j3n_A 151 --TGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITP------------------------MAIG------ 198 (408)
T ss_dssp --CSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSH------------------------HHHH------
T ss_pred --CCceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCH------------------------HHHH------
Confidence 46999999999999999999999999999999999999986540 0000
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--C
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D 282 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~ 282 (461)
.+. . .+.+. +. ..+.+ ..++| ||. +
T Consensus 199 ---------------~~~----~--~~~ls------------------------~~-----~~~p~--~~~~p-fd~~~d 225 (408)
T 1j3n_A 199 ---------------AFA----V--MRALS------------------------TR-----NEEPE--KASRP-FTLSRD 225 (408)
T ss_dssp ---------------HHH----H--TTCBC------------------------CC-----TTCHH--HHCCT-TBTTCC
T ss_pred ---------------HHH----h--ccccc------------------------CC-----CCCCC--cCccc-CcCCCC
Confidence 000 0 00110 00 00111 24566 653 5
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeec-----cCCCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~-----~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
|++ ++|||+++||++.+.|+++|.+++++|.+++... ..|...+.+...+++++|+++|++++|||+|
T Consensus 226 g~v-------~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~v 298 (408)
T 1j3n_A 226 GFV-------MGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYI 298 (408)
T ss_dssp CBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred ceE-------EeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEE
Confidence 666 8999999999999999999999999999988765 2344455677899999999999999999999
Q ss_pred EecCCChHH-----HHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-------------------C
Q 012522 358 EINEAFASQ-----YVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-------------------G 413 (461)
Q Consensus 358 eiheafa~~-----~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-------------------~ 413 (461)
|.|++++.. .....+.+|.+..++|+++++..+||+.||+|+.++++++++|+++ +
T Consensus 299 e~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~v 378 (408)
T 1j3n_A 299 NAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFV 378 (408)
T ss_dssp ECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCC
T ss_pred EEeCCcCcccCHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccC
Confidence 999999874 3445566777777899999999999999999999999999999986 1
Q ss_pred C-----CCCEEEEEecccCcceeEEEEEE
Q 012522 414 K-----DCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 414 ~-----~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+ +.+++++++++-||.+.++||++
T Consensus 379 ~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 407 (408)
T 1j3n_A 379 PEPREAKVDYALSNSFAFGGHNAVLAFKR 407 (408)
T ss_dssp SSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred CCCcCCCCCEEEEecccCCcceEEEEEec
Confidence 1 34788888887788899999875
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-30 Score=268.69 Aligned_cols=272 Identities=20% Similarity=0.292 Sum_probs=210.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC-------------------------ccchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~-------------------------~~~~~a~~ia~~lGl 124 (461)
..+|+.+|+++||+++|+++++|| .|++|+..++.. .....+..++..+|+
T Consensus 98 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 177 (437)
T 2gqd_A 98 FTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGA 177 (437)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCC
Confidence 368999999999999999999999 999998765410 012467889999999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
+.|+++|+++|+|++.||..|++.|++|++|++||+|+|.+.. |. ..
T Consensus 178 --~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~-----------------------~~------- 224 (437)
T 2gqd_A 178 --KGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPIT-HM-----------------------AI------- 224 (437)
T ss_dssp --CSSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HH-----------------------HH-------
T ss_pred --CCceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HH-----------------------HH-------
Confidence 5699999999999999999999999999999999999998654 10 00
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--C
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D 282 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~ 282 (461)
..+. ..+. ++.++.+. ..++| ||. +
T Consensus 225 --------------~~~~------~~~~------------------------ls~~~~p~--------~~~~p-fd~~~~ 251 (437)
T 2gqd_A 225 --------------AGFS------ASRA------------------------LSTNDDIE--------TACRP-FQEGRD 251 (437)
T ss_dssp --------------HHHH------HTTC------------------------BCCCCCTT--------TSSCT-TCTTCC
T ss_pred --------------HHHH------hccC------------------------ccCCCCCc--------cccCC-CCCCCC
Confidence 0000 0111 11111110 13556 764 5
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccC-----CCCCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
|++ ++|||+|+||++.+.|+++|.+++++|.+++..... |...+.+...+++++|+++|++++|||+|
T Consensus 252 G~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~v 324 (437)
T 2gqd_A 252 GFV-------MGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYL 324 (437)
T ss_dssp SBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred Cce-------eeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEE
Confidence 666 999999999999999999999999999999887643 33334566789999999999999999999
Q ss_pred EecCCChHH----HHH-HHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C------------------
Q 012522 358 EINEAFASQ----YVY-CIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G------------------ 413 (461)
Q Consensus 358 eiheafa~~----~~~-~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~------------------ 413 (461)
|+|++++.. +.. ..+.+|....++++++.+..+||+.||+|+.++++++++|+++ +
T Consensus 325 e~HgtgT~~~D~~E~~al~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v 404 (437)
T 2gqd_A 325 NAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIV 404 (437)
T ss_dssp ECCCCSCHHHHHHHHHHHHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSBCC
T ss_pred EEECCCCcCcCHHHHHHHHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccC
Confidence 999999874 332 2344555556788888888899999999999999999999986 1
Q ss_pred C------CCCEEEEEecccCcceeEEEEEEc
Q 012522 414 K------DCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 414 ~------~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+ +.+++++++++-||.+.++||++.
T Consensus 405 ~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 435 (437)
T 2gqd_A 405 PNEAQDLDITYAMSNSLGFGGHNAVLVFKKF 435 (437)
T ss_dssp BSSCEECCCSEEEEEEECGGGEEEEEEEECC
T ss_pred CCccccCCCCEEEEccCcCCCeeEEEEEEec
Confidence 1 347888888877888899998864
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=268.78 Aligned_cols=267 Identities=21% Similarity=0.248 Sum_probs=206.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCCc-------------------------cchHHHHHHHHcCCC
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGST-------------------------RAMECRMAAFYAGFP 125 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~~-------------------------~~~~a~~ia~~lGl~ 125 (461)
.+|+.+++++||+++|+ +++| +|++|+..+++.. ....+..++..+|+
T Consensus 84 ~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl- 160 (416)
T 2wge_A 84 QRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGA- 160 (416)
T ss_dssp HHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhcc-
Confidence 47999999999999998 4555 3999987665410 01357789999999
Q ss_pred CCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHH
Q 012522 126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQR 205 (461)
Q Consensus 126 ~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 205 (461)
++|+++++++|+|++.||..|+++|++|++|++|++|+|.++.... ..++
T Consensus 161 -~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~---------------------~~~~-------- 210 (416)
T 2wge_A 161 -RAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALP---------------------IAAF-------- 210 (416)
T ss_dssp -CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHH---------------------HHHH--------
T ss_pred -CCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHH---------------------HHHH--------
Confidence 5799999999999999999999999999999999999999876100 0000
Q ss_pred hCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CC
Q 012522 206 FGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DG 283 (461)
Q Consensus 206 ~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g 283 (461)
.. .+.+.. .. .+++. .++| |+. +|
T Consensus 211 --------------------~~--~~~l~~-------~~------------~~~~~------------~~~p-fd~~~dg 236 (416)
T 2wge_A 211 --------------------SM--MRAMST-------RN------------DEPER------------ASRP-FDKDRDG 236 (416)
T ss_dssp --------------------HT--TTCBCC-------CT------------TSGGG------------SCCT-TBTTCCC
T ss_pred --------------------Hh--cchhhc-------cc------------cCCcc------------cccc-cccCCCC
Confidence 00 001100 00 00111 2345 653 55
Q ss_pred ccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeec-----cCCCCCCCcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 284 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~-----~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
++ ++|||+|+||++.+.|+++|.+++++|.+++... ..|...+.++..+++++|+++|++++|||+||
T Consensus 237 ~v-------~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve 309 (416)
T 2wge_A 237 FV-------FGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVN 309 (416)
T ss_dssp BC-------BBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred cc-------ccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 55 9999999999999999999999999999988765 34555566788999999999999999999999
Q ss_pred ecCCChHH----HHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C--------------------
Q 012522 359 INEAFASQ----YVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G-------------------- 413 (461)
Q Consensus 359 iheafa~~----~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~-------------------- 413 (461)
+|.+++.. +...++.++. .++++++++..+|||.||+|+.++++++++|+++ +
T Consensus 310 ~HgtgT~~gD~~E~~al~~~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~ 387 (416)
T 2wge_A 310 AHGTATPIGDAAEANAIRVAGC--DQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAG 387 (416)
T ss_dssp CCCCCCHHHHHHHHHHHHHTTC--TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCEECCS
T ss_pred ECCCCCcCCCHHHHHHHHHhcc--CCCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCCC
Confidence 99998874 6666666643 3678888889999999999999999999999986 1
Q ss_pred ----CCCCEEEEEecccCcceeEEEEEE
Q 012522 414 ----KDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 414 ----~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
.+.+++++++++.||.+.++||++
T Consensus 388 ~~~~~~~~~a~~~sfGfGG~na~~vl~~ 415 (416)
T 2wge_A 388 EPRYGDYRYAVNNSFGFGGHNVALAFGR 415 (416)
T ss_dssp SCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCccCCCCEEEEeCcccCceeEEEEEEe
Confidence 134788888887788888888875
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=267.57 Aligned_cols=271 Identities=21% Similarity=0.234 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHHHHcCCC---cCCcCeEEEEeecCCCCc-------------------------cchHHHHHHHHcCCCC
Q 012522 75 DDLLAPVLKAVIEKTRLN---PSEVGDIVVGTVLAPGST-------------------------RAMECRMAAFYAGFPE 126 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~---~~~Id~vi~g~~~~~~~~-------------------------~~~~a~~ia~~lGl~~ 126 (461)
.+|+.+++++||+++|++ +++| .|++|+..+++.. ....+..++..+|+
T Consensus 100 ~~l~l~aa~~ALedAG~~~~~~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl-- 176 (434)
T 2gp6_A 100 QRMSTVLSRRLWENAGSPEVDTNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHA-- 176 (434)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCTTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCC--
T ss_pred HHHHHHHHHHHHHhcCCCccCCCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcC--
Confidence 679999999999999983 3334 5888887654310 01357789999999
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHh
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRF 206 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 206 (461)
++|+++|+++|+|++.||..|+++|++|++|++|++|+|.++...
T Consensus 177 ~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~----------------------------------- 221 (434)
T 2gp6_A 177 KAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAV----------------------------------- 221 (434)
T ss_dssp CSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHH-----------------------------------
T ss_pred CCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHH-----------------------------------
Confidence 579999999999999999999999999999999999999987610
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCc
Q 012522 207 GVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGT 284 (461)
Q Consensus 207 g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~ 284 (461)
.++..++.+ + .+. ....+ +++ .++| |+. +|+
T Consensus 222 --------~~~~~~~~~------~-~ls-------~~~~~------------p~~------------~~~p-fd~~~~g~ 254 (434)
T 2gp6_A 222 --------PIAGFAQMR------I-VMS-------TNNDD------------PAG------------ACRP-FDRDRDGF 254 (434)
T ss_dssp --------HHHHHHTTT------S-SCC-------CCTTC------------TTT------------SCCS-SBTTCCCC
T ss_pred --------HHHHHHHHH------H-Hhc-------CCCCC------------CCC------------ceec-ccccCCCc
Confidence 000000000 0 000 00000 111 3455 553 555
Q ss_pred cccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeec-----cCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEe
Q 012522 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI 359 (461)
Q Consensus 285 lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~-----~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~ei 359 (461)
+ ++|||+|+||++.+.|+++|.+++++|.+++... ..|...+.+...+++++|+++|++++|||+||+
T Consensus 255 v-------~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~ 327 (434)
T 2gp6_A 255 V-------FGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNA 327 (434)
T ss_dssp C-------BBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEEC
T ss_pred c-------eecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEE
Confidence 5 9999999999999999999999999999988765 234445567789999999999999999999999
Q ss_pred cCCChHH-HHHHHHHcC--CCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC---------------------
Q 012522 360 NEAFASQ-YVYCIKKLG--LDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK--------------------- 414 (461)
Q Consensus 360 heafa~~-~~~~~e~LG--l~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~--------------------- 414 (461)
|...+.. .....+.|+ +...++|++|++.++|||.||+|+.++++++++|+++ +|
T Consensus 328 Hgtgt~~~D~~E~~al~~~fg~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~ 407 (434)
T 2gp6_A 328 HATGTQVGDLAEGRAINNALGGNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVAGEP 407 (434)
T ss_dssp CCCSCHHHHHHHHHHHHHHHTTCCCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCEECCSSC
T ss_pred eCCcCccchHHHHHHHHHHhccCCCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccCCCc
Confidence 9544322 122222222 1233899999999999999999999999999999987 11
Q ss_pred ---CCCEEEEEecccCcceeEEEEEE
Q 012522 415 ---DCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 415 ---~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.+++++++++.||.+.++||++
T Consensus 408 ~~~~~~~a~~~sfGfGG~na~~vl~~ 433 (434)
T 2gp6_A 408 RPGNYRYAINNSFGFGGHNVAIAFGR 433 (434)
T ss_dssp CCSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred cCCCCCEEEEeCCcCCCeeEEEEEEe
Confidence 34788998888888889999875
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-30 Score=265.95 Aligned_cols=271 Identities=21% Similarity=0.264 Sum_probs=209.0
Q ss_pred HHHHHHHHHHHHHHHcCCCc-CCcC----eEEEEeecCCCC-------------------------ccchHHHHHHHHcC
Q 012522 74 ADDLLAPVLKAVIEKTRLNP-SEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAG 123 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~-~~Id----~vi~g~~~~~~~-------------------------~~~~~a~~ia~~lG 123 (461)
..+|+.+|+++||+++|+++ ++|| .|++|+..++.. .....+..++..+|
T Consensus 97 ~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (438)
T 2iwz_A 97 PTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYK 176 (438)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhC
Confidence 46799999999999999998 8888 699998765420 01247888999999
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
+ +.|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |. ..
T Consensus 177 l--~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~-----------------------~~------ 224 (438)
T 2iwz_A 177 L--KGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCIS-PL-----------------------SL------ 224 (438)
T ss_dssp C--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HH-----------------------HH------
T ss_pred C--CCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcC-HH-----------------------HH------
Confidence 9 5699999999999999999999999999999999999998543 10 00
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-- 281 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-- 281 (461)
..+. ..+.+... .+| + ..++| |+.
T Consensus 225 ---------------~~~~------~~~~ls~~--------~~p------------~------------~~~~p-fd~~~ 250 (438)
T 2iwz_A 225 ---------------AGFS------RARALSTN--------SDP------------K------------LACRP-FHPKR 250 (438)
T ss_dssp ---------------HHHH------HTTCBCCC--------SCT------------T------------TSCCT-TCTTC
T ss_pred ---------------HHHH------hcCCcCCC--------CCC------------C------------ccccc-CCCCC
Confidence 0000 01111100 000 1 13456 665
Q ss_pred CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccC-----CCCCCCcHHHHHHHHHHHcCCCCCCccE
Q 012522 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINL 356 (461)
Q Consensus 282 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~ai~~aL~~AGl~~~DID~ 356 (461)
+|++ ++|||+++||++.+.|+++|.+++++|.+++..... |...+.+...+++++|+++|++++|||+
T Consensus 251 ~G~~-------~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ 323 (438)
T 2iwz_A 251 DGFV-------MGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISY 323 (438)
T ss_dssp CSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred CCEE-------eeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCE
Confidence 6666 999999999999999999999999999999886543 4445567789999999999999999999
Q ss_pred EEecCCChHH----HHHHH-HHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC----------------
Q 012522 357 FEINEAFASQ----YVYCI-KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK---------------- 414 (461)
Q Consensus 357 ~eiheafa~~----~~~~~-e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~---------------- 414 (461)
||+|++++.. +...+ +.+|....++++++.+..+|||.||+|+.++++++++|+++ +|
T Consensus 324 ve~HgtgT~~gD~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~ 403 (438)
T 2iwz_A 324 INAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNY 403 (438)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSBC
T ss_pred EEecCCCCcccCHHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccc
Confidence 9999999863 33322 34454445677888888899999999999999999999986 11
Q ss_pred -----------CCCEEEEEecccCcceeEEEEEE
Q 012522 415 -----------DCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 415 -----------~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.+++++++++.||.+.++||++
T Consensus 404 v~~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 437 (438)
T 2iwz_A 404 VPLKAQEWKTEKRFIGLTNSFGFGGTNATLCIAG 437 (438)
T ss_dssp CBSSCEECCCSSSCEEEEEEEETTTEEEEEEEEC
T ss_pred cCCCcccCCCCCccEEEEecCcCCCeeEEEEEee
Confidence 15788988887788889999875
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-30 Score=265.18 Aligned_cols=270 Identities=17% Similarity=0.184 Sum_probs=207.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC-------------------------ccchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~-------------------------~~~~~a~~ia~~lGl 124 (461)
..+|+.+|+++||+++|+++++|| +|++|+..+++. ....++..++..+|+
T Consensus 92 ~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 171 (428)
T 3mqd_A 92 GTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKI 171 (428)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCC
Confidence 467999999999999999999999 688887654311 012467889999999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 204 (461)
++|+++|+++|+|+++||..|+++|++|++|++|++|+|.++..+.. +
T Consensus 172 --~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~----------------------~-------- 219 (428)
T 3mqd_A 172 --KGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSV----------------------L-------- 219 (428)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH----------------------H--------
T ss_pred --CCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHH----------------------H--------
Confidence 57999999999999999999999999999999999999998862110 0
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--C
Q 012522 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D 282 (461)
Q Consensus 205 ~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~ 282 (461)
+. ..+.+. .+. ..+.-..++| |+. +
T Consensus 220 ----------------~~------~~~~ls------------------------~~~------~~~p~~~~rp-fd~~~~ 246 (428)
T 3mqd_A 220 ----------------FD------AMGAMS------------------------SKY------NDTPSTASRA-YDKNRD 246 (428)
T ss_dssp ----------------HH------HTTCBC------------------------CTT------TTSGGGSCCT-TBTTCC
T ss_pred ----------------HH------Hhhhhc------------------------ccc------cCCcccccCc-ccCCCC
Confidence 00 000000 000 0000113456 654 6
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC---CCCCcHHHHHHHHHHHcCCCCCCccEEEe
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS---VMGIGPAVAIPAAVKSAGLQIDDINLFEI 359 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~---~~~~~~~~ai~~aL~~AGl~~~DID~~ei 359 (461)
|++ ++|||+++||++.+.|+++|.+|+++|.+++....... ..+.++..+++++|+ |++ +||||||.
T Consensus 247 G~v-------~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al~--gl~-~dId~ve~ 316 (428)
T 3mqd_A 247 GFV-------IAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALS--TVT-SKIDYINP 316 (428)
T ss_dssp SBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHHT--TCC-SCCCEEEC
T ss_pred Ccc-------cccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHh--CCc-cccCEEEE
Confidence 777 89999999999999999999999999999998763322 245678899999999 999 99999999
Q ss_pred cCCChH----HHHH-HHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C--------------------
Q 012522 360 NEAFAS----QYVY-CIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G-------------------- 413 (461)
Q Consensus 360 heafa~----~~~~-~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~-------------------- 413 (461)
|...+. .+.. ..+.++....++++++.+..+|||.||+|+++++.++++|+++ +
T Consensus 317 HgtgT~~~D~~E~~al~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~~~~ 396 (428)
T 3mqd_A 317 HATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIVR 396 (428)
T ss_dssp CCCSCHHHHHHHHHHHHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSCBCS
T ss_pred eCCCCCCcCHHHHHHHHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccccCCccC
Confidence 988775 2222 2344564445578888899999999999999999999999976 1
Q ss_pred -----CCCCEEEEEecccCcceeEEEEEEc
Q 012522 414 -----KDCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 414 -----~~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
.+.+++++++++-||.+.++||++.
T Consensus 397 ~~~~~~~~~~~~~~sfGfGG~Na~~vl~~~ 426 (428)
T 3mqd_A 397 KRIDNVQLNTVLSNSFGFGGTNATLVFQRY 426 (428)
T ss_dssp SCEESCCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CccccCCCCEEEEecCcCCcceEEEEEeec
Confidence 1346788888888888999999864
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-29 Score=259.67 Aligned_cols=266 Identities=19% Similarity=0.221 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC-------------------------ccchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~-------------------------~~~~~a~~ia~~lGl 124 (461)
..+|+.+++++||+++|+++++|| .|++|+..++.. .....+..++..+|+
T Consensus 79 ~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 158 (415)
T 1tqy_B 79 STRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGM 158 (415)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCC
Confidence 478999999999999999999999 899998754321 024578899999999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccc-cccccccccCCChhhhhhhcccccCccHHHHHHHHH
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM-TVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
++|+++|+++|+|++.||..|+++|++| +|++||+|+|.+ +...+ .+
T Consensus 159 --~gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~----------------------~~------- 206 (415)
T 1tqy_B 159 --RGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGW----------------------VS------- 206 (415)
T ss_dssp --CSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHH----------------------HH-------
T ss_pred --CCceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHH----------------------HH-------
Confidence 5799999999999999999999999999 999999999994 43110 00
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeee----ccCCCCCCCCHHHHhccCCCC
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTIS----VDDGIRPNTTIADLAKLKPAF 279 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~----~de~~r~~~t~e~l~~~~pvf 279 (461)
+. ..+ .++ +++ .++| |
T Consensus 207 -----------------~~------~~~------------------------~ls~~~~~~~------------~~~p-f 226 (415)
T 1tqy_B 207 -----------------QI------ASG------------------------RISTATDPDR------------AYLP-F 226 (415)
T ss_dssp -----------------HH------TTS------------------------CBCCCSCGGG------------SCCT-T
T ss_pred -----------------HH------hcc------------------------CccCCCCCCC------------CcCC-C
Confidence 00 000 011 122 3345 6
Q ss_pred CC--CCccccCCCCcccccceEEEEcchhHHHhcCC-CeeEEEEEeeeeccCCCCCCC--cHHHHHHHHHHHcCCCCCCc
Q 012522 280 KK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGL-PILGVFRSFSAVGVDPSVMGI--GPAVAIPAAVKSAGLQIDDI 354 (461)
Q Consensus 280 ~~--~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~-~~~a~i~g~~~~~~~p~~~~~--~~~~ai~~aL~~AGl~~~DI 354 (461)
+. +|++ ++|||+++||++.+.|+++|. +++++|.+++........... +...+++++|+++|++++||
T Consensus 227 d~~~~G~~-------~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~~~~~ai~~al~~Agl~~~dI 299 (415)
T 1tqy_B 227 DERAAGYV-------PGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDV 299 (415)
T ss_dssp STTCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGC
T ss_pred CCCCCCcc-------eeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCHHHHHHHHHHHHHcCCCHhHC
Confidence 54 4555 999999999999999999999 999999999887542221111 78899999999999999999
Q ss_pred cEEEecCCChH----HHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc------------------
Q 012522 355 NLFEINEAFAS----QYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR------------------ 412 (461)
Q Consensus 355 D~~eiheafa~----~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~------------------ 412 (461)
|++|.|..++. .+...++.+ +...++.++..+..+|||.||+|+.+++.++++|+++
T Consensus 300 d~ve~Hgtgt~~~D~~E~~al~~~-~g~~~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~ 378 (415)
T 1tqy_B 300 DVVFADGAGVPELDAAEARAIGRV-FGREGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGID 378 (415)
T ss_dssp CEEECCCCCSHHHHHHHHHHHHHH-HCTTCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCE
T ss_pred CEEEEeCCCCcCcCHHHHHHHHHH-hCCCCceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc
Confidence 99999999884 455555444 2222344445556689999999999999999999985
Q ss_pred -CC------CCCEEEEEecccCcceeEEEEEEcc
Q 012522 413 -GK------DCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 413 -~~------~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
++ +.+++++++++.||.+.++||++.+
T Consensus 379 ~v~~~~~~~~~~~a~~~sfGfgG~n~~~vl~~~~ 412 (415)
T 1tqy_B 379 LVLGEPRSTAPRTALVLARGRWGFNSAAVLRRFA 412 (415)
T ss_dssp ECBSSCBCCCCSEEEEEEEETTTEEEEEEEEEC-
T ss_pred ccCCCCccCCCCEEEEecCcCCCeEEEEEEecCC
Confidence 11 4578999988888889999998753
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-30 Score=267.04 Aligned_cols=274 Identities=16% Similarity=0.221 Sum_probs=207.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCc-C----eEEEEeecCCC-------------------------CccchHHHHHHHHcC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEV-G----DIVVGTVLAPG-------------------------STRAMECRMAAFYAG 123 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~I-d----~vi~g~~~~~~-------------------------~~~~~~a~~ia~~lG 123 (461)
..+|+.+|+++||+++|+++++| | .|++|+..+.. ...+..+..++..+|
T Consensus 102 ~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 181 (451)
T 4ddo_A 102 FIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHR 181 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHhc
Confidence 46799999999999999999999 7 68888764321 001335778999999
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++.... +.
T Consensus 182 l--~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~----------------------~~------- 230 (451)
T 4ddo_A 182 F--RGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVS----------------------LG------- 230 (451)
T ss_dssp C--CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHH----------------------HH-------
T ss_pred C--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHH----------------------HH-------
Confidence 9 5799999999999999999999999999999999999999875100 00
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-- 281 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-- 281 (461)
.+. + .+.+.. ..+.+....++| |+.
T Consensus 231 ----------------~~~-~-----~~~ls~------------------------------~~~~~~~~~~~p-fd~~~ 257 (451)
T 4ddo_A 231 ----------------GFA-A-----ARALST------------------------------GFSEEPVRASRP-FDRDR 257 (451)
T ss_dssp ----------------HHH-H-----TTCBCC------------------------------SCTTSGGGSCCT-TBTTC
T ss_pred ----------------HHH-H-----Hhhhcc------------------------------CCCcCccccccc-cccCC
Confidence 000 0 000000 011112234556 543
Q ss_pred CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccC-----CCCCCCcHHHHHHHHHHHcCCCCCCccE
Q 012522 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINL 356 (461)
Q Consensus 282 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~ai~~aL~~AGl~~~DID~ 356 (461)
+|++ ++|||+|+||++.+.|++++.+|+++|.+++..... +...+.+...+++++|+++|++++|||+
T Consensus 258 ~g~v-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~ 330 (451)
T 4ddo_A 258 DGFV-------MGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDY 330 (451)
T ss_dssp CSBC-------BBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred CCcE-------EeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCE
Confidence 5666 899999999999999999999999999999887622 1112235678999999999999999999
Q ss_pred EEecCCChHH----HHHHH-HHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C-----------------
Q 012522 357 FEINEAFASQ----YVYCI-KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G----------------- 413 (461)
Q Consensus 357 ~eiheafa~~----~~~~~-e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~----------------- 413 (461)
||+|.+++.. +...+ +.++. ..++++++.+..+|||.||+|+.++++++++|+++ +
T Consensus 331 ve~Hgtgt~~~d~~E~~al~~~~~~-~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~ 409 (451)
T 4ddo_A 331 VNAHATSTPVGDAGEIEALKTVFGV-GAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLD 409 (451)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHCS-SSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSE
T ss_pred EEecCCcCcccCHHHHHHHHHHhCC-CCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCccccccc
Confidence 9999999862 23333 33444 34677788888899999999999999999999976 1
Q ss_pred --------CCCCEEEEEecccCcceeEEEEEEcc
Q 012522 414 --------KDCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 414 --------~~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
.+.+++++++++.||.+.++||++..
T Consensus 410 ~~~~~~~~~~~~~a~~~sfgfgG~na~~vl~~~~ 443 (451)
T 4ddo_A 410 LIGPAARHVPVEIALSNGFGFGGVNASVLFRRYP 443 (451)
T ss_dssp ECCSSCEECCCSEEEEEEEETTTEEEEEEEEESC
T ss_pred ccCCCCCCCCcCEEEEeeEcCCCceEEEEEeeCC
Confidence 03467889888888999999999764
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-30 Score=263.45 Aligned_cols=274 Identities=19% Similarity=0.256 Sum_probs=208.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC-------------c-------------cchH-HH----HH
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------T-------------RAME-CR----MA 118 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~-------------~-------------~~~~-a~----~i 118 (461)
..+|+.+++++||+++|+++++|| .|++|+..+++. . .++. +. .+
T Consensus 73 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i 152 (424)
T 1tqy_A 73 ASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEV 152 (424)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHH
Confidence 367999999999999999999999 699998765420 0 0111 33 88
Q ss_pred HHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHH
Q 012522 119 AFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGIT 198 (461)
Q Consensus 119 a~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 198 (461)
+..+|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |. ..
T Consensus 153 a~~lgl--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~-----------------------~~- 205 (424)
T 1tqy_A 153 AWAVGA--EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT-PI-----------------------VV- 205 (424)
T ss_dssp HHHHTC--CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HH-----------------------HH-
T ss_pred HHhcCC--CCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCC-HH-----------------------HH-
Confidence 899999 5799999999999999999999999999999999999999654 10 00
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCC
Q 012522 199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278 (461)
Q Consensus 199 a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pv 278 (461)
..+. ..+.+.. +. .++|+ .+||
T Consensus 206 --------------------~~~~------~~~~ls~-------~~------------~~p~~------------~~rp- 227 (424)
T 1tqy_A 206 --------------------ACFD------AIRATTA-------RN------------DDPEH------------ASRP- 227 (424)
T ss_dssp --------------------HHHH------HTTCBCC-------CC------------SCGGG------------CCCT-
T ss_pred --------------------HHHH------hhccccC-------CC------------CCCCC------------CccC-
Confidence 0000 0111110 00 01122 3455
Q ss_pred CCC--CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccC-----CCCCCCcHHHHHHHHHHHcCCCC
Q 012522 279 FKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQI 351 (461)
Q Consensus 279 f~~--~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~ai~~aL~~AGl~~ 351 (461)
|+. +|++ ++|||+++||++.+.|+++|.+++++|.|++..... |...+.+...+++++|+++|+++
T Consensus 228 fd~~~~G~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~ 300 (424)
T 1tqy_A 228 FDGTRDGFV-------LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDA 300 (424)
T ss_dssp TBTTCCCBC-------EECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred CCCCCCcee-------eecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCH
Confidence 664 5666 999999999999999999999999999998876532 33444567899999999999999
Q ss_pred CCccEEEecCCChHH----HHHHH-HHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC-----------
Q 012522 352 DDINLFEINEAFASQ----YVYCI-KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK----------- 414 (461)
Q Consensus 352 ~DID~~eiheafa~~----~~~~~-e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~----------- 414 (461)
+|||++|.|++++.. +...+ +.++....++++++.+..+||+.+|+|+.++++++++|+++ +|
T Consensus 301 ~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~ 380 (424)
T 1tqy_A 301 TDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPE 380 (424)
T ss_dssp GGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTT
T ss_pred HHCCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCC
Confidence 999999999998863 33333 34444444677777777899999999999999999999987 21
Q ss_pred -------------CCCEEEEEecccCcceeEEEEEEcc
Q 012522 415 -------------DCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 415 -------------~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
+.+++++++++.||.+.++||++.+
T Consensus 381 ~~~~~v~~~~~~~~~~~a~~~sfG~GG~n~~~vl~~~~ 418 (424)
T 1tqy_A 381 CDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRDAE 418 (424)
T ss_dssp BCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECHH
T ss_pred CCcccCCCcccCCCCCEEEEccccCCceEEEEEEccCC
Confidence 4578999988888888999998753
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-29 Score=261.33 Aligned_cols=268 Identities=20% Similarity=0.263 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC-------------------------ccchHHHHHHHHcCCC
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGFP 125 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~-------------------------~~~~~a~~ia~~lGl~ 125 (461)
.+|+.+|+++||+++|+++++|| +|++|+..++.. .....+..++..+|+
T Consensus 94 ~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl- 172 (430)
T 1ox0_A 94 SLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGA- 172 (430)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcC-
Confidence 47999999999999999999999 588887755410 001367789999999
Q ss_pred CCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHH
Q 012522 126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQR 205 (461)
Q Consensus 126 ~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 205 (461)
++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |. ..
T Consensus 173 -~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~-----------------------~~-------- 219 (430)
T 1ox0_A 173 -NGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASIT-PF-----------------------AI-------- 219 (430)
T ss_dssp -CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HH-----------------------HH--------
T ss_pred -CCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HH-----------------------HH--------
Confidence 5799999999999999999999999999999999999998754 00 00
Q ss_pred hCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CC
Q 012522 206 FGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DG 283 (461)
Q Consensus 206 ~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g 283 (461)
..+. ..+. ++.++.++. .++| ||. +|
T Consensus 220 -------------~~~~------~~~~------------------------ls~~~~p~~--------~~~p-Fd~~~~g 247 (430)
T 1ox0_A 220 -------------AGFQ------ALTA------------------------LSTTEDPTR--------ASIP-FDKDRNG 247 (430)
T ss_dssp -------------HHHH------HTTC------------------------BCCCSSTTS--------SSCT-TBTTCCS
T ss_pred -------------HHHH------hCCC------------------------ccCCCCCCC--------CCCC-CCCCCCC
Confidence 0000 0011 111111111 3455 654 45
Q ss_pred ccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 284 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
++ ++|||+++||++.+.|+++|.+++++|.+++.... .|...+.+...+++++|+++|++++|||+||
T Consensus 248 ~~-------~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve 320 (430)
T 1ox0_A 248 FV-------MGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVN 320 (430)
T ss_dssp BC-------BCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEE
T ss_pred cc-------ccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEE
Confidence 55 99999999999999999999999999999876542 3444456778999999999999999999999
Q ss_pred ecCCChHHHH-----HHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-------------------CC
Q 012522 359 INEAFASQYV-----YCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-------------------GK 414 (461)
Q Consensus 359 iheafa~~~~-----~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-------------------~~ 414 (461)
.|++++...- ...+.+|- ..+||..++. +|||.||+|+.++++++++|+++ ++
T Consensus 321 ~Hgtgt~~~D~~E~~al~~~~g~-~~~v~s~k~~--~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~ 397 (430)
T 1ox0_A 321 AHGTSTPANEKGESGAIVAVLGK-EVPVSSTKSF--TGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVY 397 (430)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHCS-SSEEECTHHH--HCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECB
T ss_pred EeCCcCcccCHHHHHHHHHHhCC-Cceecccccc--cccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCC
Confidence 9999987531 12233343 3467777665 79999999999999999999987 11
Q ss_pred ------CCCEEEEEecccCcceeEEEEEEc
Q 012522 415 ------DCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 415 ------~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+.+++++++++.||.+.++||++.
T Consensus 398 ~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 427 (430)
T 1ox0_A 398 GQGLEKEIPYAISNTFGFGGHNAVLAFKRW 427 (430)
T ss_dssp SSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CCCcCCCCCEEEEeCccCCCceEEEEEeec
Confidence 357889988877888899999864
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=99.97 E-value=8.7e-30 Score=263.71 Aligned_cols=273 Identities=19% Similarity=0.257 Sum_probs=206.3
Q ss_pred HHHHHHHHHHHHHHHcCC-CcCCcC----eEEEEeecCCCC-----------c--------------cchHHHHHHHHcC
Q 012522 74 ADDLLAPVLKAVIEKTRL-NPSEVG----DIVVGTVLAPGS-----------T--------------RAMECRMAAFYAG 123 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl-~~~~Id----~vi~g~~~~~~~-----------~--------------~~~~a~~ia~~lG 123 (461)
..+|+.+|+++||+++|+ ++++|| .|++|+..+... . ....+..++..+|
T Consensus 88 ~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 167 (431)
T 2ix4_A 88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG 167 (431)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHHC
Confidence 468999999999999999 999898 699998755310 0 1246788999999
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++.... ..+
T Consensus 168 l--~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~---------------------~~~------- 217 (431)
T 2ix4_A 168 F--QGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALS---------------------VAG------- 217 (431)
T ss_dssp C--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHH---------------------HHH-------
T ss_pred C--CCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH---------------------HHH-------
Confidence 9 5799999999999999999999999999999999999999876110 000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-- 281 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-- 281 (461)
+. ..+.+... . -.++++ .++| |+.
T Consensus 218 -----------------~~------~~~~ls~~------------~------~~~~~~------------~~~p-fd~~~ 243 (431)
T 2ix4_A 218 -----------------FS------RSRALSTK------------F------NSSPQE------------ASRP-FDCDR 243 (431)
T ss_dssp -----------------HH------HTTCBCCT------------T------TTCGGG------------SCCT-TBTTC
T ss_pred -----------------HH------hccccCcc------------c------cCCccc------------cccc-CCCCC
Confidence 00 00111000 0 001111 2345 543
Q ss_pred CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeec-----cCCCCCCCcHHHHHHHHHHHcCCCCCCccE
Q 012522 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-----VDPSVMGIGPAVAIPAAVKSAGLQIDDINL 356 (461)
Q Consensus 282 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~-----~~p~~~~~~~~~ai~~aL~~AGl~~~DID~ 356 (461)
+|++ ++|||+|+||++.+.|+++|.+++++|.+++... ..|...+.+...+++++|+++|++++|||+
T Consensus 244 ~g~~-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ 316 (431)
T 2ix4_A 244 DGFV-------IGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDY 316 (431)
T ss_dssp CSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred CCce-------eecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCE
Confidence 5555 9999999999999999999999999999998765 334445567789999999999999999999
Q ss_pred EEecCCChHH----HHHHHHH-cCCC--CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-----------------
Q 012522 357 FEINEAFASQ----YVYCIKK-LGLD--PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR----------------- 412 (461)
Q Consensus 357 ~eiheafa~~----~~~~~e~-LGl~--~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~----------------- 412 (461)
||.|..++.. +...+.. ++.. ..++++++++.++|||.||+|+.++++++++|+++
T Consensus 317 ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~ 396 (431)
T 2ix4_A 317 VNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDK 396 (431)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCS
T ss_pred EEEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCc
Confidence 9999877642 2222222 2211 24678888889999999999999999999999986
Q ss_pred --CC-------CCCEEEEEecccCcceeEEEEEE
Q 012522 413 --GK-------DCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 413 --~~-------~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
++ +.+++++++++.||.+.++||++
T Consensus 397 ~~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~~ 430 (431)
T 2ix4_A 397 RFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 430 (431)
T ss_dssp SSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred ccCCccccccCCCCEEEEecccCCCeeEEEEEee
Confidence 11 45788998887788888998875
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-29 Score=257.98 Aligned_cols=269 Identities=17% Similarity=0.214 Sum_probs=204.1
Q ss_pred HHHHHHHHHHHHHHHcCC-CcCCcC----eEEEEeecCCCC-------------------------ccchHHHHHHHHcC
Q 012522 74 ADDLLAPVLKAVIEKTRL-NPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAG 123 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl-~~~~Id----~vi~g~~~~~~~-------------------------~~~~~a~~ia~~lG 123 (461)
..+|+.+|+++||+++|+ ++++|| .+++|+..+... .....+..++..+|
T Consensus 77 ~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (412)
T 4ewg_A 77 VSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWD 156 (412)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhC
Confidence 467999999999999999 788899 888887653200 01346788999999
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
+ ++|+++|+++|+|+++||..|+++|++|++|++||+|+|.++..+..
T Consensus 157 l--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~------------------------------ 204 (412)
T 4ewg_A 157 L--KGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVA------------------------------ 204 (412)
T ss_dssp C--CSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH------------------------------
T ss_pred C--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHH------------------------------
Confidence 9 57999999999999999999999999999999999999997762110
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-- 281 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-- 281 (461)
.+ .. .+.+. .. ..+++. .++| ||.
T Consensus 205 ----------------~~----~~--~~~l~-------~~------------~~~p~~------------~~rp-fd~~~ 230 (412)
T 4ewg_A 205 ----------------VF----DT--LYATS-------TR------------NDEPHL------------TPRP-FDAKR 230 (412)
T ss_dssp ----------------HH----HT--TTCBC-------CC------------TTCGGG------------CCCT-TBTTC
T ss_pred ----------------HH----HH--hhccc-------cC------------CCCCCC------------CCCC-CCCCC
Confidence 00 00 00000 00 001111 3455 654
Q ss_pred CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC---CCCCcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS---VMGIGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 282 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~---~~~~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
+|++ ++|||+++||++.+.|+++|.+++++|.+++....... ..+.+...+++++|+++|++++|||+||
T Consensus 231 ~G~~-------~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve 303 (412)
T 4ewg_A 231 DGLV-------VGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLALEDAKLDANAIAYVN 303 (412)
T ss_dssp CCBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CCCc-------eECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 5666 89999999999999999999999999999988764221 1244677999999999999999999999
Q ss_pred ecCCChH----HHHHHHHHc-CCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc--------------------C
Q 012522 359 INEAFAS----QYVYCIKKL-GLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR--------------------G 413 (461)
Q Consensus 359 iheafa~----~~~~~~e~L-Gl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~--------------------~ 413 (461)
.|...+. .+...++.+ + .+++++..+..+|||.||+|+.+++.++++|+++ +
T Consensus 304 ~Hgtgt~~~D~~E~~al~~~~~---~~~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~~v 380 (412)
T 4ewg_A 304 AHGTSTDRGDVAESQATARTFG---ERMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDYI 380 (412)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHC---TTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCEEC
T ss_pred ccCCCCccccHHHHHHHHHHcC---CCCeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCcccccccc
Confidence 9998886 333333332 2 2355555677789999999999999999999976 1
Q ss_pred C------CCCEEEEEecccCcceeEEEEEEc
Q 012522 414 K------DCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 414 ~------~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+ +.+++++++++.||.+.++||++.
T Consensus 381 ~~~~~~~~~~~~~~~sfgfGG~na~~vl~~~ 411 (412)
T 4ewg_A 381 RGEARAIDAEYVMSNNFAFGGINTSLIFRRV 411 (412)
T ss_dssp CSSCEECCCSEEEEEEEEGGGEEEEEEEECC
T ss_pred cCcccCCCCCEEEEeeecCCcceEEEEEeeC
Confidence 1 346788888888888999999864
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-28 Score=249.49 Aligned_cols=268 Identities=16% Similarity=0.183 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCe-----EEEEeecCCC------------Cc--------------cchHHHHHHHHc
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGD-----IVVGTVLAPG------------ST--------------RAMECRMAAFYA 122 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~-----vi~g~~~~~~------------~~--------------~~~~a~~ia~~l 122 (461)
..+|+.+++++||+++|+++++||. |++|+..++. .. ....+..++..+
T Consensus 71 ~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 150 (406)
T 2vba_A 71 ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF 150 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhc
Confidence 4689999999999999999998986 9999876542 00 124678899999
Q ss_pred CCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHH
Q 012522 123 GFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENV 202 (461)
Q Consensus 123 Gl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 202 (461)
|+ ++|+++|+++|+|++.||..|++.|++|++|++||+|+|.++.. +..
T Consensus 151 gl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~------------------------~~~----- 199 (406)
T 2vba_A 151 KI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWE------------------------MAC----- 199 (406)
T ss_dssp TC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHH------------------------HHH-----
T ss_pred cC--CCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccCh------------------------HHH-----
Confidence 99 57999999999999999999999999999999999999998761 000
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-
Q 012522 203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK- 281 (461)
Q Consensus 203 ~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~- 281 (461)
. +. ..+.+..+ ++.+ ++ ..++| ||.
T Consensus 200 ----------------~-~~------~~~~ls~~------~~~~------------p~------------~~~~p-fd~~ 225 (406)
T 2vba_A 200 ----------------E-FD------AMGALSTK------YNDT------------PE------------KASRT-YDAH 225 (406)
T ss_dssp ----------------H-HH------HTTCBCCS------CTTS------------GG------------GSCCT-TBTT
T ss_pred ----------------H-Hh------hccccccc------cCCC------------Cc------------cccCc-CcCC
Confidence 0 00 01111000 0000 11 13455 664
Q ss_pred -CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC---CCCCcHHHHHHHHHHHcCCCCCCccEE
Q 012522 282 -DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS---VMGIGPAVAIPAAVKSAGLQIDDINLF 357 (461)
Q Consensus 282 -~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~---~~~~~~~~ai~~aL~~AGl~~~DID~~ 357 (461)
+|++ ++|||+++||++.+.|+++|.+++++|.|++....... ..+.+...+++++|+++| +||||+
T Consensus 226 ~~G~v-------~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~~~~~~~ai~~al~~ag---~dId~v 295 (406)
T 2vba_A 226 RDGFV-------IAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVD---TPIDYL 295 (406)
T ss_dssp CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTCC---SCCCEE
T ss_pred CCceE-------eeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhCC---CCccEE
Confidence 6666 89999999999999999999999999999988654211 114567899999999999 999999
Q ss_pred EecCCChHH----HHHH-HHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccC--------------C----
Q 012522 358 EINEAFASQ----YVYC-IKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRG--------------K---- 414 (461)
Q Consensus 358 eiheafa~~----~~~~-~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~--------------~---- 414 (461)
|.|++++.. +... .+.+|... +++++.+..+|||.||+|+.++++++++|+++. +
T Consensus 296 e~HgtgT~~gD~~E~~al~~~fg~~~--~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~ 373 (406)
T 2vba_A 296 NSHGTSTPVGDVKELAAIREVFGDKS--PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNI 373 (406)
T ss_dssp ECCCCSCHHHHHHHHHHHHHHHTTCC--CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEE
T ss_pred EeeCccCcccCHHHHHHHHHHhCcCC--CceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCcccccc
Confidence 999999863 2222 23344332 444555566899999999999999999999871 1
Q ss_pred -------CCCEEEEEecccCcceeEEEEEEc
Q 012522 415 -------DCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 415 -------~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+.+++++++.+.||.+.++||++.
T Consensus 374 v~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 404 (406)
T 2vba_A 374 VTETTDRELTTVMSNSFGFGGTNATLVMRKL 404 (406)
T ss_dssp CCSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCcccCCCCCEEEEcCCCCCCeEEEEEEEeC
Confidence 346788888877888889998864
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-28 Score=240.16 Aligned_cols=256 Identities=20% Similarity=0.163 Sum_probs=192.0
Q ss_pred eccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCC
Q 012522 58 RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQC 137 (461)
Q Consensus 58 ~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~C 137 (461)
+|++.+ +....++.++.+|+.+|+++||+++|+++++||.|++++.++++. .+..+..++..+|++ .+|+++++++|
T Consensus 36 ~~gi~~-r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~aC 112 (313)
T 1zow_A 36 MTGIKE-RHWADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMP-FPTVANMLQERLGTG-KVASMDQLAAC 112 (313)
T ss_dssp HHCCSE-EECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHHTCC-SCCEEEEECGG
T ss_pred hhCceE-EEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCcEEEECCcC
Confidence 566665 345567889999999999999999999999999999999887765 567889999999995 38999999999
Q ss_pred chHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHH
Q 012522 138 SSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAA 217 (461)
Q Consensus 138 aSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a 217 (461)
+|++.||..|+++|++|.+|++|++|+|.++...
T Consensus 113 as~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~---------------------------------------------- 146 (313)
T 1zow_A 113 SGFMYSMITAKQYVQSGDYHNILVVGADKLSKIT---------------------------------------------- 146 (313)
T ss_dssp GHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGTC----------------------------------------------
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEEccccccc----------------------------------------------
Confidence 9999999999999999999999999999987610
Q ss_pred HHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-CCccccCCCCccccc
Q 012522 218 VESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDG 296 (461)
Q Consensus 218 ~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~g~lt~~~~~~~~DG 296 (461)
+| +++ ++++ ++||
T Consensus 147 ----------------------------------------------------------~~-~d~~~~~~-------~gdG 160 (313)
T 1zow_A 147 ----------------------------------------------------------DL-TDRSTAVL-------FGDG 160 (313)
T ss_dssp ----------------------------------------------------------CT-TCHHHHTT-------BCEE
T ss_pred ----------------------------------------------------------Cc-ccccceee-------eccc
Confidence 00 110 1223 8999
Q ss_pred ceEEEEcchhHHHhcCCCeeEE-EEEeeeecc---CCC-----CC-C--------CcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 297 AGAVLLMKRSLAVQKGLPILGV-FRSFSAVGV---DPS-----VM-G--------IGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 297 AaAvvL~s~~~A~~~g~~~~a~-i~g~~~~~~---~p~-----~~-~--------~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
|+|+||++.+.. ..+++. +.+.+.... .|. .+ + .....+++++|+++|++++|||+|+
T Consensus 161 a~A~vl~~~~~~----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~ 236 (313)
T 1zow_A 161 AGAVIIGEVSEG----RGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFI 236 (313)
T ss_dssp EEEEEEEECSTT----CEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEE
T ss_pred eEEEEEEecCCC----CceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 999999876531 223332 222221110 011 00 1 1345789999999999999999999
Q ss_pred ecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEE
Q 012522 359 INEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436 (461)
Q Consensus 359 iheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~ 436 (461)
+|+++........+.||++.+++..+ +..+||+.++++...+.+++++- +++.+++.++...++|....+++|+
T Consensus 237 ~H~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gh~~~as~~~~L~~~~~~~--~~~~g~~vl~~~~G~G~t~~~~~l~ 310 (313)
T 1zow_A 237 PHQANIRIMESARERLGISKDKMSVS--VNKYGNTSAASIPLSIDQELKNG--KLKDDDTIVLVGFGGGLTWGAMTIK 310 (313)
T ss_dssp ECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTT--CCCTTCEEEEEEEETTTEEEEEEEE
T ss_pred EcCCCHHHHHHHHHHhCCCHHHHHHh--HhhhCchHHHHHHHHHHHHHHcC--CCCCCCEEEEEEEchhhhheEEEEE
Confidence 99999998888899999998776543 56799999999998888876652 2335566666665444433455554
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-27 Score=265.65 Aligned_cols=269 Identities=20% Similarity=0.259 Sum_probs=211.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCe----EEEEeecCCCCc-----------------cchHHHHHHHHcCCCCCCCeEE
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGST-----------------RAMECRMAAFYAGFPETVPLRT 132 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~----vi~g~~~~~~~~-----------------~~~~a~~ia~~lGl~~~~~~~~ 132 (461)
..+|+.+++++||+++|+++++||. |++|+..+++.. ....+..++..+|+ ++|+++
T Consensus 95 ~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~t 172 (915)
T 2qo3_A 95 QQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGL--EGPSIS 172 (915)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTB--CSCEEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCC--CCCEEE
Confidence 4689999999999999999999995 999987766420 11467889999999 579999
Q ss_pred eCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHH
Q 012522 133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE 212 (461)
Q Consensus 133 v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~ 212 (461)
|+++|+|++.||..|++.|++|++|++|++|+|.++.... ..+
T Consensus 173 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~---------------------~~~---------------- 215 (915)
T 2qo3_A 173 VDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGV---------------------FVD---------------- 215 (915)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHH---------------------HHH----------------
T ss_pred ECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHH---------------------HHH----------------
Confidence 9999999999999999999999999999999999876100 000
Q ss_pred HHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCccccCCC
Q 012522 213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNA 290 (461)
Q Consensus 213 ~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~lt~~~~ 290 (461)
+. ..+ .+++|.. ++| ||. +|++
T Consensus 216 --------~~------~~~------------------------~ls~~g~------------~~~-Fd~~adG~v----- 239 (915)
T 2qo3_A 216 --------FS------RQR------------------------ALAADGR------------SKA-FGAGADGFG----- 239 (915)
T ss_dssp --------HH------TTT------------------------CBCSSCC------------CCT-TBTTCCCBC-----
T ss_pred --------Hh------hhc------------------------ccCCCCC------------ccc-ccCCCCcee-----
Confidence 00 000 1222322 344 654 5666
Q ss_pred CcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC-----CCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChH
Q 012522 291 SQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS-----VMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFAS 365 (461)
Q Consensus 291 ~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-----~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~ 365 (461)
+|||++++||++.+.|.+.|.+++++|.|++....... ..+.+...+++++|+++|++++|||+||.|++++.
T Consensus 240 --~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~ 317 (915)
T 2qo3_A 240 --FSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTA 317 (915)
T ss_dssp --BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCT
T ss_pred --ecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCc
Confidence 99999999999999999999999999999988653221 12235678999999999999999999999988764
Q ss_pred H----H-HHHHHHcCCC---CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC----------------------
Q 012522 366 Q----Y-VYCIKKLGLD---PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK---------------------- 414 (461)
Q Consensus 366 ~----~-~~~~e~LGl~---~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~---------------------- 414 (461)
. + ....+.++.. ..++|+++++.++||+.||+|+.++++++.+|+++ +|
T Consensus 318 ~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~~~~~~~~~ 397 (915)
T 2qo3_A 318 LGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGGVALL 397 (915)
T ss_dssp TTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCCSSSSEEEC
T ss_pred cCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCceeee
Confidence 2 2 2234566654 35799999999999999999999999999999986 10
Q ss_pred ----------CCCEEEEEecccCcceeEEEEEEcc
Q 012522 415 ----------DCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 415 ----------~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
+.+++++++++-||.+.++||++..
T Consensus 398 ~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 432 (915)
T 2qo3_A 398 AGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAP 432 (915)
T ss_dssp SSCEECCSSSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred cCCcccccCCCCcEEEEeeecCCCceEEEEEeecc
Confidence 2368888888778889999998764
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-27 Score=264.35 Aligned_cols=268 Identities=21% Similarity=0.302 Sum_probs=209.7
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCe----EEEEeecCCCCc------------------cchHHHHHHHHcCCCCCCCeEE
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGST------------------RAMECRMAAFYAGFPETVPLRT 132 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id~----vi~g~~~~~~~~------------------~~~~a~~ia~~lGl~~~~~~~~ 132 (461)
.+|+.+++++||+++|+++++||. |++|+..+++.. ....+..++..+|+ ++|+++
T Consensus 117 ~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~t 194 (917)
T 2hg4_A 117 QRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGL--EGPAMT 194 (917)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCC--CCCeEe
Confidence 578999999999999999999995 899988766431 01367789999999 579999
Q ss_pred eCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHH
Q 012522 133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE 212 (461)
Q Consensus 133 v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~ 212 (461)
|+++|+|++.||.+|++.|++|++|++|++|+|.++..... .+
T Consensus 195 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~---------------------~~---------------- 237 (917)
T 2hg4_A 195 VDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAF---------------------TE---------------- 237 (917)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHH---------------------HH----------------
T ss_pred ecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhh---------------------Hh----------------
Confidence 99999999999999999999999999999999998761100 00
Q ss_pred HHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCccccCCC
Q 012522 213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNA 290 (461)
Q Consensus 213 ~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~lt~~~~ 290 (461)
+ ... -.+++|. .++| ||. ||++
T Consensus 238 --------~------~~~------------------------~~ls~~g------------~~~p-Fd~~adG~~----- 261 (917)
T 2hg4_A 238 --------F------RSQ------------------------GGLAADG------------RCKP-FSKAADGFG----- 261 (917)
T ss_dssp --------H------TTS------------------------SCBCTTS------------CCCT-TBTTCCCBC-----
T ss_pred --------h------hhc------------------------cCcCCcc------------ccCc-ccccccCCC-----
Confidence 0 000 0133333 3445 653 5555
Q ss_pred CcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCC-----CCcHHHHHHHHHHHcCCCCCCccEEEecCCChH
Q 012522 291 SQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM-----GIGPAVAIPAAVKSAGLQIDDINLFEINEAFAS 365 (461)
Q Consensus 291 ~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~-----~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~ 365 (461)
++||++++||++.+.|.+.|.+++++|.|++......... +.+...+++++|+++|++++|||++|.|++++.
T Consensus 262 --~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~ 339 (917)
T 2hg4_A 262 --LAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTR 339 (917)
T ss_dssp --BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCT
T ss_pred --CcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCc
Confidence 9999999999999999999999999999998876433221 234568999999999999999999999999985
Q ss_pred H----HHH-HHHHcCCC---CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C-----------------------
Q 012522 366 Q----YVY-CIKKLGLD---PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G----------------------- 413 (461)
Q Consensus 366 ~----~~~-~~e~LGl~---~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~----------------------- 413 (461)
. +.. ..+.+|.. ..++|+++++..+||+.+|+|+..+++++++|+++ +
T Consensus 340 ~gD~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~~~v~ 419 (917)
T 2hg4_A 340 LGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVV 419 (917)
T ss_dssp THHHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---CCEEC
T ss_pred cCcHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccccceeec
Confidence 2 222 22334542 35789999999999999999999999999999976 0
Q ss_pred ------C---CCCEEEEEecccCcceeEEEEEEcc
Q 012522 414 ------K---DCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 414 ------~---~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
| +.+++++++++-||.+.++||++..
T Consensus 420 ~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 454 (917)
T 2hg4_A 420 SQARSWPAGERPRRAGVSSFGISGTNAHVIVEEAP 454 (917)
T ss_dssp CSCEECCCCSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred CCcccCCCCCCCCEEEEeeecCCCceEEEEeccCC
Confidence 1 2367888888778889999998754
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=231.09 Aligned_cols=245 Identities=20% Similarity=0.154 Sum_probs=188.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
++.+..+|+.+|+++||+++|+++++||.|++|+.+++.. .+..+..++..+|+ ++|+++++++|+|++.||..|++
T Consensus 46 ~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~-~~~~a~~v~~~lgl--~~~~~~v~~aCas~~~al~~A~~ 122 (322)
T 1ub7_A 46 EDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDAL-FPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHA 122 (322)
T ss_dssp TTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEE-ESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCC--CCEEEeeCccchHHHHHHHHHHH
Confidence 4678999999999999999999999999999999887654 56688999999999 68999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.+|++|++|+|.++...
T Consensus 123 ~i~~g~~~~vlv~g~e~~s~~~---------------------------------------------------------- 144 (322)
T 1ub7_A 123 LVEAGLAQKVLAVGAEALSKII---------------------------------------------------------- 144 (322)
T ss_dssp HHHTTSCSEEEEEEEECGGGTS----------------------------------------------------------
T ss_pred HHHcCCCCEEEEEEechhcccc----------------------------------------------------------
Confidence 9999999999999999987510
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-CCccccCCCCcccccceEEEEcchhHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLA 308 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A 308 (461)
. | +|+ ++++ +||||+|+||++.+.
T Consensus 145 ----~------------------------------------------~-~d~~~~~~-------~GdGA~A~vL~~~~~- 169 (322)
T 1ub7_A 145 ----D------------------------------------------W-NDRATAVL-------FGDGGGAAVVGKVRE- 169 (322)
T ss_dssp ----C------------------------------------------T-TCHHHHTT-------BCCEEEEEEEECCCT-
T ss_pred ----C------------------------------------------h-hhccccee-------eccccEEEEEEecCC-
Confidence 0 0 110 1223 899999999987653
Q ss_pred HhcCCCeeEEEEE-eeeecc----------CCCC---------CC--------CcHHHHHHHHHHHcCCCCCCccEEEec
Q 012522 309 VQKGLPILGVFRS-FSAVGV----------DPSV---------MG--------IGPAVAIPAAVKSAGLQIDDINLFEIN 360 (461)
Q Consensus 309 ~~~g~~~~a~i~g-~~~~~~----------~p~~---------~~--------~~~~~ai~~aL~~AGl~~~DID~~eih 360 (461)
+..+++.... .+.... .|.. .+ .....+++++|+++|++++|||+|+.|
T Consensus 170 ---~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H 246 (322)
T 1ub7_A 170 ---GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPH 246 (322)
T ss_dssp ---TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred ---CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 1234443322 111100 0221 01 234678999999999999999999999
Q ss_pred CCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 361 EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 361 eafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.+........+.||++.+++..+ +..+||+.++++...+.+++++- +++.+++.++...+.|+...+++|+.
T Consensus 247 ~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gh~~~As~~~~l~~~l~~g--~~~~g~~~l~~~~G~G~~~~~~vl~~ 319 (322)
T 1ub7_A 247 QANLRIIDAARERLGLPWERVAVN--VDRYGNTSTASIPLALKEAVDAG--RIREGDHVLLVSFGAGLTWAAAVLTW 319 (322)
T ss_dssp CSCHHHHHHHHHTTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHT--SSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHH--HHhhCcHHHHHHHHHHHHHHHhC--CCCCCCEEEEEEEChhheeEEEEEEe
Confidence 999988888889999998877543 45799999999998887776542 23356677777766666666777764
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-26 Score=228.46 Aligned_cols=241 Identities=17% Similarity=0.162 Sum_probs=183.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAI 151 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I 151 (461)
.+..+|+.+|+++||+++|+++++||.|++++.+++.. .++.+..++..+|++. .|+++++++|+|++.||..|+++|
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~-~~~~a~~v~~~lgl~~-~~~~~v~~~C~s~~~al~~A~~~i 125 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEELDLIILATLTPQKR-FPSTACLVQAQLKAKG-VYAFDISAACSGFIYALDIADSFI 125 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSS-SSCHHHHHHHHHTCTT-CEEEEEECGGGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCCC-ceEEecCccchHHHHHHHHHHHHH
Confidence 68899999999999999999999999999999887765 5678999999999953 699999999999999999999999
Q ss_pred HcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCC
Q 012522 152 KAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231 (461)
Q Consensus 152 ~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag 231 (461)
++|.+|++|++|+|.++..
T Consensus 126 ~~g~~~~vlv~g~e~~s~~------------------------------------------------------------- 144 (309)
T 2ebd_A 126 KSGKAKNVLVIGAEKLSEA------------------------------------------------------------- 144 (309)
T ss_dssp HTTSCSEEEEEEEEEGGGT-------------------------------------------------------------
T ss_pred HCCCCCEEEEEEecccccc-------------------------------------------------------------
Confidence 9999999999999998761
Q ss_pred CCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-CCccccCCCCcccccceEEEEcchhHHHh
Q 012522 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 232 ~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
++ | .+. ++++ ++|||+|+||++.+.++
T Consensus 145 -~~------------~-------------------------------~~~~~~~~-------~gdGaaA~vL~~~~~~~- 172 (309)
T 2ebd_A 145 -VD------------W-------------------------------EDRSTCVL-------FGDGAGAVVVTRSEDKS- 172 (309)
T ss_dssp -CC------------T-------------------------------TCTTTTTT-------BCEEEEEEEEEECSSSC-
T ss_pred -cC------------c-------------------------------cchhhccc-------cccccEEEEEEecCCCC-
Confidence 00 0 000 1233 89999999999876431
Q ss_pred cCCCeeEEEEEeeeec----cCC-----CCCCC--------cHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHH
Q 012522 311 KGLPILGVFRSFSAVG----VDP-----SVMGI--------GPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKK 373 (461)
Q Consensus 311 ~g~~~~a~i~g~~~~~----~~p-----~~~~~--------~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~ 373 (461)
.+++...+..... ..| ...+. ....+++++|+++|++++|||+|++|+++........+.
T Consensus 173 ---~i~~~~~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~~~~~~~ 249 (309)
T 2ebd_A 173 ---DILATRMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEK 249 (309)
T ss_dssp ---EEEEEEEEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHH
T ss_pred ---ceeEEEEEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHH
Confidence 2333333322111 011 10111 345789999999999999999999999999888888899
Q ss_pred cCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCccee-EEEE
Q 012522 374 LGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA-AAVF 435 (461)
Q Consensus 374 LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~-A~v~ 435 (461)
||++++++..+ +..+||+.++++...+.+++++ ++++.+++.++... |.|..+ +++|
T Consensus 250 lg~~~~~~~~~--~~~~Gh~~~As~~~~L~~~~~~--g~~~~G~~~l~~~~-G~G~~~~~~~l 307 (309)
T 2ebd_A 250 LNIPKEKVFVN--IQKYGNTSAASIPIALHEAIKE--GKVKRGDLILMTAM-GGGLTWGAVLL 307 (309)
T ss_dssp TTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHT--TCCCTTCEEEEEEE-ETTTEEEEEEE
T ss_pred hCCCHHHhhhh--HhhhcchHHHHHHHHHHHHHHc--CCCCCCCEEEEEEE-chhhhhEEEEE
Confidence 99998776543 4679999999999999888765 23334555666554 445444 4444
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-26 Score=230.82 Aligned_cols=248 Identities=19% Similarity=0.185 Sum_probs=182.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHH
Q 012522 68 GFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADV 147 (461)
Q Consensus 68 ~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A 147 (461)
..++.+..+|+.+|+++||+++|+++++||.|++++.++++. .+..+..++..+|++ ++|+++++++|+|++.||..|
T Consensus 55 ~~~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~aC~s~~~al~~A 132 (335)
T 1u6e_A 55 AADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQ-TPPAAPMVAASLGAK-GILGFDLSAGAAGFGYALGAA 132 (335)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCS-SSCHHHHHHHHHTCT-TSEEEEEECGGGHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHhCCC-CCcEeeeccccHHHHHHHHHH
Confidence 345789999999999999999999999999999999887765 577899999999995 589999999999999999999
Q ss_pred HHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHh
Q 012522 148 ATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAA 227 (461)
Q Consensus 148 ~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a 227 (461)
+++|++|.+|++||+|+|.++..
T Consensus 133 ~~~i~~g~~~~vLv~g~e~~s~~--------------------------------------------------------- 155 (335)
T 1u6e_A 133 ADMIRGGGAATMLVVGTEKLSPT--------------------------------------------------------- 155 (335)
T ss_dssp HHHHHHTSCSSEEEEEEEECGGG---------------------------------------------------------
T ss_pred HHHHHcCCCCEEEEEEEcccccc---------------------------------------------------------
Confidence 99999999999999999998761
Q ss_pred hhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhH
Q 012522 228 TASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSL 307 (461)
Q Consensus 228 ~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~ 307 (461)
+ +| +++ .++..++|||+|+||++.+.
T Consensus 156 -----~------------------------------------------~~-~d~------~~~~~~gDGA~A~vl~~~~~ 181 (335)
T 1u6e_A 156 -----I------------------------------------------DM-YDR------GNCFIFADGAAAVVVGETPF 181 (335)
T ss_dssp -----C------------------------------------------CT-TCT------TTTTTBCEEEEEEEEEECSS
T ss_pred -----c------------------------------------------Cc-ccc------ccceEeccccEEEEEEecCC
Confidence 0 00 111 12233899999999987653
Q ss_pred HHhcCCCeeEEEEEe-eeec----c---------CCC------CC-C--------CcHHHHHHHHHHHcCCCCCCccEEE
Q 012522 308 AVQKGLPILGVFRSF-SAVG----V---------DPS------VM-G--------IGPAVAIPAAVKSAGLQIDDINLFE 358 (461)
Q Consensus 308 A~~~g~~~~a~i~g~-~~~~----~---------~p~------~~-~--------~~~~~ai~~aL~~AGl~~~DID~~e 358 (461)
.+ ++..+.+. +... . .|. .+ + .....+++++|+++|++++|||+|+
T Consensus 182 ---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~dId~~~ 256 (335)
T 1u6e_A 182 ---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFV 256 (335)
T ss_dssp ---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred ---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 12 22222221 1100 0 110 00 1 1335789999999999999999999
Q ss_pred ecCCChHHHHHHHHHcCCCCC-CcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 359 INEAFASQYVYCIKKLGLDPE-KVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 359 iheafa~~~~~~~e~LGl~~~-~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+|+++........+.||++++ ++..+ ...+||+.+++....+.+++.+- +++.++++++...++|+...+++|+.
T Consensus 257 ~H~~~~~~~~~~~~~lg~~~~~~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~--~~~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 257 PHQANSRINELLVKNLQLRPDAVVAND--IEHTGNTSAASIPLAMAELLTTG--AAKPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp ECCSCHHHHHHHHHHHTCCTTCEECCT--HHHHCBCGGGHHHHHHHHHHHHT--SSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred ECCCCHHHHHHHHHHcCCCchhhhhhh--hhhhCcHHHHHHHHHHHHHHHcC--CCCCCCEEEEEEEehhheeEEEEEEe
Confidence 999999999999999999988 66544 35689999999654443333321 22345677776654444444555543
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-26 Score=227.65 Aligned_cols=254 Identities=20% Similarity=0.190 Sum_probs=183.5
Q ss_pred eccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCC
Q 012522 58 RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQC 137 (461)
Q Consensus 58 ~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~C 137 (461)
||++.+ +....++++..+|+.+|+++||+++|+++++||.|+++++++++. .+..+..++..+|++.++++++++.+|
T Consensus 50 rtgi~~-r~~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lgl~~~~~~~~v~~~C 127 (333)
T 4dfe_A 50 RTGIHA-RYFAEPDVTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFV-FPSTACLLQNKLGIRNHGAAFDVQAVC 127 (333)
T ss_dssp HHCCSE-EEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSS-BSCHHHHHHHHTTCCSCCEEEEEECGG
T ss_pred hcCceE-EEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHhCCCCCCcEEEeCccc
Confidence 455554 234456889999999999999999999999999999999988776 678899999999997689999999999
Q ss_pred chHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHH
Q 012522 138 SSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAA 217 (461)
Q Consensus 138 aSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a 217 (461)
+|++.||..|+++|++|.++++||+|+|.+|..
T Consensus 128 ~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~----------------------------------------------- 160 (333)
T 4dfe_A 128 SGFAYAVATADSFIRSGQHRTALVIGAETFSRI----------------------------------------------- 160 (333)
T ss_dssp GHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGG-----------------------------------------------
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEEeeccccc-----------------------------------------------
Confidence 999999999999999999999999999999871
Q ss_pred HHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccc
Q 012522 218 VESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGA 297 (461)
Q Consensus 218 ~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGA 297 (461)
++ .+ ++ .++..+||||
T Consensus 161 ---------------~~------------------------~~-------------------d~------~~~~lfGDGA 176 (333)
T 4dfe_A 161 ---------------LD------------------------FK-------------------DR------TTCVLFGDGA 176 (333)
T ss_dssp ---------------CC------------------------TT-------------------CT------TTTTTBCEEE
T ss_pred ---------------cC------------------------cc-------------------cc------cceeeecccc
Confidence 00 00 00 0122389999
Q ss_pred eEEEEcchhHHHhcCCCeeEEEEEeeeecc----CC-----------C--CC-C--------CcHHHHHHHHHHHcCCCC
Q 012522 298 GAVLLMKRSLAVQKGLPILGVFRSFSAVGV----DP-----------S--VM-G--------IGPAVAIPAAVKSAGLQI 351 (461)
Q Consensus 298 aAvvL~s~~~A~~~g~~~~a~i~g~~~~~~----~p-----------~--~~-~--------~~~~~ai~~aL~~AGl~~ 351 (461)
+|+||.+.+. ..++........... .| . .+ + .....+++++|+++|+++
T Consensus 177 ~A~vl~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~ 251 (333)
T 4dfe_A 177 GAVILQASDE-----PGVLASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLSA 251 (333)
T ss_dssp EEEEEEEESS-----CSEEEEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred EEEEEEEcCC-----CCeEEEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999987651 122222211111100 00 0 00 0 123467899999999999
Q ss_pred CCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccC-CCCCEEEEEecccCcce
Q 012522 352 DDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRG-KDCRFGVISMCIGSGMG 430 (461)
Q Consensus 352 ~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~-~~~~~gl~~~~~g~G~g 430 (461)
+|||+|.+|+++........+.||++++++..+ .--+||...++-...+.+++.+ +++ ++.++.++.+ |.|+.
T Consensus 252 ~did~~~~Hq~~~~i~~~~~~~lgl~~~~~~~~--l~~~GNt~sasi~~~L~~~~~~--g~~~~Gd~vll~~~--G~G~t 325 (333)
T 4dfe_A 252 EQIDWLIPHQANIRIMQSTCRKLGLPQERMIVT--VGEHGNTSAASIPLALDVAVRD--GRIKRGQNVLIEGV--GGGFT 325 (333)
T ss_dssp GGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHT--TCSCTTCEEEEEEE--ETTTE
T ss_pred HHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhh--HHhcCchHHHHHHHHHHHHHHc--CCCCCCCEEEEEEE--chhhe
Confidence 999999999999999999999999999987654 3457888888754444443332 122 2344444443 66666
Q ss_pred eEEEE
Q 012522 431 AAAVF 435 (461)
Q Consensus 431 ~A~v~ 435 (461)
++.++
T Consensus 326 ~~~~l 330 (333)
T 4dfe_A 326 WGASV 330 (333)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 54443
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-24 Score=217.30 Aligned_cols=243 Identities=16% Similarity=0.145 Sum_probs=177.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHH
Q 012522 69 FKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVA 148 (461)
Q Consensus 69 ~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~ 148 (461)
.+++++.+|+.+|+++||+++|+++++||.|+++++++++. .+..+..++..+|++ ++++++++.+|+|+++||..|+
T Consensus 53 ~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~-~~~~~~v~~~C~s~~~al~~A~ 130 (323)
T 3il3_A 53 AEDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHA-YPSAACQVQGLLNID-DAISFDLAAACTGFVYALSVAD 130 (323)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHTTCS-SCEEEEECCGGGHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CccHHHHHHHHhCCC-CccEEEECCccHHHHHHHHHHH
Confidence 35789999999999999999999999999999999988766 677899999999995 6899999999999999999999
Q ss_pred HHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhh
Q 012522 149 TAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAAT 228 (461)
Q Consensus 149 ~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~ 228 (461)
++|++|.++++||+|+|.+|..
T Consensus 131 ~~i~~g~~~~vLvvg~e~~s~~---------------------------------------------------------- 152 (323)
T 3il3_A 131 QFIRAGKVKKALVIGSDLNSRK---------------------------------------------------------- 152 (323)
T ss_dssp HHHHTTSCSEEEEEEEEEGGGS----------------------------------------------------------
T ss_pred HHHHCCCCCEEEEEEeeccccc----------------------------------------------------------
Confidence 9999999999999999999871
Q ss_pred hCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHH
Q 012522 229 ASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLA 308 (461)
Q Consensus 229 ~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A 308 (461)
++ .+ ++ ..+..+||||+|+||...+.
T Consensus 153 ----~~------------------------~~-------------------d~------~~~~lfGDGA~A~vl~~~~~- 178 (323)
T 3il3_A 153 ----LD------------------------ET-------------------DR------STVVLFGDGAGAVILEASEQ- 178 (323)
T ss_dssp ----CC------------------------TT-------------------CT------TTTTTBCEEEEEEEEEEESS-
T ss_pred ----cC------------------------cc-------------------cc------ccccccccceEEEEEEEcCC-
Confidence 00 00 00 01223799999999987641
Q ss_pred HhcCCCeeEEEEEeeeecc----CCC---------CC-CCc----------HHHHHHHHHHHcCCCCCCccEEEecCCCh
Q 012522 309 VQKGLPILGVFRSFSAVGV----DPS---------VM-GIG----------PAVAIPAAVKSAGLQIDDINLFEINEAFA 364 (461)
Q Consensus 309 ~~~g~~~~a~i~g~~~~~~----~p~---------~~-~~~----------~~~ai~~aL~~AGl~~~DID~~eiheafa 364 (461)
..++........... -|. .+ ..+ ...+++++|+++|++++|||+|.+|+++.
T Consensus 179 ----~~i~~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~ 254 (323)
T 3il3_A 179 ----EGIISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLLANNLDKKDLDWLVPHQANL 254 (323)
T ss_dssp ----CCEEEEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHHTTTCCTTTCCEEEECCSCH
T ss_pred ----CCeEEEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH
Confidence 122222222111000 010 00 001 23578899999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccC-CCCCEEEEEecccCcceeEEEE
Q 012522 365 SQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRG-KDCRFGVISMCIGSGMGAAAVF 435 (461)
Q Consensus 365 ~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~-~~~~~gl~~~~~g~G~g~A~v~ 435 (461)
.......+.||++++++..+ .--+||...++-...+.+++.+ +++ +|.++.++.+ |.|+.++..+
T Consensus 255 ~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~--g~~~~Gd~vll~~~--G~G~t~~~~~ 320 (323)
T 3il3_A 255 RIITATAKKLEMDMSQVVVT--LDKYANNSAATVPVALDEAIRD--GRIQRGQLLLLEAF--GGGWTWGSAL 320 (323)
T ss_dssp HHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHT--TSSCTTCEEEEEEE--ETTTEEEEEE
T ss_pred HHHHHHHHHcCcCHHHhhcc--HhhcCchHHHHHHHHHHHHHHc--CCCCCCCEEEEEEE--ehhheeEEEE
Confidence 99999999999999987654 3457888888754444443332 122 2344444443 5565554433
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.5e-25 Score=219.08 Aligned_cols=242 Identities=17% Similarity=0.183 Sum_probs=182.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
++.+..+|+.+|+++||+++|+++++||.|++|+.+++.. .+..+..++..+|++ .+|+++++++|+|++.||..|++
T Consensus 47 ~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~aCas~~~al~~A~~ 124 (317)
T 1hnj_A 47 PNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHA-FPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSVADQ 124 (317)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHHTCC-SSCEEEECCGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCeEEeeCcccHHHHHHHHHHHH
Confidence 4778999999999999999999999999999999888765 567899999999995 38999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.+|++|++|+|.++...
T Consensus 125 ~i~~g~~~~vlv~g~e~~s~~~---------------------------------------------------------- 146 (317)
T 1hnj_A 125 YVKSGAVKYALVVGSDVLARTC---------------------------------------------------------- 146 (317)
T ss_dssp HHHTTSCSEEEEEEEECHHHHS----------------------------------------------------------
T ss_pred HHHCCCCCEEEEEEechhcccC----------------------------------------------------------
Confidence 9999999999999999987510
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-CCccccCCCCcccccceEEEEcchhHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLA 308 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A 308 (461)
+ | .++ ++++ +||||+|+||++.+.
T Consensus 147 ----~------------~-------------------------------~d~~~~~~-------~GdGA~A~vL~~~~~- 171 (317)
T 1hnj_A 147 ----D------------P-------------------------------TDRGTIII-------FGDGAGAAVLAASEE- 171 (317)
T ss_dssp ----C------------T-------------------------------TCHHHHTT-------BCCEEEEEEEEEESS-
T ss_pred ----C------------c-------------------------------hhccccee-------eccccEEEEEEecCC-
Confidence 0 0 000 1223 799999999987652
Q ss_pred HhcCCCeeEEEEEeeeec----cCCC-------------CCCC--------cHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 012522 309 VQKGLPILGVFRSFSAVG----VDPS-------------VMGI--------GPAVAIPAAVKSAGLQIDDINLFEINEAF 363 (461)
Q Consensus 309 ~~~g~~~~a~i~g~~~~~----~~p~-------------~~~~--------~~~~ai~~aL~~AGl~~~DID~~eiheaf 363 (461)
..+++.+.+..... ..|. ..+. ....+++++|+++|++++|||+|+.|..+
T Consensus 172 ----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~ 247 (317)
T 1hnj_A 172 ----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQAN 247 (317)
T ss_dssp ----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSC
T ss_pred ----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC
Confidence 23555554422111 0111 0111 34578999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEE
Q 012522 364 ASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVF 435 (461)
Q Consensus 364 a~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~ 435 (461)
........+.||++.+++..+ +-.+||..++++...+.+++.+- +.+.++..++... |.|+.++.++
T Consensus 248 ~~~~d~i~~~lg~~~~~~~~~--~~~~Gn~~~As~~~~L~~~~~~~--~~~~G~~vll~~~-G~G~t~~~~~ 314 (317)
T 1hnj_A 248 LRIISATAKKLGMSMDNVVVT--LDRHGNTSAASVPCALDEAVRDG--RIKPGQLVLLEAF-GGGFTWGSAL 314 (317)
T ss_dssp HHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTT--CSCTTCEEEEEEE-ETTTEEEEEE
T ss_pred HHHHHHHHHHcCCCHHHhHhh--HhhhCcHHHHHHHHHHHHHHHhC--CCCCCCEEEEEEE-chhheeEEEE
Confidence 998888889999998877432 45689999999887776665431 2223444455443 4555544433
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=99.93 E-value=6.6e-25 Score=246.39 Aligned_cols=264 Identities=23% Similarity=0.253 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC------------------ccchHHHHHHHHcCCCCCCCeEE
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS------------------TRAMECRMAAFYAGFPETVPLRT 132 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~------------------~~~~~a~~ia~~lGl~~~~~~~~ 132 (461)
..|+.+++++||+++|++++++| +|++|+...++. .....+..++..+|+ ++|+++
T Consensus 81 ~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~GPs~t 158 (965)
T 3hhd_A 81 LRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDF--RGPSIA 158 (965)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCC--CCCeee
Confidence 56999999999999999999999 788887655431 023467889999999 579999
Q ss_pred eCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHH
Q 012522 133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE 212 (461)
Q Consensus 133 v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~ 212 (461)
|+++|+|++.||.+|++.|++|++|++|++|+|.++.... ..+
T Consensus 159 vdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~---------------------~~~---------------- 201 (965)
T 3hhd_A 159 LDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNT---------------------SVQ---------------- 201 (965)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHH---------------------HHH----------------
T ss_pred ecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH---------------------HHH----------------
Confidence 9999999999999999999999999999999999886110 000
Q ss_pred HHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCccccCCC
Q 012522 213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNA 290 (461)
Q Consensus 213 ~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~lt~~~~ 290 (461)
+.+ .+ .+++|. .++| ||. +|++
T Consensus 202 --------~~~------~~------------------------~ls~~g------------~~~~-Fd~~adG~~----- 225 (965)
T 3hhd_A 202 --------FLR------LG------------------------MLSPEG------------TCKA-FDTAGNGYC----- 225 (965)
T ss_dssp --------HHH------HT------------------------CBCTTC------------CCCT-TBTTCCSBC-----
T ss_pred --------HHh------cc------------------------CcCCCC------------cccc-chhccCCcc-----
Confidence 000 00 122232 2344 664 7887
Q ss_pred CcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCC------CCcHHHHHHHHHHHcCCCCCCccEEEecCCCh
Q 012522 291 SQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM------GIGPAVAIPAAVKSAGLQIDDINLFEINEAFA 364 (461)
Q Consensus 291 ~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~------~~~~~~ai~~aL~~AGl~~~DID~~eiheafa 364 (461)
++||++++||++.+.|+ ++++.|.|++.+....... +.+...+++++|+++|++++||||||.|..++
T Consensus 226 --~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT 299 (965)
T 3hhd_A 226 --RSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGT 299 (965)
T ss_dssp --BBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCC
T ss_pred --ccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCC
Confidence 89999999999998875 4789999998876543322 23467899999999999999999999999988
Q ss_pred H----HHHHHH-HHcCCC-CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C--------C---------------
Q 012522 365 S----QYVYCI-KKLGLD-PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G--------K--------------- 414 (461)
Q Consensus 365 ~----~~~~~~-e~LGl~-~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~--------~--------------- 414 (461)
. .+...+ +.++-. ..++.+++-+..+||+.||+|+.+++.++.+|+.+ + |
T Consensus 300 ~~gD~~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v~ 379 (965)
T 3hhd_A 300 KVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVV 379 (965)
T ss_dssp TTHHHHHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTSEEEC
T ss_pred CCCCHHHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCceeec
Confidence 3 344333 333322 34567777778889999999999999999999986 1 1
Q ss_pred ------CCCEEEEEecccCcceeEEEEEEcc
Q 012522 415 ------DCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 415 ------~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
..+++.+++++-||.+.++||+...
T Consensus 380 ~~~~~~~~~~a~v~sfG~gG~Nah~il~~~~ 410 (965)
T 3hhd_A 380 DQPLPVRGGNVGINSFGFGGSNVHIILRPNT 410 (965)
T ss_dssp CSCEECCSCEEEEEEECTTSEEEEEEEEECC
T ss_pred CCCccCCCCeEEEecccCCCceEEEEeccCC
Confidence 1124566777778889999998764
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-25 Score=221.43 Aligned_cols=245 Identities=18% Similarity=0.099 Sum_probs=182.0
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
++.+..+|+.+|+++||+++|+++++||.|++|+.++++. .++.+..++..+|++ .+|+++++++|+|++.||..|++
T Consensus 56 ~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~-~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~ 133 (339)
T 1mzj_A 56 PDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVH-TPPLSVAIAHELGAD-NAGGFDLSAACAGFCHALSIAAD 133 (339)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCC-SSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CChHHHHHHHHhCCC-CccEEEccccchHHHHHHHHHHH
Confidence 4778999999999999999999999999999999888765 567889999999995 38999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.+|++||+|+|.++..
T Consensus 134 ~i~~G~~~~vLv~g~e~~s~~----------------------------------------------------------- 154 (339)
T 1mzj_A 134 AVESGGSRHVLVVATERMTDV----------------------------------------------------------- 154 (339)
T ss_dssp HHHHSSCSCEEEEEEEEGGGG-----------------------------------------------------------
T ss_pred HHHCCCCCEEEEEEEcccccc-----------------------------------------------------------
Confidence 999999999999999998751
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-CCccccCCCCcccccceEEEEcchhHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLA 308 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A 308 (461)
++ . .++ ++++ +||||+|+||++.+.
T Consensus 155 ---~~------------------------~-------------------~d~~~~~~-------~GdGA~A~vL~~~~~- 180 (339)
T 1mzj_A 155 ---ID------------------------L-------------------ADRSLSFL-------FGDGAGAAVVGPSDV- 180 (339)
T ss_dssp ---SC------------------------S-------------------SCTTTTTT-------BCEEEEEEEEEEESS-
T ss_pred ---cC------------------------c-------------------cccccceE-------eccCceEEEEEecCC-
Confidence 00 0 011 2334 899999999987642
Q ss_pred HhcCCCeeEEEE-Eeeeec----cC---CCC-------------CC--------CcHHHHHHHHHHHcCCCCCCccEEEe
Q 012522 309 VQKGLPILGVFR-SFSAVG----VD---PSV-------------MG--------IGPAVAIPAAVKSAGLQIDDINLFEI 359 (461)
Q Consensus 309 ~~~g~~~~a~i~-g~~~~~----~~---p~~-------------~~--------~~~~~ai~~aL~~AGl~~~DID~~ei 359 (461)
..+++... +.+... .. |.. .+ .....+++++|+++|++++|||+|+.
T Consensus 181 ----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~v~~ 256 (339)
T 1mzj_A 181 ----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTVGDLVAFVP 256 (339)
T ss_dssp ----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEE
T ss_pred ----CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 12322222 211110 00 110 01 23457899999999999999999999
Q ss_pred cCCChHHHHHHHHHcCCCCC-CcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 360 NEAFASQYVYCIKKLGLDPE-KVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 360 heafa~~~~~~~e~LGl~~~-~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+.+....-...+.||++.+ ++..+ .-.+||..++++...+.+++.+-+ ++.+++.++..++.|....+++|+.
T Consensus 257 H~~~~~~~d~i~~~lg~~~~~~~~~~--~~~~Gn~~sAs~~~~L~~~~~~g~--~~~G~~vll~~~G~G~t~~~~~l~~ 331 (339)
T 1mzj_A 257 HQANLRIIDVLVDRLGVPEHVVVSRD--AEDTGNTSSASVALALDRLVRSGA--VPGGGPALMIGFGAGLSYAGQALLL 331 (339)
T ss_dssp CCSCHHHHHHHHHHHTCCTTSEECCT--HHHHCBCTTHHHHHHHHHHHHHTS--SCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCHHHHHHHHHHhCCCccceeeeh--hhhcCchHHHHHHHHHHHHHHcCC--CCCCCEEEEEEEchhheeEEEEEEe
Confidence 99999888888899999988 76432 356899999998887776665422 2244555555544444344555543
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-25 Score=223.90 Aligned_cols=277 Identities=16% Similarity=0.115 Sum_probs=172.8
Q ss_pred eeccccccCCCCCCCC--CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeC
Q 012522 57 YRTAICKAKRGGFKDT--LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN 134 (461)
Q Consensus 57 ~~Tp~~r~~~G~~~~~--~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~ 134 (461)
.+|.+.+. .-...++ ++.+|+.+|+++||+++|++|++||.|++++++....+.+.++..++..+|++ ++++++++
T Consensus 36 ~~tGi~~r-~~a~~~e~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~-~~~~~~v~ 113 (357)
T 3s3l_A 36 KLRGIESV-TVASDAEEDAPPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGR-HVPAFGLA 113 (357)
T ss_dssp HHHCCCEE-ECCCSSGGGSHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCS-SSCEEEEE
T ss_pred HHcCceEE-EecCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCC-CCcEEEEc
Confidence 44555442 2222344 89999999999999999999999999999998421111335788999999995 68999999
Q ss_pred CCCchHHHHHHHHHHHHHcCCCC--EEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHH
Q 012522 135 RQCSSGLQAVADVATAIKAGLYD--IGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE 212 (461)
Q Consensus 135 ~~CaSgl~Al~~A~~~I~sG~~d--~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~ 212 (461)
.+|+|+++||..|+.+|++|.++ ++||+|+|.+|...
T Consensus 114 ~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~----------------------------------------- 152 (357)
T 3s3l_A 114 QRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPR----------------------------------------- 152 (357)
T ss_dssp CGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTT-----------------------------------------
T ss_pred CccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccc-----------------------------------------
Confidence 99999999999999999999999 99999999998400
Q ss_pred HHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCc
Q 012522 213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQ 292 (461)
Q Consensus 213 ~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~ 292 (461)
+.+ ++. .++..
T Consensus 153 --------------------~~~-------------------------------------------~~~------~~~~l 163 (357)
T 3s3l_A 153 --------------------IDR-------------------------------------------WNS------VDVTM 163 (357)
T ss_dssp --------------------CCT-------------------------------------------TTS------SSSCC
T ss_pred --------------------ccc-------------------------------------------ccc------cCCcc
Confidence 000 000 01223
Q ss_pred ccccceEEEEcchhHHHhcCCCeeEEEEEeeeecc----------CCC-----CC---C----------------C---c
Q 012522 293 VSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV----------DPS-----VM---G----------------I---G 335 (461)
Q Consensus 293 ~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~----------~p~-----~~---~----------------~---~ 335 (461)
+||||+|+||+..+.. ..++........... ++. .. + . .
T Consensus 164 fGDGA~A~vl~~~~~~----~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 239 (357)
T 3s3l_A 164 YGDGAAALVLSTRDGF----ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPDLTHRYIDL 239 (357)
T ss_dssp BCCEEEEEEEESSCCS----EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTTHHHHHHHH
T ss_pred cccccEEEEEecCCCC----CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhhhHHHHHHH
Confidence 8999999999875420 112221121111100 000 00 0 0 1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEe-cCCChHHHHHHHHHcCCCCCCcCCCCCcc-cccCchhhHHHHHHHHHHHHHHccC
Q 012522 336 PAVAIPAAVKSAGLQIDDINLFEI-NEAFASQYVYCIKKLGLDPEKVNVNGGAV-ALGHPLGATGARCVATLLSEMKRRG 413 (461)
Q Consensus 336 ~~~ai~~aL~~AGl~~~DID~~ei-heafa~~~~~~~e~LGl~~~~vn~~GG~~-~~Ghp~gatG~~~~~~~~~~L~~~~ 413 (461)
...+++++|+++|++++|||+|.+ |+++.. .....+.||++++++..+ .. .+||...++-...+.+++.+ +++
T Consensus 240 ~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~~~~~~lgl~~ek~~~~--~~~~~GNt~aAsipl~L~~~~~~--g~l 314 (357)
T 3s3l_A 240 LVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GHELHDLLGLPDERTSWA--YGRTTGHVGAGDQYAGLAHLVEN--ALV 314 (357)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SCCHHHHHTSCGGGBTHH--HHHHHCBCTTCHHHHHHHHHHHT--TCC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HHHHHHHcCCCHHHhHHH--hccccccchHhHHHHHHHHHHHc--CCC
Confidence 235788999999999999999996 999888 777889999999986531 01 24666666533333333221 123
Q ss_pred CCCCEEEEEecccCcceeEEEEEEccchhhhhcCCCCCccccc
Q 012522 414 KDCRFGVISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTHL 456 (461)
Q Consensus 414 ~~~~~gl~~~~~g~G~g~A~v~~~~~~~~~~~~~~~~~~~~~~ 456 (461)
+.+...++.. .|.|+.++.++.+......|+. ...++|||-
T Consensus 315 ~~Gd~vll~~-fG~G~t~~a~ll~~~~~p~~~~-~~~~~~~~~ 355 (357)
T 3s3l_A 315 QPGDRVLLFG-GGAGYTCTAAVVEILRMPAQCM-RGSRSHHHH 355 (357)
T ss_dssp CTTCEEEEEC-CBTTTEEEEEEEEECCCC--------------
T ss_pred CCCCEEEEEE-EchhhhheeeeEEeccCCCCCC-CCccccccc
Confidence 3344445544 3556665444444434455555 566677663
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-24 Score=216.48 Aligned_cols=247 Identities=16% Similarity=0.123 Sum_probs=181.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
+++++.+|+.+|+++||+++|+++++||.|+++++++++. .+..+..++..+|++.++++++++.+|+|++.||..|++
T Consensus 62 ~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~ 140 (354)
T 4efi_A 62 AQTSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYR-LPATAFVLQAELDLPASCLALDINLGCSGYPQALWLGMN 140 (354)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHTTCCTTSEEEEECCCTTHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCcCCCccEEeeCcccHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999988766 678899999999997679999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++++||+|+|.+|...
T Consensus 141 ~i~~g~~~~vLvvg~e~~s~~~---------------------------------------------------------- 162 (354)
T 4efi_A 141 LIQTGAAKRVLLAVGDTISKMI---------------------------------------------------------- 162 (354)
T ss_dssp HHHTTSCSEEEEEEEECGGGGC----------------------------------------------------------
T ss_pred HHHCCCCCEEEEEEechhcccC----------------------------------------------------------
Confidence 9999999999999999998710
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
+ ++ |+ ..+..+||||+|+||+..+..
T Consensus 163 ----~------------------------~~-------------------d~------~~~~lfGDGA~A~vl~~~~~~- 188 (354)
T 4efi_A 163 ----D------------------------PT-------------------DR------STSLLFGDAGTMTALETSNGD- 188 (354)
T ss_dssp ----C------------------------TT-------------------CH------HHHTTBCCEEEEEEEEECCSC-
T ss_pred ----C------------------------cc-------------------cc------ccccccccceeEEEEeecCCC-
Confidence 0 00 00 001127999999999875421
Q ss_pred hcCCCeeEEEEEeeeec----------cCCC--------------CCC-C----------cHHHHHHHHHHHcCCCCCCc
Q 012522 310 QKGLPILGVFRSFSAVG----------VDPS--------------VMG-I----------GPAVAIPAAVKSAGLQIDDI 354 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~~----------~~p~--------------~~~-~----------~~~~ai~~aL~~AGl~~~DI 354 (461)
..+.......... ..|. .+. . ....+++++|+++|++++||
T Consensus 189 ----~~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~di 264 (354)
T 4efi_A 189 ----AAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAVPKLVSRTLDIAGRDKDSY 264 (354)
T ss_dssp ----CEEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred ----CceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 1221111111100 0010 000 0 12357889999999999999
Q ss_pred cEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCccee-EE
Q 012522 355 NLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA-AA 433 (461)
Q Consensus 355 D~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~-A~ 433 (461)
|+|.+|+++........+.||++++++..+ .--+||...++-...+.+++.+-+-+ +|.++.++.+ |.|+.+ ++
T Consensus 265 d~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~-~Gd~vll~~f--G~G~t~~~~ 339 (354)
T 4efi_A 265 DAFLFHQANLFMLKHLAKKAGLPAERVPVN--IGEYGNTSCASIPLLITTELKDRLKE-ETLQLGMFGF--GVGYSWASA 339 (354)
T ss_dssp SEEEECCCCHHHHHHHHHHTTCCGGGSCCC--HHHHCBCGGGHHHHHHHHHSHHHHHH-SCEEEEEEEE--ETTTEEEEE
T ss_pred CEEEeCCCCHHHHHHHHHHhCcCHHHHHHH--HhhhCcHHHHHHHHHHHHHHHhCCCC-CCCEEEEEEE--chhhhheee
Confidence 999999999999999999999999987543 35689998888766666665542222 1334444443 556555 44
Q ss_pred EEEEc
Q 012522 434 VFERG 438 (461)
Q Consensus 434 v~~~~ 438 (461)
+|+-.
T Consensus 340 ll~~~ 344 (354)
T 4efi_A 340 ALAVG 344 (354)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 45443
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=217.74 Aligned_cols=244 Identities=18% Similarity=0.151 Sum_probs=179.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAI 151 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I 151 (461)
.+..+|+.+|+++||+++|+ ++||.|++++.++++. .+..+..++..+|++ .+|+++++++|+|++.||..|+++|
T Consensus 51 ~~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~-~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~~i 126 (331)
T 2x3e_A 51 LGSGDLALRAASAALASAGL--ERVDAVVLATSTGDFC-CPATAPRVAARLGLV-GALAFDLSAAATGFVYGLASVGSLI 126 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEE-ESCSHHHHHHHTTCT-TSEEEEEECGGGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCC-CChHHHHHHHHhCCC-CCcEEEEcCcChHHHHHHHHHHHHH
Confidence 67899999999999999999 8999999999887764 466788999999996 3899999999999999999999999
Q ss_pred HcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCC
Q 012522 152 KAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231 (461)
Q Consensus 152 ~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag 231 (461)
++|.+|++||+|+|.++...
T Consensus 127 ~~g~~~~vLv~g~e~~s~~~------------------------------------------------------------ 146 (331)
T 2x3e_A 127 SAGLADSALLVGVDTFSHTL------------------------------------------------------------ 146 (331)
T ss_dssp HTTSCSEEEEEEEECGGGGS------------------------------------------------------------
T ss_pred HcCCCCEEEEEEeeccccCC------------------------------------------------------------
Confidence 99999999999999987510
Q ss_pred CCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-CCccccCCCCcccccceEEEEcchhHHHh
Q 012522 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 232 ~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
+ .+ |+ ++++ +||||+|+||++.+.+
T Consensus 147 --~------------------------~~-------------------d~~~~~~-------~GdGA~A~vL~~~~~a-- 172 (331)
T 2x3e_A 147 --D------------------------PA-------------------DRSTRAL-------FGDGAGAVVLRAGDAE-- 172 (331)
T ss_dssp --C------------------------TT-------------------CHHHHHH-------BCCEEEEEEEEEECTT--
T ss_pred --C------------------------cc-------------------cccccee-------eccccEEEEEEecCCC--
Confidence 0 00 00 1223 7999999999876543
Q ss_pred cCCCeeEEEEEeeeeccC----CC-------------C---CC--------CcHHHHHHHHHHHcCCCCCCccEEEecCC
Q 012522 311 KGLPILGVFRSFSAVGVD----PS-------------V---MG--------IGPAVAIPAAVKSAGLQIDDINLFEINEA 362 (461)
Q Consensus 311 ~g~~~~a~i~g~~~~~~~----p~-------------~---~~--------~~~~~ai~~aL~~AGl~~~DID~~eihea 362 (461)
.+..+++..........+ |. . .+ .....+++++|+++|++++|||+|.+|+.
T Consensus 173 ~~~~i~~~~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~ 252 (331)
T 2x3e_A 173 EEGALLAFDLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQA 252 (331)
T ss_dssp STTBEEEEEEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCC
T ss_pred CCCceEEEEEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC
Confidence 122343333221111000 10 0 01 23457899999999999999999999999
Q ss_pred ChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 363 FASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 363 fa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+........+.||++.+++..+ .-.+||+.+++....+.+++.+-+ .+.+++.++...++|....+++|+-
T Consensus 253 ~~~~~d~~~~~lg~~~~~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~~--~~~G~~vll~~~G~G~~~~~~~l~~ 323 (331)
T 2x3e_A 253 NTRILAAVADQLDLPVERVVSN--IAEVGNTVAASIPLALAHGLRQGI--LRDGGNMVLTGFGAGLTWGSVALRW 323 (331)
T ss_dssp CHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTC--SCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CHHHHHHHHHHcCCCHHHHhhh--HhhhCcHHHHHHHHHHHHHHHhCC--CCCCCEEEEEEEeHHhhheeeEEEE
Confidence 9998888999999998876543 356999999998877766654422 2245556665544444344555544
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-25 Score=225.75 Aligned_cols=248 Identities=15% Similarity=0.141 Sum_probs=176.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe-CCCCchHHHHHHHHHH
Q 012522 71 DTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NRQCSSGLQAVADVAT 149 (461)
Q Consensus 71 ~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~CaSgl~Al~~A~~ 149 (461)
+.+..+|+.+|+++||+++|+++++||.|+++++++. . .+..+..++..+|++..++.+++ +++|+|++.||..|++
T Consensus 81 ~~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~ 158 (382)
T 1u0m_A 81 EREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGF-M-MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHD 158 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSC-C-SSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCC-C-CCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHH
Confidence 4466899999999999999999999999999998773 3 57788999999999655799999 9999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++++||+|+|.++...
T Consensus 159 ~i~~g~~~~vLv~g~e~~s~~~---------------------------------------------------------- 180 (382)
T 1u0m_A 159 FCTAYPEANALIVACEFCSLCY---------------------------------------------------------- 180 (382)
T ss_dssp HHHHSTTCEEEEEEEEEGGGGC----------------------------------------------------------
T ss_pred HHHcCCCCEEEEEEEeccchhc----------------------------------------------------------
Confidence 9999999999999999987610
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
+ | ++ .+.+.. + ++++ +||||+|+||++.+.
T Consensus 181 ----~------------~------------~d-----~~~~~~------~--~~~l-------fGDGA~A~vL~~~~~-- 210 (382)
T 1u0m_A 181 ----Q------------P------------TD-----LGVGSL------L--CNGL-------FGDGIAAAVVRGRGG-- 210 (382)
T ss_dssp ----C------------T------------TC-----CSHHHH------H--HHHH-------BCEEEEEEEEETTTC--
T ss_pred ----C------------c------------cc-----CCHHHh------h--ccch-------hcCCcEEEEEeccCC--
Confidence 0 0 00 000000 0 0223 799999999987642
Q ss_pred hcCCCeeEEEEEeeee----ccC----------------CCCC---CCcHHHHHHHHHHHcCCCCCCccEEEecCCChHH
Q 012522 310 QKGLPILGVFRSFSAV----GVD----------------PSVM---GIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQ 366 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~----~~~----------------p~~~---~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~ 366 (461)
.+. +|.++... +.+ +..+ ..... +++++|+++|++++|||+|++|+++...
T Consensus 211 -~g~----~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~~H~~~~~i 284 (382)
T 1u0m_A 211 -TGV----RLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDASDLDFYIVHAGGPRI 284 (382)
T ss_dssp -SEE----EEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCEEECSHHHH
T ss_pred -CCc----EEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEECCCCHHH
Confidence 121 33332221 000 0001 12345 8999999999999999999999999998
Q ss_pred HHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCccee-EEEEEE
Q 012522 367 YVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA-AAVFER 437 (461)
Q Consensus 367 ~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~-A~v~~~ 437 (461)
.....+.||+++++++++ --.-.+||+.+++....+.+++.+-+ ++.++..++..+ |.|+.+ +++|+.
T Consensus 285 ~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~~~g~--~~~Gd~vll~~~-G~G~t~~~~vl~~ 354 (382)
T 1u0m_A 285 LDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGG--VEEGARGLLAGF-GPGITAEMSLGCW 354 (382)
T ss_dssp HHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHSCC--CCSSCCCEEEEE-ETTTEEEEEEEEE
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHhcC--CCCCCEEEEEEE-cccceeEEEEEEE
Confidence 888999999999987642 11345899998887766666655422 223344444333 555554 455554
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-24 Score=215.52 Aligned_cols=248 Identities=18% Similarity=0.190 Sum_probs=180.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
+++++.+|+.+|+++||+++|+++++||.|++++++++.. .+..+..++..+|++ ++++++++.+|+|++.||..|+.
T Consensus 70 ~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~-~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~Al~~A~~ 147 (359)
T 3h78_A 70 PEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHH-DPSQACLIQPLLGLR-HIPVLDIRAQASGLLYGLQMARG 147 (359)
T ss_dssp TTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSS-BSCHHHHHHHHHTCC-SCCEEEEECGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCCC-CCcEEEECCHhHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999988766 677899999999996 68999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++++||+|+|.+|..-
T Consensus 148 ~i~sG~~~~vLvvg~e~~S~~~---------------------------------------------------------- 169 (359)
T 3h78_A 148 QILAGLARHVLVVCGEVLSKRM---------------------------------------------------------- 169 (359)
T ss_dssp HHHTTSCSEEEEEEEEECGGGC----------------------------------------------------------
T ss_pred HHHCCCcCEEEEEEEchhcccC----------------------------------------------------------
Confidence 9999999999999999998710
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
+ .++. .+.++..+||||+|+||+..+.
T Consensus 170 ----~------------------------~~d~-----------------------~~~t~~lfGDGAaA~vl~~~~~-- 196 (359)
T 3h78_A 170 ----D------------------------CSDR-----------------------GRNLSILLGDGAGAVVVSAGES-- 196 (359)
T ss_dssp ----C------------------------CSTT-----------------------THHHHTTBCEEEEEEEEECCSC--
T ss_pred ----C------------------------cccc-----------------------cccccceecceeEEEEEEecCC--
Confidence 0 0000 0001122799999999987642
Q ss_pred hcCCCeeEEEEEeeeec-----cC-------C--------C---CCC-C----------cHHHHHHHHHHHcCCCCCCcc
Q 012522 310 QKGLPILGVFRSFSAVG-----VD-------P--------S---VMG-I----------GPAVAIPAAVKSAGLQIDDIN 355 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~~-----~~-------p--------~---~~~-~----------~~~~ai~~aL~~AGl~~~DID 355 (461)
.+..++.......... .+ + . .+. . ....+++++|+++|++++|||
T Consensus 197 -~~~~i~~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did 275 (359)
T 3h78_A 197 -LEDGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAHELTLDDID 275 (359)
T ss_dssp -SSSEEEEEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCS
T ss_pred -CCCceEEEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 0111222222211110 00 0 0 000 0 123578899999999999999
Q ss_pred EEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCccee-EEE
Q 012522 356 LFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA-AAV 434 (461)
Q Consensus 356 ~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~-A~v 434 (461)
+|.+|+++..+.....+.||++++++..+ .--+||...++-...+.+++.++ +. |.++.++.+ |.|+.+ +++
T Consensus 276 ~~v~Hq~n~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sAsi~l~L~~~~~~l-~~--Gd~vll~~f--G~G~t~~~~l 348 (359)
T 3h78_A 276 HVICHQPNLRILDAVQEQLGIPQHKFAVT--VDRLGNMASASTPVTLAMFWPDI-QP--GQRVLVLTY--GSGATWGAAL 348 (359)
T ss_dssp EEEECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHGGGS-CT--TCEEEEEEE--ETTTEEEEEE
T ss_pred EEEECCCCHHHHHHHHHHhCcCHHHhhhh--hhcccchHHHHHHHHHHHHHHhC-CC--CCEEEEEEE--chhhhheeee
Confidence 99999999999999999999999987654 34579988888666665555552 12 444444443 566555 455
Q ss_pred EEEc
Q 012522 435 FERG 438 (461)
Q Consensus 435 ~~~~ 438 (461)
|+-.
T Consensus 349 l~~~ 352 (359)
T 3h78_A 349 YRKP 352 (359)
T ss_dssp EECC
T ss_pred EEeh
Confidence 5543
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7e-25 Score=265.25 Aligned_cols=279 Identities=16% Similarity=0.194 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC--------eEEEEeecCCCCc-----------------------cchHHHHHH-HH
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG--------DIVVGTVLAPGST-----------------------RAMECRMAA-FY 121 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id--------~vi~g~~~~~~~~-----------------------~~~~a~~ia-~~ 121 (461)
..+|+.+++++||+++|+++++|+ +|++|+..+.... ....+..++ ..
T Consensus 2647 ~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~~ 2726 (3089)
T 3zen_D 2647 VALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQSY 2726 (3089)
T ss_dssp HHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHHH
Confidence 467999999999999999999885 6888876432100 011333344 45
Q ss_pred cCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHH-H
Q 012522 122 AGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITS-E 200 (461)
Q Consensus 122 lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a-~ 200 (461)
+|+ ++|+++|+++|+|++.||..|++.|++|++|++|++|+|.++..++. .+..|+..+ .
T Consensus 2727 lGl--~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~-----------------~f~~~~als~~ 2787 (3089)
T 3zen_D 2727 VGG--YGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAII-----------------GFGDMAATADT 2787 (3089)
T ss_dssp TCC--CSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH-----------------HHHHHTCBCCH
T ss_pred cCC--CCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHH-----------------HHHHhhhhhcc
Confidence 699 68999999999999999999999999999999999999998762210 000000000 0
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCC
Q 012522 201 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280 (461)
Q Consensus 201 ~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~ 280 (461)
.++..++ .+++. .++| ||
T Consensus 2788 ~~~~~~~-------------------------------------------------~sp~~------------~crp-Fd 2805 (3089)
T 3zen_D 2788 EMMRAKG-------------------------------------------------ISDSK------------FSRA-ND 2805 (3089)
T ss_dssp HHHHHTT-------------------------------------------------CCTTT------------SCCS-SB
T ss_pred hhhhhcc-------------------------------------------------CCccc------------ccCc-cc
Confidence 0000000 01111 3455 65
Q ss_pred C--CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCC-------------CCcHHHHHHHHHH
Q 012522 281 K--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM-------------GIGPAVAIPAAVK 345 (461)
Q Consensus 281 ~--~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~-------------~~~~~~ai~~aL~ 345 (461)
. +|++ +||||+++||++.+.|.++|.++++.|.+...... ...+ ..+...+++++|+
T Consensus 2806 ~~~dG~v-------~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~D-g~~~~~~aP~~g~~~a~~~~q~~ai~~AL~ 2877 (3089)
T 3zen_D 2806 RRRLGFL-------EAQGGGTILLARGDLALKMGLPVLAVVGYAQSFAD-GVHTSIPAPGLGALGAARGGRESTLARSLA 2877 (3089)
T ss_dssp TTCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECC-CCCCCSSCCCCGGGGGSTTGGGSHHHHHHH
T ss_pred cCCCCEE-------EeccceEEEEeeHHHHHhCCCceEEEEEEEEEecC-CcccCccCCchhHHhHhhhhHHHHHHHHHH
Confidence 4 7888 89999999999999999999999997766665432 1111 1133468999999
Q ss_pred HcCCCCCCccEEEecCCChH----HHH----HHHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CC-
Q 012522 346 SAGLQIDDINLFEINEAFAS----QYV----YCIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GK- 414 (461)
Q Consensus 346 ~AGl~~~DID~~eiheafa~----~~~----~~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~- 414 (461)
++|++++||||+|.|.+++. .+. ...+.+|... .++|+++++.++|||.||+|+.+++.++++|+.+ +|
T Consensus 2878 ~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPp 2957 (3089)
T 3zen_D 2878 QLGVGADDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPP 2957 (3089)
T ss_dssp TTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCC
T ss_pred HcCCCHHHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCchhhhhHHHHHHHHHHHhcCccCC
Confidence 99999999999999988775 222 2456778765 6799999999999999999999999999999976 10
Q ss_pred ------------------------------CCCEEEEEecccCcceeEEEEEEccch
Q 012522 415 ------------------------------DCRFGVISMCIGSGMGAAAVFERGDCV 441 (461)
Q Consensus 415 ------------------------------~~~~gl~~~~~g~G~g~A~v~~~~~~~ 441 (461)
+.+++++++.+-||.+.++||+..+..
T Consensus 2958 t~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~~~ 3014 (3089)
T 3zen_D 2958 NRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPEAF 3014 (3089)
T ss_dssp CTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGGGT
T ss_pred CCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCchh
Confidence 146788888888888999999987644
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.2e-24 Score=215.71 Aligned_cols=246 Identities=15% Similarity=0.113 Sum_probs=176.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
+++++.+|+.+|+++||+++|++|++||.|++++++++.. .+..++.++..+|++.++++++++.+|+|+++||..|++
T Consensus 76 ~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~ 154 (365)
T 3gwa_A 76 PRETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYV-LPTSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKG 154 (365)
T ss_dssp TTCCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCS-BSCHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHH
Confidence 5789999999999999999999999999999999988776 678899999999997679999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++++||+|+|.+|...
T Consensus 155 ~i~~g~~~~vLvvg~e~~s~~~---------------------------------------------------------- 176 (365)
T 3gwa_A 155 LVETGAARCVLLLTADTYSKYL---------------------------------------------------------- 176 (365)
T ss_dssp HHHTTSCSEEEEEEEECGGGGS----------------------------------------------------------
T ss_pred HHHcCCCCEEEEEEEchhhccC----------------------------------------------------------
Confidence 9999999999999999998710
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
+ +++ +..+..+||||+|+||+..+...
T Consensus 177 ----~------------------------~~d-------------------------r~~~~lfGDGAaA~vl~~~~~~~ 203 (365)
T 3gwa_A 177 ----H------------------------PLD-------------------------KSVRTLFGDGASATAVIAEHGEL 203 (365)
T ss_dssp ----C------------------------TTC-------------------------HHHHTTBCCEEEEEEEEEECSSS
T ss_pred ----C------------------------ccc-------------------------ccccccccceeEEEEEEecCCCC
Confidence 0 000 00111279999999998764210
Q ss_pred hcCCCeeEEEEEeeeec-----------cCCC-------------------CC---C--------CcHHHHHHHHHHHcC
Q 012522 310 QKGLPILGVFRSFSAVG-----------VDPS-------------------VM---G--------IGPAVAIPAAVKSAG 348 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~~-----------~~p~-------------------~~---~--------~~~~~ai~~aL~~AG 348 (461)
. .++.......... ..|. .+ + .....+++++|+++|
T Consensus 204 -~--~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~g 280 (365)
T 3gwa_A 204 -E--RIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSLAEVPRAADRLLALAG 280 (365)
T ss_dssp -C--SEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -C--ceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0 1222222211110 0010 00 0 011357889999999
Q ss_pred CCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCc
Q 012522 349 LQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSG 428 (461)
Q Consensus 349 l~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G 428 (461)
++++|||+|.+|+++........+.||++++++..+ .--+||..+++-...+.+++.+ ++++.+...+... .|.|
T Consensus 281 l~~~did~~v~Hq~n~~i~~~~~~~Lgl~~ek~~~~--l~~~GNtssAsipl~L~~~~~~--g~~~~Gd~vll~~-fG~G 355 (365)
T 3gwa_A 281 EPRENIDCFVLHQANRFMLDALRKKMKIPEHKFPVL--MEHCGNTVSSTLPLALETMRAN--GTLARGMRLMLLG-FGVG 355 (365)
T ss_dssp CCGGGCSEEEECCCCHHHHHHHHHHHTCCGGGSCCC--CTTTCBCGGGHHHHHHHHHHHT--TCCCTTCEEEEEE-EETT
T ss_pred CCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHHH--HhcccchHHHHHHHHHHHHHHc--CCCCCCCEEEEEE-Eehh
Confidence 999999999999999999999999999999987644 3457888877744333333322 1122344444443 3666
Q ss_pred ceeEEEE
Q 012522 429 MGAAAVF 435 (461)
Q Consensus 429 ~g~A~v~ 435 (461)
+.++.++
T Consensus 356 ~t~~~~l 362 (365)
T 3gwa_A 356 YSWAGCL 362 (365)
T ss_dssp TEEEEEE
T ss_pred heeEEEE
Confidence 6654443
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-23 Score=211.54 Aligned_cols=262 Identities=17% Similarity=0.147 Sum_probs=180.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
+++++.+|+.+|+++||+++|+++++||.|+++++++++. .+..+..++..+|++.++++++++.+|+|++.||..|++
T Consensus 64 ~~~~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~ 142 (345)
T 3s21_A 64 QDVQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYL-EPSTASIVSGNLGVSDHCMTFDVANACLAFINGMDIAAR 142 (345)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCS-SSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CChHHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999888766 677899999999997678999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++++||+|+|.+|... . .. ..+
T Consensus 143 ~i~~g~~~~vLvvg~e~~s~~~-~-----------------------~~----------------------~~~------ 170 (345)
T 3s21_A 143 MLERGEIDYALVVDGETANLVY-E-----------------------KT----------------------LER------ 170 (345)
T ss_dssp HHHHTSCSEEEEEEEECCHHHH-H-----------------------HH----------------------HHH------
T ss_pred HHHCCCCCEEEEEEEcccchhh-c-----------------------cc----------------------ccc------
Confidence 9999999999999999998610 0 00 000
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCccccCCCCcccccceEEEEcchhH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSL 307 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~lt~~~~~~~~DGAaAvvL~s~~~ 307 (461)
++. |+ .+.+ + |+. .+.+ +||||+|+||.+.+.
T Consensus 171 --~~~-------------------------~~-----~~~~------~-f~~~~~~~~-------~GdGA~A~vl~~~~~ 204 (345)
T 3s21_A 171 --MTS-------------------------PD-----VTEE------E-FRNELAALT-------LGCGAAAMVMARSEL 204 (345)
T ss_dssp --HTC-------------------------TT-----CCHH------H-HHHHHGGGG-------BCCEEEEEEEEEGGG
T ss_pred --ccC-------------------------Cc-----cchh------h-hhhhcccee-------eccceeEEEEecCCC
Confidence 000 00 0000 0 110 1223 899999999998653
Q ss_pred HHhcCCCeeEEEEEeeeeccC---C--C--CC-CC--------cHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHH
Q 012522 308 AVQKGLPILGVFRSFSAVGVD---P--S--VM-GI--------GPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCI 371 (461)
Q Consensus 308 A~~~g~~~~a~i~g~~~~~~~---p--~--~~-~~--------~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~ 371 (461)
.. -+..++...........+ + . .+ +. ....+++++|+++|++++|||+|.+|+++........
T Consensus 205 ~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i~~~~~ 283 (345)
T 3s21_A 205 VP-DAPRYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRPHTAAFV 283 (345)
T ss_dssp ST-TSCEEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHHHHHHHH
T ss_pred CC-CCcceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHH
Confidence 21 011122111111110000 0 0 00 10 1235678999999999999999999999999999999
Q ss_pred HHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEE
Q 012522 372 KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 436 (461)
Q Consensus 372 e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~ 436 (461)
+.||++++++..+ .--+||...++-...+.+++.+- +++.++..+... .|.|+.++.++-
T Consensus 284 ~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g--~~~~Gd~vll~~-~G~G~t~~~~~l 343 (345)
T 3s21_A 284 KSFGIDPAKVMTI--FGEHGNIGPASVPIVLSKLKELG--RLKKGDRIALLG-IGSGLNCSMAEV 343 (345)
T ss_dssp HHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHT--CCCTTCEEEEEE-EETTTEEEEEEE
T ss_pred HHcCcCHHHceee--HhhcCchHHHHHHHHHHHHHHcC--CCCCCCEEEEEE-EChhhhheEEEE
Confidence 9999999886533 24579988888666665555441 122334444433 266666544443
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-24 Score=220.80 Aligned_cols=247 Identities=13% Similarity=0.117 Sum_probs=172.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeC-CCCchHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATA 150 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~CaSgl~Al~~A~~~ 150 (461)
.+..+|+.+|+++||+++|+++++||.|+++++++.. .+..+..++..+|++..+++++++ ++|+|++.||..|+++
T Consensus 93 ~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~ 170 (374)
T 2h84_A 93 KVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGII--IPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASL 170 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCC--SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCC--CCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999987643 467889999999996557999996 8999999999999999
Q ss_pred HHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhC
Q 012522 151 IKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATAS 230 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~a 230 (461)
|++|.++++||+|+|.++.....
T Consensus 171 i~~g~~~~vLv~g~e~~s~~~~~--------------------------------------------------------- 193 (374)
T 2h84_A 171 AKASPRNRILVVCTEVCSLHFSN--------------------------------------------------------- 193 (374)
T ss_dssp HTTCTTCEEEEEEEECCGGGCCC---------------------------------------------------------
T ss_pred HHcCCCCEEEEEEEEecchhhcC---------------------------------------------------------
Confidence 99999999999999998861100
Q ss_pred CCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHh
Q 012522 231 GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 231 g~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
| .+.+.+ + .+++ +||||+|+||++.+.+..
T Consensus 194 ----------------~-------------------~dr~~~------~--~~~l-------fGDGA~A~vL~~~~~~~~ 223 (374)
T 2h84_A 194 ----------------T-------------------DGGDQM------V--ASSI-------FADGSAAYIIGCNPRIEE 223 (374)
T ss_dssp ----------------S-------------------SSHHHH------H--HHHH-------BCCEEEEEEEESSCCTTC
T ss_pred ----------------C-------------------CCHHHH------h--hhhh-------hccCcEEEEEecCCCccc
Confidence 0 000000 0 0123 799999999998765432
Q ss_pred cCCCeeEEEEEeeeecc-----------CCCC----CC--------CcHHHHHHHHHHHcC------CCCCCccEEEecC
Q 012522 311 KGLPILGVFRSFSAVGV-----------DPSV----MG--------IGPAVAIPAAVKSAG------LQIDDINLFEINE 361 (461)
Q Consensus 311 ~g~~~~a~i~g~~~~~~-----------~p~~----~~--------~~~~~ai~~aL~~AG------l~~~DID~~eihe 361 (461)
.+ ++ ++.+.+.... ...- .+ .....+++++|+++| ++++|||+| +|+
T Consensus 224 ~~--~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~ 299 (374)
T 2h84_A 224 TP--LY-EVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHT 299 (374)
T ss_dssp CC--CE-EEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECC
T ss_pred CC--ce-eEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECC
Confidence 22 22 4554433210 0000 00 123568899999999 999999999 999
Q ss_pred CChHHHHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHcc-CCCCCEEEEEecccCcceeEEEEEE
Q 012522 362 AFASQYVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRR-GKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 362 afa~~~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
++........+.||++++++.++ --.-.+||+..++-.. ++.++.++ .++.++.++. .|+|+.++.++-+
T Consensus 300 ~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~----~L~~~~~~~~~Gd~vll~~--~G~G~t~~~~ll~ 371 (374)
T 2h84_A 300 GGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIF----VMDHARKSKSLPTYSISLA--FGPGLAFEGCFLK 371 (374)
T ss_dssp CCHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHH----HHHHHHTCSCCCSEEEEEE--EETTTEEEEEEEE
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHH----HHHHHHhhcCCCCeEEEEE--eccchhhhhhhhe
Confidence 99998888999999999987532 1123466666666444 44444333 1233444443 3666666544433
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.1e-23 Score=206.67 Aligned_cols=247 Identities=20% Similarity=0.222 Sum_probs=176.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHH
Q 012522 69 FKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVA 148 (461)
Q Consensus 69 ~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~ 148 (461)
.++++..+|+.+|+++||+++|++|+|||.||++++++++. .|..+.+++..||++ +.++++++.+|++++.||..|.
T Consensus 57 ~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~-~P~~a~~v~~~LGl~-~~~a~di~~~C~g~~~aL~~A~ 134 (350)
T 4ewp_A 57 TAEETVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHA-TPSAAALVAHEIGAT-PAPAYDVSAACAGYCYGVAQAD 134 (350)
T ss_dssp CSSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCS-SSCHHHHHHHHTTCT-TSCEEEEECGGGHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CCchHHHHHHHhCCC-CceEEEeecchhhHHHHHHHhh
Confidence 35789999999999999999999999999999999999876 688899999999996 5789999999999999999999
Q ss_pred HHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhh
Q 012522 149 TAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAAT 228 (461)
Q Consensus 149 ~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~ 228 (461)
.+|++|..+.+||+++|.+|...
T Consensus 135 ~~i~~g~~~~~Lvv~~E~~s~~~--------------------------------------------------------- 157 (350)
T 4ewp_A 135 ALVRSGTARHVLVVGVERLSDVV--------------------------------------------------------- 157 (350)
T ss_dssp HHHHTTSCSEEEEEEEEEGGGGC---------------------------------------------------------
T ss_pred hhhhCCCccceeEeeeeeceecc---------------------------------------------------------
Confidence 99999999999999999988610
Q ss_pred hCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHH
Q 012522 229 ASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLA 308 (461)
Q Consensus 229 ~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A 308 (461)
+ + .++ ..+..+||||+|+||...+..
T Consensus 158 -----d------------~-------------------------------~~~------~~~~lfgDGA~A~vl~~~~~~ 183 (350)
T 4ewp_A 158 -----D------------P-------------------------------TDR------SISFLLGDGAGAVIVAASDEP 183 (350)
T ss_dssp -----C------------T-------------------------------TCT------TTGGGBCEEEEEEEEEEESSC
T ss_pred -----c------------c-------------------------------ccc------ccccccccchheeeeecccCC
Confidence 0 0 000 001127999999999865421
Q ss_pred HhcCCCeeEEEEEeeeec-----------------------cCCC------------C-C-C--------CcHHHHHHHH
Q 012522 309 VQKGLPILGVFRSFSAVG-----------------------VDPS------------V-M-G--------IGPAVAIPAA 343 (461)
Q Consensus 309 ~~~g~~~~a~i~g~~~~~-----------------------~~p~------------~-~-~--------~~~~~ai~~a 343 (461)
+... ...+..... .+.. . + + .....+++++
T Consensus 184 ---~~~~--~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~ 258 (350)
T 4ewp_A 184 ---GISP--SVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAREA 258 (350)
T ss_dssp ---CBCC--CEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHTHHHHHHHH
T ss_pred ---Cccc--eeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHHHHHHHHhhhHHHHHH
Confidence 1111 111111000 0000 0 0 0 0124688999
Q ss_pred HHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEe
Q 012522 344 VKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISM 423 (461)
Q Consensus 344 L~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~ 423 (461)
|+++|++++|||+|.+|+++..+.....+.||++++++-+. -.--+||...+|=...+.+++.+-+- .+|.++.++.+
T Consensus 259 L~~~gl~~~did~~v~Hq~~~~i~~~~~~~Lgl~~~~~~~~-~l~~~GNtssasi~~~L~~~~~~g~~-~~Gd~vll~~f 336 (350)
T 4ewp_A 259 LDAAGVEPEDLAAFIPHQANMRIIDEFAKQLKLPESVVVAR-DIADAGNTSAASIPLAMHRLLEENPE-LSGGLALQIGF 336 (350)
T ss_dssp HHHHTCCGGGEEEEEECCSCHHHHHHHHHHTTCCTTSEECC-THHHHCBCGGGHHHHHHHHHHHHCGG-GTTSEEEEEEE
T ss_pred HHhhcCChhHhceEEecCCCHHHHHHHHHHcCcChHhEEec-ccccccchHHHHHHHHHHHHHHhCCC-CCcCEEEEEEE
Confidence 99999999999999999999999999999999999885331 12346888877755444444443221 22344444443
Q ss_pred cccCcceeEEEEEE
Q 012522 424 CIGSGMGAAAVFER 437 (461)
Q Consensus 424 ~~g~G~g~A~v~~~ 437 (461)
|.|+.++.++-|
T Consensus 337 --G~G~t~~~~vlr 348 (350)
T 4ewp_A 337 --GAGLVYGAQVVR 348 (350)
T ss_dssp --ETTTEEEEEEEE
T ss_pred --chhhEeEEEEEE
Confidence 667766554444
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-24 Score=220.05 Aligned_cols=252 Identities=18% Similarity=0.194 Sum_probs=175.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe-CCCCchHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NRQCSSGLQAVADVATA 150 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~CaSgl~Al~~A~~~ 150 (461)
.+..+|+.+|+++||+++|+++++||.|+++++++. . .+..+..++..+|++..++.+++ +.+|+|++.||..|+++
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~ 188 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGF-I-APGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNY 188 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCC-C-SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCC-c-cChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998873 3 57788999999999655678888 99999999999999999
Q ss_pred HHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhC
Q 012522 151 IKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATAS 230 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~a 230 (461)
|++|.+|++||+|+|.++... + |+.+|
T Consensus 189 i~~G~~~~vLv~g~e~~s~~~-~--------------------------------~~~~r-------------------- 215 (393)
T 1ted_A 189 VRAHPAMKALVVCIELCSVNA-V--------------------------------FADDI-------------------- 215 (393)
T ss_dssp HHHSTTCEEEEEEEEECGGGC-C--------------------------------CCSSH--------------------
T ss_pred HHcCCCCEEEEEEEEeccccC-C--------------------------------CCCCH--------------------
Confidence 999999999999999988610 0 00000
Q ss_pred CCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHh
Q 012522 231 GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 231 g~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
++.. .+++ +||||+|+||++.+.+..
T Consensus 216 ---------------------------------------~~~~--------~~~l-------fGDGA~A~vL~~~~~~~~ 241 (393)
T 1ted_A 216 ---------------------------------------NDVV--------IHSL-------FGDGCAALVIGASQVQEK 241 (393)
T ss_dssp ---------------------------------------HHHH--------HHHH-------BCEEEEEEEEEEECTTSC
T ss_pred ---------------------------------------HHhh--------hhhh-------hcCccEEEEEecCCCccc
Confidence 0000 0123 799999999987654311
Q ss_pred cCCCeeEEEEEeeeec-cCC-C------------C-CC--------CcHHHHHHHHHHHcCCCCCCccEEEecCCChHHH
Q 012522 311 KGLPILGVFRSFSAVG-VDP-S------------V-MG--------IGPAVAIPAAVKSAGLQIDDINLFEINEAFASQY 367 (461)
Q Consensus 311 ~g~~~~a~i~g~~~~~-~~p-~------------~-~~--------~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~ 367 (461)
.+. .+.++.+++... .+. . . .+ .....+++++|+++|++++|||+|.+|+++..+.
T Consensus 242 ~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i~ 320 (393)
T 1ted_A 242 LEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKII 320 (393)
T ss_dssp CCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHH
T ss_pred cCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHHH
Confidence 122 334566653321 110 0 0 11 1234688999999999999999999999999998
Q ss_pred HHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccC-CCCCEEEEEecccCcceeE-EEEE
Q 012522 368 VYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRG-KDCRFGVISMCIGSGMGAA-AVFE 436 (461)
Q Consensus 368 ~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~-~~~~~gl~~~~~g~G~g~A-~v~~ 436 (461)
....+.||++++++.++ --.--+||+.+++-...+.+++.+- +. +.++..++.. .|+|+.++ ++|+
T Consensus 321 d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~~~g--~~~~~Gd~vll~~-~G~G~t~~~~~l~ 389 (393)
T 1ted_A 321 EQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQA--ESAKAISTGVAFA-FGPGVTVEGMLFD 389 (393)
T ss_dssp HHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSC--SSSSSSEEEEEEE-EETTTEEEEEEEE
T ss_pred HHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHHhcC--ccCCCCCeEEEEE-eccchhhhhhhee
Confidence 88999999999987431 1123478877777554444443321 12 1234444443 35555554 4444
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=207.32 Aligned_cols=242 Identities=14% Similarity=0.118 Sum_probs=169.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHH
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIK 152 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~ 152 (461)
++.+|+.+|+++||+++|+++++||.|+++++++++. .+..+..++..+|+ ++++++++.+|+|+++||..|+++|+
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~-~p~~a~~v~~~LGl--~~~~~dv~~aC~g~~~aL~~A~~~i~ 192 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRA-YPAMAIEVQNALGL--GGFAFDMNVACSSATFGLKTAADFVG 192 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCS-BSCHHHHHHHHTTC--CSEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-ccHHHHHHHHHhCC--CCeEEEECCccHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999988776 67789999999999 47999999999999999999999999
Q ss_pred cCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 012522 153 AGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGK 232 (461)
Q Consensus 153 sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~ 232 (461)
+|.++++||+|+|.+|...
T Consensus 193 ~g~~~~vLvvg~E~~S~~~------------------------------------------------------------- 211 (392)
T 3led_A 193 GGSVDAVLMVNPEICSGHL------------------------------------------------------------- 211 (392)
T ss_dssp TTSCSEEEEEEEEEGGGGC-------------------------------------------------------------
T ss_pred CCCCCEEEEEeehhcCCcC-------------------------------------------------------------
Confidence 9999999999999998710
Q ss_pred CccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcC
Q 012522 233 FKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKG 312 (461)
Q Consensus 233 ~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g 312 (461)
+ . .|+ ..+..+||||+|+||...+... -+
T Consensus 212 -d------------------------~-------------------~dr------~t~~lFGDGA~A~vl~~~~~~~-~~ 240 (392)
T 3led_A 212 -N------------------------F-------------------RDR------DSHFIFGDVATAAIVERADDAQ-GG 240 (392)
T ss_dssp -C------------------------T-------------------TCT------TTTTTBCEEEEEEEEEEGGGCC-SS
T ss_pred -C------------------------c-------------------Ccc------cCCcccccccEEEEEEecCCCC-CC
Confidence 0 0 000 0122389999999998765310 01
Q ss_pred CCeeEEEEEeeee-------c-c---CCCC-------C-CCc----------HHHHHHHHHHHcCCCCCCccEEEecCCC
Q 012522 313 LPILGVFRSFSAV-------G-V---DPSV-------M-GIG----------PAVAIPAAVKSAGLQIDDINLFEINEAF 363 (461)
Q Consensus 313 ~~~~a~i~g~~~~-------~-~---~p~~-------~-~~~----------~~~ai~~aL~~AGl~~~DID~~eiheaf 363 (461)
..++......... + . .+.. + ..+ ...+++++|+++|++++|||+|.+|+++
T Consensus 241 ~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~~dId~~v~Hqan 320 (392)
T 3led_A 241 WSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDPHGLKRMWLHQAN 320 (392)
T ss_dssp EEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECSSC
T ss_pred CeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEcCCC
Confidence 1122111111000 0 0 0000 0 011 2357889999999999999999999999
Q ss_pred hHHHHHHHHHc-CC--CCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCccee-EEEEE
Q 012522 364 ASQYVYCIKKL-GL--DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA-AAVFE 436 (461)
Q Consensus 364 a~~~~~~~e~L-Gl--~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~-A~v~~ 436 (461)
..+.....+.| |+ +.+++..+ .--+||...||-. -++.++.++++.+...++... |+|+.+ +++|+
T Consensus 321 ~~i~~~~~~~llgl~~~~~k~~~~--l~~~GNtssAsip----l~L~~~~~~~~~Gd~vll~gf-G~G~t~~~~ll~ 390 (392)
T 3led_A 321 INMNEIIGRKVLGRDPTRDENVII--LDDYANTSSAGSI----IAFHKHQDDMAQGDLGLICSF-GAGYSAGTVFVQ 390 (392)
T ss_dssp HHHHHHHHHHHHTSCCCTTTBCCC--HHHHCBCGGGHHH----HHHHHCCTTCCTTCEEEEEEE-ETTTEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHH--HhhhCccHHHHHH----HHHHHHhCCCCCCCEEEEEEE-ChhhEeEEEEEE
Confidence 99888888886 64 55665332 3457888777643 334444444434455555443 556665 44444
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=206.70 Aligned_cols=250 Identities=17% Similarity=0.130 Sum_probs=166.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC-eEEeCCCCchHHHHHHHHHHHH
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATAI 151 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~CaSgl~Al~~A~~~I 151 (461)
+..+|+.+|+++||+++|+++++||.|+++++++ .. .+..+..++..||++...+ +++++.+|+++++||..|..+|
T Consensus 95 ~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~-~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i 172 (387)
T 3oit_A 95 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AH-VPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLA 172 (387)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CE-ESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CC-cccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999887 44 6788999999999975443 8999999999999999999999
Q ss_pred HcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCC
Q 012522 152 KAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231 (461)
Q Consensus 152 ~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag 231 (461)
++|.++.+||+|+|.+|..
T Consensus 173 ~sg~~~~vLvvg~E~~s~~------------------------------------------------------------- 191 (387)
T 3oit_A 173 ENSRGARVLVVAAELTLMY------------------------------------------------------------- 191 (387)
T ss_dssp HSSTTCEEEEEEEECGGGT-------------------------------------------------------------
T ss_pred hcCCCCEEEEEEEeccchh-------------------------------------------------------------
Confidence 9999999999999999840
Q ss_pred CCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhc
Q 012522 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQK 311 (461)
Q Consensus 232 ~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~ 311 (461)
|.+ | ++ .+.+++ ..+..+||||+|+||+..+. .
T Consensus 192 -~~~-----------~------------~d-----~~~~~~---------------~~~~lFGDGAaA~vl~~~~~--~- 224 (387)
T 3oit_A 192 -FTG-----------P------------DE-----GCFRTL---------------LVQGLFGDGAAAVIVGADAD--D- 224 (387)
T ss_dssp -CCC-----------C------------CS-----SSCHHH---------------HHHHHBCCEEEEEEEESSCC--S-
T ss_pred -ccC-----------c------------cc-----cchHhh---------------hcccccccceEEEEEecCCC--c-
Confidence 000 0 00 000110 01222799999999987641 1
Q ss_pred CCCeeEEEEEeeeeccC--CC-------C------CCC--------cHHHHHHHHHHHc----CCCCCCcc--EEEecCC
Q 012522 312 GLPILGVFRSFSAVGVD--PS-------V------MGI--------GPAVAIPAAVKSA----GLQIDDIN--LFEINEA 362 (461)
Q Consensus 312 g~~~~a~i~g~~~~~~~--p~-------~------~~~--------~~~~ai~~aL~~A----Gl~~~DID--~~eihea 362 (461)
...+...+.+......+ .. . +.. ....+++++|+++ |++ |+| +|.+|++
T Consensus 225 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~~gl~--d~d~~~~v~Hq~ 302 (387)
T 3oit_A 225 VERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGG--GWNDLFWAVHPG 302 (387)
T ss_dssp SCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC--------GGGSEEEECCC
T ss_pred ccCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhcccCCCC--cccccEEEECCC
Confidence 11222244433221100 00 0 001 1235678888888 987 555 9999999
Q ss_pred ChHHHHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccCCC-----CCEEEEEecccCccee-EEEE
Q 012522 363 FASQYVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRGKD-----CRFGVISMCIGSGMGA-AAVF 435 (461)
Q Consensus 363 fa~~~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~-----~~~gl~~~~~g~G~g~-A~v~ 435 (461)
+..+.....+.|||+++++..+ --.--+||...+|-...+.++..+ +- .+| ...+++.. .|.|+.+ +++|
T Consensus 303 n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~-~~-~~G~~g~~~d~vll~~-fG~G~t~~~~ll 379 (387)
T 3oit_A 303 SSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQ-RK-EAAAAGEWPELGVMMA-FGPGMTVDAMLL 379 (387)
T ss_dssp CHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHC------------CCEEEEEE-EETTTEEEEEEE
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHHHHHh-hh-ccCCCCCCCCEEEEEE-ecccceeeeeee
Confidence 9999999999999999986421 001347888888765555554333 10 112 14555554 3666665 4555
Q ss_pred EE
Q 012522 436 ER 437 (461)
Q Consensus 436 ~~ 437 (461)
++
T Consensus 380 ~~ 381 (387)
T 3oit_A 380 HA 381 (387)
T ss_dssp EE
T ss_pred Ee
Confidence 44
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.9e-22 Score=197.19 Aligned_cols=94 Identities=23% Similarity=0.240 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHc
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKA 153 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~s 153 (461)
+.+|+.+|+++||+++|+++++||.|++++++++.. .+..+..++..+|++. +++++++.+|+|+++||..|+.+|++
T Consensus 52 ~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~-~p~~a~~v~~~lGl~~-~~~~~v~~aC~s~~~al~~A~~~i~~ 129 (321)
T 3il6_A 52 TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFN-MPSVACQVQGAIGATE-AFAFDISAACSGFVYALSMAEKLVLS 129 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHTTCTT-CEEEEECCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcC-CCcHHHHHHHHcCCCC-ceEEEeCcccHHHHHHHHHHHHHHHC
Confidence 899999999999999999999999999999987776 6788999999999964 89999999999999999999999999
Q ss_pred CCCCEEEEEeeccccc
Q 012522 154 GLYDIGIAAGLESMTV 169 (461)
Q Consensus 154 G~~d~vLv~G~E~~s~ 169 (461)
|.++++|++|+|.+|.
T Consensus 130 g~~~~vLvvg~e~~s~ 145 (321)
T 3il6_A 130 GRYQTGLVIGGETFSK 145 (321)
T ss_dssp SSCCCEEEEEEECGGG
T ss_pred CCCCEEEEEEEccccc
Confidence 9999999999999986
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=6.7e-22 Score=229.38 Aligned_cols=278 Identities=19% Similarity=0.217 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHHHHcCCC-cCC----cC----eEEEEeecCCCC-----------------------ccchHHHHHHH-H
Q 012522 75 DDLLAPVLKAVIEKTRLN-PSE----VG----DIVVGTVLAPGS-----------------------TRAMECRMAAF-Y 121 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~-~~~----Id----~vi~g~~~~~~~-----------------------~~~~~a~~ia~-~ 121 (461)
..|+.+++.+||+++|++ |.+ |+ ++++|+..+... -....+.+++. .
T Consensus 1212 ~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~~ 1291 (1887)
T 2uv8_A 1212 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1291 (1887)
T ss_dssp HHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHHH
Confidence 568899999999999994 766 44 566676543310 01224567776 4
Q ss_pred cCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHH
Q 012522 122 AGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSEN 201 (461)
Q Consensus 122 lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 201 (461)
+|+ .+|+++++++|+|++.||..|++.|++|++|++||+|+|.++...+. .+
T Consensus 1292 lgl--~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~~~~~-----------------~f--------- 1343 (1887)
T 2uv8_A 1292 ISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSF-----------------EF--------- 1343 (1887)
T ss_dssp TCC--CSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH-----------------HH---------
T ss_pred cCC--ccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHH-----------------HH---------
Confidence 888 68999999999999999999999999999999999999998652110 00
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC
Q 012522 202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281 (461)
Q Consensus 202 ~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~ 281 (461)
...+..-+..++++ .| .++++ .+|| |+.
T Consensus 1344 --~~m~als~~~~e~~------------~g-------------------------~~p~~------------~~RP-fd~ 1371 (1887)
T 2uv8_A 1344 --GNMKATSNTLEEFE------------HG-------------------------RTPAE------------MSRP-ATT 1371 (1887)
T ss_dssp --HHTTCBCCHHHHHH------------TT-------------------------CCGGG------------SCCT-TBT
T ss_pred --HHhhhhccchhhhc------------cc-------------------------CCCcc------------CcCC-Ccc
Confidence 00010000000000 00 11222 3455 664
Q ss_pred --CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCC------CC-------------------
Q 012522 282 --DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM------GI------------------- 334 (461)
Q Consensus 282 --~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~------~~------------------- 334 (461)
+|++ ++||++++||++.+.|.++|.++++.|.+++.+....... +.
T Consensus 1372 ~r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~ps~~ld 1444 (1887)
T 2uv8_A 1372 TRNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLN 1444 (1887)
T ss_dssp TCCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSCCGGGC
T ss_pred cCCCcc-------cccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCCCcccc
Confidence 7888 8999999999999999999999999999998876422110 00
Q ss_pred ------------------------------------------------------------------------cHHHHHHH
Q 012522 335 ------------------------------------------------------------------------GPAVAIPA 342 (461)
Q Consensus 335 ------------------------------------------------------------------------~~~~ai~~ 342 (461)
+...++++
T Consensus 1445 ~~~r~~ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ 1524 (1887)
T 2uv8_A 1445 MKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRG 1524 (1887)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHH
Confidence 00258999
Q ss_pred HHHHcCCCCCCccEEEecCCChHH----HHH----HHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-
Q 012522 343 AVKSAGLQIDDINLFEINEAFASQ----YVY----CIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSEMKRR- 412 (461)
Q Consensus 343 aL~~AGl~~~DID~~eiheafa~~----~~~----~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~- 412 (461)
+|+++||+++|||++|.|..++.. +.. ....++-.. .++.++.-+..+|||.||+|+.+++.++.+|+.+
T Consensus 1525 ALa~AGl~p~DId~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~ 1604 (1887)
T 2uv8_A 1525 ALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGI 1604 (1887)
T ss_dssp HHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCE
T ss_pred HHHHcCCCHHHceEEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHhCC
Confidence 999999999999999999998832 111 112334432 2344444455679999999999999999999976
Q ss_pred -------------C---------------CCCCEEEEEecccCcceeEEEEEEcc
Q 012522 413 -------------G---------------KDCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 413 -------------~---------------~~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
+ .+.+++++++++-||.+..+|++..+
T Consensus 1605 iPpt~n~d~~dp~l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~ 1659 (1887)
T 2uv8_A 1605 IPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1659 (1887)
T ss_dssp ECCCTTCSSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTH
T ss_pred cCCcCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCccEEEEEecCC
Confidence 0 13467888887777788888888654
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-22 Score=199.33 Aligned_cols=250 Identities=17% Similarity=0.239 Sum_probs=171.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHH
Q 012522 71 DTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATA 150 (461)
Q Consensus 71 ~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~ 150 (461)
+....+|+.+|+++||+++|++++|||.|++|+.++. . . .+..++..+|+ |+++++.+|+|+++||..|+.+
T Consensus 52 e~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q-~--~-~A~~va~~Lgi----pafdV~~ACsg~~~AL~~Aa~~ 123 (347)
T 3lma_A 52 EMAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQ-N--V-TANYVARHLKI----PFLCLFGACSTSMESIAISSAL 123 (347)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSS-S--T-THHHHHHHHCC----CEEEBCCSTTHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCc-h--h-HHHHHHHHhCC----CEEEecChhHHHHHHHHHHHHH
Confidence 3356789999999999999999999999999998873 2 2 56777888865 6999999999999999999999
Q ss_pred HHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhC
Q 012522 151 IKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATAS 230 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~a 230 (461)
|++|.+++|||+|+|.+|+.+..
T Consensus 124 I~sG~~~~VLVVGaE~~S~aerq--------------------------------------------------------- 146 (347)
T 3lma_A 124 IDGGFAKRALAATSSHNATAERQ--------------------------------------------------------- 146 (347)
T ss_dssp HHTTSCSEEEEEEEECGGGTTCC---------------------------------------------------------
T ss_pred HhcCCCCEEEEEEeccccchhhh---------------------------------------------------------
Confidence 99999999999999999973210
Q ss_pred CCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHh
Q 012522 231 GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 231 g~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
|+ .|. ++...+|.+.. + .+|||+|+||.....
T Consensus 147 --~r---~p~------------------------------e~g~q~p~ta~---~-------t~dGAGA~VL~~~g~--- 178 (347)
T 3lma_A 147 --FR---YPT------------------------------EYGGQKPGTAT---S-------TVTGSGAVVLSQQPG--- 178 (347)
T ss_dssp --C-----------------------------------------------------------CCCEEEEEEEESSCC---
T ss_pred --cc---Ccc------------------------------hhcccCCchhc---E-------EccceeEEEEEecCC---
Confidence 00 000 01111222211 2 479999999996531
Q ss_pred cCCCeeEEEEEeeee------ccCCCCCCCcH----HHHHHHHHHHcCCCCCCccEEE---ecCCChHHHHHHHHHcCCC
Q 012522 311 KGLPILGVFRSFSAV------GVDPSVMGIGP----AVAIPAAVKSAGLQIDDINLFE---INEAFASQYVYCIKKLGLD 377 (461)
Q Consensus 311 ~g~~~~a~i~g~~~~------~~~p~~~~~~~----~~ai~~aL~~AGl~~~DID~~e---iheafa~~~~~~~e~LGl~ 377 (461)
.| +|.+.... ..+|..|+.++ ...+.+.|+++|++++|+|+|. +|+....+....++++|++
T Consensus 179 ---~p--~I~~~t~Gkvvd~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtgdL~q~g~~il~~l~~~~g~~ 253 (347)
T 3lma_A 179 ---GI--KITSATVGRVIDLGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTGDLSGVGSPILKDLLKEEGIN 253 (347)
T ss_dssp ---SE--EEEEEECCCCBCCSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEESCHHHHHHHHHHHHHHTTCC
T ss_pred ---CC--ceeeeeeeeeeccCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecCChHHHHHHHHHHHHHHcCCC
Confidence 22 23322211 13555555433 3567899999999999999999 7788887788889999999
Q ss_pred CCCcCCCCCcccccCc-h--------hhHHHHHHHHHHHHHHccCCCCCEEEEEeccc-------------CcceeEEEE
Q 012522 378 PEKVNVNGGAVALGHP-L--------GATGARCVATLLSEMKRRGKDCRFGVISMCIG-------------SGMGAAAVF 435 (461)
Q Consensus 378 ~~~vn~~GG~~~~Ghp-~--------gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g-------------~G~g~A~v~ 435 (461)
.+++...=|..-|+.. . ||+.......++.+|++. ..++.|+...+. -++.-|+++
T Consensus 254 ~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v~~~~~~~~~~~g--~~~ril~~~tGalls~~~~~q~~sip~iah~v~~ 331 (347)
T 3lma_A 254 VGTKHNDCGLMIYTPDQQVFAGGSGCACSAVVTFAHIFKEIEAG--RLNRVLVVATGALLSPTIIQQKESIPCIAHGVVF 331 (347)
T ss_dssp CGGGEEEGGGTSSCC---------CCCCHHHHHHHTHHHHHHTT--SCSEEEEEEEEECCCHHHHHTTCCCCEEEEEEEE
T ss_pred hhHCccccceEEecCCCcccCCCCccccHHHHHHHHHHHHHhcC--cccEEEEEecccccCcchhccCCccChhhEEEEE
Confidence 8665443233334432 2 677777777888899855 445444443322 133468889
Q ss_pred EEccc
Q 012522 436 ERGDC 440 (461)
Q Consensus 436 ~~~~~ 440 (461)
|+.++
T Consensus 332 e~~~~ 336 (347)
T 3lma_A 332 ERAER 336 (347)
T ss_dssp EEC--
T ss_pred Eeecc
Confidence 88763
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=199.86 Aligned_cols=255 Identities=16% Similarity=0.138 Sum_probs=175.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC-eEEeCCCCchHHHHHHHHHHHH
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATAI 151 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~CaSgl~Al~~A~~~I 151 (461)
+..+|+.+|+++||+++|+++++||.|+++++++ .. .+..+..++..||++...+ +++++.+|+++++||..|+.+|
T Consensus 101 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~~-~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i 178 (393)
T 3ov2_A 101 EIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-ID-MPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLA 178 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CC-BSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CC-CCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999988 44 6889999999999975443 8999999999999999999999
Q ss_pred HcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCC
Q 012522 152 KAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231 (461)
Q Consensus 152 ~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag 231 (461)
++|.+++|||+|+|.+|..
T Consensus 179 ~sg~~~~vLvvg~E~~s~~------------------------------------------------------------- 197 (393)
T 3ov2_A 179 ENNRGARVLVVACEITVLS------------------------------------------------------------- 197 (393)
T ss_dssp HHSTTCEEEEEEEECGGGT-------------------------------------------------------------
T ss_pred HcCCCCEEEEEEEeccchh-------------------------------------------------------------
Confidence 9999999999999999740
Q ss_pred CCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhc
Q 012522 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQK 311 (461)
Q Consensus 232 ~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~ 311 (461)
|. ++++ .+.+++ ..+..+||||+|+||+..+... .
T Consensus 198 -~~-----------------------~~~d-----~~~~~~---------------~~~~lFGDGAaA~vl~~~~~~~-~ 232 (393)
T 3ov2_A 198 -FR-----------------------GPNE-----GDFEAL---------------AGQAGFGDGAGAVVVGADPLEG-I 232 (393)
T ss_dssp -CC-----------------------CCCT-----TCHHHH---------------HHHHHBCCEEEEEEEESSCCTT-T
T ss_pred -cc-----------------------CCcc-----cchhhh---------------cccccccCccEEEEEEecCCCc-c
Confidence 00 0000 001111 0112279999999998764321 1
Q ss_pred CCCeeEEEEEeeeeccCC--C-------------CCCC--------cHHHHHHHHHHHcCCCC-CCccEEEecCCChHHH
Q 012522 312 GLPILGVFRSFSAVGVDP--S-------------VMGI--------GPAVAIPAAVKSAGLQI-DDINLFEINEAFASQY 367 (461)
Q Consensus 312 g~~~~a~i~g~~~~~~~p--~-------------~~~~--------~~~~ai~~aL~~AGl~~-~DID~~eiheafa~~~ 367 (461)
..+.-.+...+....+. . .+.. ....+++++|+++|+++ +|| +|.+|+++..+.
T Consensus 233 -~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~v~Hq~n~~i~ 310 (393)
T 3ov2_A 233 -EKPIYEIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDV-FWVAHPGNWAII 310 (393)
T ss_dssp -CCCSEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGGS-EEEECCCCHHHH
T ss_pred -cCceeEEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccCc-EEEECCCChHHH
Confidence 11211333222111000 0 0011 12368899999999997 888 899999999999
Q ss_pred HHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHH-H-ccCCCC---CEEEEEecccCccee-EEEEEEc
Q 012522 368 VYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEM-K-RRGKDC---RFGVISMCIGSGMGA-AAVFERG 438 (461)
Q Consensus 368 ~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L-~-~~~~~~---~~gl~~~~~g~G~g~-A~v~~~~ 438 (461)
....+.||++++++..+ --.--+||...+|-...+.+++.+. + ++++.+ ..+++.. .|.|+.+ +++|++.
T Consensus 311 ~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G~~~d~vll~~-fG~G~t~~~~ll~~~ 387 (393)
T 3ov2_A 311 DAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQWGVLLG-FGPGLSIETVVLRSM 387 (393)
T ss_dssp HHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEE-EETTTEEEEEEEEEC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCCCCCCeEEEEE-ECccceeeeeeeEEc
Confidence 99999999999986321 0013478988888666666665541 1 222222 5555554 3666665 5555554
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-21 Score=225.30 Aligned_cols=278 Identities=19% Similarity=0.223 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHHHHcCCC-cCC----cC----eEEEEeecCCCC--------------------c---cchHHHHHHH-H
Q 012522 75 DDLLAPVLKAVIEKTRLN-PSE----VG----DIVVGTVLAPGS--------------------T---RAMECRMAAF-Y 121 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~-~~~----Id----~vi~g~~~~~~~--------------------~---~~~~a~~ia~-~ 121 (461)
..|+.+++.+||+++|++ |.+ |+ ++++|+..++.. + ....+.+++. .
T Consensus 1187 ~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~ 1266 (1878)
T 2uv9_A 1187 TLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLL 1266 (1878)
T ss_dssp HHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHh
Confidence 468889999999999998 766 34 677777654310 0 1124567777 4
Q ss_pred cCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHH
Q 012522 122 AGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSEN 201 (461)
Q Consensus 122 lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 201 (461)
+|+ .+|+++++++|+|++.||..|++.|++|++|++||+|+|.++...+ +++
T Consensus 1267 lg~--~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~----------------------~~f---- 1318 (1878)
T 2uv9_A 1267 LSS--TGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGS----------------------YEF---- 1318 (1878)
T ss_dssp CCC--CCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHH----------------------HHH----
T ss_pred cCC--CCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHH----------------------HHH----
Confidence 888 6899999999999999999999999999999999999999775211 000
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC
Q 012522 202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281 (461)
Q Consensus 202 ~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~ 281 (461)
...+..-+..++++ .| .++++ .+|| |+.
T Consensus 1319 --~~m~als~~~de~a------------~g-------------------------~~p~~------------~~RP-fd~ 1346 (1878)
T 2uv9_A 1319 --ANMGATSNAKEEFA------------RG-------------------------REPGE------------MSRP-TST 1346 (1878)
T ss_dssp --HHHTCBCCHHHHHT------------TT-------------------------CCTTS------------SCCS-SBT
T ss_pred --HHhhhhccchhhhh------------cC-------------------------CCccc------------CcCC-Ccc
Confidence 00010000001111 00 12233 3455 654
Q ss_pred --CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCCCC----CCcH-------------------
Q 012522 282 --DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM----GIGP------------------- 336 (461)
Q Consensus 282 --~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~----~~~~------------------- 336 (461)
+|++ .+||++++||++.+.|.++|.++++.|.+++.+....... +.+.
T Consensus 1347 ~r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~~~~~~ 1419 (1878)
T 2uv9_A 1347 TRNGFM-------ESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSPLLDIK 1419 (1878)
T ss_dssp TCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCCCSSCCGGGSHH
T ss_pred CCCCCc-------ccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhccccCCCcccchH
Confidence 7888 8999999999999999999999999999998875321100 1110
Q ss_pred --------------------------------------------------------------------------------
Q 012522 337 -------------------------------------------------------------------------------- 336 (461)
Q Consensus 337 -------------------------------------------------------------------------------- 336 (461)
T Consensus 1420 ~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~ 1499 (1878)
T 2uv9_A 1420 YRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSR 1499 (1878)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTT
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChH
Confidence
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCChHH----HHH----HHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAFASQ----YVY----CIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLS 407 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheafa~~----~~~----~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~ 407 (461)
..+++++|+++||+++|||++|.|..++.. +.. ....++-.. .++..+.-+..+|||.||+|+.+++.++.
T Consensus 1500 ~~~ir~ALa~aGl~~~DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~ 1579 (1878)
T 2uv9_A 1500 IAPLRGALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQ 1579 (1878)
T ss_dssp SCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHH
Confidence 168999999999999999999999998832 111 112333332 23333333445799999999999999999
Q ss_pred HHHcc--------------C---------------CCCCEEEEEecccCcceeEEEEEEcc
Q 012522 408 EMKRR--------------G---------------KDCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 408 ~L~~~--------------~---------------~~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
+|+.+ + .+.+++++++++-||.+..+|++..+
T Consensus 1580 ~L~~g~iPp~~n~d~~dp~i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~ 1640 (1878)
T 2uv9_A 1580 VLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHPK 1640 (1878)
T ss_dssp HHTTCEECCCTTCCSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTH
T ss_pred HHhcCCCCCCCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCeeEEEEEecCC
Confidence 99975 0 13467888887777788888888664
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-21 Score=218.76 Aligned_cols=256 Identities=12% Similarity=0.053 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC-CCeEEeCCCCchHHHHHHHHHHHHH
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET-VPLRTVNRQCSSGLQAVADVATAIK 152 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~-~~~~~v~~~CaSgl~Al~~A~~~I~ 152 (461)
..+|+.+|+++||+++|+++++||.|+++++.+. . .+..+..++..+|++.. .++++++.+|+|++.||..|.++|+
T Consensus 689 ~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~ 766 (979)
T 3tsy_A 689 VPKLGKEAALKALKEWGQPKSKITHLVFCTTSGV-E-MPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAE 766 (979)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCC-C-SSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCCC-C-CCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHH
Confidence 5569999999999999999999999999986543 3 57889999999999532 4579999999999999999999999
Q ss_pred cCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 012522 153 AGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGK 232 (461)
Q Consensus 153 sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~ 232 (461)
+|.++++||+|+|.++....
T Consensus 767 sG~~~~vLvvg~e~~~~~~~------------------------------------------------------------ 786 (979)
T 3tsy_A 767 NNAGARVLVVCSEITVVTFR------------------------------------------------------------ 786 (979)
T ss_dssp TSTTCEEEEEEEECTTTTCC------------------------------------------------------------
T ss_pred hCCCCEEEEEEEEecchhee------------------------------------------------------------
Confidence 99999999999998765110
Q ss_pred CccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcC
Q 012522 233 FKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKG 312 (461)
Q Consensus 233 ~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g 312 (461)
. +...+++.+. +++.+||||+|+||++.+.+...+
T Consensus 787 --~----------------------------~~~~~~~~~~---------------~~~lfGDGA~A~vL~~~~~~~~~~ 821 (979)
T 3tsy_A 787 --G----------------------------PSEDALDSLV---------------GQALFGDGSAAVIVGSDPDISIER 821 (979)
T ss_dssp --C----------------------------CCSSCHHHHH---------------HHHHBCCEEEEEEEESSCCSSSCC
T ss_pred --C----------------------------CCccCHHHHh---------------hhhhccCceEEEEEecCCCccccC
Confidence 0 0001111111 122379999999999876554344
Q ss_pred CCeeEEEEEeeeeccCCC-----CCCC----------------cHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHH
Q 012522 313 LPILGVFRSFSAVGVDPS-----VMGI----------------GPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCI 371 (461)
Q Consensus 313 ~~~~a~i~g~~~~~~~p~-----~~~~----------------~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~ 371 (461)
........+......... .... ....+++++|+++|++++|||+|.+|+++........
T Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i~~~~~ 901 (979)
T 3tsy_A 822 PLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDAVE 901 (979)
T ss_dssp CCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHH
T ss_pred cceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCCcccceEEECCCChHHHHHHH
Confidence 444333333332211100 0000 1457899999999999999999999999999999999
Q ss_pred HHcCCCCCCcCCCCC-cccccCchhhHHHHHHHHHHHHHHcc--C-C--CCCEEEEEecccCcceeEEEEEE
Q 012522 372 KKLGLDPEKVNVNGG-AVALGHPLGATGARCVATLLSEMKRR--G-K--DCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 372 e~LGl~~~~vn~~GG-~~~~Ghp~gatG~~~~~~~~~~L~~~--~-~--~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.||++++++..+-- .--+||...||-...+.+++.+++.. + + +..++++.. .|+|+.++.++-+
T Consensus 902 ~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~G~~v~~g~~~~~~ll~~-~G~G~t~~~~~l~ 972 (979)
T 3tsy_A 902 AKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFG-FGPGLTIETVVLH 972 (979)
T ss_dssp HHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEE-ECGGGEEEEEEEE
T ss_pred HHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhcccccccCCCCcceeEEEE-eCCchHHHHHHHH
Confidence 999999998754200 13479999888877777777766543 1 0 112345544 3666665444443
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.87 E-value=9.4e-23 Score=229.38 Aligned_cols=276 Identities=19% Similarity=0.222 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHHcCCC-cCC----cC----eEEEEeecCCCCc-----------------------cchHHHHHHH-H
Q 012522 75 DDLLAPVLKAVIEKTRLN-PSE----VG----DIVVGTVLAPGST-----------------------RAMECRMAAF-Y 121 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~-~~~----Id----~vi~g~~~~~~~~-----------------------~~~~a~~ia~-~ 121 (461)
..|+.+++++||+++|++ |.+ |+ ++++|+..++... ....+.+++. .
T Consensus 1013 qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~~ 1092 (1688)
T 2pff_A 1013 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1092 (1688)
T ss_dssp TTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHHH
Confidence 569999999999999998 665 33 5666655444210 1124556776 6
Q ss_pred cCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHH
Q 012522 122 AGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSEN 201 (461)
Q Consensus 122 lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 201 (461)
+|+ .+|+++++++|+|++.||..|++.|++|++|++||+|+|.++..++. .+..|+.+
T Consensus 1093 LGl--~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~-----------------~Fa~mgaL--- 1150 (1688)
T 2pff_A 1093 ISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSF-----------------EFGNMKAT--- 1150 (1688)
T ss_dssp CCC--CCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTT-----------------TTTTTSCS---
T ss_pred cCC--cCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHH-----------------HHHhcccc---
Confidence 888 68999999999999999999999999999999999999998763321 00000000
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC
Q 012522 202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281 (461)
Q Consensus 202 ~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~ 281 (461)
.. ...+-.. -.++++ .+|| |+.
T Consensus 1151 --------------------------------S~-------~~~e~a~------G~~Pd~------------~cRP-Fd~ 1172 (1688)
T 2pff_A 1151 --------------------------------SN-------TLEEFEH------GRTPAE------------MSRP-ATT 1172 (1688)
T ss_dssp --------------------------------CC-------TTTTTTS------SCCSSS------------SCCS-SSS
T ss_pred --------------------------------cc-------Chhhhhc------CCChhh------------ccCc-Ccc
Confidence 00 0000000 011222 3455 654
Q ss_pred --CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC-----C-CCC-------------------
Q 012522 282 --DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS-----V-MGI------------------- 334 (461)
Q Consensus 282 --~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-----~-~~~------------------- 334 (461)
+|++ ++|||+++||++.+.|.++|.++++.|.+++.+..... . .+.
T Consensus 1173 ~rdGfv-------~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~taPSp~ld 1245 (1688)
T 2pff_A 1173 TRNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLN 1245 (1688)
T ss_dssp SCCCCC-------CCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSCSSCCSC
T ss_pred CCCCCc-------cccceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcccccCCCCcccC
Confidence 6777 89999999999999999999999999999887653211 0 010
Q ss_pred ------------------------------------------------------------------------cHHHHHHH
Q 012522 335 ------------------------------------------------------------------------GPAVAIPA 342 (461)
Q Consensus 335 ------------------------------------------------------------------------~~~~ai~~ 342 (461)
+...++++
T Consensus 1246 ~~~R~rql~~~~~~i~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ 1325 (1688)
T 2pff_A 1246 MKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRG 1325 (1688)
T ss_dssp TTCCHHHHSHHHHHHHHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHH
Confidence 00357899
Q ss_pred HHHHcCCCCCCccEEEecCCChH----------HHHHHHHHcCCCC-CCcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 343 AVKSAGLQIDDINLFEINEAFAS----------QYVYCIKKLGLDP-EKVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 343 aL~~AGl~~~DID~~eiheafa~----------~~~~~~e~LGl~~-~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
+|+++||+++|||++|.|..++. ...+ ..++-.. .++....-+..+|||.||+|+.+++.++.+|+.
T Consensus 1326 ALa~AGLtpdDIdyVEaHGTGT~lgD~iE~~AL~~af--~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~ 1403 (1688)
T 2pff_A 1326 ALATYGLTIDDLGVASFHGTSTKANDKNESATINEMM--KHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNS 1403 (1688)
T ss_dssp HTTSSCSSTTCCCCCCCCCCSCSSSSTTTTTTTGGGT--GGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTT
T ss_pred HHHHcCCCHHHeeEEEEeCCCCccccHHHHHHHHHHH--hhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHc
Confidence 99999999999999998877772 2221 1223321 233333334457999999999999999999997
Q ss_pred c-C----------------------------CCCCEEEEEecccCcceeEEEEEEcc
Q 012522 412 R-G----------------------------KDCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 412 ~-~----------------------------~~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
+ + ++.+++++++.+-||.+..+|++..+
T Consensus 1404 G~IPptln~d~pdp~l~~~d~v~~p~~~~~~~~~r~AlVnSFGFGGtNAhvILe~p~ 1460 (1688)
T 2pff_A 1404 GIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1460 (1688)
T ss_dssp CCCCCCSCCSCCCTTCCSSCCCCSCTTCCSSSSSSCCCCCCCCSTTCCCCCCEECSS
T ss_pred CCCCCCCCCCCCCCCCCcCCceeecCccccCCCCcEEEEeeECCCCeeEEEEEeCCC
Confidence 6 1 13456777777667778888888764
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.87 E-value=9e-21 Score=193.44 Aligned_cols=254 Identities=13% Similarity=0.082 Sum_probs=178.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC-eEEeCCCCchHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATA 150 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~CaSgl~Al~~A~~~ 150 (461)
.+..+|+.+|+++||+++|+++++||.|+++++++. . .+..+..++..+|++...+ +++++.+|+|++.||..|+++
T Consensus 96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~ 173 (387)
T 3a5r_A 96 KGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGV-D-MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDI 173 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCC-E-ESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC-C-CCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998763 3 5778999999999965453 899999999999999999999
Q ss_pred HHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhC
Q 012522 151 IKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATAS 230 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~a 230 (461)
|++|.+++|||+|+|.+|..
T Consensus 174 i~~g~~~~vLvvg~e~~s~~------------------------------------------------------------ 193 (387)
T 3a5r_A 174 AENNKGARVLIVCSEMTTTC------------------------------------------------------------ 193 (387)
T ss_dssp HHHSTTCEEEEEEEECCTTT------------------------------------------------------------
T ss_pred HHhCCCCEEEEEEEeccchh------------------------------------------------------------
Confidence 99999999999999998861
Q ss_pred CCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHh
Q 012522 231 GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 231 g~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
|.+ | ++.- ++ ...++..+||||+|+||.+.+..
T Consensus 194 --~~~-----------~------------~d~~---------------~~-----~~~~~~lfGDGA~A~vl~~~~~~-- 226 (387)
T 3a5r_A 194 --FRG-----------P------------SETH---------------LD-----SMIGQAILGDGAAAVIVGADPDL-- 226 (387)
T ss_dssp --CCC-----------C------------CSSC---------------CS-----STTHHHHBCCEEEEEEEESSCCT--
T ss_pred --hcC-----------C------------Cccc---------------hh-----hccccceeccceeEEEEecCCCc--
Confidence 000 0 0000 00 00011228999999999875431
Q ss_pred cC-CCeeEEEEEeeeeccCCC----------------CCCC--------cHHHHHHHHHHHcCCC-CCCccEEEecCCCh
Q 012522 311 KG-LPILGVFRSFSAVGVDPS----------------VMGI--------GPAVAIPAAVKSAGLQ-IDDINLFEINEAFA 364 (461)
Q Consensus 311 ~g-~~~~a~i~g~~~~~~~p~----------------~~~~--------~~~~ai~~aL~~AGl~-~~DID~~eiheafa 364 (461)
+ ..+..++.+.+.... |. .++. ....+++++|+++|++ .+|| +|.+|+++.
T Consensus 227 -~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~ 303 (387)
T 3a5r_A 227 -TVERPIFELVSTAQTIV-PESHGAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGP 303 (387)
T ss_dssp -TTCCCCEEEEEEEEEEC-TTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCH
T ss_pred -cccCCceEEEeeeEEEe-CCChHhcCceEcCCCeEEEecchHHHHHHHHHHHHHHHHHHhcCCCChhhe-eEEECCCCH
Confidence 1 111123333322110 10 0111 1235788999999998 8899 899999999
Q ss_pred HHHHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccCCC-------CCEEEEEecccCccee-EEEE
Q 012522 365 SQYVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRGKD-------CRFGVISMCIGSGMGA-AAVF 435 (461)
Q Consensus 365 ~~~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~-------~~~gl~~~~~g~G~g~-A~v~ 435 (461)
.......+.||++++++..+ --.--+||..+++-...+.+++.+-++. | ....++... |.|+.+ +++|
T Consensus 304 ~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~--G~~~~G~~~d~vll~~f-G~G~t~~~~ll 380 (387)
T 3a5r_A 304 AILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLEN--GQATTGEGLEWGVLFGF-GPGITVETVVL 380 (387)
T ss_dssp HHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHT--TCSBTTTTCSEEEEEEE-ETTTEEEEEEE
T ss_pred HHHHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHHHHhcccc--CCCCCCCCcceEEEEEe-cCcceeeehhh
Confidence 88888899999999886431 0023589999999888888877765422 3 145555443 555554 5566
Q ss_pred EEccc
Q 012522 436 ERGDC 440 (461)
Q Consensus 436 ~~~~~ 440 (461)
+..+.
T Consensus 381 ~~~~~ 385 (387)
T 3a5r_A 381 RSVPV 385 (387)
T ss_dssp EECBC
T ss_pred eeccc
Confidence 55443
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.7e-20 Score=187.72 Aligned_cols=257 Identities=12% Similarity=0.067 Sum_probs=177.1
Q ss_pred eeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe-CC
Q 012522 57 YRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NR 135 (461)
Q Consensus 57 ~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~ 135 (461)
.+|+|.+ +...+. .+..+|+.+|+++||+++|+++++||.|+++++++. . .+..+..++..+|++..++.+++ +.
T Consensus 122 ~rtgi~~-R~~~~~-~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~-~-~P~~a~~v~~~LGl~~~~~~~~v~~~ 197 (413)
T 3v7i_A 122 ASQTVQE-RTAPAW-EAVQAYGERAARGALQIAGLDVADVDCLITSNSTTP-A-LPGLDVALANRLPLRGDTMLLPATQW 197 (413)
T ss_dssp CCCCHHH-HHHHHH-HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSC-C-SSCHHHHHHHHTTCCTTCEEEEESSC
T ss_pred cCCCHHH-hCcccc-cCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCC-C-cCHHHHHHHHHhCCCCCceEEEeeCC
Confidence 4666655 222222 367899999999999999999999999999999874 3 57889999999999766788999 99
Q ss_pred CCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHH
Q 012522 136 QCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDL 215 (461)
Q Consensus 136 ~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~ 215 (461)
+|+++++||..|+.+|++|.+++|||+|+|.+|..
T Consensus 198 ~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~--------------------------------------------- 232 (413)
T 3v7i_A 198 ACVAGTRSLALAADLVAADPDRVVLVVISEALSTT--------------------------------------------- 232 (413)
T ss_dssp GGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGG---------------------------------------------
T ss_pred ccHHHHHHHHHHHHHHhcCCCCEEEEEEEeccccc---------------------------------------------
Confidence 99999999999999999999999999999999871
Q ss_pred HHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccc
Q 012522 216 AAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSD 295 (461)
Q Consensus 216 ~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~D 295 (461)
|+ ++| .+.+.+. .+..+||
T Consensus 233 -----------------~~------------------------~~d-----~~~~~lv---------------~~~LFGD 251 (413)
T 3v7i_A 233 -----------------YQ------------------------PAD-----DTLESLI---------------VRLLFAD 251 (413)
T ss_dssp -----------------CC------------------------SSC-----CSTTHHH---------------HHHHBCC
T ss_pred -----------------cC------------------------ccc-----cchhhhh---------------cceeecc
Confidence 10 000 0001110 1122799
Q ss_pred cceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC----------------CC-CC------cHHHHHHHHHH------H
Q 012522 296 GAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS----------------VM-GI------GPAVAIPAAVK------S 346 (461)
Q Consensus 296 GAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~----------------~~-~~------~~~~ai~~aL~------~ 346 (461)
||+|+||...+.. .+.-.+.+..... .|. .+ +. ....+++++|+ +
T Consensus 252 GAaAvvl~~~~~~-----~~~~~l~~~~~~~-~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~~~L~~~~~~~~ 325 (413)
T 3v7i_A 252 TAVAAVVTGRPRP-----ESVLRLDAAWHHT-LPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMWEWLRVRYEDDP 325 (413)
T ss_dssp EEEEEEEESSCCT-----TEEEEEEEEEEEE-CTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred ccEEEEEEecCCC-----CCCEEEEccccEE-eCCCccccCccccCCceEEEECcHHHHHHHHHHHHHHHHHhhcccccc
Confidence 9999999876421 1111333322111 010 00 00 12367889999 8
Q ss_pred cCCCCCCccEEEecCCChHHHHHHHHHcC--CCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEe
Q 012522 347 AGLQIDDINLFEINEAFASQYVYCIKKLG--LDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISM 423 (461)
Q Consensus 347 AGl~~~DID~~eiheafa~~~~~~~e~LG--l~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~ 423 (461)
+|++ ||+|.+|+.+..+.....+.|| |+++++..+ --.- +||...+|-...+.+++ +++++.+..++...
T Consensus 326 ~gl~---id~~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~l~-~GNtssAsi~~~L~~~~---~~~~~~Gd~vll~~ 398 (413)
T 3v7i_A 326 SSWH---PDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSYT-SGNRGGAAVFDILRRAH---DAGQKTGSRAVLYA 398 (413)
T ss_dssp TTCC---CCEEEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHHHT-TCBCGGGHHHHHHHHHH---HHCCCTTCEEEEEE
T ss_pred CCCc---eeEEEECCCChHHHHHHHHHhCCCCCHHHhhccceEec-eeChHHHHHHHHHHHHH---hCCCCCCCEEEEEE
Confidence 9988 9999999999999999999999 999987210 0023 78877777554444443 23333445555544
Q ss_pred cccCcceeEEEEEE
Q 012522 424 CIGSGMGAAAVFER 437 (461)
Q Consensus 424 ~~g~G~g~A~v~~~ 437 (461)
.|.|+.+..++-+
T Consensus 399 -fG~Glt~~~~ll~ 411 (413)
T 3v7i_A 399 -AAPGLTATALEGE 411 (413)
T ss_dssp -EETTTEEEEEEEE
T ss_pred -ECHHHhHhhhheE
Confidence 3666666554443
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-20 Score=192.42 Aligned_cols=250 Identities=14% Similarity=0.119 Sum_probs=176.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC-eEEeCCCCchHHHHHHHHHHHH
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATAI 151 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~CaSgl~Al~~A~~~I 151 (461)
+..+|+.+|+++||+++|+++++||.|+++++++. . .+..+..++..+|++..++ +++++.+|+|+++||..|+++|
T Consensus 124 ~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i 201 (413)
T 1xes_A 124 EVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTP-D-LPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLA 201 (413)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCC-E-ESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCC-c-cchHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999998873 3 5778899999999965453 8999999999999999999999
Q ss_pred HcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCC
Q 012522 152 KAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231 (461)
Q Consensus 152 ~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag 231 (461)
++|.++++||+|+|.+|..
T Consensus 202 ~~G~~~~vLvvg~E~~s~~------------------------------------------------------------- 220 (413)
T 1xes_A 202 ENNRGARVLVICSETTAVT------------------------------------------------------------- 220 (413)
T ss_dssp HTSTTCCEEEEEEECTTTT-------------------------------------------------------------
T ss_pred HcCCCCEEEEEEehhhhhh-------------------------------------------------------------
Confidence 9999999999999998861
Q ss_pred CCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhc
Q 012522 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQK 311 (461)
Q Consensus 232 ~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~ 311 (461)
|.+ +++ ...++.. .+.+ +||||+|+||++.+..
T Consensus 221 -~~~-----------------------~~d-----~~~~~~~--------~~~l-------fGDGA~A~vl~~~~~~--- 253 (413)
T 1xes_A 221 -FRG-----------------------PSE-----THLDSLV--------GQAL-------FGDGASALIVGADPIP--- 253 (413)
T ss_dssp -CCC-----------------------CCT-----TCHHHHH--------HHHH-------BCCEEEEEEEESSCCT---
T ss_pred -hcC-----------------------CCc-----cchhhcc--------ccee-------EecccEEEEEecCCCc---
Confidence 000 000 0000000 1123 7999999999875431
Q ss_pred CC-CeeEEEEEeeeeccCCC----------------CCC--------CcHHHHHHHHHHHcCCC-CCCccEEEecCCChH
Q 012522 312 GL-PILGVFRSFSAVGVDPS----------------VMG--------IGPAVAIPAAVKSAGLQ-IDDINLFEINEAFAS 365 (461)
Q Consensus 312 g~-~~~a~i~g~~~~~~~p~----------------~~~--------~~~~~ai~~aL~~AGl~-~~DID~~eiheafa~ 365 (461)
+. .+...+.+.+.... |. .++ .....+++++|+++|++ .+|| +|.+|+++..
T Consensus 254 ~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~ 331 (413)
T 1xes_A 254 QVEKACFEIVWTAQTVV-PNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKL-FWVVHPGGRA 331 (413)
T ss_dssp TTSCCSEEEEEEEEEEC-TTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHH
T ss_pred cccCCceEEEeeeeEEc-CCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECCCCHH
Confidence 21 11123433322110 00 011 11235788999999998 8888 8999999998
Q ss_pred HHHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHccCCC-------CCEEEEEecccCccee-EEEEE
Q 012522 366 QYVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRRGKD-------CRFGVISMCIGSGMGA-AAVFE 436 (461)
Q Consensus 366 ~~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~-------~~~gl~~~~~g~G~g~-A~v~~ 436 (461)
......+.||++++++..+ --.--+||...++-...+.+++.+-++. | ....|+... |.|+.+ +++|+
T Consensus 332 i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~--G~~~~G~~~d~vll~~f-G~G~t~~~~ll~ 408 (413)
T 1xes_A 332 ILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQN--GCSTTGEGLEMGVLFGF-GPGLTIETVVLK 408 (413)
T ss_dssp HHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHT--TCSBTTTTCSEEEEEEE-ETTTEEEEEEEE
T ss_pred HHHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhcccc--CCCCCCCCcceEEEEEe-cCCcEEeEEEEE
Confidence 8888999999999986321 0023589999999888888877765422 3 145555443 555555 44554
Q ss_pred E
Q 012522 437 R 437 (461)
Q Consensus 437 ~ 437 (461)
.
T Consensus 409 ~ 409 (413)
T 1xes_A 409 S 409 (413)
T ss_dssp E
T ss_pred e
Confidence 3
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=195.72 Aligned_cols=253 Identities=18% Similarity=0.161 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe-CCCCchHHHHHHHHHHHHHc
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NRQCSSGLQAVADVATAIKA 153 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~CaSgl~Al~~A~~~I~s 153 (461)
.+|+.+|+++||+++|++++|||.||+++++ +.. .+..+.+++..||++.....+++ +.+|+++++||..|..+|++
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~-~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a 188 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSA-NPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLG 188 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCC-SSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCC-CCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Confidence 5999999999999999999999999999987 444 67889999999999654448999 79999999999999999997
Q ss_pred ----CCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 154 ----GLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 154 ----G~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
|.++.|||+|+|.+|.... + . .+ + ..++
T Consensus 189 ~~~~G~~~~vLVvg~E~~S~~~~---------~-------------~----------------~~-----~----~~~~- 220 (465)
T 3e1h_A 189 HTARGKPARILVLALEVSTTMVR---------S-------------E----------------LE-----S----IDAL- 220 (465)
T ss_dssp HHHTTCCCEEEEEEEECCGGGHH---------H-------------H----------------HH-----H----HHHH-
T ss_pred ccccCCCCEEEEEEEeecchhcC---------c-------------c----------------cc-----c----cccc-
Confidence 9999999999999987110 0 0 00 0 0000
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
.+ .+..+..+||||+|+||...+...
T Consensus 221 ---~~---------------------------------------------------d~~t~~LFGDGAaAvVl~~~~~~~ 246 (465)
T 3e1h_A 221 ---QE---------------------------------------------------TRIGIALFSDCASAVILSNGIGEA 246 (465)
T ss_dssp ---TC---------------------------------------------------CCCHHHHBCCEEEEEEEECCTTCC
T ss_pred ---cc---------------------------------------------------ccccccccccceeEEEEEccCCCc
Confidence 00 001122389999999998754211
Q ss_pred hcCCCeeEEEEEeeeeccC-----------CC----CCCC--------cHHHHHHHHHHH-------cCCCCCCccEEEe
Q 012522 310 QKGLPILGVFRSFSAVGVD-----------PS----VMGI--------GPAVAIPAAVKS-------AGLQIDDINLFEI 359 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~~~~-----------p~----~~~~--------~~~~ai~~aL~~-------AGl~~~DID~~ei 359 (461)
....+...+.++...... .. ..+. ....+++++|++ +|++++|||+| +
T Consensus 247 -~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~~DId~~-~ 324 (465)
T 3e1h_A 247 -PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWA-M 324 (465)
T ss_dssp -TTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE-E
T ss_pred -cccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHceEE-e
Confidence 001122234443221100 00 0011 123577888887 68999999988 9
Q ss_pred cCCChHHHHHHHHHcCCCCCCcCCCCC-cccccCchhhHHHHHHHHHHHHHHcc----CC-C---CCEEEEEecccCcce
Q 012522 360 NEAFASQYVYCIKKLGLDPEKVNVNGG-AVALGHPLGATGARCVATLLSEMKRR----GK-D---CRFGVISMCIGSGMG 430 (461)
Q Consensus 360 heafa~~~~~~~e~LGl~~~~vn~~GG-~~~~Ghp~gatG~~~~~~~~~~L~~~----~~-~---~~~gl~~~~~g~G~g 430 (461)
|+++..+.....+.|||+++++-.+=- .--+||...+|-. -++.+++++ ++ + ..+++... .|.|+.
T Consensus 325 Hqan~rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip----~aL~~~~~~~~g~l~~Gg~~~d~vll~g-fG~Glt 399 (465)
T 3e1h_A 325 HPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIF----SVLNRLREKDMDALAPGGKVKEYVVGCA-FGPGIN 399 (465)
T ss_dssp CCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHH----HHHHHHTSTTTTSCSSSSCCCSEEEEEE-EETTTE
T ss_pred cCCChHHHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHH----HHHHHHHHhcccccCCCCCCCCEEEEEE-EhHHHh
Confidence 999999999999999999998632100 0124777777644 333444322 11 2 14555544 366666
Q ss_pred eEEEEEEc
Q 012522 431 AAAVFERG 438 (461)
Q Consensus 431 ~A~v~~~~ 438 (461)
+..++-+.
T Consensus 400 ~~~~llr~ 407 (465)
T 3e1h_A 400 VEMCMLKR 407 (465)
T ss_dssp EEEEEEEE
T ss_pred hhheeeEE
Confidence 64444443
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=9e-21 Score=193.92 Aligned_cols=243 Identities=14% Similarity=0.089 Sum_probs=174.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
.+.+..+|+.+|+++||++ ++|++||.|++|+.+++.. .+..+..++..+|++.++++++++++|+|++.||..|++
T Consensus 47 ~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~ 123 (396)
T 1xpm_A 47 VNQDIVSMGANAAKDIITD--EDKKKIGMVIVATESAVDA-AKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKD 123 (396)
T ss_dssp TTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCC-CCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHH
Confidence 4678999999999999988 7899999999999888765 678899999999997568999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++++||+|+|. +...
T Consensus 124 ~I~sg~~~~vLvvg~e~-s~~~---------------------------------------------------------- 144 (396)
T 1xpm_A 124 YLATRPNEKVLVIATDT-ARYG---------------------------------------------------------- 144 (396)
T ss_dssp HHTTCTTCEEEEEEEEE-ECCC----------------------------------------------------------
T ss_pred HHHcCCCCEEEEEeehh-hccc----------------------------------------------------------
Confidence 99999999999999996 4310
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCC-CCCccccCCCCcccccceEEEEcchhHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLA 308 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~-~~g~lt~~~~~~~~DGAaAvvL~s~~~A 308 (461)
++ +++++ +||||+|+||++.+
T Consensus 145 -------------------------------------------------~~~~~~~~-------~GdGA~A~vl~~~~-- 166 (396)
T 1xpm_A 145 -------------------------------------------------LNSGGEPT-------QGAGAVAMVIAHNP-- 166 (396)
T ss_dssp -------------------------------------------------TTCSSGGG-------CEEEEEEEEEEESC--
T ss_pred -------------------------------------------------cCCCCCcc-------cccceEEEEeccCC--
Confidence 00 01223 79999999998642
Q ss_pred HhcCCCeeEEEEEeeeec------cCCCC------CCCc--------HHHHHHHHHHHcCCCCCCccEEEecCCChHHHH
Q 012522 309 VQKGLPILGVFRSFSAVG------VDPSV------MGIG--------PAVAIPAAVKSAGLQIDDINLFEINEAFASQYV 368 (461)
Q Consensus 309 ~~~g~~~~a~i~g~~~~~------~~p~~------~~~~--------~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~ 368 (461)
.++....+.+... ..|.. .+.. ...+++++|+++|++++|||+|.+|+++.....
T Consensus 167 -----~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did~~~~H~~~~~~~~ 241 (396)
T 1xpm_A 167 -----SILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPFTKMGK 241 (396)
T ss_dssp -----SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHHHH
T ss_pred -----ceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCCchHHHH
Confidence 1332222211111 11211 1111 457899999999999999999999999998888
Q ss_pred HHHHHc-----CCCCCCcC--C---CCCcccccCchhhHHHHHHHHHHHHHHccC-CCCCEEEEEecccCcce-eEEEEE
Q 012522 369 YCIKKL-----GLDPEKVN--V---NGGAVALGHPLGATGARCVATLLSEMKRRG-KDCRFGVISMCIGSGMG-AAAVFE 436 (461)
Q Consensus 369 ~~~e~L-----Gl~~~~vn--~---~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~-~~~~~gl~~~~~g~G~g-~A~v~~ 436 (461)
...+.| +++++++. . .--.--+||...+|-...+.+++.+ +++ +|.++.++++ |.|.. .+++++
T Consensus 242 ~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~--~~l~~Gd~ill~s~--GsG~~~~~~~~~ 317 (396)
T 1xpm_A 242 KALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLEN--RDLQAGETIGLFSY--GSGSVGEFYSAT 317 (396)
T ss_dssp HHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHH--SCCCTTCEEEEEEE--ETTTEEEEEEEE
T ss_pred HHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHHc--CCCCCCCEEEEEEE--CcchhheEEEEE
Confidence 777877 66654431 1 0001348999988877666666554 322 3556666654 45544 345555
Q ss_pred Eccch
Q 012522 437 RGDCV 441 (461)
Q Consensus 437 ~~~~~ 441 (461)
..+.+
T Consensus 318 v~~~~ 322 (396)
T 1xpm_A 318 LVEGY 322 (396)
T ss_dssp ECTTG
T ss_pred EcccH
Confidence 55433
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=9.7e-20 Score=189.14 Aligned_cols=98 Identities=12% Similarity=0.156 Sum_probs=90.4
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCC--CCCCCeEEeCCCCchHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF--PETVPLRTVNRQCSSGLQAVADV 147 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl--~~~~~~~~v~~~CaSgl~Al~~A 147 (461)
+++++.+|+.+|+++||+++|++|++||.|++++.+++.. .+..+..++..+|+ +..+++++++.+|+|++.||..|
T Consensus 48 ~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~-~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A 126 (450)
T 2f82_A 48 ELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNC 126 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCS-SSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCC-CCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHH
Confidence 4788999999999999999999999999999999887765 67889999999998 45789999999999999999999
Q ss_pred HHHHHcCCC--CEEEEEeecccc
Q 012522 148 ATAIKAGLY--DIGIAAGLESMT 168 (461)
Q Consensus 148 ~~~I~sG~~--d~vLv~G~E~~s 168 (461)
.++|++|.+ +.+||+|+|.++
T Consensus 127 ~~~I~sg~~~~~~vLVvg~e~~~ 149 (450)
T 2f82_A 127 VNWVESNSWDGRYGLVICTDSAV 149 (450)
T ss_dssp HHHHHSTTCCSCEEEEEEEEEEC
T ss_pred HHHHHcCCCcCCeEEEEEeeecc
Confidence 999999997 999999999875
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-19 Score=219.07 Aligned_cols=264 Identities=20% Similarity=0.232 Sum_probs=197.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC------------------ccchHHHHHHHHcCCCCCCCeEE
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS------------------TRAMECRMAAFYAGFPETVPLRT 132 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~------------------~~~~~a~~ia~~lGl~~~~~~~~ 132 (461)
..|+.+++.+||++||+++++++ +|++|+...++. .....+..++..+|+ ++|+++
T Consensus 79 ~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l--~Gps~t 156 (2512)
T 2vz8_A 79 LRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF--KGPSIT 156 (2512)
T ss_dssp HHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC--CCCcee
Confidence 46899999999999999987765 688887654321 012367889999999 799999
Q ss_pred eCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHH
Q 012522 133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE 212 (461)
Q Consensus 133 v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~ 212 (461)
|+++|+|++.||++|++.|++|++|++|++|++.+..... ..++
T Consensus 157 v~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~---------------------~~~~--------------- 200 (2512)
T 2vz8_A 157 IDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNS---------------------SLQF--------------- 200 (2512)
T ss_dssp EECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHH---------------------HHHH---------------
T ss_pred eccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHH---------------------HHHH---------------
Confidence 9999999999999999999999999999999998765100 0000
Q ss_pred HHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC--CCccccCCC
Q 012522 213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNA 290 (461)
Q Consensus 213 ~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~--~g~lt~~~~ 290 (461)
. +. -.+++|. .+|| ||. ||++
T Consensus 201 ---------~------~~------------------------~~ls~~g------------~c~~-Fd~~adG~~----- 223 (2512)
T 2vz8_A 201 ---------M------KL------------------------GMLSQDG------------TCRS-FDAEGTGYC----- 223 (2512)
T ss_dssp ---------H------HT------------------------TCBCTTC------------SCCS-SSTTCCCBC-----
T ss_pred ---------c------cC------------------------CCCCCCC------------CCCC-CCCCCCCcc-----
Confidence 0 00 1234443 3455 876 8998
Q ss_pred CcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccCCC------CCCCcHHHHHHHHHHHcCCCCCCccEEEecCCCh
Q 012522 291 SQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS------VMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFA 364 (461)
Q Consensus 291 ~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~------~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa 364 (461)
.|||++++||.+.+.|. ++++.|.|++.+..... ..+.+...+++++|++||++++||||+|.|-.-+
T Consensus 224 --~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT 297 (2512)
T 2vz8_A 224 --RAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGT 297 (2512)
T ss_dssp --BBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCC
T ss_pred --eeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCC
Confidence 89999999999998875 58999999988764321 1233567899999999999999999999997765
Q ss_pred H----HHHH-HHHHcCCC-CCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C-------------C----------
Q 012522 365 S----QYVY-CIKKLGLD-PEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G-------------K---------- 414 (461)
Q Consensus 365 ~----~~~~-~~e~LGl~-~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~-------------~---------- 414 (461)
. .+.. ..+.+|-. ..++.++.-+..+||..+|+|+..++.++..|+.+ + +
T Consensus 298 ~~gD~~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~ 377 (2512)
T 2vz8_A 298 KVGDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVV 377 (2512)
T ss_dssp TTHHHHHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEEC
T ss_pred CCCCHHHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCceEec
Confidence 4 2222 23344432 23455566677899999999999999999999876 1 0
Q ss_pred ------CCCEEEEEecccCcceeEEEEEEcc
Q 012522 415 ------DCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 415 ------~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
..+++.+++++-||.+.++||+...
T Consensus 378 ~~~~~~~~~~a~vnsfG~gG~Nah~il~~~~ 408 (2512)
T 2vz8_A 378 DRPLPIRGGNVGINSFGFGGSNVHVILQPNS 408 (2512)
T ss_dssp CSCCBCCSCCEEEEEEETTTEEEEEEEEECC
T ss_pred CCCccCCCCeEEEeccCCCCceeEEEEccCC
Confidence 1135667777778889999998653
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-19 Score=183.83 Aligned_cols=233 Identities=13% Similarity=0.086 Sum_probs=165.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
++++..+|+.+|+++||++++ +++||.|++++.+++.. .+..+..++..||++..+++++++.+|++++.||..|..
T Consensus 52 ~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~-~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~ 128 (388)
T 3v4n_A 52 ISQDIVTFAANAAEAILTKED--KEAIDMVIVGTESSIDE-SKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKN 128 (388)
T ss_dssp TTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCc-CccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHHH
Confidence 468999999999999999987 89999999999988775 678899999999997558999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhh
Q 012522 150 AIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ 229 (461)
+|++|.++.+||+|+|.++...
T Consensus 129 ~i~sg~~~~vLVvg~e~~s~~~---------------------------------------------------------- 150 (388)
T 3v4n_A 129 HVALHPDKKVLVVAADIAKYGL---------------------------------------------------------- 150 (388)
T ss_dssp HHHHCTTCEEEEEEEEEECCCT----------------------------------------------------------
T ss_pred HHhcCCCCEEEEEEehhhcccC----------------------------------------------------------
Confidence 9999999999999999987610
Q ss_pred CCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHH
Q 012522 230 SGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAV 309 (461)
Q Consensus 230 ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 309 (461)
. . ++.++ +||||+|+||...+.
T Consensus 151 ----~--------------------------------------------~-~~~~l-------fGDGA~A~ll~~~~~-- 172 (388)
T 3v4n_A 151 ----N--------------------------------------------S-GGEPT-------QGAGAVAMLVSSEPR-- 172 (388)
T ss_dssp ----T--------------------------------------------C-TTGGG-------CEEEEEEEEEEESCS--
T ss_pred ----C--------------------------------------------C-CCCCc-------cccceeEEEeecCCC--
Confidence 0 0 00012 799999999987531
Q ss_pred hcCCCeeEEEEEeeee--c----cCCCC--C----C--------CcHHHHHHHHHHHcCCCCCCccEEEecCCChHHH--
Q 012522 310 QKGLPILGVFRSFSAV--G----VDPSV--M----G--------IGPAVAIPAAVKSAGLQIDDINLFEINEAFASQY-- 367 (461)
Q Consensus 310 ~~g~~~~a~i~g~~~~--~----~~p~~--~----~--------~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~-- 367 (461)
++......... . ..|.. + + .....+++++|+++|++++|||+|.+|++|..+.
T Consensus 173 -----il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~Hqp~~k~~~k 247 (388)
T 3v4n_A 173 -----ILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAFHIPYTKMGKK 247 (388)
T ss_dssp -----SEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSSHHHHHH
T ss_pred -----ceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEeCCCcchHHHH
Confidence 11110000000 0 01111 0 0 1123678899999999999999999999886432
Q ss_pred ----------HHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CCCCCEEEEEecccCccee
Q 012522 368 ----------VYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GKDCRFGVISMCIGSGMGA 431 (461)
Q Consensus 368 ----------~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~~~~~gl~~~~~g~G~g~ 431 (461)
....+.|+++.+++..+ .--+||...+|-...+.+++.+- ++ .+|.++.++++ |.|..+
T Consensus 248 a~~ril~~~~~~~~~~l~~~~e~~~~~--~~~~GN~~sASi~l~L~~~l~~~-g~~~~Gd~ill~s~--GsG~~a 317 (388)
T 3v4n_A 248 ALLAKISDQTEAEQERILARYEESIIY--SRRVGNLYTGSLYLGLISLLENA-TTLTAGNQIGLFSY--GSGAVA 317 (388)
T ss_dssp HHHHHSTTSCHHHHHHHHHHHHHHTTT--GGGTCCCGGGHHHHHHHHHHHHC-SSCCTTCEEEEEEE--ETTTEE
T ss_pred HHHHHHhcccHHHHHHhCCCHHHHhhH--HHhcCchHHHHHHHHHHHHHHhc-CcCCCCCEEEEEEe--cCccee
Confidence 23456677776654322 24579999888666565555541 11 23556666655 555444
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.5e-18 Score=175.81 Aligned_cols=111 Identities=13% Similarity=0.087 Sum_probs=94.4
Q ss_pred cEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHH---HcCCCC
Q 012522 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF---YAGFPE 126 (461)
Q Consensus 50 ~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~---~lGl~~ 126 (461)
..++.+.+.+.+... ..+++..+|+.+|+++||+++|++|++||.|++++.+++.. .+..+.+++. .+|+ .
T Consensus 53 ~~~~~~~Gi~~r~~~----~~~e~~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~-~ps~a~~v~~~L~~lG~-~ 126 (478)
T 2p8u_A 53 GKYTIGLGQAKMGFC----TDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDK-SKSVKTNLMQLFEESGN-T 126 (478)
T ss_dssp TCCCCCCCCCEEECC----CTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCS-SSCHHHHHGGGTTTTTC-C
T ss_pred hHhecccCceEEEeC----CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCccc-CccHHHHHHHHHhhcCC-C
Confidence 345667777776532 24678999999999999999999999999999999988765 5778888884 4555 4
Q ss_pred CCCeEEeCCCCchHHHHHHHHHHHHHcCC--CCEEEEEeecc
Q 012522 127 TVPLRTVNRQCSSGLQAVADVATAIKAGL--YDIGIAAGLES 166 (461)
Q Consensus 127 ~~~~~~v~~~CaSgl~Al~~A~~~I~sG~--~d~vLv~G~E~ 166 (461)
.+++++++.+|++++.||..|.++|++|. .+.|||+|+|.
T Consensus 127 ~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Ei 168 (478)
T 2p8u_A 127 DIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDI 168 (478)
T ss_dssp CCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE
T ss_pred CceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeee
Confidence 68999999999999999999999999999 99999999994
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.9e-16 Score=161.78 Aligned_cols=94 Identities=15% Similarity=0.120 Sum_probs=83.0
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCC--CCCCeEEeCCCCchHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP--ETVPLRTVNRQCSSGLQAVADV 147 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~--~~~~~~~v~~~CaSgl~Al~~A 147 (461)
++++..+|+++|+++||+++|++|++||.|++++.+++.. .+..+..++..+|++ .++.+++++.+|+++..||..|
T Consensus 50 ~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~-~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A 128 (460)
T 2wya_A 50 VQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDK-SKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNA 128 (460)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCS-SSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHH
Confidence 5789999999999999999999999999999999998877 678888898888752 3578899999999999999999
Q ss_pred HHHHHcCCCCEEEEEee
Q 012522 148 ATAIKAGLYDIGIAAGL 164 (461)
Q Consensus 148 ~~~I~sG~~d~vLv~G~ 164 (461)
.++|++|..+.++++.+
T Consensus 129 ~~~i~~g~~~~~lvvv~ 145 (460)
T 2wya_A 129 ANWMESSSWDGRYAMVV 145 (460)
T ss_dssp HHHHTSTTCCSCEEEEE
T ss_pred HHHHHhccccceEEEEE
Confidence 99999998876655543
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=91.73 E-value=0.39 Score=47.11 Aligned_cols=88 Identities=15% Similarity=0.151 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC--------------eEEeCCCCc-hHH
Q 012522 77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP--------------LRTVNRQCS-SGL 141 (461)
Q Consensus 77 L~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~--------------~~~v~~~Ca-Sgl 141 (461)
.+.+.+++.|+++|++|+|+|.|+.|....- +..+...+..++|+|.+.. ++.=..+|+ |..
T Consensus 208 aA~~ti~~~l~d~g~~~~d~D~ivtgdL~q~---g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~ 284 (347)
T 3lma_A 208 AAADTIKQHLEDLGRTPDDYDLILTGDLSGV---GSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAV 284 (347)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEESCHHH---HHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHH
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEecCChHHH---HHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHH
Confidence 4456668999999999999999997542111 3345566777888864221 111224555 344
Q ss_pred HHHHHHHHHHHcCCCCEEEEEeeccc
Q 012522 142 QAVADVATAIKAGLYDIGIAAGLESM 167 (461)
Q Consensus 142 ~Al~~A~~~I~sG~~d~vLv~G~E~~ 167 (461)
..-......++.|+.+.+|++++-..
T Consensus 285 v~~~~~~~~~~~g~~~ril~~~tGal 310 (347)
T 3lma_A 285 VTFAHIFKEIEAGRLNRVLVVATGAL 310 (347)
T ss_dssp HHHHTHHHHHHTTSCSEEEEEEEEEC
T ss_pred HHHHHHHHHHhcCcccEEEEEecccc
Confidence 44577788899999999999997653
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=91.07 E-value=0.99 Score=44.14 Aligned_cols=77 Identities=19% Similarity=0.250 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN-----EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih-----eafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
..|++++|+++|++++|||++... ..++....+..+.||+..... .-+ ..||+|...-+.+..++-+
T Consensus 67 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~~~a------~di--~~~C~g~~~aL~~A~~~i~ 138 (350)
T 4ewp_A 67 VGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATPAPA------YDV--SAACAGYCYGVAQADALVR 138 (350)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTTSCE------EEE--ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCCceE------EEe--ecchhhHHHHHHHhhhhhh
Confidence 589999999999999999988643 234556667788999975431 112 2366665554444444443
Q ss_pred cCCCCCEEEEE
Q 012522 412 RGKDCRFGVIS 422 (461)
Q Consensus 412 ~~~~~~~gl~~ 422 (461)
.. ..+.+|+.
T Consensus 139 ~g-~~~~~Lvv 148 (350)
T 4ewp_A 139 SG-TARHVLVV 148 (350)
T ss_dssp TT-SCSEEEEE
T ss_pred CC-CccceeEe
Confidence 31 34444543
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=88.36 E-value=0.83 Score=44.71 Aligned_cols=82 Identities=15% Similarity=0.055 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHHH--
Q 012522 77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATA-- 150 (461)
Q Consensus 77 L~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~~-- 150 (461)
...++++++|+++|++++|||.++. +.. +...-..++..+|+|.+....++ |..++|-..+|..+...
T Consensus 247 ~~~~~i~~~l~~~gl~~~did~~v~----Hq~--~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~ 320 (345)
T 3s21_A 247 LAQKTFVAAKQVLGWAVEELDQFVI----HQV--SRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGR 320 (345)
T ss_dssp HHHHHHHHHHHHHCCCGGGCSEEEE----CCS--CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEe----CCC--CHHHHHHHHHHcCcCHHHceeeHhhcCchHHHHHHHHHHHHHHcCC
Confidence 4457778999999999999998886 221 23345667888999754432222 45555666666655544
Q ss_pred HHcCCCCEEEEEeecc
Q 012522 151 IKAGLYDIGIAAGLES 166 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~ 166 (461)
++.| |.+|++|+..
T Consensus 321 ~~~G--d~vll~~~G~ 334 (345)
T 3s21_A 321 LKKG--DRIALLGIGS 334 (345)
T ss_dssp CCTT--CEEEEEEEET
T ss_pred CCCC--CEEEEEEECh
Confidence 4444 6888877644
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=87.48 E-value=0.75 Score=45.42 Aligned_cols=82 Identities=13% Similarity=0.103 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATAI 151 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~~I 151 (461)
+...++++++|+++|++++|||.++.= .. ....-..++..+|+|...-..++ |..++|-..+|..+...+
T Consensus 254 ~~~~~~i~~~L~~~gl~~~did~~v~H----q~--n~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sAsi~l~L~~~~~~l 327 (359)
T 3h78_A 254 QTLVRIAGEMLAAHELTLDDIDHVICH----QP--NLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPDI 327 (359)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEEC----CS--CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHGGGS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEC----CC--CHHHHHHHHHHhCcCHHHhhhhhhcccchHHHHHHHHHHHHHHhC
Confidence 345578899999999999999988752 21 23445667888999754433332 455666677777666655
Q ss_pred HcCCCCEEEEEeec
Q 012522 152 KAGLYDIGIAAGLE 165 (461)
Q Consensus 152 ~sG~~d~vLv~G~E 165 (461)
+.| |.+|++|+-
T Consensus 328 ~~G--d~vll~~fG 339 (359)
T 3h78_A 328 QPG--QRVLVLTYG 339 (359)
T ss_dssp CTT--CEEEEEEEE
T ss_pred CCC--CEEEEEEEc
Confidence 555 677777643
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=86.97 E-value=1.3 Score=42.49 Aligned_cols=80 Identities=16% Similarity=0.162 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHHHHH
Q 012522 77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATAIK 152 (461)
Q Consensus 77 L~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~~I~ 152 (461)
-..++++++|+++|++++|||.++.-.. +......+...+|++......+. +..++|+..+|..+ ++
T Consensus 213 ~~~~~i~~al~~agl~~~did~~~~H~~------~~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~~---~~ 283 (313)
T 1zow_A 213 IMGDASTRVVEKANLTSDDIDLFIPHQA------NIRIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQE---LK 283 (313)
T ss_dssp HHHHHHHHHHHHTTCCGGGCSEEEECCS------CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHHH---HH
Confidence 5667889999999999999998875211 22333456778898643222222 35556666666554 44
Q ss_pred cCC---CCEEEEEeec
Q 012522 153 AGL---YDIGIAAGLE 165 (461)
Q Consensus 153 sG~---~d~vLv~G~E 165 (461)
.|+ -|.+|+.++-
T Consensus 284 ~~~~~~g~~vl~~~~G 299 (313)
T 1zow_A 284 NGKLKDDDTIVLVGFG 299 (313)
T ss_dssp TTCCCTTCEEEEEEEE
T ss_pred cCCCCCCCEEEEEEEc
Confidence 454 3788887754
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=86.85 E-value=1.5 Score=43.22 Aligned_cols=81 Identities=10% Similarity=-0.031 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeC----CCCchHHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN----RQCSSGLQAVADVATAI 151 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~----~~CaSgl~Al~~A~~~I 151 (461)
+...++++++|+++|++++|||.++.= .. ....-..++..+|+|...-..++. ..++|-..+|. ..+
T Consensus 266 ~~~~~~i~~~L~~~gl~~~did~~v~H----q~--n~~i~~~~~~~Lgl~~ek~~~~l~~~GNtssAsipl~L~---~~~ 336 (365)
T 3gwa_A 266 AEVPRAADRLLALAGEPRENIDCFVLH----QA--NRFMLDALRKKMKIPEHKFPVLMEHCGNTVSSTLPLALE---TMR 336 (365)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEEC----CC--CHHHHHHHHHHHTCCGGGSCCCCTTTCBCGGGHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEc----CC--CHHHHHHHHHHhCCCHHHHHHHHhcccchHHHHHHHHHH---HHH
Confidence 445678899999999999999988752 21 234556788899997654444443 22333333333 345
Q ss_pred HcCCC---CEEEEEeec
Q 012522 152 KAGLY---DIGIAAGLE 165 (461)
Q Consensus 152 ~sG~~---d~vLv~G~E 165 (461)
+.|.. |.+|++|+-
T Consensus 337 ~~g~~~~Gd~vll~~fG 353 (365)
T 3gwa_A 337 ANGTLARGMRLMLLGFG 353 (365)
T ss_dssp HTTCCCTTCEEEEEEEE
T ss_pred HcCCCCCCCEEEEEEEe
Confidence 55543 678887753
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=86.84 E-value=1.2 Score=43.18 Aligned_cols=82 Identities=13% Similarity=0.163 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATAI 151 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~~I 151 (461)
+...++++++|+++|++++|||.++.-. . +...-..+...+|++......++ |..++|...+|..+ +
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~~H~----~--~~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~ 294 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLVPHQ----A--NTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHG---L 294 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECC----C--CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcC----C--CHHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHH---H
Confidence 4567889999999999999999887621 1 23344457788999643322222 34455555555544 4
Q ss_pred HcCC---CCEEEEEeecc
Q 012522 152 KAGL---YDIGIAAGLES 166 (461)
Q Consensus 152 ~sG~---~d~vLv~G~E~ 166 (461)
+.|. -|.+|++|+..
T Consensus 295 ~~~~~~~G~~vll~~~G~ 312 (331)
T 2x3e_A 295 RQGILRDGGNMVLTGFGA 312 (331)
T ss_dssp HTTCSCTTCEEEEEEEET
T ss_pred HhCCCCCCCEEEEEEEeH
Confidence 5553 36888887654
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=86.22 E-value=1.4 Score=42.60 Aligned_cols=84 Identities=13% Similarity=0.105 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeE-Ee----CCCCchHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR-TV----NRQCSSGLQAVADVATA 150 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~-~v----~~~CaSgl~Al~~A~~~ 150 (461)
+...++++++|+++|++++|||.++.-. . +......+...+|++...... ++ |..++|...+|..+...
T Consensus 232 ~~~~~~i~~al~~agl~~~dId~~~~H~----~--~~~~~~~~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~~~~ 305 (335)
T 1u6e_A 232 FKMGDVGRRAMDAAGVRPDQIDVFVPHQ----A--NSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTT 305 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEECC----S--CHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECC----C--CHHHHHHHHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHHHHc
Confidence 3566789999999999999999887522 1 233444577789996542221 11 34445555455444332
Q ss_pred HHcCCCCEEEEEeec
Q 012522 151 IKAGLYDIGIAAGLE 165 (461)
Q Consensus 151 I~sG~~d~vLv~G~E 165 (461)
-+...-|.+|+.++-
T Consensus 306 ~~~~~g~~~l~~~~G 320 (335)
T 1u6e_A 306 GAAKPGDLALLIGYG 320 (335)
T ss_dssp TSSCTTCEEEEEEEE
T ss_pred CCCCCCCEEEEEEEe
Confidence 111124788887753
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=85.60 E-value=1.6 Score=42.42 Aligned_cols=82 Identities=16% Similarity=0.192 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeE-E---e-CCCCchHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR-T---V-NRQCSSGLQAVADVATA 150 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~-~---v-~~~CaSgl~Al~~A~~~ 150 (461)
+...++++++|+++|++++|||.++.-. . +......+...+|++...... + + |..++|...+|..+
T Consensus 231 ~~~~~~i~~aL~~agl~~~did~v~~H~---~---~~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~--- 301 (339)
T 1mzj_A 231 ADVVPAAREALEVAGLTVGDLVAFVPHQ---A---NLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRL--- 301 (339)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEECC---S---CHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECC---C---CHHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHHHH---
Confidence 4566789999999999999999887622 1 223344577889996541221 1 1 34455556665544
Q ss_pred HHcCC---CCEEEEEeecc
Q 012522 151 IKAGL---YDIGIAAGLES 166 (461)
Q Consensus 151 I~sG~---~d~vLv~G~E~ 166 (461)
++.|. -|.+|++++-.
T Consensus 302 ~~~g~~~~G~~vll~~~G~ 320 (339)
T 1mzj_A 302 VRSGAVPGGGPALMIGFGA 320 (339)
T ss_dssp HHHTSSCTTCEEEEEEEET
T ss_pred HHcCCCCCCCEEEEEEEch
Confidence 44443 36888877653
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=85.46 E-value=2.4 Score=41.00 Aligned_cols=69 Identities=7% Similarity=0.029 Sum_probs=44.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA-----FASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea-----fa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
..|++++|+++|++++|||.+.+-.. .+.......+.||+...+. ..+. -..++|+..+..+...++.
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~------~~v~-~aC~s~~~al~~A~~~i~~ 129 (321)
T 3il6_A 57 HQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFA------FDIS-AACSGFVYALSMAEKLVLS 129 (321)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTTCEE------EEEC-CGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCCceE------EEeC-cccHHHHHHHHHHHHHHHC
Confidence 47999999999999999999875432 2344566778899975321 2222 2223445555566666665
Q ss_pred c
Q 012522 412 R 412 (461)
Q Consensus 412 ~ 412 (461)
.
T Consensus 130 g 130 (321)
T 3il6_A 130 G 130 (321)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A* | Back alignment and structure |
|---|
Probab=84.42 E-value=2.6 Score=41.83 Aligned_cols=44 Identities=23% Similarity=0.152 Sum_probs=34.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA----FASQYVYCIKKLGLDPEK 380 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea----fa~~~~~~~e~LGl~~~~ 380 (461)
..|++++|+++|++++|||++.+.-+ ++.......+.||+....
T Consensus 86 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~ 133 (379)
T 3euo_A 86 VEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRL 133 (379)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCCCCCe
Confidence 47899999999999999999875432 345566778899997643
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=84.34 E-value=2 Score=40.91 Aligned_cols=80 Identities=20% Similarity=0.240 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHHHHH
Q 012522 77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATAIK 152 (461)
Q Consensus 77 L~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~~I~ 152 (461)
...++++++|+++|++++|||.++.-. . +......+...+|++......+. +..++|+..+|..+ ++
T Consensus 211 ~~~~~i~~al~~agl~~~did~~~~H~----~--~~~~~~~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~L~~~---~~ 281 (309)
T 2ebd_A 211 SMEEVCREVLEKAGVKPEEVSLVIPHQ----A--NVRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEA---IK 281 (309)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEECC----S--CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcC----C--CHHHHHHHHHHhCCCHHHhhhhHhhhcchHHHHHHHHHHHH---HH
Confidence 456889999999999999999877522 1 22233457778998632211111 45566777666555 44
Q ss_pred cCCC---CEEEEEeec
Q 012522 153 AGLY---DIGIAAGLE 165 (461)
Q Consensus 153 sG~~---d~vLv~G~E 165 (461)
.|+. |.+|+.++-
T Consensus 282 ~g~~~~G~~~l~~~~G 297 (309)
T 2ebd_A 282 EGKVKRGDLILMTAMG 297 (309)
T ss_dssp TTCCCTTCEEEEEEEE
T ss_pred cCCCCCCCEEEEEEEc
Confidence 4543 788887753
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=83.26 E-value=3.4 Score=41.58 Aligned_cols=42 Identities=24% Similarity=0.290 Sum_probs=33.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINE----AFASQYVYCIKKLGLDP 378 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihe----afa~~~~~~~e~LGl~~ 378 (461)
..|++++|+++|++++|||.+.+-- ..+.......+.||+..
T Consensus 142 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~ 187 (413)
T 3v7i_A 142 ERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRG 187 (413)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHHhCCCC
Confidence 4799999999999999999987533 23445567788999986
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=83.22 E-value=2.5 Score=40.95 Aligned_cols=80 Identities=18% Similarity=0.214 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATAI 151 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~~I 151 (461)
+...++++++|+++|++++|||.++. +.. +...-..++..+|+|......++ |..++|-..+|..+ +
T Consensus 234 ~~~~~~i~~~l~~~gl~~~did~~~~----Hq~--~~~i~~~~~~~lgl~~~~~~~~l~~~GNt~sasi~~~L~~~---~ 304 (333)
T 4dfe_A 234 NVLEKVAVEALEKANLSAEQIDWLIP----HQA--NIRIMQSTCRKLGLPQERMIVTVGEHGNTSAASIPLALDVA---V 304 (333)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEE----CCS--CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE----cCC--CHHHHHHHHHHhCCCHHHhhhhHHhcCchHHHHHHHHHHHH---H
Confidence 55667889999999999999998875 221 23445667888999754333333 33444444455443 4
Q ss_pred HcCCC---CEEEEEee
Q 012522 152 KAGLY---DIGIAAGL 164 (461)
Q Consensus 152 ~sG~~---d~vLv~G~ 164 (461)
+.|.. |.+|++|+
T Consensus 305 ~~g~~~~Gd~vll~~~ 320 (333)
T 4dfe_A 305 RDGRIKRGQNVLIEGV 320 (333)
T ss_dssp HTTCSCTTCEEEEEEE
T ss_pred HcCCCCCCCEEEEEEE
Confidence 44442 67887764
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=82.87 E-value=2.7 Score=40.70 Aligned_cols=81 Identities=12% Similarity=0.107 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATAI 151 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~~I 151 (461)
+...++++++|+++|++++|||.++.= .. ....-..++..+|+|.+.-..++ |..++|-..+|..+ +
T Consensus 224 ~~~~~~i~~~l~~~gl~~~did~~v~H----q~--~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~---~ 294 (323)
T 3il3_A 224 RELSNVVEETLLANNLDKKDLDWLVPH----QA--NLRIITATAKKLEMDMSQVVVTLDKYANNSAATVPVALDEA---I 294 (323)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCCEEEEC----CS--CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEc----CC--CHHHHHHHHHHcCcCHHHhhccHhhcCchHHHHHHHHHHHH---H
Confidence 345577889999999999999988752 21 23445677889999755433333 33444444455443 4
Q ss_pred HcCCC---CEEEEEeec
Q 012522 152 KAGLY---DIGIAAGLE 165 (461)
Q Consensus 152 ~sG~~---d~vLv~G~E 165 (461)
+.|.. |.+|.+|+-
T Consensus 295 ~~g~~~~Gd~vll~~~G 311 (323)
T 3il3_A 295 RDGRIQRGQLLLLEAFG 311 (323)
T ss_dssp HTTSSCTTCEEEEEEEE
T ss_pred HcCCCCCCCEEEEEEEe
Confidence 44432 678877653
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=82.63 E-value=1.8 Score=43.18 Aligned_cols=85 Identities=12% Similarity=0.128 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeE---Ee-CCCCchHHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR---TV-NRQCSSGLQAVADVATAI 151 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~---~v-~~~CaSgl~Al~~A~~~I 151 (461)
+-..++++++|+++|++++|||.++.-. . +...-..+...+|++...... .+ ..|..++...+..-...+
T Consensus 287 ~~~~~~i~~aL~~agl~~~dId~~~~H~----~--~~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~ 360 (393)
T 1ted_A 287 SGVAPVVTEMLWDNGLQISDIDLWAIHP----G--GPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMV 360 (393)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSCEEECC----S--CHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEECC----C--cHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHH
Confidence 4556788999999999999999887622 1 233445577789997543221 11 112222222222233455
Q ss_pred HcCCC----CEEEEEeecc
Q 012522 152 KAGLY----DIGIAAGLES 166 (461)
Q Consensus 152 ~sG~~----d~vLv~G~E~ 166 (461)
+.|.. |.+|++|+-.
T Consensus 361 ~~g~~~~~Gd~vll~~~G~ 379 (393)
T 1ted_A 361 QQAESAKAISTGVAFAFGP 379 (393)
T ss_dssp HSCSSSSSSEEEEEEEEET
T ss_pred hcCccCCCCCeEEEEEecc
Confidence 66654 7888877643
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=82.60 E-value=4.5 Score=38.61 Aligned_cols=77 Identities=18% Similarity=0.202 Sum_probs=50.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA-----FASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea-----fa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
..+++++|+++|++++|||.+.+-.. .+.......+.||+...+ ...+ +...++|+..+..+...++.
T Consensus 56 ~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~~~~------~~~v-~~aCas~~~al~~A~~~i~~ 128 (317)
T 1hnj_A 56 FEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCP------AFDV-AAACAGFTYALSVADQYVKS 128 (317)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSC------EEEE-CCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCe------EEee-CcccHHHHHHHHHHHHHHHC
Confidence 47899999999999999998654221 223445667788986433 1223 33345666667777777876
Q ss_pred cCCCCCEEEEE
Q 012522 412 RGKDCRFGVIS 422 (461)
Q Consensus 412 ~~~~~~~gl~~ 422 (461)
. ..++.|+.
T Consensus 129 g--~~~~vlv~ 137 (317)
T 1hnj_A 129 G--AVKYALVV 137 (317)
T ss_dssp T--SCSEEEEE
T ss_pred C--CCCEEEEE
Confidence 6 45555544
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=82.32 E-value=3.1 Score=41.44 Aligned_cols=44 Identities=18% Similarity=0.098 Sum_probs=33.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINE----AFASQYVYCIKKLGLDPEK 380 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihe----afa~~~~~~~e~LGl~~~~ 380 (461)
..|++++|+++|++++|||++.+-- .++.......+.||+....
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~ 154 (393)
T 3ov2_A 107 KEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTV 154 (393)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCc
Confidence 4789999999999999999987532 2344556677899997643
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=82.27 E-value=2.4 Score=41.65 Aligned_cols=83 Identities=10% Similarity=0.055 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHH--
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVAT-- 149 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~-- 149 (461)
+...++++++|+++|++++|||.++.= .. ....-..++..+|+|...-..++ |..++|-..+|..+..
T Consensus 244 ~~~~~~i~~~l~~~gl~~~did~~v~H----q~--~~~i~~~~~~~Lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g 317 (354)
T 4efi_A 244 NAVPKLVSRTLDIAGRDKDSYDAFLFH----QA--NLFMLKHLAKKAGLPAERVPVNIGEYGNTSCASIPLLITTELKDR 317 (354)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEEC----CC--CHHHHHHHHHHTTCCGGGSCCCHHHHCBCGGGHHHHHHHHHSHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEeC----CC--CHHHHHHHHHHhCcCHHHHHHHHhhhCcHHHHHHHHHHHHHHHhC
Confidence 455677889999999999999988762 21 23445668889999755433332 4555666667766543
Q ss_pred HHHcCCCCEEEEEeecc
Q 012522 150 AIKAGLYDIGIAAGLES 166 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~ 166 (461)
.++.| |.+|++|+-.
T Consensus 318 ~~~~G--d~vll~~fG~ 332 (354)
T 4efi_A 318 LKEET--LQLGMFGFGV 332 (354)
T ss_dssp HHHSC--EEEEEEEEET
T ss_pred CCCCC--CEEEEEEEch
Confidence 45666 6788777544
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=82.16 E-value=5 Score=39.88 Aligned_cols=78 Identities=13% Similarity=0.202 Sum_probs=53.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----hHHHHHHHHHcCCCCC-CcCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAF-----ASQYVYCIKKLGLDPE-KVNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheaf-----a~~~~~~~e~LGl~~~-~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..+++++|+++|++++|||.+.+-... ..........||++.. +. ..+ +...++++..+..+...++
T Consensus 34 ~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~------~~v-~~~Css~~~al~~A~~~I~ 106 (395)
T 4e1l_A 34 TIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPS------YTV-NKLCGSGLKSVQLAAQSIT 106 (395)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSCE------EEE-CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCceE------EEc-cccchHHHHHHHHHHHHHh
Confidence 479999999999999999998754321 2234456677898642 21 111 3445677777888888888
Q ss_pred ccCCCCCEEEEEe
Q 012522 411 RRGKDCRFGVISM 423 (461)
Q Consensus 411 ~~~~~~~~gl~~~ 423 (461)
.. ..++.|+..
T Consensus 107 ~G--~~~~vlv~g 117 (395)
T 4e1l_A 107 SG--ENDVVIAGG 117 (395)
T ss_dssp TT--SCSEEEEEE
T ss_pred CC--CCCEEEEEE
Confidence 76 677777653
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=81.01 E-value=4 Score=41.71 Aligned_cols=44 Identities=23% Similarity=0.152 Sum_probs=34.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA----FASQYVYCIKKLGLDPEK 380 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea----fa~~~~~~~e~LGl~~~~ 380 (461)
..|++++|+++|++++|||++.+.-+ ++.......+.||+....
T Consensus 115 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~ 162 (465)
T 3e1h_A 115 VEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRL 162 (465)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCCe
Confidence 47899999999999999999975432 445566778899997643
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=80.80 E-value=3.6 Score=40.84 Aligned_cols=76 Identities=17% Similarity=0.056 Sum_probs=46.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----ChHHHHHHHHHcCCCCCC--cCCCCCcccccCchhhHHHHHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA----FASQYVYCIKKLGLDPEK--VNVNGGAVALGHPLGATGARCVATLLSEMK 410 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea----fa~~~~~~~e~LGl~~~~--vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~ 410 (461)
..|++++|+++|++++|||++.+... ++.......+.||+...- ... + +...++|+..+..+...++
T Consensus 103 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~------v-~~aC~s~~~al~~A~~~i~ 175 (387)
T 3a5r_A 103 KEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMF------Y-HLGCYAGGTVLRLAKDIAE 175 (387)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTTCEEEEE------E-SCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCCcceeee------E-ccccHHHHHHHHHHHHHHH
Confidence 47899999999999999998875422 333456677889997531 111 1 1112344555555556666
Q ss_pred ccCCCCCEEEE
Q 012522 411 RRGKDCRFGVI 421 (461)
Q Consensus 411 ~~~~~~~~gl~ 421 (461)
.. ..+++|+
T Consensus 176 ~g--~~~~vLv 184 (387)
T 3a5r_A 176 NN--KGARVLI 184 (387)
T ss_dssp HS--TTCEEEE
T ss_pred hC--CCCEEEE
Confidence 54 3444443
|
| >2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha} | Back alignment and structure |
|---|
Probab=80.61 E-value=3.6 Score=41.27 Aligned_cols=43 Identities=23% Similarity=0.244 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINE----AFASQYVYCIKKLGLDPE 379 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihe----afa~~~~~~~e~LGl~~~ 379 (461)
..|++++|+++|++++|||++.+.. .++.......+.||++..
T Consensus 125 ~~Aa~~aL~~agl~~~dId~li~~t~~~~~~p~~a~~v~~~LGl~~~ 171 (413)
T 2p0u_A 125 KEASMNAIKEWGRPKSEITHIVMATTSGVNMPGAELATAKLLGLRPN 171 (413)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEecCCcccCcHHHHHHHHhCCCCC
Confidence 4789999999999999999987543 234455677788999753
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 461 | ||||
| d1m3ka1 | 268 | c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea | 2e-63 | |
| d1ulqa1 | 273 | c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {T | 8e-59 | |
| d1afwa1 | 269 | c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Sacch | 1e-52 | |
| d1wdkc1 | 262 | c.95.1.1 (C:2-263) Fatty oxidation complex beta su | 1e-48 | |
| d1m3ka2 | 124 | c.95.1.1 (A:269-392) Biosynthetic thiolase {Zooglo | 1e-43 | |
| d1afwa2 | 124 | c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Sacc | 3e-42 | |
| d1ulqa2 | 125 | c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase | 1e-38 | |
| d1wdkc2 | 128 | c.95.1.1 (C:264-391) Fatty oxidation complex beta | 1e-35 | |
| d1teda_ | 372 | c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte | 3e-04 |
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Score = 204 bits (520), Expect = 2e-63
Identities = 100/274 (36%), Positives = 146/274 (53%), Gaps = 18/274 (6%)
Query: 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
+VI +A RTA+ G F +T A +L A V+ AV+E+ + EV ++++G VL G
Sbjct: 3 PSIVIASAARTAVGSFN-GAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAG 61
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
R AA AG P+ +N+ SGL+AVA I G I +A G+ESM+
Sbjct: 62 EG-QNPARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMS 120
Query: 169 VNSISVVGQVNPKVEIFTQARDCL----------LPMGITSENVAQRFGVTRQEQDLAAV 218
+ + K+ F + MG T+ENVA+++ ++R EQD AV
Sbjct: 121 MAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAV 180
Query: 219 ESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278
S +A AA G+FKDEI+P K G + +T+ D+ IR T+ +AKL+PA
Sbjct: 181 ASQNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPA 234
Query: 279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKG 312
F K+GT TAGNAS ++DGA A LLM + A ++G
Sbjct: 235 FDKEGTVTAGNASGLNDGAAAALLMSEAEASRRG 268
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Score = 192 bits (489), Expect = 8e-59
Identities = 103/280 (36%), Positives = 143/280 (51%), Gaps = 23/280 (8%)
Query: 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
+ IV A RT I K G DDLLA L +++++ + EV D+ G G
Sbjct: 1 EAWIVEAVRTPIGKHG-GALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGE 59
Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
RMA AGFP V TVNR C SGL+AVA A AI AG + I +G+ESM+
Sbjct: 60 DNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR 119
Query: 170 NSISVVGQVNPK----------------VEIFTQARDCLLPMGITSENVAQRFGVTRQEQ 213
+V V QA MG T+EN+A+ +G+ R+EQ
Sbjct: 120 APYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQ 179
Query: 214 DLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA 273
D A+ SH++A A G+F+DE++PV K + VE+ D+G R +T++ LA
Sbjct: 180 DRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQ------DEGPRRDTSLEKLA 233
Query: 274 KLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGL 313
L+P F++ GT TAGN+S ++DGA AVLL+ A GL
Sbjct: 234 ALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGL 273
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 175 bits (445), Expect = 1e-52
Identities = 115/268 (42%), Positives = 156/268 (58%), Gaps = 18/268 (6%)
Query: 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK----TRLNPSEVGDIVVGTV 104
+DVVIVAA R+AI K +G FKD D LL L I + R + + + ++ G V
Sbjct: 10 EDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNV 69
Query: 105 LAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGL 164
L A E R A +G P + P +NRQCSSGL AV D+A IK G DIG+A G+
Sbjct: 70 L-NVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGV 128
Query: 165 ESMTVNSISVV---GQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESH 221
ESMT N +V + +++ +A+ CL+PMGIT+ENVA F ++R++QD A S+
Sbjct: 129 ESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSY 188
Query: 222 RRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281
++A A G F+DEI+P+ + D+G RPN T L+ ++PAF K
Sbjct: 189 QKAYKAKNEGLFEDEILPIK---------LPDGSICQSDEGPRPNVTAESLSSIRPAFIK 239
Query: 282 D-GTTTAGNASQVSDGAGAVLLMKRSLA 308
D GTTTAGNASQVSDG VLL +RS+A
Sbjct: 240 DRGTTTAGNASQVSDGVAGVLLARRSVA 267
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Score = 165 bits (419), Expect = 1e-48
Identities = 94/262 (35%), Positives = 144/262 (54%), Gaps = 9/262 (3%)
Query: 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAP 107
DVVIV RT + ++K G ++T A+D+ A ++ V+E+ ++++P EV D++ G V
Sbjct: 5 RDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQT 64
Query: 108 GSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167
RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M
Sbjct: 65 LEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM 124
Query: 168 TVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAA 227
+S++ V+P + A MG+T+E + + G++R++QD AV SH+ A A
Sbjct: 125 GH--VSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKA 182
Query: 228 TASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK-KDGTTT 286
T GKFKDEIIP+ + D+ IRP+TT+ LA LKPAF K GT T
Sbjct: 183 TVEGKFKDEIIPMQGYDENGFL-----KIFDYDETIRPDTTLESLAALKPAFNPKGGTVT 237
Query: 287 AGNASQVSDGAGAVLLMKRSLA 308
AG +SQ++DGA +++M A
Sbjct: 238 AGTSSQITDGASCMIVMSAQRA 259
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Score = 147 bits (372), Expect = 1e-43
Identities = 67/122 (54%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Query: 316 LGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLG 375
LG S++ VGVDP VMG GP A A++ AG +I D++L E NEAFA+Q K LG
Sbjct: 4 LGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLG 63
Query: 376 LDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVF 435
DP VNVNGGA+A+GHP+GA+GAR + TLL EMKRRG R G+ ++CIG GMG A
Sbjct: 64 WDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGA--RKGLATLCIGGGMGVAMCI 121
Query: 436 ER 437
E
Sbjct: 122 ES 123
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 143 bits (363), Expect = 3e-42
Identities = 75/126 (59%), Positives = 97/126 (76%), Gaps = 4/126 (3%)
Query: 312 GLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCI 371
LP+LG + F VGV P +MG+GPA AIP +++ GLQ+ DI++FEINEAFA+Q +YCI
Sbjct: 2 NLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCI 61
Query: 372 KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGA 431
KLG+D KVN GGA+ALGHPLG TGAR VAT+L E+K+ + GV+SMCIG+GMGA
Sbjct: 62 HKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKD----QIGVVSMCIGTGMGA 117
Query: 432 AAVFER 437
AA+F +
Sbjct: 118 AAIFIK 123
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 125 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Score = 134 bits (338), Expect = 1e-38
Identities = 58/124 (46%), Positives = 83/124 (66%), Gaps = 4/124 (3%)
Query: 316 LGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKK-- 373
L R+ + GV P +MGIGP A A++ AGL D+ L E+NEAFA+Q + +++
Sbjct: 3 LARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWS 62
Query: 374 LGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAA 433
L ++ +++N NGGA+ALGHPLGA+GAR + TL+ EM+RR +FG+ +MCIG G G A
Sbjct: 63 LSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKV--QFGLATMCIGVGQGIAV 120
Query: 434 VFER 437
V E
Sbjct: 121 VVEG 124
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 128 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Score = 126 bits (318), Expect = 1e-35
Identities = 66/129 (51%), Positives = 84/129 (65%), Gaps = 5/129 (3%)
Query: 312 GLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCI 371
GL L V RS + GVDP++MG GP A A+K AGL + DI+ E+NEAFA+Q + +
Sbjct: 1 GLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVL 60
Query: 372 K---KLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSG 428
K L EKVN++GGA+ALGHP G +GAR TLL+ MK+ G FG+ +MCIG G
Sbjct: 61 KDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGG--TFGLSTMCIGLG 118
Query: 429 MGAAAVFER 437
G A VFER
Sbjct: 119 QGIATVFER 127
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 40.6 bits (94), Expect = 3e-04
Identities = 18/103 (17%), Positives = 38/103 (36%), Gaps = 6/103 (5%)
Query: 337 AVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGA 396
A + + GLQI DI+L+ I+ ++ LG+ E + + G
Sbjct: 269 APVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQS---WDVLARFGN 325
Query: 397 TGARCVATLLSEMKRRGKDCRFGVISMCIGSGMG---AAAVFE 436
+ + +L M ++ + + + G G +F+
Sbjct: 326 MLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFD 368
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 461 | |||
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 100.0 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 100.0 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 100.0 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 100.0 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.97 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 99.97 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.97 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.97 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 99.86 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.67 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.66 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 99.64 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 99.64 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.62 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.57 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 99.54 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 99.54 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.54 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 99.53 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 99.45 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 99.43 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 99.37 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 99.28 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 99.14 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 99.0 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 98.93 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.93 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 98.89 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 98.87 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.85 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 98.77 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 98.53 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 98.42 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 98.36 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 98.35 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 98.28 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 98.12 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 97.67 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 97.59 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 97.55 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 94.63 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 93.97 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 92.85 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 92.4 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 91.47 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 91.1 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 90.76 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 89.44 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 87.48 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 86.21 | |
| d1xpma2 | 221 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 84.79 | |
| d1okja1 | 106 | Hypothetical protein YeaZ {Escherichia coli [TaxId | 81.68 | |
| d2a6aa1 | 103 | Hypothetical protein TM0874 {Thermotoga maritima [ | 80.92 |
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=1.3e-50 Score=388.78 Aligned_cols=260 Identities=36% Similarity=0.476 Sum_probs=231.9
Q ss_pred CCCCCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcC
Q 012522 45 PAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAG 123 (461)
Q Consensus 45 ~~~~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~-agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lG 123 (461)
.|++++|||||+.||||+|.++|.+++.++.||+..+++++|++ +||+|++||.|++|++.+...++++++|.+++..|
T Consensus 1 ~~n~r~v~Iv~a~RTP~g~~~gg~~~~~~~~dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g~n~aR~~al~ag 80 (262)
T d1wdkc1 1 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQ 80 (262)
T ss_dssp CCCTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSS
T ss_pred CCCCCcEEEEeeeeCceeCCCCccccCCCHHHHHHHHHHHHHHhcCCCCHHHeeEEEEEeecccccccccchhhhHhhhh
Confidence 37899999999999999996667899999999999999999996 89999999999999998876558899999999999
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA 203 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 203 (461)
+|..+|+++|+++|+||++||..|++.|++|++|++|++|+|+||+.|+..+..... .....+......||+++|+++
T Consensus 81 ~p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~~p~~~~~~~~~--~~~~~~~~~~~~mg~tae~~a 158 (262)
T d1wdkc1 81 IPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNP--HMSLYAAKASGMMGLTAEMLG 158 (262)
T ss_dssp SCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCG--GGGGTSCGGGGSHHHHHHHHH
T ss_pred cccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeecccccccccccccccccc--cccccccccccchhhhHHHHH
Confidence 999999999999999999999999999999999999999999999988754322111 111223344567999999999
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCC-C
Q 012522 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-D 282 (461)
Q Consensus 204 ~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~-~ 282 (461)
++||++||++|+|++.||++|.++.+.|+|++||+|+.++.++. ...+++.||++|+++|+|+|.++||+|++ +
T Consensus 159 ~~~gisRe~~D~~a~~S~~ra~~A~~~G~f~~ei~pv~~~~~~~-----~~~~~~~De~~R~~tt~E~La~LkP~f~~~~ 233 (262)
T d1wdkc1 159 KMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENG-----FLKIFDYDETIRPDTTLESLAALKPAFNPKG 233 (262)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTC-----CEEEECSCTTCCTTCCHHHHHTSCCSSCTTT
T ss_pred HHhccccccchhhhhhhhhhhhhHhhcCCcceeeeeeccccccc-----cccccccccCCCCCCCHHHHcCCCCcccCCC
Confidence 99999999999999999999999999999999999998865432 23568899999999999999999999986 7
Q ss_pred CccccCCCCcccccceEEEEcchhHHHhc
Q 012522 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQK 311 (461)
Q Consensus 283 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~ 311 (461)
|++|.+|+|+++|||+|+||++++.|+++
T Consensus 234 GtvTagnsS~isDGAAavll~se~~akeL 262 (262)
T d1wdkc1 234 GTVTAGTSSQITDGASCMIVMSAQRAKDL 262 (262)
T ss_dssp CCCCGGGBCCCEEEEEEEEEEEHHHHHHT
T ss_pred CcCcchhhChHHHHHHHHHHhCHHHHhcC
Confidence 99999999999999999999999999875
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2e-50 Score=388.73 Aligned_cols=253 Identities=46% Similarity=0.658 Sum_probs=228.0
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHc----CCCcCCcCeEEEEeecCCCCccchHHHHHHHHcC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT----RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAG 123 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~a----gl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lG 123 (461)
++|||||++.||||+|+++|.|++.++.+|+..+++++|+++ +++|++||.|++|++.+... +.+++|++++..|
T Consensus 9 ~~dvvIv~a~RTP~gr~~~G~l~~~~~~~L~~~~i~~~l~r~~~~~~idp~~Id~vi~G~v~~~g~-~~~~aR~~al~ag 87 (269)
T d1afwa1 9 PEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGA-GATEHRAACLASG 87 (269)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGG-GHHHHHHHHHHTT
T ss_pred CCCEEEEcceeCcceeCCCCCCCCCCHHHHHHHHHHHHHHhCCccccCChhhcCEEEecccccccc-ccccchhhhhhcc
Confidence 899999999999999978899999999999999999999864 69999999999999988765 7899999999999
Q ss_pred CCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccccc---CCChhhhhhhcccccCccHHHHHH
Q 012522 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG---QVNPKVEIFTQARDCLLPMGITSE 200 (461)
Q Consensus 124 l~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~a~ 200 (461)
+|..+|+++|++.|+||++||..|++.|++|++|++|++|+|+||+.|..... .....+......+++..+|+.++|
T Consensus 88 lp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~tAe 167 (269)
T d1afwa1 88 IPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNE 167 (269)
T ss_dssp CCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHHHHH
T ss_pred ccccccchhccccchHHHHHHHHHHHHHhhccccceeeeecccccccccccccccccccchhcccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999997764322 122333334455677789999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCC
Q 012522 201 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280 (461)
Q Consensus 201 ~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~ 280 (461)
+++++||||||+||+|++.||++|.++++.|+|.+||+|++.+. ..+++.||++|+.+|+|+|.++||+|.
T Consensus 168 ~~a~~~~isRee~D~~a~~S~~rA~~A~~~g~f~~eivpv~~~~---------~~~~~~De~~R~~tt~E~La~L~P~f~ 238 (269)
T d1afwa1 168 NVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD---------GSICQSDEGPRPNVTAESLSSIRPAFI 238 (269)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT---------SCEECSCSSCCSCCCHHHHHHCCBSCC
T ss_pred cchhhcCccHHHHhhHHHHHHHHHHHHHhcCCcceEecceeccc---------ccEEecCCCcCCCCCHHHHcCCCCccC
Confidence 99999999999999999999999999999999999999998742 247899999999999999999999997
Q ss_pred C-CCccccCCCCcccccceEEEEcchhHHHh
Q 012522 281 K-DGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 281 ~-~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
+ +|++|.+|+|+++|||+|+||++++.|++
T Consensus 239 ~~~G~vTagnsS~~sDGAAavll~se~~A~e 269 (269)
T d1afwa1 239 KDRGTTTAGNASQVSDGVAGVLLARRSVANQ 269 (269)
T ss_dssp ---CCCBTTTBCCBEEEEEEEEEEEHHHHHH
T ss_pred CCCCeEcchhcChHHHHHHHHHHhhHHHhcC
Confidence 6 59999999999999999999999999875
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=100.00 E-value=1.2e-49 Score=383.63 Aligned_cols=257 Identities=38% Similarity=0.513 Sum_probs=231.1
Q ss_pred CCcEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCC
Q 012522 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (461)
Q Consensus 48 ~~~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~ 127 (461)
..+||||++.||||+| ++|.|++.++.||+..+++++|+++||+|++||.|++|++.+... +++++|++++..|+|..
T Consensus 2 ~~~V~Iv~~~RTP~g~-~~G~l~~~~~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~-~~n~ar~~al~aglp~~ 79 (268)
T d1m3ka1 2 TPSIVIASAARTAVGS-FNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE-GQNPARQAAMKAGVPQE 79 (268)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCCEEEEeceeCcccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCc-chHHHhHHHHHhCCccc
Confidence 4589999999999998 789999999999999999999999999999999999999988775 88999999999999989
Q ss_pred CCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccccc----CCCh------hhhhhhcccccCccHHH
Q 012522 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG----QVNP------KVEIFTQARDCLLPMGI 197 (461)
Q Consensus 128 ~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~~~----~~~~------~~~~~~~~~~~~~~~g~ 197 (461)
+|+++|++.|+||++||.+|++.|++|++|++|++|+|+||+.|+.... ...+ .+.....++.....|+.
T Consensus 80 vpa~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~Mg~ 159 (268)
T d1m3ka1 80 ATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGT 159 (268)
T ss_dssp SEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCSSCCSSSCEEEEEHHHHHHTBCTTTCSBHHH
T ss_pred ccceeecccCcccchHHHHHHHHHhCCCceEEeeccccccccCchhhhcccCCcCCCcccccccccccCcCcccCCcHHH
Confidence 9999999999999999999999999999999999999999998874321 1111 11112233445578999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCC
Q 012522 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (461)
Q Consensus 198 ~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~p 277 (461)
++|+++++||||||+||+|++.||++|..+.+.|+|++||+|+..+.++ ++.+++.||.+|+.+|+|+|.++||
T Consensus 160 ~Ae~~A~~~gisRe~~D~~A~~S~~ra~~A~~~g~f~~ei~p~~~~~~~------g~~~v~~d~~~r~~tt~e~L~~L~p 233 (268)
T d1m3ka1 160 TAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRK------GDITVDADEYIRHGATLDSMAKLRP 233 (268)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTT------CCEEECSCSSCCTTCCHHHHHTCCB
T ss_pred HHHHHHHHHCcCHHHHHHHHHHHHHHhhhHHHcCCchhhccccccCCCC------CCeEEeCCCCCCCCCCHHHHcCCCC
Confidence 9999999999999999999999999999999999999999999875432 2467999999999999999999999
Q ss_pred CCCCCCccccCCCCcccccceEEEEcchhHHHhcC
Q 012522 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKG 312 (461)
Q Consensus 278 vf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g 312 (461)
+|+++|++|.+|+|+++|||+|+||++++.++++|
T Consensus 234 ~f~~~GtvTagnss~~~DGAAa~ll~se~~a~~~G 268 (268)
T d1m3ka1 234 AFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRG 268 (268)
T ss_dssp SSCTTCCCBSSSBCCCEEEEEEEEEEEHHHHHHHT
T ss_pred CcCCCCcEEChhhChHHHHHHHHHHhhHHHHHhcC
Confidence 99999999999999999999999999999999876
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.6e-49 Score=383.01 Aligned_cols=257 Identities=39% Similarity=0.541 Sum_probs=229.0
Q ss_pred cEEEEeeeeccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCC
Q 012522 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP 129 (461)
Q Consensus 50 ~v~Ivg~~~Tp~~r~~~G~~~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~ 129 (461)
++|||++.||||+| ++|.|++.++.||+..+++++|+++||+|++||.|++|++.+...++.+++|++++..|+|..+|
T Consensus 1 ~a~Iv~~~RTPfgk-~~G~l~~~~~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp 79 (273)
T d1ulqa1 1 EAWIVEAVRTPIGK-HGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVA 79 (273)
T ss_dssp CEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCE
T ss_pred CEEEEccccCcccc-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCccc
Confidence 68999999999999 68999999999999999999999999999999999999998876557899999999999999999
Q ss_pred eEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccccccccc-----ccCCChh-----------hhhhhcccccCc
Q 012522 130 LRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQVNPK-----------VEIFTQARDCLL 193 (461)
Q Consensus 130 ~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~~~~~~-----~~~~~~~-----------~~~~~~~~~~~~ 193 (461)
.++|+++|+||++||.+|++.|++|.+|++|++|+|+||+.|+.. +..++.. +...........
T Consensus 80 ~~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (273)
T d1ulqa1 80 GCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTE 159 (273)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCC
T ss_pred eEEEecccchHHHHHHHHHHHHhcCCCccceeeeccccchhhhccccccccccCCCcccccccccccccchhhhcccccc
Confidence 999999999999999999999999999999999999999988742 1111110 001111234556
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhCCCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHh
Q 012522 194 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA 273 (461)
Q Consensus 194 ~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~ 273 (461)
.|+.++|+++++||||||+||+|++++|++|..+.++|+|.+||+|+..... .+..+++.||.+|+.+|+|+|.
T Consensus 160 ~m~~~ae~~a~~~~itRe~~D~~a~~S~~ra~~A~~~g~f~~eivp~~~~~~------~~~~~v~~d~~~r~~tt~e~La 233 (273)
T d1ulqa1 160 SMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRG------KEEILVEQDEGPRRDTSLEKLA 233 (273)
T ss_dssp CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEET------TEEEEECSCSCCCTTCCHHHHH
T ss_pred chHHHHHHHHhhcCCCHHHHHHHHhhHHHHHHHHHHcCCcceeeeeeccccc------cCceEEeCCCCcCCCCCHHHHc
Confidence 8999999999999999999999999999999999999999999999976432 2346789999999999999999
Q ss_pred ccCCCCCCCCccccCCCCcccccceEEEEcchhHHHhcCC
Q 012522 274 KLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGL 313 (461)
Q Consensus 274 ~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~ 313 (461)
++||+|+++|++|.+|||+++|||+|+||++++.|+++|+
T Consensus 234 ~L~p~f~~~G~vTagnss~~sDGAAa~vl~se~~a~~lGL 273 (273)
T d1ulqa1 234 ALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGL 273 (273)
T ss_dssp HSCBSSSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTC
T ss_pred cCCCCcCCCCcEEchhhchHHHHHHHHHHccHHHHHHcCC
Confidence 9999999999999999999999999999999999999985
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.97 E-value=1.5e-32 Score=228.96 Aligned_cols=123 Identities=54% Similarity=0.854 Sum_probs=120.6
Q ss_pred CCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccC
Q 012522 313 LPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGH 392 (461)
Q Consensus 313 ~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Gh 392 (461)
++|+++|+++...+.+|..|+.+|..+++++|+++|++++|||+||+||+|+.+.+.+.++|+++++++|++||.+++||
T Consensus 1 L~Plari~~~a~~g~dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~EinEAFA~q~la~~~~l~id~~kvN~~GGaiAlGH 80 (124)
T d1m3ka2 1 IQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGH 80 (124)
T ss_dssp CCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCC
T ss_pred CCcEEEEEEEEEEecChHHhccchHHHHHHHHHHcCCChhcccHHHhcccchhheeeehHhhCCChhhcCCCCCcccccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 393 PLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 393 p~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
|+||||++.+.+++++|+++ +.++|++++|+|||+|.|++||+
T Consensus 81 P~GaSGarl~~tl~~~L~~~--~~~~Glas~C~gGG~g~A~liE~ 123 (124)
T d1m3ka2 81 PIGASGARILNTLLFEMKRR--GARKGLATLCIGGGMGVAMCIES 123 (124)
T ss_dssp CTTTHHHHHHHHHHHHHHHH--TCSEEEEEEEETTTEEEEEEEEC
T ss_pred CcCccchhHHHHHHHHHHhc--CCCEEEEEecccccceeEEEEEe
Confidence 99999999999999999999 99999999999999999999997
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=1.9e-32 Score=228.72 Aligned_cols=124 Identities=60% Similarity=1.071 Sum_probs=120.1
Q ss_pred cCCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccc
Q 012522 311 KGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVAL 390 (461)
Q Consensus 311 ~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~ 390 (461)
+|++|+++|++++..+.+|..|+.+|..+++++|+++|++++|||+||+||+|+.+.+.+.++|+++++++|++||.+++
T Consensus 1 Lgl~plAri~~~a~~g~~P~~m~~gPv~Ai~klL~r~gl~~~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~GGaiAl 80 (124)
T d1afwa2 1 LNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIAL 80 (124)
T ss_dssp TTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHH
T ss_pred CCCcEEEEEEEEEEEecCHHHhhhChHHHHHHHHHHcCCCcccCcEEEeccchhHHHHHHHHHcCCChhhccccCcccee
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEEc
Q 012522 391 GHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 391 Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
|||+||||++.+++++++|++ .++|++++|+|||+|.|++|||+
T Consensus 81 GHP~GaSGarlv~~l~~~L~~----~~~glas~C~ggG~G~a~~ier~ 124 (124)
T d1afwa2 81 GHPLGCTGARQVATILRELKK----DQIGVVSMCIGTGMGAAAIFIKE 124 (124)
T ss_dssp CBCTTTHHHHHHHHHHHHSCT----TCEEEEEEEETTTEEEEEEEEEC
T ss_pred cCCcCCchHHHHHHHHHHhcc----CCEEEEEEcccCCcEEEEEEEeC
Confidence 999999999999999999975 37999999999999999999985
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.97 E-value=7.1e-32 Score=225.22 Aligned_cols=122 Identities=48% Similarity=0.843 Sum_probs=118.2
Q ss_pred CeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHH--cCCCCCCcCCCCCccccc
Q 012522 314 PILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKK--LGLDPEKVNVNGGAVALG 391 (461)
Q Consensus 314 ~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~--LGl~~~~vn~~GG~~~~G 391 (461)
+|+++|+++...+.+|..|+.+|..+++++|+++|++++|||+||+||+|+.+.+.++++ |+++++++|++||.+++|
T Consensus 1 KPlA~i~~~~~~g~~P~~~~~~P~~A~~~~L~r~gl~~~Did~~EinEAFAaq~l~~~~~~~l~~d~~kvN~~GGaIAlG 80 (125)
T d1ulqa2 1 RPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALG 80 (125)
T ss_dssp CCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHC
T ss_pred CCeEEEEEEEEEecCHHHHhhccHHHHHhHhhccCcCccccchheeccccchhHHHHHHHhhccCchhhcCCCCCccccc
Confidence 588999999999999999999999999999999999999999999999999999999998 666888999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 392 HPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 392 hp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
||+||||++++++++++|+++ +.++|++++|+|||+|.|+++||
T Consensus 81 HP~GASGari~~tl~~~L~~~--~~~~G~as~C~gGG~g~A~~iE~ 124 (125)
T d1ulqa2 81 HPLGASGARILTTLVHEMRRR--KVQFGLATMCIGVGQGIAVVVEG 124 (125)
T ss_dssp CCHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEETTTEEEEEEEEE
T ss_pred CCccccchhHHHHHHHHHHhc--CCCEEEEEecccccceeEEEEEe
Confidence 999999999999999999999 99999999999999999999997
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.97 E-value=2.7e-31 Score=222.92 Aligned_cols=124 Identities=52% Similarity=0.863 Sum_probs=119.4
Q ss_pred CCCeeEEEEEeeeeccCCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCC---CCCCcCCCCCcc
Q 012522 312 GLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAV 388 (461)
Q Consensus 312 g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl---~~~~vn~~GG~~ 388 (461)
|++|+++|++++..+.+|..|+.+|..+++++|+++|++++|||+||+||+|+.+.+.+.+++++ +.+|+|++||.+
T Consensus 1 Gl~pla~i~~~~~~g~dP~~mg~~p~~A~~klL~ragl~~~did~~EinEAFA~q~l~~~~~~~~~~~~~ekvN~~GGai 80 (128)
T d1wdkc2 1 GLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAI 80 (128)
T ss_dssp TCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHH
T ss_pred CCCEEEEEEEEEEEecCHHHhccCcHHHHHHHhhhcCccccccceEEeecccchhhhhhhhhcccccCCcceecCCCCcc
Confidence 57899999999999999999999999999999999999999999999999999999999999876 347999999999
Q ss_pred cccCchhhHHHHHHHHHHHHHHccCCCCCEEEEEecccCcceeEEEEEE
Q 012522 389 ALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 389 ~~Ghp~gatG~~~~~~~~~~L~~~~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
++|||+||||++.+.+++++|+++ +.++|++++|+|||+|.|++|||
T Consensus 81 AlGHP~GASGaRlv~~l~~~L~~~--~~~~Glas~C~gGG~g~A~~iEr 127 (128)
T d1wdkc2 81 ALGHPFGCSGARISGTLLNVMKQN--GGTFGLSTMCIGLGQGIATVFER 127 (128)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEETTTEEEEEEEEC
T ss_pred cccccccccchhHHHHHHHHHHhc--CCCEEEEEecccccceeEEEEEe
Confidence 999999999999999999999999 99999999999999999999997
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.86 E-value=5.2e-21 Score=191.78 Aligned_cols=252 Identities=20% Similarity=0.230 Sum_probs=170.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeC-CCCchHHHHHHHHHHH
Q 012522 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATA 150 (461)
Q Consensus 72 ~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~CaSgl~Al~~A~~~ 150 (461)
++..+|+.+|+++||+++|++|+|||.||+++++ ++. .|..+.+++..||++..+..+.++ .+|+++++||..|..+
T Consensus 90 e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~-~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~ 167 (372)
T d1teda_ 90 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATST-GFI-APGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNY 167 (372)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESS-CCC-SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccC-CCC-CchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHH
Confidence 3567899999999999999999999999999876 444 678899999999997666667775 5899999999999999
Q ss_pred HHcCCCCEEEEEeeccccccccccccCCChhhhhhhcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhC
Q 012522 151 IKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATAS 230 (461)
Q Consensus 151 I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~~~~~A~~a~~a 230 (461)
|++|..+.+||+++|.+|....
T Consensus 168 l~sg~~~~~LVV~~E~~s~~~~---------------------------------------------------------- 189 (372)
T d1teda_ 168 VRAHPAMKALVVCIELCSVNAV---------------------------------------------------------- 189 (372)
T ss_dssp HHHSTTCEEEEEEEEECGGGCC----------------------------------------------------------
T ss_pred HhcCCCccceeeeehhhccccc----------------------------------------------------------
Confidence 9999999999999998875110
Q ss_pred CCCccccccccccccCCCCCcccceeeeccCCCCCCCCHHHHhccCCCCCCCCccccCCCCcccccceEEEEcchhHHHh
Q 012522 231 GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQ 310 (461)
Q Consensus 231 g~~~~ei~p~~~~~~~~~~~~~~~~~v~~de~~r~~~t~e~l~~~~pvf~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 310 (461)
+. | ..++.. .. .+ +||||+|+||...+....
T Consensus 190 --~~-------------------------d-------~~~~~~-~~-------~l-------fGDGAaA~ll~~~~~~~~ 220 (372)
T d1teda_ 190 --FA-------------------------D-------DINDVV-IH-------SL-------FGDGCAALVIGASQVQEK 220 (372)
T ss_dssp --CC-------------------------S-------SHHHHH-HH-------HH-------BCEEEEEEEEEEECTTSC
T ss_pred --CC-------------------------C-------cchhhh-hh-------hh-------hcccceeEEeccCCcccc
Confidence 00 0 000000 00 12 799999999987654322
Q ss_pred cCCCeeEEEEEeeeecc-C----------CC----CCC--------CcHHHHHHHHHHHcCCCCCCccEEEecCCChHHH
Q 012522 311 KGLPILGVFRSFSAVGV-D----------PS----VMG--------IGPAVAIPAAVKSAGLQIDDINLFEINEAFASQY 367 (461)
Q Consensus 311 ~g~~~~a~i~g~~~~~~-~----------p~----~~~--------~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~~ 367 (461)
..... ..+.+...... + .. ..+ ......++++|+++|++++|||+|.+|+++..+.
T Consensus 221 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~i~Hq~~~~i~ 299 (372)
T d1teda_ 221 LEPGK-VVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKII 299 (372)
T ss_dssp CCTTC-EEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHH
T ss_pred cCCce-eEEecccccccCCCccccccCCCCCcceeechHHHHHHHHHHHHHHHHHHHHhcCCCHHHhhhhhccCccHHHH
Confidence 21111 12222111100 0 00 001 1134788999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCcCCCCC-cccccCchhhHHHHHHHHHHHHHHcc---CCCCCEEEEEecccCccee-EEEEEEc
Q 012522 368 VYCIKKLGLDPEKVNVNGG-AVALGHPLGATGARCVATLLSEMKRR---GKDCRFGVISMCIGSGMGA-AAVFERG 438 (461)
Q Consensus 368 ~~~~e~LGl~~~~vn~~GG-~~~~Ghp~gatG~~~~~~~~~~L~~~---~~~~~~gl~~~~~g~G~g~-A~v~~~~ 438 (461)
....+.||++.+++..+=- .--+||..++|- ..++.++..+ .++.+++++... |.|+.+ ++||+..
T Consensus 300 ~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasi----p~~L~~~l~~g~~~~g~d~vll~~f-G~G~s~~~~ll~~~ 370 (372)
T d1teda_ 300 EQSVRSLGISAELAAQSWDVLARFGNMLSVSL----IFVLETMVQQAESAKAISTGVAFAF-GPGVTVEGMLFDII 370 (372)
T ss_dssp HHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHH----HHHHHHHHHSCSSSSSSEEEEEEEE-ETTTEEEEEEEEEC
T ss_pred HHHHHHcCCCHHHhhhhHHHHhccCCcHHHHH----HHHHHHHHHhCCCCCCCCEEEEEEE-cHHHhHHHHhheee
Confidence 9999999999988632110 123577766653 3344443332 234456665543 556554 5666643
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.66 E-value=2.5e-16 Score=140.54 Aligned_cols=98 Identities=16% Similarity=0.179 Sum_probs=93.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
++.++.+|+.+|+++||++++++|++||.|++++.++++. .|..+..++..||++ +.++++++.+|+++++||..|..
T Consensus 47 ~~~~~~~la~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~-~P~~a~~v~~~Lgl~-~~~~~di~~~C~g~~~al~~A~~ 124 (174)
T d1hnja1 47 PNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHA-FPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSVADQ 124 (174)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHHTCC-SSCEEEECCGGGHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHhhhhcccccccccEEEEecCCcccc-ccchhhhhhhccCCC-chhhhhhhhhhccHHHHHHHHHH
Confidence 5788999999999999999999999999999999999887 788999999999996 68999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccc
Q 012522 150 AIKAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~ 169 (461)
+|++|.++.+|++++|.+|.
T Consensus 125 ~i~sg~~~~~Lvv~~e~~S~ 144 (174)
T d1hnja1 125 YVKSGAVKYALVVGSDVLAR 144 (174)
T ss_dssp HHHTTSCSEEEEEEEECHHH
T ss_pred HHhcCCcceeEEEeeehhhc
Confidence 99999999999999999876
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.64 E-value=6.9e-16 Score=138.42 Aligned_cols=98 Identities=17% Similarity=0.127 Sum_probs=92.4
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
+++++.+|+.+|+++||++++++|++||.|++++.+++.. .+..+..++..+|.+ ++.+++++.+|+++++||..|..
T Consensus 54 ~~e~~~~ma~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~-~p~~a~~v~~~l~~~-~~~~~Dv~~~C~g~~~aL~~A~~ 131 (181)
T d1mzja1 54 PDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVH-TPPLSVAIAHELGAD-NAGGFDLSAACAGFCHALSIAAD 131 (181)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCC-SSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHH
T ss_pred cCCcHHHHhHHHHHhhhhhccCChhHCeEEEEeccCCccc-cccHHHHHHHhhcCC-CccceeHHhhhccHHHHHHHHhC
Confidence 6889999999999999999999999999999999998887 788889999999985 68999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccc
Q 012522 150 AIKAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~ 169 (461)
+|++|.++.+|++++|.+|.
T Consensus 132 ~i~~~~~~~~LvV~~e~~s~ 151 (181)
T d1mzja1 132 AVESGGSRHVLVVATERMTD 151 (181)
T ss_dssp HHHHSSCSCEEEEEEEEGGG
T ss_pred HhhcCCCceeEEeeeccccc
Confidence 99999999999999999876
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.62 E-value=8.7e-16 Score=136.64 Aligned_cols=97 Identities=16% Similarity=0.198 Sum_probs=91.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
++++..+|+.+|+++||+++|++|+|||.|++++.++++. .|..+..++..||. ++.+++++.+|++++.+|..|..
T Consensus 45 ~~e~~~~ma~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~-~p~~a~~v~~~Lg~--~~~~~di~~~C~g~~~al~~a~~ 121 (172)
T d1ub7a1 45 EDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDAL-FPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHA 121 (172)
T ss_dssp TTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEE-ESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHhhcCcccccceEEEEeccccccc-ccchHHHHHHHhcc--CccceeehhccccHHHHHHHHhh
Confidence 5788999999999999999999999999999999988876 78888899999996 57899999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccc
Q 012522 150 AIKAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~ 169 (461)
++++|.++.+|++++|.+|.
T Consensus 122 ~~~~~~~~~~Lvv~~e~~S~ 141 (172)
T d1ub7a1 122 LVEAGLAQKVLAVGAEALSK 141 (172)
T ss_dssp HHHTTSCSEEEEEEEECGGG
T ss_pred hhhcCCcceeEEeccccccc
Confidence 99999999999999999886
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.57 E-value=3e-14 Score=128.92 Aligned_cols=154 Identities=21% Similarity=0.217 Sum_probs=120.0
Q ss_pred ccCCCCCC--CCccccCCCCcccccceEEEEcchhHHHhcCC-CeeEEEEEeeeeccCC--CCCCCcHHHHHHHHHHHcC
Q 012522 274 KLKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGL-PILGVFRSFSAVGVDP--SVMGIGPAVAIPAAVKSAG 348 (461)
Q Consensus 274 ~~~pvf~~--~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~-~~~a~i~g~~~~~~~p--~~~~~~~~~ai~~aL~~AG 348 (461)
.+|| ||. ||++ ++||++++||++.+.|+++|. ++++.+.+++...... ...+.+..++++++|+++|
T Consensus 5 ~~rP-FD~~a~G~~-------~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~~~~~g~~~~i~~aL~~a~ 76 (194)
T d1tqyb2 5 AYLP-FDERAAGYV-------PGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAG 76 (194)
T ss_dssp SCCT-TSTTCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHT
T ss_pred CcCc-ccCCCCCEe-------eEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccccchhhhhhhhhhhccccc
Confidence 4667 886 7999 899999999999999999997 5889999988765322 2233567899999999999
Q ss_pred CCCCCccEEEecCCChHH----HHHHH-HHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-C---------
Q 012522 349 LQIDDINLFEINEAFASQ----YVYCI-KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-G--------- 413 (461)
Q Consensus 349 l~~~DID~~eiheafa~~----~~~~~-e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~--------- 413 (461)
++++|||++|.|-..+.. +...+ +.++- ..+.++.-+..+||+.+++|+.+++.++..|+.+ +
T Consensus 77 i~~~di~~v~ahgtGt~~~D~~E~~al~~~f~~--~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~ 154 (194)
T d1tqyb2 77 TGPEDVDVVFADGAGVPELDAAEARAIGRVFGR--EGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSV 154 (194)
T ss_dssp CCGGGCCEEECCCCCSHHHHHHHHHHHHHHHCT--TCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCC
T ss_pred ccccceeeeeccccCcccccHHHhhhhhhhhhc--cccccccccccccccccccccceehhhhhhhhhceeccccCCCCC
Confidence 999999999999776653 22222 33343 3344445567899999999999999999999976 1
Q ss_pred ---------------CCCCEEEEEecccCcceeEEEEEE
Q 012522 414 ---------------KDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 414 ---------------~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
...++++++..+-||.+.++||++
T Consensus 155 ~~~~~~~~v~~~~~~~~~~~a~v~s~GfgG~na~~vl~~ 193 (194)
T d1tqyb2 155 PREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRR 193 (194)
T ss_dssp CGGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEE
T ss_pred CcccCccccCCCCccCCCCEEEEECcCCCceeEEEEEee
Confidence 134678888877788899999986
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.54 E-value=7.8e-15 Score=133.55 Aligned_cols=95 Identities=13% Similarity=0.086 Sum_probs=86.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe-CCCCchHHHHHHHHHHHH
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NRQCSSGLQAVADVATAI 151 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~CaSgl~Al~~A~~~I 151 (461)
+..+|+.+|+++||+++|++|+|||.||++++++.. .|..+..++.++|++..+..+++ +.+|++++++|..|..+|
T Consensus 74 ~a~~la~~Aa~~aL~~ag~~~~dId~lI~~s~t~~~--~P~~aa~v~~~lg~~~~~~~~~i~~~gC~g~~~al~~A~~~l 151 (200)
T d1u0ma1 74 EAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFM--MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFC 151 (200)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCC--SSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhhhheEEEeccCCCC--cchhHHHHHHHHhcCCCeeEeccccchhhHHHHHHHHHHHHH
Confidence 567899999999999999999999999999887654 47788889999999877888888 579999999999999999
Q ss_pred HcCCCCEEEEEeeccccc
Q 012522 152 KAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 152 ~sG~~d~vLv~G~E~~s~ 169 (461)
++|..+.+||++.|.+|.
T Consensus 152 ~~~~~~~vLvv~~e~~S~ 169 (200)
T d1u0ma1 152 TAYPEANALIVACEFCSL 169 (200)
T ss_dssp HHSTTCEEEEEEEEEGGG
T ss_pred HhCCCCEEEEEEEecccc
Confidence 999999999999999886
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=99.54 E-value=7.2e-15 Score=138.34 Aligned_cols=94 Identities=26% Similarity=0.340 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCCc-------------------------cchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGST-------------------------RAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~~-------------------------~~~~a~~ia~~lGl 124 (461)
...++..++++||+++|+++++++ +|++|+..+.... ....+..++..+|+
T Consensus 71 ~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl 150 (249)
T d1j3na1 71 FVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGF 150 (249)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcCC
Confidence 467899999999999999987765 6888875543210 01256678999999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccc
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~ 169 (461)
.+|+++++++|+|++.||.+|+++|++|++|++||+|+|....
T Consensus 151 --~Gp~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~ 193 (249)
T d1j3na1 151 --TGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT 193 (249)
T ss_dssp --CSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS
T ss_pred --CCCccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhC
Confidence 7899999999999999999999999999999999999997654
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.54 E-value=2.4e-14 Score=130.73 Aligned_cols=158 Identities=20% Similarity=0.243 Sum_probs=123.0
Q ss_pred ccCCCCCC--CCccccCCCCcccccceEEEEcchhHHHhcCCCeeEEEEEeeeeccC-----CCCCCCcHHHHHHHHHHH
Q 012522 274 KLKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKS 346 (461)
Q Consensus 274 ~~~pvf~~--~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~ai~~aL~~ 346 (461)
.+|| ||. ||++ ++||++++||++.+.|.+++.++++.|.|++..... +...+.....+++++|++
T Consensus 6 ~~rp-FD~~adG~v-------~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~ 77 (205)
T d1tqya2 6 ASRP-FDGTRDGFV-------LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDE 77 (205)
T ss_dssp CCCT-TBTTCCCBC-------EECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHH
T ss_pred CCCC-ccCCCCCEe-------eEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhh
Confidence 4566 876 8999 899999999999999999999999999998876532 223334566889999999
Q ss_pred cCCCCCCccEEEecCCChHH----HHHHH-HHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc---------
Q 012522 347 AGLQIDDINLFEINEAFASQ----YVYCI-KKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR--------- 412 (461)
Q Consensus 347 AGl~~~DID~~eiheafa~~----~~~~~-e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~--------- 412 (461)
++++++|||+||.|-.-+.. +...+ +.++-...++.++.-+..+||+.+++|+.+++.++..|+.+
T Consensus 78 a~i~~~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~ 157 (205)
T d1tqya2 78 SRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLR 157 (205)
T ss_dssp HTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCC
T ss_pred hcCCccceeeeeccccccccCchhHHHHHHHhhccccCCceeeeecccccccccccchhHHHHHHHHHhCCeEcccCCCC
Confidence 99999999999999876653 22222 23332233455666678899999999999999999999977
Q ss_pred ----------C------CCCCEEEEEecccCcceeEEEEEEcc
Q 012522 413 ----------G------KDCRFGVISMCIGSGMGAAAVFERGD 439 (461)
Q Consensus 413 ----------~------~~~~~gl~~~~~g~G~g~A~v~~~~~ 439 (461)
+ ...++++++.++-||.+.++||++.+
T Consensus 158 ~~~p~~~~~~v~~~~~~~~~~~a~~~s~GfGG~na~~vl~~~~ 200 (205)
T d1tqya2 158 TSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRDAE 200 (205)
T ss_dssp SBBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECHH
T ss_pred CCCCCCCcccCCCCCcCCCCCEEEEeCCCCCceeEEEEEeeCC
Confidence 1 14467888877677888899988654
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=99.53 E-value=2.9e-14 Score=134.11 Aligned_cols=94 Identities=16% Similarity=0.155 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCCc-------------------------cchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGST-------------------------RAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~~-------------------------~~~~a~~ia~~lGl 124 (461)
...|+..++++||+++|+++++.+ ++++|+....... ...++..++..+|+
T Consensus 72 ~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 151 (250)
T d2gfva1 72 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 151 (250)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCC
Confidence 467899999999999999887665 4677765432210 01256778999999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccc
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~ 169 (461)
++|+++|+++|+|+++||..|+++|++|++|++||+|+|....
T Consensus 152 --~Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~ 194 (250)
T d2gfva1 152 --RGPSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKAST 194 (250)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS
T ss_pred --CCCccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcC
Confidence 7999999999999999999999999999999999999997554
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=99.45 E-value=3.7e-13 Score=125.21 Aligned_cols=95 Identities=12% Similarity=-0.016 Sum_probs=80.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeE-EeCCCCchHHHHHHHHHHHH
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR-TVNRQCSSGLQAVADVATAI 151 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~-~v~~~CaSgl~Al~~A~~~I 151 (461)
+..+|+.+|+++||+++|++++|||.||++++++... .+ ....+...+|+..+...+ .++.+|++++++|..|..+|
T Consensus 101 ~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~-p~-~~a~~~~~l~~~~~~~~~~~~~~~C~g~~~al~~A~~~i 178 (235)
T d1bi5a1 101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDM-PG-ADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLA 178 (235)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCS-SC-HHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhHCcEEEEecccCCcc-Cc-cHHHHHHHHhcCCCceEEeeecCccchHHHHHHHHHHHH
Confidence 4568999999999999999999999999999988765 34 444555566664455555 45889999999999999999
Q ss_pred HcCCCCEEEEEeeccccc
Q 012522 152 KAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 152 ~sG~~d~vLv~G~E~~s~ 169 (461)
++|..+.+||+++|.+|.
T Consensus 179 ~~~~~~~vLvV~~E~~S~ 196 (235)
T d1bi5a1 179 ENNKGARVLVVCSEVTAV 196 (235)
T ss_dssp HTSTTCEEEEEEEECGGG
T ss_pred HcCCCCeEEEEEeeecce
Confidence 999999999999999886
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=99.43 E-value=8.6e-13 Score=123.56 Aligned_cols=94 Identities=18% Similarity=0.258 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCCc-------------------------cchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGST-------------------------RAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~~-------------------------~~~~a~~ia~~lGl 124 (461)
...++..++.+||+++|++++.+. .+++|+....... ....+..++..+|+
T Consensus 72 ~~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (250)
T d1e5ma1 72 FCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA 151 (250)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccC
Confidence 357899999999999999876554 4777764332110 01256778889999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccc
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~ 169 (461)
++|+++++++|+|++.||.+|+++|++|++|.+||+|+|....
T Consensus 152 --~Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~ 194 (250)
T d1e5ma1 152 --KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAIT 194 (250)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS
T ss_pred --CCCCccccccchhhhhhhHHHhhcccCCcccccccccchhhcC
Confidence 7999999999999999999999999999999999999997543
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=99.37 E-value=3.1e-13 Score=119.13 Aligned_cols=97 Identities=10% Similarity=0.077 Sum_probs=88.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHH
Q 012522 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (461)
Q Consensus 70 ~~~~~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~ 149 (461)
++++..+|+.+|++++|++. ++++||.+++++.++++. .+..+..++..+|++....+++++.+|++++++|.+|..
T Consensus 46 ~~E~~~~ma~~Aa~~al~~~--~~~~id~li~~t~~~~~~-~p~~a~~v~~~lg~~~~~~~~dv~~~C~g~~~al~~A~~ 122 (166)
T d1xpma1 46 VNQDIVSMGANAAKDIITDE--DKKKIGMVIVATESAVDA-AKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKD 122 (166)
T ss_dssp TTCCHHHHHHHHHHTTCCHH--HHHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHhhhccc--cCCCCCeEEEeccccccc-cchhHHHHHHhhccccceEEeeecccHHHHHHHHHHHhh
Confidence 57899999999999999876 478999999999988876 678889999999997778999999999999999999999
Q ss_pred HHHcCCCCEEEEEeeccccc
Q 012522 150 AIKAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~E~~s~ 169 (461)
+|++|..+.+||++.|..+.
T Consensus 123 ~i~~~~~~~alvV~sd~~~~ 142 (166)
T d1xpma1 123 YLATRPNEKVLVIATDTARY 142 (166)
T ss_dssp HHTTCTTCEEEEEEEEEECC
T ss_pred HHhcCCCCeEEEEEEceEec
Confidence 99999999999999997554
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=99.28 E-value=7.3e-12 Score=117.27 Aligned_cols=94 Identities=15% Similarity=0.148 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC-----eEEEEeecCCCC------------c--------------cchHHHHHHHHc
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG-----DIVVGTVLAPGS------------T--------------RAMECRMAAFYA 122 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id-----~vi~g~~~~~~~------------~--------------~~~~a~~ia~~l 122 (461)
...+...+..+|+.++++.....+ ++++|+..+... . ....+..++..+
T Consensus 71 ~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 150 (253)
T d2vbaa1 71 ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF 150 (253)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTT
T ss_pred hhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceecccc
Confidence 455888899999999998753321 456665443211 0 012566788889
Q ss_pred CCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccc
Q 012522 123 GFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 123 Gl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~ 169 (461)
|+ ++|.++++++|+|++.||.+|++.|++|++|++||+|+|.+..
T Consensus 151 g~--~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~~ 195 (253)
T d2vbaa1 151 KI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCW 195 (253)
T ss_dssp TC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH
T ss_pred Cc--ccceeeeeccchhHHHHHHHHHHhcchhccceeeecchhhhhc
Confidence 99 7999999999999999999999999999999999999998765
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=99.14 E-value=5.3e-11 Score=111.94 Aligned_cols=54 Identities=24% Similarity=0.371 Sum_probs=50.4
Q ss_pred HHHHHHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccc
Q 012522 114 ECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 114 ~a~~ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~ 169 (461)
.+..++..+|+ ++|+++|+++|+|++.||.+|+++|++|++|++||+|+|....
T Consensus 158 ~a~~is~~~~l--~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~ 211 (270)
T d2ix4a1 158 ASGHVSMKYGF--QGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSID 211 (270)
T ss_dssp HHHHHHHHHTC--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS
T ss_pred hHHHHHHHhCC--CCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhh
Confidence 67788899999 7999999999999999999999999999999999999998654
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.00 E-value=8.3e-10 Score=95.83 Aligned_cols=123 Identities=22% Similarity=0.263 Sum_probs=94.3
Q ss_pred CeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChH----HHHHHHH-HcCCCCCCcCC
Q 012522 314 PILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFAS----QYVYCIK-KLGLDPEKVNV 383 (461)
Q Consensus 314 ~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~----~~~~~~e-~LGl~~~~vn~ 383 (461)
+++++|+|++.... .|...+.+...+++++|+++|++++|||+++.|-.-+. .+...++ .+| .++.+
T Consensus 1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg---~~~~v 77 (158)
T d1ox0a2 1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLG---KEVPV 77 (158)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHC---SSSEE
T ss_pred CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcC---CcccC
Confidence 36889999988753 34444556678999999999999999999999988664 2333333 233 33445
Q ss_pred CCCcccccCchhhHHHHHHHHHHHHHHcc-C------------------------CCCCEEEEEecccCcceeEEEEEEc
Q 012522 384 NGGAVALGHPLGATGARCVATLLSEMKRR-G------------------------KDCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 384 ~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~------------------------~~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+.-+..+||+.+++|+.+++.++.+|+.+ + .+.++.++++++-||.+.++||++.
T Consensus 78 ~s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~~ 157 (158)
T d1ox0a2 78 SSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKRW 157 (158)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred cCcccccccchhhhhhhhhcccccccccceeccccCCCCCCcccCcccccCccccCCCCEEEEeCcCCCcEeEEEEEEec
Confidence 55677899999999999999999999976 0 1447888888877888999999875
Q ss_pred c
Q 012522 439 D 439 (461)
Q Consensus 439 ~ 439 (461)
|
T Consensus 158 ~ 158 (158)
T d1ox0a2 158 E 158 (158)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=98.93 E-value=2.3e-09 Score=93.25 Aligned_cols=124 Identities=19% Similarity=0.296 Sum_probs=92.9
Q ss_pred CeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChH----HHHHHHHH-cCCCCCCcCC
Q 012522 314 PILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFAS----QYVYCIKK-LGLDPEKVNV 383 (461)
Q Consensus 314 ~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~----~~~~~~e~-LGl~~~~vn~ 383 (461)
+++++|.|++.... .|...+.+...+++++|+++|++++||||+|.|-.-+. .+...++. ++-...++.+
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (161)
T d2gfva2 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhcccccccee
Confidence 47889999988753 23334556678999999999999999999999976654 23333332 2322334455
Q ss_pred CCCcccccCchhhHHHHHHHHHHHHHHcc--------------------------CCCCCEEEEEecccCcceeEEEEEE
Q 012522 384 NGGAVALGHPLGATGARCVATLLSEMKRR--------------------------GKDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 384 ~GG~~~~Ghp~gatG~~~~~~~~~~L~~~--------------------------~~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.-+..+||..+++|+.+++.++.+|+.+ .++.+++++++++-||.+.++||++
T Consensus 81 ~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vnsfGfgG~Na~lil~~ 160 (161)
T d2gfva2 81 SSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCSBCCBSSCEECSSCCEEEEEEEEGGGEEEEEEEEC
T ss_pred ccccccccccHHHHHHHHHHHHHHHhcCCEecccccccccccccccccccccCccCCCCcEEEEeCcCccceeEEEEEEE
Confidence 56678899999999999999999999976 1244778888877788888998886
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.93 E-value=1.5e-09 Score=98.83 Aligned_cols=95 Identities=20% Similarity=0.367 Sum_probs=76.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCe----EEEEeecCCCCc-------------------------------cchHHHH
Q 012522 73 LADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGST-------------------------------RAMECRM 117 (461)
Q Consensus 73 ~~~eL~~~A~~~AL~~agl~~~~Id~----vi~g~~~~~~~~-------------------------------~~~~a~~ 117 (461)
....|+..|+++||+++|+++++++. +++++..+.... ...++..
T Consensus 70 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 149 (216)
T d1tqya1 70 RASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAE 149 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHH
T ss_pred cchhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHH
Confidence 35678999999999999999876653 555543322110 0125678
Q ss_pred HHHHcCCCCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeeccccc
Q 012522 118 AAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169 (461)
Q Consensus 118 ia~~lGl~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s~ 169 (461)
++..+|+ .+|.++++.+|+|+++||.+|+.+|++|++|++||+|+|....
T Consensus 150 ia~~~g~--~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~ 199 (216)
T d1tqya1 150 VAWAVGA--EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT 199 (216)
T ss_dssp HHHHHTC--CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS
T ss_pred HHHhcCc--cccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccC
Confidence 8889999 7999999999999999999999999999999999999997543
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=98.89 E-value=3e-09 Score=92.55 Aligned_cols=125 Identities=18% Similarity=0.213 Sum_probs=93.6
Q ss_pred CeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChH----HHHHHHHH-cCCCCCCcCC
Q 012522 314 PILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFAS----QYVYCIKK-LGLDPEKVNV 383 (461)
Q Consensus 314 ~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~----~~~~~~e~-LGl~~~~vn~ 383 (461)
+++++|.|++...+ .|...+.+...+++++|+++|++++|||++|.|-.-+. .+...++. ++-...++.+
T Consensus 1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v 80 (161)
T d1e5ma2 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCCCcceE
Confidence 47899999988764 23344566789999999999999999999999977654 33333333 2222234455
Q ss_pred CCCcccccCchhhHHHHHHHHHHHHHHcc-C------------------------CCCCEEEEEecccCcceeEEEEEEc
Q 012522 384 NGGAVALGHPLGATGARCVATLLSEMKRR-G------------------------KDCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 384 ~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~------------------------~~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
+.-+..+||+.+|+|+..++.++.+|+.+ + ...+++++++++-||.+.++||++-
T Consensus 81 ~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~y 160 (161)
T d1e5ma2 81 SSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKKY 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred EecccccccccccchhhHHHHhHHhcccCeeCCccCCCCCCCCCCcccCcCcccCCCCCEEEEeCcCcCcEeEEEEEeee
Confidence 55567899999999999999999999976 0 1346788888777888899998864
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=98.87 E-value=2.9e-09 Score=92.45 Aligned_cols=124 Identities=22% Similarity=0.328 Sum_probs=91.6
Q ss_pred CeeEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HHHHHHHc-CCCCCCcCC
Q 012522 314 PILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQ----YVYCIKKL-GLDPEKVNV 383 (461)
Q Consensus 314 ~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~----~~~~~e~L-Gl~~~~vn~ 383 (461)
+++++|.|++.+.. .|...+.+...+++++|+++|++++|||++|.|..-+.. ++..++++ +-...++.+
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (159)
T d1j3na2 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMV 80 (159)
T ss_dssp CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceE
Confidence 47889999988753 344445667789999999999999999999999766542 22222211 111123344
Q ss_pred CCCcccccCchhhHHHHHHHHHHHHHHcc-C-----------------------CCCCEEEEEecccCcceeEEEEEE
Q 012522 384 NGGAVALGHPLGATGARCVATLLSEMKRR-G-----------------------KDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 384 ~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~-----------------------~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.-+..+||..+++|+..++.++..|+.+ + .+.+++++++++-||.+.++||+|
T Consensus 81 ~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~sfGfgG~Na~~vl~k 158 (159)
T d1j3na2 81 SSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 158 (159)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred ecccccccccccccccchhhhhhhHhhCCEeccccccccccceeeeeccCcccCCCCCEEEEeCCCCCceeEEEEEEE
Confidence 55567899999999999999999999976 1 145778888887788889999986
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.85 E-value=3.3e-09 Score=95.83 Aligned_cols=92 Identities=14% Similarity=0.250 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----eEEEEeecCCCC-----------c--------------cchHHHHHHHHcCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-----------T--------------RAMECRMAAFYAGF 124 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id----~vi~g~~~~~~~-----------~--------------~~~~a~~ia~~lGl 124 (461)
...|+..++.+||+++|+++++++ .+++|+..+... . ....+..++..+|+
T Consensus 70 ~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 149 (208)
T d1tqyb1 70 STRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGM 149 (208)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTC
T ss_pred ccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccc
Confidence 356899999999999999988775 477777543221 0 01246788999999
Q ss_pred CCCCCeEEeCCCCchHHHHHHHHHHHHHcCCCCEEEEEeecccc
Q 012522 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168 (461)
Q Consensus 125 ~~~~~~~~v~~~CaSgl~Al~~A~~~I~sG~~d~vLv~G~E~~s 168 (461)
++|+++++++|+|++.||..|+++|++| +|++||+|+|.+-
T Consensus 150 --~Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l 190 (208)
T d1tqyb1 150 --RGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSAL 190 (208)
T ss_dssp --CSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCC
T ss_pred --cceeeeccccccHHHHHHHHHHHHHHcC-CCEEEECcccccc
Confidence 7999999999999999999999999999 8999999999743
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=98.77 E-value=1.5e-08 Score=88.00 Aligned_cols=122 Identities=19% Similarity=0.223 Sum_probs=89.9
Q ss_pred eEEEEEeeeecc-----CCCCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChHH----HHHHHH-HcCCC--CCCcCC
Q 012522 316 LGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQ----YVYCIK-KLGLD--PEKVNV 383 (461)
Q Consensus 316 ~a~i~g~~~~~~-----~p~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~~----~~~~~e-~LGl~--~~~vn~ 383 (461)
+++|.|++.... .|...+.+...+++++|++++++++||||+|.|-..+.. +...++ .++-. ..++.+
T Consensus 1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i 80 (161)
T d2ix4a2 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAF 80 (161)
T ss_dssp CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEE
T ss_pred CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceee
Confidence 468888887653 344445556688999999999999999999999776642 222222 22211 133445
Q ss_pred CCCcccccCchhhHHHHHHHHHHHHHHcc-C-------------------------CCCCEEEEEecccCcceeEEEEEE
Q 012522 384 NGGAVALGHPLGATGARCVATLLSEMKRR-G-------------------------KDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 384 ~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~-------------------------~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+.-+..+||+.+++|+.+++.++.+|+.+ + ...+++++++++.||.+.++||++
T Consensus 81 ~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfgG~Na~lvl~~ 160 (161)
T d2ix4a2 81 SSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred eccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccCcccCccccCCCCCcCEEEEeCCcccceeEEEEEEe
Confidence 55677899999999999999999999977 0 145788888888888889998875
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.53 E-value=1.9e-07 Score=79.60 Aligned_cols=97 Identities=25% Similarity=0.279 Sum_probs=69.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDC 416 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~ 416 (461)
.++++++|+++|++++|||+|.+|+++.......++.||++++++..+ -.--+||..+++-...+.+++.+-+ ++.+
T Consensus 51 ~~~i~~~L~~~gl~~~dId~~i~Hqa~~~i~~~v~~~lgl~~ek~~~~-~~~~~GNt~sasip~~L~~a~~~g~--i~~G 127 (148)
T d1u6ea2 51 GDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVAN-DIEHTGNTSAASIPLAMAELLTTGA--AKPG 127 (148)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHTCCTTCEECC-THHHHCBCGGGHHHHHHHHHHHHTS--SCTT
T ss_pred HHHHHHHHHHcCCCcccccEEEeccccHHHHHHHHHhcCCCchhhhhh-hHHhhCCCccchHHHHHHHHHHcCC--CCCC
Confidence 478999999999999999999999999999999999999999886544 1234688887775545544444322 2244
Q ss_pred CEEEEEecccCcceeEEEEEE
Q 012522 417 RFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 417 ~~gl~~~~~g~G~g~A~v~~~ 437 (461)
.+.++... |.|+.++.++.|
T Consensus 128 d~vll~gf-G~G~s~~a~llr 147 (148)
T d1u6ea2 128 DLALLIGY-GAGLSYAAQVVR 147 (148)
T ss_dssp CEEEEEEE-ETTTEEEEEEEE
T ss_pred CEEEEEEE-chhhhheEEEEe
Confidence 44444432 566666555443
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=98.42 E-value=4.1e-07 Score=77.55 Aligned_cols=97 Identities=24% Similarity=0.225 Sum_probs=68.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHccCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDC 416 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~~~~~ 416 (461)
..+++++|+++|++++|||+|.+|+++........+.|+++++++..+ .--+||..+++-...+.+++.+-+ ++.+
T Consensus 50 p~~i~~~L~~~g~~~~dId~~i~Hqa~~~~~~~i~~~lgi~~~k~~~~--~~~~Gn~~sasip~~L~~~~~~~~--~~~G 125 (149)
T d1ub7a2 50 NTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAVN--VDRYGNTSTASIPLALKEAVDAGR--IREG 125 (149)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHTTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHTS--SCTT
T ss_pred HHHHHHHHHhhccccccccEEEeeccchHHHHHHHhhccchhhHHHHH--HHHhcCCcchhHHHHHHHHHHcCC--CCCC
Confidence 478999999999999999999999999999999999999999987654 244788877774433333333211 2244
Q ss_pred CEEEEEecccCcceeEEEEEEc
Q 012522 417 RFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 417 ~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
...++.. .|.|+.++.++-+.
T Consensus 126 d~vll~g-~G~G~s~ga~llrw 146 (149)
T d1ub7a2 126 DHVLLVS-FGAGLTWAAAVLTW 146 (149)
T ss_dssp CEEEEEE-EETTTEEEEEEEEC
T ss_pred CEEEEEE-EchHhhhEEEEEEE
Confidence 4444443 25666655555443
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=98.36 E-value=4.7e-07 Score=77.54 Aligned_cols=93 Identities=23% Similarity=0.244 Sum_probs=62.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc--CC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR--GK 414 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~--~~ 414 (461)
..+++++|+++|++++|||+|.+|+++..+.....+.||++++++-++ -.--+||..++| +..++.++.++ .+
T Consensus 51 p~~i~~~L~~~gl~~~dId~~i~Hq~~~~~~~~v~~~lgi~~ek~~~~-~~~~~GNt~Sas----ip~~L~~~~~~~~~~ 125 (153)
T d1mzja2 51 VPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSR-DAEDTGNTSSAS----VALALDRLVRSGAVP 125 (153)
T ss_dssp HHHHHHHHHTTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCTTSEECC-THHHHCBCTTHH----HHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHhCCCcccCCEEEEcCCcHHHHHHHHHHhCCCchhcchh-hhhhcCCcccch----HHHHHHHHHHcCCCC
Confidence 468899999999999999999999999999999999999999985321 012356665554 33334433322 22
Q ss_pred -CCCEEEEEecccCccee-EEEEE
Q 012522 415 -DCRFGVISMCIGSGMGA-AAVFE 436 (461)
Q Consensus 415 -~~~~gl~~~~~g~G~g~-A~v~~ 436 (461)
+.++.++.+ |.|+.+ +++|+
T Consensus 126 ~Gd~ill~~f--G~G~s~~~~~l~ 147 (153)
T d1mzja2 126 GGGPALMIGF--GAGLSYAGQALL 147 (153)
T ss_dssp TTCEEEEEEE--ETTTEEEEEEEE
T ss_pred CCCEEEEEEE--chhhhhhEEEEE
Confidence 344444443 666654 44443
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=98.35 E-value=8.4e-07 Score=75.03 Aligned_cols=95 Identities=16% Similarity=0.183 Sum_probs=67.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc-CCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR-GKD 415 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~-~~~ 415 (461)
..+++++|+++|++++|||+|.+|+++........+.||++++++..+ .--+||...++-...+.++ ++.. ++.
T Consensus 47 ~~~i~~~L~~~g~~~~dId~~i~Hq~~~~~~~~~~~~l~l~~~k~~~~--~~~~GN~~sasip~~L~~~---~~~~~~~~ 121 (143)
T d1hnja2 47 AHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVT--LDRHGNTSAASVPCALDEA---VRDGRIKP 121 (143)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHH---HHTTCSCT
T ss_pred hHHHHHHHHHhhhcccccceEEeccCchHHHHHHHHhCccchhhhhhh--hhhhcccccchHHHHHHHH---HHhCCCCC
Confidence 468999999999999999999999999999999999999999887554 3457888777744333333 3322 223
Q ss_pred CCEEEEEecccCcceeEEEEEE
Q 012522 416 CRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 416 ~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
+...+... .|.|+.++.++.|
T Consensus 122 Gd~vll~g-~G~G~s~g~~llr 142 (143)
T d1hnja2 122 GQLVLLEA-FGGGFTWGSALVR 142 (143)
T ss_dssp TCEEEEEE-EETTTEEEEEEEE
T ss_pred CCEEEEEE-EehhhhhEEEEEE
Confidence 44444443 3666666555543
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=98.28 E-value=2.3e-06 Score=72.97 Aligned_cols=117 Identities=15% Similarity=0.177 Sum_probs=82.6
Q ss_pred eEEEEEeeeeccCC---CCCCCcHHHHHHHHHHHcCCCCCCccEEEecCCChH----HHHHHHH-HcCCCCCCcCCCCCc
Q 012522 316 LGVFRSFSAVGVDP---SVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFAS----QYVYCIK-KLGLDPEKVNVNGGA 387 (461)
Q Consensus 316 ~a~i~g~~~~~~~p---~~~~~~~~~ai~~aL~~AGl~~~DID~~eiheafa~----~~~~~~e-~LGl~~~~vn~~GG~ 387 (461)
+++|.|++...+.. ...+.+...+++++|+.+ +.|||+++.|-.-+. .+...++ .+| +..+.++.-+
T Consensus 1 Yaei~G~g~~~Dg~~~taP~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg--~~~~~v~s~K 75 (151)
T d2vbaa2 1 YAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFG--DKSPAISATK 75 (151)
T ss_dssp CEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHT--TCCCEEECTH
T ss_pred CEEEEEEEEecCCCCCCCcCHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhC--CCCcccccch
Confidence 46888888765322 122446678899998766 579999999976554 3333333 333 2233334456
Q ss_pred ccccCchhhHHHHHHHHHHHHHHcc-C------------------------CCCCEEEEEecccCcceeEEEEEE
Q 012522 388 VALGHPLGATGARCVATLLSEMKRR-G------------------------KDCRFGVISMCIGSGMGAAAVFER 437 (461)
Q Consensus 388 ~~~Ghp~gatG~~~~~~~~~~L~~~-~------------------------~~~~~gl~~~~~g~G~g~A~v~~~ 437 (461)
..+||..+++|+..++.++..|+.+ + ...+..++++++-||.+.++||+|
T Consensus 76 ~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~nsfGfGG~Na~~vl~~ 150 (151)
T d2vbaa2 76 AMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRK 150 (151)
T ss_dssp HHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred hhccccccchhhhhhhHHHHHHHcCCcccccCccccccccccccccCcCcCCCCCEEEEeCCcccceeEEEEEEE
Confidence 7799999999999999999999876 0 134677888877788889999986
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.12 E-value=9.8e-07 Score=75.03 Aligned_cols=97 Identities=15% Similarity=0.150 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCC-CcccccCchhhHHHHHHHHHHHHHHcc--
Q 012522 336 PAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNG-GAVALGHPLGATGARCVATLLSEMKRR-- 412 (461)
Q Consensus 336 ~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~G-G~~~~Ghp~gatG~~~~~~~~~~L~~~-- 412 (461)
..++++++|+++|++++|||+|.+|+..........+.||++++++..+= -.--+||...+| +..+++++.++
T Consensus 45 ~~~~i~~~l~~~g~~~~did~~~~Hq~~~~i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sas----i~~~L~~~~~~~~ 120 (148)
T d1u0ma2 45 LAPALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAV----VLDALRRLFDEGG 120 (148)
T ss_dssp HHHHHHHHHHTTSCCSSCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHH----HHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEECCCCHHHHHHHHHHhCCChhhhhHHHHHHHhcCCCCcch----HHHHHHHHHHcCC
Confidence 45789999999999999999999999999999999999999999864310 012357777776 33444444433
Q ss_pred -CCCCCEEEEEecccCcceeEEEEEEc
Q 012522 413 -GKDCRFGVISMCIGSGMGAAAVFERG 438 (461)
Q Consensus 413 -~~~~~~gl~~~~~g~G~g~A~v~~~~ 438 (461)
.++.++.++.+ |.|+.+.+++.+.
T Consensus 121 ~~~Gd~ill~gf--G~G~s~~~~llrW 145 (148)
T d1u0ma2 121 VEEGARGLLAGF--GPGITAEMSLGCW 145 (148)
T ss_dssp CCSSCCCEEEEE--ETTTEEEEEEEEE
T ss_pred CCCCCEEEEEEE--chHhEeeEEEEEE
Confidence 23445444443 6777776666655
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=97.67 E-value=7.8e-05 Score=63.63 Aligned_cols=102 Identities=16% Similarity=0.142 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCC-CCcccccCchhhHHHHHHHHHHHHHHcc--
Q 012522 336 PAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVN-GGAVALGHPLGATGARCVATLLSEMKRR-- 412 (461)
Q Consensus 336 ~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~-GG~~~~Ghp~gatG~~~~~~~~~~L~~~-- 412 (461)
....++++|+++|++.+|||+|.+|++...+.....+.|||+++++-.+ --+--+||...+|-...+-++..+-...
T Consensus 49 v~~~v~~~l~~~gl~~~di~~~v~Hqgg~~Ild~i~~~L~L~~~~l~~s~~vl~~yGNtSSaSI~~vL~~~~~~~~~~~~ 128 (160)
T d1ee0a2 49 IENAAEKALSPLGITDWNSVFWMVHPGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGK 128 (160)
T ss_dssp HHHHHHHHHGGGTCCCGGGSEEEECCSSHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhccCCccccceEeecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCccchHHHHHHHHHhhhhhcCC
Confidence 3578899999999999999999999999999999999999999886332 1122468888888665555555443322
Q ss_pred ---CCCCCEEEEEecccCccee-EEEEEEc
Q 012522 413 ---GKDCRFGVISMCIGSGMGA-AAVFERG 438 (461)
Q Consensus 413 ---~~~~~~gl~~~~~g~G~g~-A~v~~~~ 438 (461)
.++..+++..+ .|.|+.+ .+++++.
T Consensus 129 ~~~g~~~d~~ll~a-fG~Glt~~~~llr~~ 157 (160)
T d1ee0a2 129 STTGEGLDCGVLFG-FGPGMTVETVVLRSV 157 (160)
T ss_dssp SBTBTTBSEEEEEE-EETTTEEEEEEEEEC
T ss_pred CCcCCCcCEEEEEE-EChHHHHHHHHHeec
Confidence 01224556554 3667665 4555554
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=97.59 E-value=9.7e-05 Score=62.64 Aligned_cols=101 Identities=18% Similarity=0.209 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCC-cccccCchhhHHHHHHHHHHHHHHcc--
Q 012522 336 PAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGG-AVALGHPLGATGARCVATLLSEMKRR-- 412 (461)
Q Consensus 336 ~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG-~~~~Ghp~gatG~~~~~~~~~~L~~~-- 412 (461)
....+.++|+++|++.+|||+|.+|++...+.....+.|||+++++..+=- .-.+||..++|=...+-++..+-+..
T Consensus 44 i~~~~~~~l~~~gl~~~di~~~v~Hqgg~~Ild~v~~~L~L~~~~~~~s~~vl~~yGN~SSasi~~vL~~~~~~~~~~~~ 123 (154)
T d1bi5a2 44 ITKALVEAFEPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGL 123 (154)
T ss_dssp HHHHHHHHHGGGTCCCTTSSEEEECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCccccceEeeccccHHHHHHHHHHhCCCHHHHHHhHHHHHhcCCCCcccHHHHHHHHHHhhhccCC
Confidence 357888999999999999999999999999999999999999998754211 23468988888665555555544322
Q ss_pred ---CCCCCEEEEEecccCccee-EEEEEE
Q 012522 413 ---GKDCRFGVISMCIGSGMGA-AAVFER 437 (461)
Q Consensus 413 ---~~~~~~gl~~~~~g~G~g~-A~v~~~ 437 (461)
.++..+++..+ .|.|+.+ +++|++
T Consensus 124 ~~~g~~~~~~~~~a-FG~Glt~~~~llr~ 151 (154)
T d1bi5a2 124 KTTGEGLEWGVLFG-FGPGLTIETVVLRS 151 (154)
T ss_dssp SBTTTTCSEEEEEE-EETTTEEEEEEEEE
T ss_pred cccCCCcCEEEEEE-EchHHhHHHHHHhc
Confidence 11224566554 3666665 455554
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=97.55 E-value=0.00012 Score=62.15 Aligned_cols=102 Identities=15% Similarity=0.097 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCCCcCCCCC-cccccCchhhHHHHHHHHHHHHHHcc--
Q 012522 336 PAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGG-AVALGHPLGATGARCVATLLSEMKRR-- 412 (461)
Q Consensus 336 ~~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~~vn~~GG-~~~~Ghp~gatG~~~~~~~~~~L~~~-- 412 (461)
....++++|+++|++.+|||+|.+|++...+.....+.|||+++++..+=- .--+||..++|=...+-++.++...+
T Consensus 45 i~~~~~~~l~~~~~~~~did~~i~Hqgg~~Ild~v~~~L~L~~~k~~~s~~~l~~~GN~sSasip~~L~~~~~~~~~~~~ 124 (156)
T d1u0ua2 45 IENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGC 124 (156)
T ss_dssp HHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCChhhCceEeecCCcHHHHHHHHHHhCCCcccchhhHHHHhhcCCCCcccHHHHHHHHHHhhhhccC
Confidence 457889999999999999999999999999999999999999998743211 12468888887555444444433221
Q ss_pred ---CCCCCEEEEEecccCccee-EEEEEEc
Q 012522 413 ---GKDCRFGVISMCIGSGMGA-AAVFERG 438 (461)
Q Consensus 413 ---~~~~~~gl~~~~~g~G~g~-A~v~~~~ 438 (461)
.++..+++... .|.|+.+ +++|++.
T Consensus 125 ~~~~~~~~~~~~~g-fG~Glt~~~~llr~~ 153 (156)
T d1u0ua2 125 STTGEGLEMGVLFG-FGPGLTIETVVLKSV 153 (156)
T ss_dssp SBSBTTBSEEEEEE-EETTTEEEEEEEEEC
T ss_pred CCcCCCCCEEEEEE-ECHHHhHHHHHHeeC
Confidence 12345666654 3666655 5555554
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.63 E-value=0.053 Score=44.68 Aligned_cols=84 Identities=13% Similarity=0.108 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEE-e----CCCCchHHHHHHHHHH
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRT-V----NRQCSSGLQAVADVAT 149 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~-v----~~~CaSgl~Al~~A~~ 149 (461)
.....++++++|+++|++++|||.++.= +. ....-..++..+|+|.+....+ + |..++|-..+|..+.+
T Consensus 47 ~~~v~~~i~~~L~~~gl~~~dId~~i~H----qa--~~~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~~L~~a~~ 120 (148)
T d1u6ea2 47 AFKMGDVGRRAMDAAGVRPDQIDVFVPH----QA--NSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLT 120 (148)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEC----CS--CHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcccccEEEec----cc--cHHHHHHHHHhcCCCchhhhhhhHHhhCCCccchHHHHHHHHHH
Confidence 3455678999999999999999998862 21 2445667888999975543333 2 3334445556666555
Q ss_pred HHHcCCCCEEEEEee
Q 012522 150 AIKAGLYDIGIAAGL 164 (461)
Q Consensus 150 ~I~sG~~d~vLv~G~ 164 (461)
.=+-..-|.+|++|+
T Consensus 121 ~g~i~~Gd~vll~gf 135 (148)
T d1u6ea2 121 TGAAKPGDLALLIGY 135 (148)
T ss_dssp HTSSCTTCEEEEEEE
T ss_pred cCCCCCCCEEEEEEE
Confidence 422222367777664
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=93.97 E-value=0.068 Score=43.99 Aligned_cols=84 Identities=18% Similarity=0.090 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATAI 151 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~~I 151 (461)
....++++++|+++|++++|||.+++ ++. ....-..++..+|+|.+.-..++ |.+++|-..+|..+...=
T Consensus 47 ~~vp~~i~~~L~~~g~~~~dId~~i~----Hqa--~~~~~~~i~~~lgi~~~k~~~~~~~~Gn~~sasip~~L~~~~~~~ 120 (149)
T d1ub7a2 47 RVMNTATLEAIEKAGLTPEDIRLFVP----HQA--NLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEAVDAG 120 (149)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEE----CCS--CHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhccccccccEEEe----ecc--chHHHHHHHhhccchhhHHHHHHHHhcCCcchhHHHHHHHHHHcC
Confidence 44568889999999999999999886 222 34566778889999755433333 233334444554444431
Q ss_pred HcCCCCEEEEEeec
Q 012522 152 KAGLYDIGIAAGLE 165 (461)
Q Consensus 152 ~sG~~d~vLv~G~E 165 (461)
+-..-|.+|++|+-
T Consensus 121 ~~~~Gd~vll~g~G 134 (149)
T d1ub7a2 121 RIREGDHVLLVSFG 134 (149)
T ss_dssp SSCTTCEEEEEEEE
T ss_pred CCCCCCEEEEEEEc
Confidence 22334678887754
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=92.85 E-value=0.14 Score=41.78 Aligned_cols=81 Identities=15% Similarity=0.112 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEe----CCCCchHHHHHHHHHHHH
Q 012522 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATAI 151 (461)
Q Consensus 76 eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~CaSgl~Al~~A~~~I 151 (461)
....++++++|+++|++++|||.++. .+. ....-..++..+|+|.+....++ |.+++|-..+|..+.+
T Consensus 44 ~~~~~~i~~~L~~~g~~~~dId~~i~----Hq~--~~~~~~~~~~~l~l~~~k~~~~~~~~GN~~sasip~~L~~~~~-- 115 (143)
T d1hnja2 44 TELAHIVDETLAANNLDRSQLDWLVP----HQA--NLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVR-- 115 (143)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEE----CCS--CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHH--
T ss_pred hhhhHHHHHHHHHhhhcccccceEEe----ccC--chHHHHHHHHhCccchhhhhhhhhhhcccccchHHHHHHHHHH--
Confidence 34567889999999999999999875 221 23456678889999755433333 3344444555554444
Q ss_pred HcCC---CCEEEEEeec
Q 012522 152 KAGL---YDIGIAAGLE 165 (461)
Q Consensus 152 ~sG~---~d~vLv~G~E 165 (461)
.|. -|.+|.+|+-
T Consensus 116 -~~~~~~Gd~vll~g~G 131 (143)
T d1hnja2 116 -DGRIKPGQLVLLEAFG 131 (143)
T ss_dssp -TTCSCTTCEEEEEEEE
T ss_pred -hCCCCCCCEEEEEEEe
Confidence 443 3788887754
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=92.40 E-value=0.13 Score=42.34 Aligned_cols=81 Identities=16% Similarity=0.173 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeE-EeC-CC-CchH--HHHHHHHHH
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR-TVN-RQ-CSSG--LQAVADVAT 149 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~-~v~-~~-CaSg--l~Al~~A~~ 149 (461)
.....++++++|+++|++++|||.+++ ++. ....-..++..+|+|.+.... .+. -+ |+|. ..+|..
T Consensus 47 v~~vp~~i~~~L~~~gl~~~dId~~i~----Hq~--~~~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sasip~~L~~--- 117 (153)
T d1mzja2 47 VADVVPAAREALEVAGLTVGDLVAFVP----HQA--NLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDR--- 117 (153)
T ss_dssp HHHHHHHHHHHHHTTTCCGGGCSEEEE----CCS--CHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHhCCCcccCCEEEE----cCC--cHHHHHHHHHHhCCCchhcchhhhhhcCCcccchHHHHHHH---
Confidence 345567888999999999999999986 222 345566788899997554222 222 23 3332 234443
Q ss_pred HHHcCC---CCEEEEEee
Q 012522 150 AIKAGL---YDIGIAAGL 164 (461)
Q Consensus 150 ~I~sG~---~d~vLv~G~ 164 (461)
.++.|. -|.+|++|+
T Consensus 118 ~~~~~~~~~Gd~ill~~f 135 (153)
T d1mzja2 118 LVRSGAVPGGGPALMIGF 135 (153)
T ss_dssp HHHHTSSCTTCEEEEEEE
T ss_pred HHHcCCCCCCCEEEEEEE
Confidence 444443 377887764
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=91.47 E-value=0.46 Score=39.70 Aligned_cols=77 Identities=19% Similarity=0.310 Sum_probs=48.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN-----EAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih-----eafa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
..+++++|+++|++++|||++... ...+.......+.||+.... ++--..+|+|...-......|..
T Consensus 56 ~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~~~~--------~~di~~~C~g~~~al~~A~~~i~ 127 (174)
T d1hnja1 56 FEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCP--------AFDVAAACAGFTYALSVADQYVK 127 (174)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSC--------EEEECCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCCchh--------hhhhhhhhccHHHHHHHHHHHHh
Confidence 479999999999999999999643 23456677788899996422 22222355555444444444444
Q ss_pred cCCCCCEEEEE
Q 012522 412 RGKDCRFGVIS 422 (461)
Q Consensus 412 ~~~~~~~gl~~ 422 (461)
.. ..+.+|+.
T Consensus 128 sg-~~~~~Lvv 137 (174)
T d1hnja1 128 SG-AVKYALVV 137 (174)
T ss_dssp TT-SCSEEEEE
T ss_pred cC-CcceeEEE
Confidence 41 23544443
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=91.10 E-value=0.24 Score=41.50 Aligned_cols=76 Identities=11% Similarity=0.115 Sum_probs=48.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----ChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEA-----FASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKR 411 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihea-----fa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~ 411 (461)
..+++++|+++|++++|||++...-. .+.......+.||... .++.-..+|+|......+...+..
T Consensus 54 ~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg~~~---------~~~di~~~C~g~~~al~~a~~~~~ 124 (172)
T d1ub7a1 54 FKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLKA---------FAYDLLAGCPGWIYALAQAHALVE 124 (172)
T ss_dssp HHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTCCC---------EEEEEECSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCcccccceEEEEecccccccccchHHHHHHHhccCc---------cceeehhccccHHHHHHHHhhhhh
Confidence 57899999999999999999974422 3344556677888432 234455567776666666655555
Q ss_pred cCCCCCEEEEE
Q 012522 412 RGKDCRFGVIS 422 (461)
Q Consensus 412 ~~~~~~~gl~~ 422 (461)
.. ..+.+|+.
T Consensus 125 ~~-~~~~~Lvv 134 (172)
T d1ub7a1 125 AG-LAQKVLAV 134 (172)
T ss_dssp TT-SCSEEEEE
T ss_pred cC-CcceeEEe
Confidence 41 23444443
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=90.76 E-value=0.34 Score=41.59 Aligned_cols=43 Identities=23% Similarity=0.322 Sum_probs=33.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN----EAFASQYVYCIKKLGLDPE 379 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih----eafa~~~~~~~e~LGl~~~ 379 (461)
..|++++|+++|++++|||++... ...+.......+.||+...
T Consensus 80 ~~Aa~~aL~~ag~~~~dId~lI~~s~t~~~~P~~aa~v~~~lg~~~~ 126 (200)
T d1u0ma1 80 PAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDST 126 (200)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHcCCChhhhheEEEeccCCCCcchhHHHHHHHHhcCCC
Confidence 579999999999999999999743 2334455667788988763
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=89.44 E-value=0.43 Score=44.89 Aligned_cols=43 Identities=21% Similarity=0.232 Sum_probs=33.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCChHHHHHHHHHcCCCCC
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEIN----EAFASQYVYCIKKLGLDPE 379 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eih----eafa~~~~~~~e~LGl~~~ 379 (461)
..|++++|+++|++++|||++... ...+....+..+.||+...
T Consensus 97 ~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~ 143 (372)
T d1teda_ 97 VDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPS 143 (372)
T ss_dssp HHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCc
Confidence 579999999999999999999743 1234456677899999753
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=87.48 E-value=0.57 Score=41.19 Aligned_cols=70 Identities=19% Similarity=0.128 Sum_probs=42.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CChHHHHHHHHHcCCCCCCcCCCCCcccccCchhhHHHHHHHHHHHHHHcc
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINE----AFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRR 412 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eihe----afa~~~~~~~e~LGl~~~~vn~~GG~~~~Ghp~gatG~~~~~~~~~~L~~~ 412 (461)
..|++++|+++|++++|||++...- ..........+.|++...-. ...=+-.||+|.........++-..
T Consensus 107 ~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~p~~~a~~~~~l~~~~~~~------~~~~~~~~C~g~~~al~~A~~~i~~ 180 (235)
T d1bi5a1 107 KEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVK------RYMMYQQGCFAGGTVLRLAKDLAEN 180 (235)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCE------EEEEESCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcEEEEecccCCccCccHHHHHHHHhcCCCce------EEeeecCccchHHHHHHHHHHHHHc
Confidence 5799999999999999999997532 23334445566777654321 1111234566655544444444443
|
| >d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=84.79 E-value=2.6 Score=36.41 Aligned_cols=86 Identities=10% Similarity=0.039 Sum_probs=58.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCChHHHHHHHHHcCCCCC---------CcCCCC-CcccccCchhhHHHHHHHHHH
Q 012522 337 AVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPE---------KVNVNG-GAVALGHPLGATGARCVATLL 406 (461)
Q Consensus 337 ~~ai~~aL~~AGl~~~DID~~eiheafa~~~~~~~e~LGl~~~---------~vn~~G-G~~~~Ghp~gatG~~~~~~~~ 406 (461)
..+.+...++.|.+.+|+|++..|.+|+-+.....+.|..... ++-++= -.--+|+...+|=-..++.++
T Consensus 43 ~~~~~~~~~~~g~~~~dfd~~~fH~P~~km~~ka~~~l~~~~~~~~~~~~~~~~~~s~~~~~~iGN~YTaSlyl~L~Sll 122 (221)
T d1xpma2 43 QQSWNEYAKRQGKSLADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLL 122 (221)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhhheEEeecCchhhHHHHHHHHHhccchhhHHHHHHhhhhHHHHHHhcCCcchHHHHHHHHhhh
Confidence 4566677788999999999999999999999988887754321 111000 012368988888666666665
Q ss_pred HHHHccCCCCCEEEEEe
Q 012522 407 SEMKRRGKDCRFGVISM 423 (461)
Q Consensus 407 ~~L~~~~~~~~~gl~~~ 423 (461)
..-. ..+|.|+++++-
T Consensus 123 ~~~~-~~~G~rIglfSY 138 (221)
T d1xpma2 123 ENRD-LQAGETIGLFSY 138 (221)
T ss_dssp HHSC-CCTTCEEEEEEE
T ss_pred cccc-CCCCCEEEEEEe
Confidence 4321 135788999987
|
| >d1okja1 c.55.1.9 (A:1-106) Hypothetical protein YeaZ {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: YeaZ-like domain: Hypothetical protein YeaZ species: Escherichia coli [TaxId: 562]
Probab=81.68 E-value=0.41 Score=36.61 Aligned_cols=55 Identities=11% Similarity=0.190 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccch----HHHHHHHHcCCCCCCCeEEeC
Q 012522 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAM----ECRMAAFYAGFPETVPLRTVN 134 (461)
Q Consensus 75 ~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~----~a~~ia~~lGl~~~~~~~~v~ 134 (461)
.+.....++++|++++++++|||.++++.-.+.+. +-- .+.-++..+ +.|.+.|+
T Consensus 34 ~~~l~~~i~~~l~~~~~~~~di~~i~v~~GPGsfT-glRig~s~akgla~~~----~ip~~~v~ 92 (106)
T d1okja1 34 TQRILPMVQDILTTSGTSLTDINALAYGRGPGSFT-GVRIGIGIAQGLALGA----ELPMIGVS 92 (106)
T ss_dssp TTTHHHHHHHHHHHTTCCGGGCCEEEEEEESSCHH-HHHHHHHHHHHHHHHT----TCCEEEEE
T ss_pred HHHHHHHHHHHHHhcCCcceeeeEEEEeeccCccc-cchHHHHHHHHHHHHc----CCCEEEeC
Confidence 44566778999999999999999999987543332 322 333444444 45677774
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| >d2a6aa1 c.55.1.9 (A:1-103) Hypothetical protein TM0874 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: YeaZ-like domain: Hypothetical protein TM0874 species: Thermotoga maritima [TaxId: 2336]
Probab=80.92 E-value=0.6 Score=35.40 Aligned_cols=61 Identities=15% Similarity=0.150 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCeEEEEeecCCCCccchHHHHHHHHcCCCCCCCeEEeCC
Q 012522 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNR 135 (461)
Q Consensus 74 ~~eL~~~A~~~AL~~agl~~~~Id~vi~g~~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~ 135 (461)
..+.....++++|++++++++|||.++++...+.+. +--.+..++..+.+-.+.|.+.++.
T Consensus 33 hs~~l~~~i~~~l~~~~~~~~di~~i~v~~GPGsfT-glRig~s~akgla~~~~ip~~gis~ 93 (103)
T d2a6aa1 33 HAEILPVVVKKLLDELDLKVKDLDVVGVGIGPGGLT-GLRVGIATVVGLVSPYDIPVAPLNS 93 (103)
T ss_dssp GGGHHHHHHHHHHHHHTCCGGGCSEEEEECCSSCHH-HHHHHHHHHHHHHGGGTCCEEEECH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHhHHHhhcCCCCcch-hHHHHHHHHHHHHHHcCCCEEEeCH
Confidence 356777889999999999999999999977433322 3223323333332222567777753
|