Citrus Sinensis ID: 012660


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------46
MSLFFYITWVLVLSSKFYLASAETSDKIGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNHEIIDIASKQKVADQWVHDNVLSFYPETMIRFILVGNEILSQSSEEYKQIWKNLVPAMHRIKKCLNAHNIHNIKVGTPLAMDIFQTTFPPSNGTFRSDISASVMEPLLQFLNRTKSFFFLDVYPYFAWSTNPKTISLDFALLRETNTSYTDPNSGLVYTNLLDQMLDSVIFAMAKLGYSDIRLAISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTSKPALGTPARPGSIIPTFIFSLYDENQKTGPGTERHWGMLHGNGVPIYEIDLSGNRSLSQYRPLPLAHNNVPYKGKVWCVVARGADLLALTSALGYACGQGNGTCDALVPGQRCYQPLSLYWHASYAFSSYWAKFMGKGATCYFNGLAQQTIINPSEF
ccHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccHHHHHHHHHHccccEEEEccccHHHHHHHcccccEEEEEccccHHHHHHccHHHHHHHHHHccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHcccccEEcccccEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEEccccccccccccEEEcccccccEEEEEEEcccccccccccccccccccccccEEEEEccccccHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccEEEEccccccc
cHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHccccEEEEEEccHHHHHHHccHHHHHHHHHHHcHccccccEEEEEEEcccEccccccccHcHHHHHHHHHHHHHHHHHHcccccEEEccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHccccEEEEccccEEcccccccccccEEEEccccccEEccccccEEccHHHHHHHHHHHHHHHcccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEEEccccccccccHHHcccEcccccEEEEEEcccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccEEEEEEcccccc
MSLFFYITWVLVLSSKFYLASaetsdkiginygklgsnlpssyqsIESIKFLQagsvkiydanpEILKLLSGTDLKVSIMVQNHEIIDIASKQKVADQWvhdnvlsfypETMIRFILVGNEILSQSSEEYKQIWKNLVPAMHRIKKCLNAhnihnikvgtplamdifqttfppsngtfrsdisasVMEPLLQFLNRTksfffldvypyfawstnpktisLDFALLretntsytdpnsglvYTNLLDQMLDSVIFAMAKLGYSDIRLAisetgwpnagdfdqigANIYNAATYNRNLIKkmtskpalgtparpgsiiptfifslydenqktgpgterhwgmlhgngvpiyeidlsgnrslsqyrplplahnnvpykgKVWCVVARGADLLALTSALGYacgqgngtcdalvpgqrcyqplslywhASYAFSSYWAKFMGkgatcyfnglaqqtiinpsef
MSLFFYITWVLVLSSKFYLASAETSDKIGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNHEIIDIASKQKVADQWVHDNVLSFYPETMIRFILVGNEILSQSSEEYKQIWKNLVPAMHRIKKCLNAHNIHNIKVGTPLAMDIFQTTFPPSNGTFRSDISASVMEPLLQFLNRTKSFFFLDVYPYFAWSTNPKTISLDFALLRETNtsytdpnsgLVYTNLLDQMLDSVIFAMAKLGYSDIRLAISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTSKPALGTPARPGSIIPTFIFSLYDENQKTGPGTERHWGMLHGNGVPIYEIDLSGNRSLSQYRPLPLAHNNVPYKGKVWCVVARGADLLALTSALGYACGQGNGTCDALVPGQRCYQPLSLYWHASYAFSSYWAKFMGKGATCYFNGLAQQTIINPSEF
MSLFFYITWVLVLSSKFYLASAETSDKIGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNHEIIDIASKQKVADQWVHDNVLSFYPETMIRFILVGNEILSQSSEEYKQIWKNLVPAMHRIKKCLNAHNIHNIKVGTPLAMDIFQTTFPPSNGTFRSDISASVMEPLLQFLNRTKSFFFLDVYPYFAWSTNPKTISLDFALLRETNTSYTDPNSGLVYTNLLDQMLDSVIFAMAKLGYSDIRLAISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTSKPALGTPARPGSIIPTFIFSLYDENQKTGPGTERHWGMLHGNGVPIYEIDLSGNRSLSQYRPLPLAHNNVPYKGKVWCVVARGADLLALTSALGYACGQGNGTCDALVPGQRCYQPLSLYWHASYAFSSYWAKFMGKGATCYFNGLAQQTIINPSEF
**LFFYITWVLVLSSKFYLASAETSDKIGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNHEIIDIASKQKVADQWVHDNVLSFYPETMIRFILVGNEILSQSSEEYKQIWKNLVPAMHRIKKCLNAHNIHNIKVGTPLAMDIFQTTFPPSNGTFRSDISASVMEPLLQFLNRTKSFFFLDVYPYFAWSTNPKTISLDFALLRETNTSYTDPNSGLVYTNLLDQMLDSVIFAMAKLGYSDIRLAISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTS**ALGTPARPGSIIPTFIFSLYDENQKTGPGTERHWGMLHGNGVPIYEIDLSGNRSLSQYRPLPLAHNNVPYKGKVWCVVARGADLLALTSALGYACGQGNGTCDALVPGQRCYQPLSLYWHASYAFSSYWAKFMGKGATCYFNGLAQQTII*****
*SLFFYITWVLVLSSKFYLASAETSDKIGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNHEIIDIASKQKVADQWVHDNVLSFYPETMIRFILVGNEILSQSSEEYKQIWKNLVPAMHRIKKCLNAHNIHNIKVGTPLAMDIFQTTFPPSNGTFRSDISASVMEPLLQFLNRTKSFFFLDVYPYFAWSTNPKTISLDFALLRETNTSYTDPNSGLVYTNLLDQMLDSVIFAMAKLGYSDIRLAISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTS******P**PGSIIPTFIFSLYDENQK**PGTERHWGMLHGNGVPIYEIDL************************VWCVVARGADLLALTSALGYACGQGNGTCDALVPGQRCYQPLSLYWHASYAFSSYWAKFMGKGATCYFNGLAQQTII*****
MSLFFYITWVLVLSSKFYLASAETSDKIGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNHEIIDIASKQKVADQWVHDNVLSFYPETMIRFILVGNEILSQSSEEYKQIWKNLVPAMHRIKKCLNAHNIHNIKVGTPLAMDIFQTTFPPSNGTFRSDISASVMEPLLQFLNRTKSFFFLDVYPYFAWSTNPKTISLDFALLRETNTSYTDPNSGLVYTNLLDQMLDSVIFAMAKLGYSDIRLAISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTSKPALGTPARPGSIIPTFIFSLYDENQKTGPGTERHWGMLHGNGVPIYEIDLSGNRSLSQYRPLPLAHNNVPYKGKVWCVVARGADLLALTSALGYACGQGNGTCDALVPGQRCYQPLSLYWHASYAFSSYWAKFMGKGATCYFNGLAQQTIINPSEF
MSLFFYITWVLVLSSKFYLASAETSDKIGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNHEIIDIASKQKVADQWVHDNVLSFYPETMIRFILVGNEILSQSSEEYKQIWKNLVPAMHRIKKCLNAHNIHNIKVGTPLAMDIFQTTFPPSNGTFRSDISASVMEPLLQFLNRTKSFFFLDVYPYFAWSTNPKTISLDFALLRETNTSYTDPNSGLVYTNLLDQMLDSVIFAMAKLGYSDIRLAISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTSKPALGTPARPGSIIPTFIFSLYDENQKTGPGTERHWGMLHGNGVPIYEIDLSGN******************KGKVWCVVARGADLLALTSALGYACGQGNGTCDALVPGQRCYQPLSLYWHASYAFSSYWAKFMGKGATCYFNGLAQQTIINPS**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSLFFYITWVLVLSSKFYLASAETSDKIGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNHEIIDIASKQKVADQWVHDNVLSFYPETMIRFILVGNEILSQSSEEYKQIWKNLVPAMHRIKKCLNAHNIHNIKVGTPLAMDIFQTTFPPSNGTFRSDISASVMEPLLQFLNRTKSFFFLDVYPYFAWSTNPKTISLDFALLRETNTSYTDPNSGLVYTNLLDQMLDSVIFAMAKLGYSDIRLAISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTSKPALGTPARPGSIIPTFIFSLYDENQKTGPGTERHWGMLHGNGVPIYEIDLSGNRSLSQYRPLPLAHNNVPYKGKVWCVVARGADLLALTSALGYACGQGNGTCDALVPGQRCYQPLSLYWHASYAFSSYWAKFMGKGATCYFNGLAQQTIINPSEF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query459 2.2.26 [Sep-21-2011]
Q06915478 Probable glucan endo-1,3- no no 0.984 0.945 0.580 1e-160
O65399511 Glucan endo-1,3-beta-gluc no no 0.895 0.804 0.375 3e-76
Q94CD8505 Glucan endo-1,3-beta-gluc no no 0.897 0.815 0.367 1e-74
Q9FJU9506 Glucan endo-1,3-beta-gluc no no 0.917 0.832 0.339 2e-72
Q9ZU91501 Glucan endo-1,3-beta-gluc no no 0.901 0.826 0.347 1e-71
Q9C7U5505 Glucan endo-1,3-beta-gluc no no 0.912 0.829 0.345 3e-71
Q9M069504 Glucan endo-1,3-beta-gluc no no 0.943 0.859 0.361 2e-70
Q94G86460 Glucan endo-1,3-beta-D-gl N/A no 0.928 0.926 0.349 3e-70
Q8VYE5534 Glucan endo-1,3-beta-gluc no no 0.954 0.820 0.326 1e-69
Q8L868426 Glucan endo-1,3-beta-gluc no no 0.753 0.812 0.379 2e-61
>sp|Q06915|EA6_ARATH Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1 Back     alignment and function desciption
 Score =  565 bits (1457), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 273/470 (58%), Positives = 343/470 (72%), Gaps = 18/470 (3%)

Query: 1   MSLF-FYITWVLVLSSKFYLASA-------------ETSDKIGINYGKLGSNLPSSYQSI 46
           MSL  F++  +LV SS    A+              + + KIGINYG+ G+NLPS YQSI
Sbjct: 1   MSLLAFFLFTILVFSSSCCSATRFQGHRYMQRKTMLDLASKIGINYGRRGNNLPSPYQSI 60

Query: 47  ESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNHEIIDIASKQKVADQWVHDNVLS 106
             IK ++AG VK+YDA+PE L LLS T+L V+I V NH+I  ++S Q +AD+WV  N+L 
Sbjct: 61  NFIKSIKAGHVKLYDADPESLTLLSQTNLYVTITVPNHQITALSSNQTIADEWVRTNILP 120

Query: 107 FYPETMIRFILVGNEILSQSSEEYKQIWKNLVPAMHRIKKCLNAHNIHNIKVGTPLAMDI 166
           +YP+T IRF+LVGNEILS +S     +  NLVPAM +I   L  H IHNIKVGTPLAMD 
Sbjct: 121 YYPQTQIRFVLVGNEILSYNS---GNVSVNLVPAMRKIVNSLRLHGIHNIKVGTPLAMDS 177

Query: 167 FQTTFPPSNGTFRSDISASVMEPLLQFLNRTKSFFFLDVYPYFAWSTNPKTISLDFALLR 226
            +++FPPSNGTFR +I+  VM PLL+FLN T S+FFL+V+PYF WS NP   SLDFAL  
Sbjct: 178 LRSSFPPSNGTFREEITGPVMLPLLKFLNGTNSYFFLNVHPYFRWSRNPMNTSLDFALF- 236

Query: 227 ETNTSYTDPNSGLVYTNLLDQMLDSVIFAMAKLGYSDIRLAISETGWPNAGDFDQIGANI 286
           + +++YTDP +GLVY NLLDQMLDSV+FAM KLGY  +RLAISETGWPN GD D+ GANI
Sbjct: 237 QGHSTYTDPQTGLVYRNLLDQMLDSVLFAMTKLGYPHMRLAISETGWPNFGDIDETGANI 296

Query: 287 YNAATYNRNLIKKMTSKPALGTPARPGSIIPTFIFSLYDENQKTGPGTERHWGMLHGNGV 346
            NAATYNRNLIKKM++ P +GTP+RPG  IPTF+FSL++ENQK+G GT+RHWG+LH +G 
Sbjct: 297 LNAATYNRNLIKKMSASPPIGTPSRPGLPIPTFVFSLFNENQKSGSGTQRHWGILHPDGS 356

Query: 347 PIYEIDLSGNRSLSQYRPLPLAHNNVPYKGKVWCVVARGADLLALTSALGYACGQGNGTC 406
           PIY++D +G   L+ + PLP   NNVPYKG+VWCV   GA+   L   L  AC Q N TC
Sbjct: 357 PIYDVDFTGQTPLTGFNPLPKPTNNVPYKGQVWCVPVEGANETELEETLRMACAQSNTTC 416

Query: 407 DALVPGQRCYQPLSLYWHASYAFSSYWAKFMGKGATCYFNGLAQQTIINP 456
            AL PG+ CY+P+S+YWHASYA +SYWA+F  +   C+FNGLA +T  NP
Sbjct: 417 AALAPGRECYEPVSIYWHASYALNSYWAQFRNQSIQCFFNGLAHETTTNP 466




Implicated in the defense of plants against pathogens.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 3EC: 9
>sp|O65399|E131_ARATH Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=3 Back     alignment and function description
>sp|Q94CD8|E134_ARATH Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1 Back     alignment and function description
>sp|Q9FJU9|E1313_ARATH Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZU91|E133_ARATH Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2 Back     alignment and function description
>sp|Q9C7U5|E132_ARATH Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2 Back     alignment and function description
>sp|Q9M069|E137_ARATH Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2 Back     alignment and function description
>sp|Q94G86|ALL9_OLEEU Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1 Back     alignment and function description
>sp|Q8VYE5|E1312_ARATH Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1 Back     alignment and function description
>sp|Q8L868|E1311_ARATH Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query459
224055819462 predicted protein [Populus trichocarpa] 0.982 0.976 0.673 0.0
359478001467 PREDICTED: probable glucan endo-1,3-beta 0.971 0.955 0.651 1e-179
359478025474 PREDICTED: LOW QUALITY PROTEIN: probable 0.982 0.951 0.655 1e-174
297831154476 hypothetical protein ARALYDRAFT_479892 [ 0.984 0.949 0.630 1e-169
21592541476 beta-1,3-glucanase, putative [Arabidopsi 0.938 0.905 0.652 1e-167
15229514476 O-Glycosyl hydrolases family 17 protein 0.938 0.905 0.652 1e-167
116831230477 unknown [Arabidopsis thaliana] 0.938 0.903 0.652 1e-167
449459874461 PREDICTED: probable glucan endo-1,3-beta 0.958 0.954 0.616 1e-165
255559202463 Glucan endo-1,3-beta-glucosidase precurs 0.901 0.894 0.665 1e-165
449453302466 PREDICTED: probable glucan endo-1,3-beta 0.943 0.929 0.619 1e-164
>gi|224055819|ref|XP_002298669.1| predicted protein [Populus trichocarpa] gi|222845927|gb|EEE83474.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  655 bits (1690), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/456 (67%), Positives = 368/456 (80%), Gaps = 5/456 (1%)

Query: 3   LFFYITWVLVLSSKFYLASAETSDKIGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDA 62
           +FF+     ++S  F L  A T  KIG+NYG+ G+NLPS+Y+SIE ++ ++AGSVK+YDA
Sbjct: 2   VFFF----RLISQSFTLTDAITLRKIGLNYGRFGNNLPSAYESIEILRSMKAGSVKLYDA 57

Query: 63  NPEILKLLSGTDLKVSIMVQNHEIIDIASKQKVADQWVHDNVLSFYPETMIRFILVGNEI 122
           NPEIL+LL+ T++ VSIMV+N EII+IA+ Q  A++WV DNVL +YP+T+IR ILVGNE+
Sbjct: 58  NPEILRLLARTNIHVSIMVRNDEIINIAANQTTANKWVEDNVLRYYPDTIIRTILVGNEV 117

Query: 123 LSQSSEEYKQIWKNLVPAMHRIKKCLNAHNIHNIKVGTPLAMDIFQTTFPPSNGTFRSDI 182
           LS SS+  KQIW +LVPAM RIK  L A +I NIKVGTPLAMD+ QT FPPSNGTFRSDI
Sbjct: 118 LSYSSDAGKQIWNHLVPAMRRIKISLRAQDIRNIKVGTPLAMDVLQTAFPPSNGTFRSDI 177

Query: 183 SASVMEPLLQFLNRTKSFFFLDVYPYFAWSTNPKTISLDFALLRETNTSYTDPNSGLVYT 242
           S SVM PLL FLN TKSFFF+D YPYF WS NP  ISL+FAL  ++N  YTDP +GLVYT
Sbjct: 178 STSVMVPLLNFLNSTKSFFFIDAYPYFPWSANPINISLNFALF-QSNIKYTDPGTGLVYT 236

Query: 243 NLLDQMLDSVIFAMAKLGYSDIRLAISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTS 302
           NLLDQMLDS++FAM KLGY D+RL+I+ETGWPNAGD D+ GANI NAATYNRNL++KMT+
Sbjct: 237 NLLDQMLDSLVFAMTKLGYPDVRLSIAETGWPNAGDIDEAGANIKNAATYNRNLVRKMTA 296

Query: 303 KPALGTPARPGSIIPTFIFSLYDENQKTGPGTERHWGMLHGNGVPIYEIDLSGNRSLSQY 362
               GTPARPGS+IPTFIF+LYDEN+KTGPGTERHWG+LH NG  IY+IDL+G R+ S Y
Sbjct: 297 SNPTGTPARPGSLIPTFIFALYDENRKTGPGTERHWGLLHPNGTSIYQIDLTGKRASSDY 356

Query: 363 RPLPLAHNNVPYKGKVWCVVARGADLLALTSALGYACGQGNGTCDALVPGQRCYQPLSLY 422
             LP A NNVPYKGK+WC+ A   +L  L SAL +AC QGNGTCD+L PG+ CY+PLS+ 
Sbjct: 357 ETLPPAQNNVPYKGKLWCIAAPEVNLTELESALTFACNQGNGTCDSLTPGKECYEPLSVT 416

Query: 423 WHASYAFSSYWAKFMGKGATCYFNGLAQQTIINPSE 458
           WHASYAFSSYWAKF  +GA CYFNGLAQQT  NPS 
Sbjct: 417 WHASYAFSSYWAKFRSQGANCYFNGLAQQTTSNPSR 452




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478001|ref|XP_003632052.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like [Vitis vinifera] gi|296089651|emb|CBI39470.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359478025|ref|XP_003632055.1| PREDICTED: LOW QUALITY PROTEIN: probable glucan endo-1,3-beta-glucosidase A6-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297831154|ref|XP_002883459.1| hypothetical protein ARALYDRAFT_479892 [Arabidopsis lyrata subsp. lyrata] gi|297329299|gb|EFH59718.1| hypothetical protein ARALYDRAFT_479892 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|21592541|gb|AAM64490.1| beta-1,3-glucanase, putative [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15229514|ref|NP_189019.1| O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] gi|9293950|dbj|BAB01853.1| beta-1,3-glucanase [Arabidopsis thaliana] gi|91806463|gb|ABE65959.1| glycosyl hydrolase family 17 protein [Arabidopsis thaliana] gi|332643290|gb|AEE76811.1| O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|116831230|gb|ABK28569.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449459874|ref|XP_004147671.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255559202|ref|XP_002520622.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] gi|223540183|gb|EEF41758.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449453302|ref|XP_004144397.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like [Cucumis sativus] gi|449520485|ref|XP_004167264.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query459
TAIR|locus:2095228476 AT3G23770 [Arabidopsis thalian 0.938 0.905 0.652 1.9e-154
TAIR|locus:2129376478 MEE48 "maternal effect embryo 0.936 0.899 0.610 5e-147
TAIR|locus:2098585460 AT3G07320 [Arabidopsis thalian 0.978 0.976 0.549 8.3e-138
TAIR|locus:2056519472 AT2G05790 [Arabidopsis thalian 0.973 0.947 0.372 2.8e-82
TAIR|locus:2161710465 AT5G55180 [Arabidopsis thalian 0.965 0.952 0.353 5.4e-79
TAIR|locus:2116327455 AT4G26830 [Arabidopsis thalian 0.954 0.962 0.344 6.3e-76
TAIR|locus:2092855505 AT3G13560 [Arabidopsis thalian 0.897 0.815 0.371 1.7e-73
TAIR|locus:2139519504 AT4G34480 [Arabidopsis thalian 0.958 0.873 0.355 7.5e-73
TAIR|locus:2118339534 AT4G29360 [Arabidopsis thalian 0.967 0.831 0.334 1.4e-71
TAIR|locus:2164991506 AT5G56590 [Arabidopsis thalian 0.917 0.832 0.337 1.3e-70
TAIR|locus:2095228 AT3G23770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1506 (535.2 bits), Expect = 1.9e-154, P = 1.9e-154
 Identities = 282/432 (65%), Positives = 336/432 (77%)

Query:    25 SDKIGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNH 84
             + +IGINYGKLG+NLP  YQSI  IK ++AG VK+YDA+PE LKLLS T+L V+IMV N+
Sbjct:    34 ASRIGINYGKLGNNLPFPYQSINLIKTIKAGHVKLYDADPETLKLLSTTNLYVTIMVPNN 93

Query:    85 EIIDIASKQKVADQWVHDNVLSFYPETMIRFILVGNEILSQSSEEYKQIWKNLVPAMHRI 144
             +II I + Q  AD WV  NVL F+P+T IRF+LVGNE+LS SS++ KQIW NLVPAM ++
Sbjct:    94 QIISIGADQAAADNWVATNVLPFHPQTRIRFVLVGNEVLSYSSDQDKQIWANLVPAMRKV 153

Query:   145 KKCLNAHNIHNIKVGTPLAMDIFQTTFPPSNGTFRSDISASVMEPLLQFLNRTKSFFFLD 204
                L A  IHNIKVGTPLAMD  +++FPPS+GTFR DI+  VM PLL+FLN T SFFFLD
Sbjct:   154 VNSLRARGIHNIKVGTPLAMDALRSSFPPSSGTFREDIAVPVMLPLLKFLNGTNSFFFLD 213

Query:   205 VYPYFAWSTNPKTISLDFALLRETNTSYTDPNSGLVYTNLLDQMLDSVIFAMAKLGYSDI 264
             VYPYF WST+P    LDFAL  E+N++YTDP +GLVYTNLLDQMLDSVIFAM KLGY +I
Sbjct:   214 VYPYFPWSTDPVNNHLDFALF-ESNSTYTDPQTGLVYTNLLDQMLDSVIFAMTKLGYPNI 272

Query:   265 RLAISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTSKPALGTPARPGSIIPTFIFSLY 324
              LAISETGWPN GD  + GANI NAATYNRNLIKKMT+ P LGTPAR G+ IPTF+FSL+
Sbjct:   273 SLAISETGWPNDGDIHETGANIVNAATYNRNLIKKMTANPPLGTPARRGAPIPTFLFSLF 332

Query:   325 DENQKTGPGTERHWGMLHGNGVPIYEIDLSGNRSLSQYRPLPLAHNNVPYKGKVWCVVAR 384
             +ENQK G GTERHWG+L+ +G PIY+ID SG RS S +  LP   NNVP+KG VWCV   
Sbjct:   333 NENQKPGSGTERHWGILNPDGTPIYDIDFSGRRSFSGFDSLPKPSNNVPFKGNVWCVAVD 392

Query:   385 GADLLALTSALGYACGQGNGTCDALVPGQRCYQPLSLYWHASYAFSSYWAKFMGKGATCY 444
             GAD   L  AL +ACG+ N TC AL PG  CY P+++ WHASYAFSSYWA+F  + + CY
Sbjct:   393 GADEAELGQALNFACGRSNATCAALAPGGECYAPVTVTWHASYAFSSYWAQFRNQSSQCY 452

Query:   445 FNGLAQQTIINP 456
             FNGLA++T  NP
Sbjct:   453 FNGLARETTTNP 464




GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005886 "plasma membrane" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
GO:0010584 "pollen exine formation" evidence=RCA
TAIR|locus:2129376 MEE48 "maternal effect embryo arrest 48" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2098585 AT3G07320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056519 AT2G05790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161710 AT5G55180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116327 AT4G26830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092855 AT3G13560 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139519 AT4G34480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118339 AT4G29360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164991 AT5G56590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.390.824
3rd Layer3.2.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.I.3311.1
hypothetical protein (462 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query459
pfam00332310 pfam00332, Glyco_hydro_17, Glycosyl hydrolases fam 1e-113
smart0076885 smart00768, X8, Possibly involved in carbohydrate 3e-26
pfam0798377 pfam07983, X8, X8 domain 4e-15
>gnl|CDD|215863 pfam00332, Glyco_hydro_17, Glycosyl hydrolases family 17 Back     alignment and domain information
 Score =  334 bits (858), Expect = e-113
 Identities = 131/326 (40%), Positives = 187/326 (57%), Gaps = 18/326 (5%)

Query: 28  IGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNHEII 87
           IG+ YG  G+NLPS    +   K      ++IYD + + LK L G+ + V + V N ++ 
Sbjct: 1   IGVCYGVKGNNLPSPSDVVSLYKSNNIRRMRIYDPDTKALKALRGSGINVILGVPNDDLA 60

Query: 88  DIASKQKVADQWVHDNVLSFYPETMIRFILVGNEILSQSSEEYKQIWKNLVPAMHRIKKC 147
           ++A  Q  A  WV DNV  + P+  IR+I VGNE+   +++        LVPAM  I+  
Sbjct: 61  ELAGSQSNAASWVQDNVRPYAPKVKIRYIAVGNEVSPGTTQ------SFLVPAMRNIRNA 114

Query: 148 LNAHNIHN-IKVGTPLAMDIFQTTFPPSNGTFRSDISASVMEPLLQFLNRTKSFFFLDVY 206
           L A  + N IKV T +  DI   +FPPS G+FR +   S M+P++ FL  T +    +VY
Sbjct: 115 LTAAGLGNKIKVSTSVRFDILGNSFPPSYGSFRVET-RSFMDPIIVFLAGTNAPLLANVY 173

Query: 207 PYFAWSTNPKTISLDFALLRETNTSYTDPNSGLVYTNLLDQMLDSVIFAMAKLGYSDIRL 266
           PYFA+S NP+ ISL++AL +   T       GL Y NL D M+D+V  A+ K G   + +
Sbjct: 174 PYFAYSNNPRDISLNYALFQPGTTVVDG---GLGYQNLFDAMVDAVYAALEKAGGPSVEV 230

Query: 267 AISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTSKPALGTPARPGSIIPTFIFSLYDE 326
            +SE+GWP+ G F    A I NA TYN+NLI  +      GTP RPG  I T++F+++DE
Sbjct: 231 VVSESGWPSDGGF---AATIENARTYNQNLINHVKK----GTPKRPGWAIETYVFAMFDE 283

Query: 327 NQKTGPGTERHWGMLHGNGVPIYEID 352
           NQK G   E+H+G+ + N  P Y ID
Sbjct: 284 NQKPGESVEKHFGLFYPNKQPKYPID 309


Length = 310

>gnl|CDD|197867 smart00768, X8, Possibly involved in carbohydrate binding Back     alignment and domain information
>gnl|CDD|219681 pfam07983, X8, X8 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 459
PF00332310 Glyco_hydro_17: Glycosyl hydrolases family 17; Int 100.0
COG5309305 Exo-beta-1,3-glucanase [Carbohydrate transport and 100.0
smart0076885 X8 Possibly involved in carbohydrate binding. The 99.94
PF0798378 X8: X8 domain; InterPro: IPR012946 The X8 domain [ 99.86
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 98.89
PF03198314 Glyco_hydro_72: Glucanosyltransferase; InterPro: I 98.74
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 98.06
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 97.78
PRK10150604 beta-D-glucuronidase; Provisional 97.54
smart00633254 Glyco_10 Glycosyl hydrolase family 10. 97.21
PF11790239 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; 96.14
PF02836298 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM 92.56
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3 Back     alignment and domain information
Probab=100.00  E-value=1.6e-88  Score=683.05  Aligned_cols=309  Identities=49%  Similarity=0.891  Sum_probs=254.0

Q ss_pred             ceEEecCCCCCCCCHHHHHHHHHhCCCCeEEEecCChhhhhhhhcCCceEEEEeccchhHHHhhhHHHHHHHHHhhcccc
Q 012660           28 IGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNHEIIDIASKQKVADQWVHDNVLSF  107 (459)
Q Consensus        28 ~GvnYg~~~~nlps~~~vv~llks~~~~~VRlY~~d~~vL~A~~~tgi~v~vGv~n~~l~~~a~~~~~A~~wv~~~v~~~  107 (459)
                      ||||||+.++|||+|.+|++++|+++|++||||++|+++|+|+++|||+|+|||+|++++++++++..|..||++||.+|
T Consensus         1 iGvnyG~~~~nlp~p~~vv~l~ks~~i~~vri~d~~~~iL~a~a~S~i~v~v~vpN~~l~~la~~~~~A~~Wv~~nv~~~   80 (310)
T PF00332_consen    1 IGVNYGRVGNNLPSPCKVVSLLKSNGITKVRIYDADPSILRAFAGSGIEVMVGVPNEDLASLASSQSAAGSWVRTNVLPY   80 (310)
T ss_dssp             EEEEE---SSS---HHHHHHHHHHTT--EEEESS--HHHHHHHTTS--EEEEEE-GGGHHHHHHHHHHHHHHHHHHTCTC
T ss_pred             CeEeccCccCCCCCHHHHHHHHHhcccccEEeecCcHHHHHHHhcCCceeeeccChHHHHHhccCHHHHhhhhhhccccc
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEEEeccccccCCchhhhhhHHHHHHHHHHHHHHHHhCCCCc-eEeccccccccccccCCCCCccccCcchhhh
Q 012660          108 YPETMIRFILVGNEILSQSSEEYKQIWKNLVPAMHRIKKCLNAHNIHN-IKVGTPLAMDIFQTTFPPSNGTFRSDISASV  186 (459)
Q Consensus       108 ~~~~~I~~I~VGNEvl~~~~~~~~~~~~~Lv~am~~v~~aL~~~gl~~-IkVsT~~~~~~l~~s~pPS~g~f~~~~~~~~  186 (459)
                      +|.++|++|+||||++...   +..   .|||+|+++|++|.++||++ |||+|+++++++..+||||+|.|++++. ++
T Consensus        81 ~~~~~i~~i~VGnEv~~~~---~~~---~lvpAm~ni~~aL~~~~L~~~IkVst~~~~~vl~~s~PPS~g~F~~~~~-~~  153 (310)
T PF00332_consen   81 LPAVNIRYIAVGNEVLTGT---DNA---YLVPAMQNIHNALTAAGLSDQIKVSTPHSMDVLSNSFPPSAGVFRSDIA-SV  153 (310)
T ss_dssp             TTTSEEEEEEEEES-TCCS---GGG---GHHHHHHHHHHHHHHTT-TTTSEEEEEEEGGGEEE-SSGGG-EESHHHH-HH
T ss_pred             CcccceeeeecccccccCc---cce---eeccHHHHHHHHHHhcCcCCcceeccccccccccccCCCccCcccccch-hh
Confidence            9999999999999999876   222   89999999999999999997 9999999999999999999999999987 89


Q ss_pred             hHHHHHHHhhcCCccccccccccccCCCCCccCcchhhcccCCCccccCCCCcccchhHHHHHHHHHHHHHHcCCCCceE
Q 012660          187 MEPLLQFLNRTKSFFFLDVYPYFAWSTNPKTISLDFALLRETNTSYTDPNSGLVYTNLLDQMLDSVIFAMAKLGYSDIRL  266 (459)
Q Consensus       187 ~~~~ldfL~~~~sp~~vNiyPyf~~~~~p~~i~l~yAlf~~~~~~~~d~~~~~~Y~n~fda~~Dav~~A~~k~g~~~~~v  266 (459)
                      |+++++||.+++||||+|+||||++..+|..++||||+|++ +..++|+  +++|+||||+|+|++++||+|+|+++++|
T Consensus       154 ~~~~l~fL~~t~spf~vN~yPyfa~~~~~~~~~l~yAlf~~-~~~~~D~--~~~y~nlfDa~~da~~~a~~~~g~~~~~v  230 (310)
T PF00332_consen  154 MDPLLKFLDGTNSPFMVNVYPYFAYQNNPQNISLDYALFQP-NSGVVDG--GLAYTNLFDAMVDAVYAAMEKLGFPNVPV  230 (310)
T ss_dssp             HHHHHHHHHHHT--EEEE--HHHHHHHSTTTS-HHHHTT-S-SS-SEET--TEEESSHHHHHHHHHHHHHHTTT-TT--E
T ss_pred             hhHHHHHhhccCCCceeccchhhhccCCcccCCcccccccc-ccccccc--chhhhHHHHHHHHHHHHHHHHhCCCCcee
Confidence            99999999999999999999999999999999999999998 6666665  88999999999999999999999999999


Q ss_pred             EEeecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccEEEEEeccCCCCCCCCCCceeeeecCCCC
Q 012660          267 AISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTSKPALGTPARPGSIIPTFIFSLYDENQKTGPGTERHWGMLHGNGV  346 (459)
Q Consensus       267 vVsETGWPS~G~~~~~~as~~na~~y~~~li~~~~s~~~~GTp~rp~~~~~~yiF~lFDe~~K~G~~~E~~wGlf~~d~~  346 (459)
                      +|+||||||+|+   .+|+.+||+.|++++++|+.  +  |||+||+..+++||||||||+||+|+.+|||||||++||+
T Consensus       231 vv~ETGWPs~G~---~~a~~~nA~~~~~nl~~~~~--~--gt~~~~~~~~~~y~F~~FdE~~K~~~~~E~~wGlf~~d~~  303 (310)
T PF00332_consen  231 VVGETGWPSAGD---PGATPENAQAYNQNLIKHVL--K--GTPLRPGNGIDVYIFEAFDENWKPGPEVERHWGLFYPDGT  303 (310)
T ss_dssp             EEEEE---SSSS---TTCSHHHHHHHHHHHHHHCC--G--BBSSSBSS---EEES-SB--TTSSSSGGGGG--SB-TTSS
T ss_pred             EEeccccccCCC---CCCCcchhHHHHHHHHHHHh--C--CCcccCCCCCeEEEEEEecCcCCCCCcccceeeeECCCCC
Confidence            999999999998   46999999999999999997  3  9999999999999999999999998779999999999999


Q ss_pred             eeEEeee
Q 012660          347 PIYEIDL  353 (459)
Q Consensus       347 ~ky~l~~  353 (459)
                      |||+|+|
T Consensus       304 ~ky~~~f  310 (310)
T PF00332_consen  304 PKYDLDF  310 (310)
T ss_dssp             BSS----
T ss_pred             eecCCCC
Confidence            9999986



2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.

>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00768 X8 Possibly involved in carbohydrate binding Back     alignment and domain information
>PF07983 X8: X8 domain; InterPro: IPR012946 The X8 domain [] contains 6 conserved cysteine residues that presumably form three disulphide bridges Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>smart00633 Glyco_10 Glycosyl hydrolase family 10 Back     alignment and domain information
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins Back     alignment and domain information
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query459
2cyg_A312 Crystal Structure At 1.45- Resolution Of The Major 5e-50
1ghs_A306 The Three-Dimensional Structures Of Two Plant Beta- 6e-49
1aq0_A306 Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space G 6e-47
3ur7_A323 Higher-density Crystal Structure Of Potato Endo-1,3 1e-45
3em5_A316 Crystal Structure Of A Native Endo Beta-1,3-Glucana 3e-45
4gzi_A323 Active-site Mutant Of Potato Endo-1,3-beta-glucanas 8e-45
2jon_A101 Solution Structure Of The C-Terminal Domain Ole E 9 5e-05
>pdb|2CYG|A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome Length = 312 Back     alignment and structure

Iteration: 1

Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 111/327 (33%), Positives = 186/327 (56%), Gaps = 16/327 (4%) Query: 28 IGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNHEII 87 IG+ YG LG+NLP + + K +++YD N L+ L ++++V + V ++ Sbjct: 1 IGVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQ 60 Query: 88 DIASKQKVADQWVHDNVLSFYPETMIRFILVGNEILSQSSEEYKQIWKNLVPAMHRIKKC 147 +AS A W+ NV++++P R+I VGNE++ S + + ++PAM I Sbjct: 61 SLASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGS-----DLAQYILPAMRNIYNA 115 Query: 148 LNAHNIHN-IKVGTPLAMDIFQTTFPPSNGTFRSDISASVMEPLLQFLNRTKSFFFLDVY 206 L++ + N IKV T + + T++PPS G F S A + P++QFL + ++VY Sbjct: 116 LSSAGLQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQA-YLSPIVQFLASNGAPLLVNVY 174 Query: 207 PYFAWSTNPKTISLDFALLRETNTSYTDPNSGLVYTNLLDQMLDSVIFAMAKLGYSDIRL 266 PYF+++ NP ISL +AL + D Y NL D ++D+V A+ ++G +++ + Sbjct: 175 PYFSYTGNPGQISLPYALFTASGVVVQD--GRFSYQNLFDAIVDAVFAALERVGGANVAV 232 Query: 267 AISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTSKPALGTPARPGSIIPTFIFSLYDE 326 +SE+GWP+AG + A+ NA TYN+NLI+ + GTP RPG I +IF +++E Sbjct: 233 VVSESGWPSAGGGAE--ASTSNAQTYNQNLIRHVGG----GTPRRPGKEIEAYIFEMFNE 286 Query: 327 NQKTGPGTERHWGMLHGNGVPIYEIDL 353 NQK G G E+++G+ + N P+Y+I Sbjct: 287 NQKAG-GIEQNFGLFYPNKQPVYQISF 312
>pdb|1GHS|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities Length = 306 Back     alignment and structure
>pdb|1AQ0|A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group Length = 306 Back     alignment and structure
>pdb|3UR7|A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase Length = 323 Back     alignment and structure
>pdb|3EM5|A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis Length = 316 Back     alignment and structure
>pdb|4GZI|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose Length = 323 Back     alignment and structure
>pdb|2JON|A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 Length = 101 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query459
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 3e-96
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 7e-95
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 2e-94
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 1e-91
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 5e-91
2jon_A101 Beta-1,3-glucanase; olive pollen, allergen; NMR {O 5e-30
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
2w61_A555 GAS2P, glycolipid-anchored surface protein 2; glyc 1e-05
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Length = 306 Back     alignment and structure
 Score =  291 bits (745), Expect = 3e-96
 Identities = 107/326 (32%), Positives = 171/326 (52%), Gaps = 20/326 (6%)

Query: 28  IGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNHEII 87
           IG+ YG   +NLP++   +   K     S+++Y  N   L+ + GT + V +   N  + 
Sbjct: 1   IGVCYGMSANNLPAASTVVSMFKSNGIKSMRLYAPNQAALQAVGGTGINVVVGAPNDVLS 60

Query: 88  DIASKQKVADQWVHDNVLSFYPETMIRFILVGNEILSQSSEEYKQIWKNLVPAMHRIKKC 147
           ++A+    A  WV  N+   YP+   R++ VGNE+   +        +NLVPAM  +   
Sbjct: 61  NLAASPAAAASWVKSNI-QAYPKVSFRYVCVGNEVAGGA-------TRNLVPAMKNVHGA 112

Query: 148 LNAHNIHNIKVGTPLAMDIFQTTFPPSNGTFRSDISASVMEPLLQFLNRTKSFFFLDVYP 207
           L A  + +IKV T ++  I     PPS G+F  +  A+ M P++QFL RT +    ++YP
Sbjct: 113 LVAAGLGHIKVTTSVSQAILGVFSPPSAGSFTGEA-AAFMGPVVQFLARTNAPLMANIYP 171

Query: 208 YFAWSTNPKTISLDFALLRETNTSYTDPNSGLVYTNLLDQMLDSVIFAMAKLGYSDIRLA 267
           Y AW+ NP  + + +AL   + T     +    Y NL D  +D+   AM K G S ++L 
Sbjct: 172 YLAWAYNPSAMDMGYALFNASGT--VVRDGAYGYQNLFDTTVDAFYTAMGKHGGSSVKLV 229

Query: 268 ISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTSKPALGTPARPGSIIPTFIFSLYDEN 327
           +SE+GWP+ G      A   NA  YN++LI  +      GTP  PG+ I T+IF++++EN
Sbjct: 230 VSESGWPSGGGT---AATPANARFYNQHLINHVGR----GTPRHPGA-IETYIFAMFNEN 281

Query: 328 QKTGPGTERHWGMLHGNGVPIYEIDL 353
           QK     E++WG+ + N   +Y I+ 
Sbjct: 282 QKDSG-VEQNWGLFYPNMQHVYPINF 306


>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Length = 306 Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Length = 312 Back     alignment and structure
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} PDB: 3f55_A* Length = 316 Back     alignment and structure
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Length = 323 Back     alignment and structure
>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea} Length = 101 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Length = 555 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query459
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 100.0
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 100.0
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 100.0
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 100.0
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 100.0
2w61_A555 GAS2P, glycolipid-anchored surface protein 2; glyc 100.0
2jon_A101 Beta-1,3-glucanase; olive pollen, allergen; NMR {O 99.96
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 99.52
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 99.52
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 99.32
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 98.9
4ekj_A500 Beta-xylosidase; TIM-barrel fold, hemicellulase, h 98.55
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 98.5
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 98.45
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 98.31
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 98.29
3icg_A515 Endoglucanase D; cellulase, xylanase, carbohydrate 98.21
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 98.17
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 98.13
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 98.1
3cmg_A667 Putative beta-galactosidase; structural genomics, 98.06
1w91_A503 Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 98.05
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 98.03
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 98.02
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 97.98
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 97.95
1uhv_A500 Beta-xylosidase; family 39 glycoside hydrolase, xy 97.93
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 97.92
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 97.91
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 97.91
2cks_A306 Endoglucanase E-5; carbohydrate metabolism, polysa 97.86
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 97.86
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 97.82
1wky_A464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 97.77
4hty_A359 Cellulase; (alpha/beta)8 barrel, family 5 endogluc 97.7
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 97.67
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 97.66
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 97.64
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 97.61
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 97.6
3fn9_A692 Putative beta-galactosidase; structural genomics, 97.56
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 97.54
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 97.45
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 97.42
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 97.38
7a3h_A303 Endoglucanase; hydrolase, cellulose degradation, g 97.33
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 97.26
1g01_A364 Endoglucanase; alpha/beta barrel, TIM barrel, hydr 97.12
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 97.08
1nq6_A302 XYS1; glycoside hydrolase family 10, xylanase, xyl 96.86
1ur1_A378 Endoxylanase; hydrolase, family 10, glycoside hydr 96.86
3cui_A315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 96.76
1xyz_A347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 96.74
3l55_A353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 96.73
1n82_A331 Xylanase, intra-cellular xylanase; hydrolase; 1.45 96.67
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 96.46
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 96.43
1w32_A348 Endo-1,4-beta-xylanase A precursor; mutant, calciu 96.41
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 96.05
1r85_A379 Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A 96.02
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 95.84
2y8k_A491 Arabinoxylanase, carbohydrate binding family 6; hy 95.76
3fj0_A465 Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase 95.7
2uwf_A356 Endoxylanase, alkaline active endoxylanase; hydrol 95.36
2dep_A356 Xylanase B, thermostable celloxylanase; glycosidas 95.33
1vff_A423 Beta-glucosidase; glycosyl hydrolase, membrane-bou 95.32
2c7f_A513 Alpha-L-arabinofuranosidase; glycosidase, xylan, a 95.19
1qw9_A502 Arabinosidase, alpha-L-arabinofuranosidase; hydrol 95.14
2d1z_A436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 95.09
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 95.03
2vrq_A496 Alpha-L-arabinofuranosidase; hydrolase, glycosidas 94.75
1ug6_A431 Beta-glycosidase; glucosidase, atomic resolution, 94.73
3vny_A488 Beta-glucuronidase; TIM barrel, greek-KEY, glycosi 94.38
2y2w_A574 Arabinofuranosidase; hydrolase, arabinoxylan, glyc 93.87
1ta3_B303 Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), 93.09
3d3a_A 612 Beta-galactosidase; protein structure initiative I 92.26
3niy_A341 Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 90.67
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 90.51
2w5f_A540 Endo-1,4-beta-xylanase Y; cellulosome, glycosidase 86.36
1yq2_A 1024 Beta-galactosidase; glycosyl hydrolase family 2, T 86.28
1i1w_A303 Endo-1,4-beta-xylanase; xylan degradation, hydrola 86.05
1v0l_A313 Endo-1,4-beta-xylanase A; glycoside hydrolase fami 85.41
3bga_A 1010 Beta-galactosidase; NYSGXRC, protein structure ini 84.1
1jz7_A 1023 Lactase, beta-galactosidase, LACZ; TIM barrel (alp 80.39
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* Back     alignment and structure
Probab=100.00  E-value=1.1e-98  Score=754.24  Aligned_cols=313  Identities=33%  Similarity=0.651  Sum_probs=298.1

Q ss_pred             cceEEecCCCCCCCCHHHHHHHHHhCCCCeEEEecCChhhhhhhhcCCceEEEEeccchhHHHhhhHHHHHHHHHhhccc
Q 012660           27 KIGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNHEIIDIASKQKVADQWVHDNVLS  106 (459)
Q Consensus        27 ~~GvnYg~~~~nlps~~~vv~llks~~~~~VRlY~~d~~vL~A~~~tgi~v~vGv~n~~l~~~a~~~~~A~~wv~~~v~~  106 (459)
                      .||||||+.++|||+|++|+++||+++|++||||++|+++|+|++++||+|+|||||+++++++ ++..|.+||++||.+
T Consensus         1 ~iGvnyG~~~~nlp~p~~vv~llks~gi~~VRlYdaD~~vL~Al~~sgi~v~vGV~n~~l~~la-~~~~A~~WV~~nV~~   79 (316)
T 3em5_A            1 EVGVCYGMQGNNLPPVSEVIALYKKSNITRMRIYDPNQAVLEALRGSNIELILGVPNSDLQSLT-NPSNAKSWVQKNVRG   79 (316)
T ss_dssp             CCEEECCCCCTTCCCHHHHHHHHHHTTCCEEECSSCCHHHHHHHTTCCCEEEEEECGGGHHHHT-SHHHHHHHHHHHTGG
T ss_pred             CeeEEcCcCCCCCCCHHHHHHHHHHcCCCEEEEecCCHHHHHHhhcCCceEEEecccchhhhcc-CHHHHHHHHHHhhhh
Confidence            3899999999999999999999999999999999999999999999999999999999999999 899999999999999


Q ss_pred             cCCCceEEEEEeccccccCCchhhh--hhHHHHHHHHHHHHHHHHhCCCCc-eEeccccccccccccCCCCCccccCcch
Q 012660          107 FYPETMIRFILVGNEILSQSSEEYK--QIWKNLVPAMHRIKKCLNAHNIHN-IKVGTPLAMDIFQTTFPPSNGTFRSDIS  183 (459)
Q Consensus       107 ~~~~~~I~~I~VGNEvl~~~~~~~~--~~~~~Lv~am~~v~~aL~~~gl~~-IkVsT~~~~~~l~~s~pPS~g~f~~~~~  183 (459)
                      |+|.++|++|+||||+|.++   +.  ..++.|+|+|+|||++|+++||++ |||||++++++|.+|||||+|+||+++.
T Consensus        80 y~p~~~I~~IaVGNEvl~~~---~~t~~~~~~LvpAm~nv~~AL~~aGL~~~IkVsT~~s~~vl~~s~pPS~g~F~~~~~  156 (316)
T 3em5_A           80 FWSSVRFRYIAVGNEISPVN---RGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVR  156 (316)
T ss_dssp             GTTTSCEEEEEEEESCCTTC---TTTGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEEECTTSEEECSSGGGCEECGGGH
T ss_pred             cCCCceEEEEEEecccccCC---CccccCHHHHHHHHHHHHHHHHHCCCCCceEEEecccccccccCCCCCCceechhHH
Confidence            99999999999999999986   31  128899999999999999999988 9999999999999999999999999997


Q ss_pred             hhhhHHHHHHHhhcCCccccccccccccCCCCCccCcchhhcccCCCccccCCCCcccchhHHHHHHHHHHHHHHcCCCC
Q 012660          184 ASVMEPLLQFLNRTKSFFFLDVYPYFAWSTNPKTISLDFALLRETNTSYTDPNSGLVYTNLLDQMLDSVIFAMAKLGYSD  263 (459)
Q Consensus       184 ~~~~~~~ldfL~~~~sp~~vNiyPyf~~~~~p~~i~l~yAlf~~~~~~~~d~~~~~~Y~n~fda~~Dav~~A~~k~g~~~  263 (459)
                       ++|+++|+||++++||||||+||||+|..+|.+|+|+||||++  .+++|++++++|+||||||+||+++||+|+|+++
T Consensus       157 -~~~~pil~fL~~~~sp~~vN~YPyf~~~~~~~~i~l~yAlf~~--~~~~~~~~~~~Y~nlfDa~~Da~~~Al~~~g~~~  233 (316)
T 3em5_A          157 -SYLNPIIRFLSSIRSPLLANIYPYFTYAGNPRDISLPYALFTS--PSVVVWDGQRGYKNLFDATLDALYSALERASGGS  233 (316)
T ss_dssp             -HHHHHHHHHHHHTTCCEEEECCHHHHHHHCTTTSCHHHHTTCC--SSCSEEETTEEECSHHHHHHHHHHHHHHHTTCTT
T ss_pred             -HHHHHHHHHHHhcCCeeEeecchhhhccCCCCCcCchhhcccC--CCcccCCCCccHHHHHHHHHHHHHHHHHHcCCCC
Confidence             8999999999999999999999999999999999999999997  5677888999999999999999999999999999


Q ss_pred             ceEEEeecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccEEEEEeccCCCCCCCCCCceeeeecC
Q 012660          264 IRLAISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTSKPALGTPARPGSIIPTFIFSLYDENQKTGPGTERHWGMLHG  343 (459)
Q Consensus       264 ~~vvVsETGWPS~G~~~~~~as~~na~~y~~~li~~~~s~~~~GTp~rp~~~~~~yiF~lFDe~~K~G~~~E~~wGlf~~  343 (459)
                      ++|+|+||||||+|+.   +||++||++|+++++||+  +.  |||+|||..+++|||+||||+||+| +.|||||||++
T Consensus       234 ~~v~V~EtGWPs~G~~---~as~~na~~y~~~li~~~--~~--GTP~rp~~~~~~y~F~lfDe~~K~~-~~E~~~Glf~~  305 (316)
T 3em5_A          234 LEVVVSESGWPSAGAF---AATFDNGRTYLSNLIQHV--KR--GTPKRPKRAIETYLFAMFDENKKQP-EVEKHFGLFFP  305 (316)
T ss_dssp             CCEEEEEECCCSSSST---TCCHHHHHHHHHHHHHHT--TS--CCSSSCSSCCCEEESCSBCCTTCSS-GGGGCCCSBCT
T ss_pred             CceEeccccCCCCCCC---CCCHHHHHHHHHHHHHhc--cC--CCCCCCCCCceEEEEEeecCCCCCC-CCCceeeEECC
Confidence            9999999999999974   799999999999999998  34  9999999889999999999999984 89999999999


Q ss_pred             CCCeeEEeeeC
Q 012660          344 NGVPIYEIDLS  354 (459)
Q Consensus       344 d~~~ky~l~~~  354 (459)
                      |++|||+|+|+
T Consensus       306 d~~~ky~l~~~  316 (316)
T 3em5_A          306 NKWQKYNLNFS  316 (316)
T ss_dssp             TSCBSSCCCCC
T ss_pred             CCCEeecCCCC
Confidence            99999999873



>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea} Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 Back     alignment and structure
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Back     alignment and structure
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A Back     alignment and structure
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Back     alignment and structure
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* Back     alignment and structure
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} Back     alignment and structure
>1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 Back     alignment and structure
>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A Back     alignment and structure
>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A Back     alignment and structure
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A Back     alignment and structure
>3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* Back     alignment and structure
>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} Back     alignment and structure
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Back     alignment and structure
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A Back     alignment and structure
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Back     alignment and structure
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 459
d1ghsa_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 8e-98
d2cyga1312 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana ( 3e-97
d1aq0a_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 6e-95
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]
 Score =  294 bits (753), Expect = 8e-98
 Identities = 110/325 (33%), Positives = 182/325 (56%), Gaps = 20/325 (6%)

Query: 28  IGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNHEII 87
           IG+ YG +G+NLPS    ++  +      ++IY A+ + L  L  + + + + + N ++ 
Sbjct: 1   IGVCYGVIGNNLPSRSDVVQLYRSKGINGMRIYFADGQALSALRNSGIGLILDIGNDQLA 60

Query: 88  DIASKQKVADQWVHDNVLSFYPETMIRFILVGNEILSQSSEEYKQIWKNLVPAMHRIKKC 147
           +IA+    A  WV +NV  +YP   I++I  GNE+   +        ++++PAM  +   
Sbjct: 61  NIAASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQGGA-------TQSILPAMRNLNAA 113

Query: 148 LNAHNIHNIKVGTPLAMDIFQTTFPPSNGTFRSDISASVMEPLLQFLNRTKSFFFLDVYP 207
           L+A  +  IKV T +  D    +FPPS G F++      M  + + L  T +    +VYP
Sbjct: 114 LSAAGLGAIKVSTSIRFDEVANSFPPSAGVFKNAY----MTDVARLLASTGAPLLANVYP 169

Query: 208 YFAWSTNPKTISLDFALLRETNTSYTDPNSGLVYTNLLDQMLDSVIFAMAKLGYSDIRLA 267
           YFA+  NP +ISL++A  +   T+  D N+GL YT+L D M+D+V  A+ K G   +++ 
Sbjct: 170 YFAYRDNPGSISLNYATFQ-PGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVV 228

Query: 268 ISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTSKPALGTPARPGSIIPTFIFSLYDEN 327
           +SE+GWP+AG F    A+  NA TYN+ LI  +      GTP +  + + T+IF++++EN
Sbjct: 229 VSESGWPSAGGF---AASAGNARTYNQGLINHVGG----GTPKKREA-LETYIFAMFNEN 280

Query: 328 QKTGPGTERHWGMLHGNGVPIYEID 352
           QKTG  TER +G+ + +  P Y I 
Sbjct: 281 QKTGDATERSFGLFNPDKSPAYNIQ 305


>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Length = 312 Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query459
d1ghsa_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d2cyga1312 Plant beta-glucanases {Banana (Musa acuminata), 1, 100.0
d1aq0a_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 99.06
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 98.91
d1uhva2346 Beta-D-xylosidase, catalytic domain {Thermoanaerob 98.86
d1bhga3304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 98.67
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 98.48
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 98.47
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 98.46
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 98.46
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 98.1
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 98.07
d1xyza_320 Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 97.94
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 97.89
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 97.87
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 97.81
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 97.68
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 97.64
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 97.6
d1vbua1324 Xylanase {Thermotoga maritima [TaxId: 2336]} 97.58
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 97.58
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 97.55
d1fh9a_312 Xylanase A, catalytic core {Cellulomonas fimi [Tax 97.39
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 96.77
d1nq6a_302 Xylanase A, catalytic core {Streptomyces halstedii 96.69
d1us3a2364 Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] 95.93
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 95.87
d1ug6a_426 Beta-glucosidase A {Thermus thermophilus [TaxId: 2 95.66
d2vzsa5339 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 95.54
d2je8a5348 Five-domain beta-mannosidase, domain 3 {Bacteroide 95.16
d1jz8a5292 beta-Galactosidase, domain 3 {Escherichia coli [Ta 94.87
d1e4ia_447 Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 94.76
d1n82a_330 Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId 94.67
d1yq2a5297 beta-Galactosidase, domain 3 {Arthrobacter sp. c2- 94.52
d1qoxa_449 Beta-glucosidase A {Bacillus circulans, subsp. alk 94.15
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 91.86
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 91.7
d1v0la_302 Xylanase A, catalytic core {Streptomyces lividans 91.23
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 87.22
d2v3ga1273 Endoglucanase H N-terminal domain {Clostridium the 86.9
d2f6ka1306 Putative amidohydrolase LP2961 {Lactobacillus plan 85.25
d1qw9a2367 Alpha-L-arabinofuranosidase, catalytic domain {Bac 83.56
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]
Probab=100.00  E-value=7.5e-87  Score=667.59  Aligned_cols=306  Identities=36%  Similarity=0.690  Sum_probs=293.1

Q ss_pred             ceEEecCCCCCCCCHHHHHHHHHhCCCCeEEEecCChhhhhhhhcCCceEEEEeccchhHHHhhhHHHHHHHHHhhcccc
Q 012660           28 IGINYGKLGSNLPSSYQSIESIKFLQAGSVKIYDANPEILKLLSGTDLKVSIMVQNHEIIDIASKQKVADQWVHDNVLSF  107 (459)
Q Consensus        28 ~GvnYg~~~~nlps~~~vv~llks~~~~~VRlY~~d~~vL~A~~~tgi~v~vGv~n~~l~~~a~~~~~A~~wv~~~v~~~  107 (459)
                      ||||||++|+|+||+++|+++||+++|++||||++||++|+|++++||+|+|||||+++.+++++.+.|+.||+++|++|
T Consensus         1 ~gi~yg~~~~n~ps~~~Vv~llks~~i~~VRlY~~d~~vL~A~~~~gi~v~lGv~n~~l~~~~~~~~~a~~~v~~~i~~~   80 (306)
T d1ghsa_           1 IGVCYGVIGNNLPSRSDVVQLYRSKGINGMRIYFADGQALSALRNSGIGLILDIGNDQLANIAASTSNAASWVQNNVRPY   80 (306)
T ss_dssp             CEEECCCCSSSCCCHHHHHHHHHHHTCCEEEESSCCHHHHHHTTTSCCEEEEECCGGGHHHHHHCHHHHHHHHHHHTTTT
T ss_pred             CeeeCCCccCCCCCHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHhcCCEEEEEeccchhhhhccCHHHHHHHHHHHHHhh
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEEEeccccccCCchhhhhhHHHHHHHHHHHHHHHHhCCCCceEeccccccccccccCCCCCccccCcchhhhh
Q 012660          108 YPETMIRFILVGNEILSQSSEEYKQIWKNLVPAMHRIKKCLNAHNIHNIKVGTPLAMDIFQTTFPPSNGTFRSDISASVM  187 (459)
Q Consensus       108 ~~~~~I~~I~VGNEvl~~~~~~~~~~~~~Lv~am~~v~~aL~~~gl~~IkVsT~~~~~~l~~s~pPS~g~f~~~~~~~~~  187 (459)
                      +|.++|++|+||||++.+.       ...|+|+|++||++|+++||.+|+|+|++.++++.+++|||.|.|+.    ++|
T Consensus        81 ~~~~~I~~I~VGNEvl~~~-------~~~l~~a~~~i~~al~~~gl~~i~v~t~~~~~~~~~~~p~s~~~f~~----~~~  149 (306)
T d1ghsa_          81 YPAVNIKYIAAGNEVQGGA-------TQSILPAMRNLNAALSAAGLGAIKVSTSIRFDEVANSFPPSAGVFKN----AYM  149 (306)
T ss_dssp             TTTSEEEEEEEEESCCGGG-------GGGHHHHHHHHHHHHHHHTCTTSEEEEEEEGGGEECCSSGGGCEESS----THH
T ss_pred             CCCceEEEEEecceeccCC-------cchhHHHHHHHHHHHHHCCCCCceeecccccccccCCCCCCccccch----hhh
Confidence            9999999999999999876       34799999999999999999889999999999999999999999986    568


Q ss_pred             HHHHHHHhhcCCccccccccccccCCCCCccCcchhhcccCCCccccCCCCcccchhHHHHHHHHHHHHHHcCCCCceEE
Q 012660          188 EPLLQFLNRTKSFFFLDVYPYFAWSTNPKTISLDFALLRETNTSYTDPNSGLVYTNLLDQMLDSVIFAMAKLGYSDIRLA  267 (459)
Q Consensus       188 ~~~ldfL~~~~sp~~vNiyPyf~~~~~p~~i~l~yAlf~~~~~~~~d~~~~~~Y~n~fda~~Dav~~A~~k~g~~~~~vv  267 (459)
                      .++++||.++.||+|+|+||||++..++..++++||+|++ +.++.|++++..|+|+||+|+|++++||+|+|+++++|+
T Consensus       150 ~~~~~~L~~~~d~~~vN~yPyf~~~~~~~~~~l~~alf~~-~~~~~~~~~~~~y~n~~d~~~d~~~~A~~~~~~~~k~iv  228 (306)
T d1ghsa_         150 TDVARLLASTGAPLLANVYPYFAYRDNPGSISLNYATFQP-GTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVV  228 (306)
T ss_dssp             HHHHHHHHHHTCCEEEECCHHHHHHHCTTTSCHHHHHTCT-TCCEECTTTCCEECCHHHHHHHHHHHHHHHHTCTTCCEE
T ss_pred             hHHHHHHHhcCCceEeecchhhhhcCCccccccchhhcCC-CCceecCchHHHHHHHHHHHHHHHHHHHHhcCCCCCceE
Confidence            9999999999999999999999999999999999999998 788899999999999999999999999999999999999


Q ss_pred             EeecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccEEEEEeccCCCCCCCCCCceeeeecCCCCe
Q 012660          268 ISETGWPNAGDFDQIGANIYNAATYNRNLIKKMTSKPALGTPARPGSIIPTFIFSLYDENQKTGPGTERHWGMLHGNGVP  347 (459)
Q Consensus       268 VsETGWPS~G~~~~~~as~~na~~y~~~li~~~~s~~~~GTp~rp~~~~~~yiF~lFDe~~K~G~~~E~~wGlf~~d~~~  347 (459)
                      |+||||||+|+.   +||++||++|++++++|+.+    |||+||+ .+++||||||||+||+|+++|||||||++||+|
T Consensus       229 I~ETGWPS~G~~---~as~~na~~y~~~l~~~~~~----gt~~r~~-~i~~f~FeaFDE~wK~~~~~E~~wGlf~~d~~~  300 (306)
T d1ghsa_         229 VSESGWPSAGGF---AASAGNARTYNQGLINHVGG----GTPKKRE-ALETYIFAMFNENQKTGDATERSFGLFNPDKSP  300 (306)
T ss_dssp             EEEECCCSSSST---TCCHHHHHHHHHHHHTTGGG----CCSSCCS-CCCEEEECSBCCTTCCSSGGGGGCCSBCTTSCB
T ss_pred             EcccccccCCCC---CCCHHHHHHHHHHHHHHHhc----CCCCCCC-CceEEEEeeeCcCCCCCCCccCccccCCCCCCE
Confidence            999999999975   59999999999999999853    9999998 699999999999999877899999999999999


Q ss_pred             eEEeee
Q 012660          348 IYEIDL  353 (459)
Q Consensus       348 ky~l~~  353 (459)
                      ||+|+|
T Consensus       301 ky~~~f  306 (306)
T d1ghsa_         301 AYNIQF  306 (306)
T ss_dssp             SSCCCC
T ss_pred             ecCCCC
Confidence            999976



>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Back     information, alignment and structure
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} Back     information, alignment and structure
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} Back     information, alignment and structure
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2f6ka1 c.1.9.15 (A:2-307) Putative amidohydrolase LP2961 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure