Citrus Sinensis ID: 012702

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------46
Protein Sequence
MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMGLVPKSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSWLQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG
Secondary Structure (PSIPRED)
ccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccHHHHHHcccccccEEEEEEccccccccccHHcHHHHHHccEEEEEEEEcccccccccccccccccccEEEEEEEEHHHHHHHHHccccccccccccEEEcEEEEEccccccccccccccccccccccccccccEEEEEEEEEEEEEcHHHHHHHHHHcccccEEEEcccccccHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHccccccccHHHHHHHHHccccEEccccccEEccccEEccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccEEEccccccccccccccccccccccHHHccccccccccHHHHEEEEEEEcccccccccccccccccccHHHHHHHcccccccEEEcccEccccccccHHHHHHHHcccEEEEEEEEcccccccccccccHcccccEEEEEEEccHHHHHHHHccccccccccccEEEEEEEEEEcccccccHHHcccccccccHHHccccEEEEEEEccEEEEccHHHHHHHHHHcccccEEEcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccccccccccccccEEEEcccHHHHHHHHHHHHHHHHcccHHHccHHHHHHHHcccccEcccccHHHHHHHHHcccccccccccEEEEcHHHHHcccccccccccccccccccccccccEEcccEEEEcccc
Coil and Loop (DISEMBL)
MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDtmglvpksqhrcpiptvddpntifipkertpdtIVKNLTYFLedefvhngsqssplfgghqswLQREESFKLNSNMKVHcgfmrnggaemspldvkYVKKCKFVVASgifdgydvphqpsnisrRSKKLFCFLMVMDEVSLKFIRKNvtikedsaggqwVGIWRLILlkhppydeprrngkvpkilthrlfpqaqysiwidgkmeliVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRyegmepwsikkntvsdvpegAVIIREHTALSNLFSClwfnevnlltprdqlsFGYVVYRLKGLFkfymfpnceynslfvlhphtrehsskiewVKSRdelkgngssmiegrgglgfwtpypgnldlvvlppvartskag
Flexible Loop (DISEMBL)
MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMGLVPksqhrcpiptvddpntifipkertpdTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSWLQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFdgydvphqpsniSRRSKKLFCFLMVMDEVSLKFIRKNvtikedsaggqwvGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFaiaqhkhhrsiyeeadankrrkryarplidYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTrehsskiewvksrDELKGNGSSMIEGRGGLGFWTPYPGNldlvvlppvartskag
Low Complexity Region (SEG)
MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMGLVPKSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSWLQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG
Disordered region (IsUnstruct)
**IVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMGLVPKSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNG*****LFGGHQSWLQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTRE***KIEWV*************IEGRGGLGFWTPYPGNLDLVVLPP********
Disordered Region (DISOPRED)
*******GFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFS**********************QHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYF********************SWLQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRK*******SAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHT****************************GLGFWTPYPGNLDLVVLPP*AR*****
Disordered Region (DISEMBL)
MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMGLVPKSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSWLQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG
Disordered Region (DISPRO)
MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMGLVPKSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSWLQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVART****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMGLVPKSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSWLQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	458
255560495	499	conserved hypothetical protein [Ricinus	0.993	0.911	0.814	0.0
297744567	520	unnamed protein product [Vitis vinifera]	0.995	0.876	0.803	0.0
224103151	510	predicted protein [Populus trichocarpa]	0.997	0.896	0.814	0.0
225428094	500	PREDICTED: uncharacterized protein LOC10	0.995	0.912	0.803	0.0
224080650	486	predicted protein [Populus trichocarpa]	0.991	0.934	0.799	0.0
357518877	493	hypothetical protein MTR_8g085850 [Medic	0.995	0.924	0.794	0.0
147827594	500	hypothetical protein VITISV_038566 [Viti	0.995	0.912	0.799	0.0
449461197	517	PREDICTED: uncharacterized protein LOC10	1.0	0.885	0.761	0.0
449507043	517	PREDICTED: uncharacterized protein LOC10	1.0	0.885	0.758	0.0
297797838	497	hypothetical protein ARALYDRAFT_490610 [	0.993	0.915	0.772	0.0

>gi|255560495|ref|XP_002521262.1| conserved hypothetical protein [Ricinus communis] gi|223539530|gb|EEF41118.1| conserved hypothetical protein [Ricinus communis]

 Score =  791 bits (2042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/458 (81%), Positives = 412/458 (89%), Gaps = 3/458 (0%)

Query: 1   MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMG 60
           MKI+WKRGF+RLV VAG+ WM LIL+VLLFHVWSCQSS AFFSAICNK+ KV+ +L+T G
Sbjct: 45  MKIIWKRGFVRLVFVAGVLWMFLILLVLLFHVWSCQSSSAFFSAICNKESKVYYILNTWG 104

Query: 61  LVPKSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSW 120
            V + QHRCPIP  ++P+ I IP+ RTPD IVKNL+Y LEDE V N SQ  PLFGGHQSW
Sbjct: 105 FVAQ-QHRCPIPVANNPDKIVIPEGRTPDKIVKNLSYILEDEPVKNRSQ--PLFGGHQSW 161

Query: 121 LQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNIS 180
            QRE+SFKLNS+M VHCGF+RNGGA+M P+D+ YVK+C+FVVASGIFDGYDVPHQPSNIS
Sbjct: 162 TQREKSFKLNSSMNVHCGFIRNGGAKMDPMDINYVKRCRFVVASGIFDGYDVPHQPSNIS 221

Query: 181 RRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVP 240
            RSKKLFCFLMV+DEVSL FI++N T++ED+ GGQWVGIWRLILLKHPPYDEPRRNGKVP
Sbjct: 222 DRSKKLFCFLMVVDEVSLDFIKENATVREDNEGGQWVGIWRLILLKHPPYDEPRRNGKVP 281

Query: 241 KILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADAN 300
           KILTHRLFPQAQYSIWIDGKMELIVDPLL+LERYLWRGK+TFAIAQHKHH SIYEEADAN
Sbjct: 282 KILTHRLFPQAQYSIWIDGKMELIVDPLLMLERYLWRGKNTFAIAQHKHHHSIYEEADAN 341

Query: 301 KRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNE 360
           KRRKRYARPLID  MKIYRYEGMEPWS+KK+TVSDVPEGAVIIREHT L+NLFSCLWFNE
Sbjct: 342 KRRKRYARPLIDLHMKIYRYEGMEPWSLKKSTVSDVPEGAVIIREHTPLNNLFSCLWFNE 401

Query: 361 VNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELK 420
           V+L TPRDQLSFGYVV+RL   FKF+MFPNCEYNSLFVLHPHTREHSSK+EWVKS +E K
Sbjct: 402 VHLFTPRDQLSFGYVVFRLGDAFKFFMFPNCEYNSLFVLHPHTREHSSKVEWVKSLNEFK 461

Query: 421 GNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG 458
           G+GSSM E RGGLG WTPYPGNLD VVLP V RTSKAG
Sbjct: 462 GSGSSMKESRGGLGLWTPYPGNLDSVVLPQVVRTSKAG 499

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297744567|emb|CBI37829.3| unnamed protein product [Vitis vinifera]

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/458 (80%), Positives = 406/458 (88%), Gaps = 2/458 (0%)

Query: 1   MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMG 60
           MK VWKRGFIRL LV GI W+LLIL VLLFH+WSC+SS AFFSAICN++ KVF++LD MG
Sbjct: 65  MKAVWKRGFIRLFLVGGIVWILLILTVLLFHIWSCESSFAFFSAICNRESKVFVVLDNMG 124

Query: 61  LVPKSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSW 120
           LVPK QHRCPIP  +DP+ + I + RTPD IV+NL+Y +ED+   N  QS PLFGGHQSW
Sbjct: 125 LVPKPQHRCPIPIANDPDKVVILQGRTPDKIVQNLSYIVEDK--KNEFQSPPLFGGHQSW 182

Query: 121 LQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNIS 180
           LQRE+SF+L S MKVHCGFM+NGGAEM+P+D+ Y KKC+FVVASGIFDGYD PH+PS+IS
Sbjct: 183 LQREKSFRLKSTMKVHCGFMQNGGAEMNPIDINYAKKCRFVVASGIFDGYDTPHEPSDIS 242

Query: 181 RRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVP 240
            RSKKLFCFLMVMDE+SL FI+KNVT+KED  GG WVGIWRL+LLKHPPYDEPRRNGKVP
Sbjct: 243 ARSKKLFCFLMVMDEISLDFIKKNVTVKEDVDGGLWVGIWRLVLLKHPPYDEPRRNGKVP 302

Query: 241 KILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADAN 300
           KILTHRLFP+AQYSIWIDGKMEL+VDPLLILERYLWRGKHTFAIAQHKHH SIYEEADA 
Sbjct: 303 KILTHRLFPEAQYSIWIDGKMELMVDPLLILERYLWRGKHTFAIAQHKHHHSIYEEADAI 362

Query: 301 KRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNE 360
           KRRKRYARPLID  MKIY YEGM+PWS KK T+SDVPEGAVIIREHTAL+NLFSCLWFNE
Sbjct: 363 KRRKRYARPLIDLHMKIYSYEGMKPWSPKKGTISDVPEGAVIIREHTALNNLFSCLWFNE 422

Query: 361 VNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELK 420
           VNL TPRDQLSFGYVVYRL GLFKF+MFPNCEYNSLFVLHPHTREHSS +EWVKS DE K
Sbjct: 423 VNLFTPRDQLSFGYVVYRLGGLFKFFMFPNCEYNSLFVLHPHTREHSSVVEWVKSLDEFK 482

Query: 421 GNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG 458
            N + + E RGGLG WTPYPGNLD V+LPPVARTSKAG
Sbjct: 483 TNKTGLKESRGGLGLWTPYPGNLDSVILPPVARTSKAG 520

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103151|ref|XP_002312945.1| predicted protein [Populus trichocarpa] gi|222849353|gb|EEE86900.1| predicted protein [Populus trichocarpa]

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/458 (81%), Positives = 410/458 (89%), Gaps = 1/458 (0%)

Query: 1   MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMG 60
           MKI+WK+GFIRLVLVAGI WMLLIL+VLLFHVWSCQSS  FFSAICNK+ KV+ +L+T G
Sbjct: 54  MKIIWKKGFIRLVLVAGILWMLLILIVLLFHVWSCQSSYLFFSAICNKESKVYTILNTWG 113

Query: 61  LVPKSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSW 120
            VP+ QHRCPIP V +P+ I IP+ RT D I+KNL+Y +ED+ V +GSQSSPLFGGHQSW
Sbjct: 114 FVPQ-QHRCPIPVVSNPDRIVIPEGRTHDQIIKNLSYVMEDKPVKDGSQSSPLFGGHQSW 172

Query: 121 LQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNIS 180
            QRE SFKL+S+MKVHCGFM NGGA+M P+D+KYV+KC+FVVASGIFDGYDVPHQPSNIS
Sbjct: 173 KQRERSFKLSSSMKVHCGFMHNGGADMDPVDIKYVEKCRFVVASGIFDGYDVPHQPSNIS 232

Query: 181 RRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVP 240
            RSK+LFCFLMV+DE+SL+FI++NVT+ ED   GQWVGIWRLILLKH PYDEPRRNGKVP
Sbjct: 233 DRSKELFCFLMVVDEISLEFIKENVTVWEDHNRGQWVGIWRLILLKHSPYDEPRRNGKVP 292

Query: 241 KILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADAN 300
           KILTHRLFPQAQYSIWIDGKMELIVDPL ILERYLW GK+TFAIAQHKHHRSIYEEADAN
Sbjct: 293 KILTHRLFPQAQYSIWIDGKMELIVDPLQILERYLWHGKNTFAIAQHKHHRSIYEEADAN 352

Query: 301 KRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNE 360
           KRRKRYARPLID  MKIY YEGMEPWS KK+TVSDVPEGA+IIREHTA+SNLFSCLWFNE
Sbjct: 353 KRRKRYARPLIDLHMKIYYYEGMEPWSPKKSTVSDVPEGAIIIREHTAMSNLFSCLWFNE 412

Query: 361 VNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELK 420
           VNL TPRDQLSFGYVVYRL G FKF+MFPNCEYNSLFVLHPHTREHSSK+EWVKS  E K
Sbjct: 413 VNLFTPRDQLSFGYVVYRLGGAFKFFMFPNCEYNSLFVLHPHTREHSSKVEWVKSLSEFK 472

Query: 421 GNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG 458
           GNGSSM E RGGLG WTPYP +L  VVLP V RTSKAG
Sbjct: 473 GNGSSMKESRGGLGLWTPYPADLKSVVLPKVVRTSKAG 510

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428094|ref|XP_002280425.1| PREDICTED: uncharacterized protein LOC100255620 [Vitis vinifera]

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/458 (80%), Positives = 406/458 (88%), Gaps = 2/458 (0%)

Query: 1   MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMG 60
           MK VWKRGFIRL LV GI W+LLIL VLLFH+WSC+SS AFFSAICN++ KVF++LD MG
Sbjct: 45  MKAVWKRGFIRLFLVGGIVWILLILTVLLFHIWSCESSFAFFSAICNRESKVFVVLDNMG 104

Query: 61  LVPKSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSW 120
           LVPK QHRCPIP  +DP+ + I + RTPD IV+NL+Y +ED+   N  QS PLFGGHQSW
Sbjct: 105 LVPKPQHRCPIPIANDPDKVVILQGRTPDKIVQNLSYIVEDK--KNEFQSPPLFGGHQSW 162

Query: 121 LQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNIS 180
           LQRE+SF+L S MKVHCGFM+NGGAEM+P+D+ Y KKC+FVVASGIFDGYD PH+PS+IS
Sbjct: 163 LQREKSFRLKSTMKVHCGFMQNGGAEMNPIDINYAKKCRFVVASGIFDGYDTPHEPSDIS 222

Query: 181 RRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVP 240
            RSKKLFCFLMVMDE+SL FI+KNVT+KED  GG WVGIWRL+LLKHPPYDEPRRNGKVP
Sbjct: 223 ARSKKLFCFLMVMDEISLDFIKKNVTVKEDVDGGLWVGIWRLVLLKHPPYDEPRRNGKVP 282

Query: 241 KILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADAN 300
           KILTHRLFP+AQYSIWIDGKMEL+VDPLLILERYLWRGKHTFAIAQHKHH SIYEEADA 
Sbjct: 283 KILTHRLFPEAQYSIWIDGKMELMVDPLLILERYLWRGKHTFAIAQHKHHHSIYEEADAI 342

Query: 301 KRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNE 360
           KRRKRYARPLID  MKIY YEGM+PWS KK T+SDVPEGAVIIREHTAL+NLFSCLWFNE
Sbjct: 343 KRRKRYARPLIDLHMKIYSYEGMKPWSPKKGTISDVPEGAVIIREHTALNNLFSCLWFNE 402

Query: 361 VNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELK 420
           VNL TPRDQLSFGYVVYRL GLFKF+MFPNCEYNSLFVLHPHTREHSS +EWVKS DE K
Sbjct: 403 VNLFTPRDQLSFGYVVYRLGGLFKFFMFPNCEYNSLFVLHPHTREHSSVVEWVKSLDEFK 462

Query: 421 GNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG 458
            N + + E RGGLG WTPYPGNLD V+LPPVARTSKAG
Sbjct: 463 TNKTGLKESRGGLGLWTPYPGNLDSVILPPVARTSKAG 500

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080650|ref|XP_002306196.1| predicted protein [Populus trichocarpa] gi|222849160|gb|EEE86707.1| predicted protein [Populus trichocarpa]

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/458 (79%), Positives = 404/458 (88%), Gaps = 4/458 (0%)

Query: 1   MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMG 60
           MKI+WKRGF+RLVLVAGI WMLLIL VL FHVWSCQSS  FFS ICNK+ KV+  L+T G
Sbjct: 33  MKIIWKRGFVRLVLVAGILWMLLILAVLSFHVWSCQSSSVFFSVICNKESKVYNFLNTWG 92

Query: 61  LVPKSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSW 120
            VPK QHRCPIP + +P  I IP+ RT D IVKN++Y +EDE   +GSQSSPLFGGHQSW
Sbjct: 93  FVPK-QHRCPIPVISNPERIVIPEGRTHDQIVKNISYVMEDE---DGSQSSPLFGGHQSW 148

Query: 121 LQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNIS 180
            QRE+SF L+S+MKVHCGFM NGGA+M  +D++YVK C+FVVASGIFDGYDVPHQPSNIS
Sbjct: 149 KQREKSFNLSSSMKVHCGFMHNGGADMDLVDIEYVKNCRFVVASGIFDGYDVPHQPSNIS 208

Query: 181 RRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVP 240
            RS+KLFCFLMV+DE+SL FI++NVT++ED  GG+WVGIWRLILLKH PYDEPRRNGKVP
Sbjct: 209 ERSRKLFCFLMVVDEISLDFIKENVTVREDHNGGRWVGIWRLILLKHSPYDEPRRNGKVP 268

Query: 241 KILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADAN 300
           KILTHRLFPQAQYSIWIDGKMEL+VDPL ILERYLWRGK+TFAIAQHKHHRSIYEEADAN
Sbjct: 269 KILTHRLFPQAQYSIWIDGKMELLVDPLQILERYLWRGKNTFAIAQHKHHRSIYEEADAN 328

Query: 301 KRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNE 360
           KRRKRYARPLID  MKIY +EGME WS KK +VSDVPEGA+IIREHTA+SNLFSCLWFNE
Sbjct: 329 KRRKRYARPLIDLHMKIYYHEGMESWSPKKRSVSDVPEGAIIIREHTAMSNLFSCLWFNE 388

Query: 361 VNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELK 420
           VNL TPRDQLSFGYVVYRL G F+F+MFPNCEYNSLFVLHPHTREHSSK+EWVKS  E K
Sbjct: 389 VNLFTPRDQLSFGYVVYRLGGAFRFFMFPNCEYNSLFVLHPHTREHSSKVEWVKSISEFK 448

Query: 421 GNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG 458
           GNGSSM E RGGLG WTPYPG+L  VVLP VARTSKAG
Sbjct: 449 GNGSSMKESRGGLGLWTPYPGDLSSVVLPKVARTSKAG 486

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357518877|ref|XP_003629727.1| hypothetical protein MTR_8g085850 [Medicago truncatula] gi|355523749|gb|AET04203.1| hypothetical protein MTR_8g085850 [Medicago truncatula]

 Score =  769 bits (1986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/458 (79%), Positives = 403/458 (87%), Gaps = 2/458 (0%)

Query: 1   MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMG 60
           MKIVWK+GF+RLVLV GI WMLLILV LLFH+WSCQSS++F S +CNK  KV+ MLDT G
Sbjct: 38  MKIVWKKGFVRLVLVGGILWMLLILVALLFHIWSCQSSVSFLSVMCNKDSKVYSMLDTYG 97

Query: 61  LVPKSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSW 120
           LVPK  HRCPIP  DDP+ I IP  RT D IVKNL+YF EDE  ++ SQSSPLFGGH SW
Sbjct: 98  LVPK-LHRCPIPLFDDPDKIVIPTRRTSDKIVKNLSYFTEDEIPNDSSQSSPLFGGHLSW 156

Query: 121 LQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNIS 180
            QREESFKL SNMKVHCGF++ GGAEM P+D+KYVKKCKFVVASGIFDGYD+PHQPSNIS
Sbjct: 157 KQREESFKLKSNMKVHCGFIQGGGAEMDPIDIKYVKKCKFVVASGIFDGYDIPHQPSNIS 216

Query: 181 RRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVP 240
            RSKKLFCFLMV+DEVSLKF+R+N T++EDSAGG+WVGIWRL+LLK+ PYDEPRRNGKVP
Sbjct: 217 LRSKKLFCFLMVVDEVSLKFMRENTTVEEDSAGGKWVGIWRLVLLKNQPYDEPRRNGKVP 276

Query: 241 KILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADAN 300
           KI+THRLFPQAQYSIWIDGKMEL+VDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADAN
Sbjct: 277 KIITHRLFPQAQYSIWIDGKMELVVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADAN 336

Query: 301 KRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNE 360
           KRRKRYARPLID  MKIY YEGM+PWS  K T SDVPEGA+IIREHTA++NLFSCLWFNE
Sbjct: 337 KRRKRYARPLIDLHMKIYYYEGMKPWSSNKKTNSDVPEGAIIIREHTAVNNLFSCLWFNE 396

Query: 361 VNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELK 420
           V+L TPRDQLSFGYV YRL   F+F+MFPNCEYNSLFVLHPHTREHSS IEWVK  D+LK
Sbjct: 397 VHLFTPRDQLSFGYVAYRLGESFEFFMFPNCEYNSLFVLHPHTREHSSPIEWVKQLDQLK 456

Query: 421 GNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG 458
            N S++ E RGGLG +TPYPG+L  VVLP + RTSKAG
Sbjct: 457 KN-SNLKESRGGLGLFTPYPGDLKSVVLPQITRTSKAG 493

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147827594|emb|CAN61976.1| hypothetical protein VITISV_038566 [Vitis vinifera]

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/458 (79%), Positives = 404/458 (88%), Gaps = 2/458 (0%)

Query: 1   MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMG 60
           MK VWKRGFIRL LV GI W+LLIL VLLFH+WSCZSS AFFSAICN++ KVF +LD MG
Sbjct: 45  MKAVWKRGFIRLFLVGGIVWILLILTVLLFHIWSCZSSFAFFSAICNRESKVFXVLDNMG 104

Query: 61  LVPKSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSW 120
           LVPK QHRCPIP  +DP+ + I + RTPD IV+NL+Y +ED+   N  QS PLFGGHQSW
Sbjct: 105 LVPKPQHRCPIPIANDPDKVVILQGRTPDKIVQNLSYIVEDK--KNEFQSPPLFGGHQSW 162

Query: 121 LQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNIS 180
           LQRE+SF+L S MKVHCGFM+NGGAEM+P+D+ Y KKC+FVVASGIFDGYD PH+PS+IS
Sbjct: 163 LQREKSFRLKSTMKVHCGFMQNGGAEMNPIDINYAKKCRFVVASGIFDGYDTPHEPSDIS 222

Query: 181 RRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVP 240
            RSKKLFCFLMVMDE+SL FI+KNVT+KED  GG WVGIWRL+LLKHPPYDEPRRNGKVP
Sbjct: 223 ARSKKLFCFLMVMDEISLDFIKKNVTVKEDVDGGLWVGIWRLVLLKHPPYDEPRRNGKVP 282

Query: 241 KILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADAN 300
           KILTHRLFP+AQYSIWIDGKMEL+VDPLLILERYLWRGKHTFAIAQHKHH SIYEEADA 
Sbjct: 283 KILTHRLFPEAQYSIWIDGKMELMVDPLLILERYLWRGKHTFAIAQHKHHHSIYEEADAI 342

Query: 301 KRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNE 360
           KRRKRYARPLID  MKIY YEGM+PWS KK T+SDVPEGAVIIREHTAL+NLFSCLWFNE
Sbjct: 343 KRRKRYARPLIDLHMKIYSYEGMKPWSPKKGTISDVPEGAVIIREHTALNNLFSCLWFNE 402

Query: 361 VNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELK 420
           VNL TPRDQLSFGY+VYRL GLFKF+MFPNCEYNSLFVLHPHTREHSS +EWVKS DE K
Sbjct: 403 VNLFTPRDQLSFGYIVYRLGGLFKFFMFPNCEYNSLFVLHPHTREHSSVVEWVKSLDEFK 462

Query: 421 GNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG 458
            N + + E RGGLG WT YPGNLD V+LPPVARTSKAG
Sbjct: 463 TNKTGLKESRGGLGLWTTYPGNLDSVILPPVARTSKAG 500

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461197|ref|XP_004148328.1| PREDICTED: uncharacterized protein LOC101222025 [Cucumis sativus]

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/473 (76%), Positives = 404/473 (85%), Gaps = 15/473 (3%)

Query: 1   MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMG 60
           MKIVWK+GFIRL LV G+ WMLLIL   L HVWSC+SS+ FFSAICNK+ KVF +LD+MG
Sbjct: 45  MKIVWKKGFIRLFLVGGMLWMLLILTASLLHVWSCRSSITFFSAICNKESKVFTILDSMG 104

Query: 61  LVPKSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSW 120
           ++ K+QHRC IP +D+ + + IPK RTPD IVK L Y  E E+  NGSQ+SPLFGGHQ+W
Sbjct: 105 IMAKAQHRCSIPLMDEADKVVIPKGRTPDEIVKRLVYITEAEYSINGSQTSPLFGGHQNW 164

Query: 121 LQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNIS 180
            QREESFKL   MKVHCGFM+NGGAEM P D+KYVKKC+FVVASGIFDGYDVP QPSNIS
Sbjct: 165 TQREESFKLKPTMKVHCGFMQNGGAEMVPADIKYVKKCRFVVASGIFDGYDVPRQPSNIS 224

Query: 181 RRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVP 240
            RSK LFCFLMV+DE+S++FIR+NVTI+ED+ GG+WVGIWRL+LLK+PPYDEPRRNGKVP
Sbjct: 225 VRSKDLFCFLMVVDEISMQFIRENVTIEEDNDGGKWVGIWRLVLLKYPPYDEPRRNGKVP 284

Query: 241 KILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADAN 300
           KILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHH SIYEEAD+N
Sbjct: 285 KILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHCSIYEEADSN 344

Query: 301 KRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNE 360
           KRRKRYARPLID  MKIYRYEGMEPWS +K +VSDVPEGA+IIREHTA++NLFSCLWFNE
Sbjct: 345 KRRKRYARPLIDLHMKIYRYEGMEPWSPEKKSVSDVPEGAIIIREHTAMNNLFSCLWFNE 404

Query: 361 VNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELK 420
           V++ TPRDQLSFGYVVYRL   FKF+MFPNCEY SLF+LHPHTREHSS IEWVK  D+LK
Sbjct: 405 VHMFTPRDQLSFGYVVYRLGNSFKFFMFPNCEYYSLFILHPHTREHSSLIEWVKDWDQLK 464

Query: 421 GNGSSM---------------IEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG 458
           GN S+M               IE RGGLG WTPYPG+LD VVLP V R+SKAG
Sbjct: 465 GNMSNMKEYKQWKQRNAPTSLIETRGGLGLWTPYPGDLDSVVLPTVVRSSKAG 517

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449507043|ref|XP_004162918.1| PREDICTED: uncharacterized protein LOC101225699 [Cucumis sativus]

 Score =  761 bits (1965), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/473 (75%), Positives = 404/473 (85%), Gaps = 15/473 (3%)

Query: 1   MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMG 60
           MKIVWK+GFIRL LV G+ WMLLIL   L HVWSC+SS+ FFSAICNK+ KVF +LD+MG
Sbjct: 45  MKIVWKKGFIRLFLVGGMLWMLLILTASLLHVWSCRSSITFFSAICNKESKVFTILDSMG 104

Query: 61  LVPKSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSW 120
           ++ K+QHRC IP +D+ + + IPK RTPD IVK L Y  E E++ NGSQ+ PLFGGHQ+W
Sbjct: 105 IMAKAQHRCSIPLMDEADKVVIPKGRTPDEIVKRLVYITEAEYLINGSQTLPLFGGHQNW 164

Query: 121 LQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNIS 180
            QREESFKL   MKVHCGFM+NGGAEM P D+KYVKKC+FVVASGIFDGYDVP QPSNIS
Sbjct: 165 TQREESFKLKPTMKVHCGFMQNGGAEMVPADIKYVKKCRFVVASGIFDGYDVPRQPSNIS 224

Query: 181 RRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVP 240
            RSK LFCFLMV+DE+S++FIR+NVTI+ED+ GG+WVGIWRL+LLK+PPYDEPRRNGKVP
Sbjct: 225 VRSKDLFCFLMVVDEISMQFIRENVTIEEDNDGGKWVGIWRLVLLKYPPYDEPRRNGKVP 284

Query: 241 KILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADAN 300
           KILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHH SIYEEAD+N
Sbjct: 285 KILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHCSIYEEADSN 344

Query: 301 KRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNE 360
           KRRKRYARPLID  MKIYRYEGMEPWS +K +VSDVPEGA+IIREHTA++NLFSCLWFNE
Sbjct: 345 KRRKRYARPLIDLHMKIYRYEGMEPWSPEKKSVSDVPEGAIIIREHTAMNNLFSCLWFNE 404

Query: 361 VNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELK 420
           V++ TPRDQLSFGYVVYRL   FKF+MFPNCEY SLF+LHPHTREHSS IEWVK  D+LK
Sbjct: 405 VHMFTPRDQLSFGYVVYRLGNSFKFFMFPNCEYYSLFILHPHTREHSSLIEWVKDWDQLK 464

Query: 421 GNGSSM---------------IEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG 458
           GN S+M               IE RGGLG WTPYPG+LD VVLP V R+SKAG
Sbjct: 465 GNMSNMKEYKQWKQRNAPTSLIETRGGLGLWTPYPGDLDSVVLPTVVRSSKAG 517

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297797838|ref|XP_002866803.1| hypothetical protein ARALYDRAFT_490610 [Arabidopsis lyrata subsp. lyrata] gi|297312639|gb|EFH43062.1| hypothetical protein ARALYDRAFT_490610 [Arabidopsis lyrata subsp. lyrata]

 Score =  753 bits (1944), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/458 (77%), Positives = 394/458 (86%), Gaps = 3/458 (0%)

Query: 1   MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMG 60
           +K +WK GF+RL+LV GI WMLLIL  LLFHVWSCQSSL+FFSAICNK+G++++MLDT+G
Sbjct: 43  LKKIWKAGFLRLLLVGGILWMLLILFALLFHVWSCQSSLSFFSAICNKEGRLYVMLDTIG 102

Query: 61  LVPKSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSW 120
            VPK QHRCPIP   DP+ + +P E T D+IV+NLTY  EDE   +     PLFGG+ SW
Sbjct: 103 FVPKPQHRCPIPVAYDPDKVLLPSENTADSIVRNLTYVTEDE---SSKSQFPLFGGNISW 159

Query: 121 LQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNIS 180
            +R+ESFKL   MKVHCGFM  GGAEMS LD +YVKKC+FVVA+GIFD YD PHQPSNIS
Sbjct: 160 SERDESFKLKPEMKVHCGFMPRGGAEMSSLDKEYVKKCRFVVATGIFDAYDEPHQPSNIS 219

Query: 181 RRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVP 240
           +RSK LFCFLMV+DEVSL F+RKN T+++D  GG+WVGIWRLILLK PPYDEPRRNGKVP
Sbjct: 220 KRSKNLFCFLMVVDEVSLDFLRKNTTVRKDVEGGKWVGIWRLILLKTPPYDEPRRNGKVP 279

Query: 241 KILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADAN 300
           KILTHRLFP+AQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHR+IYEEADA 
Sbjct: 280 KILTHRLFPEAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRNIYEEADAC 339

Query: 301 KRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNE 360
           KRRKRYARPL+D  MKIYRYEG+EPWSIKKNTVSDVPEGAVIIREHTA++NLFSCLWFNE
Sbjct: 340 KRRKRYARPLVDLHMKIYRYEGLEPWSIKKNTVSDVPEGAVIIREHTAMNNLFSCLWFNE 399

Query: 361 VNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELK 420
           V+LLTPRDQLSFGYVV RLKG FK +MF NCEYNSLF LHPH REHSSKIEWVKS  ELK
Sbjct: 400 VHLLTPRDQLSFGYVVDRLKGAFKVFMFQNCEYNSLFELHPHIREHSSKIEWVKSLQELK 459

Query: 421 GNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG 458
           G G S+ E RGG G WTPYPG+LD V LP V RTSKAG
Sbjct: 460 GKGESLKESRGGFGLWTPYPGDLDSVELPKVVRTSKAG 497

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	458
TAIR|locus:2121194	499	AT4G38500 [Arabidopsis thalian	0.993	0.911	0.772	6.6e-200
TAIR|locus:2032137	581	AT1G28240 [Arabidopsis thalian	0.727	0.573	0.405	5.6e-68
TAIR|locus:2037053	540	AT1G53040 [Arabidopsis thalian	0.727	0.616	0.392	2.3e-62
TAIR|locus:2009253	735	EMB2756 "EMBRYO DEFECTIVE 2756	0.746	0.465	0.371	7.9e-62
TAIR|locus:2136907	711	AT4G09630 [Arabidopsis thalian	0.735	0.473	0.377	7.9e-62
TAIR|locus:2056750	460	AT2G02910 [Arabidopsis thalian	0.735	0.732	0.378	1.9e-60
TAIR|locus:2165457	463	AT5G42660 [Arabidopsis thalian	0.644	0.637	0.392	4.8e-55
TAIR|locus:2162065	462	AT5G46220 [Arabidopsis thalian	0.698	0.692	0.341	4.5e-43

TAIR|locus:2121194 AT4G38500 [Arabidopsis thaliana (taxid:3702)]

 Score = 1935 (686.2 bits), Expect = 6.6e-200, P = 6.6e-200
 Identities = 354/458 (77%), Positives = 393/458 (85%)

Query:     1 MKIVWKRGFIRLVLVAGIAWMLLILVVLLFHVWSCQSSLAFFSAICNKQGKVFIMLDTMG 60
             +K +WK GF+RL+LV GI WMLLIL  LLFHVWSCQSSL+FFSAICNK+G++++MLDT+G
Sbjct:    45 LKKIWKAGFLRLLLVGGIVWMLLILFALLFHVWSCQSSLSFFSAICNKEGRLYVMLDTIG 104

Query:    61 LVPKSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSW 120
              VPK QHRCPIP   DP+ + +P ++T DTIV+NLTY  EDE   +     PLFGG+ SW
Sbjct:   105 FVPKPQHRCPIPVDYDPDKVLLPSDKTADTIVRNLTYVTEDE---SSKSQFPLFGGNISW 161

Query:   121 LQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNIS 180
              +REESFKL   MKVHCGFM  GGAEMS LD +YVKKC+FVVA+GIFD YD PHQPSNIS
Sbjct:   162 SEREESFKLKPEMKVHCGFMPRGGAEMSSLDKEYVKKCRFVVATGIFDAYDEPHQPSNIS 221

Query:   181 RRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVP 240
             +RS  LFCFLMV+DEVSL F+RKN T+++D  GG WVGIWRLILLK PPYDEPRRNGKVP
Sbjct:   222 KRSMNLFCFLMVVDEVSLDFLRKNTTVRKDVEGGIWVGIWRLILLKTPPYDEPRRNGKVP 281

Query:   241 KILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADAN 300
             KILTHRLFP+AQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHR+IYEEADA 
Sbjct:   282 KILTHRLFPEAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRNIYEEADAC 341

Query:   301 KRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNE 360
             KRRKRYARPL+D  MKIYRYEG+EPWSIKKNTVSDVPEGAVIIREHTA++NLFSCLWFNE
Sbjct:   342 KRRKRYARPLVDLHMKIYRYEGLEPWSIKKNTVSDVPEGAVIIREHTAMNNLFSCLWFNE 401

Query:   361 VNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELK 420
             V+LLTPRDQLSFGYVV RLKG FK +MF NCEYNSLF LHPH REHSSKIEWVKS  ELK
Sbjct:   402 VHLLTPRDQLSFGYVVDRLKGAFKVFMFQNCEYNSLFELHPHIREHSSKIEWVKSLQELK 461

Query:   421 GNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG 458
             G G S+ E RGG G WTPYPG+LD V LP V RTSKAG
Sbjct:   462 GKGESLKESRGGFGLWTPYPGDLDSVELPKVVRTSKAG 499

GO:0005739 "mitochondrion" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2032137 AT1G28240 [Arabidopsis thaliana (taxid:3702)]

 Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
 Identities = 141/348 (40%), Positives = 208/348 (59%)

Query:    69 CPIPTVDDPNTI-FIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSWLQREESF 127
             CP+  +     +  +P   +   ++KNLTY  E+            FGG+ +   R +SF
Sbjct:   168 CPVCYLPVEEAVALMPNAPSFSPVLKNLTYIYEEPLNRETEFGGSDFGGYPTLKHRNDSF 227

Query:   128 KLNSNMKVHCGFM------RNGGAEMSPLDVKYVKKCK-FVVASGIFDGYDVPHQPSNIS 180
              +   M VHCGF+      RN G ++   D+  +K+C+  VVAS +FD +D    P NIS
Sbjct:   228 DIKETMSVHCGFVKGPQPGRNTGFDIDEADLLEMKQCRGIVVASAVFDAFDDVKAPQNIS 287

Query:   181 RRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVP 240
             + +++  CF M +DE +   +++   +     G + VGIWR++++ + PY + RRNGKVP
Sbjct:   288 KYAEETVCFYMFVDEETESILKRERGLD----GNKKVGIWRVVVVHNLPYSDGRRNGKVP 343

Query:   241 KILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADAN 300
             K+L HR+FP A+YS+WIDGK+EL+VDP  ILER+LWR   TFAI++H     +  EA+AN
Sbjct:   344 KLLVHRMFPNARYSLWIDGKLELVVDPYQILERFLWRKNATFAISRHYKRFDVLVEAEAN 403

Query:   301 KRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTV-SDVPEGAVIIREHTALSNLFSCLWFN 359
             K   +Y    ID+Q+  Y+ EG+ P+S+ K  + SDVPEG VI+REH  +SNLF+CLWFN
Sbjct:   404 KAAGKYDNASIDFQVDFYKNEGLTPYSVAKLPITSDVPEGCVILREHVPISNLFTCLWFN 463

Query:   360 EVNLLTPRDQLSFGYVVYRL--KGLFKFYMFPNCEYNSLFVLHPHTRE 405
             EV+  T RDQ+SF  V  ++  K  +   MF +CE  +  V   H  E
Sbjct:   464 EVDRFTSRDQISFSTVRDKIAAKTNWTVSMFLDCERRNFVVQRYHRAE 511

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2037053 AT1G53040 [Arabidopsis thaliana (taxid:3702)]

 Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
 Identities = 137/349 (39%), Positives = 205/349 (58%)

Query:    69 CPIPTVDDPNTI-FIPKERTPDTIVKNLTYFLEDEFVH-NGSQSSPLFGGHQSWLQREES 126
             CP+  +     +  +PK      ++KNLTY  E+  V    S+    FGG+ S   R  S
Sbjct:   140 CPVCYLPPEEALAHMPKYPFESPLLKNLTYIREESPVKPEESEGGSEFGGYPSLEHRTNS 199

Query:   127 FKLNSNMKVHCGFMRN---GGAEMSPLDVKYVKKCK----FVVASGIFDGYDVPHQPSNI 179
             F +  +M VHCGF++    G      +D   + +       +VAS IF  YD+  +P NI
Sbjct:   200 FDIKESMTVHCGFIKGTKPGHQTGFDIDEDILHELDQSHDVIVASAIFGKYDIIQEPVNI 259

Query:   180 SRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKV 239
             S  ++K   F M +DE +  +++   +  +D+   + VG+WR+I++ + PY + RRNGKV
Sbjct:   260 SEMARKNIPFYMFVDEETHLYLKNTSSYTDDN---KRVGLWRIIVVHNVPYTDARRNGKV 316

Query:   240 PKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADA 299
             PK+L HRLFP  +YSIW+D K++L+VDP  ILER+LWR   +FAI++H     ++ EA+A
Sbjct:   317 PKLLLHRLFPNVRYSIWVDAKLQLVVDPYQILERFLWRTNSSFAISRHYRRFDVFVEAEA 376

Query:   300 NKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTV-SDVPEGAVIIREHTALSNLFSCLWF 358
             NK  ++Y    IDYQ++ Y+ EG+ P++  K  + SDVPEG  IIREH  ++NLF+C+WF
Sbjct:   377 NKAARKYDNASIDYQVEFYKKEGLTPYTEAKLPITSDVPEGCTIIREHIPITNLFTCVWF 436

Query:   359 NEVNLLTPRDQLSFGYV--VYRLKGLFKFYMFPNCEYNSLFVLHPHTRE 405
             NEV+  T RDQLSF       R K  +   MF +CE  + FV   + R+
Sbjct:   437 NEVDRFTSRDQLSFAIARDKIREKVDWSINMFLDCERRN-FVKQVYHRD 484

GO:0005739 "mitochondrion" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2009253 EMB2756 "EMBRYO DEFECTIVE 2756" [Arabidopsis thaliana (taxid:3702)]

 Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
 Identities = 135/363 (37%), Positives = 209/363 (57%)

Query:    64 KSQHRCPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSWLQR 123
             +S   C +  ++    I  P   T  +   +L Y  +++      Q  P F GHQS  +R
Sbjct:   372 RSSGSCEMKLLNSSQPIVEPLN-TRKSARFSLQYIEKEDKPDEEEQWEPRFAGHQSLQER 430

Query:   124 EESFKLNSNMKVHCGFMRN--G----GAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPS 177
             E+SF +  + K+HCGF++   G    G +++  D  Y+ +C   V+S IF   D    P+
Sbjct:   431 EDSF-VAQDKKIHCGFVKGPKGSSSTGFDLTEDDTNYISRCHIAVSSCIFGNSDRLRPPA 489

Query:   178 N--ISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRR 235
             N  ISR S+K  CF++ +DE++++ +        D AG  ++G+W+L+++K+ PY + RR
Sbjct:   490 NKMISRLSRKNVCFIVFVDEITMQTLSAEGHAP-DRAG--FIGLWKLVVVKNLPYADMRR 546

Query:   236 NGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYE 295
              GK+PK+L HRLFP A+YSIW+D K+ L +DPLLILE +LWR  H +AI+ H     ++E
Sbjct:   547 VGKIPKMLPHRLFPSARYSIWLDSKLRLQLDPLLILEYFLWRKGHEYAISNHYDRHCLWE 606

Query:   296 EADANKRRKRYARPLIDYQMKIYRYEGMEPWSIK---KNTVSDVPEGAVIIREHTALSNL 352
             E   NK+  +Y   +I+ Q + Y+ +G+  ++     K   S+VPEG+ I+R HT +SNL
Sbjct:   607 EVAQNKKLNKYNHTVINQQFQFYKADGLTRFNASDPFKLLPSNVPEGSFIVRAHTPMSNL 666

Query:   353 FSCLWFNEVNLLTPRDQLSFGYVVYRLKGL-----FKFYMFPNCEYNSLFVLHPHTREHS 407
             FSCLWFNEV   TPRDQLSF Y   +L+ +     F  +MF +CE   +  L  H  +  
Sbjct:   667 FSCLWFNEVERFTPRDQLSFAYTYQKLRRMNPDKPFNLHMFKDCERRKIAKLFRHRSDEK 726

Query:   408 SKI 410
               +
Sbjct:   727 RNL 729

GO:0005634 "nucleus" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0016021 "integral to membrane" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2136907 AT4G09630 [Arabidopsis thaliana (taxid:3702)]

 Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
 Identities = 135/358 (37%), Positives = 204/358 (56%)

Query:    69 CPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQSWLQREESFK 128
             C +  ++    I  P  +T +    +L Y   ++      Q  P F GHQS  +RE+SF 
Sbjct:   352 CEMKLLNSSQQIQEPL-KTQNFAAPSLQYIQMEDKPDGEEQWEPKFAGHQSLQEREDSF- 409

Query:   129 LNSNMKVHCGFMR--NG----GAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSN--IS 180
             L    K+HCGF++   G    G +++  D  Y+ KC   V S IF   D    P+N  +S
Sbjct:   410 LVQEQKIHCGFVKAPEGLPSTGFDLTEDDANYISKCHIAVISCIFGNSDRLRHPANKMVS 469

Query:   181 RRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVP 240
               S+K  CF++ +DE++++ +     +  D AG  +VG+W+L+++++ PY + RR GK+P
Sbjct:   470 SLSRKDVCFVVFVDEITMQTLSAEGQVP-DGAG--FVGLWKLVVVRNLPYTDMRRVGKIP 526

Query:   241 KILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADAN 300
             K+L HRLF  A+YSIW+D K+ L +DPL+ILE +LWR  H +AI+ H     ++EE   N
Sbjct:   527 KLLPHRLFTSARYSIWLDSKLRLQLDPLVILEYFLWREGHEYAISNHYDRHCLWEEVAQN 586

Query:   301 KRRKRYARPLIDYQMKIYRYEGMEPWSIK---KNTVSDVPEGAVIIREHTALSNLFSCLW 357
             K+  +Y   +ID Q + Y+ +G+  ++     K   S+VPEG+ I+REHT +SNLFSCLW
Sbjct:   587 KKLNKYNHTVIDQQFEFYQSDGLTRFNASDPHKLLPSNVPEGSFIVREHTPMSNLFSCLW 646

Query:   358 FNEVNLLTPRDQLSFGYVVYRLKGL-----FKFYMFPNCEYNSLFVLHPHTREHSSKI 410
             FNEV   TPRDQLSF Y   +L  +     F  +MF +CE   +  L  H  E    +
Sbjct:   647 FNEVERFTPRDQLSFAYTYQKLTRMNPDTPFNLHMFKDCERRKITKLFRHRSEEKRNL 704

GO:0005634 "nucleus" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2056750 AT2G02910 [Arabidopsis thaliana (taxid:3702)]

 Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
 Identities = 136/359 (37%), Positives = 201/359 (55%)

Query:    60 GLVPKSQHR-CPIPTVDDPNTIFIPKERTPDTIVKNLTYFLEDEFVHNGSQSSPLFGGHQ 118
             G   +++H  C +P  +  + I  P++        N T F    FV   +  +P FGGHQ
Sbjct:   107 GSKKRTKHLPCEVPLAESADRILEPQDYL------NFTRFSLG-FVETETYDNPRFGGHQ 159

Query:   119 SWLQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSN 178
             +  +RE S+    N  +HCGF++  G ++S  D  Y+K C   V+S IF   D   +P+ 
Sbjct:   160 TLSERERSYSA-VNQTIHCGFVKGTGFDLSEKDRAYMKNCVVSVSSCIFGSSDFLRRPAT 218

Query:   179 --ISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRN 236
               IS  SK+  CF+M +DE +L  +     +  D  G  +VG+W+ +++ + PY++ R+ 
Sbjct:   219 KKISEFSKRNVCFVMFVDEQTLSKLASEGHVP-DKQG--FVGLWKTVVVSNLPYNDMRKT 275

Query:   237 GKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEE 296
             GKVPK L+HRLFP ++YSIW+D KM L  DP+LI++ +LWR K  FAI+ H     +++E
Sbjct:   276 GKVPKFLSHRLFPSSRYSIWLDSKMRLTTDPMLIIDFFLWRTKSEFAISNHYDRHCVWDE 335

Query:   297 ADANKRRKRYARPLIDYQMKIYRYEGM---EPWSIKKNTVSDVPEGAVIIREHTALSNLF 353
                NKR  +Y    ID Q   YR +G+   +P        S VPEG+ I+R HT +SNLF
Sbjct:   336 VLQNKRLNKYNHSAIDEQFMFYRSDGLKKFDPSDPNSPLPSYVPEGSFIVRAHTPMSNLF 395

Query:   354 SCLWFNEVNLLTPRDQLSFGYVVYRLKGL-----FKFYMFPNCEYNSLFVLHPHTREHS 407
             +CLWFNEV+  T RDQLSF Y   +L+ L      +  MF +CE  +L  L  H  + S
Sbjct:   396 TCLWFNEVDRFTSRDQLSFAYTYLKLQRLNSDRPLRLNMFKDCERRALTKLFHHRVDSS 454

GO:0005739 "mitochondrion" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2165457 AT5G42660 [Arabidopsis thaliana (taxid:3702)]

 Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
 Identities = 118/301 (39%), Positives = 181/301 (60%)

Query:   106 NGSQSSPLFGGHQSWLQREESFKLNSNMKVHCGFMR-NGGAEMSPLDVKYVKKCKFVVAS 164
             NG++ + LF G+Q++ +RE SF++   + +HCGF   NGG  +S  D K++  C+ VV++
Sbjct:   161 NGTRFN-LFTGNQTFAERENSFQVRETVSLHCGFFNENGGFRISDKDKKFMTSCEVVVST 219

Query:   165 GIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLIL 224
               F G D  ++P  +S+ S +  C++   DEV+L   ++    K D      +G WR+++
Sbjct:   220 CAFGGGDNLYEPIGMSKTSSQKVCYVAFWDEVTLT-TQEAEGHKIDE--NDHIGKWRIVI 276

Query:   225 LKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAI 284
             +K  P+ + R NGK+PK+L HRLFP A+YSIW+D K +   DPL +L+  LWR     AI
Sbjct:   277 VKDLPFTDQRLNGKIPKMLAHRLFPDAKYSIWVDSKSQFRRDPLGVLDALLWRTNSVLAI 336

Query:   285 AQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIR 344
             ++H    S+Y+EA+A  ++ +     ++ Q+  YR++ + P   + N    + E +VI+R
Sbjct:   337 SEHGARSSVYDEANAVIKKHKATPEEVEVQINQYRHDKL-PEDKRFNGKKALSEASVIVR 395

Query:   345 EHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTR 404
             EHT L+NLF CLWFNEV   T RDQLSF YV++RLK L    MFP C    L     H R
Sbjct:   396 EHTPLTNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKVLKNINMFPVCTRKDLVNSIGHVR 455

Query:   405 E 405
             +
Sbjct:   456 K 456

GO:0005634 "nucleus" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2162065 AT5G46220 [Arabidopsis thaliana (taxid:3702)]

 Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 113/331 (34%), Positives = 175/331 (52%)

Query:   106 NGSQSSPLFGGHQSWLQREESFK-LNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVAS 164
             NG   S  FGG+ S  +R   F   N +++V CGF R+    +S  D   ++KC  VVAS
Sbjct:   112 NGKSES--FGGNFSTQKRFSYFNHSNIDVEVPCGFFRD--FPVSNSDRVEMEKCGLVVAS 167

Query:   165 GIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFI-RKNVTIKEDSAGGQWVGIWRLI 223
              IF+ +D   QP  +  ++ +  CF M +D+ +L  +   NV +K + +  + VG WR+I
Sbjct:   168 AIFNDHDKIRQPVGLGVKTLETVCFYMFIDDKTLNSLFHHNVILKNNPSDYR-VGAWRII 226

Query:   224 LLKHPP--YDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHT 281
              +      Y  P  NG +PK L HRLFP +++SIW+D K++L++DPLL++   L   +  
Sbjct:   227 KISKSENLYLNPAMNGVIPKYLIHRLFPNSKFSIWVDAKIQLMIDPLLLIHSMLVVPEVD 286

Query:   282 FAIAQHKHHRSIYEEADANKRRKRYAR-PLIDYQMKIYRYEGMEPWSIKKNTV-SDVPEG 339
              AI++H    +  EEA A  R K++     +  QM+ Y   G++PWS  K    +DVP+ 
Sbjct:   287 MAISKHPFFVNTMEEAMATARWKKWGDVDGLRIQMETYCEHGLKPWSSSKLPYPTDVPDT 346

Query:   340 AVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVL 399
             A+I+R H   SNLFSC  FNE+    PRDQL+F +V   +    K  MF    +  + V 
Sbjct:   347 ALILRRHGIRSNLFSCFMFNELEAFNPRDQLAFAFVRDHINPKVKMNMFEVEVFEQVVVE 406

Query:   400 HPHTREHSSKIEWVKSRDELKGNGSSMIEGR 430
             + H  +      + +  +E K      I+ R
Sbjct:   407 YRHNLKKIESSTYEEQEEEQKQESLRTIQKR 437


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.140   0.447    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      458       458   0.00095  118 3  11 22  0.48    33
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  624 (66 KB)
  Total size of DFA:  321 KB (2162 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  39.22u 0.11s 39.33t   Elapsed:  00:00:02
  Total cpu time:  39.22u 0.11s 39.33t   Elapsed:  00:00:02
  Start:  Sat May 11 06:58:58 2013   End:  Sat May 11 06:59:00 2013

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	458
pfam04765	306	pfam04765, DUF616, Protein of unknown function (DU	1e-178

>gnl|CDD|218253 pfam04765, DUF616, Protein of unknown function (DUF616)

 Score =  500 bits (1290), Expect = e-178
 Identities = 167/311 (53%), Positives = 213/311 (68%), Gaps = 7/311 (2%)

Query: 94  NLTYFLEDEFVHNGSQSSPLFGGHQSWLQREESFKLNSNMKVHCGFMR-NGGAEMSPLDV 152
           NLTY  E+E   N     PLFGG+QS  +RE SF     M VHCGF++ N G ++S  D 
Sbjct: 1   NLTYIEEEE--KNKGYGGPLFGGNQSLEERESSFDHKETMTVHCGFVKPNTGFDISESDR 58

Query: 153 KYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSA 212
           KY++KC+ VVAS IF  YD   QP  IS+RSKK  CF+M +DE +L  ++    + +D  
Sbjct: 59  KYMEKCRVVVASAIFGDYDKIRQPKGISKRSKKNVCFVMFVDEETLSTLKSEGHVPDD-- 116

Query: 213 GGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILE 272
               VG+WR++++K+ PY +PRRNGKVPK L HRLFP A+YSIW+D K++L+VDPLLILE
Sbjct: 117 -NGRVGLWRIVVVKNLPYTDPRRNGKVPKYLLHRLFPNARYSIWVDAKLQLVVDPLLILE 175

Query: 273 RYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWS-IKKN 331
           R+LWR    FAI++H     +YEEA+ANKR K+Y    ID QM+ Y  +G+ PWS  K  
Sbjct: 176 RFLWRTNSDFAISKHYFRHCVYEEAEANKRWKKYGDASIDEQMEFYCSDGLTPWSDPKLP 235

Query: 332 TVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNC 391
             SDVPEGAVI+REHT +SNLFSCLWFNEV+  T RDQLSF YV  +L+  FK  MF +C
Sbjct: 236 LPSDVPEGAVIVREHTPMSNLFSCLWFNEVDRFTSRDQLSFAYVRDKLRPKFKMNMFKDC 295

Query: 392 EYNSLFVLHPH 402
           E  SL VL+ H
Sbjct: 296 ERRSLVVLYRH 306

Family of uncharacterized proteins. Length = 306

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	458
PF04765	305	DUF616: Protein of unknown function (DUF616); Inte	100.0
cd04194	248	GT8_A4GalT_like A4GalT_like proteins catalyze the	92.84
cd00505	246	Glyco_transf_8 Members of glycosyltransferase fami	88.14
PF01501	250	Glyco_transf_8: Glycosyl transferase family 8; Int	87.53

>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function

Probab=100.00  E-value=2.1e-115  Score=867.17  Aligned_cols=304  Identities=51%  Similarity=0.938  Sum_probs=295.2

Q ss_pred             eeeEeeeccccCCCCCCCCCCCCCCChhhhhhccCCCCceeeecccccCCCCCCChhhHHHhhcCCEEEEEeeecCCCCC
Q 012702           94 NLTYFLEDEFVHNGSQSSPLFGGHQSWLQREESFKLNSNMKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVP  173 (458)
Q Consensus        94 ~l~yi~~~~~~~~~~~~~~~FgG~~s~~~R~~sf~~~~~~~v~CGF~~~~gf~i~e~d~~~m~~ckvVVyTaIFG~YD~L  173 (458)
                      ||+||.+|+++.  +.++++|||||||+||++||+++++|+|||||++++||||||.|+.||++|+|||||||||+||+|
T Consensus         1 nl~y~~~~~~~~--~~~~~~f~g~~s~~~R~~sf~~~~~~~v~Cgf~~~~gf~i~~~d~~~m~~c~vvV~saIFG~yD~l   78 (305)
T PF04765_consen    1 NLTYIEEENKPE--SGRGPSFGGNQSLEERESSFDIQEDMTVHCGFVKNTGFDISESDRRYMEKCRVVVYSAIFGNYDKL   78 (305)
T ss_pred             CCcccccccccc--cCCCCCcCCcCCHHHHHHhcCCCCCceeccccccCCCCCCCHHHHHHHhcCCEEEEEEecCCCccc
Confidence            799999998555  899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccCcceeEEEEEeehhhHHHHhhccccccCCCCCceeeceEEEEcCCCCCCCccccCCccccccccCCCCCCE
Q 012702          174 HQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQY  253 (458)
Q Consensus       174 ~~P~~is~~s~d~VCF~mF~De~t~~~l~~~~~~~~D~~~~~~vg~WrIV~V~~lpy~d~rrngRipKiLpHrLFPny~y  253 (458)
                      +||+++++.++++|||+||||++|+++|++++.++   ++++++|+||||+|+++||+|+|||||+||+|||+|||||+|
T Consensus        79 ~qP~~i~~~s~~~vcf~mF~D~~t~~~l~~~~~~~---~~~~~ig~WrIv~v~~lp~~d~rr~~r~~K~lpHrlfp~y~y  155 (305)
T PF04765_consen   79 RQPKNISEYSKKNVCFFMFVDEETLKSLESEGHIP---DENKKIGIWRIVVVKNLPYDDPRRNGRIPKLLPHRLFPNYDY  155 (305)
T ss_pred             cCchhhCHHHhcCccEEEEEehhhHHHHHhcCCcc---ccccccCceEEEEecCCCCcchhhcCcccceeccccCCCCce
Confidence            99999999999999999999999999999998875   356799999999999999999999999999999999999999


Q ss_pred             EEEEecceEEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhcCCChhHHHHHHHHHHHcCCCCcccCC-CC
Q 012702          254 SIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKK-NT  332 (458)
Q Consensus       254 SIWIDgkiqL~~DP~~lLe~~Lwr~~~~~Ais~Hp~R~cVYEEA~a~~~~~K~~~~~I~~Qm~~Y~~eGlp~~~~~k-p~  332 (458)
                      ||||||||+|++||++||+++||+++++|||++||.|+||||||+||++++|++++.|++||++|+++|||+|++.| |+
T Consensus       156 SIWID~ki~L~~Dp~~lie~~l~~~~~~~Ai~~H~~R~cvyeEa~a~~~~~k~~~~~I~~Qm~~Y~~eGlp~~s~~k~~l  235 (305)
T PF04765_consen  156 SIWIDGKIQLIVDPLLLIERFLWRKNADIAISKHPERNCVYEEAEACKRLGKYDPERIDEQMEFYKQEGLPPWSPAKLPL  235 (305)
T ss_pred             EEEEeeeEEEecCHHHHHHHHHhcCCCcEEEeCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHHHHcCCCccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999997665 88


Q ss_pred             CCCCCcceEEEccCCcchhhhHHHHHHHHhccCCCCcccHHHHHHHhcCcceeccccccccCCceeEecC
Q 012702          333 VSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPH  402 (458)
Q Consensus       333 ~sgLpE~~vIiR~Ht~~snlf~clWfnEv~rft~RDQLSF~Yvl~Klg~~~~~~Mf~~c~rn~~f~~~~H  402 (458)
                      .+|||||+||||+|++++|+|||+|||||++||+||||||+||+||++.++++|||+||+|++++++++|
T Consensus       236 ~s~v~E~~iIiR~H~~~~nlf~clWfnEv~rfs~RDQLSF~Yv~wk~~~~~~~~mf~~~~~~~~~~~~~h  305 (305)
T PF04765_consen  236 PSDVPEGNIIIRKHNPMSNLFMCLWFNEVERFSPRDQLSFPYVLWKLGPKFKLNMFKDCERRQLVVLYRH  305 (305)
T ss_pred             ccCCccceEEEecCCchhHHHHHHHHHHHhcCCCcccchHHHHHHHhCCcccchhhhHHHHHHHHHhcCC
Confidence            8999999999999999999999999999999999999999999999999999999999999999999998

The function of is unknown although a number of the members are thought to be glycosyltransferases.

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface

Probab=92.84  E-value=0.2  Score=47.92  Aligned_cols=110  Identities=16%  Similarity=0.181  Sum_probs=69.5

Q ss_pred             ccccccccCCCCCCEEEEEecceEEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhcCCChhHHHHHHHHH
Q 012702          239 VPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIY  318 (458)
Q Consensus       239 ipKiLpHrLFPny~ySIWIDgkiqL~~DP~~lLe~~Lwr~~~~~Ais~Hp~R~cVYEEA~a~~~~~K~~~~~I~~Qm~~Y  318 (458)
                      +.|++...+||+++.-||+|+-+.+.+|+..|.+.-+  ++..+|+..|.....   +..    . +             
T Consensus        84 y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~--~~~~~aa~~d~~~~~---~~~----~-~-------------  140 (248)
T cd04194          84 YYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDL--GDNLLAAVRDPFIEQ---EKK----R-K-------------  140 (248)
T ss_pred             HHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCc--CCCEEEEEecccHHH---HHH----H-H-------------
Confidence            3478899999999999999999999999999987544  567788877643111   000    0 0             


Q ss_pred             HHcCCCCcccCCCCCCCCCcceEEEccCC-----cchhhhHHHHHHHHh-ccCCCCcccHHHHHHHh
Q 012702          319 RYEGMEPWSIKKNTVSDVPEGAVIIREHT-----ALSNLFSCLWFNEVN-LLTPRDQLSFGYVVYRL  379 (458)
Q Consensus       319 ~~eGlp~~~~~kp~~sgLpE~~vIiR~Ht-----~~snlf~clWfnEv~-rft~RDQLSF~Yvl~Kl  379 (458)
                      ...+.++       ..+.+-+||++=+-.     ...+.+. .|..+.. ++.-.||-.++.+.+..
T Consensus       141 ~~~~~~~-------~~~yfNsGv~l~nl~~~r~~~~~~~~~-~~~~~~~~~~~~~DQd~LN~~~~~~  199 (248)
T cd04194         141 RRLGGYD-------DGSYFNSGVLLINLKKWREENITEKLL-ELIKEYGGRLIYPDQDILNAVLKDK  199 (248)
T ss_pred             hhcCCCc-------ccceeeecchheeHHHHHHhhhHHHHH-HHHHhCCCceeeCChHHHHHHHhCC
Confidence            1122221       234566778774322     1222223 2333322 36679999999998874

The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys

>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis

Probab=88.14  E-value=2.8  Score=40.47  Aligned_cols=160  Identities=15%  Similarity=0.159  Sum_probs=94.8

Q ss_pred             eeEEEEEeehhhHHHHhhccccccCCCCCceeeceEEEEcCCCCCC------CccccCCccccccccCCCCCCEEEEEec
Q 012702          186 LFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYD------EPRRNGKVPKILTHRLFPQAQYSIWIDG  259 (458)
Q Consensus       186 ~VCF~mF~De~t~~~l~~~~~~~~D~~~~~~vg~WrIV~V~~lpy~------d~rrngRipKiLpHrLFPny~ySIWIDg  259 (458)
                      .+.|..++|+.+....+.-..+. ..    ....-+++.++...+.      ......-+.|++..++||+++--||+|+
T Consensus        30 ~~~~~il~~~is~~~~~~L~~~~-~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~y~RL~i~~llp~~~kvlYLD~  104 (246)
T cd00505          30 PLRFHVLTNPLSDTFKAALDNLR-KL----YNFNYELIPVDILDSVDSEHLKRPIKIVTLTKLHLPNLVPDYDKILYVDA  104 (246)
T ss_pred             CeEEEEEEccccHHHHHHHHHHH-hc----cCceEEEEeccccCcchhhhhcCccccceeHHHHHHHHhhccCeEEEEcC
Confidence            57788888876654332211110 00    0123455555422221      2233444789999999999999999999


Q ss_pred             ceEEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhcCCChhHHHHHHHHH-HHcCCCCcccCCCCCCCCCc
Q 012702          260 KMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIY-RYEGMEPWSIKKNTVSDVPE  338 (458)
Q Consensus       260 kiqL~~DP~~lLe~~Lwr~~~~~Ais~Hp~R~cVYEEA~a~~~~~K~~~~~I~~Qm~~Y-~~eGlp~~~~~kp~~sgLpE  338 (458)
                      -+.+..|+.+|.+--+  ++..+|+..-..-  .        ...           +.| +..|++.       ....+-
T Consensus       105 D~iv~~di~~L~~~~l--~~~~~aav~d~~~--~--------~~~-----------~~~~~~~~~~~-------~~~yfN  154 (246)
T cd00505         105 DILVLTDIDELWDTPL--GGQELAAAPDPGD--R--------REG-----------KYYRQKRSHLA-------GPDYFN  154 (246)
T ss_pred             CeeeccCHHHHhhccC--CCCeEEEccCchh--h--------hcc-----------chhhcccCCCC-------CCCcee
Confidence            9999999999998666  5667887754210  0        000           111 1233431       123566


Q ss_pred             ceEEEccCCcc-----hhhhHHHHHHHHhccCCCCcccHHHHHHHhc
Q 012702          339 GAVIIREHTAL-----SNLFSCLWFNEVNLLTPRDQLSFGYVVYRLK  380 (458)
Q Consensus       339 ~~vIiR~Ht~~-----snlf~clWfnEv~rft~RDQLSF~Yvl~Klg  380 (458)
                      ++|++=+-...     .......|.+...+..--||=.++.+....+
T Consensus       155 sGVmlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~  201 (246)
T cd00505         155 SGVFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQVP  201 (246)
T ss_pred             eeeEEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcCC
Confidence            88888444332     2223334555556788899999999887764

Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=87.53  E-value=0.93  Score=41.95  Aligned_cols=113  Identities=13%  Similarity=0.133  Sum_probs=64.3

Q ss_pred             CccccccccCCCCCCEEEEEecceEEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhcCCChhHHHHHHHH
Q 012702          238 KVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKI  317 (458)
Q Consensus       238 RipKiLpHrLFPny~ySIWIDgkiqL~~DP~~lLe~~Lwr~~~~~Ais~Hp~R~cVYEEA~a~~~~~K~~~~~I~~Qm~~  317 (458)
                      -+.|++.+.+||+|+--||+|+-+.+.+|+..+.+.-+  ++..+|+...                         .....
T Consensus        86 ~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~--~~~~~~a~~~-------------------------~~~~~  138 (250)
T PF01501_consen   86 TFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDL--QGKYLAAVED-------------------------ESFDN  138 (250)
T ss_dssp             GGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC-----TTSSEEEEE-----------------------------HH
T ss_pred             HHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccc--hhhhcccccc-------------------------chhhh
Confidence            35689999999999999999999999999999998666  4666777766                         00111


Q ss_pred             HHHcCCCCcccCC-CCCCCCCcceEEEccCCcch-hhhHHHHHHHHh----ccCCCCcccHHHHHHH
Q 012702          318 YRYEGMEPWSIKK-NTVSDVPEGAVIIREHTALS-NLFSCLWFNEVN----LLTPRDQLSFGYVVYR  378 (458)
Q Consensus       318 Y~~eGlp~~~~~k-p~~sgLpE~~vIiR~Ht~~s-nlf~clWfnEv~----rft~RDQLSF~Yvl~K  378 (458)
                      +- .+-....... +...+.+-+||++=+-.... +.+...+-+.++    +..-.||=-++++...
T Consensus       139 ~~-~~~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~  204 (250)
T PF01501_consen  139 FP-NKRFPFSERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFYG  204 (250)
T ss_dssp             HH-TSTTSSEEECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTT
T ss_pred             hh-hcccchhhcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhccc
Confidence            11 1111111111 23456778888884433221 222222222222    2455899999998873

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	458
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 2e-06
 Identities = 58/433 (13%), Positives = 122/433 (28%), Gaps = 138/433 (31%)

Query: 30  FHVWSCQSSLAFFSAICNKQGKVFIMLDTMG------LVPKSQHRCPIPTVDD--PNTIF 81
           ++V   Q  L    A+   +    +++D +       +       C    V       IF
Sbjct: 129 YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV---CLSYKVQCKMDFKIF 185

Query: 82  ---IPKERTPDTIVK---NLTYFLEDEFVHNGSQSSPLFGGHQSWLQREESFKLNSNMKV 135
              +    +P+T+++    L Y ++  +      SS +       +Q E    L S    
Sbjct: 186 WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL-RIHSIQAELRRLLKSKPYE 244

Query: 136 HCGFMRNGGAEMSPL----DVKYVK-------KCKFVVASGIFDGYDVPHQPSNISRRSK 184
           +C            L    +V+  K        CK ++ +                 R K
Sbjct: 245 NC------------LLVLLNVQNAKAWNAFNLSCKILLTT-----------------RFK 275

Query: 185 KLFCFLMV--MDEVSLKFIRKNVTIKEDSAG--GQWVGIWRLILLKHPPYDEPRRNGKV- 239
           ++  FL       +SL      +T  ++      +++           P D PR      
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLT-PDEVKSLLLKYLDC--------RPQDLPREVLTTN 326

Query: 240 PKILTHRLFPQ------AQYSIW----IDGKMELI------VDPLLILERY--------- 274
           P      +  +      A +  W     D    +I      ++P    + +         
Sbjct: 327 P--RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS 384

Query: 275 ----------LWRGKHTF---AIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYE 321
                     +W          +    H  S+       K+ K     +    +++    
Sbjct: 385 AHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL-----VEKQPKESTISIPSIYLEL---- 435

Query: 322 GMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPR-DQLSFGYVVYRLK 380
                   K  + +       I +H  +   F        +L+ P  DQ  + ++ + LK
Sbjct: 436 --------KVKLENEYALHRSIVDHYNIPKTF-DSD----DLIPPYLDQYFYSHIGHHLK 482

Query: 381 GLF---KFYMFPN 390
            +    +  +F  
Sbjct: 483 NIEHPERMTLFRM 495

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	458
d1ga8a_	282	Galactosyltransferase LgtC {Neisseria meningitidis	83.32

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=83.32  E-value=0.56  Score=41.79  Aligned_cols=108  Identities=10%  Similarity=0.093  Sum_probs=71.0

Q ss_pred             ccccccccCCCCCCEEEEEecceEEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhcCCChhHHHHHHHHH
Q 012702          239 VPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIY  318 (458)
Q Consensus       239 ipKiLpHrLFPny~ySIWIDgkiqL~~DP~~lLe~~Lwr~~~~~Ais~Hp~R~cVYEEA~a~~~~~K~~~~~I~~Qm~~Y  318 (458)
                      +.|++.+.+||+++-.||+|+=+.+..|+..|.+--+  ++..+|+..+...                     ..+-...
T Consensus        84 y~Rl~l~~~lp~~~kiiyLD~D~iv~~dl~~L~~~~~--~~~~~aa~~d~~~---------------------~~~~~~~  140 (282)
T d1ga8a_          84 YARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDL--GDNWLGASIDLFV---------------------ERQEGYK  140 (282)
T ss_dssp             GGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCC--TTCSEEEEECHHH---------------------HTSTTHH
T ss_pred             HHHHHHhhhCCccceEEEecCCEEEecchHHHHhccc--ccceeeeehhhhh---------------------hhhhhhH
Confidence            4567888899999999999999999999999886444  4566777654211                     1111233


Q ss_pred             HHcCCCCcccCCCCCCCCCcceEEEccCC-----cchhhhHHHHHHHHh-ccCCCCcccHHHHHH
Q 012702          319 RYEGMEPWSIKKNTVSDVPEGAVIIREHT-----ALSNLFSCLWFNEVN-LLTPRDQLSFGYVVY  377 (458)
Q Consensus       319 ~~eGlp~~~~~kp~~sgLpE~~vIiR~Ht-----~~snlf~clWfnEv~-rft~RDQLSF~Yvl~  377 (458)
                      ...|+++       ....+-+||++-+..     .....++ .|.++.. .+.--||=.++.+..
T Consensus       141 ~~~~~~~-------~~~yfNsGVml~n~~~~r~~~~~~~~~-~~~~~~~~~~~~~DQd~LN~~f~  197 (282)
T d1ga8a_         141 QKIGMAD-------GEYYFNAGVLLINLKKWRRHDIFKMSS-EWVEQYKDVMQYQDQDILNGLFK  197 (282)
T ss_dssp             HHTTCCT-------TSCCEEEEEEEECHHHHTTSCHHHHHH-HHHHHHTTTCSSTHHHHHHHHHT
T ss_pred             HHhCCCC-------CCceeecceeeechhhhhhhhHHHHHH-HHHHhcccCcccCchhHHHHHhc
Confidence            4456653       345677889886442     2344455 4455543 355589999997764