Citrus Sinensis ID: 012705

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------46

MGQDNFTPLKRSSTGAAAGGVLPTTNAASAANGRTGRGAMPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNFSSPDEETINQQLIEEANRVLAEIRSDVDPDDPDEPSDSETNPNATYSLGPKISSWDLDRKAWLSHNAEFPSHVDGKPKILLVTGSTPKPCDNPIGDHYLLKSVKNKIDYCRLHGIEIIYNMAHLDKELSGYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDMVFELPMDKYKDYNLVVHGYHDLMFIQKSWIALNTGSFLFRNCQWSLDLLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFIESEFYLHGYWVGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLKSMERAFNFADNQVIKLYGFGHRGLLSPKIKRIRNDTTAPLEFVDQFRHSVTDKSGSQN

ccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHHHHccccEEEEEEccccccccccccccccccccccccccccccEEEccccccccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccEEEEccEEEcccccccccHHHHHHHcccccccccccccEEEccccccccccccccHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccccccccHHHHHHccccccccccccc

cccccccccEccccccccccccccccccccccccccccccHHHHHHHHHHHHcHEHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccEEEEEEccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEcHHccHHHcHHHHHHHHHHHHHHHccccEEEEEEcccEEEEcccccccHHHcccccEEEccccHHEEEEcccccccccEEEEEccHHHHHHHHHHccccccccHHHHHcHHHHHHHcccccccHHHHHHHHHHHHHccHHHHccEEEccHHHHccHHHHHHHHHHHHHHHcccccccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEcccccccccccHHHHcccccccccccc

mgqdnftplkrsstgaaaggvlpttnaasaangrtgrgamprgrqIQKTFNNIKITILCGFVTILVLRGtigvnfsspdeETINQQLIEEANRVLAEIrsdvdpddpdepsdsetnpnatyslgpkisswdlDRKAWlshnaefpshvdgkpkillvtgstpkpcdnpigdhyllKSVKNKIDYCRLHGIEIIYNMAHLDKELSGYWAKLPLLRKLmlshpeiewiwwmdsdamFTDMVFElpmdkykdynlvvHGYHDLMFIQKSWIALNTGSFLFRNCQWSLDLLdawapygpkgvirdEAGKIMTAYLkgrpafeaddQSALIYLLLTQKDKWIDKVFIESEFYLHGYWVGLVDRYEEMMEkyhpglgderwpfvthfvgckpcgsygdypveRCLKSMERAFNFadnqviklygfghrgllspkikrirndttaplefVDQFRhsvtdksgsqn

mgqdnftplkrsstgaaaggvlpttnaasaangrtgrgamprgRQIQKTFNNIKITILCGFVTILVLRGTIGVNFSSPDEETINQQLIEEANRVLAEIRSDVdpddpdepsdsetnpnatyslgpkisSWDLDRKAWLSHNaefpshvdgkpKILLVTGSTPKPCDNPIGDHYLLKSVKNKIDYCRLHGIEIIYNMAHLDKELSGYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDMVFELPMDKYKDYNLVVHGYHDLMFIQKSWIALNTGSFLFRNCQWSLDLLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFIESEFYLHGYWVGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLKSMERAFNFADNQVIKLYGFGHRGLLSPKIKRIRNDTTAPlefvdqfrhsvtdksgsqn

MGQDNFTPLKRSSTGAAAGGVLPTTNAASAANGRTGRGAMPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNFSSPDEETINQQLIEEANRVLAEIRsdvdpddpdepsdseTNPNATYSLGPKISSWDLDRKAWLSHNAEFPSHVDGKPKILLVTGSTPKPCDNPIGDHYLLKSVKNKIDYCRLHGIEIIYNMAHLDKELSGYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDMVFELPMDKYKDYNLVVHGYHDLMFIQKSWIALNTGSFLFRNCQWSLDLLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFIESEFYLHGYWVGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLKSMERAFNFADNQVIKLYGFGHRGLLSPKIKRIRNDTTAPLEFVDQFRHSVTDKSGSQN

*********************************************IQKTFNNIKITILCGFVTILVLRGTIGVNFS**************************************************ISSWDLDRKAWLSHNAEFPSHVDGKPKILLVTGSTPKPCDNPIGDHYLLKSVKNKIDYCRLHGIEIIYNMAHLDKELSGYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDMVFELPMDKYKDYNLVVHGYHDLMFIQKSWIALNTGSFLFRNCQWSLDLLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFIESEFYLHGYWVGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLKSMERAFNFADNQVIKLYGFGHRGLLSPKIKRIRNDTTAPLEFVDQ*************

************************************************TFNNIKITILCGFVTILVLRGTIGVNFSS************************************ETNPNATYSLGPKISSWDLDRKAWL**************KILLVTGSTPKPCDNPIGDHYLLKSVKNKIDYCRLHGIEIIYNMAHLDKELSGYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDMVFELPMDKYKDYNLVVHGYHDLMFIQKSWIALNTGSFLFRNCQWSLDLLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFIESEFYLHGYWVGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLKSMERAFNFADNQVIKLYGFGHRGLLSPKIKRIRNDTTAPLEFV***************

MGQDNFTPLKRSSTGAAAGGVLPTTNAASAANGRTGRGAMPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNFSSPDEETINQQLIEEANRVLAEIRSDV**************PNATYSLGPKISSWDLDRKAWLSHNAEFPSHVDGKPKILLVTGSTPKPCDNPIGDHYLLKSVKNKIDYCRLHGIEIIYNMAHLDKELSGYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDMVFELPMDKYKDYNLVVHGYHDLMFIQKSWIALNTGSFLFRNCQWSLDLLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFIESEFYLHGYWVGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLKSMERAFNFADNQVIKLYGFGHRGLLSPKIKRIRNDTTAPLEFVDQFRH**********

**************************************AMPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNFSSPDEETINQQLIEEANRVLAEIRS*********PSDSETNPNATYSLGPKISSWDLDRKAWLSHNAEFPSHVDGKPKILLVTGSTPKPCDNPIGDHYLLKSVKNKIDYCRLHGIEIIYNMAHLDKELSGYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDMVFELPMDKYKDYNLVVHGYHDLMFIQKSWIALNTGSFLFRNCQWSLDLLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFIESEFYLHGYWVGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLKSMERAFNFADNQVIKLYGFGHRGLLSPKIKRIRNDTTAPLEFV*QFR***********

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		458	2.2.26 [Sep-21-2011]
Q9LF80		457	Putative glycosyltransfer	yes	no	0.958	0.960	0.759	0.0
Q9CA75		457	Putative glycosyltransfer	no	no	0.967	0.969	0.758	0.0
Q9M9U0		513	Putative glycosyltransfer	no	no	0.919	0.820	0.623	1e-175
O22775		461	Putative glycosyltransfer	no	no	0.884	0.878	0.595	1e-151
Q9LZJ3		460	Xyloglucan 6-xylosyltrans	no	no	0.877	0.873	0.590	1e-151
Q564G7		435	Galactomannan galactosylt	N/A	no	0.794	0.836	0.398	1e-85
O81007		449	Putative glycosyltransfer	no	no	0.853	0.870	0.372	2e-78
Q9SZG1		432	Glycosyltransferase 6 OS=	no	no	0.676	0.717	0.415	3e-78
O94622		375	Uncharacterized alpha-1,2	yes	no	0.296	0.362	0.242	2e-07
P50108		393	Probable alpha-1,6-mannos	yes	no	0.248	0.290	0.268	2e-05

>sp\|Q9LF80\|GT3_ARATH Putative glycosyltransferase 3 OS=Arabidopsis thaliana GN=GT3 PE=2 SV=1	Back alignment and function desciption

 Score =  733 bits (1892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/445 (75%), Positives = 393/445 (88%), Gaps = 6/445 (1%)

Query: 3   QDNFTPLKRSSTGA-AAGGVLPTTNAASAANGRTGRGAMPRGRQIQKTFNNIKITILCGF 61
           +D F   KR ST + AA GVLPTT A+        R   PRGRQIQKTFNN+K+TILCGF
Sbjct: 4   EDGFRTQKRVSTASSAAAGVLPTTMASGGV-----RRPPPRGRQIQKTFNNVKMTILCGF 58

Query: 62  VTILVLRGTIGVNFSSPDEETINQQLIEEANRVLAEIRSDVDPDDPDEPSDSETNPNATY 121
           VTILVLRGTIG+NF + D + +NQ +IEE NR+LAEIRSD DP D +EP DS+ + N TY
Sbjct: 59  VTILVLRGTIGINFGTSDADVVNQNIIEETNRLLAEIRSDSDPTDSNEPPDSDLDLNMTY 118

Query: 122 SLGPKISSWDLDRKAWLSHNAEFPSHVDGKPKILLVTGSTPKPCDNPIGDHYLLKSVKNK 181
           +LGPKI++WD  RK WL+ N +FPS ++GK K+LL+TGS PKPCDNPIGDHYLLKSVKNK
Sbjct: 119 TLGPKITNWDQKRKLWLTQNPDFPSFINGKAKVLLLTGSPPKPCDNPIGDHYLLKSVKNK 178

Query: 182 IDYCRLHGIEIIYNMAHLDKELSGYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDMVFE 241
           IDYCR+HGIEI+YNMAHLDKEL+GYWAKLP++R+LMLSHPEIEWIWWMDSDA+FTDMVFE
Sbjct: 179 IDYCRIHGIEIVYNMAHLDKELAGYWAKLPMIRRLMLSHPEIEWIWWMDSDALFTDMVFE 238

Query: 242 LPMDKYKDYNLVVHGYHDLMFIQKSWIALNTGSFLFRNCQWSLDLLDAWAPYGPKGVIRD 301
           +P+ +Y+++NLV+HGY DL+F QKSWIALNTGSFLFRNCQWSLDLLDAWAP GPKG IR+
Sbjct: 239 IPLSRYENHNLVIHGYPDLLFDQKSWIALNTGSFLFRNCQWSLDLLDAWAPMGPKGPIRE 298

Query: 302 EAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFIESEFYLHGYWVGLVDRYEE 361
           EAGKI+TA LKGRPAFEADDQSALIYLLL+QK+ W++KVF+E+++YLHG+W GLVD+YEE
Sbjct: 299 EAGKILTANLKGRPAFEADDQSALIYLLLSQKETWMEKVFVENQYYLHGFWEGLVDKYEE 358

Query: 362 MMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLKSMERAFNFADNQVIKLYGFGH 421
           MMEKYHPGLGDERWPF+THFVGCKPCGSY DY VERCLKSMERAFNFADNQV+KLYGFGH
Sbjct: 359 MMEKYHPGLGDERWPFITHFVGCKPCGSYADYAVERCLKSMERAFNFADNQVLKLYGFGH 418

Query: 422 RGLLSPKIKRIRNDTTAPLEFVDQF 446
           RGLLSPKIKRIRN+TT PL+FVD+F
Sbjct: 419 RGLLSPKIKRIRNETTFPLKFVDRF 443

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -

>sp\|Q9CA75\|GT5_ARATH Putative glycosyltransferase 5 OS=Arabidopsis thaliana GN=GT5 PE=2 SV=1	Back alignment and function description

>sp\|Q9M9U0\|GT4_ARATH Putative glycosyltransferase 4 OS=Arabidopsis thaliana GN=GT4 PE=2 SV=1	Back alignment and function description

>sp\|O22775\|GT2_ARATH Putative glycosyltransferase 2 OS=Arabidopsis thaliana GN=GT2 PE=2 SV=1	Back alignment and function description

>sp\|Q9LZJ3\|XT1_ARATH Xyloglucan 6-xylosyltransferase OS=Arabidopsis thaliana GN=XT1 PE=1 SV=1	Back alignment and function description

>sp\|Q564G7\|GMGT1_CYATE Galactomannan galactosyltransferase 1 OS=Cyamopsis tetragonoloba GN=GMGT1 PE=1 SV=1	Back alignment and function description

>sp\|O81007\|GT7_ARATH Putative glycosyltransferase 7 OS=Arabidopsis thaliana GN=GT7 PE=2 SV=1	Back alignment and function description

>sp\|Q9SZG1\|GT6_ARATH Glycosyltransferase 6 OS=Arabidopsis thaliana GN=GT6 PE=2 SV=1	Back alignment and function description

>sp\|O94622\|YBKD_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C1289.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1289.13c PE=3 SV=1	Back alignment and function description

>sp\|P50108\|MNN10_YEAST Probable alpha-1,6-mannosyltransferase MNN10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNN10 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		458
255547325		454	Xyloglucan 6-xylosyltransferase, putativ	0.975	0.984	0.782	0.0
15240848		457	xyloglucan 6-xylosyltransferase [Arabido	0.958	0.960	0.759	0.0
297806809		457	galactosyl transferase GMA12/MNN10 famil	0.958	0.960	0.764	0.0
449440814		460	PREDICTED: putative glycosyltransferase	0.960	0.956	0.774	0.0
449440812		460	PREDICTED: putative glycosyltransferase	0.982	0.978	0.761	0.0
449477203		460	PREDICTED: putative glycosyltransferase	0.960	0.956	0.772	0.0
449477207		460	PREDICTED: putative glycosyltransferase	0.982	0.978	0.761	0.0
297839313		457	galactosyl transferase GMA12/MNN10 famil	0.967	0.969	0.758	0.0
225457345		450	PREDICTED: putative glycosyltransferase	0.954	0.971	0.778	0.0
356512016		447	PREDICTED: putative glycosyltransferase	0.958	0.982	0.760	0.0

>gi\|255547325\|ref\|XP_002514720.1\| Xyloglucan 6-xylosyltransferase, putative [Ricinus communis] gi\|223546324\|gb\|EEF47826.1\| Xyloglucan 6-xylosyltransferase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  751 bits (1938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/460 (78%), Positives = 401/460 (87%), Gaps = 13/460 (2%)

Query: 1   MGQDNFTPLKRSSTGAAAGGVLPTTNAASAANGRT---GRGAMPRGRQIQKTFNNIKITI 57
           M QDN T  ++  +G   GG LPTT     ANGR    GR AMPRGRQI KTFNNIKITI
Sbjct: 1   MKQDNTT--QKRGSGGGGGGGLPTT-----ANGRVVGGGRSAMPRGRQIHKTFNNIKITI 53

Query: 58  LCGFVTILVLRGTIGV-NFSSPDEETINQQLIEEANRVLAEIRSDVDPDDPDEPSDSETN 116
           LCGFVTILVLRGTIG+ + +S D E INQ LIEE NR+LAEIRSD DP DPDEP + E N
Sbjct: 54  LCGFVTILVLRGTIGIGSLTSSDAEAINQNLIEETNRILAEIRSDNDPTDPDEPPELEIN 113

Query: 117 PNATYSLGPKISSWDLDRKAWLSHNAEFPSHVDGKPKILLVTGSTPKPCDNPIGDHYLLK 176
           PN TY+LGPKI +WD +RK W + N EFPS V+GKP+ILL+TGS P PCDNPIGDHYLLK
Sbjct: 114 PNVTYTLGPKIENWDQERKVWRNQNPEFPSFVNGKPRILLLTGSPPSPCDNPIGDHYLLK 173

Query: 177 SVKNKIDYCRLHGIEIIYNMAHLDKELSGYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFT 236
           ++KNKIDYCR+HGIEI+YNMAHLDKEL+GYWAKLP++R+LMLSHPE+EWIWWMDSDAMFT
Sbjct: 174 AIKNKIDYCRIHGIEIVYNMAHLDKELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAMFT 233

Query: 237 DMVFELPMDKYKDYNLVVHGYHDLMFIQKSWIALNTGSFLFRNCQWSLDLLDAWAPYGPK 296
           DMVFE+P+ KY  +NLV+HGY DL+F QKSWIALNTGSFLFRNCQWSLDLLDAWAP GPK
Sbjct: 234 DMVFEIPLSKYDKHNLVIHGYPDLLFDQKSWIALNTGSFLFRNCQWSLDLLDAWAPMGPK 293

Query: 297 GVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFIESEFYLHGYWVGLV 356
           G IR+EAGKI+TA LKGRPAFEADDQSALIYLLL+QKD+W+DKV+IE+++YLHGYW GLV
Sbjct: 294 GTIREEAGKILTANLKGRPAFEADDQSALIYLLLSQKDQWMDKVYIENQYYLHGYWAGLV 353

Query: 357 DRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLKSMERAFNFADNQVIKL 416
           DRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLKSMERAFNFADNQV+KL
Sbjct: 354 DRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLKSMERAFNFADNQVLKL 413

Query: 417 YGFGHRGLLSPKIKRIRNDTTAPLEFVDQF--RHSVTDKS 454
           YGFGHRGLLSPKIKRIRN+T  PLE+VDQF  RHSV   S
Sbjct: 414 YGFGHRGLLSPKIKRIRNETVTPLEYVDQFDIRHSVHGSS 453

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15240848|ref|NP_196389.1| xyloglucan 6-xylosyltransferase [Arabidopsis thaliana] gi|46576342|sp|Q9LF80.1|GT3_ARATH RecName: Full=Putative glycosyltransferase 3; Short=AtGT3 gi|9716848|emb|CAC01676.1| putative golgi glycosyltransferase [Arabidopsis thaliana] gi|9759594|dbj|BAB11451.1| alpha galactosyltransferase protein [Arabidopsis thaliana] gi|34098851|gb|AAQ56808.1| At5g07720 [Arabidopsis thaliana] gi|110743797|dbj|BAE99734.1| alpha galactosyltransferase protein [Arabidopsis thaliana] gi|332003814|gb|AED91197.1| xyloglucan 6-xylosyltransferase [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|297806809\|ref\|XP_002871288.1\| galactosyl transferase GMA12/MNN10 family protein [Arabidopsis lyrata subsp. lyrata] gi\|297317125\|gb\|EFH47547.1\| galactosyl transferase GMA12/MNN10 family protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|449440814\|ref\|XP_004138179.1\| PREDICTED: putative glycosyltransferase 3-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449440812\|ref\|XP_004138178.1\| PREDICTED: putative glycosyltransferase 5-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449477203\|ref\|XP_004154959.1\| PREDICTED: putative glycosyltransferase 3-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449477207\|ref\|XP_004154960.1\| PREDICTED: putative glycosyltransferase 5-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|297839313\|ref\|XP_002887538.1\| galactosyl transferase GMA12/MNN10 family protein [Arabidopsis lyrata subsp. lyrata] gi\|297333379\|gb\|EFH63797.1\| galactosyl transferase GMA12/MNN10 family protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|225457345\|ref\|XP_002284667.1\| PREDICTED: putative glycosyltransferase 3 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356512016\|ref\|XP_003524717.1\| PREDICTED: putative glycosyltransferase 3-like [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		458
TAIR\|locus:2019090		457	XXT5 "xyloglucan xylosyltransf	0.965	0.967	0.747	3.7e-190
TAIR\|locus:2160369		457	XXT3 "xyloglucan xylosyltransf	0.962	0.964	0.738	2e-189
TAIR\|locus:2035030		513	XXT4 "xyloglucan xylosyltransf	0.722	0.645	0.779	9.2e-155
TAIR\|locus:2132293		461	XT2 "UDP-xylosyltransferase 2"	0.720	0.715	0.694	4.1e-147
TAIR\|locus:2081625		460	XT1 "xylosyltransferase 1" [Ar	0.718	0.715	0.687	2.6e-143
TAIR\|locus:2120145		432	AT4G37690 [Arabidopsis thalian	0.539	0.571	0.462	4.1e-79
TAIR\|locus:2059155		449	AT2G22900 [Arabidopsis thalian	0.541	0.552	0.444	2.2e-78
TAIR\|locus:2121798		120	AT4G38310 [Arabidopsis thalian	0.222	0.85	0.458	3.4e-21
POMBASE\|SPBC1289.13c		375	SPBC1289.13c "alpha-1,2-galact	0.170	0.208	0.311	5.7e-08
POMBASE\|SPCC736.04c		375	gma12 "alpha-1,2-galactosyltra	0.183	0.224	0.326	2.7e-06

TAIR\|locus:2019090 XXT5 "xyloglucan xylosyltransferase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1843 (653.8 bits), Expect = 3.7e-190, P = 3.7e-190
 Identities = 335/448 (74%), Positives = 380/448 (84%)

Query:     1 MGQDNFTPLKRSSTGAAAGGVLPTTNAASAANGRTGRGAM-PRGRQIQKTFNNIKITILC 59
             MGQD     KR S    +GG LPTT   +   GR GRG + PRGRQ+QKTFNNIKITILC
Sbjct:     1 MGQDGSPAHKRPS---GSGGGLPTTTLTNGG-GRGGRGGLLPRGRQMQKTFNNIKITILC 56

Query:    60 GFVTILVLRGTIGV-NFSSPDEETINQQLIEEANRVLAEIRXXXXXXXXXXXXXXXTNPN 118
             GFVTILVLRGTIGV N  S   + +NQ +IEE NR+LAEIR                NPN
Sbjct:    57 GFVTILVLRGTIGVGNLGSSSADAVNQNIIEETNRILAEIRSDSDPTDLDEPQEGDMNPN 116

Query:   119 ATYSLGPKISSWDLDRKAWLSHNAEFPSHVDGKPKILLVTGSTPKPCDNPIGDHYLLKSV 178
             ATY LGPKI+ WD  RK WL+ N EFPS V+GK +ILL+TGS PKPCDNPIGDHYLLKSV
Sbjct:   117 ATYVLGPKITDWDSQRKVWLNQNPEFPSTVNGKARILLLTGSPPKPCDNPIGDHYLLKSV 176

Query:   179 KNKIDYCRLHGIEIIYNMAHLDKELSGYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDM 238
             KNKIDYCRLHGIEI+YNMAHLDKEL+GYWAKLP++R+LMLSHPE+EWIWWMDSDA+FTD+
Sbjct:   177 KNKIDYCRLHGIEIVYNMAHLDKELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDALFTDI 236

Query:   239 VFELPMDKYKDYNLVVHGYHDLMFIQKSWIALNTGSFLFRNCQWSLDLLDAWAPYGPKGV 298
             +F++P+ +Y+ +NLV+HGY DL+F QKSWIALNTGSFL RNCQWSLDLLDAWAP GPKG 
Sbjct:   237 LFQIPLARYQKHNLVIHGYPDLLFDQKSWIALNTGSFLLRNCQWSLDLLDAWAPMGPKGP 296

Query:   299 IRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFIESEFYLHGYWVGLVDR 358
             IRDEAGK++TAYLKGRPAFEADDQSALIYLLL+QKD W++KVF+E+++YLHG+W GLVDR
Sbjct:   297 IRDEAGKVLTAYLKGRPAFEADDQSALIYLLLSQKDTWMEKVFVENQYYLHGFWEGLVDR 356

Query:   359 YEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLKSMERAFNFADNQVIKLYG 418
             YEEM+EKYHPGLGDERWPFVTHFVGCKPCGSY DY VERCLKSMERAFNFADNQV+KLYG
Sbjct:   357 YEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYADYAVERCLKSMERAFNFADNQVLKLYG 416

Query:   419 FGHRGLLSPKIKRIRNDTTAPLEFVDQF 446
             F HRGLLSPKIKRIRN+T +PLEFVD+F
Sbjct:   417 FSHRGLLSPKIKRIRNETVSPLEFVDKF 444

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0000139 "Golgi membrane" evidence=IDA

GO:0033843 "xyloglucan 6-xylosyltransferase activity" evidence=IMP

GO:0048767 "root hair elongation" evidence=RCA;IMP

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0005515 "protein binding" evidence=IPI

GO:0010411 "xyloglucan metabolic process" evidence=IMP

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR\|locus:2160369 XXT3 "xyloglucan xylosyltransferase 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2035030 XXT4 "xyloglucan xylosyltransferase 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2132293 XT2 "UDP-xylosyltransferase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2081625 XT1 "xylosyltransferase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2120145 AT4G37690 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2059155 AT2G22900 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2121798 AT4G38310 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

POMBASE\|SPBC1289.13c SPBC1289.13c "alpha-1,2-galactosyltransferase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]	Back alignment and assigned GO terms

POMBASE\|SPCC736.04c gma12 "alpha-1,2-galactosyltransferase Gma12" [Schizosaccharomyces pombe (taxid:4896)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9CA75	GT5_ARATH	2, ., 4, ., -, ., -	0.7583	0.9672	0.9693	no	no
Q9LF80	GT3_ARATH	2, ., 4, ., -, ., -	0.7595	0.9585	0.9606	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.2	0.963
3rd Layer	2.4.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		458
PLN03182		429	PLN03182, PLN03182, xyloglucan 6-xylosyltransferas	0.0
PLN03181		453	PLN03181, PLN03181, glycosyltransferase; Provision	1e-136
pfam05637		239	pfam05637, Glyco_transf_34, galactosyl transferase	2e-80

>gnl\|CDD\|215617 PLN03182, PLN03182, xyloglucan 6-xylosyltransferase; Provisional	Back alignment and domain information

 Score =  799 bits (2066), Expect = 0.0
 Identities = 298/417 (71%), Positives = 350/417 (83%), Gaps = 7/417 (1%)

Query: 37  RGAMPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNFSSPD-------EETINQQLIE 89
               PRGRQ+Q+T NN+KITILCGFVTILVLRGTI   F +P+          ++ + IE
Sbjct: 5   CLGTPRGRQLQRTLNNLKITILCGFVTILVLRGTIAGKFGTPEQDFVELRAHFLSARRIE 64

Query: 90  EANRVLAEIRSDVDPDDPDEPSDSETNPNATYSLGPKISSWDLDRKAWLSHNAEFPSHVD 149
           E +RVLAEIR D D  D DE  +   +PN  Y+LGPKIS WD  R+ WL  N  FPS V+
Sbjct: 65  EPSRVLAEIRFDDDLTDLDEVEEERWDPNTPYTLGPKISDWDEQRRRWLRKNPGFPSFVN 124

Query: 150 GKPKILLVTGSTPKPCDNPIGDHYLLKSVKNKIDYCRLHGIEIIYNMAHLDKELSGYWAK 209
           GKP++LLVTGS PKPC+NP+GDHYLLKS+KNKIDYCRLHGIEI YNMAHLD E++G+WAK
Sbjct: 125 GKPRVLLVTGSQPKPCENPVGDHYLLKSLKNKIDYCRLHGIEIFYNMAHLDAEMAGFWAK 184

Query: 210 LPLLRKLMLSHPEIEWIWWMDSDAMFTDMVFELPMDKYKDYNLVVHGYHDLMFIQKSWIA 269
           LPLLRKLML+HPE+EWIWWMDSDA+FTDM FE+P++KY+ YNLV+HG+ +L++ QKSWI 
Sbjct: 185 LPLLRKLMLAHPEVEWIWWMDSDALFTDMTFEIPLEKYEGYNLVIHGWDELVYDQKSWIG 244

Query: 270 LNTGSFLFRNCQWSLDLLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLL 329
           LNTGSFL RNCQWSLDLLDAWAP GPKG IRDEAGKI+TA LKGRPAFEADDQSAL+YLL
Sbjct: 245 LNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLL 304

Query: 330 LTQKDKWIDKVFIESEFYLHGYWVGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGS 389
           LTQ+++W DKV++E+ +YLHGYWVGLVDRYEEMMEKYHPGLGD+RWPFVTHFVGCKPCG 
Sbjct: 305 LTQRERWGDKVYLENSYYLHGYWVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVGCKPCGG 364

Query: 390 YGDYPVERCLKSMERAFNFADNQVIKLYGFGHRGLLSPKIKRIRNDTTAPLEFVDQF 446
           YGDYPVERCLK MERAFNFADNQV++LYGF H+ L S ++KR+RNDT+ PLE  D+ 
Sbjct: 365 YGDYPVERCLKQMERAFNFADNQVLELYGFRHKSLASAEVKRVRNDTSNPLEAKDEL 421

Length = 429

>gnl\|CDD\|215616 PLN03181, PLN03181, glycosyltransferase; Provisional	Back alignment and domain information

>gnl\|CDD\|203296 pfam05637, Glyco_transf_34, galactosyl transferase GMA12/MNN10 family	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		458
PLN03182		429	xyloglucan 6-xylosyltransferase; Provisional	100.0
PLN03181		453	glycosyltransferase; Provisional	100.0
KOG4748		364	consensus Subunit of Golgi mannosyltransferase com	100.0
PF05637		239	Glyco_transf_34: galactosyl transferase GMA12/MNN1	100.0
PF03314		222	DUF273: Protein of unknown function, DUF273; Inter	99.42
PF03407		212	Nucleotid_trans: Nucleotide-diphospho-sugar transf	98.47
KOG4748		364	consensus Subunit of Golgi mannosyltransferase com	98.29
PF01501		250	Glyco_transf_8: Glycosyl transferase family 8; Int	97.18
cd06914		278	GT8_GNT1 GNT1 is a fungal enzyme that belongs to t	96.97
cd02537		240	GT8_Glycogenin Glycogenin belongs the GT 8 family	96.89
cd04194		248	GT8_A4GalT_like A4GalT_like proteins catalyze the	96.32
cd00505		246	Glyco_transf_8 Members of glycosyltransferase fami	95.61
cd06431		280	GT8_LARGE_C LARGE catalytic domain has closest hom	95.44
PLN00176		333	galactinol synthase	95.36
cd06429		257	GT8_like_1 GT8_like_1 represents a subfamily of GT	94.94
PRK15171		334	lipopolysaccharide 1,3-galactosyltransferase; Prov	94.91
cd06430		304	GT8_like_2 GT8_like_2 represents a subfamily of GT	93.81
PLN02769		629	Probable galacturonosyltransferase	89.49
COG1442		325	RfaJ Lipopolysaccharide biosynthesis proteins, LPS	88.81
PLN02829		639	Probable galacturonosyltransferase	87.58
PLN02718		603	Probable galacturonosyltransferase	84.61
PLN02910		657	polygalacturonate 4-alpha-galacturonosyltransferas	83.48
PLN02742		534	Probable galacturonosyltransferase	83.3
PLN02870		533	Probable galacturonosyltransferase	80.84

>PLN03182 xyloglucan 6-xylosyltransferase; Provisional	Back alignment and domain information

Probab=100.00  E-value=5.7e-142  Score=1084.64  Aligned_cols=414  Identities=72%  Similarity=1.308  Sum_probs=392.4

Q ss_pred             CCCchhHHHHHhhccceeehhhhHHHhhhhccccccccCCCh---HHHHHH----HHHHhhhhHHHhhhcCCCCCCCCCC
Q 012705           38 GAMPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNFSSPD---EETINQ----QLIEEANRVLAEIRSDVDPDDPDEP  110 (458)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~t~~c~~~t~~~l~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  110 (458)
                      .+.+|+|++||++||+|||||||||||||||||+..+||+++   .+++.+    ...++++|+|+|++.+.+..+....
T Consensus         6 ~~~~~~~~~~~~~~~~k~t~lc~~~tilvlrgt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (429)
T PLN03182          6 LGTPRGRQLQRTLNNLKITILCGFVTILVLRGTIAGKFGTPEQDFVELRAHFLSARRIEEPSRVLAEIRFDDDLTDLDEV   85 (429)
T ss_pred             ccchhhhhHHHHHhccchhhhhhhheeeEeccccccccCCCCcchhhhhhhhccccccccccccchhccccCcccccccc
Confidence            378999999999999999999999999999999444999988   444444    3446899999999965555554444


Q ss_pred             CCCCCCCCCCcccCCCCCChHHHHHHHHhhCCCCCCCCCCCCcEEEEEccCCCCCCCCcchHHHHHHHHHHHHHHHHcCc
Q 012705          111 SDSETNPNATYSLGPKISSWDLDRKAWLSHNAEFPSHVDGKPKILLVTGSTPKPCDNPIGDHYLLKSVKNKIDYCRLHGI  190 (458)
Q Consensus       111 ~~~~~~~~~~y~~~~~i~~wd~~r~~wl~~~p~~~~~~~g~prIvIVT~sdp~~~~~~~gd~yl~ksikNr~dYArrHGY  190 (458)
                      ..+..+|+.||||||+|+|||+||++||++||+|+++.+|+|+|||||+++|.+|+|++|++||+++++||++||++|||
T Consensus        86 ~~~~~~~~~~y~lg~~i~~wd~~R~~wl~~~p~~~~~~~g~prVviVT~sdp~~c~n~~gd~yLlks~kNK~dYAr~HGY  165 (429)
T PLN03182         86 EEERWDPNTPYTLGPKISDWDEQRRRWLRKNPGFPSFVNGKPRVLLVTGSQPKPCENPVGDHYLLKSLKNKIDYCRLHGI  165 (429)
T ss_pred             chhhcCCCCCcccCCCCCCHHHHHHHHHHhCCCCCCccCCCCCEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHHHHhCC
Confidence            34556999999999999999999999999999999998899999999999999999999999999999999999999999


Q ss_pred             cEEEeccccCccCCCccchHHHHHHHHHhCCCccEEEEEeCCceeeccCCCCCCcccCCCCeeecCCcceeeccCCCccc
Q 012705          191 EIIYNMAHLDKELSGYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDMVFELPMDKYKDYNLVVHGYHDLMFIQKSWIAL  270 (458)
Q Consensus       191 ~~~~~~a~ld~~~~~sWaKip~LR~aM~a~P~aEWIwWLDsDAlImN~~~~Lple~y~d~nlvI~g~~dlIitq~dw~GL  270 (458)
                      +++|+++.|+++++++|+|+|+||++|.+||++|||||||+|||||||+++||+++|++.|+|||||.++++.+++|+||
T Consensus       166 ~~fyn~~~ld~~~p~~WaKlpaLR~aM~~~PeaEWiWWLDsDALImNmsfelPlery~~~NlVihg~~~~l~~~kdW~GL  245 (429)
T PLN03182        166 EIFYNMAHLDAEMAGFWAKLPLLRKLMLAHPEVEWIWWMDSDALFTDMTFEIPLEKYEGYNLVIHGWDELVYDQKSWIGL  245 (429)
T ss_pred             EEEeehhhcCcCCCcchhHHHHHHHHHHHCCCceEEEEecCCceeecCCCCCCHhHcCCcCeeeccchhhheeccccCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccceeecCHHHHHHHHHhcccCCCCccchhhhhhHHHhhcCCCCCCCCchHHHHHHHHhCCccccceeeeeccchhcc
Q 012705          271 NTGSFLFRNCQWSLDLLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFIESEFYLHG  350 (458)
Q Consensus       271 NtGsFLIRNs~WS~~fLDaWa~~~P~~~~~~~~G~~l~~~l~~~~~f~~~DQsAL~~LL~~~~~~w~~kv~l~~q~~lng  350 (458)
                      |+|||||||||||++|||+|++|+|++|+|+++||+|+..|++++.|+++|||||+|||.+++++|++||++|++|||||
T Consensus       246 NtGsFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~y~l~G  325 (429)
T PLN03182        246 NTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYYLHG  325 (429)
T ss_pred             ceeeEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeecceecc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchhhhhhhHHHHhhcCCCCCCCCCCeEEEccCCccCCCCCCCcHHHHHHHhHHhhcCchhhHHhHhCcccCCCCCcccc
Q 012705          351 YWVGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLKSMERAFNFADNQVIKLYGFGHRGLLSPKIK  430 (458)
Q Consensus       351 Yw~~iv~~ye~~~~~y~~G~gD~r~dFVvHFaGC~~cg~~~~y~~~~C~~~mera~nfad~qvl~~yg~~h~~l~~~~v~  430 (458)
                      ||.+||++||+++++|+||.||+||||||||+|||||+++++|+.++|+++|||||||||||||++|||+|++|+|.+|+
T Consensus       326 yw~~iv~~yee~~~~~~~g~gd~rwPfvtHF~GckpC~~~~~y~~~~C~~~m~ra~nFaDnQvL~~yGf~H~~l~~~~v~  405 (429)
T PLN03182        326 YWVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVGCKPCGGYGDYPVERCLKQMERAFNFADNQVLELYGFRHKSLASAEVK  405 (429)
T ss_pred             ccHHHHHHHHHHHHhcCCCCCCcccceeEeeccceecCCCCCcCHHHHHHHHHHHhccchHHHHHHhCccccccCcccee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCccccccccccccc
Q 012705          431 RIRNDTTAPLEFVDQFRHSVT  451 (458)
Q Consensus       431 ~~~~~~~~pl~~~~~~~~~~~  451 (458)
                      ||||||++||++++++++.++
T Consensus       406 ~~~~~~~~pl~~~~~~~~~~~  426 (429)
T PLN03182        406 RVRNDTSNPLEAKDELGLRHP  426 (429)
T ss_pred             ehhccCCCcchhhhhhcccCC
Confidence            999999999999998887765

>PLN03181 glycosyltransferase; Provisional	Back alignment and domain information

>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif	Back alignment and domain information

>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function	Back alignment and domain information

>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases []	Back alignment and domain information

>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family	Back alignment and domain information

>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen	Back alignment and domain information

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	Back alignment and domain information

>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis	Back alignment and domain information

>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis	Back alignment and domain information

>PLN00176 galactinol synthase	Back alignment and domain information

>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional	Back alignment and domain information

>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>PLN02769 Probable galacturonosyltransferase	Back alignment and domain information

>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PLN02829 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02718 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase	Back alignment and domain information

>PLN02742 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02870 Probable galacturonosyltransferase	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		458
2p6w_A		213	VP54, putative glycosyltransferase (mannosyltransf	4e-12
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05

>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A* Length = 213	Back alignment and structure

 Score = 64.6 bits (156), Expect = 4e-12
 Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 11/140 (7%)

Query: 152 PKILLVTGSTPKPCDNPIGDHYLLKSVKNKIDYCRLHGIEIIYNMAHLDK--ELSGYWAK 209
           P I +++G  PK         Y  K+ +   +YC +HG    Y  +   +  E + ++ +
Sbjct: 6   PCITILSGHFPKETI------YARKTKELVEEYCSIHGYNFYYEESEPLETEEHALHFRR 59

Query: 210 LPLLRKLMLSHPEIEWIWWMDSDAMFTDMVFELPMDKYKDYNLVVHGYHDLMFIQKSWIA 269
             ++++     P  EW  W+DSD          P+  + D +     YH   F +  W +
Sbjct: 60  SWIIQQAAEKFPSTEWFLWLDSDVYVNPKNKNKPITSFIDLSDPNILYH--TFHEAPWGS 117

Query: 270 LNTGSFLFRNCQWSLDLLDA 289
               + + +        ++ 
Sbjct: 118 YPINTGV-KFVHKDALEIEK 136

PyMOL of 2p6w

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		458
2p6w_A		213	VP54, putative glycosyltransferase (mannosyltransf	100.0
1g9r_A		311	Glycosyl transferase; alpha-beta structure; HET: U	96.22
1ll2_A		333	Glycogenin-1; protein-substrate complex, beta-alph	95.47
3u2u_A		263	Glycogenin-1, GN-1, GN1; structural genomics, stru	94.98
3tzt_A		276	Glycosyl transferase family 8; structural genomics	94.71

>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*	Back alignment and structure

Probab=100.00  E-value=1.2e-42  Score=325.18  Aligned_cols=184  Identities=22%  Similarity=0.459  Sum_probs=147.7

Q ss_pred             CCCcEEEEEccCCCCCCCCcchHHHHHHHHHHHHHHHHcCccEEEecccc-Cc-cCCCccchHHHHHHHHHhCCCccEEE
Q 012705          150 GKPKILLVTGSTPKPCDNPIGDHYLLKSVKNKIDYCRLHGIEIIYNMAHL-DK-ELSGYWAKLPLLRKLMLSHPEIEWIW  227 (458)
Q Consensus       150 g~prIvIVT~sdp~~~~~~~gd~yl~ksikNr~dYArrHGY~~~~~~a~l-d~-~~~~sWaKip~LR~aM~a~P~aEWIw  227 (458)
                      .+|||+||||++|.+|      +|++++++||++||++|||+++|+...+ +. ++.+.|.|.++||+||.+||++||||
T Consensus         4 ~~p~IllvtGs~p~ew------~yl~ksiKNK~DYArrHGYelfy~d~~l~k~~e~a~eW~ksW~IR~AM~khPeAEWfW   77 (213)
T 2p6w_A            4 TTPCITILSGHFPKET------IYARKTKELVEEYCSIHGYNFYYEESEPLETEEHALHFRRSWIIQQAAEKFPSTEWFL   77 (213)
T ss_dssp             --CCEEEEEECSCTTC------HHHHHHHHHHHHHHHHHTCEEEEECSCCSCCSHHHHHHTHHHHHHHHHHHCTTCSEEE
T ss_pred             CCceEEEEeCCCCCCc------HHHHHHHHHHHHHHHHcCCeEEEeecccccchhhcccchhhHHHHHHHHHCCCceEEE
Confidence            4799999999999986      8999999999999999999999975443 32 36677999999999999999999999


Q ss_pred             EEeCCceeeccCCCCCCccc---CCCCeeecCCcceeeccCCCcccccccce-------eecCHHHHHHHHHhcccCCCC
Q 012705          228 WMDSDAMFTDMVFELPMDKY---KDYNLVVHGYHDLMFIQKSWIALNTGSFL-------FRNCQWSLDLLDAWAPYGPKG  297 (458)
Q Consensus       228 WLDsDAlImN~~~~Lple~y---~d~nlvI~g~~dlIitq~dw~GLNtGsFL-------IRNs~WS~~fLDaWa~~~P~~  297 (458)
                      |||+||+||||++++|+++|   ++.|+++|||.++++.+   .|||+||||       |||||||++|||+|++| |  
T Consensus        78 WLDsDAlIMDmnf~lPLe~yldl~~~NlvvHGw~e~~~~~---~~lNtGvfL~~~~~~~irncqWSld~~~~w~~~-~--  151 (213)
T 2p6w_A           78 WLDSDVYVNPKNKNKPITSFIDLSDPNILYHTFHEAPWGS---YPINTGVKFVHKDALEIEKIVWSLRNEAPWNTF-P--  151 (213)
T ss_dssp             EECTTEEECGGGTTSCGGGTCCCCCTTCCEEEECCTTTSS---SSCCTTEEEEEGGGHHHHHHHHHTTTSTTTTST-T--
T ss_pred             EecCCceeecCCCCCcHHHccccccCceeecccccccccc---ccccceeeeecccchhhhhceeehhhhhcccCC-C--
Confidence            99999999999999999999   99999999998887654   499999999       99999999999999986 4  


Q ss_pred             ccchhhhhhHHHhhcCCCCCCCCchHHH-HHHHHhCCccccceeeeeccchhcccchhhhhhhHHHHhhcCCCCCCCCCC
Q 012705          298 VIRDEAGKIMTAYLKGRPAFEADDQSAL-IYLLLTQKDKWIDKVFIESEFYLHGYWVGLVDRYEEMMEKYHPGLGDERWP  376 (458)
Q Consensus       298 ~~~~~~G~~l~~~l~~~~~f~~~DQsAL-~~LL~~~~~~w~~kv~l~~q~~lngYw~~iv~~ye~~~~~y~~G~gD~r~d  376 (458)
                                            .||... +|+.-    +.-.+-.+-.+|.+|+--    ..|-+..          .-.
T Consensus       152 ----------------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~----~~~~~~~----------~~~  191 (213)
T 2p6w_A          152 ----------------------YEQKTVYEYVFP----RIPGRYIVHDPYTLNCIV----KAYPEHV----------KDA  191 (213)
T ss_dssp             ----------------------THHHHHHHTHHH----HSTTSEEEECCTTTSEET----TTCTTTG----------GGC
T ss_pred             ----------------------cccceeeeeecc----CCCcceEecCcceeeeeh----hhchhhh----------hhh
Confidence                                  345443 45543    344555555678888652    2222211          113


Q ss_pred             eEEEccCCc
Q 012705          377 FVTHFVGCK  385 (458)
Q Consensus       377 FVvHFaGC~  385 (458)
                      +.||++|..
T Consensus       192 ~~~~~~~~~  200 (213)
T 2p6w_A          192 LFVHMCGTS  200 (213)
T ss_dssp             SEEECTTCC
T ss_pred             hhhhhccCc
Confidence            889997765

PyMOL of 2p6w

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*	Back alignment and structure

>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*	Back alignment and structure

>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A	Back alignment and structure

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		458
d1ga8a_		282	Galactosyltransferase LgtC {Neisseria meningitidis	97.24
d1ll2a_		263	Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId:	96.85

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=97.24  E-value=0.0012  Score=60.75  Aligned_cols=57  Identities=12%  Similarity=0.089  Sum_probs=34.0

Q ss_pred             HHHHHHcCccEEE-ec--cccC--ccCCCccchHHHHHHHHHh-CCCccEEEEEeCCceeecc
Q 012705          182 IDYCRLHGIEIIY-NM--AHLD--KELSGYWAKLPLLRKLMLS-HPEIEWIWWMDSDAMFTDM  238 (458)
Q Consensus       182 ~dYArrHGY~~~~-~~--a~ld--~~~~~sWaKip~LR~aM~a-~P~aEWIwWLDsDAlImN~  238 (458)
                      ..+...++..+.+ ..  ..+.  +.....|++..+.|-.+.. .|+.+-|.|||+|++|...
T Consensus        49 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~l~~~lp~~~kiiyLD~D~iv~~d  111 (282)
T d1ga8a_          49 AANLRGGGGNIRFIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDS  111 (282)
T ss_dssp             HHTSGGGTTTEEEEECCGGGGTTSCCCCTTCCGGGGGGGGHHHHCCSCSCEEEECSSEEECSC
T ss_pred             HHHHHHcCCeEEEEECCchHhccccccccccCHHHHHHHHHhhhCCccceEEEecCCEEEecc
Confidence            3445667777764 22  1111  1123345555554433332 4889999999999999863

PyMOL of d1ga8a_

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure