Citrus Sinensis ID: 012629

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------46
MEMFFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQRRLMVIADKPKTQEWAMKERDAEAEPLNL
ccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHcccccccccccc
cHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccHHccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccHHHEHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHccccHHHcccccccccc
MEMFFYLVFGALGAVVAALELSktnkdrintssafnsFKNNYLLVYSLMMAGDWLQGPYVYYLYStygfgkgeiGQLFiagfgssmlFGTIVGSladkqgrkRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLlvdsfslgpvapfdaAACFLAIGMVIILSswtenygdpseskdLLTQFRGAAVAIASDEKIALLGAIQSLfegsmytfvflwtpalspndeeiphgfIFATFMLASMLGSSLASRlmarspprveSYMQIVFVVSSVSLLLPIVTSFlvapsnvksggisfsgslqllgfctfeacvgifwpSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLynvdafpiTVMFGMCSIFLLVASVLQRRLMVIADKPKTQEWAMKErdaeaeplnl
MEMFFYLVFGALGAVVAALELSKTnkdrintssafnsfKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQRRLMVIAdkpktqewamkerdaeaeplnl
MEMFFYLVFgalgavvaalELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFmlasmlgsslasrlmarsPPRVESYMQIVFvvssvslllPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQRRLMVIADKPKTQEWAMKERDAEAEPLNL
**MFFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP**SKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMA***PRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQRRLMVIAD*********************
MEMFFYLVFGALGAVVAALEL**************NSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSW********************AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQRRLM*************************
MEMFFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQRRLMVIADKPKTQEWAM************
MEMFFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQRRLMVIADKP*******************
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SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEMFFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQRRLMVIADKPKTQEWAMKERDAEAEPLNL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query459 2.2.26 [Sep-21-2011]
Q6N075450 Major facilitator superfa yes no 0.875 0.893 0.378 4e-63
Q921Y4450 Major facilitator superfa yes no 0.808 0.824 0.381 5e-61
Q0VC03450 Major facilitator superfa yes no 0.808 0.824 0.381 8e-60
Q5R542450 Major facilitator superfa yes no 0.808 0.824 0.379 6e-59
Q1KKV8480 Major facilitator superfa N/A no 0.823 0.787 0.341 1e-56
Q6DG19481 Major facilitator superfa yes no 0.821 0.783 0.336 3e-53
Q08B29451 Major facilitator superfa N/A no 0.823 0.838 0.339 8e-53
Q28E13452 Major facilitator superfa yes no 0.884 0.898 0.331 7e-49
>sp|Q6N075|MFSD5_HUMAN Major facilitator superfamily domain-containing protein 5 OS=Homo sapiens GN=MFSD5 PE=2 SV=2 Back     alignment and function desciption
 Score =  242 bits (618), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 164/433 (37%), Positives = 248/433 (57%), Gaps = 31/433 (7%)

Query: 6   YLVFGALGAVVAALELSKTNKD---RINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYY 62
           YL F  L A    LELS+       R  ++ +F  F+ ++  VY L +A DWLQ PY+Y 
Sbjct: 6   YLAFVGLLASCLGLELSRCRAKPPGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYK 65

Query: 63  LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSP 122
           LY  Y F +G+I  L++ G  S++LFG +  SL D  GRK +CV + LTY L C+TK S 
Sbjct: 66  LYQHYYFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKNSCVLFSLTYSLCCLTKLSQ 125

Query: 123 QYKILMIGRILGGIATSLLFSAFESWLVAEHNKR-GFEQQWLSITFSKAIFLGNGLVAIL 181
            Y +L++GR LGG++T+LLFSAFE+W + EH +R  F  +W+  TF++A F  N ++A++
Sbjct: 126 DYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPAEWIPATFARAAF-WNHVLAVV 184

Query: 182 SGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAV 241
           +G+    +     LGPVAPF AA   LA+   + L +W ENY      +       G   
Sbjct: 185 AGVAAEAVASWIGLGPVAPFVAAIPLLALAGALALRNWGENY---DRQRAFSRTCAGGLR 241

Query: 242 AIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSL- 300
            + SD ++ LLG IQ+LFE  ++ FVFLWTP L P+    P G IF++FM AS+LGSSL 
Sbjct: 242 CLLSDRRVLLLGTIQALFESVIFIFVFLWTPVLDPHGA--PLGIIFSSFMAASLLGSSLY 299

Query: 301 ---ASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLG 357
               S+     P  + S + ++ VV S+ +L     +F  +P   +S   SF      + 
Sbjct: 300 RIATSKRYHLQPMHLLS-LAVLIVVFSLFML-----TFSTSPGQ-ESPVESF------IA 346

Query: 358 FCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVC---VVLYNVDAFPITV 414
           F   E   G+++PS+  +R + IPE  ++ ++N+FR+PL+   C   +VL++ D    T 
Sbjct: 347 FLLIELACGLYFPSMSFLRRKVIPETEQAGVLNWFRVPLHSLACLGLLVLHDSDRKTGTR 406

Query: 415 -MFGMCSIFLLVA 426
            MF +CS  +++A
Sbjct: 407 NMFSICSAVMVMA 419

Homo sapiens (taxid: 9606)
>sp|Q921Y4|MFSD5_MOUSE Major facilitator superfamily domain-containing protein 5 OS=Mus musculus GN=Mfsd5 PE=2 SV=1 Back     alignment and function description
>sp|Q0VC03|MFSD5_BOVIN Major facilitator superfamily domain-containing protein 5 OS=Bos taurus GN=MFSD5 PE=2 SV=1 Back     alignment and function description
>sp|Q5R542|MFSD5_PONAB Major facilitator superfamily domain-containing protein 5 OS=Pongo abelii GN=MFSD5 PE=2 SV=1 Back     alignment and function description
>sp|Q1KKV8|MFSD5_TAKRU Major facilitator superfamily domain-containing protein 5 OS=Takifugu rubripes GN=mfsd5 PE=3 SV=1 Back     alignment and function description
>sp|Q6DG19|MFSD5_DANRE Major facilitator superfamily domain-containing protein 5 OS=Danio rerio GN=mfsd5 PE=2 SV=1 Back     alignment and function description
>sp|Q08B29|MFSD5_XENLA Major facilitator superfamily domain-containing protein 5 OS=Xenopus laevis GN=mfsd5 PE=2 SV=1 Back     alignment and function description
>sp|Q28E13|MFSD5_XENTR Major facilitator superfamily domain-containing protein 5 OS=Xenopus tropicalis GN=mfsd5 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query459
255549256460 conserved hypothetical protein [Ricinus 1.0 0.997 0.904 0.0
356509214459 PREDICTED: major facilitator superfamily 1.0 1.0 0.893 0.0
356516093459 PREDICTED: major facilitator superfamily 1.0 1.0 0.893 0.0
224132678459 predicted protein [Populus trichocarpa] 1.0 1.0 0.891 0.0
224120908459 predicted protein [Populus trichocarpa] 1.0 1.0 0.895 0.0
225455290460 PREDICTED: major facilitator superfamily 1.0 0.997 0.880 0.0
449456403459 PREDICTED: major facilitator superfamily 1.0 1.0 0.880 0.0
18417054460 major facilitator protein [Arabidopsis t 1.0 0.997 0.876 0.0
385137884460 major facilitator protein, partial [Arab 1.0 0.997 0.876 0.0
297803322460 hypothetical protein ARALYDRAFT_913755 [ 1.0 0.997 0.876 0.0
>gi|255549256|ref|XP_002515682.1| conserved hypothetical protein [Ricinus communis] gi|223545225|gb|EEF46734.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  867 bits (2240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/460 (90%), Positives = 444/460 (96%), Gaps = 1/460 (0%)

Query: 1   MEMFFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYV 60
           ME+FFY+VFG LGAVVAALELSKTNKDRINTS AFNSFKNNYLLVYSLMMAGDWLQGPYV
Sbjct: 1   MEVFFYMVFGGLGAVVAALELSKTNKDRINTSPAFNSFKNNYLLVYSLMMAGDWLQGPYV 60

Query: 61  YYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKH 120
           Y+LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC+TYC+TYILSCITKH
Sbjct: 61  YFLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACITYCITYILSCITKH 120

Query: 121 SPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAI 180
           SPQYK+LMIGR+LGGIATSLLFSAFESWLVAEHNKRGF+QQWLS+TFSKAIFLGNGL+AI
Sbjct: 121 SPQYKVLMIGRVLGGIATSLLFSAFESWLVAEHNKRGFDQQWLSLTFSKAIFLGNGLIAI 180

Query: 181 LSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAA 240
           LSGLFGNLLVD+F+LGPVAPFDAAACFLAIGM II SSWTEN+GD SESKDLLTQFRGAA
Sbjct: 181 LSGLFGNLLVDTFALGPVAPFDAAACFLAIGMAIIFSSWTENFGDHSESKDLLTQFRGAA 240

Query: 241 VAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSL 300
           +AIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSL
Sbjct: 241 MAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSL 300

Query: 301 ASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCT 360
           ASRLMA S PRVESYMQIVFVVSS+SL+LPI T+FLVAPS  + GGISFSG LQLLGFCT
Sbjct: 301 ASRLMAHSSPRVESYMQIVFVVSSISLMLPIATNFLVAPSKARGGGISFSGCLQLLGFCT 360

Query: 361 FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVDAFPITVMFGMCS 420
           FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVC+VLYNV+AFPITVMFGMCS
Sbjct: 361 FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCIVLYNVNAFPITVMFGMCS 420

Query: 421 IFLLVASVLQRRLMVIADKPKTQEW-AMKERDAEAEPLNL 459
           IFL +AS+LQRRLMVI+DKPK ++W A+K+RD EAEPLN+
Sbjct: 421 IFLFMASILQRRLMVISDKPKAEDWTALKDRDTEAEPLNI 460

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356509214|ref|XP_003523346.1| PREDICTED: major facilitator superfamily domain-containing protein 5-like [Glycine max] Back     alignment and taxonomy information
>gi|356516093|ref|XP_003526731.1| PREDICTED: major facilitator superfamily domain-containing protein 5-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|224132678|ref|XP_002321382.1| predicted protein [Populus trichocarpa] gi|222868378|gb|EEF05509.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224120908|ref|XP_002318449.1| predicted protein [Populus trichocarpa] gi|118483361|gb|ABK93582.1| unknown [Populus trichocarpa] gi|222859122|gb|EEE96669.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225455290|ref|XP_002274807.1| PREDICTED: major facilitator superfamily domain-containing protein 5 [Vitis vinifera] gi|302143948|emb|CBI23053.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449456403|ref|XP_004145939.1| PREDICTED: major facilitator superfamily domain-containing protein 5-like [Cucumis sativus] gi|449497371|ref|XP_004160383.1| PREDICTED: major facilitator superfamily domain-containing protein 5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|18417054|ref|NP_567786.1| major facilitator protein [Arabidopsis thaliana] gi|13272473|gb|AAK17175.1|AF325107_1 putative protein [Arabidopsis thaliana] gi|16930439|gb|AAL31905.1|AF419573_1 AT4g27720/T29A15_210 [Arabidopsis thaliana] gi|15912261|gb|AAL08264.1| AT4g27720/T29A15_210 [Arabidopsis thaliana] gi|21536852|gb|AAM61184.1| putative transporter [Arabidopsis thaliana] gi|27764934|gb|AAO23588.1| At4g27720/T29A15_210 [Arabidopsis thaliana] gi|332659985|gb|AEE85385.1| major facilitator protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|385137884|gb|AFI41203.1| major facilitator protein, partial [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297803322|ref|XP_002869545.1| hypothetical protein ARALYDRAFT_913755 [Arabidopsis lyrata subsp. lyrata] gi|297315381|gb|EFH45804.1| hypothetical protein ARALYDRAFT_913755 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query459
TAIR|locus:2137707460 AT4G27720 [Arabidopsis thalian 1.0 0.997 0.813 8.8e-205
TAIR|locus:2019429462 AT1G64650 [Arabidopsis thalian 0.997 0.991 0.802 4.5e-201
TAIR|locus:2082971460 AT3G49310 [Arabidopsis thalian 1.0 0.997 0.789 1.1e-199
WB|WBGene00021870432 Y54G2A.4 [Caenorhabditis elega 0.644 0.685 0.495 2.6e-70
UNIPROTKB|Q6N075450 MFSD5 "Major facilitator super 0.884 0.902 0.342 2.1e-61
MGI|MGI:2145901450 Mfsd5 "major facilitator super 0.888 0.906 0.340 4.3e-61
UNIPROTKB|Q0VC03450 MFSD5 "Major facilitator super 0.884 0.902 0.340 5.5e-61
ZFIN|ZDB-GENE-040718-468481 mfsd5 "major facilitator super 0.429 0.409 0.4 4.2e-53
TAIR|locus:1005716655449 AT2G23093 "AT2G23093" [Arabido 0.551 0.563 0.245 2.8e-20
CGD|CAL0001498496 HGT18 [Candida albicans (taxid 0.357 0.330 0.313 6.4e-06
TAIR|locus:2137707 AT4G27720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1981 (702.4 bits), Expect = 8.8e-205, P = 8.8e-205
 Identities = 374/460 (81%), Positives = 403/460 (87%)

Query:     1 MEMFFYLVFXXXXXXXXXXELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYV 60
             ME+F+YLVF          ELSK NKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYV
Sbjct:     1 MEIFYYLVFGVLGLVVAALELSKNNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYV 60

Query:    61 YYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKH 120
             YYLYSTYGFGKG+IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC+TYILSCITKH
Sbjct:    61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKH 120

Query:   121 SPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAI 180
             SPQYK+LM+GR+LGGIATSLLFS+FESWLVAEHNKRGFEQQWLS+TFSKA+F GNGLVAI
Sbjct:   121 SPQYKVLMVGRVLGGIATSLLFSSFESWLVAEHNKRGFEQQWLSVTFSKAVFFGNGLVAI 180

Query:   181 LSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAA 240
             ++GLFGNLLVD+FSLGPVAPFDAAACFL IGM +ILSSWTENYGDPSE+KDLLTQFRGAA
Sbjct:   181 IAGLFGNLLVDTFSLGPVAPFDAAACFLTIGMAVILSSWTENYGDPSENKDLLTQFRGAA 240

Query:   241 VAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFXXXXXXXXXX 300
             VAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATF          
Sbjct:   241 VAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSL 300

Query:   301 XXXXXXXXPPRVESYMQIVFXXXXXXXXXPIVTSFLVAPSNVKSGGISFSGSLQLLGFCT 360
                      P+VESYMQIVF         PI+ +  +APS VK GGISFSG  QLLGFC 
Sbjct:   301 ASRLLSRSTPKVESYMQIVFLVSGAALLLPILMTLFIAPSKVKGGGISFSGCFQLLGFCI 360

Query:   361 FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVDAFPITVMFGMCS 420
             FEACVG+FWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV+AFPITVMFGMCS
Sbjct:   361 FEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVNAFPITVMFGMCS 420

Query:   421 IFLLVASVLQRRLMVIADKPKTQEWA-MKERDAEAEPLNL 459
             IFL VAS+LQRRLM+I DKPKT +W  ++ER+ E +PLN+
Sbjct:   421 IFLFVASLLQRRLMMIVDKPKTNDWTPLEERNTEEDPLNI 460
GO:0005886 "plasma membrane" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:2019429 AT1G64650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082971 AT3G49310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00021870 Y54G2A.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q6N075 MFSD5 "Major facilitator superfamily domain-containing protein 5" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2145901 Mfsd5 "major facilitator superfamily domain containing 5" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q0VC03 MFSD5 "Major facilitator superfamily domain-containing protein 5" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040718-468 mfsd5 "major facilitator superfamily domain containing 5" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
TAIR|locus:1005716655 AT2G23093 "AT2G23093" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
CGD|CAL0001498 HGT18 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q921Y4MFSD5_MOUSENo assigned EC number0.38190.80820.8244yesno
Q0VC03MFSD5_BOVINNo assigned EC number0.38190.80820.8244yesno
Q28E13MFSD5_XENTRNo assigned EC number0.33170.88450.8982yesno
Q5R542MFSD5_PONABNo assigned EC number0.37930.80820.8244yesno
Q6N075MFSD5_HUMANNo assigned EC number0.37870.87580.8933yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_XV0082
hypothetical protein (460 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query459
pfam05631354 pfam05631, DUF791, Protein of unknown function (DU 0.0
pfam07690346 pfam07690, MFS_1, Major Facilitator Superfamily 7e-08
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 2e-05
>gnl|CDD|114359 pfam05631, DUF791, Protein of unknown function (DUF791) Back     alignment and domain information 
 Score =  602 bits (1554), Expect = 0.0
 Identities = 281/355 (79%), Positives = 306/355 (86%), Gaps = 1/355 (0%)

Query: 4   FFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYL 63
           F+YLVFG L AVVA LEL K +KDR NT   FNSFKNNYLLVYS+MMAGDWLQGPYVYYL
Sbjct: 1   FYYLVFGGLAAVVALLELYKRSKDRSNTDPKFNSFKNNYLLVYSMMMAGDWLQGPYVYYL 60

Query: 64  YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQ 123
           YS+YGF KG+IG LFIAGFGSSMLFGTIVGSLADKQGRKRAC+TYC+ YILSCITKHSP 
Sbjct: 61  YSSYGFSKGDIGILFIAGFGSSMLFGTIVGSLADKQGRKRACLTYCILYILSCITKHSPN 120

Query: 124 YKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSG 183
           YK+LMIGR LGGIATSLLFSAFESWL+AEHNKRGF  QWLS TFSKA FLGNGLVAI+SG
Sbjct: 121 YKVLMIGRFLGGIATSLLFSAFESWLIAEHNKRGFSDQWLSTTFSKAAFLGNGLVAIISG 180

Query: 184 LFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAI 243
           LF NLL D F  GPVAPFDAAACFLAIGM IIL++W+ENYGDPS+ KDL  QF+ AA AI
Sbjct: 181 LFANLLADRFGFGPVAPFDAAACFLAIGMAIILNTWSENYGDPSDKKDLKEQFKVAAQAI 240

Query: 244 ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASR 303
           ASD  +  LG +QSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSS+A+R
Sbjct: 241 ASDPNVFCLGLVQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSVAAR 300

Query: 304 LMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGF 358
           L+ R   RVESYMQIVF++S+V L LPIVTS LV PS VK  G+S    +QLLGF
Sbjct: 301 LLQRH-LRVESYMQIVFLLSAVCLSLPIVTSVLVTPSKVKDDGLSLVFGIQLLGF 354

This family consists of several eukaryotic proteins of unknown function. Length = 354
>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 459
KOG4332454 consensus Predicted sugar transporter [Carbohydrat 100.0
PF05631354 DUF791: Protein of unknown function (DUF791); Inte 100.0
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 100.0
PRK10406432 alpha-ketoglutarate transporter; Provisional 99.97
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 99.97
PRK03545390 putative arabinose transporter; Provisional 99.97
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.97
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.97
PRK09705393 cynX putative cyanate transporter; Provisional 99.97
PRK09952438 shikimate transporter; Provisional 99.97
PRK10642490 proline/glycine betaine transporter; Provisional 99.97
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 99.97
TIGR01299 742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.97
PLN00028476 nitrate transmembrane transporter; Provisional 99.97
PRK15075434 citrate-proton symporter; Provisional 99.97
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 99.97
PRK10489417 enterobactin exporter EntS; Provisional 99.96
PRK10213394 nepI ribonucleoside transporter; Reviewed 99.96
PRK05122399 major facilitator superfamily transporter; Provisi 99.96
PRK11663434 regulatory protein UhpC; Provisional 99.96
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.96
TIGR00891405 2A0112 putative sialic acid transporter. 99.96
PRK15402406 multidrug efflux system translocase MdfA; Provisio 99.96
PRK12307426 putative sialic acid transporter; Provisional 99.96
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.96
PRK09874408 drug efflux system protein MdtG; Provisional 99.96
TIGR00900365 2A0121 H+ Antiporter protein. 99.96
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 99.96
PRK10091382 MFS transport protein AraJ; Provisional 99.96
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.96
PRK12382392 putative transporter; Provisional 99.96
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.96
PRK15403413 multidrug efflux system protein MdtM; Provisional 99.96
PRK10133438 L-fucose transporter; Provisional 99.96
PRK03893496 putative sialic acid transporter; Provisional 99.96
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.95
PRK14995495 methyl viologen resistance protein SmvA; Provision 99.95
PRK10077479 xylE D-xylose transporter XylE; Provisional 99.95
PRK10504471 putative transporter; Provisional 99.95
PRK15011393 sugar efflux transporter B; Provisional 99.95
PRK03633381 putative MFS family transporter protein; Provision 99.95
TIGR00893399 2A0114 d-galactonate transporter. 99.95
PRK11646400 multidrug resistance protein MdtH; Provisional 99.95
PRK11195393 lysophospholipid transporter LplT; Provisional 99.95
PRK03699394 putative transporter; Provisional 99.95
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.95
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.95
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.95
PRK10473392 multidrug efflux system protein MdtL; Provisional 99.95
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 99.95
PRK11652394 emrD multidrug resistance protein D; Provisional 99.94
TIGR00897402 2A0118 polyol permease family. This family of prot 99.94
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 99.94
PRK10054395 putative transporter; Provisional 99.94
PRK11043401 putative transporter; Provisional 99.94
TIGR00895398 2A0115 benzoate transport. 99.94
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.94
TIGR00898505 2A0119 cation transport protein. 99.94
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 99.94
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 99.94
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 99.94
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 99.93
TIGR00896355 CynX cyanate transporter. This family of proteins 99.93
TIGR00881379 2A0104 phosphoglycerate transporter family protein 99.93
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 99.93
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.93
TIGR00901356 2A0125 AmpG-related permease. 99.93
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.93
PRK11902402 ampG muropeptide transporter; Reviewed 99.93
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.93
PRK11010491 ampG muropeptide transporter; Validated 99.93
PRK09528420 lacY galactoside permease; Reviewed 99.92
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 99.92
KOG1330493 consensus Sugar transporter/spinster transmembrane 99.92
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.92
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.91
KOG2532466 consensus Permease of the major facilitator superf 99.91
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.91
KOG2533495 consensus Permease of the major facilitator superf 99.9
PRK10207489 dipeptide/tripeptide permease B; Provisional 99.9
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.9
KOG0569485 consensus Permease of the major facilitator superf 99.9
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.9
COG0738422 FucP Fucose permease [Carbohydrate transport and m 99.89
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.88
PRK09584500 tppB putative tripeptide transporter permease; Rev 99.88
KOG0254513 consensus Predicted transporter (major facilitator 99.88
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 99.88
TIGR00806511 rfc RFC reduced folate carrier. Proteins of the RF 99.88
COG2807395 CynX Cyanate permease [Inorganic ion transport and 99.87
KOG0252538 consensus Inorganic phosphate transporter [Inorgan 99.87
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.86
KOG3764464 consensus Vesicular amine transporter [Intracellul 99.86
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 99.86
TIGR00805633 oat sodium-independent organic anion transporter. 99.85
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 99.84
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 99.83
KOG2615451 consensus Permease of the major facilitator superf 99.82
PRK09669444 putative symporter YagG; Provisional 99.82
PF06609599 TRI12: Fungal trichothecene efflux pump (TRI12); I 99.8
PRK09848448 glucuronide transporter; Provisional 99.8
PRK10429473 melibiose:sodium symporter; Provisional 99.8
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 99.79
KOG0255521 consensus Synaptic vesicle transporter SVOP and re 99.79
TIGR00788468 fbt folate/biopterin transporter. The only functio 99.79
PF13347428 MFS_2: MFS/sugar transport protein 99.78
PTZ00207 591 hypothetical protein; Provisional 99.78
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.78
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 99.77
PRK15462493 dipeptide/tripeptide permease D; Provisional 99.77
COG2211467 MelB Na+/melibiose symporter and related transport 99.74
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 99.72
KOG2563480 consensus Permease of the major facilitator superf 99.72
PRK11462460 putative transporter; Provisional 99.68
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.66
COG2270438 Permeases of the major facilitator superfamily [Ge 99.64
COG3104498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 99.63
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 99.53
KOG2325488 consensus Predicted transporter/transmembrane prot 99.51
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.46
KOG2816463 consensus Predicted transporter ADD1 (major facili 99.38
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 99.34
PRK09528420 lacY galactoside permease; Reviewed 99.28
PRK15011393 sugar efflux transporter B; Provisional 99.27
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.24
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.18
PRK09874408 drug efflux system protein MdtG; Provisional 99.16
PRK09705393 cynX putative cyanate transporter; Provisional 99.16
PRK05122399 major facilitator superfamily transporter; Provisi 99.15
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.14
PRK03699394 putative transporter; Provisional 99.11
PRK03545390 putative arabinose transporter; Provisional 99.11
PRK10489417 enterobactin exporter EntS; Provisional 99.1
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.1
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.07
PRK03633381 putative MFS family transporter protein; Provision 99.07
PRK11663 434 regulatory protein UhpC; Provisional 99.07
TIGR00880141 2_A_01_02 Multidrug resistance protein. 99.07
PRK10054 395 putative transporter; Provisional 99.06
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 99.05
KOG3098461 consensus Uncharacterized conserved protein [Funct 99.04
TIGR00924 475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.03
PRK10642490 proline/glycine betaine transporter; Provisional 99.01
PRK09952438 shikimate transporter; Provisional 99.0
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 99.0
KOG3626 735 consensus Organic anion transporter [Secondary met 98.99
PRK12382392 putative transporter; Provisional 98.98
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 98.95
PRK11646 400 multidrug resistance protein MdtH; Provisional 98.94
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 98.93
TIGR00891 405 2A0112 putative sialic acid transporter. 98.93
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 98.93
TIGR02332 412 HpaX 4-hydroxyphenylacetate permease. This protein 98.93
PRK15462 493 dipeptide/tripeptide permease D; Provisional 98.93
PF07690 352 MFS_1: Major Facilitator Superfamily; InterPro: IP 98.92
TIGR00710 385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 98.92
TIGR00712 438 glpT glycerol-3-phosphate transporter. This model 98.91
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 98.91
TIGR01299 742 synapt_SV2 synaptic vesicle protein SV2. This mode 98.9
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 98.89
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 98.89
PRK11273 452 glpT sn-glycerol-3-phosphate transporter; Provisio 98.89
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 98.88
COG2271 448 UhpC Sugar phosphate permease [Carbohydrate transp 98.88
PRK10091382 MFS transport protein AraJ; Provisional 98.87
TIGR00900 365 2A0121 H+ Antiporter protein. 98.87
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 98.87
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 98.87
PRK10207 489 dipeptide/tripeptide permease B; Provisional 98.85
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 98.84
PRK10504 471 putative transporter; Provisional 98.84
PRK10213 394 nepI ribonucleoside transporter; Reviewed 98.84
TIGR00892455 2A0113 monocarboxylate transporter 1. 98.84
PRK10077479 xylE D-xylose transporter XylE; Provisional 98.83
TIGR00893 399 2A0114 d-galactonate transporter. 98.83
KOG0637498 consensus Sucrose transporter and related proteins 98.82
TIGR00897402 2A0118 polyol permease family. This family of prot 98.81
PRK12307 426 putative sialic acid transporter; Provisional 98.81
TIGR00895 398 2A0115 benzoate transport. 98.81
TIGR00881 379 2A0104 phosphoglycerate transporter family protein 98.8
PRK15075434 citrate-proton symporter; Provisional 98.8
PRK10473392 multidrug efflux system protein MdtL; Provisional 98.79
PRK11010491 ampG muropeptide transporter; Validated 98.78
PRK15402406 multidrug efflux system translocase MdfA; Provisio 98.78
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 98.78
PRK11043 401 putative transporter; Provisional 98.77
KOG1330 493 consensus Sugar transporter/spinster transmembrane 98.75
PRK09848448 glucuronide transporter; Provisional 98.74
TIGR00896355 CynX cyanate transporter. This family of proteins 98.74
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 98.74
PRK09584 500 tppB putative tripeptide transporter permease; Rev 98.74
PRK15403 413 multidrug efflux system protein MdtM; Provisional 98.73
PRK14995 495 methyl viologen resistance protein SmvA; Provision 98.72
PRK09669444 putative symporter YagG; Provisional 98.72
PRK11195393 lysophospholipid transporter LplT; Provisional 98.71
PRK11902402 ampG muropeptide transporter; Reviewed 98.71
PRK15034 462 nitrate/nitrite transport protein NarU; Provisiona 98.71
PF05977524 MFS_3: Transmembrane secretion effector; InterPro: 98.7
TIGR00711 485 efflux_EmrB drug resistance transporter, EmrB/QacA 98.68
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 98.67
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 98.67
PRK11652 394 emrD multidrug resistance protein D; Provisional 98.66
PRK03893 496 putative sialic acid transporter; Provisional 98.66
PLN00028 476 nitrate transmembrane transporter; Provisional 98.66
TIGR01272310 gluP glucose/galactose transporter. Disruption of 98.65
PF13347428 MFS_2: MFS/sugar transport protein 98.64
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 98.64
KOG2615 451 consensus Permease of the major facilitator superf 98.61
TIGR00887 502 2A0109 phosphate:H+ symporter. This model represen 98.6
PRK10406432 alpha-ketoglutarate transporter; Provisional 98.59
PRK10429473 melibiose:sodium symporter; Provisional 98.58
TIGR00903 368 2A0129 major facilitator 4 family protein. This fa 98.57
TIGR00901356 2A0125 AmpG-related permease. 98.56
TIGR00880141 2_A_01_02 Multidrug resistance protein. 98.55
KOG3764464 consensus Vesicular amine transporter [Intracellul 98.53
TIGR00885 410 fucP L-fucose:H+ symporter permease. This family d 98.53
PRK10133438 L-fucose transporter; Provisional 98.51
COG2270438 Permeases of the major facilitator superfamily [Ge 98.5
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 98.5
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 98.49
TIGR00805 633 oat sodium-independent organic anion transporter. 98.49
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 98.47
TIGR00898 505 2A0119 cation transport protein. 98.45
PRK11462460 putative transporter; Provisional 98.45
TIGR00894 465 2A0114euk Na(+)-dependent inorganic phosphate cotr 98.44
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 98.43
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 98.43
KOG3762618 consensus Predicted transporter [General function 98.42
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 98.4
COG2211467 MelB Na+/melibiose symporter and related transport 98.39
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 98.37
COG2807395 CynX Cyanate permease [Inorganic ion transport and 98.37
KOG0569 485 consensus Permease of the major facilitator superf 98.36
TIGR01301 477 GPH_sucrose GPH family sucrose/H+ symporter. This 98.36
PTZ00207 591 hypothetical protein; Provisional 98.3
TIGR00788468 fbt folate/biopterin transporter. The only functio 98.29
PF1283277 MFS_1_like: MFS_1 like family 98.29
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 98.28
COG3104 498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 98.23
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 98.23
COG0477338 ProP Permeases of the major facilitator superfamil 98.18
KOG3810433 consensus Micronutrient transporters (folate trans 98.11
KOG0254 513 consensus Predicted transporter (major facilitator 98.04
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 98.04
KOG3762618 consensus Predicted transporter [General function 98.04
TIGR00769472 AAA ADP/ATP carrier protein family. These proteins 98.03
KOG2532 466 consensus Permease of the major facilitator superf 97.99
KOG0252 538 consensus Inorganic phosphate transporter [Inorgan 97.99
KOG0255 521 consensus Synaptic vesicle transporter SVOP and re 97.98
KOG2325 488 consensus Predicted transporter/transmembrane prot 97.96
KOG3574510 consensus Acetyl-CoA transporter [Inorganic ion tr 97.79
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 97.79
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 97.73
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 97.71
COG0738422 FucP Fucose permease [Carbohydrate transport and m 97.7
PF00083 451 Sugar_tr: Sugar (and other) transporter; InterPro: 97.62
PF05631 354 DUF791: Protein of unknown function (DUF791); Inte 97.59
KOG2533 495 consensus Permease of the major facilitator superf 97.49
PF00854372 PTR2: POT family; InterPro: IPR000109 This entry r 97.32
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 97.21
KOG2563 480 consensus Permease of the major facilitator superf 96.9
KOG1479406 consensus Nucleoside transporter [Nucleotide trans 96.89
KOG3097390 consensus Predicted membrane protein [Function unk 96.79
KOG1237571 consensus H+/oligopeptide symporter [Amino acid tr 96.78
TIGR00939437 2a57 Equilibrative Nucleoside Transporter (ENT). 96.73
PF1283277 MFS_1_like: MFS_1 like family 96.22
KOG2816 463 consensus Predicted transporter ADD1 (major facili 96.22
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 96.17
PF13000544 Acatn: Acetyl-coenzyme A transporter 1; InterPro: 95.74
PF03219491 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 95.51
PF03137 539 OATP: Organic Anion Transporter Polypeptide (OATP) 95.47
PF03092 433 BT1: BT1 family; InterPro: IPR004324 Members of th 95.14
PF01770 412 Folate_carrier: Reduced folate carrier; InterPro: 95.02
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 94.9
TIGR00769 472 AAA ADP/ATP carrier protein family. These proteins 94.58
PF02487 402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 92.98
KOG0637 498 consensus Sucrose transporter and related proteins 92.65
KOG3880409 consensus Predicted small molecule transporter inv 92.08
PRK03612521 spermidine synthase; Provisional 91.8
PF00854 372 PTR2: POT family; InterPro: IPR000109 This entry r 90.36
COG0477 338 ProP Permeases of the major facilitator superfamil 90.23
KOG3098461 consensus Uncharacterized conserved protein [Funct 89.62
PF07672267 MFS_Mycoplasma: Mycoplasma MFS transporter; InterP 89.3
KOG3626 735 consensus Organic anion transporter [Secondary met 89.29
KOG3574 510 consensus Acetyl-CoA transporter [Inorganic ion tr 85.33
KOG1479 406 consensus Nucleoside transporter [Nucleotide trans 83.63
PF13386199 DsbD_2: Cytochrome C biogenesis protein transmembr 83.42
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=4.9e-40  Score=273.95  Aligned_cols=428  Identities=86%  Similarity=1.401  Sum_probs=376.4

Q ss_pred             CchHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccchhhHHHHHHHHHHHHhhhhccchhhhhhhccCCCccchhhHHHH
Q 012629            1 MEMFFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIA   80 (459)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~   80 (459)
                      |+.|||++++++.+.|..+|+++.++++....+.+.+++..++.++.+.+.++++++|++..+++.++....++|.++..
T Consensus         1 MevfyylvFggl~a~vagLELSk~nkdRintsssFnsFknnyllVyslmmAgDWLQgPYvYyLYstYgFgkG~IgqLfia   80 (454)
T KOG4332|consen    1 MEVFYYLVFGGLAAVVAGLELSKCNKDRINTSSSFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGDIGQLFIA   80 (454)
T ss_pred             CeeeehHHHHHHHHHHHHhhhhhcccccccCchhHHHHhhhHHHHHHHHHhhhhhcCceeeeeehhcCccCCccceeeec
Confidence            89999999999999999999999999999899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhccccchhcccCcchhhHHHHHHHHHHHHHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-cccccc
Q 012629           81 GFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFE  159 (459)
Q Consensus        81 ~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~  159 (459)
                      ++...++++.+.|.++|+-|||+.-+.-++.+.++++.-.+++|-.++++|.+.|+..+..+.+..+|++.|+ ++|++.
T Consensus        81 GfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~Fe  160 (454)
T KOG4332|consen   81 GFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFE  160 (454)
T ss_pred             ccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCCh
Confidence            9999999999999999999999999888888999888899999999999999999999999999999999999 689999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhh
Q 012629          160 QQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGA  239 (459)
Q Consensus       160 ~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (459)
                      ..|....++-....|+.+-.+++++.+..+.+..+.|...+|...+.+..+...++...|.|+.+++.+.++...+.+..
T Consensus       161 qqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~kdlltqf~ga  240 (454)
T KOG4332|consen  161 QQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSENKDLLTQFKGA  240 (454)
T ss_pred             HhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhhHHHHHHhhHh
Confidence            99999999989989999999999999999999999999999999998888888888889999999988888888888888


Q ss_pred             hHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCchhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHH
Q 012629          240 AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIV  319 (459)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~  319 (459)
                      .+.+..+++...+..+..++...+|.++..|.|....+..+.+-|.+++.+.+..++|+-+..++..|-..|....+.+.
T Consensus       241 a~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqiv  320 (454)
T KOG4332|consen  241 ARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIV  320 (454)
T ss_pred             HHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHH
Confidence            88899999999999999999999999999999999877777778999999999999999999888888766666667777


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhhhhHH
Q 012629          320 FVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIF  399 (459)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~  399 (459)
                      +.+....+.++...... .|.   ..+.    ..-+++++++-.+.|..+|..+-+-.+..|++.|++.+..+++..+.+
T Consensus       321 f~vs~a~l~Lpilt~~v-sP~---kes~----~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnif  392 (454)
T KOG4332|consen  321 FLVSIAALLLPILTSSV-SPS---KESP----SESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIF  392 (454)
T ss_pred             HHHHHHHHHHHHHHhcc-CCC---cCCc----hHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHh
Confidence            77777777776665543 221   1111    244788999999999999999999999999999999999999999998


Q ss_pred             HHHhhhc--cCcc--hhHHHHHHHHHHHHHHHHHHhhhhcc
Q 012629          400 VCVVLYN--VDAF--PITVMFGMCSIFLLVASVLQRRLMVI  436 (459)
Q Consensus       400 ~~~~l~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  436 (459)
                      +...++.  .+..  ....++.+|......+.+....+...
T Consensus       393 vClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~~~L~~v  433 (454)
T KOG4332|consen  393 VCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQRRLMTV  433 (454)
T ss_pred             hhhhheecccccCccccchhhhhhHHHHHHHHHHHHHHHHh
Confidence            8877754  2222  34578888888888776666555443

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism] Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG3097 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] Back     alignment and domain information
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only] Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] Back     alignment and domain information
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query459
2cfq_A417 Lactose permease; transport, transport mechanism, 1e-04
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Length = 417 Back     alignment and structure
 Score = 43.4 bits (102), Expect = 1e-04
 Identities = 50/414 (12%), Positives = 112/414 (27%), Gaps = 40/414 (9%)

Query: 36  NSFKNNYLLVYSLMMAGDWL-QGPYV----YYLYSTYGFGKGEIGQLFIAGFGSSMLFGT 90
              KN    ++ L     +   G Y      +L+      K + G +F A    S+LF  
Sbjct: 2   YYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQP 61

Query: 91  IVGSLADKQGRKR---------ACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLL 141
           + G L+DK G ++           +       +             ++G I  G   +  
Sbjct: 62  LFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAG 121

Query: 142 FSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPF 201
             A E+++     +  FE     +       LG  +V I+  +    +    S   +   
Sbjct: 122 APAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILA 181

Query: 202 DAAACFLAIGMVIILSSWTENYGDPSES-KDLLTQFRGAAVAIASDEKIALLGAIQSLFE 260
                           +        + S K  L  FR   +   S   +  +     +F+
Sbjct: 182 VLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLS-LYVIGVSCTYDVFD 240

Query: 261 GSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVF 320
                F   +             G++     L +      A  ++ R   +    + +  
Sbjct: 241 QQFANFFTSFFATGEQGTRVF--GYVTTMGELLNASIMFFAPLIINRIGGKN--ALLLAG 296

Query: 321 VVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYI 380
            + SV ++     +  +         +     L+ L                 K  +   
Sbjct: 297 TIMSVRIIGSSFATSALE--------VVI---LKTLHMFEV----PFLLVGCFKYITSQF 341

Query: 381 PEEARSTIMNFFRIPLNIFVCVVL-----YNVDAFPITVMFGMCSIFLLVASVL 429
                +TI             + +        ++      + +  +  L  +++
Sbjct: 342 EVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLI 395

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query459
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 100.0
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 100.0
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 99.96
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.96
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 99.95
2cfq_A417 Lactose permease; transport, transport mechanism, 99.92
2xut_A524 Proton/peptide symporter family protein; transport 99.9
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.14
3o7q_A 438 L-fucose-proton symporter; transporter, multi-PASS 99.12
4aps_A 491 DI-OR tripeptide H+ symporter; transport protein, 99.12
2xut_A 524 Proton/peptide symporter family protein; transport 98.95
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 98.88
2cfq_A417 Lactose permease; transport, transport mechanism, 98.82
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 98.63
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
Probab=100.00  E-value=2.1e-31  Score=257.30  Aligned_cols=313  Identities=13%  Similarity=0.146  Sum_probs=219.7

Q ss_pred             hhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HH---hhCCchHHHHH
Q 012629           54 WLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT---KHSPQYKILMI  129 (459)
Q Consensus        54 ~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~---~~~~~~~~l~~  129 (459)
                      ....|++|.+.+++|+++.++|++.+...+...++.+++|+++||+|||++++.+.++.+++. +.   ++++|++.+++
T Consensus        43 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  122 (438)
T 3o7q_A           43 NLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLV  122 (438)
T ss_dssp             HHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHHHHHHhccccccHHHHHH
Confidence            444888899999999999999999999999889999999999999999999999999999875 66   78899999999


Q ss_pred             HHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCc-------------
Q 012629          130 GRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLG-------------  196 (459)
Q Consensus       130 ~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~-------------  196 (459)
                      .|+++|++.+...+...+ ++.|+.+++++..... ...    .+..+|..+++.+++.+.+.....             
T Consensus       123 ~~~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~-~~~----~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~  196 (438)
T 3o7q_A          123 GLFIIAAGLGCLETAANP-FVTVLGPESSGHFRLN-LAQ----TFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQ  196 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHHSSCSTTHHHHHH-HHH----HHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHH
T ss_pred             HHHHHHhhHHHhhhhHHH-HHHHHcCchhHHHHHH-HHH----HHHHHHHHHHHHHHHHHHhcccccccccccccCCcch
Confidence            999999999999998866 8888833333322111 222    234455556666666655212222             


Q ss_pred             -----------cccchhhHHHHHHHHHHHHH-hhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhh
Q 012629          197 -----------PVAPFDAAACFLAIGMVIIL-SSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMY  264 (459)
Q Consensus       197 -----------w~~~f~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (459)
                                 ||++|++.+.+..+...+.. ...||++++++++++ .++.++..++++++|+++...+...+......
T Consensus       197 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (438)
T 3o7q_A          197 LSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAK-QGSFSASLSRLARIRHWRWAVLAQFCYVGAQT  275 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCTTTCCCCSS-TTSHHHHHHHHTTCSHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCccccccccccc-ccchhhhHHHHHhChHHHHHHHHHHHHHHHHH
Confidence                       78888766665555444333 234554433212111 12223455677888888887777666655544


Q ss_pred             hhhhhhcccc-CCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCC
Q 012629          265 TFVFLWTPAL-SPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPS  340 (459)
Q Consensus       265 ~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  340 (459)
                      . ...+.|.| .++.++.+.   +.......++.+++.++.+++.||++||+  .+..+..+..+...........    
T Consensus       276 ~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~----  348 (438)
T 3o7q_A          276 A-CWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHK--VLAAYALIAMALCLISAFAGGH----  348 (438)
T ss_dssp             H-HHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHH--HHHHHHHHHHHHHHHHHHCCHH----
T ss_pred             H-HHHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH--HHHHHHHHHHHHHHHHHHcCCc----
Confidence            4 57788988 777767654   56777778889999999999999999887  3444444444433333222221    


Q ss_pred             CCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhh
Q 012629          341 NVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR  393 (459)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~  393 (459)
                                  .......+.+++.+..+|..+++..|.+|++ ++++.++..
T Consensus       349 ------------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  388 (438)
T 3o7q_A          349 ------------VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV  388 (438)
T ss_dssp             ------------HHHHHHHHHHHHHTTHHHHHHHHHHSSCGGG-HHHHHHHHH
T ss_pred             ------------HHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccchhhHHH
Confidence                        3345567788888888999999999999977 666655444
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 459
d1pv7a_417 f.38.1.2 (A:) Lactose permease {Escherichia coli [ 6e-05
d1pw4a_447 f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es 4e-04
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

 Score = 42.8 bits (99), Expect = 6e-05
 Identities = 36/393 (9%), Positives = 98/393 (24%), Gaps = 18/393 (4%)

Query: 44  LVYSLMMAGDWLQGPYV-YYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRK 102
           L +           P+   +L+      K + G +F A    S+LF  + G L+DK G +
Sbjct: 14  LFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLR 73

Query: 103 RACVTYCLTY-ILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQ 161
           +  +       ++           +L    ++G I   +      +           +  
Sbjct: 74  KYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVS 133

Query: 162 WLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTE 221
             S        +   +   L      ++    +          A  LA+ +    +    
Sbjct: 134 RRSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILAVLLFFAKTDAPS 193

Query: 222 NYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI 281
           +    +      + F          +      ++  +     Y            +    
Sbjct: 194 SATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFAT 253

Query: 282 PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSN 341
                     + +M     AS +            +   +++   + + I+ S     + 
Sbjct: 254 GEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSAL 313

Query: 342 VKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMN-----FFRIPL 396
                 +                V        K  +        +TI       F ++ +
Sbjct: 314 EVVILKTLHM-----------FEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAM 362

Query: 397 NIFVCVVLYNVDAFPITVMFGMCSIFLLVASVL 429
                +     ++      + +  +  L  +++
Sbjct: 363 IFMSVLAGNMYESIGFQGAYLVLGLVALGFTLI 395
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query459
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 100.0
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.93
d1pw4a_ 447 Glycerol-3-phosphate transporter {Escherichia coli 99.17
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.15
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.9e-31  Score=252.88  Aligned_cols=341  Identities=11%  Similarity=0.075  Sum_probs=226.5

Q ss_pred             CCCCccchhhHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhh
Q 012629           30 NTSSAFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC  105 (459)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~  105 (459)
                      +.++.+++++|.++..+++......++    ....|.+ +|+|+|.+|+|++.+...+...++++++|+++||+|||+++
T Consensus        14 ~~~~~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~p~~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~   92 (447)
T d1pw4a_          14 EIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYL-VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL   92 (447)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHT-TSSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred             hhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH
Confidence            344556777888888777777766554    4444544 56899999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHH-HHhhC----CchHHHHHHHHHHHhHhhhhhhhhhhhhhhhccc---cccchhhHHHHHHHHHHHHHHH
Q 012629          106 VTYCLTYILSC-ITKHS----PQYKILMIGRILGGIATSLLFSAFESWLVAEHNK---RGFEQQWLSITFSKAIFLGNGL  177 (459)
Q Consensus       106 ~~~~~~~~~~~-l~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~---r~~~~~~~~~~~~~~~~~g~~~  177 (459)
                      ..+.++.+++. +++++    ++++.+++.|++.|++.+...+.... ++.|+.+   |++..+    ..+.    +..+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~i~~~~~~~~r~~~~~----~~~~----~~~~  163 (447)
T d1pw4a_          93 PAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGR-TMVHWWSQKERGGIVS----VWNC----AHNV  163 (447)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHH-HHHTTCTTTHHHHHHH----HHHH----HHHH
T ss_pred             HHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHhhhhhhhHHHH-HHHHHHHhhccccccc----cccc----ccch
Confidence            99999988875 55554    57889999999999999999888866 8888733   333333    2222    3334


Q ss_pred             HHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCC-----Cc-----hhhHHHH-------HHhhh
Q 012629          178 VAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP-----SE-----SKDLLTQ-------FRGAA  240 (459)
Q Consensus       178 g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~-----~~-----~~~~~~~-------~~~~~  240 (459)
                      |..+++.++....... .+||..|++.+.+..+..++.+...++.+++.     ++     .++..++       .....
T Consensus       164 g~~i~~~~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (447)
T d1pw4a_         164 GGGIPPLLFLLGMAWF-NDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFM  242 (447)
T ss_dssp             HHTSHHHHHHHHHHHT-CCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTCCC-------------CCTHHHH
T ss_pred             hhhhhhhhhhhHhhhh-hcccccchhhhhhHHHHHHHHHHhcccchhhcccchhhhhhhhcccchhhccccccchhhHHH
Confidence            4455555444433322 25677788777776666555554444322110     00     0000000       01123


Q ss_pred             HHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHH
Q 012629          241 VAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQ  317 (459)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~  317 (459)
                      +..++++.++.......+.....+. ...+.|.|.++..+.+.   +.......+..+++.++.+++.||++|++.... 
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-  320 (447)
T d1pw4a_         243 QYVLPNKLLWYIAIANVFVYLLRYG-ILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT-  320 (447)
T ss_dssp             HHTSSCHHHHHHHHHHHHHHHHHHH-HHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHH-
T ss_pred             HHHHcCchHHHHHHHhhhhhhhhhc-chhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhhccccccccc-
Confidence            4567778877777766666666555 57788999888777654   566677778899999999999999988763211 


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629          318 IVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI  394 (459)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~  394 (459)
                       ...................      ..+    .+...+..++.+++.+...+....+..|.+|++.|+++.|+.+.
T Consensus       321 -~~~~~~~~~~~~~~~~~~~------~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~  386 (447)
T d1pw4a_         321 -GVFFMTLVTIATIVYWMNP------AGN----PTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGL  386 (447)
T ss_dssp             -HHHHHHHHHHHHHHTTSCC------TTC----HHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHH
T ss_pred             -cchhHHHHHHHHHHHHhcc------ccc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence             1111111111111111110      011    13555666777777777788899999999999999999987765
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure