Citrus Sinensis ID: 012767
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 456 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SU58 | 960 | ATPase 4, plasma membrane | yes | no | 0.739 | 0.351 | 0.836 | 1e-166 | |
| P23980 | 704 | Plasma membrane ATPase 2 | N/A | no | 0.688 | 0.446 | 0.827 | 1e-166 | |
| Q9LV11 | 956 | ATPase 11, plasma membran | no | no | 0.739 | 0.352 | 0.827 | 1e-165 | |
| Q08435 | 957 | Plasma membrane ATPase 1 | N/A | no | 0.692 | 0.330 | 0.830 | 1e-165 | |
| Q08436 | 956 | Plasma membrane ATPase 3 | N/A | no | 0.739 | 0.352 | 0.833 | 1e-164 | |
| P22180 | 956 | Plasma membrane ATPase 1 | N/A | no | 0.739 | 0.352 | 0.821 | 1e-164 | |
| Q7XPY2 | 951 | Plasma membrane ATPase OS | no | no | 0.785 | 0.376 | 0.713 | 1e-153 | |
| Q9SJB3 | 949 | ATPase 5, plasma membrane | no | no | 0.736 | 0.354 | 0.765 | 1e-152 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 0.682 | 0.327 | 0.762 | 1e-151 | |
| P20431 | 949 | ATPase 3, plasma membrane | no | no | 0.690 | 0.331 | 0.738 | 1e-149 |
| >sp|Q9SU58|PMA4_ARATH ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 586 bits (1511), Expect = e-166, Method: Compositional matrix adjust.
Identities = 282/337 (83%), Positives = 312/337 (92%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAARAS++EN D
Sbjct: 322 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAARASRLENQDA 381
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDAAIVGMLADPK+ARA IQEVHFLPF+PT KRTALTYID+EG HRV+KG+PEQILNL
Sbjct: 382 IDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSKGAPEQILNLA 441
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
HNKS+I R+V+AVI+KFAERGLRSLAVAYQ+VPEG K+S+G PWQF+GL+PLFDPP HDS
Sbjct: 442 HNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLMPLFDPPRHDS 501
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESIVALPVDE
Sbjct: 502 AETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDE 561
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAAR
Sbjct: 562 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 621
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
SA+DIVLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 622 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 658
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|P23980|PMA2_SOLLC Plasma membrane ATPase 2 (Fragment) OS=Solanum lycopersicum GN=LHA2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 583 bits (1503), Expect = e-166, Method: Compositional matrix adjust.
Identities = 279/337 (82%), Positives = 306/337 (90%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDKNL+E+FA GVDADTVVLMAARAS+ EN D
Sbjct: 66 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDADTVVLMAARASRTENQDA 125
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
ID AIVGMLADPKEARA I+E+HFLPF+PT KRTALTY+D EGKMHRV+KG+PEQILNL
Sbjct: 126 IDTAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVSKGAPEQILNLA 185
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
HNKS I R+V+ VI+KFAERGLRSL VAYQEVPEG KESSG PWQFIGL+PLFDPP HDS
Sbjct: 186 HNKSDIERRVHTVIDKFAERGLRSLGVAYQEVPEGRKESSGGPWQFIGLLPLFDPPRHDS 245
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI +LP+DE
Sbjct: 246 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESIASLPIDE 305
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAV DATDAAR
Sbjct: 306 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAAR 365
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
SA+DIVLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 366 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 402
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 583 bits (1502), Expect = e-165, Method: Compositional matrix adjust.
Identities = 279/337 (82%), Positives = 313/337 (92%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAA+AS++EN D
Sbjct: 318 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDA 377
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDAAIVGMLADPKEARA ++EVHFLPF+PT KRTALTYIDS+GKMHRV+KG+PEQILNL
Sbjct: 378 IDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLA 437
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
HN+++I R+V+AVI+KFAERGLRSLAVAYQEVPEG+KES+G PWQF+GL+PLFDPP HDS
Sbjct: 438 HNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDPPRHDS 497
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+D+
Sbjct: 498 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPIDD 557
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAAR
Sbjct: 558 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
SA+DIVLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q08435|PMA1_NICPL Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 581 bits (1498), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/337 (83%), Positives = 307/337 (91%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDKNLIE+FA GVDAD VVLMAARAS+ EN D
Sbjct: 319 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADMVVLMAARASRTENQDA 378
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDAAIVGMLADPKEARA I+E+HFLPF+PT KRTALTY+D EGKMHRV+KG+PEQILNL
Sbjct: 379 IDAAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVSKGAPEQILNLA 438
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
HNKS I R+V+AVI+KFAERGLRSL VAYQEVPEG KES+G PWQFIGL+PLFDPP HDS
Sbjct: 439 HNKSDIERRVHAVIDKFAERGLRSLGVAYQEVPEGRKESAGGPWQFIGLLPLFDPPRHDS 498
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKM+TGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+DE
Sbjct: 499 AETIRRALNLGVNVKMVTGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESISALPIDE 558
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAV DATDAAR
Sbjct: 559 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAAR 618
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
SA+DIVLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 619 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 655
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q08436|PMA3_NICPL Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 579 bits (1493), Expect = e-164, Method: Compositional matrix adjust.
Identities = 281/337 (83%), Positives = 307/337 (91%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDK LIE+FA GVDADTVVLMAARAS+ EN D
Sbjct: 318 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKYLIEVFARGVDADTVVLMAARASRTENQDA 377
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDAAIVGMLADPKEARA I+E+HFLPF+PT KRTALTY+D EGKMHRV+KG+PEQIL+L
Sbjct: 378 IDAAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVSKGAPEQILHLA 437
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
HNKS I R+V+AVI+KFAERGLRSLAVAYQEVPEG KES+G PWQFI L+PLFDPP HDS
Sbjct: 438 HNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFIALLPLFDPPRHDS 497
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALPVDE
Sbjct: 498 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESISALPVDE 557
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAV DATDAAR
Sbjct: 558 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAAR 617
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
SA+DIVLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P22180|PMA1_SOLLC Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 577 bits (1488), Expect = e-164, Method: Compositional matrix adjust.
Identities = 277/337 (82%), Positives = 305/337 (90%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDK LIE+FA G+DADTVVLMAARAS++EN D
Sbjct: 318 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKALIEVFAKGIDADTVVLMAARASRIENQDA 377
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
ID AIVGMLADPKEARA I+E+HFLPF+PT KRTALTY+D EGKMHRV+KG+PEQILNL
Sbjct: 378 IDTAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVSKGAPEQILNLA 437
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
HNKS I R+V+ VI+KFAERGLRSL VAYQEVPEG KES+G PWQFI L+PLFDPP HDS
Sbjct: 438 HNKSDIERRVHTVIDKFAERGLRSLGVAYQEVPEGRKESAGGPWQFIALLPLFDPPRHDS 497
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+DE
Sbjct: 498 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESIAALPIDE 557
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAV DATDAAR
Sbjct: 558 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAAR 617
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
SA+DIVLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 542 bits (1396), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/374 (71%), Positives = 305/374 (81%), Gaps = 16/374 (4%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKL+VDKNL+E+F GVD D V+L+AARAS+ EN D
Sbjct: 314 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDKDHVLLLAARASRTENQDA 373
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDAA+VGMLADPKEARA I+EVHFLPF+P KRTALTYID++G HR +KG+PEQIL L
Sbjct: 374 IDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWHRASKGAPEQILTLC 433
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
+ K + RKV+AVI+K+AERGLRSLAVA QEVPE SKES+G PWQF+GL+PLFDPP HDS
Sbjct: 434 NCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGGPWQFVGLLPLFDPPRHDS 493
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIR+AL LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++D S+ ALPVDE
Sbjct: 494 AETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDASLEALPVDE 553
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQ + HI GM G+GVNDAPALKKADIGIAVADATDAAR
Sbjct: 554 LIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIAVADATDAAR 613
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTV 360
SA+DIVLTEPGL+VII+AVL SR IFQRM+NY + + T+ V
Sbjct: 614 SASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVS----------------ITIRIV 657
Query: 361 IAILQTAFTSKKDF 374
+ L A K DF
Sbjct: 658 LGFLLIALIWKYDF 671
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 538 bits (1387), Expect = e-152, Method: Compositional matrix adjust.
Identities = 258/337 (76%), Positives = 292/337 (86%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLCCDKTGTLTLNKLTVDKNL+E+FA GV + V L+AARAS++EN D
Sbjct: 314 MTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAARASRIENQDA 373
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDAAIVGMLADPKEARA ++EVHF PF+P KRTALTY+DS+G HR +KG+PEQILNL
Sbjct: 374 IDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASKGAPEQILNLC 433
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
+ K + RKV+ VI+KFAERGLRSLAVA QEV E K++ G PWQ +GL+PLFDPP HDS
Sbjct: 434 NCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLLPLFDPPRHDS 493
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +D S+ ALPVDE
Sbjct: 494 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKDSSLGALPVDE 553
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIV LQ RNHICGM G+GVNDAPALKKADIGIAV DATDAAR
Sbjct: 554 LIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGIAVVDATDAAR 613
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
A+DIVLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 614 GASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 650
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 533 bits (1374), Expect = e-151, Method: Compositional matrix adjust.
Identities = 257/337 (76%), Positives = 294/337 (87%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI ++AGMDVLC DKTGTLTLNKL+VDKNL+E+FA GVD + V+L+AARAS+VEN D
Sbjct: 314 MTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHVLLLAARASRVENQDA 373
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDA +VGMLADPKEARA I+EVHFLPF+PT KRTALTYID+EG HR +KG+PEQI+ L
Sbjct: 374 IDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRASKGAPEQIITLC 433
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
+ K + RKV++VI K+AERGLRSLAVA QEVPE SK+S G PWQFIGL+PLFDPP HDS
Sbjct: 434 NCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSPGGPWQFIGLLPLFDPPRHDS 493
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIR+AL LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +D S+ +LPVDE
Sbjct: 494 AETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQSKDGSLESLPVDE 553
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQ + HI GM G+GVNDAPALKKADIGIAV DATDAAR
Sbjct: 554 LIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIAVDDATDAAR 613
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
SA+DIVLTEPGL+VII+AVL SR IFQRM+NY + +
Sbjct: 614 SASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAV 650
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20431|PMA3_ARATH ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 528 bits (1361), Expect = e-149, Method: Compositional matrix adjust.
Identities = 249/337 (73%), Positives = 298/337 (88%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKL+VDKNLIE++ GV+ D V+L AARAS+VEN D
Sbjct: 315 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLLFAARASRVENQDA 374
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDAA+VGMLADPKEARA I+E+HFLPF+P KRTALT+IDS G HRV+KG+PEQIL+L
Sbjct: 375 IDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHRVSKGAPEQILDLC 434
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
+ ++ + ++V++ I+K+AERGLRSLAV+ Q VPE +KESSGSPW+F+G++PLFDPP HDS
Sbjct: 435 NARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFVGVLPLFDPPRHDS 494
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL LG+ VKMITGDQLAIAKETGRRLGMG+NMYPSS+L G+ +DE++ +PV++
Sbjct: 495 AETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGKHKDEAMAHIPVED 554
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQ R HICGM G+GVNDAPALKKADIGIAVADATDAAR
Sbjct: 555 LIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 614
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
A+DIVLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 615 GASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 651
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 456 | ||||||
| 449440750 | 959 | PREDICTED: ATPase 4, plasma membrane-typ | 0.739 | 0.351 | 0.845 | 1e-166 | |
| 224121558 | 966 | autoinhibited H+ ATPase [Populus trichoc | 0.688 | 0.325 | 0.845 | 1e-166 | |
| 449528800 | 959 | PREDICTED: LOW QUALITY PROTEIN: ATPase 4 | 0.739 | 0.351 | 0.842 | 1e-166 | |
| 31580855 | 956 | plasma membrane H+-ATPase [Sesbania rost | 0.739 | 0.352 | 0.839 | 1e-165 | |
| 225456641 | 956 | PREDICTED: ATPase 11, plasma membrane-ty | 0.817 | 0.390 | 0.776 | 1e-165 | |
| 6759599 | 956 | plasma membrane H+ ATPase [Prunus persic | 0.688 | 0.328 | 0.836 | 1e-165 | |
| 30692952 | 960 | H(+)-ATPase 4 [Arabidopsis thaliana] gi| | 0.739 | 0.351 | 0.836 | 1e-165 | |
| 312282347 | 956 | unnamed protein product [Thellungiella h | 0.739 | 0.352 | 0.827 | 1e-164 | |
| 33943131 | 956 | plasma membrane H+-ATPase [Juglans regia | 0.817 | 0.390 | 0.771 | 1e-164 | |
| 224135653 | 967 | autoinhibited H+ ATPase [Populus trichoc | 0.739 | 0.348 | 0.843 | 1e-164 |
| >gi|449440750|ref|XP_004138147.1| PREDICTED: ATPase 4, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 285/337 (84%), Positives = 310/337 (91%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDKNL+E+FA GVD DTVVLMAARAS+ EN D
Sbjct: 321 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDVDTVVLMAARASRTENQDA 380
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
ID AIVGMLADPKEARA IQEVHFLPF+PT KRTALTYID EGKMHRV+KG+PEQILNL
Sbjct: 381 IDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDHEGKMHRVSKGAPEQILNLA 440
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
HNKS+I RKV+AVI+KFAERGLRSLAVAYQEVP+G KES+G PWQF+GL+PLFDPP HDS
Sbjct: 441 HNKSEIERKVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFVGLLPLFDPPRHDS 500
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESI ALPVDE
Sbjct: 501 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPVDE 560
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAAR
Sbjct: 561 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 620
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
SA+DIVLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 621 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 657
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121558|ref|XP_002318614.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222859287|gb|EEE96834.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 285/337 (84%), Positives = 310/337 (91%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDKNLIE+FA GVDAD VVLMAARAS++EN D
Sbjct: 328 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADAVVLMAARASRIENQDA 387
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
ID AIVGMLADPKEARA IQEVHFLPF+PT KRTALTYIDS GKMHRV+KG+PEQILNL
Sbjct: 388 IDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDSGGKMHRVSKGAPEQILNLS 447
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
HNKS I R+V+AVI+KFAERGLRSLAVAYQEVPEG KES+G PWQFIGL+PLFDPP HDS
Sbjct: 448 HNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFIGLLPLFDPPRHDS 507
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESI ALP+DE
Sbjct: 508 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIAALPIDE 567
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAAR
Sbjct: 568 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 627
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
SA+DIVLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 628 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 664
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449528800|ref|XP_004171391.1| PREDICTED: LOW QUALITY PROTEIN: ATPase 4, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 284/337 (84%), Positives = 310/337 (91%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDKNL+E+FA GVD DTVVLMAARAS+ EN D
Sbjct: 321 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDVDTVVLMAARASRTENQDA 380
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
ID AIVGMLADPKEARA IQEVHFLPF+PT KRTALTYID EGKMHRV+KG+PEQILNL
Sbjct: 381 IDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDHEGKMHRVSKGAPEQILNLA 440
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
HNKS+I RKV+AVI+KFAERGLRSLAVAYQEVP+G KES+G PWQF+GL+PLFDPP H+S
Sbjct: 441 HNKSEIERKVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFVGLLPLFDPPRHES 500
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESI ALPVDE
Sbjct: 501 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPVDE 560
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAAR
Sbjct: 561 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 620
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
SA+DIVLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 621 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 657
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|31580855|dbj|BAC77532.1| plasma membrane H+-ATPase [Sesbania rostrata] | Back alignment and taxonomy information |
|---|
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 283/337 (83%), Positives = 311/337 (92%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDKNL+E+FA GVDADTVVLMAARAS++EN D
Sbjct: 318 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDADTVVLMAARASRLENQDA 377
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
ID AIVGMLADPKEARA IQEVHFLPF+PT KRTALTYID +GKMHRV+KG+PEQILNL
Sbjct: 378 IDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDQDGKMHRVSKGAPEQILNLA 437
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
HNK+ I R+V+AVI+KFAERGLRSLAVAYQEVP+G KES+G PWQFIGL+PLFDPP HDS
Sbjct: 438 HNKTDIERRVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFIGLMPLFDPPRHDS 497
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESI ALP+DE
Sbjct: 498 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDE 557
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAAR
Sbjct: 558 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
SA+DIVLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
Source: Sesbania rostrata Species: Sesbania rostrata Genus: Sesbania Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225456641|ref|XP_002270344.1| PREDICTED: ATPase 11, plasma membrane-type [Vitis vinifera] gi|297734039|emb|CBI15286.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 295/380 (77%), Positives = 326/380 (85%), Gaps = 7/380 (1%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDKNLIE+FA GVD DTVVLMAARAS++EN D
Sbjct: 318 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDPDTVVLMAARASRIENQDA 377
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
ID AIVGMLADPKEARA IQEVHFLPF+PT KRTALTYIDSEGKMHRV+KG+PEQILNL
Sbjct: 378 IDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLA 437
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
NKS+I R+V+AVI+KFAERGLRSLAVAYQEVP+G KES+G PWQFIGL+PLFDPP HDS
Sbjct: 438 RNKSEIERRVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFIGLMPLFDPPRHDS 497
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESI ALP+DE
Sbjct: 498 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIAALPIDE 557
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAAR
Sbjct: 558 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGID-----GLSSTEFIQVLELNFLF 355
SA+DIVLTEPGL+VII+AVL SRAIFQRM+NY + + L + E +F
Sbjct: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWEFDFPP 677
Query: 356 TLDTVIAILQ--TAFTSKKD 373
+ +IAIL T T KD
Sbjct: 678 FMVLIIAILNDGTIMTISKD 697
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6759599|emb|CAB69824.1| plasma membrane H+ ATPase [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 282/337 (83%), Positives = 310/337 (91%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDKNLIE+FA G+D DTVVLMAARAS+VEN D
Sbjct: 318 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGMDPDTVVLMAARASRVENQDA 377
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
ID AIVGMLADPKEARA +QE+HFLPF+PT KRTALTY+D +GKMHRV+KG+PEQILNL
Sbjct: 378 IDTAIVGMLADPKEARAGVQELHFLPFNPTDKRTALTYLDRDGKMHRVSKGAPEQILNLA 437
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
HNKS I R+V+AVI+KFAERGLRSLAVAYQEVPEG KES+G PWQF+GL+PLFDPP HDS
Sbjct: 438 HNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFVGLMPLFDPPRHDS 497
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESIVALP+DE
Sbjct: 498 AETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIVALPIDE 557
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAAR
Sbjct: 558 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
SA+DIVLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30692952|ref|NP_190378.2| H(+)-ATPase 4 [Arabidopsis thaliana] gi|83305346|sp|Q9SU58.2|PMA4_ARATH RecName: Full=ATPase 4, plasma membrane-type; AltName: Full=Proton pump 4 gi|26451228|dbj|BAC42716.1| putative H+-transporting ATPase [Arabidopsis thaliana] gi|332644829|gb|AEE78350.1| H(+)-ATPase 4 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 282/337 (83%), Positives = 312/337 (92%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAARAS++EN D
Sbjct: 322 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAARASRLENQDA 381
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDAAIVGMLADPK+ARA IQEVHFLPF+PT KRTALTYID+EG HRV+KG+PEQILNL
Sbjct: 382 IDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSKGAPEQILNLA 441
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
HNKS+I R+V+AVI+KFAERGLRSLAVAYQ+VPEG K+S+G PWQF+GL+PLFDPP HDS
Sbjct: 442 HNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLMPLFDPPRHDS 501
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESIVALPVDE
Sbjct: 502 AETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDE 561
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAAR
Sbjct: 562 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 621
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
SA+DIVLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 622 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 658
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|312282347|dbj|BAJ34039.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
|---|
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 279/337 (82%), Positives = 313/337 (92%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAA+AS++EN D
Sbjct: 318 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDA 377
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDAAIVGMLADPKEARA ++E+HFLPF+PT KRTALTYIDS+GKMHRV+KG+PEQILNL
Sbjct: 378 IDAAIVGMLADPKEARAGVREIHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLA 437
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
HNKS+I R+V+ VI+KFAERGLRSLAVAYQEVPEG+KES+G PWQF+GL+PLFDPP HDS
Sbjct: 438 HNKSEIERRVHTVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFVGLMPLFDPPRHDS 497
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESI ALP+D+
Sbjct: 498 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIGALPIDD 557
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAAR
Sbjct: 558 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
SA+DIVLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
Source: Thellungiella halophila Species: Eutrema halophilum Genus: Eutrema Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|33943131|gb|AAQ55291.1| plasma membrane H+-ATPase [Juglans regia] | Back alignment and taxonomy information |
|---|
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 293/380 (77%), Positives = 324/380 (85%), Gaps = 7/380 (1%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKL+VDK LIE+F GVDAD VVLMAARAS+VEN D
Sbjct: 318 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKALIEVFTKGVDADAVVLMAARASRVENQDA 377
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
ID+AIVGMLADPKEARA IQEVHFLPF+PT KRTALTYID +GKMHRV+KG+PEQILNL
Sbjct: 378 IDSAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDRDGKMHRVSKGAPEQILNLA 437
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
HNKS I R+V+AVI+KFAERGLRSLAVAYQEVPEG KES+G PWQFIGL+PLFDPP HDS
Sbjct: 438 HNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFIGLMPLFDPPRHDS 497
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESI ALP+DE
Sbjct: 498 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIAALPIDE 557
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAAR
Sbjct: 558 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGID-----GLSSTEFIQVLELNFLF 355
SA+DIVLTEPGL+VII+AVL SRAIFQRM+NY + + L + E +F
Sbjct: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWEFDFPP 677
Query: 356 TLDTVIAILQ--TAFTSKKD 373
+ +IAIL T T KD
Sbjct: 678 FMVLIIAILNDGTIMTISKD 697
|
Source: Juglans regia Species: Juglans regia Genus: Juglans Family: Juglandaceae Order: Fagales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224135653|ref|XP_002322127.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222869123|gb|EEF06254.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 285/338 (84%), Positives = 311/338 (92%), Gaps = 1/338 (0%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEI-FAGGVDADTVVLMAARASQVENLD 59
M+AI +MAGMDVLC DKTGTLTLNKLTVDKNLIE+ FA GVDADTVVLMAA+AS++EN D
Sbjct: 328 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVVFAKGVDADTVVLMAAQASRIENQD 387
Query: 60 VIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNL 119
ID AIVGMLADPKEARA IQEVHFLPF+PT KRTALTYIDS G MHRV+KG+PEQILNL
Sbjct: 388 AIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDSGGIMHRVSKGAPEQILNL 447
Query: 120 LHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHD 179
HNKS I R+V+AVI+KFAERGLRSLAVAYQ+VPEG KES+G PWQFIGL+PLFDPP HD
Sbjct: 448 AHNKSDIERRVHAVIDKFAERGLRSLAVAYQKVPEGRKESAGGPWQFIGLMPLFDPPRHD 507
Query: 180 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 239
SAETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESIVALP+D
Sbjct: 508 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIVALPID 567
Query: 240 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAA 299
ELIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAA
Sbjct: 568 ELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAA 627
Query: 300 RSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
RSA+DIVLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 628 RSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 665
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 456 | ||||||
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.815 | 0.387 | 0.716 | 7.3e-165 | |
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 0.815 | 0.389 | 0.708 | 3.1e-164 | |
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.817 | 0.393 | 0.663 | 1.4e-150 | |
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.817 | 0.393 | 0.647 | 3e-144 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.739 | 0.355 | 0.685 | 1.3e-143 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 0.817 | 0.390 | 0.615 | 2.1e-143 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.817 | 0.393 | 0.636 | 1.8e-142 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.815 | 0.391 | 0.621 | 5.6e-141 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.811 | 0.385 | 0.631 | 7.6e-133 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.815 | 0.392 | 0.639 | 4.8e-129 |
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1346 (478.9 bits), Expect = 7.3e-165, Sum P(2) = 7.3e-165
Identities = 273/381 (71%), Positives = 309/381 (81%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAARAS++EN D
Sbjct: 322 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAARASRLENQDA 381
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDAAIVGMLADPK+ARA IQEVHFLPF+PT KRTALTYID+EG HRV+KG+PEQILNL
Sbjct: 382 IDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSKGAPEQILNLA 441
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
HNKS+I R+V+AVI+KFAERGLRSLAVAYQ+VPEG K+S+G PWQF+GL+PLFDPP HDS
Sbjct: 442 HNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLMPLFDPPRHDS 501
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESIVALPVDE
Sbjct: 502 AETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDE 561
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXX 300
LIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKK
Sbjct: 562 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 621
Query: 301 XXXXXVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLD-- 358
VLTEPGL+VII+AVL SRAIFQRM+NY + + ++ + + L ++ D
Sbjct: 622 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS-ITIRIVLGFMLLALIWQFDFP 680
Query: 359 ----TVIAILQ--TAFTSKKD 373
+IAIL T T KD
Sbjct: 681 PFMVLIIAILNDGTIMTISKD 701
|
|
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1339 (476.4 bits), Expect = 3.1e-164, Sum P(2) = 3.1e-164
Identities = 270/381 (70%), Positives = 310/381 (81%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAA+AS++EN D
Sbjct: 318 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDA 377
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDAAIVGMLADPKEARA ++EVHFLPF+PT KRTALTYIDS+GKMHRV+KG+PEQILNL
Sbjct: 378 IDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLA 437
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
HN+++I R+V+AVI+KFAERGLRSLAVAYQEVPEG+KES+G PWQF+GL+PLFDPP HDS
Sbjct: 438 HNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDPPRHDS 497
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+D+
Sbjct: 498 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPIDD 557
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXX 300
LIEKADGFAGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKK
Sbjct: 558 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617
Query: 301 XXXXXVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLD-- 358
VLTEPGL+VII+AVL SRAIFQRM+NY + + ++ + + L ++ D
Sbjct: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS-ITIRIVLGFMLLALIWKFDFP 676
Query: 359 ----TVIAILQ--TAFTSKKD 373
+IAIL T T KD
Sbjct: 677 PFMVLIIAILNDGTIMTISKD 697
|
|
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1236 (440.2 bits), Expect = 1.4e-150, Sum P(2) = 1.4e-150
Identities = 252/380 (66%), Positives = 292/380 (76%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLCCDKTGTLTLNKLTVDKNL+E+FA GV + V L+AARAS++EN D
Sbjct: 314 MTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAARASRIENQDA 373
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDAAIVGMLADPKEARA ++EVHF PF+P KRTALTY+DS+G HR +KG+PEQILNL
Sbjct: 374 IDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASKGAPEQILNLC 433
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
+ K + RKV+ VI+KFAERGLRSLAVA QEV E K++ G PWQ +GL+PLFDPP HDS
Sbjct: 434 NCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLLPLFDPPRHDS 493
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +D S+ ALPVDE
Sbjct: 494 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKDSSLGALPVDE 553
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXX 300
LIEKADGFAGVFPEHKYEIV LQ RNHICGM G+GVNDAPALKK
Sbjct: 554 LIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGIAVVDATDAAR 613
Query: 301 XXXXXVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDG----LSSTEFIQVL-ELNFLF 355
VLTEPGL+VII+AVL SRAIFQRM+NY + + + FI ++ + +F
Sbjct: 614 GASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWQFDFSP 673
Query: 356 TLDTVIAILQ--TAFTSKKD 373
+ +IAIL T T KD
Sbjct: 674 FMVLIIAILNDGTIMTISKD 693
|
|
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1204 (428.9 bits), Expect = 3.0e-144, Sum P(2) = 3.0e-144
Identities = 246/380 (64%), Positives = 291/380 (76%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKL+VDKNL+E+F GV+ D V+L AA AS+VEN D
Sbjct: 314 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDA 373
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDAA+VGMLADPKEARA I+EVHFLPF+P KRTALTYIDS+G HRV+KG+PEQIL+L
Sbjct: 374 IDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSKGAPEQILDLA 433
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
+ + + +KV + I+K+AERGLRSLAVA Q VPE +KES G PW+F+GL+PLFDPP HDS
Sbjct: 434 NARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLLPLFDPPRHDS 493
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPS+AL G D+D +I ++PV+E
Sbjct: 494 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKDSNIASIPVEE 553
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXX 300
LIEKADGFAGVFPEHKYEIVK LQ R HI GM G+GVNDAPALKK
Sbjct: 554 LIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAAR 613
Query: 301 XXXXXVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEF----IQVL-ELNFLF 355
VLTEPGL+VII+AVL SRAIFQRM+NY + + F I ++ E +F
Sbjct: 614 GASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSA 673
Query: 356 TLDTVIAILQ--TAFTSKKD 373
+ +IAIL T T KD
Sbjct: 674 FMVLIIAILNDGTIMTISKD 693
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1189 (423.6 bits), Expect = 1.3e-143, Sum P(2) = 1.3e-143
Identities = 231/337 (68%), Positives = 269/337 (79%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKL+VDK+LIE+F +D+D+VVLMAARAS++EN D
Sbjct: 317 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMAARASRIENQDA 376
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDA+IVGML DPKEARA I EVHFLPF+P KRTA+TYID G HR +KG+PEQI+ L
Sbjct: 377 IDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSSKGAPEQIIELC 436
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
+ + + RK + VI+ FAERGLRSL VA Q VPE +KES GSPW+F+GL+PLFDPP HDS
Sbjct: 437 NLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGLLPLFDPPRHDS 496
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL LG+ VKMITGDQLAI ETGRRLGMGTNMYPS++L G +DES+V +P+DE
Sbjct: 497 AETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSKDESLVGIPIDE 556
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXX 300
LIEKADGFAGVFPEHKYEIVK LQ R HICGM G+GVNDAPALKK
Sbjct: 557 LIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 616
Query: 301 XXXXXVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
VLTEPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 617 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 653
|
|
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1164 (414.8 bits), Expect = 2.1e-143, Sum P(2) = 2.1e-143
Identities = 234/380 (61%), Positives = 278/380 (73%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDK+++E+F +D D +++ AARAS+VEN D
Sbjct: 319 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDKDQLLVNAARASRVENQDA 378
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDA IVGML DP+EAR I EVHF PF+P KRTA+TYID+ G HRV+KG+PEQI+ L
Sbjct: 379 IDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDANGNWHRVSKGAPEQIIELC 438
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
+ + ++ + +I+KFA+RGLRSLAV Q V E K S G PWQF+GL+PLFDPP HDS
Sbjct: 439 NLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGEPWQFLGLLPLFDPPRHDS 498
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESI +LPVDE
Sbjct: 499 AETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIASLPVDE 558
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXX 300
LIEKADGFAGVFPEHKYEIVK LQ HICGM G+GVNDAPALK+
Sbjct: 559 LIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALKRADIGIAVADATDAAR 618
Query: 301 XXXXXVLTEPGLNVIITAVLISRAIFQRMRNYMVRGID-GLSSTEFIQVLELNFLFTLDT 359
VLTEPGL+VI++AVL SRAIFQRM+NY + + + +L L + F
Sbjct: 619 SASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVMGFMLLALIWKFDFSP 678
Query: 360 ----VIAILQ--TAFTSKKD 373
++AIL T T KD
Sbjct: 679 FMVLIVAILNDGTIMTISKD 698
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1205 (429.2 bits), Expect = 1.8e-142, Sum P(2) = 1.8e-142
Identities = 242/380 (63%), Positives = 294/380 (77%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKL+VDKNLIE++ GV+ D V+L AARAS+VEN D
Sbjct: 315 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLLFAARASRVENQDA 374
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDAA+VGMLADPKEARA I+E+HFLPF+P KRTALT+IDS G HRV+KG+PEQIL+L
Sbjct: 375 IDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHRVSKGAPEQILDLC 434
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
+ ++ + ++V++ I+K+AERGLRSLAV+ Q VPE +KESSGSPW+F+G++PLFDPP HDS
Sbjct: 435 NARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFVGVLPLFDPPRHDS 494
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL LG+ VKMITGDQLAIAKETGRRLGMG+NMYPSS+L G+ +DE++ +PV++
Sbjct: 495 AETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGKHKDEAMAHIPVED 554
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXX 300
LIEKADGFAGVFPEHKYEIVK LQ R HICGM G+GVNDAPALKK
Sbjct: 555 LIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 614
Query: 301 XXXXXVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEF-IQVLELNFLFTLDT 359
VLTEPGL+VII+AVL SRAIFQRM+NY + + F ++ L + F
Sbjct: 615 GASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFSP 674
Query: 360 ----VIAILQ--TAFTSKKD 373
+IAIL T T KD
Sbjct: 675 FMVLIIAILNDGTIMTISKD 694
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1157 (412.3 bits), Expect = 5.6e-141, Sum P(2) = 5.6e-141
Identities = 236/380 (62%), Positives = 282/380 (74%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKLTVDKNLIE+F+ VD D V+L++ARAS+VEN D
Sbjct: 317 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILLSARASRVENQDA 376
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
ID +IV ML DPKEARA I EVHFLPF+P KRTA+TYID+ G+ HR +KG+PEQI+ L
Sbjct: 377 IDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRCSKGAPEQIIELC 436
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
K + R+ + +I+KFAERGLRSL VA Q VPE KES+G+PW+F+GL+PLFDPP HDS
Sbjct: 437 DLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVGLLPLFDPPRHDS 496
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL LG+ VKMITGDQLAI KETGRRLGMGTNMYPSS+L +++D++ +PVDE
Sbjct: 497 AETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-ENKDDTTGGVPVDE 555
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXX 300
LIEKADGFAGVFPEHKYEIV+ LQ R HI GM G+GVNDAPALKK
Sbjct: 556 LIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADIGIAVDDATDAAR 615
Query: 301 XXXXXVLTEPGLNVIITAVLISRAIFQRMRNYMVRGID-----GLSSTEFIQVLELNFLF 355
VLTEPGL+VI++AVL SRAIFQRM+NY + + L + E +F
Sbjct: 616 SASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVALIWEFDFSP 675
Query: 356 TLDTVIAILQ--TAFTSKKD 373
+ +IAIL T T KD
Sbjct: 676 FMVLIIAILNDGTIMTISKD 695
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1178 (419.7 bits), Expect = 7.6e-133, Sum P(2) = 7.6e-133
Identities = 240/380 (63%), Positives = 282/380 (74%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKL+VDKNLIE+F G+D D VLMAARA+++EN D
Sbjct: 317 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFKRGIDRDMAVLMAARAARLENQDA 376
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
ID AIV ML+DPKEARA I+E+HFLPF P +RTALTY+D EGKMHRV+KG+PE+IL++
Sbjct: 377 IDTAIVSMLSDPKEARAGIKELHFLPFSPANRRTALTYLDGEGKMHRVSKGAPEEILDMA 436
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
HNK +I KV+A I+KFAERGLRSL +AYQEVP+G + G PW F+ L+PLFDPP HDS
Sbjct: 437 HNKLEIKEKVHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPWDFVALLPLFDPPRHDS 496
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
A+TI RAL LG+ VKMITGDQLAIAKETGRRLGMGTNMYPSS+L + E + VDE
Sbjct: 497 AQTIERALHLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLSDNNTEGV---SVDE 553
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXX 300
LIE ADGFAGVFPEHKYEIVK LQ+R HICGM G+GVNDAPALKK
Sbjct: 554 LIENADGFAGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADIGIAVDDATDAAR 613
Query: 301 XXXXXVLTEPGLNVIITAVLISRAIFQRMRNYMVRGID-GLSSTEFIQVL----ELNFLF 355
VLTEPGL+VII+AVL SRAIFQRM+NY + + + +L E +F
Sbjct: 614 GASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVMGFMLLCVFWEFDFPP 673
Query: 356 TLDTVIAILQ--TAFTSKKD 373
+ VIAIL T T KD
Sbjct: 674 FMVLVIAILNDGTIMTISKD 693
|
|
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1195 (425.7 bits), Expect = 4.8e-129, Sum P(2) = 4.8e-129
Identities = 243/380 (63%), Positives = 287/380 (75%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLCCDKTGTLTLN LTVDKNLIE+F +D DT++L+A RAS++EN D
Sbjct: 322 MTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVDYMDKDTILLLAGRASRLENQDA 381
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDAAIV MLADP+EARA+I+E+HFLPF+P KRTA+TYIDS+GK +R TKG+PEQ+LNL
Sbjct: 382 IDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITYIDSDGKWYRATKGAPEQVLNLC 441
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
K++I ++V A+I++FAE+GLRSLAVAYQE+PE S S G PW+F GL+PLFDPP HDS
Sbjct: 442 QQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGGPWRFCGLLPLFDPPRHDS 501
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
ETI RALSLG+ VKMITGDQLAIAKETGRRLGMGTNMYPSS+L G + DE A+PVDE
Sbjct: 502 GETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDEH-EAIPVDE 560
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXX 300
LIE ADGFAGVFPEHKYEIVK LQ H+ GM G+GVNDAPALKK
Sbjct: 561 LIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIAVADATDAAR 620
Query: 301 XXXXXVLTEPGLNVIITAVLISRAIFQRMRNYMVRGID-----GLSSTEFIQVLELNFLF 355
VLT+PGL+VII+AVL SRAIFQRMRNY V + L T + E +F
Sbjct: 621 SSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRIVLGFTLLALIWEYDFPP 680
Query: 356 TLDTVIAILQ--TAFTSKKD 373
+ +IAIL T T KD
Sbjct: 681 FMVLIIAILNDGTIMTISKD 700
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SU58 | PMA4_ARATH | 3, ., 6, ., 3, ., 6 | 0.8367 | 0.7390 | 0.3510 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 456 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 1e-167 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 4e-80 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 2e-62 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 8e-41 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 8e-40 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 8e-40 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-34 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-33 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-33 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 2e-32 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-29 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 3e-27 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 8e-26 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 3e-23 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 3e-21 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 5e-21 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-20 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 4e-20 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 7e-19 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 8e-16 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 4e-13 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 2e-10 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 6e-09 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 8e-07 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 2e-04 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.001 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 0.002 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 0.003 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 487 bits (1257), Expect = e-167
Identities = 199/370 (53%), Positives = 251/370 (67%), Gaps = 17/370 (4%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
++AI ++AGMD+LC DKTGTLTLNKL++D+ L F G D D V+L AA AS+ E+ D
Sbjct: 277 LTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDA 334
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSE-GKMHRVTKGSPEQILNL 119
ID A++G D KEAR + + F+PFDP KRT T D E GK +VTKG+P+ IL+L
Sbjct: 335 IDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDL 394
Query: 120 LHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHD 179
NK +I KV +++ A RG R+L VA W F+GL+PLFDPP HD
Sbjct: 395 CDNKKEIEEKVEEKVDELASRGYRALGVART--------DEEGRWHFLGLLPLFDPPRHD 446
Query: 180 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 239
+ ETI RA LG+ VKM+TGD LAIAKET RRLG+GTN+Y + L D + + +
Sbjct: 447 TKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDL-PSGLG 505
Query: 240 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAA 299
E++E ADGFA VFPEHKYEIV+ LQ R H+ GM G+GVNDAPALKKAD+GIAVA ATDAA
Sbjct: 506 EMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAA 565
Query: 300 RSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDG---LSSTEFIQVLELNFLFT 356
RSAADIVLTEPGL+VI+ A+L SR IFQRM++Y++ I + + +L LNF F
Sbjct: 566 RSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFP 625
Query: 357 LDTV--IAIL 364
V IAIL
Sbjct: 626 PIMVVIIAIL 635
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 266 bits (681), Expect = 4e-80
Identities = 128/391 (32%), Positives = 180/391 (46%), Gaps = 54/391 (13%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADT-----------VVLMA 49
++AI + +DV+C DKTGTLT NK+TV K I I GG D D +L A
Sbjct: 339 LNAIETLGSVDVICSDKTGTLTQNKMTVKK--IYINGGGKDIDDKDLKDSPALLRFLLAA 396
Query: 50 ARASQVE--------NLDVIDAAIV------GMLADPKEARADIQEVHFLPFDPTGKRTA 95
A + V D + A+V G D + + +PFD KR +
Sbjct: 397 ALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMS 456
Query: 96 LTYIDSEGKMHRVTKGSPEQILN-------LLHNKSKIGRKVNAVINKFAERGLRSLAVA 148
+ EGK KG+PE IL L + R + + + A GLR LAVA
Sbjct: 457 VIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVA 516
Query: 149 YQEVPEGSKESS----GSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAI 204
Y+++ K+ S F+GL + DPP D E I G+ V MITGD +
Sbjct: 517 YKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVET 576
Query: 205 AKETGRRLGMGTNMYPSSALSGQD-----RDESIVALPVDELIEKADGFAGVFPEHKYEI 259
A + G+ + + G + +E + EL+E+ FA V PE K I
Sbjct: 577 AIAIAKECGIEAEAESALVIDGAELDALSDEE------LAELVEELSVFARVSPEQKARI 630
Query: 260 VKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD-ATDAARSAADIVLTEPGLNVIITA 318
V+ LQ H+ M G+GVNDAPALK AD+GIA+ TDAA+ AADIVL + I+ A
Sbjct: 631 VEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLA 690
Query: 319 VLISRAIFQRMRNYMVRGIDGLSSTEFIQVL 349
V+ R ++ ++ + I L S +VL
Sbjct: 691 VVEGRRVYVNIKKF----ILYLLSKNVGEVL 717
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 211 bits (538), Expect = 2e-62
Identities = 104/330 (31%), Positives = 154/330 (46%), Gaps = 58/330 (17%)
Query: 3 AIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVID 62
A+ ++ +D LC DKTGTLT NK+T+ + I G D + ++ D ++
Sbjct: 233 ALEELGKVDYLCSDKTGTLTKNKMTLQG--VYIDGGKEDNSSSLVACDNNYLSG--DPME 288
Query: 63 AAIV---GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNL 119
A++ ++ + + + + PF KR ++ +G KG+PE IL
Sbjct: 289 KALLKSAELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILER 348
Query: 120 LHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHD 179
+N + A +GLR LA A +E+ + +F+GLI DP D
Sbjct: 349 CNN-------YEEKYLELARQGLRVLAFASKELEDD--------LEFLGLITFEDPLRPD 393
Query: 180 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 239
+ ETI + G+ V MITGD + AK + LG+
Sbjct: 394 AKETIEELKAAGIKVVMITGDNVLTAKAIAKELGI------------------------- 428
Query: 240 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAA 299
D FA V PE K +IV+ LQ + HI M G+GVNDAPALKKAD+GIA+ A
Sbjct: 429 ------DVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GA 477
Query: 300 RSAADIVLTEPGLNVIITAVLISRAIFQRM 329
++AADIVL + L+ I+ AV R IF +
Sbjct: 478 KAAADIVLLDDDLSAIVKAVKEGRKIFSNI 507
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 8e-41
Identities = 109/353 (30%), Positives = 172/353 (48%), Gaps = 35/353 (9%)
Query: 3 AIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQ----VENL 58
AI + MD+LC DKTGTLT +K+ ++ + +I G ++ V+ A S ++NL
Sbjct: 364 AIQNFGAMDILCTDKTGTLTQDKIVLENH-TDIS--GKTSERVLHSAWLNSHYQTGLKNL 420
Query: 59 DVIDAAIVGMLADPKEAR--ADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQI 116
+D A++ + + + Q++ +PFD +R ++ ++ + KG+ E+I
Sbjct: 421 --LDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEI 478
Query: 117 LNLLHNKSKIG----------RKVNAVINKFAERGLRSLAVAYQEVPEGSKESS---GSP 163
LN+ G R++ V + +GLR +AVA + +P + S
Sbjct: 479 LNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESD 538
Query: 164 WQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSA 223
G I DPP +A ++ + G+ VK++TGD +A + +G+
Sbjct: 539 LILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG----EV 594
Query: 224 LSGQDRDESIVALPVDEL---IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDA 280
L G D I L DEL E+ FA + P HK IV L+ H+ G +G+G+NDA
Sbjct: 595 LIGSD----IETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDA 650
Query: 281 PALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYM 333
PAL+ ADIGI+V A D AR AADI+L E L V+ V+ R F M Y+
Sbjct: 651 PALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYI 703
|
Length = 902 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 152 bits (385), Expect = 8e-40
Identities = 101/353 (28%), Positives = 172/353 (48%), Gaps = 31/353 (8%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMA--ARASQVENL 58
+SAI + MD+LC DKTGTLT +K+ ++K+ I + G ++ V+ MA Q
Sbjct: 327 LSAIQNFGAMDILCTDKTGTLTQDKIELEKH---IDSSGETSERVLKMAWLNSYFQTGWK 383
Query: 59 DVIDAAIVGMLAD--PKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQI 116
+V+D A++ L + ++ + ++V +PFD +R ++ + + KG+ E++
Sbjct: 384 NVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEM 443
Query: 117 LNLLHNKSKIG----------RKVNAVINKFAERGLRSLAVAYQEVPEGSKESS---GSP 163
L + +K G ++ + + +G+R +AVA + + G + +
Sbjct: 444 LTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQ 503
Query: 164 WQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSA 223
G + DPP + E I G+ VK++TGD + + +G+ N
Sbjct: 504 LIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN----DF 559
Query: 224 LSGQDRDESIVALPVDEL---IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDA 280
L G D I L +EL + K FA + P K I+ L+ H G +G+G+NDA
Sbjct: 560 LLGAD----IEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDA 615
Query: 281 PALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYM 333
PAL+KAD+GI+V A D A+ A+DI+L E L V+ V+ R F + Y+
Sbjct: 616 PALRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYL 668
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 152 bits (385), Expect = 8e-40
Identities = 110/376 (29%), Positives = 164/376 (43%), Gaps = 69/376 (18%)
Query: 11 DVLCCDKTGTLTLNKLTVDK--------NLIEIFA----GGVDADTVVLMAARASQVENL 58
+V+C DKTGTLT N +TV K ++ + G V D VL V +
Sbjct: 325 NVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRI 384
Query: 59 ---------------------DVIDAAIVGMLA-----DPKEARADIQEVHFLPFDPTGK 92
+ D A++ +L D +E + EV PF K
Sbjct: 385 LEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEV---PFSSERK 441
Query: 93 --RTALTYIDSEGKMHRVTKGSPEQILNLLHNKSK-----------IGRKVNAVINKFAE 139
+ +M + KG+ EQ+L K + + A
Sbjct: 442 WMAVKCVHRQDRSEMCFM-KGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMAS 500
Query: 140 RGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITG 199
GLR +A A PE + + F+GL+ + DPP E + ++ G+ + MITG
Sbjct: 501 AGLRVIAFASG--PEKGQLT------FLGLVGINDPPRPGVKEAVTTLITGGVRIIMITG 552
Query: 200 DQLAIAKETGRRLGMGTNMYPSSALSGQDRDE-SIVALPVDELIEKADGFAGVFPEHKYE 258
D A RRLGM S ++SG+ D L +++ K FA PEHK +
Sbjct: 553 DSQETAVSIARRLGMP--SKTSQSVSGEKLDAMDDQQL--SQIVPKVAVFARASPEHKMK 608
Query: 259 IVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD-ATDAARSAADIVLTEPGLNVIIT 317
IVK LQ R + M G+GVNDAPALK ADIG+A+ TD A+ AAD++LT+ I++
Sbjct: 609 IVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILS 668
Query: 318 AVLISRAIFQRMRNYM 333
A+ + IF ++N++
Sbjct: 669 AIEEGKGIFNNIKNFI 684
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 1e-34
Identities = 85/261 (32%), Positives = 127/261 (48%), Gaps = 46/261 (17%)
Query: 110 KGSPEQIL---NLLHNK--------SKIGRKVNAVINKFAER-GLRSLAVAYQEVPEGSK 157
KG+PE +L + N K+ + +VI + LR LA+A++++P+ +
Sbjct: 450 KGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPRE 509
Query: 158 ESSG----------SPWQFIGLIPLFDPP---IHDSAETIRRALSLGLGVKMITGDQLAI 204
E S FIG++ + DPP + D+ E R A G+ V MITGD
Sbjct: 510 EDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTA---GIRVIMITGDNKET 566
Query: 205 AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG--------FAGVFPEHK 256
A+ RR+G+ P ++ + S DE+ F+ V P HK
Sbjct: 567 AEAICRRIGI---FSPDEDVTFK----SFTGREFDEMGPAKQRAACRSAVLFSRVEPSHK 619
Query: 257 YEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII 316
E+V+ LQ + I M G+GVNDAPALKKADIGIA+ T+ A+ A+D+VL + I+
Sbjct: 620 SELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIV 679
Query: 317 TAVLISRAIFQRMRN---YMV 334
AV RAI+ M+ YM+
Sbjct: 680 AAVEEGRAIYNNMKQFIRYMI 700
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 2e-33
Identities = 89/324 (27%), Positives = 135/324 (41%), Gaps = 63/324 (19%)
Query: 7 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV 66
+A +D + DKTGTLT K V ++ A D D ++ +AA Q + AIV
Sbjct: 402 LAKVDTVVFDKTGTLTEGKPEV----TDVVALDGDEDELLALAAALEQHSE-HPLAKAIV 456
Query: 67 GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 126
A+ + E G+ +++E RV G+ LL +
Sbjct: 457 KAAAERGLPDVEDFEEI------PGRG-----VEAEVDGERVLVGNAR----LLGEEGID 501
Query: 127 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRR 186
++ I G + VA + +G+I L D D+ E I
Sbjct: 502 LPLLSERIEALESEGKTVVFVAVDG-------------KLVGVIALADELRPDAKEAIAA 548
Query: 187 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 246
+LG+ V M+TGD A+ + LG +DE+
Sbjct: 549 LKALGIKVVMLTGDNRRTAEAIAKELG------------------------IDEV----- 579
Query: 247 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 306
A + PE K EIV+ LQA M+G+G+NDAPAL AD+GIA+ TD A AAD+V
Sbjct: 580 -RAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVV 638
Query: 307 LTEPGLNVIITAVLISRAIFQRMR 330
L L+ + A+ +SRA + ++
Sbjct: 639 LMRDDLSAVPEAIDLSRATRRIIK 662
|
Length = 713 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 133 bits (336), Expect = 2e-33
Identities = 103/350 (29%), Positives = 168/350 (48%), Gaps = 37/350 (10%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMA----ARASQVE 56
++AI + MDVLC DKTGTLT +++ ++ +L G + V+ +A S ++
Sbjct: 360 LNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMK 416
Query: 57 NLDVIDAAIV--GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPE 114
NL +D A+V A ++V LPFD +R ++ D++G+ + KG+ E
Sbjct: 417 NL--MDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVE 474
Query: 115 QILNLLHNKSKIG----------RKVNAVINKFAERGLRSLAVAYQEVPEGSKE---SSG 161
++L + + ++ A+ + G R L VA +E+P G S+
Sbjct: 475 EMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTA 534
Query: 162 SPWQFI--GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY 219
+ G + DPP +A I G+ VK++TGD + + R +G+
Sbjct: 535 DERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE---- 590
Query: 220 PSSALSGQDRDESIVALPVDEL---IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNG 276
P L G + I A+ L +E+ FA + P K ++K LQA H G +G+G
Sbjct: 591 PGEPLLGTE----IEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDG 646
Query: 277 VNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIF 326
+NDAPAL+ AD+GI+V D A+ +ADI+L E L V+ V+ R F
Sbjct: 647 INDAPALRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETF 696
|
Length = 903 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 2e-32
Identities = 83/334 (24%), Positives = 135/334 (40%), Gaps = 68/334 (20%)
Query: 3 AIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVID 62
A+ +A + + DKTGTLT K TV IE ++ +L A A + + +
Sbjct: 239 ALEKLAKVKTVVFDKTGTLTTGKPTVVD--IEPLDDASISEEELLALAAALEQSSSHPLA 296
Query: 63 AAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQIL----N 118
AIV A + + + + + +G T E++
Sbjct: 297 RAIV--------RYAKKRGLELPK------QEDVEEVPGKGV--EATVDGGEEVRIGNPR 340
Query: 119 LLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIH 178
L + ++N+ +G + VA + +G+I L D
Sbjct: 341 FLELAIEPISASPDLLNEGESQGKTVVFVAVDG-------------ELLGVIALRDQLRP 387
Query: 179 DSAETIRRAL--SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVAL 236
++ E I AL + G+ + M+TGD + A+ LG
Sbjct: 388 EAKEAIA-ALKRAGGIKLVMLTGDNRSAAEAVAAELG----------------------- 423
Query: 237 PVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADAT 296
+DE+ A + PE K IVK LQ + M+G+G+NDAPAL AD+GIA+ +
Sbjct: 424 -IDEV------HAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGS 476
Query: 297 DAARSAADIVLTEPGLNVIITAVLISRAIFQRMR 330
D A AADIVL L+ + TA+ +SR + ++
Sbjct: 477 DVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIK 510
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 1e-29
Identities = 85/329 (25%), Positives = 132/329 (40%), Gaps = 65/329 (19%)
Query: 2 SAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVI 61
A+ A +D + DKTGTLT K TV + +F + + L AA + E+ +
Sbjct: 276 DALERAANIDTVVFDKTGTLTQGKPTV--TDVHVFGESDRDELLALAAALEAGSEH--PL 331
Query: 62 DAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH 121
AIV + + + +P G T EG ++ G+ + L
Sbjct: 332 AKAIVSYAKAKGITLSQVSDFKAIP----GIGVEGTV---EGHTIQL--GNEKL---LGE 379
Query: 122 NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSA 181
N K +V L E+ G++ L D ++
Sbjct: 380 NGLKTDGEVEEGGGT-----TSVLVAVNGEL--------------AGVLALADQLKPEAK 420
Query: 182 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 241
E I+ G+ M+TGD AK + LG
Sbjct: 421 EVIQALKRRGIEPVMLTGDNRKTAKAVAKELG---------------------------- 452
Query: 242 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARS 301
IE + A V P+ K ++K LQ + + M+G+G+NDAPAL +AD+GIA+ TD A
Sbjct: 453 IE--NVRAEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAIGAGTDVAIE 510
Query: 302 AADIVLTEPGLNVIITAVLISRAIFQRMR 330
AAD+VL LN + TA+ +SR +R++
Sbjct: 511 AADVVLLRNDLNDVATAIDLSRKTLRRIK 539
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 3e-27
Identities = 96/377 (25%), Positives = 158/377 (41%), Gaps = 63/377 (16%)
Query: 7 MAGMDVLCCDKTGTLTLNKLTVDKNLI-EIFAGGVDADTVVLMAARASQVENLDV----- 60
M +C DKTGTLT N ++V + I E D V R VE + +
Sbjct: 375 MGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSE 434
Query: 61 ---------------IDAAIVGM----LADPKEARADIQEVHFLPFDPTGKRTALTYIDS 101
+ A++ L D +E RA+ + V PF+ K ++ S
Sbjct: 435 EVVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHS 494
Query: 102 EGKMHRVTKGSPEQILNLLHNK------SKIGRK-----VNAVINKFAERGLRSLAVAY- 149
GK KG+ E +L + + VI A LR++ +AY
Sbjct: 495 GGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTICLAYR 554
Query: 150 ----QEVPEGSKESSGSPWQFIGLIPLFDP---PIHDSAETIRRALSLGLGVKMITGDQL 202
+E P + G IG++ + DP + ++ + +RA G+ V+M+TGD +
Sbjct: 555 DFAPEEFPRKDYPNKG--LTLIGVVGIKDPLRPGVREAVQECQRA---GITVRMVTGDNI 609
Query: 203 AIAKETGRRLGMGTNMYPSSALSGQD-----RDESIVALPVDELIEKADGFAGVFPEHKY 257
AK R G+ T + A+ G++ +E LP K A P K
Sbjct: 610 DTAKAIARNCGILT--FGGLAMEGKEFRSLVYEEMDPILP------KLRVLARSSPLDKQ 661
Query: 258 EIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA-TDAARSAADIVLTEPGLNVII 316
+V L+ + + G+G NDAPALK AD+G ++ + T+ A+ A+DI+L + I+
Sbjct: 662 LLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIV 721
Query: 317 TAVLISRAIFQRMRNYM 333
AV R ++ +R ++
Sbjct: 722 RAVKWGRNVYDNIRKFL 738
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 8e-26
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 43/303 (14%)
Query: 71 DPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRV-TKGSPEQILNLLHN-KSKIGR 128
+ K A + + PFD KR A Y D+ G+ + + KG+ E+I+ + K G
Sbjct: 517 NEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGV 576
Query: 129 KVN-----------AVINKFAERGLRSLAVAYQEVPEG------------SKESSGSPWQ 165
K++ A + A GLR LA A + + ++ ++ S +
Sbjct: 577 KISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLE 636
Query: 166 FIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG-MGTNMYPSS-- 222
F+GLI ++DPP ++SA + + G+ V M+TGD AK + +G + N
Sbjct: 637 FLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDE 696
Query: 223 -----ALSGQD----RDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMI 273
++G DE + L L+ A P+ K ++++ L R C M
Sbjct: 697 IMDSMVMTGSQFDALSDEEVDDLKALCLV-----IARCAPQTKVKMIEALHRRKAFCAMT 751
Query: 274 GNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNY 332
G+GVND+P+LK A++GIA+ + +D A+ A+DIVL++ I+ A+ R +F + +
Sbjct: 752 GDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKF 811
Query: 333 MVR 335
++
Sbjct: 812 VLH 814
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 3e-23
Identities = 109/428 (25%), Positives = 172/428 (40%), Gaps = 113/428 (26%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTV-----DKNLIEIFAGGVDADT----------- 44
+ A+ + +C DKTGTLT N++TV D + E ADT
Sbjct: 335 LEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHE-------ADTTEDQSGVSFDK 387
Query: 45 ----------VVLMAARA---SQVENLDVIDAAIVG-------------MLADPKEARAD 78
+ + RA + EN+ ++ A+ G L E R
Sbjct: 388 SSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRER 447
Query: 79 IQEVHFLPFDPTGKR--TALTYIDSEGKMH-RVTKGSPEQILN-----LLHNKSK-IGRK 129
+V +PF+ T K + D H V KG+PE+IL L+H K + + +
Sbjct: 448 NPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEE 507
Query: 130 VNAVINK-------FAER--GLRSLAVAYQEVPEGSK---ESSGSPWQ---FIGLIPLFD 174
+ ER G L + ++ PEG + + P F+GLI + D
Sbjct: 508 LKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMID 567
Query: 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIV 234
PP + + + S G+ V M+TGD AK + +G+ + G + E I
Sbjct: 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIIS--------EGNETVEDIA 619
Query: 235 A---LPVDELIEKADG----------------------------FAGVFPEHKYEIVKHL 263
A +PV ++ + FA P+ K IV+
Sbjct: 620 ARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGC 679
Query: 264 QARNHICGMIGNGVNDAPALKKADIGIAVADA-TDAARSAADIVLTEPGLNVIITAVLIS 322
Q + I + G+GVND+PALKKADIG+A+ A +D ++ AAD++L + I+T V
Sbjct: 680 QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEG 739
Query: 323 RAIFQRMR 330
R IF ++
Sbjct: 740 RLIFDNLK 747
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 96.6 bits (241), Expect = 3e-21
Identities = 86/323 (26%), Positives = 134/323 (41%), Gaps = 88/323 (27%)
Query: 5 VDMAG-MDVLCCDKTGTLTL-NKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVID 62
V+ AG +D L DKTGT+TL N+ + I GV + + A AS + D
Sbjct: 293 VEAAGDVDTLLLDKTGTITLGNRQASEF----IPVPGVSEEELADAAQLAS------LAD 342
Query: 63 A-----AIVGMLADPKEARADIQEVH----FLPFDPTGKRTALTYIDSEGKMHRVTKGSP 113
+IV LA ++ F+PF +T ++ +D G + KG+
Sbjct: 343 ETPEGRSIV-ELAKKLGIELREDDLQSHAEFVPFT---AQTRMSGVDLPGG-REIRKGAV 397
Query: 114 EQILNLLH-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPL 172
+ I + I ++A +++ + G L V E + +G+I L
Sbjct: 398 DAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVV-----ENGR--------ILGVIYL 444
Query: 173 FD---PPIHDSAETIRRALSLGLGVK--MITGDQ----LAIAKETGRRLGMGTNMYPSSA 223
D P I + +R+ +G+K MITGD AIA E G
Sbjct: 445 KDIVKPGIKERFAELRK-----MGIKTVMITGDNPLTAAAIAAEAG-------------- 485
Query: 224 LSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPAL 283
VD+ I +A PE K +++ QA + M G+G NDAPAL
Sbjct: 486 --------------VDDFIAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDAPAL 525
Query: 284 KKADIGIAVADATDAARSAADIV 306
+AD+G+A+ T AA+ AA++V
Sbjct: 526 AQADVGVAMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 95.5 bits (238), Expect = 5e-21
Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 36/175 (20%)
Query: 165 QFIGLIPLFDPPIHDSAETIRRALSLGLG-VKMITGDQLAIAKETGRRLGMGTNMYPSSA 223
++G I L D P D+AE I +LG+ V M+TGD+ A+A+ R LG
Sbjct: 352 TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG---------- 401
Query: 224 LSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPAL 283
+DE+ A + PE K EIVK L+ + M+G+G+NDAPAL
Sbjct: 402 --------------IDEV------HAELLPEDKLEIVKELREKYGPVAMVGDGINDAPAL 441
Query: 284 KKADIGIAV-ADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 337
AD+GIA+ A +D A AD+VL L+ + A+ ++R R R + + +
Sbjct: 442 AAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLAR----RTRRIVKQNV 492
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 1e-20
Identities = 88/391 (22%), Positives = 145/391 (37%), Gaps = 103/391 (26%)
Query: 11 DVLCCDKTGTLTLNKLTV--------DKNLIEIF---AGGVDADTVVLMAARAS--QVEN 57
DV C DKTGTLT + L + ++ ++I + + T +A S ++E
Sbjct: 449 DVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEG 508
Query: 58 ------LDVIDAAIVG------------------MLADPKEARADIQEVHFLPFDPTGKR 93
LD G + D I + F +R
Sbjct: 509 KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSI--IRRFQFSSALQR 566
Query: 94 TA-LTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEV 152
+ + + E KG+PE I +L + V+ + G R LA+AY+E+
Sbjct: 567 MSVIVSTNDERSPDAFVKGAPETIQSLCS-PETVPSDYQEVLKSYTREGYRVLALAYKEL 625
Query: 153 P--------EGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQL-- 202
P + S+++ S F+G I +P D+ E I+ + MITGD
Sbjct: 626 PKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685
Query: 203 --AIAKETG-----RRLGMGTNMYPSSALS------------------------GQDRDE 231
+A+E G L + P S GQD E
Sbjct: 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVE 745
Query: 232 SIVALP--------------------VDELIEKADGFAGVFPEHKYEIVKHLQARNHICG 271
++A + L+ FA + P+ K +V+ LQ ++ G
Sbjct: 746 DLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVG 805
Query: 272 MIGNGVNDAPALKKADIGIAVADATDAARSA 302
M G+G ND ALK+AD+GI++++A +A+ +A
Sbjct: 806 MCGDGANDCGALKQADVGISLSEA-EASVAA 835
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 92.6 bits (231), Expect = 4e-20
Identities = 86/333 (25%), Positives = 137/333 (41%), Gaps = 109/333 (32%)
Query: 5 VDMAG-MDVLCCDKTGTLTL-NKLTVDKNLIEIF--AGGVDADTVVLMAARASQVENLDV 60
V+ AG +D L DKTGT+TL N+ + F GV + ++
Sbjct: 292 VEAAGDVDTLLLDKTGTITLGNRQASE------FLPVPGVTEE---------------EL 330
Query: 61 IDAAIVGMLADP-----------------KEARADIQEVHFLPFDPTGKRTALTYIDSEG 103
DAA + LAD +E F+PF +T ++ +D +G
Sbjct: 331 ADAAQLSSLADETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFS---AQTRMSGVDLDG 387
Query: 104 KMHRVTKGSPEQILNLLH-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGS 162
+ KG+ + I + N +++A +++ A +G L VA E ++
Sbjct: 388 --REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVA-----EDNR----- 435
Query: 163 PWQFIGLIPLFD---PPIHDSAETIRRALSLGLGVK--MITGD-QL---AIAKETGRRLG 213
+G+I L D P I + +R+ +G+K MITGD L AIA E G
Sbjct: 436 ---VLGVIYLKDIVKPGIKERFAELRK-----MGIKTVMITGDNPLTAAAIAAEAG---- 483
Query: 214 MGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMI 273
VD+ + +A PE K +++ QA + M
Sbjct: 484 ------------------------VDDFLAEAT------PEDKLALIRQEQAEGRLVAMT 513
Query: 274 GNGVNDAPALKKADIGIAVADATDAARSAADIV 306
G+G NDAPAL +AD+G+A+ T AA+ A ++V
Sbjct: 514 GDGTNDAPALAQADVGVAMNSGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 89.0 bits (221), Expect = 7e-19
Identities = 89/327 (27%), Positives = 134/327 (40%), Gaps = 74/327 (22%)
Query: 10 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGML 69
+D L DKTGTLT K V ++ F GVD + +AA Q + +
Sbjct: 517 LDTLVFDKTGTLTEGKPQVVA--VKTF-NGVDEAQALRLAAALEQGSSHPL--------- 564
Query: 70 ADPKEARADIQEVHFLPF-DPTGKRT-ALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIG 127
ARA + + + G RT + E + H + G+ LL+ +
Sbjct: 565 -----ARAILDKAGDMTLPQVNGFRTLRGLGVSGEAEGHALLLGNQ----ALLNEQQVDT 615
Query: 128 RKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRA 187
+ + A I A +G + +A + L+ + DP DS ++R
Sbjct: 616 KALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPLRSDSVAALQRL 662
Query: 188 LSLGLGVKMITGDQL----AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 243
G + M+TGD AIAKE G +DE+I
Sbjct: 663 HKAGYRLVMLTGDNPTTANAIAKEAG----------------------------IDEVI- 693
Query: 244 KADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAA 303
AGV P+ K E +K LQ++ M+G+G+NDAPAL +AD+GIA+ +D A A
Sbjct: 694 -----AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETA 748
Query: 304 DIVLTEPGLNVIITAVLISRAIFQRMR 330
I L L + A+ ISRA + M+
Sbjct: 749 AITLMRHSLMGVADALAISRATLRNMK 775
|
Length = 834 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 79.5 bits (196), Expect = 8e-16
Identities = 85/312 (27%), Positives = 133/312 (42%), Gaps = 67/312 (21%)
Query: 5 VDMAG-MDVLCCDKTGTLTL-NKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVID 62
V+ G +D L DKTGT+TL N+L + I A GVD T+ A AS + D +
Sbjct: 293 VEACGDVDTLLLDKTGTITLGNRLASEF----IPAQGVDEKTLADAAQLASLAD--DTPE 346
Query: 63 AAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH- 121
+ +LA R D + F +T ++ I+ + + KG+ + I +
Sbjct: 347 GKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDNG-RMIRKGAVDAIKRHVEA 405
Query: 122 NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFD---PPIH 178
N I ++ +++ A +G L V E ++ G+I L D I
Sbjct: 406 NGGHIPTDLDQAVDQVARQGGTPLVVC-----EDNR--------IYGVIYLKDIVKGGIK 452
Query: 179 DSAETIRRALSLGLGVKMITGDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRDESIV 234
+ +R+ +G+ MITGD AIA E G
Sbjct: 453 ERFAQLRK---MGIKTIMITGDNRLTAAAIAAEAG------------------------- 484
Query: 235 ALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD 294
VD+ I +A PE K +++ QA + M G+G NDAPAL +AD+G+A+
Sbjct: 485 ---VDDFIAEAT------PEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNS 535
Query: 295 ATDAARSAADIV 306
T AA+ AA++V
Sbjct: 536 GTQAAKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 4e-13
Identities = 49/160 (30%), Positives = 67/160 (41%), Gaps = 32/160 (20%)
Query: 165 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 224
+GLI L D D+ + I +LG+ M+TGD A LG+
Sbjct: 558 DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI---------- 607
Query: 225 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 284
D AG+ PE K + V L + M+G+G+NDAPA+K
Sbjct: 608 ---------------------DFRAGLLPEDKVKAVTELNQHAPL-AMVGDGINDAPAMK 645
Query: 285 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRA 324
A IGIA+ TD A AD LT L + + +SRA
Sbjct: 646 AASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685
|
Length = 741 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 62.8 bits (152), Expect = 2e-10
Identities = 72/329 (21%), Positives = 132/329 (40%), Gaps = 62/329 (18%)
Query: 10 MDVLCCDKTGTLTL-NKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 68
++VL DKTGT+T N++ I + + + ++ AA S + + D + +
Sbjct: 298 VNVLILDKTGTITYGNRMADA--FIPVKSSSFER---LVKAAYESSIAD-DTPEGRSIVK 351
Query: 69 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKS-KIG 127
LA + + ++PF + + + + E V KG+P ++ + I
Sbjct: 352 LAYKQHIDLPQEVGEYIPFTAETRMSGVKFTTRE-----VYKGAPNSMVKRVKEAGGHIP 406
Query: 128 RKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRA 187
++A++ +++G L V +G+I L D E R
Sbjct: 407 VDLDALVKGVSKKGGTPLVVLEDNE-------------ILGVIYLKDVIKDGLVERFREL 453
Query: 188 LSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG 247
+G+ M TGD A + G VD + +
Sbjct: 454 REMGIETVMCTGDNELTAATIAKEAG------------------------VDRFVAECK- 488
Query: 248 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVL 307
PE K +++ QA+ HI M G+G NDAPAL +A++G+A+ T +A+ AA+++
Sbjct: 489 -----PEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLID 543
Query: 308 TEPGLNVIITAVLISRAIFQRMRNYMVRG 336
+ ++ VLI + + M RG
Sbjct: 544 LDSNPTKLMEVVLIGKQLL------MTRG 566
|
Length = 673 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 6e-09
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 228 DRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD 287
DR S+V L I FAG PE K +I++ L+ R M+GNG ND AL++AD
Sbjct: 54 DRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREAD 113
Query: 288 IGIAV---ADATDAARSAADIVLTEPGLNVIITA 318
+GI + AD+VL E + +
Sbjct: 114 LGICTIQQEGVPERLLLTADVVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 8e-07
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 19/121 (15%)
Query: 167 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSG 226
+GLI L DP + E ++ G+ + ++TGD A R LG+ + +S
Sbjct: 86 LGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGL-----FDALVSA 140
Query: 227 QDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 286
V P ++ E A ++ L + M+G+GVND PA K A
Sbjct: 141 DLYGLVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAKAA 186
Query: 287 D 287
Sbjct: 187 G 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 273 IGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 310
IG+ ND + A G+AVA+A + + AAD V +
Sbjct: 179 IGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.001
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 11/84 (13%)
Query: 239 DELIEKADGFAG------VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADI 288
+ L + G V +K + + L + I +G+G ND +K A +
Sbjct: 130 NRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGL 189
Query: 289 GIAVADATDAARSAADIVLTEPGL 312
GIA +A + ADI + + L
Sbjct: 190 GIAF-NAKPKLQQKADICINKKDL 212
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 272 MIGNGVNDAPALKKADIGIAVADATDAARSAADIV 306
G+G+ND L+ A G+A+ +A + ++ AD V
Sbjct: 209 AFGDGMNDIEMLEAAGYGVAMGNADEELKALADYV 243
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.003
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 273 IGNGVNDAPALKKADIGIAVADATDAARSAADIV 306
G+G ND L+ A +G+A+ +A+ ++AAD V
Sbjct: 208 FGDGENDIEMLELAGLGVAMGNASPEVKAAADYV 241
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 456 | |||
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.96 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.64 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.21 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.2 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.14 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.12 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.09 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.07 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.07 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.04 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.03 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.03 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.02 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.01 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.94 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.93 | |
| PLN02887 | 580 | hydrolase family protein | 98.89 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.88 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.84 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.81 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.8 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.78 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.76 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.73 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.73 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.62 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.61 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.55 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.52 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.46 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.41 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.35 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.33 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.33 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.32 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.28 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.26 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.16 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.1 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.07 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.04 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.99 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.99 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.89 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.89 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.87 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.87 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.81 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.75 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.72 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.69 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 97.68 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.65 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.63 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.59 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.58 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.5 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.47 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.46 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.45 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.42 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.4 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.4 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.4 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.36 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.28 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.23 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.2 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.13 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.12 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 97.09 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 97.04 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 97.0 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.98 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.98 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.96 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.96 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.96 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.86 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.86 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.83 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.79 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.77 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.76 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.73 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.7 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.65 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.65 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.62 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.49 | |
| PLN02940 | 382 | riboflavin kinase | 96.37 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.31 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.26 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 96.2 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.19 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 96.17 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.16 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 96.11 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 96.05 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.89 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.82 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.58 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 95.55 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 95.5 | |
| PLN02811 | 220 | hydrolase | 95.44 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 95.36 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 95.16 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 95.09 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 95.07 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 95.01 | |
| PLN03017 | 366 | trehalose-phosphatase | 94.91 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 94.88 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 94.83 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 94.77 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 94.41 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 94.4 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 94.36 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.31 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 93.64 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 93.13 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 93.1 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 92.59 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 92.27 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 92.06 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 91.73 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 91.45 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 90.23 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 90.19 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 89.87 | |
| PLN02423 | 245 | phosphomannomutase | 89.33 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 89.33 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 89.12 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 85.45 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 84.81 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 84.69 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 84.27 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 84.0 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 83.53 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 83.24 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 82.33 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 81.26 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 80.96 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 80.93 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 80.47 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 80.08 |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-98 Score=757.14 Aligned_cols=446 Identities=74% Similarity=1.091 Sum_probs=426.2
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcce
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ 80 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~ 80 (456)
|+|||+|+++|++|+|||||||.|+++|++..++++.++.++|+++++|+++++.+|+|+||+|++++++||++++.+|+
T Consensus 318 mtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ik 397 (942)
T KOG0205|consen 318 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIK 397 (942)
T ss_pred HHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCce
Confidence 78999999999999999999999999999998889999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCC
Q 012767 81 EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESS 160 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~ 160 (456)
+++|+||||++||++.+|.+++|++++++||+|++|+++|+.+.++++.+++.+++|+++|+|.|+||++.+|++.+++.
T Consensus 398 evhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~ 477 (942)
T KOG0205|consen 398 EVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESP 477 (942)
T ss_pred EEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHH
Q 012767 161 GSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240 (456)
Q Consensus 161 e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 240 (456)
+.+|+|+|++++.||||+++.++|++....|+.|.|+|||....++++++++|+++|++|+..+.|.+.++.+...+.++
T Consensus 478 g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~e 557 (942)
T KOG0205|consen 478 GGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDE 557 (942)
T ss_pred CCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 241 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
++++++.||.++|+||+++|+.||++||.|+|+|||+||+|+||+||+|||+.+++|+|+.++|||+++|+++.|+.++.
T Consensus 558 lie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avl 637 (942)
T KOG0205|consen 558 LIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (942)
T ss_pred HhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-------------------------------------------------------------
Q 012767 321 ISRAIFQRMRNYMVRGIDG------------------------------------------------------------- 339 (456)
Q Consensus 321 ~~R~i~~~i~~~~~y~~~~------------------------------------------------------------- 339 (456)
.||.+|+||++|.+|++..
T Consensus 638 tSraIfqrmknytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatg 717 (942)
T KOG0205|consen 638 TSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATG 717 (942)
T ss_pred HHHHHHHHHhhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheee
Confidence 9999999999999987722
Q ss_pred ---------------------------------------HHHHHHHHHHH------------------------------
Q 012767 340 ---------------------------------------LSSTEFIQVLE------------------------------ 350 (456)
Q Consensus 340 ---------------------------------------~~~~i~l~~~~------------------------------ 350 (456)
++.++|+++|+
T Consensus 718 vVlgtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~ 797 (942)
T KOG0205|consen 718 VVLGTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFA 797 (942)
T ss_pred eEehhHHHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHH
Confidence 44444555444
Q ss_pred ----------------------------------HhhhhhHHHHHHH---------------HHhcccCccccchHHHHH
Q 012767 351 ----------------------------------LNFLFTLDTVIAI---------------LQTAFTSKKDFGKEEREL 381 (456)
Q Consensus 351 ----------------------------------~~~~~pl~~~~~l---------------~~~~~~~~~~~~~~~~~~ 381 (456)
+..|+|++.+.+. .+++|+++++||.+.++.
T Consensus 798 aqliatliavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a 877 (942)
T KOG0205|consen 798 AQLIATLIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEEREA 877 (942)
T ss_pred HHHHHHHHHHHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhhh
Confidence 4467788877774 467899999999999999
Q ss_pred HHHHhhhhhhcCCCCCCccccccccccccchhHHHHHhhhhHHhhhhhhcccchhhhhhhhcCCCHhhhhhcccC
Q 012767 382 LWAHAQRTLHGLQPPDTSMFSVRSSYGELSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 456 (456)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (456)
+|+..||++||+++++ -+++|+++++++||+|++|+|++|+||+|+|||+||||+|++++ |||||
T Consensus 878 ~~~~~qrt~~~lq~~~---------~~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 878 QWALAQRTLHGLQPPE---------GRELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred HHHHhhhhhcccCCCc---------cchhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 9999999999999995 16899999999999999999999999999999999999999999 99997
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-71 Score=615.45 Aligned_cols=398 Identities=31% Similarity=0.449 Sum_probs=322.5
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCC---------hHHHHHHHHHhcccC--------CCChHHH
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD---------ADTVVLMAARASQVE--------NLDVIDA 63 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~---------~~~il~~aa~~~~~~--------~~~pi~~ 63 (456)
|.++|+||++|+||||||||||+|+|+|.++++.....+.+ ...++..++.|+... ..||.|.
T Consensus 339 l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~ 418 (917)
T COG0474 339 LNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEG 418 (917)
T ss_pred cchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCccHH
Confidence 57999999999999999999999999999988652011122 112455555665322 3589999
Q ss_pred HHHHhhcC------chhhhhcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccC-------CchhhhHH
Q 012767 64 AIVGMLAD------PKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-------KSKIGRKV 130 (456)
Q Consensus 64 ai~~~~~~------~~~~~~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~-------~~~~~~~~ 130 (456)
||+.++.+ ....+..+++++.+||+|.+|||++++++.+|+++.++|||||.|+++|.. .++..+.+
T Consensus 419 Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~ 498 (917)
T COG0474 419 ALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTL 498 (917)
T ss_pred HHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHH
Confidence 99988753 333445567799999999999999999977777899999999999999963 34566788
Q ss_pred HHHHHHHHHccCeeeEEeeeecCCCCc----CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH
Q 012767 131 NAVINKFAERGLRSLAVAYQEVPEGSK----ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK 206 (456)
Q Consensus 131 ~~~i~~~~~~Glr~l~vA~~~~~~~~~----~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~ 206 (456)
....++|+++|+|++++||+.++.... +..|+++.|+|+++|+||||++++++|+.|+++||+|||+|||+..||+
T Consensus 499 ~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~ 578 (917)
T COG0474 499 EEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAI 578 (917)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHH
Confidence 999999999999999999998765543 5789999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhc
Q 012767 207 ETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 286 (456)
Q Consensus 207 ~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~A 286 (456)
+||++||+..+.....+++|.+.+...+. ++.+.+++..+|||++|+||..+|+.||++|+.|+|+|||+||+||||+|
T Consensus 579 aIa~~~Gi~~~~~~~~vi~G~el~~l~~~-el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~A 657 (917)
T COG0474 579 AIAKECGIEAEAESALVIDGAELDALSDE-ELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAA 657 (917)
T ss_pred HHHHHcCCCCCCCceeEeehHHhhhcCHH-HHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhc
Confidence 99999999876544457778776543333 56678888899999999999999999999999999999999999999999
Q ss_pred CeeEEec-cccHHHhhcccEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHh--hhhhHHHHHH
Q 012767 287 DIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQ-VLELN--FLFTLDTVIA 362 (456)
Q Consensus 287 dvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~-~~~~~--~~~pl~~~~~ 362 (456)
||||||+ +|+|+++++||+++++++|..|..++.+||++|+|+++++.|.+..+...++.+ ++.++ ..+|+.+.++
T Consensus 658 DVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~ql 737 (917)
T COG0474 658 DVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQL 737 (917)
T ss_pred CccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHH
Confidence 9999999 699999999999999999999999999999999999999999987655533333 33333 2368999999
Q ss_pred H-HHhcccCccccchHHHHHHHHHhhhhhhcCCCCCCcccc
Q 012767 363 I-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPPDTSMFS 402 (456)
Q Consensus 363 l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (456)
+ .++.++..+.+..+.....|....++ .+.|.+.+|+
T Consensus 738 l~inll~d~~pa~~L~~~~~~~~~m~~~---~~~p~~~i~~ 775 (917)
T COG0474 738 LWINLLTDSLPALALGVEDPESDVMKRP---PRGPEEGLFN 775 (917)
T ss_pred HHHHHHHhhhhhheeecCCCcccccccC---CCCccccccc
Confidence 8 66666666665543333333333333 3344444554
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-67 Score=547.26 Aligned_cols=377 Identities=27% Similarity=0.415 Sum_probs=303.3
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeeccc-----------CCCC------------------h---HHHHHH
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFA-----------GGVD------------------A---DTVVLM 48 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~-----------~~~~------------------~---~~il~~ 48 (456)
|.++|+||.+++||+|||||||+|+|+|.+.++.... .+++ . .+++.+
T Consensus 323 LPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i 402 (972)
T KOG0202|consen 323 LPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEI 402 (972)
T ss_pred ccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHH
Confidence 5689999999999999999999999999998762110 0111 1 133444
Q ss_pred HHHhccc-----C------CCChHHHHHHHhhc-----Cch---h-----------hhhcceEEEeecCCCCCceEEEEE
Q 012767 49 AARASQV-----E------NLDVIDAAIVGMLA-----DPK---E-----------ARADIQEVHFLPFDPTGKRTALTY 98 (456)
Q Consensus 49 aa~~~~~-----~------~~~pi~~ai~~~~~-----~~~---~-----------~~~~~~~~~~~pf~~~~k~~~v~~ 98 (456)
++.|... . ...|.|.||...+. +.. . ....++.+..+||++.+|+|++.+
T Consensus 403 ~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c 482 (972)
T KOG0202|consen 403 CALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKC 482 (972)
T ss_pred HHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEE
Confidence 5554321 1 23588889876542 111 0 123345568999999999999999
Q ss_pred EecCCc--EEEEEcCcHHHHHhhcc------------CCchhhhHHHHHHHHHHHccCeeeEEeeeecCCC---------
Q 012767 99 IDSEGK--MHRVTKGSPEQILNLLH------------NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG--------- 155 (456)
Q Consensus 99 ~~~~g~--~~~~~KGa~e~Il~~~~------------~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~--------- 155 (456)
.+..+. ...|.|||+|.|+++|+ .++..++.+.+...+|.++|+|+|++|++..|..
T Consensus 483 ~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~ 562 (972)
T KOG0202|consen 483 SPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLND 562 (972)
T ss_pred ecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcc
Confidence 876664 68899999999999994 1234567888899999999999999999977631
Q ss_pred --CcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccccCCchhh
Q 012767 156 --SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQDRDE 231 (456)
Q Consensus 156 --~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~--~~~~l~g~~~~~ 231 (456)
.+...|.+++|+|++++.||||++++++|+.|+++||+|+|+|||+.+||++||+++|+..+.. ....++|.+.++
T Consensus 563 ~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ 642 (972)
T KOG0202|consen 563 TSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDD 642 (972)
T ss_pred cccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhc
Confidence 2445789999999999999999999999999999999999999999999999999999986543 446677877664
Q ss_pred hhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCC
Q 012767 232 SIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEP 310 (456)
Q Consensus 232 ~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~ 310 (456)
+...+.++.+....+|+|++|+||.+||+.||++|..|+|+|||+||+||||.|||||||| +|||+||+|||+||.|+
T Consensus 643 -ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DD 721 (972)
T KOG0202|consen 643 -LSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADD 721 (972)
T ss_pred -CCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecC
Confidence 3334456778888899999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHh-hhhhHHHHHHH-HHhcccCccccchHH
Q 012767 311 GLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQ-VLELN-FLFTLDTVIAI-LQTAFTSKKDFGKEE 378 (456)
Q Consensus 311 ~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~-~~~~~-~~~pl~~~~~l-~~~~~~~~~~~~~~~ 378 (456)
||+.|+.+|++||.+|.||++|+.|.+..+..++.+. ++..+ ...||.++++| .+.....+|.-+.+-
T Consensus 722 nFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ 792 (972)
T KOG0202|consen 722 NFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGF 792 (972)
T ss_pred cHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCC
Confidence 9999999999999999999999999997655544433 34444 55899999999 556666665544433
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-67 Score=546.02 Aligned_cols=442 Identities=22% Similarity=0.311 Sum_probs=338.4
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCC--------CChH--HHHHHH-HHhcc-------------cC
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGG--------VDAD--TVVLMA-ARASQ-------------VE 56 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~--------~~~~--~il~~a-a~~~~-------------~~ 56 (456)
|+|||+||.+++||+|||||||+|.|+|.+.++....+. .++. +++..+ +..+. ..
T Consensus 426 L~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~ 505 (1034)
T KOG0204|consen 426 LDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQ 505 (1034)
T ss_pred hHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccc
Confidence 689999999999999999999999999999887432211 2221 122111 11111 01
Q ss_pred CCChHHHHHHHhhc----CchhhhhcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccC----------
Q 012767 57 NLDVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN---------- 122 (456)
Q Consensus 57 ~~~pi~~ai~~~~~----~~~~~~~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~---------- 122 (456)
..+|.++||+++.. +....|...++++++||||.+|+|+++++.++|..+.++|||+|.++..|..
T Consensus 506 ~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~ 585 (1034)
T KOG0204|consen 506 LGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVP 585 (1034)
T ss_pred cCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEee
Confidence 23699999998753 4455677788999999999999999999977776349999999999999962
Q ss_pred -CchhhhHHHHHHHHHHHccCeeeEEeeeecCCC-------C-cCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCe
Q 012767 123 -KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG-------S-KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLG 193 (456)
Q Consensus 123 -~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~-------~-~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~ 193 (456)
+++-...++..|+.|+.+|+|++|+||++++.. + .+.++.+++++|+++++||.|||++++|+.|+.+||.
T Consensus 586 ~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGIt 665 (1034)
T KOG0204|consen 586 FNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGIT 665 (1034)
T ss_pred CCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcE
Confidence 233445889999999999999999999985432 1 1345789999999999999999999999999999999
Q ss_pred EEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEe
Q 012767 194 VKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMI 273 (456)
Q Consensus 194 v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~i 273 (456)
|.|+||||..||++||.+|||.+..-+-..+.|.+.. .+.+.+.++++.+..++||.+|.||+-+|+.|+++|++|+.+
T Consensus 666 VRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr-~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVT 744 (1034)
T KOG0204|consen 666 VRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFR-ELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVT 744 (1034)
T ss_pred EEEEeCCcHHHHHHHHHHcccccCCCccceecchhhh-hcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEe
Confidence 9999999999999999999998876666778887776 445566788999999999999999999999999999999999
Q ss_pred cCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012767 274 GNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN 352 (456)
Q Consensus 274 GDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~ 352 (456)
|||.||+|||++||||.||| .||++||++|||||+++||++|+.++.|||.+|.||+||+.|.+..+..|+...+...+
T Consensus 745 GDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~ 824 (1034)
T KOG0204|consen 745 GDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSAC 824 (1034)
T ss_pred cCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhh
Confidence 99999999999999999999 89999999999999999999999999999999999999999988765555555443322
Q ss_pred --hhhhHHHHHHH-HHhcccCccccchHHHHHHHHHhhhhhhcCCCCCCccccccccccccchhHHHHHhhhhHHhhhhh
Q 012767 353 --FLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPPDTSMFSVRSSYGELSWMAEEARRRAEIARLREL 429 (456)
Q Consensus 353 --~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (456)
.-.||..+|+| .++.+-....+..+.+.+.-....|.+.|...| +-.+++++.+ .-+...|+--+
T Consensus 825 ~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~----LIt~tMwkni--------l~qa~YQl~vl 892 (1034)
T KOG0204|consen 825 ATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKP----LITRTMWKNI--------LGQAVYQLIVL 892 (1034)
T ss_pred hcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCc----chHHHHHHHH--------HHHHHHHHHHH
Confidence 55899999998 333332221111111101111223444555554 2233333322 24566667777
Q ss_pred hcccchhhhhhhhcCCCHhhhhhccc
Q 012767 430 HTLKGHVESLIRLKGLDIDAIQQSYS 455 (456)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (456)
-.|...-++...+.+.+-..-.+|||
T Consensus 893 ~iL~F~G~~if~~~~~~~~~~~~~nT 918 (1034)
T KOG0204|consen 893 FILNFAGKSIFGLNGPLHSPPSVHNT 918 (1034)
T ss_pred HHHHhcchhhhccCCCCCCchhhhee
Confidence 77777777776666665544445555
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-65 Score=561.91 Aligned_cols=352 Identities=55% Similarity=0.865 Sum_probs=299.4
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcce
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ 80 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~ 80 (456)
++++|+||++|+||||||||||+|+|+|.+++. ...+.+.++++.+++.++...+.||+|.|++.++.+....+..++
T Consensus 277 l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~ 354 (755)
T TIGR01647 277 LTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYK 354 (755)
T ss_pred cHHHHhccCCcEEEecCCCccccCceEEEEEEe--cCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCc
Confidence 579999999999999999999999999998653 222367788888888776555667999999998776554556788
Q ss_pred EEEeecCCCCCceEEEEEEecC-CcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCC
Q 012767 81 EVHFLPFDPTGKRTALTYIDSE-GKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKES 159 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~~~~~~-g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~ 159 (456)
.++++||++.+|+|++++.+.+ |+.++++||+|+.++++|....+.++.+.+.+++++.+|+|++++|+++
T Consensus 355 ~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~-------- 426 (755)
T TIGR01647 355 VLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD-------- 426 (755)
T ss_pred eEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------
Confidence 8999999999999998887653 7778899999999999998766667788888999999999999999973
Q ss_pred CCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccc-cCCchhhhhhcCCh
Q 012767 160 SGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL-SGQDRDESIVALPV 238 (456)
Q Consensus 160 ~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l-~g~~~~~~~~~~~~ 238 (456)
.|++|+|+|+++|+|||||+++++|+.|+++||+|+|+|||++.+|.++|+++||..+.+....+ .|.+ .+.+...++
T Consensus 427 ~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~-~~~~~~~~~ 505 (755)
T TIGR01647 427 EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDN-RDDLPSGEL 505 (755)
T ss_pred CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcc-hhhCCHHHH
Confidence 25789999999999999999999999999999999999999999999999999997543322222 2221 123333457
Q ss_pred HHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHH
Q 012767 239 DELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 239 ~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 318 (456)
++++++.++||+++|+||.++|+.||++|++|+|+|||+||+|||++|||||||++|+|+|+++||+||++++|+.|+.+
T Consensus 506 ~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~a 585 (755)
T TIGR01647 506 GEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDA 585 (755)
T ss_pred HHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHH
Confidence 78888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhhhHHHHHHH
Q 012767 319 VLISRAIFQRMRNYMVRGIDGLSSTEFI-QVLELNFLFTLDTVIAI 363 (456)
Q Consensus 319 i~~~R~i~~~i~~~~~y~~~~~~~~i~l-~~~~~~~~~pl~~~~~l 363 (456)
+++||++|+||++|+.|.+..++..++. .++.++..+|+++++++
T Consensus 586 i~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~~l~~~~il 631 (755)
T TIGR01647 586 ILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVV 631 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCcchhHHHHH
Confidence 9999999999999999998765544432 33333344678888877
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-64 Score=563.18 Aligned_cols=355 Identities=28% Similarity=0.453 Sum_probs=297.0
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhccc--CCCChHHHHHHHhhcCch--hhh
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQV--ENLDVIDAAIVGMLADPK--EAR 76 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~--~~~~pi~~ai~~~~~~~~--~~~ 76 (456)
++++|+||++|+||||||||||+|+|+|.+.+. ..+.+.++++.+++.++.. ...||+|.|++.++.... ..+
T Consensus 360 l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~ 436 (903)
T PRK15122 360 LNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKP 436 (903)
T ss_pred cchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhh
Confidence 579999999999999999999999999998542 2234456677777654322 234799999998875432 123
Q ss_pred hcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccC----------CchhhhHHHHHHHHHHHccCeeeE
Q 012767 77 ADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLA 146 (456)
Q Consensus 77 ~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~----------~~~~~~~~~~~i~~~~~~Glr~l~ 146 (456)
..++.++.+||++.+|+|++++++.+|+++.++||+|+.|+++|.. +++..+.+.+.+++++.+|+|+++
T Consensus 437 ~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvla 516 (903)
T PRK15122 437 AGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLL 516 (903)
T ss_pred hcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEE
Confidence 4678899999999999999988876788889999999999999962 112345567778899999999999
Q ss_pred EeeeecCCCCc-----CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCC
Q 012767 147 VAYQEVPEGSK-----ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS 221 (456)
Q Consensus 147 vA~~~~~~~~~-----~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~ 221 (456)
+||+.++..+. +..|++++|+|+++|+|||||+++++|+.|+++||+|+|+|||++.+|.++|+++||.. .
T Consensus 517 vA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~----~ 592 (903)
T PRK15122 517 VATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP----G 592 (903)
T ss_pred EEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC----C
Confidence 99998765331 23577899999999999999999999999999999999999999999999999999963 3
Q ss_pred ccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhh
Q 012767 222 SALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARS 301 (456)
Q Consensus 222 ~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~ 301 (456)
.++.|.+.+. +...++.+.+++.++|||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||++|+|+|++
T Consensus 593 ~vi~G~el~~-~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAke 671 (903)
T PRK15122 593 EPLLGTEIEA-MDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAKE 671 (903)
T ss_pred CccchHhhhh-CCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHHHHH
Confidence 4667766543 333456778888899999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-HhhhhhHHHHHHH
Q 012767 302 AADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV-LE-LNFLFTLDTVIAI 363 (456)
Q Consensus 302 aaDivl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~-~~-~~~~~pl~~~~~l 363 (456)
+||+||++++|+.|+.++++||++|+||++|+.|.+..++..++..+ .. +..++|+.++++|
T Consensus 672 aADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil 735 (903)
T PRK15122 672 SADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLL 735 (903)
T ss_pred hcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHH
Confidence 99999999999999999999999999999999999876554433322 22 2355799999998
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-64 Score=561.04 Aligned_cols=355 Identities=29% Similarity=0.466 Sum_probs=298.0
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccC--CCChHHHHHHHhhcCch--hhh
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVE--NLDVIDAAIVGMLADPK--EAR 76 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~--~~~pi~~ai~~~~~~~~--~~~ 76 (456)
++++|+||++|+||||||||||+|+|+|.+.. . ..+.+.++++.+++.++... ..||+|.|++.++.... ...
T Consensus 362 l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~-~--~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~ 438 (902)
T PRK10517 362 LDAIQNFGAMDILCTDKTGTLTQDKIVLENHT-D--ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLA 438 (902)
T ss_pred chhhhhccCCCEEEecCCCccccceEEEEEEe-c--CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhh
Confidence 57999999999999999999999999998753 1 22445677888777655432 35799999998765321 234
Q ss_pred hcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccC----------CchhhhHHHHHHHHHHHccCeeeE
Q 012767 77 ADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLA 146 (456)
Q Consensus 77 ~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~----------~~~~~~~~~~~i~~~~~~Glr~l~ 146 (456)
..|+.++.+||++.+|+|++++.+.++....++||+||.|+++|.. +++..+.+.+..++++++|+|+++
T Consensus 439 ~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvla 518 (902)
T PRK10517 439 SRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVA 518 (902)
T ss_pred hcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEE
Confidence 5678899999999999999988766677789999999999999963 112345567778899999999999
Q ss_pred EeeeecCCCCcC---CCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc
Q 012767 147 VAYQEVPEGSKE---SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSA 223 (456)
Q Consensus 147 vA~~~~~~~~~~---~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~ 223 (456)
+||++++..+.+ ..|++++|+|+++|+|||||+++++|+.|+++||+|+|+|||++.+|.++|+++||.. ..+
T Consensus 519 vA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~~v 594 (902)
T PRK10517 519 VATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----GEV 594 (902)
T ss_pred EEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----cCc
Confidence 999987643221 2367999999999999999999999999999999999999999999999999999952 346
Q ss_pred ccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcc
Q 012767 224 LSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAA 303 (456)
Q Consensus 224 l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aa 303 (456)
+.|.+.+ .+...++++.+++..+|||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||++|+|+|+++|
T Consensus 595 ~~G~el~-~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaA 673 (902)
T PRK10517 595 LIGSDIE-TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAA 673 (902)
T ss_pred eeHHHHH-hCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhC
Confidence 6776654 234445777888999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-hhhhhHHHHHHH
Q 012767 304 DIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV-LEL-NFLFTLDTVIAI 363 (456)
Q Consensus 304 Divl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~-~~~-~~~~pl~~~~~l 363 (456)
|+||++++|..|+.++++||++|+||++|+.|.+..++..++..+ +.+ ..++|+.++++|
T Consensus 674 DiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL 735 (902)
T PRK10517 674 DIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLL 735 (902)
T ss_pred CEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 999999999999999999999999999999999876665544443 222 345799999998
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-63 Score=553.91 Aligned_cols=355 Identities=27% Similarity=0.444 Sum_probs=296.3
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccC--CCChHHHHHHHhhcCc--hhhh
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVE--NLDVIDAAIVGMLADP--KEAR 76 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~--~~~pi~~ai~~~~~~~--~~~~ 76 (456)
++++|+||++|+||||||||||+|+|+|.+.+. ..+.+.++++.+++.++... ..||+|.|++.++.+. ...+
T Consensus 327 l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~ 403 (867)
T TIGR01524 327 LSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTA 403 (867)
T ss_pred chhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhHh
Confidence 579999999999999999999999999988531 23445677777777654422 2479999999887542 1234
Q ss_pred hcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccC----------CchhhhHHHHHHHHHHHccCeeeE
Q 012767 77 ADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLA 146 (456)
Q Consensus 77 ~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~----------~~~~~~~~~~~i~~~~~~Glr~l~ 146 (456)
..++.++.+||++.+|+|++++.+.++..+.++||+|+.++++|.. +++..+.+.+.+++++++|+|+++
T Consensus 404 ~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvla 483 (867)
T TIGR01524 404 SRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIA 483 (867)
T ss_pred hcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEE
Confidence 5678889999999999999988765556788999999999999962 122345677888999999999999
Q ss_pred EeeeecCCCCc---CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc
Q 012767 147 VAYQEVPEGSK---ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSA 223 (456)
Q Consensus 147 vA~~~~~~~~~---~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~ 223 (456)
+|+++++..+. +..|++++|+|+++|+|||||+++++|++|+++||+|+|+|||+..+|.++|+++||.+ ..+
T Consensus 484 vA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~~v 559 (867)
T TIGR01524 484 VATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----NDF 559 (867)
T ss_pred EEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----CCe
Confidence 99998765432 12477899999999999999999999999999999999999999999999999999963 245
Q ss_pred ccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcc
Q 012767 224 LSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAA 303 (456)
Q Consensus 224 l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aa 303 (456)
+.|.+.++ +...++.+.+++.++|||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||++|+|+|+++|
T Consensus 560 ~~g~~l~~-~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aA 638 (867)
T TIGR01524 560 LLGADIEE-LSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEAS 638 (867)
T ss_pred eecHhhhh-CCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhC
Confidence 66665532 23345667788889999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-hhhhhHHHHHHH
Q 012767 304 DIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV-LEL-NFLFTLDTVIAI 363 (456)
Q Consensus 304 Divl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~-~~~-~~~~pl~~~~~l 363 (456)
|+||++++|+.|+.++++||++|+||++|+.|.+..++..++..+ +.+ ..++|+.++++|
T Consensus 639 DiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil 700 (867)
T TIGR01524 639 DIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLL 700 (867)
T ss_pred CEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 999999999999999999999999999999999876555444332 222 345799999998
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-63 Score=563.30 Aligned_cols=371 Identities=27% Similarity=0.422 Sum_probs=296.3
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeec---c-----cCCC--------------------------------
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEI---F-----AGGV-------------------------------- 40 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~---~-----~~~~-------------------------------- 40 (456)
|+++|+||.+++||+|||||||+|+|+|.++++.. + ..++
T Consensus 350 L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (1053)
T TIGR01523 350 LDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEF 429 (1053)
T ss_pred chhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccc
Confidence 67999999999999999999999999999876531 0 0000
Q ss_pred -------C---------hHHHHHHHHHhccc------------CCCChHHHHHHHhhcCch----------h--------
Q 012767 41 -------D---------ADTVVLMAARASQV------------ENLDVIDAAIVGMLADPK----------E-------- 74 (456)
Q Consensus 41 -------~---------~~~il~~aa~~~~~------------~~~~pi~~ai~~~~~~~~----------~-------- 74 (456)
+ ...++..++.|+.. ...||.|.|++.++...+ .
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~ 509 (1053)
T TIGR01523 430 KDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNEND 509 (1053)
T ss_pred cccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhcccc
Confidence 0 01345555655421 124899999998753111 0
Q ss_pred -----------hhhcceEEEeecCCCCCceEEEEEEecCC-cEEEEEcCcHHHHHhhccC------------CchhhhHH
Q 012767 75 -----------ARADIQEVHFLPFDPTGKRTALTYIDSEG-KMHRVTKGSPEQILNLLHN------------KSKIGRKV 130 (456)
Q Consensus 75 -----------~~~~~~~~~~~pf~~~~k~~~v~~~~~~g-~~~~~~KGa~e~Il~~~~~------------~~~~~~~~ 130 (456)
.+..|+.++.+||+|.+|||++++++.++ ++++|+|||||.|+++|.. +++.++.+
T Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i 589 (1053)
T TIGR01523 510 QSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELI 589 (1053)
T ss_pred ccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHH
Confidence 02347789999999999999999886544 4788999999999999962 11235667
Q ss_pred HHHHHHHHHccCeeeEEeeeecCCCC------------cCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEc
Q 012767 131 NAVINKFAERGLRSLAVAYQEVPEGS------------KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMIT 198 (456)
Q Consensus 131 ~~~i~~~~~~Glr~l~vA~~~~~~~~------------~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miT 198 (456)
.+.+++|+++|+|||++||+.++..+ .+..|++|+|+|+++++||||++++++|+.|+++||+|+|+|
T Consensus 590 ~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiT 669 (1053)
T TIGR01523 590 IANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLT 669 (1053)
T ss_pred HHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEEC
Confidence 78899999999999999999886432 234578999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHhCCCCCC--------CCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEE
Q 012767 199 GDQLAIAKETGRRLGMGTNM--------YPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHIC 270 (456)
Q Consensus 199 GD~~~~a~~ia~~lGi~~~~--------~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v 270 (456)
||++.+|.++|+++||.+.. ....+++|.+.+. +...+++++++...+|||++|+||.++|+.+|++|++|
T Consensus 670 GD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~-l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~V 748 (1053)
T TIGR01523 670 GDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA-LSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFC 748 (1053)
T ss_pred CCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhh-cCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCee
Confidence 99999999999999996431 1234666665542 22334566777788999999999999999999999999
Q ss_pred EEecCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012767 271 GMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVL 349 (456)
Q Consensus 271 ~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~ 349 (456)
+|+|||+||+|||++|||||||| +|++.|+++||+++++++|+.|+.++.+||++|+||++++.|.+..++..++..+.
T Consensus 749 am~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~ 828 (1053)
T TIGR01523 749 AMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLII 828 (1053)
T ss_pred EEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 99999999999999999999998 89999999999999999999999999999999999999999999876655554443
Q ss_pred HHhh-------hhhHHHHHHH-HHhcccCcc
Q 012767 350 ELNF-------LFTLDTVIAI-LQTAFTSKK 372 (456)
Q Consensus 350 ~~~~-------~~pl~~~~~l-~~~~~~~~~ 372 (456)
..+. .+|++++++| +++.+...+
T Consensus 829 ~~~~~~~~g~~~~Pl~~~qiL~inli~d~~p 859 (1053)
T TIGR01523 829 GLAFRDENGKSVFPLSPVEILWCIMITSCFP 859 (1053)
T ss_pred HHHHhcccCCCcCchHHHHHHHHHHHHHHHH
Confidence 3222 3799999998 333333333
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-63 Score=554.54 Aligned_cols=360 Identities=25% Similarity=0.369 Sum_probs=293.9
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeeccc---CC----CC--hHHHHHHHHHhccc------------CCCC
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFA---GG----VD--ADTVVLMAARASQV------------ENLD 59 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~---~~----~~--~~~il~~aa~~~~~------------~~~~ 59 (456)
++++|+||++|+||||||||||+|+|+|.+++..... .+ .. ..+++..++.++.. ...|
T Consensus 367 l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~ 446 (941)
T TIGR01517 367 LAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGS 446 (941)
T ss_pred hHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCC
Confidence 5789999999999999999999999999987653210 00 01 12233333333221 1247
Q ss_pred hHHHHHHHhhcC----chhhhhcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCC-----c-----h
Q 012767 60 VIDAAIVGMLAD----PKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK-----S-----K 125 (456)
Q Consensus 60 pi~~ai~~~~~~----~~~~~~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~-----~-----~ 125 (456)
|+|.|++.++.. ....+..++.++.+||++.+|+|+++++..+++++.++||+||.|+++|..- . +
T Consensus 447 p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~ 526 (941)
T TIGR01517 447 KTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD 526 (941)
T ss_pred ccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH
Confidence 999999988642 2233456777889999999999999988766778899999999999999631 0 1
Q ss_pred hhhHHHHHHHHHHHccCeeeEEeeeecCCCCc---CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcH
Q 012767 126 IGRKVNAVINKFAERGLRSLAVAYQEVPEGSK---ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQL 202 (456)
Q Consensus 126 ~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~---~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~ 202 (456)
..+.+.+.+++++++|+|++++||+.++.++. +..|++|+|+|+++++|||||+++++|+.|+++||+|+|+|||++
T Consensus 527 ~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~ 606 (941)
T TIGR01517 527 DKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNI 606 (941)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCCh
Confidence 24567788899999999999999998864432 234789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhh
Q 012767 203 AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPA 282 (456)
Q Consensus 203 ~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~a 282 (456)
.+|.++|+++||.++. ..++.|.+.+. +...++++++.+..+|||++|+||.++|+.||++|++|+|+|||+||+||
T Consensus 607 ~tA~~iA~~~GI~~~~--~~vi~G~~~~~-l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapA 683 (941)
T TIGR01517 607 DTAKAIARNCGILTFG--GLAMEGKEFRR-LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPA 683 (941)
T ss_pred HHHHHHHHHcCCCCCC--ceEeeHHHhhh-CCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHH
Confidence 9999999999997532 34666665543 23345677788889999999999999999999999999999999999999
Q ss_pred hhhcCeeEEec-cccHHHhhcccEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-hhhhHHH
Q 012767 283 LKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLE-LN-FLFTLDT 359 (456)
Q Consensus 283 Lk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~-~~-~~~pl~~ 359 (456)
|++|||||||| +|+|+|+++||+||++++|+.|+.++.+||++|+||++++.|.+..+...+.+.+.. ++ ...|+++
T Consensus 684 Lk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~ 763 (941)
T TIGR01517 684 LKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTA 763 (941)
T ss_pred HHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 99999999999 999999999999999999999999999999999999999999998766665555432 22 4579999
Q ss_pred HHHH
Q 012767 360 VIAI 363 (456)
Q Consensus 360 ~~~l 363 (456)
++++
T Consensus 764 ~qil 767 (941)
T TIGR01517 764 VQLL 767 (941)
T ss_pred HHHH
Confidence 9998
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-61 Score=546.45 Aligned_cols=362 Identities=25% Similarity=0.385 Sum_probs=292.2
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecc--c-CC--------CCh-----HHHHHHHHHhccc---------
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIF--A-GG--------VDA-----DTVVLMAARASQV--------- 55 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~--~-~~--------~~~-----~~il~~aa~~~~~--------- 55 (456)
++++|+||++|+||||||||||+|+|+|.++++... . ++ .+. +.++.+++.|+..
T Consensus 335 ~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~ 414 (997)
T TIGR01106 335 LEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENV 414 (997)
T ss_pred cHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCC
Confidence 579999999999999999999999999998875210 0 00 111 2455666666421
Q ss_pred ------CCCChHHHHHHHhhc----CchhhhhcceEEEeecCCCCCceEEEEEEe--c-CCcEEEEEcCcHHHHHhhccC
Q 012767 56 ------ENLDVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYID--S-EGKMHRVTKGSPEQILNLLHN 122 (456)
Q Consensus 56 ------~~~~pi~~ai~~~~~----~~~~~~~~~~~~~~~pf~~~~k~~~v~~~~--~-~g~~~~~~KGa~e~Il~~~~~ 122 (456)
...||.|.|++.++. +....+..++.++.+||+|.+|+|++++.. . ++++++++|||||.|+++|+.
T Consensus 415 ~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~ 494 (997)
T TIGR01106 415 PILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSS 494 (997)
T ss_pred cccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhH
Confidence 124799999998764 233456678899999999999999887753 2 246788999999999999952
Q ss_pred ----------CchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCc--------C---CCCCCceEeEecccCCCCCcchH
Q 012767 123 ----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK--------E---SSGSPWQFIGLIPLFDPPIHDSA 181 (456)
Q Consensus 123 ----------~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~--------~---~~e~~~~~lG~i~l~d~~r~~~~ 181 (456)
+++..+.+.+.+++|+++|+||+++||+.++.++. + ..|++|+|+|+++++||||++++
T Consensus 495 ~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~ 574 (997)
T TIGR01106 495 ILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVP 574 (997)
T ss_pred HhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHH
Confidence 12345668888999999999999999998864321 1 12789999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC----------------------CccccCCchhhhhhcCChH
Q 012767 182 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALSGQDRDESIVALPVD 239 (456)
Q Consensus 182 ~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~----------------------~~~l~g~~~~~~~~~~~~~ 239 (456)
++|+.|+++||+|+|+|||+..+|.++|+++|+..+... ..++.|.+.+. +...+++
T Consensus 575 ~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~-l~~~el~ 653 (997)
T TIGR01106 575 DAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD-MTSEQLD 653 (997)
T ss_pred HHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-CCHHHHH
Confidence 999999999999999999999999999999999643211 13555555432 2223456
Q ss_pred HHHhhcc--cccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHH
Q 012767 240 ELIEKAD--GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 240 ~~~~~~~--v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~ 316 (456)
+++.++. +|||++|+||.++|+.+|+.|++|+|+|||+||+|||++|||||||| +|+++++++||+||++++|+.|+
T Consensus 654 ~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv 733 (997)
T TIGR01106 654 EILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIV 733 (997)
T ss_pred HHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHH
Confidence 6666654 99999999999999999999999999999999999999999999999 79999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhHHHHHHH
Q 012767 317 TAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN--FLFTLDTVIAI 363 (456)
Q Consensus 317 ~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~--~~~pl~~~~~l 363 (456)
.++.+||++|.|+++++.|.+..++..++..+...+ .+.|++++++|
T Consensus 734 ~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL 782 (997)
T TIGR01106 734 TGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITIL 782 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHH
Confidence 999999999999999999999876666555543333 45689999998
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-60 Score=530.10 Aligned_cols=370 Identities=28% Similarity=0.391 Sum_probs=293.3
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecc-----------cCCCC-------------------hHHHHHHHH
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIF-----------AGGVD-------------------ADTVVLMAA 50 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~-----------~~~~~-------------------~~~il~~aa 50 (456)
++++|+||++|+||||||||||+|+|+|.+++.... ..+++ .+.++..++
T Consensus 280 ~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 359 (917)
T TIGR01116 280 LPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAA 359 (917)
T ss_pred cHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHH
Confidence 578999999999999999999999999998764210 00010 123445555
Q ss_pred HhcccC------------CCChHHHHHHHhhcCch--------------------hhhhcceEEEeecCCCCCceEEEEE
Q 012767 51 RASQVE------------NLDVIDAAIVGMLADPK--------------------EARADIQEVHFLPFDPTGKRTALTY 98 (456)
Q Consensus 51 ~~~~~~------------~~~pi~~ai~~~~~~~~--------------------~~~~~~~~~~~~pf~~~~k~~~v~~ 98 (456)
.|+... ..||.|.|++.++.+.+ ..+..|+.++.+||+|.+|||++++
T Consensus 360 lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv 439 (917)
T TIGR01116 360 LCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLC 439 (917)
T ss_pred hcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEE
Confidence 555321 24899999998753211 1235577899999999999999988
Q ss_pred EecCCcEEEEEcCcHHHHHhhccC-----------CchhhhHHHHHHHHHHH-ccCeeeEEeeeecCCCC----------
Q 012767 99 IDSEGKMHRVTKGSPEQILNLLHN-----------KSKIGRKVNAVINKFAE-RGLRSLAVAYQEVPEGS---------- 156 (456)
Q Consensus 99 ~~~~g~~~~~~KGa~e~Il~~~~~-----------~~~~~~~~~~~i~~~~~-~Glr~l~vA~~~~~~~~---------- 156 (456)
++ +++++.|+|||||.|++.|+. +++..+.+.+.+++|++ +|+||+++||+.++.+.
T Consensus 440 ~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~ 518 (917)
T TIGR01116 440 KP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPAN 518 (917)
T ss_pred ee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchh
Confidence 75 467889999999999999962 12234567888999999 99999999999986421
Q ss_pred cCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--CccccCCchhhhhh
Q 012767 157 KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIV 234 (456)
Q Consensus 157 ~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~--~~~l~g~~~~~~~~ 234 (456)
.+..|++++|+|+++++||||++++++|+.|+++|++++|+|||+..+|.++|+++|+..+..+ ...+.|.+.+. +.
T Consensus 519 ~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~-~~ 597 (917)
T TIGR01116 519 FEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE-MG 597 (917)
T ss_pred hhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhh-CC
Confidence 1345889999999999999999999999999999999999999999999999999999753221 12445544322 22
Q ss_pred cCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchH
Q 012767 235 ALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV 314 (456)
Q Consensus 235 ~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~ 314 (456)
..+..+.+.+..+|||++|+||.++|+.+|+.|+.|+|+|||+||+|||++|||||+|++|++.++++||+++.+++|+.
T Consensus 598 ~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~ 677 (917)
T TIGR01116 598 PAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFAT 677 (917)
T ss_pred HHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHH
Confidence 22344556667899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-hhhhHHHHHHH-HHhcccCcc
Q 012767 315 IITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLE-LN-FLFTLDTVIAI-LQTAFTSKK 372 (456)
Q Consensus 315 i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~-~~-~~~pl~~~~~l-~~~~~~~~~ 372 (456)
|+.++.+||++|+|+++++.|.+..++..++..+.. ++ ...|+++++++ .+..+...+
T Consensus 678 i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp 738 (917)
T TIGR01116 678 IVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLP 738 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998655554444333 23 34799999987 333334333
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-59 Score=520.99 Aligned_cols=352 Identities=29% Similarity=0.436 Sum_probs=289.0
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeeccc----C--CC-------------------ChHHHHHHHHHhccc
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFA----G--GV-------------------DADTVVLMAARASQV 55 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~----~--~~-------------------~~~~il~~aa~~~~~ 55 (456)
++++|+||++|+||||||||||+|+|+|.+++..... . ++ ...+++..++.++..
T Consensus 315 ~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 394 (884)
T TIGR01522 315 LPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA 394 (884)
T ss_pred hHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCC
Confidence 4689999999999999999999999999987642100 0 00 013455555555432
Q ss_pred C--------CCChHHHHHHHhhcCc--hhhhhcceEEEeecCCCCCceEEEEEEec-CCcEEEEEcCcHHHHHhhccC--
Q 012767 56 E--------NLDVIDAAIVGMLADP--KEARADIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHN-- 122 (456)
Q Consensus 56 ~--------~~~pi~~ai~~~~~~~--~~~~~~~~~~~~~pf~~~~k~~~v~~~~~-~g~~~~~~KGa~e~Il~~~~~-- 122 (456)
. ..||+|.|++.++... ...+..++.++.+||++.+|+|+++++.. +++.+.++||+||.|+..|..
T Consensus 395 ~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~ 474 (884)
T TIGR01522 395 KFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQ 474 (884)
T ss_pred eecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhh
Confidence 1 1369999999886532 22345688899999999999999988753 567889999999999999962
Q ss_pred ---------CchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCe
Q 012767 123 ---------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLG 193 (456)
Q Consensus 123 ---------~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~ 193 (456)
+++.++.+.+.+++++++|+|++++||+++ +++|+|+|+++++|||||+++++|+.|+++|++
T Consensus 475 ~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~ 546 (884)
T TIGR01522 475 KKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVR 546 (884)
T ss_pred hcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCe
Confidence 122345677788899999999999999874 357899999999999999999999999999999
Q ss_pred EEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEe
Q 012767 194 VKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMI 273 (456)
Q Consensus 194 v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~i 273 (456)
++|+|||+..+|.++|+++||.... ...+.|.+.+. +...++++++.+..+|||++|+||..+|+.+|+.|+.|+|+
T Consensus 547 v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v~g~~l~~-~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mv 623 (884)
T TIGR01522 547 IIMITGDSQETAVSIARRLGMPSKT--SQSVSGEKLDA-MDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMT 623 (884)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCC--CceeEhHHhHh-CCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEE
Confidence 9999999999999999999997532 33456655432 33345667788889999999999999999999999999999
Q ss_pred cCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 012767 274 GNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV-LEL 351 (456)
Q Consensus 274 GDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~-~~~ 351 (456)
|||+||+|||++|||||+|| +++++++++||+++++++|+.|+.++++||++|+||++++.|.+..+...+.+.+ +.+
T Consensus 624 GDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~ 703 (884)
T TIGR01522 624 GDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATL 703 (884)
T ss_pred CCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99999999999999999998 7999999999999999999999999999999999999999999986655554432 233
Q ss_pred h-hhhhHHHHHHH
Q 012767 352 N-FLFTLDTVIAI 363 (456)
Q Consensus 352 ~-~~~pl~~~~~l 363 (456)
+ ...|++++++|
T Consensus 704 ~~~~~pl~~~qiL 716 (884)
T TIGR01522 704 MGFPNPLNAMQIL 716 (884)
T ss_pred HcCCCchhHHHHH
Confidence 3 45799999998
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-59 Score=533.00 Aligned_cols=360 Identities=22% Similarity=0.240 Sum_probs=281.4
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCC----------CChHHHHHHHHHhcc------cCCCChHHHH
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGG----------VDADTVVLMAARASQ------VENLDVIDAA 64 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~----------~~~~~il~~aa~~~~------~~~~~pi~~a 64 (456)
+.++|++|++|++|||||||||+|+|+|.+++....... .....+....+.|.. ....||+|.|
T Consensus 439 ~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~a 518 (1054)
T TIGR01657 439 PFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKK 518 (1054)
T ss_pred cccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHH
Confidence 468999999999999999999999999998654211000 011222333333332 1236899999
Q ss_pred HHHhhcCchhh-------------------hhcceEEEeecCCCCCceEEEEEEecC-CcEEEEEcCcHHHHHhhccCCc
Q 012767 65 IVGMLADPKEA-------------------RADIQEVHFLPFDPTGKRTALTYIDSE-GKMHRVTKGSPEQILNLLHNKS 124 (456)
Q Consensus 65 i~~~~~~~~~~-------------------~~~~~~~~~~pf~~~~k~~~v~~~~~~-g~~~~~~KGa~e~Il~~~~~~~ 124 (456)
++.+.+..... ...+++++.+||+|.+|||+++++..+ ++.+.++|||||.|+++|.. +
T Consensus 519 l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~ 597 (1054)
T TIGR01657 519 MFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-E 597 (1054)
T ss_pred HHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-c
Confidence 99876421100 145788999999999999999988643 56789999999999999974 3
Q ss_pred hhhhHHHHHHHHHHHccCeeeEEeeeecCCC--------CcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEE
Q 012767 125 KIGRKVNAVINKFAERGLRSLAVAYQEVPEG--------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKM 196 (456)
Q Consensus 125 ~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~--------~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~m 196 (456)
..++.+.+.+++|+++|+||+++||+.+++. +++..|++++|+|+++|+||+||+++++|+.|+++||+|+|
T Consensus 598 ~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~m 677 (1054)
T TIGR01657 598 TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVM 677 (1054)
T ss_pred CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEE
Confidence 4677888999999999999999999998742 23456899999999999999999999999999999999999
Q ss_pred EcCCcHHHHHHHHHHhCCCCCCCC---------------------------------------------------Ccccc
Q 012767 197 ITGDQLAIAKETGRRLGMGTNMYP---------------------------------------------------SSALS 225 (456)
Q Consensus 197 iTGD~~~~a~~ia~~lGi~~~~~~---------------------------------------------------~~~l~ 225 (456)
+|||++.||.++|+++||.++... ..+++
T Consensus 678 iTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it 757 (1054)
T TIGR01657 678 ITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMS 757 (1054)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEE
Confidence 999999999999999999643210 01222
Q ss_pred CCchhhh--hhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcc
Q 012767 226 GQDRDES--IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAA 303 (456)
Q Consensus 226 g~~~~~~--~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aa 303 (456)
|+..+.. .....+.+++.++.+|||++|+||.++|+.||+.|+.|+|||||+||+||||+|||||||+++ + |..||
T Consensus 758 G~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-d-as~AA 835 (1054)
T TIGR01657 758 GKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-E-ASVAA 835 (1054)
T ss_pred cHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-c-ceeec
Confidence 2222111 111235567788899999999999999999999999999999999999999999999999865 3 45899
Q ss_pred cEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 012767 304 DIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAI 363 (456)
Q Consensus 304 Divl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~~~~pl~~~~~l 363 (456)
|+++.+++|+.|+.+|++||+++.++++.+.|.+.+....++......+...|+..++++
T Consensus 836 ~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~Q~l 895 (1054)
T TIGR01657 836 PFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLIGSNLGDGQFL 895 (1054)
T ss_pred ccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcCccHHHH
Confidence 999999999999999999999999999888887765444433332222344677888866
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-57 Score=484.69 Aligned_cols=286 Identities=23% Similarity=0.356 Sum_probs=245.2
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcce
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ 80 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~ 80 (456)
++++|+||.+|+||||||||||+|++.+.++. . ..+.+.++++.+++.++..++ ||+++||+.++...+... ...
T Consensus 289 ~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~-~--~~~~~~~~ll~~a~~~~~~s~-~P~~~AIv~~a~~~~~~~-~~~ 363 (673)
T PRK14010 289 GRSVETCGDVNVLILDKTGTITYGNRMADAFI-P--VKSSSFERLVKAAYESSIADD-TPEGRSIVKLAYKQHIDL-PQE 363 (673)
T ss_pred cHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEE-e--CCCccHHHHHHHHHHhcCCCC-ChHHHHHHHHHHHcCCCc-hhh
Confidence 47899999999999999999999888876642 1 234566778888888776655 599999998765321110 011
Q ss_pred EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCC-chhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCC
Q 012767 81 EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK-SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKES 159 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~-~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~ 159 (456)
..+++||++.+|++++.+ +|+ .+.||+++.++++|... ...+..+.+.+++++++|+|+++++.+
T Consensus 364 ~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~~--------- 429 (673)
T PRK14010 364 VGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLED--------- 429 (673)
T ss_pred hcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEEC---------
Confidence 245689999999998764 343 56699999999999642 223345667778899999999998753
Q ss_pred CCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChH
Q 012767 160 SGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 239 (456)
Q Consensus 160 ~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 239 (456)
++++|++++.||+|||++++|++|+++||+++|+|||++.+|.++|+++||.
T Consensus 430 ----~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~------------------------ 481 (673)
T PRK14010 430 ----NEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD------------------------ 481 (673)
T ss_pred ----CEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc------------------------
Confidence 4999999999999999999999999999999999999999999999999995
Q ss_pred HHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHH
Q 012767 240 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 240 ~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
++|++++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||||++|+|+|+++||+|+++++|+.|+.++
T Consensus 482 ------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av 555 (673)
T PRK14010 482 ------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVV 555 (673)
T ss_pred ------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 012767 320 LISRAIFQRMRNYMVRGIDG 339 (456)
Q Consensus 320 ~~~R~i~~~i~~~~~y~~~~ 339 (456)
++||++|.|+++++.|.+..
T Consensus 556 ~~gR~i~~n~~~~~~f~~~~ 575 (673)
T PRK14010 556 LIGKQLLMTRGSLTTFSIAN 575 (673)
T ss_pred HHHHHHHHHHHHHHheeeec
Confidence 99999999999999998854
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-57 Score=512.52 Aligned_cols=340 Identities=21% Similarity=0.299 Sum_probs=270.2
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecc--cCCC-------------------------------C------
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIF--AGGV-------------------------------D------ 41 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~--~~~~-------------------------------~------ 41 (456)
++++|+||.+++||+|||||||+|+|++.++++... ..+. +
T Consensus 350 ~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (1057)
T TIGR01652 350 SNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDL 429 (1057)
T ss_pred CCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHh
Confidence 357899999999999999999999999999876311 0000 0
Q ss_pred ----------hHHHHHHHHHhccc-------C-------CCChHHHHHHHhhcCch------------------hhhhcc
Q 012767 42 ----------ADTVVLMAARASQV-------E-------NLDVIDAAIVGMLADPK------------------EARADI 79 (456)
Q Consensus 42 ----------~~~il~~aa~~~~~-------~-------~~~pi~~ai~~~~~~~~------------------~~~~~~ 79 (456)
..+++..++.|... . ..+|.|.|++.++...+ .....|
T Consensus 430 ~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 509 (1057)
T TIGR01652 430 LKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEY 509 (1057)
T ss_pred hhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEE
Confidence 02334444444321 1 24799999998754321 012457
Q ss_pred eEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccC-CchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCc-
Q 012767 80 QEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK- 157 (456)
Q Consensus 80 ~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~-~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~- 157 (456)
+.++.+||++.+|||++++++.+|++++++||||+.|+++|.. +++..+.+.+++++|+.+|+||+++|++.++++++
T Consensus 510 ~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~ 589 (1057)
T TIGR01652 510 EILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYE 589 (1057)
T ss_pred EEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHH
Confidence 8899999999999999999988888899999999999999974 34456778899999999999999999999875421
Q ss_pred ------------------------CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC
Q 012767 158 ------------------------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG 213 (456)
Q Consensus 158 ------------------------~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lG 213 (456)
+..|++++|+|+++++||||++++++|+.|+++||+|||+|||+.+||.++|++||
T Consensus 590 ~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ 669 (1057)
T TIGR01652 590 EWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCR 669 (1057)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhC
Confidence 34589999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC---------------------------------------ccccCCchhhhhhc---CChHHHHhhcc--ccc
Q 012767 214 MGTNMYPS---------------------------------------SALSGQDRDESIVA---LPVDELIEKAD--GFA 249 (456)
Q Consensus 214 i~~~~~~~---------------------------------------~~l~g~~~~~~~~~---~~~~~~~~~~~--v~a 249 (456)
|.++.... .++.|...+..... ..+.+++..+. +||
T Consensus 670 ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~a 749 (1057)
T TIGR01652 670 LLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICC 749 (1057)
T ss_pred CCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEe
Confidence 97643211 13344333222211 12334555555 999
Q ss_pred ccCchhHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCeeEEecc-ccHHHhhcccEEeeCCCchHHHHHH-HHHHHHH
Q 012767 250 GVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAVAD-ATDAARSAADIVLTEPGLNVIITAV-LISRAIF 326 (456)
Q Consensus 250 ~~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvGIa~~~-~~~~a~~aaDivl~~~~l~~i~~~i-~~~R~i~ 326 (456)
|++|+||.++|+.+|+. |++|+|+|||+||+|||++|||||++.+ ...+|+.+||+++.+ |..+..++ .+||++|
T Consensus 750 R~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~ 827 (1057)
T TIGR01652 750 RVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSY 827 (1057)
T ss_pred CCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHH
Confidence 99999999999999998 9999999999999999999999999853 333788999999975 99999988 7899999
Q ss_pred HHHHHHHHHHHHHHHH
Q 012767 327 QRMRNYMVRGIDGLSS 342 (456)
Q Consensus 327 ~~i~~~~~y~~~~~~~ 342 (456)
+|+++++.|.+.-++.
T Consensus 828 ~r~~~~i~~~~~kn~~ 843 (1057)
T TIGR01652 828 KRISKMILYFFYKNLI 843 (1057)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998865443
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-55 Score=473.35 Aligned_cols=285 Identities=26% Similarity=0.376 Sum_probs=244.7
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCc-h--hhhh
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADP-K--EARA 77 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~-~--~~~~ 77 (456)
+.++|+||++|+||||||||||+|+|.+.+++. ..+.+.++++.+++.++..++| |+++||+.++... + ..+.
T Consensus 289 ~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~s~h-P~~~AIv~~a~~~~~~~~~~~ 364 (679)
T PRK01122 289 GRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLADET-PEGRSIVVLAKQRFNLRERDL 364 (679)
T ss_pred chHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCCCCC-chHHHHHHHHHhhcCCCchhh
Confidence 478999999999999999999999999988642 2456778888888888887765 9999999876531 1 1112
Q ss_pred cceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCC-chhhhHHHHHHHHHHHccCeeeEEeeeecCCCC
Q 012767 78 DIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK-SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS 156 (456)
Q Consensus 78 ~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~-~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~ 156 (456)
.++..+++||++.++++++.+ +| ..+.||+++.++++|... ...++.+.+.+++++++|.|++++|++.
T Consensus 365 ~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~~~----- 434 (679)
T PRK01122 365 QSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAEDN----- 434 (679)
T ss_pred ccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEECC-----
Confidence 245678899999988887643 34 578899999999999642 2345677888899999999999999753
Q ss_pred cCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcC
Q 012767 157 KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVAL 236 (456)
Q Consensus 157 ~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~ 236 (456)
+++|+++++||+|||++++|++|+++||+++|+|||++.+|.++|+++||+
T Consensus 435 --------~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId--------------------- 485 (679)
T PRK01122 435 --------RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--------------------- 485 (679)
T ss_pred --------eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc---------------------
Confidence 999999999999999999999999999999999999999999999999995
Q ss_pred ChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHH
Q 012767 237 PVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 237 ~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~ 316 (456)
++||+++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||||++|+++|+++||+|++++||+.|+
T Consensus 486 ---------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv 556 (679)
T PRK01122 486 ---------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLI 556 (679)
T ss_pred ---------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 012767 317 TAVLISRAIFQRMRNYMVRGI 337 (456)
Q Consensus 317 ~~i~~~R~i~~~i~~~~~y~~ 337 (456)
.++++||++.-.--....|++
T Consensus 557 ~av~~GR~~~~tr~~~~~f~~ 577 (679)
T PRK01122 557 EVVEIGKQLLMTRGALTTFSI 577 (679)
T ss_pred HHHHHHHHHHhhhHhhhhhhH
Confidence 999999996633333334443
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-54 Score=490.42 Aligned_cols=334 Identities=21% Similarity=0.270 Sum_probs=264.6
Q ss_pred hHHHHhccccEEEcCcccccccCceEEEEEeeecccCC-----------------------------C------------
Q 012767 2 SAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGG-----------------------------V------------ 40 (456)
Q Consensus 2 ~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~-----------------------------~------------ 40 (456)
+..|+||+|++||+|||||||+|+|++.+|++.....+ .
T Consensus 445 nl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (1178)
T PLN03190 445 NINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGK 524 (1178)
T ss_pred cchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccc
Confidence 56899999999999999999999999999987311000 0
Q ss_pred C-h-----HHHHHHHHHhccc------------------CCCChHHHHHHHhhcCch----------------hhhhcce
Q 012767 41 D-A-----DTVVLMAARASQV------------------ENLDVIDAAIVGMLADPK----------------EARADIQ 80 (456)
Q Consensus 41 ~-~-----~~il~~aa~~~~~------------------~~~~pi~~ai~~~~~~~~----------------~~~~~~~ 80 (456)
+ . .+++...+.|... ...+|.|.||+.++...+ ..+..|+
T Consensus 525 ~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~ 604 (1178)
T PLN03190 525 DTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFN 604 (1178)
T ss_pred cchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecce
Confidence 0 0 1234444444321 112699999998764322 2356789
Q ss_pred EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCC--chhhhHHHHHHHHHHHccCeeeEEeeeecCCCCc-
Q 012767 81 EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK--SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK- 157 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~--~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~- 157 (456)
+++.+||+|.+|||++++++.+|+.++++||||+.|+++|... .+..+.+.+++++|+++|+|||++||+.++++++
T Consensus 605 il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~ 684 (1178)
T PLN03190 605 VLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFE 684 (1178)
T ss_pred eEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHh
Confidence 9999999999999999999878888999999999999999642 3456778899999999999999999999975422
Q ss_pred ------------------------CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC
Q 012767 158 ------------------------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG 213 (456)
Q Consensus 158 ------------------------~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lG 213 (456)
+.+|++++++|+++++||||++++++|+.|+++||+|||+|||+.++|.+||+.||
T Consensus 685 ~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~ 764 (1178)
T PLN03190 685 QWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSK 764 (1178)
T ss_pred hHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhC
Confidence 24589999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcc-----------------------------------------------ccCCchhhhhh---cCChHHHHh
Q 012767 214 MGTNMYPSSA-----------------------------------------------LSGQDRDESIV---ALPVDELIE 243 (456)
Q Consensus 214 i~~~~~~~~~-----------------------------------------------l~g~~~~~~~~---~~~~~~~~~ 243 (456)
|.++...... +.|...+.... ...+.+++.
T Consensus 765 Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~ 844 (1178)
T PLN03190 765 LLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLAS 844 (1178)
T ss_pred CCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHH
Confidence 9765322111 12221111111 012345555
Q ss_pred hcc--cccccCchhHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHHHHH
Q 012767 244 KAD--GFAGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 244 ~~~--v~a~~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
++. +|||++|.||.++|+.+|+. +++|+|||||+||++||++|||||++. ....+|..+||+.+.+ |..+..++
T Consensus 845 ~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~--Fr~L~rLL 922 (1178)
T PLN03190 845 KCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQ--FRFLVPLL 922 (1178)
T ss_pred hCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhh--hHHHHHHH
Confidence 555 79999999999999999997 589999999999999999999999875 3445888999999965 87888887
Q ss_pred H-HHHHHHHHHHHHHHHHH
Q 012767 320 L-ISRAIFQRMRNYMVRGI 337 (456)
Q Consensus 320 ~-~~R~i~~~i~~~~~y~~ 337 (456)
. +||+.|.|+.+.+.|.+
T Consensus 923 lvHGr~~y~R~s~~i~y~f 941 (1178)
T PLN03190 923 LVHGHWNYQRMGYMILYNF 941 (1178)
T ss_pred HHhCHHHHHHHHHHHHHHH
Confidence 7 99999999998887766
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-55 Score=460.48 Aligned_cols=362 Identities=26% Similarity=0.394 Sum_probs=296.2
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCC----------------CChHHHHHHHHHhcc----------
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGG----------------VDADTVVLMAARASQ---------- 54 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~----------------~~~~~il~~aa~~~~---------- 54 (456)
|.|+|+||..++||+|||||||+|+|+|...|.+..... ..-..+++.+..|++
T Consensus 357 LeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dv 436 (1019)
T KOG0203|consen 357 LEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDV 436 (1019)
T ss_pred eeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCC
Confidence 578999999999999999999999999998775321111 111245666666653
Q ss_pred -----cCCCChHHHHHHHhh----cCchhhhhcceEEEeecCCCCCceEEEEEEecC---CcEEEEEcCcHHHHHhhcc-
Q 012767 55 -----VENLDVIDAAIVGML----ADPKEARADIQEVHFLPFDPTGKRTALTYIDSE---GKMHRVTKGSPEQILNLLH- 121 (456)
Q Consensus 55 -----~~~~~pi~~ai~~~~----~~~~~~~~~~~~~~~~pf~~~~k~~~v~~~~~~---g~~~~~~KGa~e~Il~~~~- 121 (456)
..+.|+.+.||+.+. .+..+.|..++.+..+||||++|..-.+....+ .+..++.||+||.++++|+
T Consensus 437 Pv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CST 516 (1019)
T KOG0203|consen 437 PVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCST 516 (1019)
T ss_pred ceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccc
Confidence 234578899998764 344567888889999999999999876666433 5778899999999999996
Q ss_pred ---------CCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCC-----------cCCCCCCceEeEecccCCCCCcchH
Q 012767 122 ---------NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS-----------KESSGSPWQFIGLIPLFDPPIHDSA 181 (456)
Q Consensus 122 ---------~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~-----------~~~~e~~~~~lG~i~l~d~~r~~~~ 181 (456)
.++...+.++....++...|-||++++++.+|+.. ...+-.+|.|+|++++-||||..++
T Consensus 517 i~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP 596 (1019)
T KOG0203|consen 517 ILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVP 596 (1019)
T ss_pred eeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCc
Confidence 23445677888899999999999999999888543 2234578999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC------------C----------CccccCCchhhhhhcCChH
Q 012767 182 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY------------P----------SSALSGQDRDESIVALPVD 239 (456)
Q Consensus 182 ~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~------------~----------~~~l~g~~~~~~~~~~~~~ 239 (456)
+++..|+.+||+|+|+|||++.||+++|+.+||..+.. + ..++.|.+.. .+....++
T Consensus 597 ~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~-~~~~~qld 675 (1019)
T KOG0203|consen 597 DAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELP-DMSSEQLD 675 (1019)
T ss_pred hhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccccc-ccCHHHHH
Confidence 99999999999999999999999999999999764211 0 1233444332 23445577
Q ss_pred HHHhhcc--cccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHH
Q 012767 240 ELIEKAD--GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 240 ~~~~~~~--v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~ 316 (456)
+++..+. +|||.+|+||+.||+.+|++|.+|+.+|||+||+||||+|||||||| .|+|+++.|||+||+++||++|+
T Consensus 676 ~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIV 755 (1019)
T KOG0203|consen 676 ELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIV 755 (1019)
T ss_pred HHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhhe
Confidence 8877665 89999999999999999999999999999999999999999999999 89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhHHHHHHH
Q 012767 317 TAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN--FLFTLDTVIAI 363 (456)
Q Consensus 317 ~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~--~~~pl~~~~~l 363 (456)
.-+++||-+|+|+||.+.|.+..++.-+..++..++ ..+|+..+.+|
T Consensus 756 tGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL 804 (1019)
T KOG0203|consen 756 TGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTIL 804 (1019)
T ss_pred eecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhh
Confidence 999999999999999999999987766655554444 45677778877
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-52 Score=449.62 Aligned_cols=287 Identities=26% Similarity=0.345 Sum_probs=249.2
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhh--hhc
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEA--RAD 78 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~--~~~ 78 (456)
+.++|+||++|+||||||||||+|+|+|.+++. ..+.+.++++.+++.++..++| |+++||+.++...+.. ...
T Consensus 290 ~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~~s~h-P~a~Aiv~~a~~~~~~~~~~~ 365 (675)
T TIGR01497 290 GRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASLADDT-PEGKSIVILAKQLGIREDDVQ 365 (675)
T ss_pred cHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcCCCCC-cHHHHHHHHHHHcCCCccccc
Confidence 468999999999999999999999999988642 2456778899999888887665 9999999876532211 112
Q ss_pred ceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCC-chhhhHHHHHHHHHHHccCeeeEEeeeecCCCCc
Q 012767 79 IQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK-SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK 157 (456)
Q Consensus 79 ~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~-~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~ 157 (456)
++..++.||++.++++++.+. +| ..+.||+++.+++.|... ...+..+.+.+++++++|+|++++|++.
T Consensus 366 ~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~~~------ 435 (675)
T TIGR01497 366 SLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCEDN------ 435 (675)
T ss_pred cccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEECC------
Confidence 345678999999877765443 44 568899999999888532 2345667888899999999999999864
Q ss_pred CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCC
Q 012767 158 ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALP 237 (456)
Q Consensus 158 ~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~ 237 (456)
+++|++++.||+||+++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 436 -------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~---------------------- 486 (675)
T TIGR01497 436 -------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD---------------------- 486 (675)
T ss_pred -------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----------------------
Confidence 999999999999999999999999999999999999999999999999995
Q ss_pred hHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHH
Q 012767 238 VDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIIT 317 (456)
Q Consensus 238 ~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~ 317 (456)
+++++++|++|.++|+.+|++|+.|+|+|||.||+|||++|||||||+++++.++++||+++++++|+.|+.
T Consensus 487 --------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaadivLldd~~s~Iv~ 558 (675)
T TIGR01497 487 --------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIE 558 (675)
T ss_pred --------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEECCCCHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 012767 318 AVLISRAIFQRMRNYMVRGID 338 (456)
Q Consensus 318 ~i~~~R~i~~~i~~~~~y~~~ 338 (456)
++++||+++-+......|+++
T Consensus 559 av~~GR~~~~t~~~~~t~~~~ 579 (675)
T TIGR01497 559 VVHIGKQLLITRGALTTFSIA 579 (675)
T ss_pred HHHHHHHHHHHHHHHheeeec
Confidence 999999999888777777664
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-52 Score=449.63 Aligned_cols=314 Identities=30% Similarity=0.368 Sum_probs=262.0
Q ss_pred hHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcceE
Q 012767 2 SAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQE 81 (456)
Q Consensus 2 ~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~ 81 (456)
+++|+++++|+++||||||||+|+|.|.++. .. .+ ++++++.+|+..+..++| |+++||+.++.+.. ....+.
T Consensus 397 ~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~--~~-~~-~e~~~L~laAalE~~S~H-PiA~AIv~~a~~~~--~~~~~~ 469 (713)
T COG2217 397 EALERLAKVDTVVFDKTGTLTEGKPEVTDVV--AL-DG-DEDELLALAAALEQHSEH-PLAKAIVKAAAERG--LPDVED 469 (713)
T ss_pred HHHHhhccCCEEEEeCCCCCcCCceEEEEEe--cC-CC-CHHHHHHHHHHHHhcCCC-hHHHHHHHHHHhcC--CCCccc
Confidence 4799999999999999999999999999854 22 23 889999999999999887 99999998765432 111122
Q ss_pred EEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCC
Q 012767 82 VHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSG 161 (456)
Q Consensus 82 ~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e 161 (456)
++.+|.. ...+ ..+| ..+..|++..+.+.-. +... .....+.+.++|.+++.++.++
T Consensus 470 ~~~i~G~---Gv~~----~v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg---------- 526 (713)
T COG2217 470 FEEIPGR---GVEA----EVDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG---------- 526 (713)
T ss_pred eeeeccC---cEEE----EECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC----------
Confidence 3333321 1111 1255 4566799998865321 1222 5566788999999999999976
Q ss_pred CCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHH
Q 012767 162 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 241 (456)
Q Consensus 162 ~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~ 241 (456)
+++|++++.|++||+++++|+.|++.|++++|+|||+..+|.++|+++||+
T Consensus 527 ---~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId-------------------------- 577 (713)
T COG2217 527 ---KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID-------------------------- 577 (713)
T ss_pred ---EEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH--------------------------
Confidence 999999999999999999999999999999999999999999999999995
Q ss_pred HhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 242 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 242 ~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
++++++.|++|.++|+.||++|++|+|||||+||+|||++||||||||.|+|+|+++||++|+.+++..++.+|..
T Consensus 578 ----~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~l 653 (713)
T COG2217 578 ----EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDL 653 (713)
T ss_pred ----hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcccCccccchHHHHHHH
Q 012767 322 SRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERELLW 383 (456)
Q Consensus 322 ~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 383 (456)
||+++++||+|++|++.++...+.+.++.+ +++..-.+.|.+++..+..+++|...|
T Consensus 654 sr~t~~~IkqNl~~A~~yn~~~iplA~~g~-----l~p~~A~~am~~SSv~VvlNaLRL~~~ 710 (713)
T COG2217 654 SRATRRIIKQNLFWAFGYNAIAIPLAAGGL-----LTPWIAALAMSGSSVLVVLNALRLLRS 710 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cCHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 999999999999999988777776665441 123333378889999998888888765
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-50 Score=429.66 Aligned_cols=341 Identities=25% Similarity=0.264 Sum_probs=279.8
Q ss_pred hHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcceE
Q 012767 2 SAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQE 81 (456)
Q Consensus 2 ~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~ 81 (456)
+++|.+.++++++||||||||+|++.|.++.+ .....+..+++.+++..+..+.| |+.+||+.|+.+..........
T Consensus 574 e~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~SeH-Pig~AIv~yak~~~~~~~~~~~ 650 (951)
T KOG0207|consen 574 EALEKAHKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESGSEH-PIGKAIVDYAKEKLVEPNPEGV 650 (951)
T ss_pred HHHHHHhcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcCCcC-chHHHHHHHHHhcccccCcccc
Confidence 57999999999999999999999999998653 33337788999999988888776 9999999998754421111112
Q ss_pred EEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCC
Q 012767 82 VHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSG 161 (456)
Q Consensus 82 ~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e 161 (456)
+.+-.|....+...+. .+|+. ++.|+.+++...- ....+.++..+++-...|.++.++++++
T Consensus 651 ~~~~~~pg~g~~~~~~---~~~~~--i~iGN~~~~~r~~---~~~~~~i~~~~~~~e~~g~tvv~v~vn~---------- 712 (951)
T KOG0207|consen 651 LSFEYFPGEGIYVTVT---VDGNE--VLIGNKEWMSRNG---CSIPDDILDALTESERKGQTVVYVAVNG---------- 712 (951)
T ss_pred ceeecccCCCcccceE---EeeeE--EeechHHHHHhcC---CCCchhHHHhhhhHhhcCceEEEEEECC----------
Confidence 2222232222221111 23433 7789999986532 2345567778888899999999999987
Q ss_pred CCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHH
Q 012767 162 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 241 (456)
Q Consensus 162 ~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~ 241 (456)
+++|++.++|++|||+..+|..||+.|++++|+||||..+|..+|+++|+.
T Consensus 713 ---~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~-------------------------- 763 (951)
T KOG0207|consen 713 ---QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID-------------------------- 763 (951)
T ss_pred ---EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc--------------------------
Confidence 999999999999999999999999999999999999999999999999975
Q ss_pred HhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 242 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 242 ~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
++||++.|+||.++|+.+|+.++.|+|+|||+||+|||.+|||||+|+.+++.|.++|||||+.+++..++.+|.+
T Consensus 764 ----~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~L 839 (951)
T KOG0207|consen 764 ----NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDL 839 (951)
T ss_pred ----eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHhcccCccccchHHHHHHHHHhhhhhhcCCCC
Q 012767 322 SRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFL-FTLDTVIAILQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 396 (456)
Q Consensus 322 ~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~~~-~pl~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (456)
||+++.|+|.|+.|++.++..++...++.|+.+ +-|.+..--+.|++++.+++-.++.++.|..++-.-+..+.+
T Consensus 840 Srkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~~~~~~~~e~ 915 (951)
T KOG0207|consen 840 SRKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKRYKKPTINKLYRYEA 915 (951)
T ss_pred HHHHHhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhHHHhhhHHHHhhccccccccceeccc
Confidence 999999999999999999999888777775522 223333333899999999999888888888876433333333
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-50 Score=439.92 Aligned_cols=334 Identities=21% Similarity=0.259 Sum_probs=262.8
Q ss_pred HHHHhccccEEEcCcccccccCceEEEEEeeecccCCCC-----------------------------------------
Q 012767 3 AIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD----------------------------------------- 41 (456)
Q Consensus 3 aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~----------------------------------------- 41 (456)
--|+||++++|++|||||||+|.|++.+|.|....++..
T Consensus 380 l~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 459 (1151)
T KOG0206|consen 380 LNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQ 459 (1151)
T ss_pred chhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccC
Confidence 359999999999999999999999999999853222111
Q ss_pred ---hHHHHHHHHHhcc-------------cCCCChHHHHHHHhhcCchh----------------hhhcceEEEeecCCC
Q 012767 42 ---ADTVVLMAARASQ-------------VENLDVIDAAIVGMLADPKE----------------ARADIQEVHFLPFDP 89 (456)
Q Consensus 42 ---~~~il~~aa~~~~-------------~~~~~pi~~ai~~~~~~~~~----------------~~~~~~~~~~~pf~~ 89 (456)
..+.....+.|.. .....|.+.|++..+.+.+. ....|++++.++|+|
T Consensus 460 ~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S 539 (1151)
T KOG0206|consen 460 AEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNS 539 (1151)
T ss_pred cchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEecccc
Confidence 0122333333321 11235889999876543211 145789999999999
Q ss_pred CCceEEEEEEecCCcEEEEEcCcHHHHHhhcc-CCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCc-----------
Q 012767 90 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLH-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK----------- 157 (456)
Q Consensus 90 ~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~-~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~----------- 157 (456)
.||||||++++++|+..++||||+..|.+++. +.....++..+++++|+.+|+|+||+||++++++++
T Consensus 540 ~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ 619 (1151)
T KOG0206|consen 540 TRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAK 619 (1151)
T ss_pred ccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 455677888899999999999999999999987653
Q ss_pred --------------CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc
Q 012767 158 --------------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSA 223 (456)
Q Consensus 158 --------------~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~ 223 (456)
+.+|+++.++|..++||+++++++++|+.|+++|||+||+|||..+||..||..|++..+.+...+
T Consensus 620 ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~ 699 (1151)
T KOG0206|consen 620 TSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLII 699 (1151)
T ss_pred hhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEE
Confidence 346899999999999999999999999999999999999999999999999999998876443222
Q ss_pred ccCCc---------------------------------------------hhhhhhcC---ChHHHHh--hcccccccCc
Q 012767 224 LSGQD---------------------------------------------RDESIVAL---PVDELIE--KADGFAGVFP 253 (456)
Q Consensus 224 l~g~~---------------------------------------------~~~~~~~~---~~~~~~~--~~~v~a~~~P 253 (456)
+.... ....+... .+-++.. ++.+|||++|
T Consensus 700 i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sP 779 (1151)
T KOG0206|consen 700 INTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSP 779 (1151)
T ss_pred EecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCH
Confidence 22111 10000000 0112222 3458999999
Q ss_pred hhHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHHHHHH-HHHHHHHHHH
Q 012767 254 EHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVL-ISRAIFQRMR 330 (456)
Q Consensus 254 ~~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~-~~R~i~~~i~ 330 (456)
.||+.+|+..++. +.++++||||+||++|++.|||||+++ ....+|..+||+.+.+ |.-+..++. +||+.|.|+.
T Consensus 780 lQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a 857 (1151)
T KOG0206|consen 780 LQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLA 857 (1151)
T ss_pred HHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHH
Confidence 9999999999754 889999999999999999999999997 6778899999999977 444444443 8999999999
Q ss_pred HHHHHHHH
Q 012767 331 NYMVRGID 338 (456)
Q Consensus 331 ~~~~y~~~ 338 (456)
+.++|.+.
T Consensus 858 ~~ilyfFY 865 (1151)
T KOG0206|consen 858 KMILYFFY 865 (1151)
T ss_pred HHHHHHHH
Confidence 88888764
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-46 Score=409.63 Aligned_cols=311 Identities=26% Similarity=0.314 Sum_probs=250.0
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcce
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ 80 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~ 80 (456)
.+++|+|+++|++|||||||||+|+|+|.++.. ..+.++++++.+++..+..++| |+++||+.++.+.+ +
T Consensus 427 ~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~s~h-Pia~Ai~~~a~~~~-----~- 496 (741)
T PRK11033 427 GAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQGSTH-PLAQAIVREAQVRG-----L- 496 (741)
T ss_pred cHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcCCCC-HHHHHHHHHHHhcC-----C-
Confidence 368999999999999999999999999988542 2356788899999888877655 99999998764321 1
Q ss_pred EEEeecCCCCCceEEEE-EE-ecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcC
Q 012767 81 EVHFLPFDPTGKRTALT-YI-DSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKE 158 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~-~~-~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~ 158 (456)
.+||.+..+.+.-. ++ ..+|+. +..|+++.+.+ +.+.+...++++..+|+|+++++++.
T Consensus 497 ---~~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~------- 557 (741)
T PRK11033 497 ---AIPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND------- 557 (741)
T ss_pred ---CCCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------
Confidence 14665555544211 22 135543 44699988754 12345556778999999999999865
Q ss_pred CCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCCh
Q 012767 159 SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 238 (456)
Q Consensus 159 ~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~ 238 (456)
+++|+++|+|++|||++++|++|++.|++++|+|||+..+|..+++++||.
T Consensus 558 ------~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~----------------------- 608 (741)
T PRK11033 558 ------DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID----------------------- 608 (741)
T ss_pred ------EEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-----------------------
Confidence 999999999999999999999999999999999999999999999999994
Q ss_pred HHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHH
Q 012767 239 DELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 239 ~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 318 (456)
.++++.|++|..+|+.+|+. +.|+|+|||+||+|||++|||||+|+++++.++++||+++..+++..++.+
T Consensus 609 --------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~ 679 (741)
T PRK11033 609 --------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQM 679 (741)
T ss_pred --------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHH
Confidence 36789999999999999965 589999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcccCccccchHHHHHHH
Q 012767 319 VLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERELLW 383 (456)
Q Consensus 319 i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 383 (456)
+.+||+++.||++|+.|++.++...+.+.+.. ++|+ ..-.+.+..++..+..++.|...|
T Consensus 680 i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g---~~~~--~~a~~~~~~ss~~v~~Nslrl~~~ 739 (741)
T PRK11033 680 IELSRATHANIRQNITIALGLKAIFLVTTLLG---ITGL--WLAVLADSGATALVTANALRLLRK 739 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhHH--HHHHHHHcChHHHHHHHHHhhccc
Confidence 99999999999999999887765554443321 2221 112256666777777777766554
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-46 Score=394.47 Aligned_cols=259 Identities=25% Similarity=0.368 Sum_probs=215.0
Q ss_pred cceEEEeecCCCCCceEEEEEEec-CCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCC-
Q 012767 78 DIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG- 155 (456)
Q Consensus 78 ~~~~~~~~pf~~~~k~~~v~~~~~-~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~- 155 (456)
.+.+++.+||+|.-+||+|++.++ +.+.+.|+|||||.|.+.|. .+.++..+.+.++.|+.+|+|++++|.+.++..
T Consensus 600 ~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~-p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~ 678 (1140)
T KOG0208|consen 600 EISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICK-PETVPADYQEVLKEYTHQGFRVIALASKELETST 678 (1140)
T ss_pred ceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcC-cccCCccHHHHHHHHHhCCeEEEEEecCccCcch
Confidence 467899999999999999999874 46789999999999999995 456889999999999999999999999999865
Q ss_pred -------CcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc-----
Q 012767 156 -------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSA----- 223 (456)
Q Consensus 156 -------~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~----- 223 (456)
+++..|++++|+|++.|++++|+.++.+|++|.+++|+++|+||||..||..+|++|||........+
T Consensus 679 ~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~ 758 (1140)
T KOG0208|consen 679 LQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEP 758 (1140)
T ss_pred HHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccC
Confidence 36778999999999999999999999999999999999999999999999999999999763211000
Q ss_pred -------------------c-----------------------------cCCchhhhh--hcCChHHHHhhcccccccCc
Q 012767 224 -------------------L-----------------------------SGQDRDESI--VALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 224 -------------------l-----------------------------~g~~~~~~~--~~~~~~~~~~~~~v~a~~~P 253 (456)
. .|...+-.. ...-++.++.+..+|||++|
T Consensus 759 ~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP 838 (1140)
T KOG0208|consen 759 PEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSP 838 (1140)
T ss_pred CccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCc
Confidence 0 000000000 00013456678889999999
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHHHHH----HHHHH
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRA----IFQRM 329 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~----i~~~i 329 (456)
.||.++|+.||+-|+.|+|||||+||+.|||+||+||+++++ .|.-||.+.-.-++.+.++..|++||+ .|..+
T Consensus 839 ~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSea--EASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~F 916 (1140)
T KOG0208|consen 839 DQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEA--EASVAAPFTSKTPSISCVPDVIREGRAALVTSFACF 916 (1140)
T ss_pred hhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhh--hHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHH
Confidence 999999999999999999999999999999999999999753 467788888777899999999999998 35555
Q ss_pred HHHHHHHHHH
Q 012767 330 RNYMVRGIDG 339 (456)
Q Consensus 330 ~~~~~y~~~~ 339 (456)
|-...|+++.
T Consensus 917 kYMalYs~iq 926 (1140)
T KOG0208|consen 917 KYMALYSAIQ 926 (1140)
T ss_pred HHHHHHHHHH
Confidence 5555666544
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=383.67 Aligned_cols=261 Identities=35% Similarity=0.526 Sum_probs=226.8
Q ss_pred hHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcceE
Q 012767 2 SAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQE 81 (456)
Q Consensus 2 ~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~ 81 (456)
+++|+||++|++|||||||||+|+|+|.++++. . + +.. +.||++.|++.++... .
T Consensus 222 ~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~--~-~-------------~~~-s~hp~~~ai~~~~~~~--------~ 276 (499)
T TIGR01494 222 NALEELGKVDYICSDKTGTLTKNEMSFKKVSVL--G-G-------------EYL-SGHPDERALVKSAKWK--------I 276 (499)
T ss_pred hhhhhccCCcEEEeeCCCccccCceEEEEEEec--C-C-------------CcC-CCChHHHHHHHHhhhc--------C
Confidence 689999999999999999999999999987531 1 1 122 3469999999877531 2
Q ss_pred EEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCC
Q 012767 82 VHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSG 161 (456)
Q Consensus 82 ~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e 161 (456)
++..||++..+++++++.+.++ .++||+++.+.+.|.. +.+..+++..+|+|++++|++.
T Consensus 277 ~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~---------- 336 (499)
T TIGR01494 277 LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE---------- 336 (499)
T ss_pred cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC----------
Confidence 3567999999999888765322 4789999999998742 2334556889999999999876
Q ss_pred CCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHH
Q 012767 162 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 241 (456)
Q Consensus 162 ~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~ 241 (456)
+++|++.++|++|++++++|+.|+++|++++|+|||+..+|..+|+++||
T Consensus 337 ---~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi--------------------------- 386 (499)
T TIGR01494 337 ---TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI--------------------------- 386 (499)
T ss_pred ---eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------
Confidence 89999999999999999999999999999999999999999999999987
Q ss_pred HhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 242 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 242 ~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
+++++|++|.++|+.+|+.|+.|+|+|||.||+|||+.|||||+|+ ++++||++++++++..++.++.+
T Consensus 387 ------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~ 455 (499)
T TIGR01494 387 ------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKE 455 (499)
T ss_pred ------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999997 68999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012767 322 SRAIFQRMRNYMVRGIDGLSSTEFIQV 348 (456)
Q Consensus 322 ~R~i~~~i~~~~~y~~~~~~~~i~l~~ 348 (456)
||++++++++++.|++.++...+.+.+
T Consensus 456 ~r~~~~~i~~~~~~~~~~n~~~~~~a~ 482 (499)
T TIGR01494 456 GRKTFSTIKSNIFWAIAYNLILIPLAA 482 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998876665554443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=385.03 Aligned_cols=329 Identities=23% Similarity=0.277 Sum_probs=249.2
Q ss_pred HHHHhccccEEEcCcccccccCceEEEEEeeecccCCCC-hHHHH---------------------------------HH
Q 012767 3 AIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD-ADTVV---------------------------------LM 48 (456)
Q Consensus 3 aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~-~~~il---------------------------------~~ 48 (456)
.-|+||+|.++.+|||||||+|.|.++|+++.....+.+ -+++- ..
T Consensus 400 IPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~a 479 (1051)
T KOG0210|consen 400 IPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLA 479 (1051)
T ss_pred ChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHH
Confidence 359999999999999999999999999987643322211 11111 11
Q ss_pred HHHhccc----CC--------CChHHHHHHHhh-----------------cCchhhhhcceEEEeecCCCCCceEEEEEE
Q 012767 49 AARASQV----EN--------LDVIDAAIVGML-----------------ADPKEARADIQEVHFLPFDPTGKRTALTYI 99 (456)
Q Consensus 49 aa~~~~~----~~--------~~pi~~ai~~~~-----------------~~~~~~~~~~~~~~~~pf~~~~k~~~v~~~ 99 (456)
.+.|.+. ++ ..|-+-||+..- .++.....+|+++..+||++..|||+++++
T Consensus 480 lalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr 559 (1051)
T KOG0210|consen 480 LALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVR 559 (1051)
T ss_pred HHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEe
Confidence 1222111 00 123444443221 012222357999999999999999999999
Q ss_pred ec-CCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcC--------------------
Q 012767 100 DS-EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKE-------------------- 158 (456)
Q Consensus 100 ~~-~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~-------------------- 158 (456)
+. .|+...|.|||+.+|..... ..+++++...+|+++|+|+|.+|.+.+++++++
T Consensus 560 ~e~~~evtfylKGAD~VMs~iVq----~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~m 635 (1051)
T KOG0210|consen 560 DETTEEVTFYLKGADVVMSGIVQ----YNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKM 635 (1051)
T ss_pred cCCCceEEEEEecchHHHhcccc----cchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHH
Confidence 85 68899999999999877653 345777888999999999999999999876422
Q ss_pred ------CCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC------------
Q 012767 159 ------SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP------------ 220 (456)
Q Consensus 159 ------~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~------------ 220 (456)
..|.+++++|+.+.+|+++++++.+++.|+++||+|||+|||..+||..+|+..++......
T Consensus 636 a~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~d 715 (1051)
T KOG0210|consen 636 ANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGD 715 (1051)
T ss_pred HHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchH
Confidence 34889999999999999999999999999999999999999999999999999998753221
Q ss_pred --------------CccccCCchhhhhhc--CChHHHHh--hcccccccCchhHHHHHHHHhhc-CCEEEEecCCCCchh
Q 012767 221 --------------SSALSGQDRDESIVA--LPVDELIE--KADGFAGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAP 281 (456)
Q Consensus 221 --------------~~~l~g~~~~~~~~~--~~~~~~~~--~~~v~a~~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~ 281 (456)
..++.|+...--+.. .++-++.. .+.++|||+|.||+++++.+|++ |..|++||||-||+.
T Consensus 716 ah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVs 795 (1051)
T KOG0210|consen 716 AHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVS 795 (1051)
T ss_pred HHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccch
Confidence 123333332221111 11223322 34589999999999999999987 889999999999999
Q ss_pred hhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHHHHHH-HHHHHHHHHHHHHHHHH
Q 012767 282 ALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVL-ISRAIFQRMRNYMVRGI 337 (456)
Q Consensus 282 aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~-~~R~i~~~i~~~~~y~~ 337 (456)
|+++||+||++. ....+|.-|||+.+++ |+.+-.++. +||..|+|-.+...|-+
T Consensus 796 MIq~A~~GiGI~gkEGkQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfVi 851 (1051)
T KOG0210|consen 796 MIQAADVGIGIVGKEGKQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVI 851 (1051)
T ss_pred heeecccceeeecccccccchhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHH
Confidence 999999999985 7788999999999977 888888777 89999999876655544
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-43 Score=390.76 Aligned_cols=321 Identities=27% Similarity=0.321 Sum_probs=263.1
Q ss_pred hHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcceE
Q 012767 2 SAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQE 81 (456)
Q Consensus 2 ~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~ 81 (456)
+++|+|+++|++|||||||||+|+|+|.+... ..+.++++++.+++.++..++| |+++||+.++.+.. ....
T Consensus 509 ~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s~h-p~a~Ai~~~~~~~~--~~~~-- 580 (834)
T PRK10671 509 DALQRASTLDTLVFDKTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGSSH-PLARAILDKAGDMT--LPQV-- 580 (834)
T ss_pred HHHHhhcCCCEEEEcCCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHhhCC--CCCc--
Confidence 68999999999999999999999999987532 2356778889999888887776 99999998764211 0111
Q ss_pred EEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCC
Q 012767 82 VHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSG 161 (456)
Q Consensus 82 ~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e 161 (456)
.+|....+.. +... .+|. .+.+|+++++.+... ..+.+...+++++++|.++++++++.
T Consensus 581 ---~~~~~~~g~G-v~~~-~~g~--~~~~G~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~v~va~~~---------- 639 (834)
T PRK10671 581 ---NGFRTLRGLG-VSGE-AEGH--ALLLGNQALLNEQQV----DTKALEAEITAQASQGATPVLLAVDG---------- 639 (834)
T ss_pred ---ccceEecceE-EEEE-ECCE--EEEEeCHHHHHHcCC----ChHHHHHHHHHHHhCCCeEEEEEECC----------
Confidence 1222222111 1111 2453 466799998754221 12345666778899999999999875
Q ss_pred CCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHH
Q 012767 162 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 241 (456)
Q Consensus 162 ~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~ 241 (456)
.++|++.+.|++||+++++|++|++.|++++|+|||+..++..+++++||.
T Consensus 640 ---~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~-------------------------- 690 (834)
T PRK10671 640 ---KAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID-------------------------- 690 (834)
T ss_pred ---EEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC--------------------------
Confidence 899999999999999999999999999999999999999999999999995
Q ss_pred HhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 242 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 242 ~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
++|+++.|++|.++++.++.+++.|+|+|||.||++|++.||+||+|+++++.++++||++++.+++..|+.++++
T Consensus 691 ----~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l 766 (834)
T PRK10671 691 ----EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAI 766 (834)
T ss_pred ----EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHH
Confidence 3688999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHhcccCccccchHHHHHHHH
Q 012767 322 SRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFL--FTLDTVIAILQTAFTSKKDFGKEERELLWA 384 (456)
Q Consensus 322 ~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~~~--~pl~~~~~l~~~~~~~~~~~~~~~~~~~~~ 384 (456)
||+++.+|++|+.|++.++..++.+.++.+... +.++|+.-...|.+|+..+..++.|...|.
T Consensus 767 ~r~~~~~i~~Nl~~a~~yn~~~i~~a~g~~~p~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~~~ 831 (834)
T PRK10671 767 SRATLRNMKQNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLLRFK 831 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhhcccCHHHHHHHhcccceeehhhhHHhcCCC
Confidence 999999999999999998888887776554322 235666666899999999999988876443
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=361.24 Aligned_cols=290 Identities=29% Similarity=0.383 Sum_probs=233.5
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCC--hHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhc
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD--ADTVVLMAARASQVENLDVIDAAIVGMLADPKEARAD 78 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~--~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~ 78 (456)
++++|+|+++|++|||||||||+|+|+|.++.. . .+.+ .++++.+++.++..++| |++.||+.++...+.....
T Consensus 237 ~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~--~-~~~~~~~~~~l~~a~~~e~~~~h-p~~~Ai~~~~~~~~~~~~~ 312 (556)
T TIGR01525 237 GDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEP--L-DDASISEEELLALAAALEQSSSH-PLARAIVRYAKKRGLELPK 312 (556)
T ss_pred chHHHHhhcCCEEEEeCCCCCcCCceEEEEEEe--c-CCCCccHHHHHHHHHHHhccCCC-hHHHHHHHHHHhcCCCccc
Confidence 468999999999999999999999999988542 1 2333 67888888888877665 9999999887532211110
Q ss_pred ce-EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCc
Q 012767 79 IQ-EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK 157 (456)
Q Consensus 79 ~~-~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~ 157 (456)
+ ....+| .+..... .+|. ..+..|+++++ + +. ..+. ......++++.++|+|+++++++.
T Consensus 313 -~~~~~~~~----~~gi~~~---~~g~-~~~~lg~~~~~-~-~~-~~~~-~~~~~~~~~~~~~g~~~~~v~~~~------ 373 (556)
T TIGR01525 313 -QEDVEEVP----GKGVEAT---VDGQ-EEVRIGNPRLL-E-LA-AEPI-SASPDLLNEGESQGKTVVFVAVDG------ 373 (556)
T ss_pred -ccCeeEec----CCeEEEE---ECCe-eEEEEecHHHH-h-hc-CCCc-hhhHHHHHHHhhCCcEEEEEEECC------
Confidence 1 111221 1111111 2342 34567999877 2 11 1111 223455677889999999999865
Q ss_pred CCCCCCceEeEecccCCCCCcchHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcC
Q 012767 158 ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLG-LGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVAL 236 (456)
Q Consensus 158 ~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~G-i~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~ 236 (456)
+++|.+.++|++||+++++|+.|++.| ++++|+|||+..++..+++++|+.
T Consensus 374 -------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~--------------------- 425 (556)
T TIGR01525 374 -------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID--------------------- 425 (556)
T ss_pred -------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC---------------------
Confidence 999999999999999999999999999 999999999999999999999995
Q ss_pred ChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHH
Q 012767 237 PVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 237 ~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~ 316 (456)
++|+++.|++|.++++.++..++.|+|+|||.||++|+++||+||+++++++.+++.||+++.+++++.+.
T Consensus 426 ---------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~ 496 (556)
T TIGR01525 426 ---------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLP 496 (556)
T ss_pred ---------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012767 317 TAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLE 350 (456)
Q Consensus 317 ~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~ 350 (456)
.++++||+++++|++++.|++.++..++.+.+..
T Consensus 497 ~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g 530 (556)
T TIGR01525 497 TAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGG 530 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888777666555433
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=361.32 Aligned_cols=283 Identities=30% Similarity=0.389 Sum_probs=232.7
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcce
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ 80 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~ 80 (456)
.+++|+|+++|++|||||||||+|+|+|.++.. ..+.+.++++.+++.+++.++| |+++||+.++...+.....++
T Consensus 268 ~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~---~~~~~~~~~l~~aa~~e~~s~H-Pia~Ai~~~~~~~~~~~~~~~ 343 (562)
T TIGR01511 268 GDALERAANIDTVVFDKTGTLTQGKPTVTDVHV---FGDRDRTELLALAAALEAGSEH-PLAKAIVSYAKEKGITLVEVS 343 (562)
T ss_pred hHHHHHhhCCCEEEECCCCCCcCCCEEEEEEec---CCCCCHHHHHHHHHHHhccCCC-hHHHHHHHHHHhcCCCcCCCC
Confidence 368999999999999999999999999998542 2356678899999988888776 999999988753221111122
Q ss_pred EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCC
Q 012767 81 EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESS 160 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~ 160 (456)
.++.+|. +..... .+| ..+..|+++++.+.. ... .++.++|.+++.++.+.
T Consensus 344 ~~~~~~g----~Gi~~~---~~g--~~~~iG~~~~~~~~~---~~~--------~~~~~~g~~~~~~~~~~--------- 394 (562)
T TIGR01511 344 DFKAIPG----IGVEGT---VEG--TKIQLGNEKLLGENA---IKI--------DGKAEQGSTSVLVAVNG--------- 394 (562)
T ss_pred CeEEECC----ceEEEE---ECC--EEEEEECHHHHHhCC---CCC--------ChhhhCCCEEEEEEECC---------
Confidence 2222221 111111 244 456789999875421 111 12457899999998765
Q ss_pred CCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHH
Q 012767 161 GSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240 (456)
Q Consensus 161 e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 240 (456)
+++|++.++|++||+++++|+.|++.|++++|+|||+...+..+++++|+.
T Consensus 395 ----~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------- 445 (562)
T TIGR01511 395 ----ELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------------------- 445 (562)
T ss_pred ----EEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------
Confidence 999999999999999999999999999999999999999999999999993
Q ss_pred HHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 241 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
+|+++.|++|.++++.++.+++.|+|+|||.||++|+++||+||+++.+++.++++||+++.++++..++.++.
T Consensus 446 ------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~ 519 (562)
T TIGR01511 446 ------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAID 519 (562)
T ss_pred ------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHH
Confidence 47888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012767 321 ISRAIFQRMRNYMVRGIDGLSSTEFIQVLEL 351 (456)
Q Consensus 321 ~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~ 351 (456)
+||+++++|++|+.|++.++...+.+.++.+
T Consensus 520 lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~ 550 (562)
T TIGR01511 520 LSRKTLRRIKQNLLWAFGYNVIAIPIAAGVL 550 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999988877776665443
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=351.57 Aligned_cols=295 Identities=29% Similarity=0.396 Sum_probs=232.7
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcce
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ 80 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~ 80 (456)
++++|+++++|++|||||||||+|+|+|.++.. .+++.+++.++..++| |++.||+.++.+.. .+.
T Consensus 237 ~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~~~~h-p~~~Ai~~~~~~~~----~~~ 302 (536)
T TIGR01512 237 GAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQASSH-PLARAIVDYARKRE----NVE 302 (536)
T ss_pred cHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhccCCC-cHHHHHHHHHHhcC----CCc
Confidence 468999999999999999999999999987531 3688888877776655 99999998875321 222
Q ss_pred EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCC
Q 012767 81 EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESS 160 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~ 160 (456)
....+|.. .... ..+|. .+..|+++++.+.. . ..+..+|.+++.++.+.
T Consensus 303 ~~~~~~g~----gi~~---~~~g~--~~~ig~~~~~~~~~-----~--------~~~~~~~~~~~~v~~~~--------- 351 (536)
T TIGR01512 303 SVEEVPGE----GVRA---VVDGG--EVRIGNPRSLEAAV-----G--------ARPESAGKTIVHVARDG--------- 351 (536)
T ss_pred ceEEecCC----eEEE---EECCe--EEEEcCHHHHhhcC-----C--------cchhhCCCeEEEEEECC---------
Confidence 23333321 1111 12454 34569987764321 0 14567888988887754
Q ss_pred CCCceEeEecccCCCCCcchHHHHHHHHhCCC-eEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChH
Q 012767 161 GSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 239 (456)
Q Consensus 161 e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi-~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 239 (456)
.++|.+.++|++||+++++|+.|++.|+ +++|+|||+..++..+++++|+.
T Consensus 352 ----~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~------------------------ 403 (536)
T TIGR01512 352 ----TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID------------------------ 403 (536)
T ss_pred ----EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh------------------------
Confidence 9999999999999999999999999999 99999999999999999999995
Q ss_pred HHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHHHH
Q 012767 240 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 240 ~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~ 318 (456)
++|+++.|++|..+++.++.+++.|+|+|||.||++|++.||+||+++ ++++.++++||+++.++++..+..+
T Consensus 404 ------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~ 477 (536)
T TIGR01512 404 ------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQA 477 (536)
T ss_pred ------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHH
Confidence 368899999999999999999999999999999999999999999999 7899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcccCccccchHHH
Q 012767 319 VLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEER 379 (456)
Q Consensus 319 i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~ 379 (456)
+.+||++++++++++.|++.++..++.+.+..+ +.|+.....|.+++..+..++.|
T Consensus 478 i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~-----~~p~~aa~~m~~ss~~v~~ns~r 533 (536)
T TIGR01512 478 IRLARRTRRIVKQNVVIALGIILLLILLALFGV-----LPLWLAVLGHEGSTVLVILNALR 533 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----ccHHHHHHHHcChHHHHHHHHHh
Confidence 999999999999999888877666655544221 11112224455555555444443
|
. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=324.79 Aligned_cols=272 Identities=27% Similarity=0.398 Sum_probs=234.7
Q ss_pred hHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchh--hhhcc
Q 012767 2 SAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKE--ARADI 79 (456)
Q Consensus 2 ~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~--~~~~~ 79 (456)
.|+|..|.+|++..|||||+|.|+-.-.+++ ..++.+.+++...|..++-... .|-.+.|+..+++... .....
T Consensus 291 RAVEaaGDvdtliLDKTGTIT~GnR~A~~f~---p~~gv~~~~la~aa~lsSl~De-TpEGrSIV~LA~~~~~~~~~~~~ 366 (681)
T COG2216 291 RAVEAAGDVDTLLLDKTGTITLGNRQASEFI---PVPGVSEEELADAAQLASLADE-TPEGRSIVELAKKLGIELREDDL 366 (681)
T ss_pred chhhhcCCccEEEecccCceeecchhhhhee---cCCCCCHHHHHHHHHHhhhccC-CCCcccHHHHHHHhccCCCcccc
Confidence 3789999999999999999999988777654 3468899999888877776544 4778888876653221 11112
Q ss_pred e-EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCc-hhhhHHHHHHHHHHHccCeeeEEeeeecCCCCc
Q 012767 80 Q-EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKS-KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK 157 (456)
Q Consensus 80 ~-~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~-~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~ 157 (456)
+ ...+.||+...++..+.. .++ ..+.||+.+.+.+...... ..+..++...++.++.|-+.|.|+.+.
T Consensus 367 ~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~------ 436 (681)
T COG2216 367 QSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG------ 436 (681)
T ss_pred cccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECC------
Confidence 2 357899998877665443 233 5677999999998886433 478899999999999999999999876
Q ss_pred CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCC
Q 012767 158 ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALP 237 (456)
Q Consensus 158 ~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~ 237 (456)
+++|++.++|-++|+.+|-+.+||+.||+.+|+||||+.||..||.+.|++
T Consensus 437 -------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD---------------------- 487 (681)
T COG2216 437 -------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD---------------------- 487 (681)
T ss_pred -------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch----------------------
Confidence 999999999999999999999999999999999999999999999999996
Q ss_pred hHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHH
Q 012767 238 VDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIIT 317 (456)
Q Consensus 238 ~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~ 317 (456)
+..|+++||+|.+.|+.-|.+|+.|+|+|||.||+|||.+||||+||.+|+.+||++++.|=+++|-..+.+
T Consensus 488 --------dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PTKlie 559 (681)
T COG2216 488 --------DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPTKLIE 559 (681)
T ss_pred --------hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCccceeh
Confidence 468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 012767 318 AVLISRA 324 (456)
Q Consensus 318 ~i~~~R~ 324 (456)
.++.|++
T Consensus 560 vV~IGKq 566 (681)
T COG2216 560 VVEIGKQ 566 (681)
T ss_pred Hhhhhhh
Confidence 9999987
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-40 Score=341.50 Aligned_cols=287 Identities=26% Similarity=0.338 Sum_probs=223.9
Q ss_pred hccccEEEcCcccccccCceEEEEEeeecccC--------CCChHHHHHHHHHhc-----ccCCCChHHHHHHHhhcCch
Q 012767 7 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAG--------GVDADTVVLMAARAS-----QVENLDVIDAAIVGMLADPK 73 (456)
Q Consensus 7 l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~--------~~~~~~il~~aa~~~-----~~~~~~pi~~ai~~~~~~~~ 73 (456)
.|++|+.|||||||||+..|.|..+--. ..+ ....+.+..+|++.+ ..--.||+++|.+..+++..
T Consensus 476 AGkvdvCCFDKTGTLT~d~lvv~Gvag~-~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~ 554 (1160)
T KOG0209|consen 476 AGKVDVCCFDKTGTLTEDDLVVEGVAGL-SADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNL 554 (1160)
T ss_pred CCceeEEEecCCCccccccEEEEecccc-cCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCccc
Confidence 5899999999999999999999873210 001 112234554544332 23356899999998775321
Q ss_pred h------hh----hcceEEEeecCCCCCceEEEEEEec----CCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHH
Q 012767 74 E------AR----ADIQEVHFLPFDPTGKRTALTYIDS----EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAE 139 (456)
Q Consensus 74 ~------~~----~~~~~~~~~pf~~~~k~~~v~~~~~----~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~ 139 (456)
+ .+ ...++.+.+.|.|.-|||+++.... .-+++..+|||||.|.++.. +++..+++...+|++
T Consensus 555 ~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~---dvP~dY~~iYk~ytR 631 (1160)
T KOG0209|consen 555 EKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR---DVPKDYDEIYKRYTR 631 (1160)
T ss_pred ccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH---hCchhHHHHHHHHhh
Confidence 1 11 2467788999999999999876532 13578889999999998774 678889999999999
Q ss_pred ccCeeeEEeeeecCC--------CCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH
Q 012767 140 RGLRSLAVAYQEVPE--------GSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR 211 (456)
Q Consensus 140 ~Glr~l~vA~~~~~~--------~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~ 211 (456)
+|.|||+++|+.++. ..++..|+++.|.|++.|.-|+|+|++++|+.|++.+++++||||||+.||..+|++
T Consensus 632 ~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~ 711 (1160)
T KOG0209|consen 632 QGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKE 711 (1160)
T ss_pred ccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehhe
Confidence 999999999999873 246788999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCc---------------------------------------cccCCchhhhhhcCChHHHHhhcccccccC
Q 012767 212 LGMGTNMYPSS---------------------------------------ALSGQDRDESIVALPVDELIEKADGFAGVF 252 (456)
Q Consensus 212 lGi~~~~~~~~---------------------------------------~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~ 252 (456)
+||..+-.+.. ++.|+..+.......+.+++....+|||+.
T Consensus 712 v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARva 791 (1160)
T KOG0209|consen 712 VGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVA 791 (1160)
T ss_pred eeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeC
Confidence 99976421111 112222222222222345666777999999
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccH
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATD 297 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~ 297 (456)
|.||..++..|++.|+.++|||||.||+.|||+||||||+-+++.
T Consensus 792 P~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 792 PKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred hhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCCh
Confidence 999999999999999999999999999999999999999865444
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-29 Score=234.22 Aligned_cols=211 Identities=32% Similarity=0.413 Sum_probs=157.4
Q ss_pred ccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcceEEEeecCCC
Q 012767 10 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 89 (456)
Q Consensus 10 i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pf~~ 89 (456)
|++||||||||||+|++.+ . . .....++.++...+..++| |+..++..+....... ........+
T Consensus 1 i~~i~fDktGTLt~~~~~v-~-----~---~~~~~~~~~~~~~~~~s~~-p~~~~~~~~~~~~~~~-~~~~~~~~~---- 65 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV-A-----P---PSNEAALAIAAALEQGSEH-PIGKAIVEFAKNHQWS-KSLESFSEF---- 65 (215)
T ss_dssp ESEEEEECCTTTBESHHEE-E-----S---CSHHHHHHHHHHHHCTSTS-HHHHHHHHHHHHHHHH-SCCEEEEEE----
T ss_pred CeEEEEecCCCcccCeEEE-E-----e---ccHHHHHHHHHHhhhcCCC-cchhhhhhhhhhccch-hhhhhheee----
Confidence 6899999999999999999 1 1 5667778888777777775 9999999876542211 111111111
Q ss_pred CCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEe
Q 012767 90 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 169 (456)
Q Consensus 90 ~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~ 169 (456)
..++..... ++. +. |+++++.+..... . ............|.+.+.++.+ +.++|.
T Consensus 66 -~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 121 (215)
T PF00702_consen 66 -IGRGISGDV--DGI---YL-GSPEWIHELGIRV--I--SPDLVEEIQESQGRTVIVLAVN-------------LIFLGL 121 (215)
T ss_dssp -TTTEEEEEE--HCH---EE-HHHHHHHHHHHHH--H--HHHHHHHHHHHHHHHCEEEEES-------------HEEEEE
T ss_pred -eeccccccc--ccc---cc-ccchhhhhccccc--c--ccchhhhHHHhhCCcccceeec-------------CeEEEE
Confidence 111211111 122 33 8888887655321 1 1122223345666667777653 499999
Q ss_pred cccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccc
Q 012767 170 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 249 (456)
Q Consensus 170 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a 249 (456)
+.+.|++||+++++|+.|+++|++++|+|||+..++..+++.+||... .+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~----------------------------~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS----------------------------IVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE----------------------------EEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc----------------------------cccc
Confidence 999999999999999999999999999999999999999999999521 3799
Q ss_pred cc--CchhH--HHHHHHHhhcCCEEEEecCCCCchhhhhhcC
Q 012767 250 GV--FPEHK--YEIVKHLQARNHICGMIGNGVNDAPALKKAD 287 (456)
Q Consensus 250 ~~--~P~~K--~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Ad 287 (456)
++ +|++| ..+++.|+.+++.|+|+|||+||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-15 Score=128.48 Aligned_cols=116 Identities=28% Similarity=0.414 Sum_probs=106.7
Q ss_pred eEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhh
Q 012767 165 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 244 (456)
Q Consensus 165 ~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 244 (456)
.+.+.++---++-++++++|++|++. ++|++.|||...+....|..+||+..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 67888888889999999999999999 99999999999999999999999743
Q ss_pred cccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec---cccHHHhhcccEEeeC
Q 012767 245 ADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA---DATDAARSAADIVLTE 309 (456)
Q Consensus 245 ~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~---~~~~~a~~aaDivl~~ 309 (456)
.+|+...|+.|..+++.|+++++.|.|+|||.||.+||+.||+||..- +.+..+.++||+|+-+
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 479999999999999999999999999999999999999999999863 5777888999999855
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=6.1e-11 Score=118.76 Aligned_cols=131 Identities=19% Similarity=0.241 Sum_probs=99.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccc-cccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~-a~~~P 253 (456)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|+.....+...+..... .. .+. .-+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~l----tg----------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKL----TG----------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEE----Ee----------EecCccCCc
Confidence 5889999999999999999999999998888899999998531100000000000 00 000 01234
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
+.|.++++.+.++ ...|+|+|||.||.+|++.||+|||+ ++.+..++.||.++..+++.++..++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6788888887655 35799999999999999999999999 999999999999999999999887654
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.20 E-value=9.7e-11 Score=109.94 Aligned_cols=131 Identities=15% Similarity=0.145 Sum_probs=95.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..-..+...+.+.. .+. ......++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g---~~t------------G~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD---RVV------------GYQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC---eeE------------CeeecCcc
Confidence 57999999999999975 999999999999999999999963211111111000 000 00114578
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 322 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~~ 322 (456)
+|..+++.+++.+..+.|+|||.||.+|++.||+||++... +..+++||=+-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak-~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAP-ENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCC-HHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 89999999988888899999999999999999999999644 44555554333335677777777665
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.5e-10 Score=110.32 Aligned_cols=145 Identities=26% Similarity=0.342 Sum_probs=101.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccc-c---CC-----chhh------hh-----
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-S---GQ-----DRDE------SI----- 233 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~--~~~~l-~---g~-----~~~~------~~----- 233 (456)
+.+.+.++|++|++.|++++++||+....+..+.+.+|+..... +...+ . +. ..+. ..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 67899999999999999999999999999999999999864211 11110 0 00 0000 00
Q ss_pred ---------------------hcCC---hHHHHhhcc---------cccccCch--hHHHHHHHHhhc----CCEEEEec
Q 012767 234 ---------------------VALP---VDELIEKAD---------GFAGVFPE--HKYEIVKHLQAR----NHICGMIG 274 (456)
Q Consensus 234 ---------------------~~~~---~~~~~~~~~---------v~a~~~P~--~K~~iV~~lq~~----g~~v~~iG 274 (456)
.... ..+.+.+.. .+.++.|. .|...++.+.+. ...++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 0000 001111110 01233343 378777777654 34599999
Q ss_pred CCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 275 NGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 275 DG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
|+.||.+|++.|++|+||+|+.+.++++||+|..+++-.++..+++
T Consensus 181 D~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 9999999999999999999999999999999999899999988876
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.7e-10 Score=112.82 Aligned_cols=66 Identities=23% Similarity=0.234 Sum_probs=58.2
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.|+..++.|.+. ...|+++|||.||.+||+.|++|+||+||.+.+|++||+|..+++-.++..+|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 577777776654 245999999999999999999999999999999999999999899999988876
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=8.3e-10 Score=107.63 Aligned_cols=143 Identities=21% Similarity=0.241 Sum_probs=104.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCC----------------------------
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQ---------------------------- 227 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~---------------------------- 227 (456)
+.+.++++|+++++.|++|+++||.....+..+.+.+++..... ..+|.
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I---~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~ 97 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLI---TFNGALIYNGGELLFQKPLSREDVEELLELLED 97 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEE---EeCCeEEecCCcEEeeecCCHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999999999975110 00000
Q ss_pred -----------c-----hhh---------------------hhh-------c---CChHHHH---hh-c----c------
Q 012767 228 -----------D-----RDE---------------------SIV-------A---LPVDELI---EK-A----D------ 246 (456)
Q Consensus 228 -----------~-----~~~---------------------~~~-------~---~~~~~~~---~~-~----~------ 246 (456)
. ... ... . ....++. .+ . .
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~ 177 (264)
T COG0561 98 FQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSG 177 (264)
T ss_pred ccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcC
Confidence 0 000 000 0 0001111 00 0 0
Q ss_pred -cccccCc--hhHHHHHHHHhhc-CC---EEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHH
Q 012767 247 -GFAGVFP--EHKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 247 -v~a~~~P--~~K~~iV~~lq~~-g~---~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
.+..+.| .+|+..++.+.+. |- .|+++||+.||.+||+.|+.||||+|+.+.+++.||++...++-.+|..+|
T Consensus 178 ~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l 257 (264)
T COG0561 178 PISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEAL 257 (264)
T ss_pred CceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHH
Confidence 1134444 4688888888774 43 499999999999999999999999999999999999888999999999888
Q ss_pred HH
Q 012767 320 LI 321 (456)
Q Consensus 320 ~~ 321 (456)
+.
T Consensus 258 ~~ 259 (264)
T COG0561 258 EK 259 (264)
T ss_pred HH
Confidence 73
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.1e-10 Score=109.67 Aligned_cols=66 Identities=17% Similarity=0.189 Sum_probs=57.8
Q ss_pred hHHHHHHHHhhc-C---CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccE--EeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI--VLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDi--vl~~~~l~~i~~~i~ 320 (456)
.|+.-++.|.+. | ..|+++|||.||.+||+.|+.||||+||.+.+|++||. |+.+++-+++..+|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 588888888665 2 45999999999999999999999999999999999986 777888899988875
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.7e-10 Score=105.07 Aligned_cols=129 Identities=21% Similarity=0.266 Sum_probs=94.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccc-cCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG-VFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~-~~P 253 (456)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..- +.......+. .... .+... ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~---~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVEDG---KLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEECC---EEEE----------EecCcccCC
Confidence 5899999999999999999999999999999999999998631 1100000000 0000 00011 223
Q ss_pred hhHHHHHHHHhhcC----CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHH
Q 012767 254 EHKYEIVKHLQARN----HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 254 ~~K~~iV~~lq~~g----~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 318 (456)
..|..+++.+.++. ..|+|+||+.||.+|++.|+++++++ +.+..+.+||+++.+++|..+..+
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 44777777665542 35999999999999999999999984 568888999999999998887654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.8e-10 Score=106.65 Aligned_cols=144 Identities=21% Similarity=0.252 Sum_probs=100.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccccC--C------chhh-------------
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSG--Q------DRDE------------- 231 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~--~~~~l~g--~------~~~~------------- 231 (456)
.+.+.+.++|++|++.|++++++||.....+..+.+.+++..... +...+.. . ....
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 478899999999999999999999999999999999999863211 0000000 0 0000
Q ss_pred -hhh-c------------CC---hHHHHhhcc-------cccccCc--hhHHHHHHHHhhc----CCEEEEecCCCCchh
Q 012767 232 -SIV-A------------LP---VDELIEKAD-------GFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGVNDAP 281 (456)
Q Consensus 232 -~~~-~------------~~---~~~~~~~~~-------v~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG~ND~~ 281 (456)
... . .. ..+.+.... .+..++| ..|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 000 0 00 001111111 1123333 4788888887664 235999999999999
Q ss_pred hhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHH
Q 012767 282 ALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 282 aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 318 (456)
|++.|++|+||+|+.+.+++.||+|...++-.++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999988888877664
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.2e-09 Score=106.56 Aligned_cols=66 Identities=18% Similarity=0.241 Sum_probs=57.1
Q ss_pred hHHHHHHHHhhc-C---CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhccc--EEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD--IVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaD--ivl~~~~l~~i~~~i~ 320 (456)
.|...++.+.+. | ..|+++||+.||.+||+.|+.|+||+||.+.+|+.|| .|+.+++-+++..+|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 477777777654 2 4599999999999999999999999999999999987 6777888889988875
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.2e-09 Score=97.97 Aligned_cols=105 Identities=26% Similarity=0.350 Sum_probs=83.0
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHH
Q 012767 183 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 262 (456)
Q Consensus 183 ~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 262 (456)
+|+.|++.|+++.|+||+....+..+.+.+|+.. .|... ..|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~------------------------------~~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH------------------------------LYQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE------------------------------EEecc--cchHHHHHH
Confidence 8999999999999999999999999999999852 11111 234444444
Q ss_pred Hhh----cCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchH-HHHHH
Q 012767 263 LQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV-IITAV 319 (456)
Q Consensus 263 lq~----~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~-i~~~i 319 (456)
+.+ ....|+|+||+.||.+|++.|+++++|.++.+..+..+++++..+.-.+ +.+++
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 433 3457999999999999999999999999999999999999998776444 44433
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.1e-09 Score=99.79 Aligned_cols=103 Identities=18% Similarity=0.256 Sum_probs=81.5
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccC--chhHHHH
Q 012767 182 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF--PEHKYEI 259 (456)
Q Consensus 182 ~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~--P~~K~~i 259 (456)
..|+.|++.|+++.++|+.....+..+.+.+|+.. +|.... |+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~------------------------------~f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR------------------------------FHEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE------------------------------EEecCCCCHHHHHHH
Confidence 57999999999999999999999999999999952 222222 2222334
Q ss_pred HHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchH
Q 012767 260 VKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV 314 (456)
Q Consensus 260 V~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~ 314 (456)
++.++-....|+++||+.||.+|++.|++++||+++.+.++..|++|+..++-.+
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g 145 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHG 145 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCC
Confidence 4444333456999999999999999999999999999999999999987655444
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.4e-09 Score=103.23 Aligned_cols=146 Identities=23% Similarity=0.278 Sum_probs=100.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccc-cCC--------chhh------------
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-SGQ--------DRDE------------ 231 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~--~~~~l-~g~--------~~~~------------ 231 (456)
.+.+.+.++|+++++.|+.++++||.+...+..+.+.+|+....+ +...+ ... ..+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999999643111 00000 000 0000
Q ss_pred ---hhh-c-------------CC---hHHHHhhcc---------cccccCc--hhHHHHHHHHhhc----CCEEEEecCC
Q 012767 232 ---SIV-A-------------LP---VDELIEKAD---------GFAGVFP--EHKYEIVKHLQAR----NHICGMIGNG 276 (456)
Q Consensus 232 ---~~~-~-------------~~---~~~~~~~~~---------v~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG 276 (456)
... . .+ ..++..... .+..+.| ..|...++.+.++ ...|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 000 0 00 001111110 1223334 4688888877664 2469999999
Q ss_pred CCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchH----HHHHHH
Q 012767 277 VNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV----IITAVL 320 (456)
Q Consensus 277 ~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~----i~~~i~ 320 (456)
.||.+|++.|++|+||+|+.+.+++.||.|..+++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999998888888 665554
|
catalyze the same reaction as SPP. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.94 E-value=5.5e-09 Score=99.67 Aligned_cols=147 Identities=18% Similarity=0.221 Sum_probs=102.0
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccc-cC-----------------------
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-SG----------------------- 226 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~--~~~~l-~g----------------------- 226 (456)
...+.+.+.++|+++++.|+++++.||+....+..+...+++..... +...+ ..
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 34577999999999999999999999999999999999999863110 00000 00
Q ss_pred -----------------Cc---hh-----------------hhhhcCC------------hHH----HHhhc--------
Q 012767 227 -----------------QD---RD-----------------ESIVALP------------VDE----LIEKA-------- 245 (456)
Q Consensus 227 -----------------~~---~~-----------------~~~~~~~------------~~~----~~~~~-------- 245 (456)
.. .. ......+ ... +-+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 00 00 0000000 000 00010
Q ss_pred --ccccccCc--hhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHH
Q 012767 246 --DGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIIT 317 (456)
Q Consensus 246 --~v~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~ 317 (456)
..+-.++| ..|+..++.+.+. ...++++||+.||.+||+.|+.|+||+++++..+..||+++...+-.+|.+
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHH
Confidence 12234445 5699888888754 357999999999999999999999999999999999999998877788887
Q ss_pred HH
Q 012767 318 AV 319 (456)
Q Consensus 318 ~i 319 (456)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 64
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.8e-09 Score=100.62 Aligned_cols=115 Identities=23% Similarity=0.231 Sum_probs=86.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCc-----cccCCchhhhhhcCChHHHHhhcccc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSS-----ALSGQDRDESIVALPVDELIEKADGF 248 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~-----~l~g~~~~~~~~~~~~~~~~~~~~v~ 248 (456)
.+++|++.+.++.+++.|.+|+++||-....+..+++.+|+....-+.. .+.|. +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~-------------------v~ 136 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR-------------------VV 136 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece-------------------ee
Confidence 5789999999999999999999999999999999999999975322111 12221 12
Q ss_pred c-ccCchhHHHHHHHHhhc-CC---EEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEee
Q 012767 249 A-GVFPEHKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 308 (456)
Q Consensus 249 a-~~~P~~K~~iV~~lq~~-g~---~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~ 308 (456)
. .+..+.|...++.+.+. |. .+.++|||.||.|||+.|+.+|++. +....+..|+....
T Consensus 137 g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n-~~~~l~~~a~~~~~ 200 (212)
T COG0560 137 GPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN-PKPKLRALADVRIW 200 (212)
T ss_pred eeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC-cCHHHHHHHHHhcC
Confidence 2 34457898888766654 44 4999999999999999999999995 34445555555443
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.5e-08 Score=108.74 Aligned_cols=66 Identities=24% Similarity=0.321 Sum_probs=57.2
Q ss_pred hHHHHHHHHhhcC----CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQARN----HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~g----~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.|+..++.|.+.- ..|+++|||.||.+||+.|+.||||+||.+.+|++||+|..+++-++|..+|+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4666666665542 35999999999999999999999999999999999999999999999998886
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.3e-08 Score=99.46 Aligned_cols=66 Identities=23% Similarity=0.333 Sum_probs=57.1
Q ss_pred hHHHHHHHHhhc-C---CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.|...++.+.++ | ..|+++||+.||.+|++.|++|++|+++.+..+..||+|+.+++-.++..+|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 477666666544 2 35999999999999999999999999999999999999999999999998876
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.2e-08 Score=94.22 Aligned_cols=110 Identities=25% Similarity=0.381 Sum_probs=84.3
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHH
Q 012767 182 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 261 (456)
Q Consensus 182 ~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~ 261 (456)
..|+.|++.|+++.++||.....+..+++.+|+.. +|.. .+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~------------------------------~f~g--~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH------------------------------LYQG--QSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce------------------------------eecC--CCcHHHHHH
Confidence 68999999999999999999999999999999852 1221 234555555
Q ss_pred HHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCC----chHHHHHHHHHH
Q 012767 262 HLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG----LNVIITAVLISR 323 (456)
Q Consensus 262 ~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~----l~~i~~~i~~~R 323 (456)
.+.++ ...|+||||+.||.+|++.|+++++++++.+..+..+|+++..++ +..+.+.+...|
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 44332 346999999999999999999999999888888999999986444 344444444443
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.2e-08 Score=98.90 Aligned_cols=64 Identities=23% Similarity=0.287 Sum_probs=56.6
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHH
Q 012767 255 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 255 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 318 (456)
.|...++.+.+. ...++++||+.||++|++.|++|+||+++.+.+++.||+++.+++-.+|..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 588888888765 2469999999999999999999999999999999999999988888887764
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.80 E-value=9.3e-09 Score=83.90 Aligned_cols=64 Identities=30% Similarity=0.381 Sum_probs=53.0
Q ss_pred CCChHHHHHHHhhcC------chhhhhcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhcc
Q 012767 57 NLDVIDAAIVGMLAD------PKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH 121 (456)
Q Consensus 57 ~~~pi~~ai~~~~~~------~~~~~~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~ 121 (456)
..+|.|.||+.++.. ....+..+++++.+||+|.+|+|+++++ .++...+++|||||.|+++|+
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcC
Confidence 457999999887643 2356788999999999999999999998 334566799999999999996
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=5.3e-08 Score=90.98 Aligned_cols=128 Identities=20% Similarity=0.230 Sum_probs=89.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++. +++.++|+.....+..+..++|+..-........++.. . ..+....|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~---i------------~~~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGM---I------------TGYDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCe---E------------ECccccccc
Confidence 3679999999999999 99999999999999999999998521100000000000 0 001112467
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccE-EeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI-VLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDi-vl~~~~l~~i~~~i~ 320 (456)
.|...++.++..+..++|+|||.||.+|.+.|++|+.++.........++. ++ +++..+...+.
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 196 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAID 196 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHHH
Confidence 888899988888889999999999999999999999886543334445554 44 45666655444
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.5e-08 Score=88.73 Aligned_cols=114 Identities=24% Similarity=0.413 Sum_probs=91.7
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHH
Q 012767 183 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 262 (456)
Q Consensus 183 ~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 262 (456)
.|+.|.++||+|-++||.+...+..-++.|||. .+|-. -++|....+.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~------------------------------~~~qG--~~dK~~a~~~ 90 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK------------------------------HLYQG--ISDKLAAFEE 90 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc------------------------------eeeec--hHhHHHHHHH
Confidence 489999999999999999999999999999995 12222 2567766666
Q ss_pred Hhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCC----chHHHHHHHHHHHHHHH
Q 012767 263 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG----LNVIITAVLISRAIFQR 328 (456)
Q Consensus 263 lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~----l~~i~~~i~~~R~i~~~ 328 (456)
|.++ ...|+++||..||.|+|++.++++|+.++.+..++.||+|+...+ +..+.++|..++..++-
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 6554 346999999999999999999999999999999999999998665 44456666666555443
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.73 E-value=8.5e-08 Score=93.14 Aligned_cols=66 Identities=18% Similarity=0.207 Sum_probs=54.1
Q ss_pred hHHHHHHHHhhc------CCEEEEecCCCCchhhhhhcCeeEEecccc---HHHhhc--c-cEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQAR------NHICGMIGNGVNDAPALKKADIGIAVADAT---DAARSA--A-DIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~------g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~---~~a~~a--a-Divl~~~~l~~i~~~i~ 320 (456)
.|...++.+.+. ...++++||+.||.+||+.|+.||||+|+. +..++. | ++|..+++-+++..+++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 566666666543 456999999999999999999999999987 467876 4 58888889999998876
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.7e-08 Score=90.78 Aligned_cols=117 Identities=25% Similarity=0.331 Sum_probs=82.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
+++|++.++++.|++.|+++.++|+-....+..+.+.+|+.. .+...+...+... . +-..+....|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g~--~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKGF--I----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCCe--E----------ecceeeEEccc
Confidence 579999999999999999999999999999999999999752 1111111100000 0 00011123456
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhccc
Q 012767 255 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD 304 (456)
Q Consensus 255 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaD 304 (456)
.|.++++.+.++ ...++|+||+.||.+|++.||++++++......+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 677777766544 34599999999999999999999999865555666665
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.62 E-value=3.8e-07 Score=89.40 Aligned_cols=67 Identities=21% Similarity=0.172 Sum_probs=53.6
Q ss_pred hhHHHHHHHHhh-------cCCEEEEecCCCCchhhhhhcCeeEEecccc-HH-----HhhcccEEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQA-------RNHICGMIGNGVNDAPALKKADIGIAVADAT-DA-----ARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~-------~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~-~~-----a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.+|+..++.|.+ ....|+++||+.||.+||+.|++||||+++. +. .+..+|++....+-.++.++++
T Consensus 186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 457777766654 3356999999999999999999999999654 21 3457899999999899988876
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.7e-07 Score=90.54 Aligned_cols=66 Identities=24% Similarity=0.327 Sum_probs=54.4
Q ss_pred hHHHHHHHHhh----cC-CEEEEecCCCCchhhhhhcCeeEEeccccHHHh----hcc-cEEe--eCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQA----RN-HICGMIGNGVNDAPALKKADIGIAVADATDAAR----SAA-DIVL--TEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~----~g-~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~----~aa-Divl--~~~~l~~i~~~i~ 320 (456)
.|...++.+.+ .. ..|+++||+.||.+|++.|++|++|+||.+.++ .+| +.+. ..++-.++..++.
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 67766766654 35 789999999999999999999999999999999 666 6666 5667888887775
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.7e-07 Score=85.60 Aligned_cols=111 Identities=16% Similarity=0.093 Sum_probs=77.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC-CccccCCchhhhhhcCChHHHHhhcccc--cc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP-SSALSGQDRDESIVALPVDELIEKADGF--AG 250 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~-~~~l~g~~~~~~~~~~~~~~~~~~~~v~--a~ 250 (456)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++....++. ...+.++..... .+.. ..+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~---~p~~------~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHID---WPHP------CDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEe---CCCC------Ccccccc
Confidence 36899999999999999999999999999888888888754332221 112222211100 0000 000 00
Q ss_pred cCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec
Q 012767 251 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA 293 (456)
Q Consensus 251 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~ 293 (456)
-....|..+++.++.....++|+|||.||.+|++.||+.+|-+
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 1135799999998888888999999999999999999987754
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.3e-07 Score=84.06 Aligned_cols=109 Identities=20% Similarity=0.203 Sum_probs=75.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchh
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 255 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 255 (456)
+-|++++.+..|++.|.+|.++||.-...+..++.+|||+-.......+.-+..-+ ...++. --.-+...-
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk---~~gfd~------~~ptsdsgg 159 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK---YLGFDT------NEPTSDSGG 159 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc---cccccc------CCccccCCc
Confidence 56899999999999999999999999999999999999985322111111000000 000000 000112346
Q ss_pred HHHHHHHHhhc--CCEEEEecCCCCchhhhhhcCeeEEec
Q 012767 256 KYEIVKHLQAR--NHICGMIGNGVNDAPALKKADIGIAVA 293 (456)
Q Consensus 256 K~~iV~~lq~~--g~~v~~iGDG~ND~~aLk~AdvGIa~~ 293 (456)
|.+++..+++. ...++|||||.||.+|+..||.=|+.+
T Consensus 160 Ka~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 160 KAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 89999998875 456999999999999999977666654
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.6e-06 Score=82.22 Aligned_cols=130 Identities=22% Similarity=0.297 Sum_probs=82.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC-CCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++|++.++++.|++.|+++.++||.....+..+.+.+|+.. +.+...+....+. ...... .......+.
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g--~~~g~~--------~~~~~~~~~ 154 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG--EYAGFD--------ENEPTSRSG 154 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC--cEECcc--------CCCcccCCc
Confidence 68999999999999999999999999999999999999963 2221100000000 000000 000001224
Q ss_pred hHHHHHHHHhhc--CCEEEEecCCCCchhhhhh--cCeeEEeccc--cHHHhhcccEEeeCCCchHHHH
Q 012767 255 HKYEIVKHLQAR--NHICGMIGNGVNDAPALKK--ADIGIAVADA--TDAARSAADIVLTEPGLNVIIT 317 (456)
Q Consensus 255 ~K~~iV~~lq~~--g~~v~~iGDG~ND~~aLk~--AdvGIa~~~~--~~~a~~aaDivl~~~~l~~i~~ 317 (456)
.|.+.++.+.++ ...++|+||+.||..|.+. ++++++.+.. .+.....+|+++. ++..+..
T Consensus 155 ~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 155 GKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred cHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 577777776654 3569999999999999888 4555555532 2334556898884 4555544
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.41 E-value=6.3e-07 Score=82.46 Aligned_cols=92 Identities=24% Similarity=0.289 Sum_probs=68.4
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch-h-
Q 012767 178 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE-H- 255 (456)
Q Consensus 178 ~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~-~- 255 (456)
+++.+.|+.+++.|++++|+||+....+..+++.+|++........+.... ......+++|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNG---------------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTT---------------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecc---------------cceeeeeECCCCCC
Confidence 788899999999999999999999999999999999974211010010000 00123444444 4
Q ss_pred -HHHHHHHH------hhcCCEEEEecCCCCchhhhh
Q 012767 256 -KYEIVKHL------QARNHICGMIGNGVNDAPALK 284 (456)
Q Consensus 256 -K~~iV~~l------q~~g~~v~~iGDG~ND~~aLk 284 (456)
|...++.+ +.....++++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999986
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.1e-06 Score=81.44 Aligned_cols=109 Identities=17% Similarity=0.110 Sum_probs=74.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--CccccCCchhhhhhcCChHHHHhhccc-cccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDELIEKADG-FAGV 251 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~--~~~l~g~~~~~~~~~~~~~~~~~~~~v-~a~~ 251 (456)
+++|++.++++.|++.|+++.++||-....+..+.+.+ +....+. ...+.|+.... ..+..+ .. +...
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~---~kp~p~-----~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI---TWPHPC-----DEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE---eccCCc-----ccccccc
Confidence 57999999999999999999999999999999999888 6431110 11122211100 000000 00 0000
Q ss_pred CchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 252 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 252 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
....|..+++.++.....|+|+|||.||.+|.+.||+.++-
T Consensus 145 ~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 145 CGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred CCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 11348888998887777899999999999999999997773
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.1e-06 Score=79.79 Aligned_cols=98 Identities=18% Similarity=0.167 Sum_probs=69.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccc--cccCc
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF--AGVFP 253 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~--a~~~P 253 (456)
++|++.+.++.+++.|++++++||.....+..++..+|+..-.-+...+..+. .... .+. ....+
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g---~~~g----------~~~~~~~~~~ 140 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG---LLTG----------PIEGQVNPEG 140 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC---EEeC----------ccCCcccCCc
Confidence 58999999999999999999999999999999999999862111100010000 0000 000 12446
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhc
Q 012767 254 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKA 286 (456)
Q Consensus 254 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~A 286 (456)
..|..+++.+.+. ...++++|||.||.+|++.|
T Consensus 141 ~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 141 ECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred chHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 7899999887654 34699999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.6e-06 Score=80.78 Aligned_cols=109 Identities=16% Similarity=0.127 Sum_probs=77.4
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccc-ccc
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGV 251 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~-a~~ 251 (456)
..+++|++.+.|+.+++.|++++++||.....+..+++.+|+.. .+......+.+ ..... .+. -.+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~~--g~~~g----------~~~~~~~ 151 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESED--GIYTG----------NIDGNNC 151 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcCC--CEEeC----------CccCCCC
Confidence 34689999999999999999999999999999999999999853 11111110000 00000 000 123
Q ss_pred CchhHHHHHHHHhhc-C---CEEEEecCCCCchhhhhhcCeeEEecc
Q 012767 252 FPEHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVAD 294 (456)
Q Consensus 252 ~P~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~ 294 (456)
.++.|...++.+.++ + ..+.++||+.+|.||++.|+.++++..
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 467788877766543 3 368999999999999999999999863
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.1e-06 Score=78.70 Aligned_cols=114 Identities=16% Similarity=0.066 Sum_probs=75.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccc-ccC
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA-GVF 252 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a-~~~ 252 (456)
-+++|++.+.++.|++.|+++.++|+........+.+..|+.... ..++.....-+. .+. ..-...++..+. ...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~ 146 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIYSNPASFDN-DGR-HIVWPHHCHGCCSCPC 146 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEeccCceECC-CCc-EEEecCCCCccCcCCC
Confidence 368899999999999999999999999999999999998885321 111111100000 000 000000001111 112
Q ss_pred chhHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCeeEE
Q 012767 253 PEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIA 291 (456)
Q Consensus 253 P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvGIa 291 (456)
...|.++++.++.+ ...++++|||.||..|.+.||+-.|
T Consensus 147 g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 147 GCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 23589999999887 8899999999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=8.5e-06 Score=77.06 Aligned_cols=126 Identities=16% Similarity=0.208 Sum_probs=88.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
-++.|++.+.++.|++.|+++.++||........+.+.+|+... + ..++.++. +....|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~-f-~~~~~~~~-------------------~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADY-F-SVVIGGDS-------------------LPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccC-c-cEEEcCCC-------------------CCCCCc
Confidence 45789999999999999999999999999999899999998532 1 11111110 111222
Q ss_pred --hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe-eEEecc----ccHHHhhcccEEeeCCCchHHHHHHHHH
Q 012767 254 --EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD----ATDAARSAADIVLTEPGLNVIITAVLIS 322 (456)
Q Consensus 254 --~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~----~~~~a~~aaDivl~~~~l~~i~~~i~~~ 322 (456)
+--..+++.++.....++++||+.||+.+.+.||+ +|.+.. ..+.....+++++ +++..+..++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 22234555555556679999999999999999999 666542 2334445688877 6688888777643
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.26 E-value=4.2e-06 Score=80.94 Aligned_cols=147 Identities=17% Similarity=0.128 Sum_probs=97.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC----CCc-cccCC-c-hhh---------------
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY----PSS-ALSGQ-D-RDE--------------- 231 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~----~~~-~l~g~-~-~~~--------------- 231 (456)
.+..|...++++++++.|+.++++||.....+..+.+++++....+ +.. ++.+. . .+.
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 4566889999999999999999999999999999999888754210 111 00000 0 000
Q ss_pred --hhh---cC--------------------C----h---HHHHhhc--cc--------ccccCc--hhHHHHHHHHhhc-
Q 012767 232 --SIV---AL--------------------P----V---DELIEKA--DG--------FAGVFP--EHKYEIVKHLQAR- 266 (456)
Q Consensus 232 --~~~---~~--------------------~----~---~~~~~~~--~v--------~a~~~P--~~K~~iV~~lq~~- 266 (456)
... .. . . .+.+... .+ +-.+.| ..|...++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 000 00 0 0 0011110 00 113344 4688888888664
Q ss_pred ---CCEEEEecCCCCchhhhhh-cCeeEEeccccHHHhhccc-------EEeeCCCchHHHHHHH
Q 012767 267 ---NHICGMIGNGVNDAPALKK-ADIGIAVADATDAARSAAD-------IVLTEPGLNVIITAVL 320 (456)
Q Consensus 267 ---g~~v~~iGDG~ND~~aLk~-AdvGIa~~~~~~~a~~aaD-------ivl~~~~l~~i~~~i~ 320 (456)
...|+++||+.||.+|++. ++.|++|+|+.+..++.++ ++....+-+++.+++.
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3569999999999999998 6799999999998887543 5565666788887775
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.7e-05 Score=75.26 Aligned_cols=126 Identities=19% Similarity=0.217 Sum_probs=90.1
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccC
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 252 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~ 252 (456)
...+-|++++++..|+++|++..++|++....+..+.+..|+..-.. .++.++.. ....-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~--~i~g~~~~-----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD--VIVGGDDV-----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc--eEEcCCCC-----------------CCCCcC
Confidence 34578999999999999999999999999999999999999864211 11111100 112234
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcC---eeEEecc--ccHHHhhcccEEeeCCCchHHHHHH
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD---IGIAVAD--ATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Ad---vGIa~~~--~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
|.....+++.+......++||||..+|+.|-++|+ ||+..+. ........+|+++. ++..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHH
Confidence 55555666666655457999999999999999998 5566653 34566667899984 466666554
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.9e-05 Score=73.78 Aligned_cols=124 Identities=16% Similarity=0.193 Sum_probs=82.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+....+.+|+..-. ..++..++. ....-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF--DHVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe--eeEEecCcC-----------------CCCCCChH
Confidence 57899999999999999999999999998888888889885311 011111000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE-ec----cccHHHhhcccEEeeCCCchHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VA----DATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~----~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
-=..+++.++-....++||||+.+|+.+-+++++... +. ...+.....+|+++ +++..+..++
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 2234445555445679999999999999999998643 22 22234456788887 4466555443
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.07 E-value=6e-06 Score=79.15 Aligned_cols=68 Identities=16% Similarity=0.173 Sum_probs=58.9
Q ss_pred hhHHHHHHHHhhc-C---CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhccc----EEeeCCCchHHHHHHHH
Q 012767 254 EHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD----IVLTEPGLNVIITAVLI 321 (456)
Q Consensus 254 ~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaD----ivl~~~~l~~i~~~i~~ 321 (456)
..|...++.+.++ | ..|+++||+.||.+|++.++.||+|+++.+..+..|| +|...++-.++.++|.+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 4788888888765 2 2589999999999999999999999999999999999 78777888889888863
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.5e-05 Score=81.15 Aligned_cols=71 Identities=24% Similarity=0.237 Sum_probs=55.6
Q ss_pred ccCch--hHHHHHHHHhhc-------CCEEEEecCCCCchhhhhhcC-eeEEeccccHHHhhcc--------cEEee-CC
Q 012767 250 GVFPE--HKYEIVKHLQAR-------NHICGMIGNGVNDAPALKKAD-IGIAVADATDAARSAA--------DIVLT-EP 310 (456)
Q Consensus 250 ~~~P~--~K~~iV~~lq~~-------g~~v~~iGDG~ND~~aLk~Ad-vGIa~~~~~~~a~~aa--------Divl~-~~ 310 (456)
++.|. .|...++.|.++ ...|+++||+.||.+||+.++ .||+|+|+.+..++.+ +++.. ++
T Consensus 168 dI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~ 247 (413)
T PLN02382 168 DVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATER 247 (413)
T ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCC
Confidence 44553 599888888665 236899999999999999999 6999999999998743 55533 55
Q ss_pred CchHHHHHHH
Q 012767 311 GLNVIITAVL 320 (456)
Q Consensus 311 ~l~~i~~~i~ 320 (456)
+-.+|.++|.
T Consensus 248 ~~~GI~~al~ 257 (413)
T PLN02382 248 CAAGIIQAIG 257 (413)
T ss_pred CccHHHHHHH
Confidence 6778888776
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00012 Score=77.40 Aligned_cols=98 Identities=15% Similarity=0.177 Sum_probs=74.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
|++|++.+.++++++.|+++.++|+-+...+..+++.+|+.+. ++.+++ ..++.|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigsd~-------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFASDG-------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeCCC-------------------ccccCCc
Confidence 4789999999999999999999999999999999999997321 111110 1245667
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATD 297 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~ 297 (456)
.|.+.++..... +.+.++||..||.++++.|+-+++++.+..
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~ 169 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPG 169 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHH
Confidence 776655433222 226789999999999999999999985443
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.99 E-value=2.1e-05 Score=67.08 Aligned_cols=118 Identities=14% Similarity=0.064 Sum_probs=73.1
Q ss_pred ccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccc
Q 012767 171 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 250 (456)
Q Consensus 171 ~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~ 250 (456)
....++.+++.+.++.|++.|++++++||.....+....+.+|+... ...++............ ..........+..
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYYPKE-GLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhcccc-cccccccccccCC
Confidence 34568899999999999999999999999999999999999987421 11111110000000000 0000000011223
Q ss_pred cCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhh-cCeeEE
Q 012767 251 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKK-ADIGIA 291 (456)
Q Consensus 251 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~-AdvGIa 291 (456)
-.|+.+..+.+.+......++++||+.+|..|++. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 34444555666665556779999999999999998 444443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=7.7e-05 Score=70.19 Aligned_cols=123 Identities=18% Similarity=0.184 Sum_probs=81.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchh
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 255 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 255 (456)
+.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+++.. ...-.|+-
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~p~~ 143 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDVE-----------------HAKPDPEP 143 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcCC-----------------CCCCCcHH
Confidence 6799999999999999999999999999999888999985321 1111111000 01122232
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE-e--cc-ccH-HHhhcccEEeeCCCchHHHHHH
Q 012767 256 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-V--AD-ATD-AARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 256 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~--~~-~~~-~a~~aaDivl~~~~l~~i~~~i 319 (456)
-..+++.+......++||||+.+|+.|-++|++-.. + +. ..+ .....+|+++ +++..+..++
T Consensus 144 ~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 144 VLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 234445554445679999999999999999998533 2 21 122 2344688877 4577776654
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.89 E-value=7.1e-05 Score=70.09 Aligned_cols=122 Identities=15% Similarity=0.153 Sum_probs=79.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+++.. ...-.|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA-----------------QRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC-----------------CCCCChH
Confidence 57899999999999999999999999999999999999985321 1111111000 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec---cc--cHHHhhcccEEeeCCCchHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA---DA--TDAARSAADIVLTEPGLNVIIT 317 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~---~~--~~~a~~aaDivl~~~~l~~i~~ 317 (456)
-=..+.+.+......++|+||+.+|+.+.++|++....- .. .......+|+++. ++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 123334444444566999999999999999999875532 11 1222346888773 4555443
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.87 E-value=5.3e-05 Score=72.27 Aligned_cols=44 Identities=14% Similarity=0.140 Sum_probs=38.7
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 216 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~ 216 (456)
.+..-+.+.++|++|++.|++++++||.....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34555679999999999999999999999999999999999853
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0001 Score=72.45 Aligned_cols=125 Identities=14% Similarity=0.162 Sum_probs=80.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
.++.|++.++++.|++.|+++.++|+.....+..+....|+.... ..++.+++.. ...-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 467899999999999999999999999988888888888875211 1111111000 001111
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe-eEEecc----ccHHHhhcccEEeeCCCchHHHHHH
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD----ATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~----~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
+-=..+++.+.-....++||||+.||+.+.+.|++ .+++.. ..+.....+|.++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 11123333333335679999999999999999997 344432 2223445788888 4566665443
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00016 Score=70.78 Aligned_cols=140 Identities=9% Similarity=0.098 Sum_probs=84.9
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCcHHHHHHHHHHhCCCC---C---CC--CCc----cccCCchh-------hhh-
Q 012767 175 PPIHDSAETIRRALS-LGLGVKMITGDQLAIAKETGRRLGMGT---N---MY--PSS----ALSGQDRD-------ESI- 233 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~-~Gi~v~miTGD~~~~a~~ia~~lGi~~---~---~~--~~~----~l~g~~~~-------~~~- 233 (456)
.+-+++.++|+.|++ .|+.|+++||+.......+.+.+++.- + .. ... .+..+... +..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 455789999999997 799999999999999888877665320 0 00 000 00000000 000
Q ss_pred ------------------hcC--C---hH----HHHhhcc--------cccccCc--hhHHHHHHHHhhc----CCEEEE
Q 012767 234 ------------------VAL--P---VD----ELIEKAD--------GFAGVFP--EHKYEIVKHLQAR----NHICGM 272 (456)
Q Consensus 234 ------------------~~~--~---~~----~~~~~~~--------v~a~~~P--~~K~~iV~~lq~~----g~~v~~ 272 (456)
... + .. .+..... .+.++.| .+|...++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000 0 00 1111111 1223334 3788888877654 356999
Q ss_pred ecCCCCchhhhhhc----CeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 273 IGNGVNDAPALKKA----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 273 iGDG~ND~~aLk~A----dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
+||+.||.+||+.+ +.||+||++. ..|++.|. +...+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLA--GVPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCC--CHHHHHHHHH
Confidence 99999999999999 9999999864 45677775 4555554443
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00014 Score=68.99 Aligned_cols=122 Identities=16% Similarity=0.217 Sum_probs=77.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
-++.|++.++++.|++.|+++.++|+........+.+.+|+..-. ..++.+++. ....-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKL-----------------PYSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccC-----------------CCCCCCH
Confidence 357899999999999999999999999999999999999985321 111111100 0111112
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec-cc---cHHHhhcccEEeeCCCchHHH
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DA---TDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~---~~~a~~aaDivl~~~~l~~i~ 316 (456)
+-=..+.+.+.-....|+|+||..||+.+-+.||+....- .+ .+.-...+|+++. ++..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 2112223333333456999999999999999999876543 21 1122235677763 355543
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00016 Score=68.47 Aligned_cols=38 Identities=21% Similarity=0.238 Sum_probs=35.5
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 012767 178 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 215 (456)
Q Consensus 178 ~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~ 215 (456)
+.++++|+.|++.|++++++||.....+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00025 Score=66.96 Aligned_cols=125 Identities=18% Similarity=0.159 Sum_probs=79.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
.++.||+.+.++.|++.|+++.++|+-.......+.+.+|+....+-..++.+.+.. ...-.|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~-----------------~~KP~p 148 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA-----------------AGRPAP 148 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC-----------------CCCCCH
Confidence 368999999999999999999999999999999999999985211111222221100 011112
Q ss_pred hhHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCeeE--Eeccc--c-H-HHhhcccEEeeCCCchHHHH
Q 012767 254 EHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGI--AVADA--T-D-AARSAADIVLTEPGLNVIIT 317 (456)
Q Consensus 254 ~~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvGI--a~~~~--~-~-~a~~aaDivl~~~~l~~i~~ 317 (456)
+-=...++.+.-. ...++||||+.+|+.+-+.|++.. ++..+ + . .....+|.++ +++..+..
T Consensus 149 ~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 149 DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 2112233333333 357999999999999999999986 33322 1 1 1234567776 34555544
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00032 Score=74.24 Aligned_cols=131 Identities=21% Similarity=0.212 Sum_probs=96.6
Q ss_pred CceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccc-----------------
Q 012767 163 PWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALS----------------- 225 (456)
Q Consensus 163 ~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~----------------- 225 (456)
+-.|.|++.+.-+++++....|+.|-++-|+.+..+-.+....+-.|.++||.....+...+.
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 457999999999999999999999999999999999999999999999999976221110000
Q ss_pred -C-------------------Cchhhh------hhc----------C--------------------ChHHHHhhccccc
Q 012767 226 -G-------------------QDRDES------IVA----------L--------------------PVDELIEKADGFA 249 (456)
Q Consensus 226 -g-------------------~~~~~~------~~~----------~--------------------~~~~~~~~~~v~a 249 (456)
+ ...++. ... . ++|.+-.....|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 0 000000 000 0 0111111222689
Q ss_pred ccCchhHHHHHHHHhhcCCEEEEecCCCCch--hhhhhcCeeEEec
Q 012767 250 GVFPEHKYEIVKHLQARNHICGMIGNGVNDA--PALKKADIGIAVA 293 (456)
Q Consensus 250 ~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~--~aLk~AdvGIa~~ 293 (456)
+++|+.-.++|+.+|+.|.+|+.+|...|-. ..+.+|||+|++.
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD 1019 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALD 1019 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEec
Confidence 9999999999999999999999999998865 4568999999986
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00028 Score=67.36 Aligned_cols=124 Identities=13% Similarity=0.113 Sum_probs=81.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+-+.+|+.... ..++.+++. ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDTL-----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCcC-----------------CCCCCCHH
Confidence 47899999999999999999999999988888888888875321 111111100 01122232
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE-ecc----cc-HHHhhcccEEeeCCCchHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VAD----AT-DAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~~----~~-~~a~~aaDivl~~~~l~~i~~~i 319 (456)
-=..+++.+.-....++||||+.||+.|-+.|++... +.. .. ......+|+++. ++..+...+
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~~ 224 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNPA 224 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHHh
Confidence 2334555665556779999999999999999998743 321 11 122346888884 465555443
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00028 Score=66.49 Aligned_cols=105 Identities=12% Similarity=0.014 Sum_probs=74.4
Q ss_pred CCCcchHHHH-HHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC--CCCCCCccccCCchhhhhhcCChHHHHhhccccccc
Q 012767 175 PPIHDSAETI-RRALSLGLGVKMITGDQLAIAKETGRRLGMG--TNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 251 (456)
Q Consensus 175 ~~r~~~~~~I-~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~--~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~ 251 (456)
.+.|++.+.| +.+++.|++++++|+-....+..+++.+|+. .+.+ +.+.+....+ + -.-..|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i------~t~l~~~~tg--------~-~~g~~c 159 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLI------ASQMQRRYGG--------W-VLTLRC 159 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceE------EEEEEEEEcc--------E-ECCccC
Confidence 3589999999 5788899999999999999999999999962 2211 1111100000 0 001246
Q ss_pred CchhHHHHHHHH-hhcCCEEEEecCCCCchhhhhhcCeeEEecc
Q 012767 252 FPEHKYEIVKHL-QARNHICGMIGNGVNDAPALKKADIGIAVAD 294 (456)
Q Consensus 252 ~P~~K~~iV~~l-q~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~ 294 (456)
..+.|..-++.. ......+.+-||+.||.|||+.|+-+++++.
T Consensus 160 ~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 160 LGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred CChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 678888777654 3344566788999999999999999999963
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00023 Score=69.78 Aligned_cols=42 Identities=7% Similarity=0.018 Sum_probs=38.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 216 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~ 216 (456)
..-+.+.++|++|++.||.|++.||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 355678999999999999999999999999999999999864
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00079 Score=65.90 Aligned_cols=127 Identities=11% Similarity=0.065 Sum_probs=81.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC----------CCccccCCchhhhhhcCChHHHHh
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY----------PSSALSGQDRDESIVALPVDELIE 243 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~----------~~~~l~g~~~~~~~~~~~~~~~~~ 243 (456)
-++|||+.+.++.|++.|+++.++||-....+..+.+++|+..... ...++.|.. .
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~-~------------- 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK-G------------- 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC-C-------------
Confidence 4689999999999999999999999999999999999999852211 011111110 0
Q ss_pred hcccccccCchhHHHHHH-----HHh--hcCCEEEEecCCCCchhhhhhc---CeeEEec--cc-----cHHHhhcccEE
Q 012767 244 KADGFAGVFPEHKYEIVK-----HLQ--ARNHICGMIGNGVNDAPALKKA---DIGIAVA--DA-----TDAARSAADIV 306 (456)
Q Consensus 244 ~~~v~a~~~P~~K~~iV~-----~lq--~~g~~v~~iGDG~ND~~aLk~A---dvGIa~~--~~-----~~~a~~aaDiv 306 (456)
--+....|.+.+. .+. .....|+++|||.||+.|..-. .--+.+| +. -+.-.++=|||
T Consensus 186 -----P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Div 260 (277)
T TIGR01544 186 -----PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIV 260 (277)
T ss_pred -----CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEE
Confidence 0011134554433 222 2346799999999999996544 2233444 32 23346788999
Q ss_pred eeCCCchHHHHHH
Q 012767 307 LTEPGLNVIITAV 319 (456)
Q Consensus 307 l~~~~l~~i~~~i 319 (456)
|.++.=-.++..|
T Consensus 261 l~~D~t~~v~~~i 273 (277)
T TIGR01544 261 LVQDETLEVANSI 273 (277)
T ss_pred EECCCCchHHHHH
Confidence 9877644444444
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00089 Score=65.40 Aligned_cols=96 Identities=14% Similarity=0.071 Sum_probs=63.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++-|++.++++.|++.|+++.++||.....+..+-+.+|+..-.. ..++.+++. ....-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~~-----------------~~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDDV-----------------PAGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCcC-----------------CCCCCChH
Confidence 467899999999999999999999999988887777777643211 112221110 01111122
Q ss_pred hHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCe
Q 012767 255 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADI 288 (456)
Q Consensus 255 ~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~Adv 288 (456)
-=....+.+.-. ...++||||+.+|+.+-+.|++
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 222333444332 3569999999999999999997
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0011 Score=64.12 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=66.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+-+.+|+..... ..++.+++.. ...-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccCC-----------------CCCCCHH
Confidence 467899999999999999999999999999998888888864211 1222221100 1111222
Q ss_pred hHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCee
Q 012767 255 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG 289 (456)
Q Consensus 255 ~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvG 289 (456)
-=...++.+.-. ...++||||..+|+.+-+.|++-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 223334444432 44699999999999999999965
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00098 Score=65.52 Aligned_cols=121 Identities=12% Similarity=0.084 Sum_probs=79.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+-+.+|+..... .++.++. +. ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--~vi~~~~------------------~~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--VVQAGTP------------------IL--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--EEEecCC------------------CC--CCHH
Confidence 567999999999999999999999999999999999999853211 1111110 00 0011
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe-cc--ccH--HHhhcccEEeeCCCchHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-AD--ATD--AARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~-~~--~~~--~a~~aaDivl~~~~l~~i~~~i 319 (456)
-=..+++.+.-....++||||+.+|+.+-+.|++-... .. .+. .....+|+++ +++..+..++
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 11122233333345699999999999999999986432 22 122 2234688887 5577776654
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0009 Score=65.30 Aligned_cols=116 Identities=18% Similarity=0.095 Sum_probs=76.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+-..+|+..- -..++.+++.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF--FSVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh--CcEEEecccCC-----------------CCCCCHH
Confidence 4689999999999999999999999999999999999998531 11222221110 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE-Eec-cccHHHhhcccEEeeC
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AVA-DATDAARSAADIVLTE 309 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI-a~~-~~~~~a~~aaDivl~~ 309 (456)
-=...++.+.-....++||||..+|+.|-+.|++-. ++. ..+......+|+++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~ 226 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR 226 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC
Confidence 223344455444567999999999999999999843 332 2222233457887744
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0011 Score=64.07 Aligned_cols=117 Identities=12% Similarity=0.141 Sum_probs=78.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+-....+...-+.+|+..-. ..++.+++.. ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 46789999999999999999999999999999999999985321 1222222110 1122222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE-eccc-c-H-HHhhcccEEeeCC
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VADA-T-D-AARSAADIVLTEP 310 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~~~-~-~-~a~~aaDivl~~~ 310 (456)
--..+.+.+.-....++||||..+|+.+-++|++-.. +..+ . + .....+|+++.+.
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 2334455555455679999999999999999998643 2221 1 1 2234688888553
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00071 Score=63.86 Aligned_cols=106 Identities=11% Similarity=0.038 Sum_probs=73.0
Q ss_pred CCCcchHHHHH-HHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 175 PPIHDSAETIR-RALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~-~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
.++|++.++|+ .+++.|++++++|+-....+..+++..++.... .++ |.+.... .. .. -.-..|.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~---~~i-~t~le~~-~g---g~-----~~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL---NLI-ASQIERG-NG---GW-----VLPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC---cEE-EEEeEEe-CC---ce-----EcCccCCC
Confidence 46899999996 788899999999999999999999986652210 011 1111100 00 00 01124666
Q ss_pred hhHHHHHHHH-hhcCCEEEEecCCCCchhhhhhcCeeEEec
Q 012767 254 EHKYEIVKHL-QARNHICGMIGNGVNDAPALKKADIGIAVA 293 (456)
Q Consensus 254 ~~K~~iV~~l-q~~g~~v~~iGDG~ND~~aLk~AdvGIa~~ 293 (456)
++|..-++.. ......+.+-||+.||.|||+.||.+++++
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 8888777644 323345678899999999999999999996
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.001 Score=70.33 Aligned_cols=124 Identities=11% Similarity=0.055 Sum_probs=81.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.||+.++++.|++.|+++.++|+.....+..+.+.+|+..-. ..++.+++. ...-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v------------------~~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQI------------------NSLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCC------------------CCCCCcH
Confidence 67899999999999999999999999999999999999985321 112222110 0011222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee-EEecc--ccHHHhhcccEEeeCCCchHHHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD--ATDAARSAADIVLTEPGLNVIITAVLIS 322 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~--~~~~a~~aaDivl~~~~l~~i~~~i~~~ 322 (456)
-=...++.++ ...++|+||+.+|+.+-+.|++- |++.. ..+.....+|+++ +++..+..++...
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~~ 456 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILSTV 456 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHHH
Confidence 1112222222 35699999999999999999974 44432 2222234578887 4577777666543
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00095 Score=62.32 Aligned_cols=144 Identities=22% Similarity=0.305 Sum_probs=94.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCC-------ccccCCchhhhh------hcCChHHHH
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-------SALSGQDRDESI------VALPVDELI 242 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~-------~~l~g~~~~~~~------~~~~~~~~~ 242 (456)
+-|++.++.+.|++. ...+++|--...-+..+|..+|++...... ..+...+..+.+ ...+-+++.
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 568999999998765 445555666777889999999996422111 111111111111 112233444
Q ss_pred hhcc-cccccCchhHHHHHHHHhhc------------------CCEEEEecCCCCchhhhhhcC-ee-EEec-cccHHHh
Q 012767 243 EKAD-GFAGVFPEHKYEIVKHLQAR------------------NHICGMIGNGVNDAPALKKAD-IG-IAVA-DATDAAR 300 (456)
Q Consensus 243 ~~~~-v~a~~~P~~K~~iV~~lq~~------------------g~~v~~iGDG~ND~~aLk~Ad-vG-Ia~~-~~~~~a~ 300 (456)
++.+ +|.+..|..-.+|+..++.- ....+++||++.|+.||+.+. -| +|++ ||.+-|.
T Consensus 163 e~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYal 242 (315)
T COG4030 163 EKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYAL 242 (315)
T ss_pred HHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcccc
Confidence 4332 68888887666665555432 123688999999999999883 33 6666 8888888
Q ss_pred hcccEEeeCCCchHHHHHHH
Q 012767 301 SAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 301 ~aaDivl~~~~l~~i~~~i~ 320 (456)
..||+.+.+++...+..+|.
T Consensus 243 ~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 243 KEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccceEEeccchhhhhHHHH
Confidence 88999999999988888776
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0016 Score=72.68 Aligned_cols=61 Identities=18% Similarity=0.183 Sum_probs=47.2
Q ss_pred hhHHHHHHHHhhc--CCEEEEecCCCCchhhhhhc---CeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQAR--NHICGMIGNGVNDAPALKKA---DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~~--g~~v~~iGDG~ND~~aLk~A---dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
-+|+..++.+.+. ...++++||+.||.+||+.+ +.+|+||++ ..+|++++.++ ..+..++.
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHHH
Confidence 4799999888764 34799999999999999986 688888874 57888988754 44555443
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0016 Score=61.52 Aligned_cols=115 Identities=13% Similarity=0.137 Sum_probs=73.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+...-...|+.. + ..++.+++. ....-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~--~-~~i~~~~~~-----------------~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA--P-EVFVTAERV-----------------KRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC--c-cEEEEHHHh-----------------cCCCCCcH
Confidence 468999999999999999999999988776666666677631 1 112211100 01112222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee-EEecccc-HHHhhcccEEeeC
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADAT-DAARSAADIVLTE 309 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~~-~~a~~aaDivl~~ 309 (456)
-=....+.+.-....++||||..+|+.+-+.|++. |++..+. ......+|+++.+
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 22334444544457799999999999999999984 5554332 2223457777643
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0011 Score=61.74 Aligned_cols=39 Identities=28% Similarity=0.342 Sum_probs=35.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG 213 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lG 213 (456)
++.+.+.++|++|++.|++++++||.....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999998888754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00063 Score=63.19 Aligned_cols=94 Identities=19% Similarity=0.137 Sum_probs=65.8
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccC
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 252 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~ 252 (456)
.+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..-. ..++.++ ++...-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~------------------~~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWME------------------DCPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeec------------------CCCCCcC
Confidence 3446677899999999999999999999999999999999985311 1111111 1111223
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCCCchhhhhhc
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 286 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~A 286 (456)
|+--..+++.+.-....|+||||+.+|+.+-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 3333455566655566799999999999877654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0019 Score=60.86 Aligned_cols=98 Identities=16% Similarity=0.197 Sum_probs=66.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|++++++|+-....+....+.+|+..-. ..++.+++ .....|.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEecc-------------------CCCCCCC
Confidence 47899999999999999999999999888888888888875311 11111111 1112222
Q ss_pred h--HHHHHHHHhhcCCEEEEecCCC-CchhhhhhcCee-EEec
Q 012767 255 H--KYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAVA 293 (456)
Q Consensus 255 ~--K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvG-Ia~~ 293 (456)
. =..+.+.+.-....++||||.. +|+.+-++||+- |.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 1 1233344443445799999998 999999999874 4444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0015 Score=62.69 Aligned_cols=90 Identities=18% Similarity=0.202 Sum_probs=62.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCc----HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 249 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~----~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a 249 (456)
-.|.+++.++++.+++.|+++.++||.. ..++..+.+..|++...+-..++.|+.
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~--------------------- 171 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK--------------------- 171 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC---------------------
Confidence 3467889999999999999999999964 568888888899952211112222210
Q ss_pred ccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee
Q 012767 250 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 289 (456)
Q Consensus 250 ~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 289 (456)
..-.+|...+ ++.+ .++|+||..+|..+-+.|++-
T Consensus 172 -~~K~~K~~~l---~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 172 -PGQYTKTQWL---KKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred -CCCCCHHHHH---HhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 0113444433 3333 589999999999999999875
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0023 Score=63.39 Aligned_cols=110 Identities=14% Similarity=0.071 Sum_probs=75.9
Q ss_pred ccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccc
Q 012767 171 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 250 (456)
Q Consensus 171 ~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~ 250 (456)
...+++.|++.++++.|++.|++++++||.....+..+.+.+|+....+. .+.|.+. ...+.....-.+
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~---------~~~~~~~~~~~k 251 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPP---------DMHFQREQGDKR 251 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcc---------hhhhcccCCCCC
Confidence 35788999999999999999999999999999999999999988531111 1111110 000000000113
Q ss_pred cCchhHHHHHHHHhh-cCCEEEEecCCCCchhhhhhcCeeEE
Q 012767 251 VFPEHKYEIVKHLQA-RNHICGMIGNGVNDAPALKKADIGIA 291 (456)
Q Consensus 251 ~~P~~K~~iV~~lq~-~g~~v~~iGDG~ND~~aLk~AdvGIa 291 (456)
-.|+-+...++.+.. ....++|+||..+|+.+-+.|++...
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 345566666666543 34789999999999999999998743
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.00092 Score=59.60 Aligned_cols=98 Identities=19% Similarity=0.240 Sum_probs=68.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
.++.|++.++++.|++.|++++++|+..........+.+|+.. +...++...+. ....-.|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~--~f~~i~~~~~~-----------------~~~Kp~~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDD--YFDEIISSDDV-----------------GSRKPDP 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGG--GCSEEEEGGGS-----------------SSSTTSH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCccccccccccccccc--ccccccccchh-----------------hhhhhHH
Confidence 3578999999999999999999999999999999999999862 11122211110 0011111
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
+-=..+++.+.-....+++|||+..|+.+-+.||+.-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 2223455555555678999999999999999998753
|
... |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0024 Score=59.22 Aligned_cols=95 Identities=16% Similarity=0.189 Sum_probs=65.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+-+......+.+.+|+... + ..++..++ .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~-f-d~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP-F-DAVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh-h-heeEehhh-------------------cCCCCCC
Confidence 4679999999999999999999999998888888888997421 1 11111110 0111222
Q ss_pred h--HHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 255 H--KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 255 ~--K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
. =..+.+.+.-....+++|||+.+|+.+-+.||+-.
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 1 12334444444567999999999999999998763
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0018 Score=62.28 Aligned_cols=89 Identities=19% Similarity=0.188 Sum_probs=61.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGD----QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 250 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD----~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~ 250 (456)
.+.+++.++++.+++.|+++.++|+. ...++..+.+.+|+... + ..++.++... .
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~-f-~~i~~~d~~~-------------------~ 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM-N-PVIFAGDKPG-------------------Q 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh-e-eEEECCCCCC-------------------C
Confidence 35556999999999999999999998 66789999999999631 1 1122211100 0
Q ss_pred cCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee
Q 012767 251 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 289 (456)
Q Consensus 251 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 289 (456)
..| +|. ..+++.+ .++|+||..||..+-+.|++-
T Consensus 173 ~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 112 232 2344444 589999999999999999865
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0034 Score=62.13 Aligned_cols=117 Identities=18% Similarity=0.135 Sum_probs=71.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCC-ccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-SALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~-~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
++.|++.++++.|++.|+++.++|+-.......+-...+... .... .++.+++. ....-.|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v~~~~~-----------------~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVFAGDDV-----------------PKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEEecccc-----------------CCCCCCH
Confidence 578999999999999999999999988877766655543211 0110 11111100 0011112
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec-cc--cHHHhhcccEEeeC
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DA--TDAARSAADIVLTE 309 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~--~~~a~~aaDivl~~ 309 (456)
+-=..+++.+.-....++||||+.+|+.|-+.||+....- .+ .......+|+++.+
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 2223344555444567999999999999999999875543 22 11112357887743
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0022 Score=58.14 Aligned_cols=112 Identities=13% Similarity=0.018 Sum_probs=73.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
.++|+-++.++.+++.+++++++|+........+-..++=-...++..++..+..-.. .... .++. -.....-.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~--dg~h-~i~~---~~ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHI--DGQH-SIKY---TDDSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcC--CCce-eeec---CCccccCC
Confidence 3789999999999999999999999988888877776652111111111111100000 0000 0000 01133346
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
+|...|+.+.+....+.|+|||+.|..|-+.+|+=.|-
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 79999999999999999999999999988887766553
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0024 Score=60.77 Aligned_cols=99 Identities=12% Similarity=0.041 Sum_probs=66.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc-
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP- 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P- 253 (456)
++.|++.++++.|++.|+++.++|+-....+...-+.+|+..- + ..++.+++ +....|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~-f-d~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH-L-DLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH-C-CEEEEeee-------------------CCCCCCC
Confidence 5689999999999999999999999888888877777887421 1 11111110 111122
Q ss_pred -hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee--EEecc
Q 012767 254 -EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVAD 294 (456)
Q Consensus 254 -~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG--Ia~~~ 294 (456)
+-=..+.+.+.-....++||||..+|+.+-+.||+. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 111222333433455699999999999999999996 44544
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0025 Score=58.22 Aligned_cols=121 Identities=9% Similarity=0.057 Sum_probs=69.7
Q ss_pred cCeeeEEeeeecCCCCcCCCCCCceEeEecccCC----CCCcchHHHHHHHHhCCCeEEEEcCCcHH--------HHHHH
Q 012767 141 GLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFD----PPIHDSAETIRRALSLGLGVKMITGDQLA--------IAKET 208 (456)
Q Consensus 141 Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d----~~r~~~~~~I~~l~~~Gi~v~miTGD~~~--------~a~~i 208 (456)
|+|+|.+-..+ ++.|-..+.+ ++.|++.++++.|++.|+++.++|+.... .....
T Consensus 3 ~~~~~~~d~d~-------------~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~ 69 (173)
T PRK06769 3 NIQAIFIDRDG-------------TIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQE 69 (173)
T ss_pred CCcEEEEeCCC-------------cccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHH
Confidence 67777776544 3333322222 26799999999999999999999987631 12222
Q ss_pred HHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe
Q 012767 209 GRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI 288 (456)
Q Consensus 209 a~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv 288 (456)
.+..|+..- +......+++. ....-.|+-=..+++.+....+.++||||..+|+.+-+.|++
T Consensus 70 l~~~g~~~~-~~~~~~~~~~~-----------------~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi 131 (173)
T PRK06769 70 LKGFGFDDI-YLCPHKHGDGC-----------------ECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNA 131 (173)
T ss_pred HHhCCcCEE-EECcCCCCCCC-----------------CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCC
Confidence 334555310 00000000000 011112222234455554445679999999999999999988
Q ss_pred eEEe
Q 012767 289 GIAV 292 (456)
Q Consensus 289 GIa~ 292 (456)
-...
T Consensus 132 ~~i~ 135 (173)
T PRK06769 132 TTIL 135 (173)
T ss_pred eEEE
Confidence 6553
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.008 Score=55.06 Aligned_cols=127 Identities=20% Similarity=0.143 Sum_probs=69.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHH
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~---------------~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 240 (456)
+.||+.++++.|++.|+++.++|.... .....+-+.+|+. +...+.......+.
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~---f~~i~~~~~~~~~~-------- 98 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGR---LDGIYYCPHHPEDG-------- 98 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCc---cceEEECCCCCCCC--------
Confidence 579999999999999999999998762 1112223344542 11000000000000
Q ss_pred HHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE-eccccH---HHhhcc--cEEeeCCCchH
Q 012767 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VADATD---AARSAA--DIVLTEPGLNV 314 (456)
Q Consensus 241 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~~~~~---~a~~aa--Divl~~~~l~~ 314 (456)
.....-.|+--..+++.+.-....++||||+.+|+.+-+.|++..- +..+.. .....+ |+++ +++..
T Consensus 99 -----~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~e 171 (181)
T PRK08942 99 -----CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLAD 171 (181)
T ss_pred -----CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHH
Confidence 0011112222234445555455779999999999999999997432 222211 112234 7776 44666
Q ss_pred HHHHHH
Q 012767 315 IITAVL 320 (456)
Q Consensus 315 i~~~i~ 320 (456)
+..++.
T Consensus 172 l~~~l~ 177 (181)
T PRK08942 172 LPQALK 177 (181)
T ss_pred HHHHHH
Confidence 655543
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0055 Score=55.73 Aligned_cols=110 Identities=10% Similarity=0.105 Sum_probs=72.7
Q ss_pred HHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCc-HHHHHHHHHHhCC
Q 012767 136 KFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQ-LAIAKETGRRLGM 214 (456)
Q Consensus 136 ~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~-~~~a~~ia~~lGi 214 (456)
.+.+.|.+.+.+-+.. ++.-- =...+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+
T Consensus 19 ~~~~~~v~~vv~D~Dg-------------tl~~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 19 LLKKVGIKGVVLDKDN-------------TLVYP--DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred HHHHCCCCEEEEecCC-------------ccccC--CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 3456788888776543 11100 123567999999999999999999999987 5667777777776
Q ss_pred CCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchh--HHHHHHHHhhcCCEEEEecCCC-CchhhhhhcCeeE
Q 012767 215 GTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH--KYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGI 290 (456)
Q Consensus 215 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~--K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvGI 290 (456)
... +....|.. =..+.+.+.-....++||||.. .|+.+-+.|++-.
T Consensus 84 ~~~------------------------------~~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 84 PVL------------------------------PHAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred EEE------------------------------cCCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 310 11112221 1223333333345699999998 7999999998743
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0099 Score=60.94 Aligned_cols=120 Identities=16% Similarity=0.119 Sum_probs=79.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.||+.++++.|++.|+++.++|+.....+..+-+.+||..- -..++.+++.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y--Fd~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF--FSVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH--ceEEEecCcCC-----------------CCCCCHH
Confidence 4779999999999999999999999999999999999998531 11122111100 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe-ccccHHH-hhcccEEeeCCCchHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-ADATDAA-RSAADIVLTEPGLNVI 315 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~-~~~~~~a-~~aaDivl~~~~l~~i 315 (456)
-=...++.+.-....|+||||..+|+.|-+.|++-... ..+.... ...+|+++. ++..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~--s~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVR--RLDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEEC--CHHHH
Confidence 22344555555567899999999999999999985433 2322222 235788774 35544
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.005 Score=53.17 Aligned_cols=93 Identities=14% Similarity=0.149 Sum_probs=63.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc--------HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQ--------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 246 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~--------~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 246 (456)
++.|++.++++.|++.|+++.++|+.. ......+.+.+|+.... ....+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-------------------- 81 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-------------------- 81 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC--------------------
Confidence 578999999999999999999999988 67777888888874110 00100
Q ss_pred cccccCchhHHHHHHHHh-hcCCEEEEecC-CCCchhhhhhcCeeE
Q 012767 247 GFAGVFPEHKYEIVKHLQ-ARNHICGMIGN-GVNDAPALKKADIGI 290 (456)
Q Consensus 247 v~a~~~P~~K~~iV~~lq-~~g~~v~~iGD-G~ND~~aLk~AdvGI 290 (456)
.+..-.|+-=..+++.++ -....++|||| ..+|+.+-+.+++-.
T Consensus 82 ~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 82 HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 000111121123444442 44567999999 699999999988643
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.00096 Score=64.50 Aligned_cols=59 Identities=25% Similarity=0.379 Sum_probs=49.4
Q ss_pred cccCc--hhHHHHHHHHhhcCCEEEEecC----CCCchhhhhhc-CeeEEeccccHHHhhcccEEe
Q 012767 249 AGVFP--EHKYEIVKHLQARNHICGMIGN----GVNDAPALKKA-DIGIAVADATDAARSAADIVL 307 (456)
Q Consensus 249 a~~~P--~~K~~iV~~lq~~g~~v~~iGD----G~ND~~aLk~A-dvGIa~~~~~~~a~~aaDivl 307 (456)
.++.| -+|+.-++.|.+....|+++|| |.||.+||+.| -.|++++|+.+..+..+.+++
T Consensus 180 leI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 180 FDVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EEeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 35555 5799999999888888999999 99999999976 688888899999998876543
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0056 Score=57.52 Aligned_cols=119 Identities=10% Similarity=0.102 Sum_probs=74.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++. +++.++|+-....+..+.+.+|+..-. ..++.+.+ .....|.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~-------------------~~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSED-------------------AGIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCc-------------------cCCCCCC
Confidence 4689999999999999 999999999888888888889885321 11111110 0011232
Q ss_pred hH--HHHHHHH-hhcCCEEEEecCCC-CchhhhhhcCee-EEecc--ccHHHhhcccEEeeCCCchHHHH
Q 012767 255 HK--YEIVKHL-QARNHICGMIGNGV-NDAPALKKADIG-IAVAD--ATDAARSAADIVLTEPGLNVIIT 317 (456)
Q Consensus 255 ~K--~~iV~~l-q~~g~~v~~iGDG~-ND~~aLk~AdvG-Ia~~~--~~~~a~~aaDivl~~~~l~~i~~ 317 (456)
.. ...++.+ .-....++||||.. +|+.+-+.+|+. |.+.. .+......++.++ +++..+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 11 2333444 33345699999998 899999999973 33332 2212223456666 34555443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0067 Score=58.69 Aligned_cols=68 Identities=19% Similarity=0.189 Sum_probs=48.0
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHH-----Hhhc---cc-EEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDA-----ARSA---AD-IVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~-----a~~a---aD-ivl~~~~l~~i~~~i~ 320 (456)
..|...|+.|+++ ...|+++||+.||.+||..++-||.|+|+.+. .... .. ++-..+.-.+|.+.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 5699999998876 24688899999999999999999999998887 2222 22 3444566677777765
Q ss_pred H
Q 012767 321 I 321 (456)
Q Consensus 321 ~ 321 (456)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 3
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0031 Score=57.43 Aligned_cols=94 Identities=12% Similarity=0.068 Sum_probs=59.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++|+.|++.|+++.++|+... +..+.+.+|+.... ..++.+.+. ....-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEI-----------------KKGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhc-----------------CCCCCChH
Confidence 5779999999999999999999997532 34566777774221 111111100 01111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 289 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 289 (456)
-=..+.+.+.-....++||||..+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 11233344433345699999999999999999875
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0044 Score=56.44 Aligned_cols=94 Identities=12% Similarity=0.159 Sum_probs=60.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
-++.|++.++++.|++.|+++.++|+. ..+..+-+.+|+..-. ..++.+.+ .....|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~-------------------~~~~kp 143 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADE-------------------VKEGKP 143 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhh-------------------CCCCCC
Confidence 357899999999999999999999987 5566777778874211 11111100 001122
Q ss_pred hhH--HHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 254 EHK--YEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 254 ~~K--~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
... ..+.+.+.-....++||||+.+|+.+-+.|++..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 211 1223333333456999999999999999998753
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0069 Score=54.85 Aligned_cols=95 Identities=15% Similarity=0.173 Sum_probs=61.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+-.... ..+..++|+... + ..++.+.+. ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~-f-~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL-F-DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH-C-CEEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988777 555555777421 1 111111100 01111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 289 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 289 (456)
-=..+.+.+.-....++++||...|+.+-+++++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 22334444444457799999999999999998873
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.022 Score=58.43 Aligned_cols=67 Identities=24% Similarity=0.239 Sum_probs=47.6
Q ss_pred ccCch---hHHHHHHHHhhc-C-----C-EEEEecCCCCchhhhhh-----cCeeEEeccccHHHhhcccEEeeCCCchH
Q 012767 250 GVFPE---HKYEIVKHLQAR-N-----H-ICGMIGNGVNDAPALKK-----ADIGIAVADATDAARSAADIVLTEPGLNV 314 (456)
Q Consensus 250 ~~~P~---~K~~iV~~lq~~-g-----~-~v~~iGDG~ND~~aLk~-----AdvGIa~~~~~~~a~~aaDivl~~~~l~~ 314 (456)
++.|. +|...|+.+.+. | . .++++||+.||..||+. +++||+|+++... ..|++.|.+ -..
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~--t~A~y~L~d--p~e 368 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKE--SNAFYSLRD--PSE 368 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCC--ccceEEcCC--HHH
Confidence 45564 899988887655 2 1 25899999999999996 6999999876542 356777744 555
Q ss_pred HHHHHH
Q 012767 315 IITAVL 320 (456)
Q Consensus 315 i~~~i~ 320 (456)
+..++.
T Consensus 369 V~~~L~ 374 (384)
T PLN02580 369 VMEFLK 374 (384)
T ss_pred HHHHHH
Confidence 554443
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.013 Score=55.27 Aligned_cols=123 Identities=12% Similarity=0.105 Sum_probs=73.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|+ .|+++.++|+.....+...-+.+|+..- + ..++.+++. ....-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~-f-d~v~~~~~~-----------------~~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDY-F-DLLVISEQV-----------------GVAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHH-c-CEEEEECcc-----------------CCCCCCHH
Confidence 36799999999999 6899999999888888887788887421 1 111111100 00111111
Q ss_pred hHHHHHHHHhhc-CCEEEEecCCC-CchhhhhhcCee-EEec-cccH-HHhhcccEEeeCCCchHHHHHH
Q 012767 255 HKYEIVKHLQAR-NHICGMIGNGV-NDAPALKKADIG-IAVA-DATD-AARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~iV~~lq~~-g~~v~~iGDG~-ND~~aLk~AdvG-Ia~~-~~~~-~a~~aaDivl~~~~l~~i~~~i 319 (456)
-=..+++.+.-. ...++||||.. +|+.+-+.|++- |.+. .+.. .....+|+++ +++..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 112334444322 24699999998 799999999985 4443 2211 1112467776 4466665543
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.012 Score=60.71 Aligned_cols=116 Identities=18% Similarity=0.192 Sum_probs=72.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH-HhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR-RLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~-~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
++.|++.++++.|++.|+++.|+|+.....+..... ..|+.... ..++.+++. ....-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v-----------------~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEV-----------------EKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhc-----------------CCCCCCH
Confidence 367999999999999999999999998877766554 56764211 111111100 0111122
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE-eccc--cHHHhhcccEEeeC
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VADA--TDAARSAADIVLTE 309 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~~~--~~~a~~aaDivl~~ 309 (456)
+-=..+++.+.-....|+||||+.+|+.+-+.||+... +..+ .......+|.++.+
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCC
Confidence 22234445554446679999999999999999998743 3322 22233456666633
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.019 Score=52.47 Aligned_cols=112 Identities=8% Similarity=-0.044 Sum_probs=70.5
Q ss_pred eEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHh
Q 012767 165 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 243 (456)
Q Consensus 165 ~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD-~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 243 (456)
.......-.-++.|++.++++.|++.|+++.++|+- ....+..+...+|+..... ...+.+...
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd 99 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD 99 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce
Confidence 344555556678899999999999999999999976 8888888888888741000 000000000
Q ss_pred hcccccccCchhH--HHHHHHHhhc------CCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 244 KADGFAGVFPEHK--YEIVKHLQAR------NHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 244 ~~~v~a~~~P~~K--~~iV~~lq~~------g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
. .+.+.-.+..| ..+.+.+.+. ...++||||...|+.+-++|++-...
T Consensus 100 ~-iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 100 D-RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred e-eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 0 01111111112 2344544432 35699999999999999999886654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.036 Score=49.83 Aligned_cols=102 Identities=14% Similarity=0.136 Sum_probs=65.1
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH---HHHHHh---C--CCCCCCCCccc--cCCchhhhhhcCChHHHH
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK---ETGRRL---G--MGTNMYPSSAL--SGQDRDESIVALPVDELI 242 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~---~ia~~l---G--i~~~~~~~~~l--~g~~~~~~~~~~~~~~~~ 242 (456)
+|.+.|+++++++++++.|++++++||.....+. .....+ | ++. ..++ +|..... ..
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g~~~~~-~~-------- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPDRLFAA-LH-------- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCCcchhh-hh--------
Confidence 4677899999999999999999999999988774 444442 2 321 1111 1111100 00
Q ss_pred hhcccccccCchhHHHHHHHHhh-----cCCEEEEecCCCCchhhhhhcCee
Q 012767 243 EKADGFAGVFPEHKYEIVKHLQA-----RNHICGMIGNGVNDAPALKKADIG 289 (456)
Q Consensus 243 ~~~~v~a~~~P~~K~~iV~~lq~-----~g~~v~~iGDG~ND~~aLk~AdvG 289 (456)
. .+..+-.-+.|.+.++.+.+ ....++.+|++.+|+.+.++++|.
T Consensus 92 -~-e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 92 -R-EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -c-ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 0 11112122347777777766 345677899999999999998765
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.0084 Score=53.19 Aligned_cols=95 Identities=14% Similarity=-0.031 Sum_probs=64.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++||++.++++.|+ .++++.++|.-....+..+-+.+++... +...++.+++. ....|.
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~-------------------~~~KP~ 103 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDEC-------------------VFVKGK 103 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECccc-------------------cccCCe
Confidence 47999999999998 5799999999999999999999887421 11112221111 011121
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 291 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa 291 (456)
=...++.+......|+||||..+|..+-+.++|-|.
T Consensus 104 -~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 -YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred -EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 011233344446679999999999998888866654
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.019 Score=52.32 Aligned_cols=121 Identities=15% Similarity=0.129 Sum_probs=63.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH---------------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHH
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLA---------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~---------------~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 240 (456)
+.|++.++|+.|++.|+++.++|.-... ....+....|+.-. ..........+ .. .+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~i~~~~~~~~~-~~--~~~- 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD---GIYYCPHHPEG-VE--EFR- 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc---EEEECCCCCcc-cc--ccc-
Confidence 5689999999999999999999976531 11122333333210 00000000000 00 000
Q ss_pred HHhhcccccccCch--hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee--EEeccccH---HHhhcccEEee
Q 012767 241 LIEKADGFAGVFPE--HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVADATD---AARSAADIVLT 308 (456)
Q Consensus 241 ~~~~~~v~a~~~P~--~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG--Ia~~~~~~---~a~~aaDivl~ 308 (456)
.-.....|. -=....+.+.-....++||||..+|+.+-+.|++. |.+..+.. .....+|+++.
T Consensus 100 -----~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~ 169 (176)
T TIGR00213 100 -----QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLN 169 (176)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEec
Confidence 000011222 11223333333456799999999999999999985 34433221 11234788874
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.014 Score=52.71 Aligned_cols=98 Identities=11% Similarity=0.085 Sum_probs=59.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc---------------HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChH
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQ---------------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 239 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~---------------~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 239 (456)
++-|++.++++.|++.|+++.++|.-. ......+...+|+. +...++......+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~ii~~~~~~~~-------- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII---FDDVLICPHFPDD-------- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc---eeEEEECCCCCCC--------
Confidence 356899999999999999999999852 33455666777774 1111110000000
Q ss_pred HHHhhcccccccCchhHHHHHHHH----hhcCCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 240 ELIEKADGFAGVFPEHKYEIVKHL----QARNHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 240 ~~~~~~~v~a~~~P~~K~~iV~~l----q~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
+ +....|. .+++..+ ......++||||+.+|+.+-+.|++....
T Consensus 98 ------~-~~~~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 98 ------N-CDCRKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred ------C-CCCCCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 0 0011222 2333332 22234699999999999999999887543
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.012 Score=52.07 Aligned_cols=98 Identities=16% Similarity=0.173 Sum_probs=59.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChH
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 239 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~---------------~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 239 (456)
++.|++.++++.|++.|+++.++|+... .....+.+.+|+.... ..+......
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~~~~~--------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG---VLFCPHHPA--------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE---EEECCCCCC---------
Confidence 4689999999999999999999998762 3455566777774110 000000000
Q ss_pred HHHhhcccccccCchhH--HHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 240 ELIEKADGFAGVFPEHK--YEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 240 ~~~~~~~v~a~~~P~~K--~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
.......|+.+ ..+++.+.-....++||||...|+.+-+.+++-.
T Consensus 95 ------~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 95 ------DNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 00000122211 2233333333466999999999999999988753
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.018 Score=50.82 Aligned_cols=90 Identities=20% Similarity=0.235 Sum_probs=56.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchh
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 255 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 255 (456)
..+++.++++.|++.|+++.++|+-....+....+.. +... + ..++..+ ++...-.|+-
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~~i~~~~------------------~~~~Kp~~~~ 123 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-DLILGSD------------------EFGAKPEPEI 123 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-cEEEecC------------------CCCCCcCHHH
Confidence 3479999999999999999999999988888777765 3211 1 1111100 0111111211
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCchhhhhhcC
Q 012767 256 KYEIVKHLQARNHICGMIGNGVNDAPALKKAD 287 (456)
Q Consensus 256 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Ad 287 (456)
=..+.+.+.-.. .+++|||..+|+.+-+.|+
T Consensus 124 ~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 122333343334 7999999999998888764
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.017 Score=53.66 Aligned_cols=95 Identities=15% Similarity=0.116 Sum_probs=58.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++-|++.++++.|++.|+++.++|+-... .....+.+|+... + ..++...+. ....-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~-f-d~i~~s~~~-----------------~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY-F-DFVVTSYEV-----------------GAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh-c-ceEEeeccc-----------------CCCCCCHH
Confidence 56789999999999999999999986553 4566677777421 1 111111000 00111111
Q ss_pred hHHHHHHHHhhcCCEEEEecCCC-CchhhhhhcCee
Q 012767 255 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 289 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvG 289 (456)
-=..+++.+.-....++||||+. +|+.+-++||+-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 11223344443456799999997 899998988764
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.051 Score=48.75 Aligned_cols=113 Identities=10% Similarity=0.173 Sum_probs=79.9
Q ss_pred HHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH
Q 012767 131 NAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR 210 (456)
Q Consensus 131 ~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~ 210 (456)
+-..+.+..+|.+.+.+-.+. +++..= ....-|++++=+..++.+|+++.++|.-+...+...+.
T Consensus 17 ~i~~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~ 81 (175)
T COG2179 17 DITPDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAE 81 (175)
T ss_pred hCCHHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhh
Confidence 334678899999999886654 433321 12345788888999999999999999999999999999
Q ss_pred HhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhh---cCCEEEEecCCC-Cchhhhhhc
Q 012767 211 RLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQA---RNHICGMIGNGV-NDAPALKKA 286 (456)
Q Consensus 211 ~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~---~g~~v~~iGDG~-ND~~aLk~A 286 (456)
.+|++- ++.-..|-.+ .+-+++++ ....|+||||.. .|+.+=+.+
T Consensus 82 ~l~v~f------------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~ 130 (175)
T COG2179 82 KLGVPF------------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRA 130 (175)
T ss_pred hcCCce------------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhccccc
Confidence 999851 1222223322 34444444 456799999985 888877777
Q ss_pred Cee
Q 012767 287 DIG 289 (456)
Q Consensus 287 dvG 289 (456)
++-
T Consensus 131 G~~ 133 (175)
T COG2179 131 GMR 133 (175)
T ss_pred CcE
Confidence 654
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.047 Score=52.29 Aligned_cols=101 Identities=20% Similarity=0.255 Sum_probs=66.3
Q ss_pred CCCcchHHHHHHH--HhCCCeEEEEcCCcHHHHHHHHHHhCCCCCC---C-CCccccCCchhhhhhcCChHHHHhhcccc
Q 012767 175 PPIHDSAETIRRA--LSLGLGVKMITGDQLAIAKETGRRLGMGTNM---Y-PSSALSGQDRDESIVALPVDELIEKADGF 248 (456)
Q Consensus 175 ~~r~~~~~~I~~l--~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~---~-~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ 248 (456)
|+.|+.+++++.+ +..|+.+.++|.-+.-.-..+-+.-|+.... + +...+..+. .+.-.+.. .+.+
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G---~l~v~pyh-----~h~C 142 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADG---RLRVRPYH-----SHGC 142 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCc---eEEEeCcc-----CCCC
Confidence 5678999999999 5689999999999999889999998885321 1 111111100 00000000 0223
Q ss_pred cccCc-hhHHHHHHHHhhc----C---CEEEEecCCCCch-hhh
Q 012767 249 AGVFP-EHKYEIVKHLQAR----N---HICGMIGNGVNDA-PAL 283 (456)
Q Consensus 249 a~~~P-~~K~~iV~~lq~~----g---~~v~~iGDG~ND~-~aL 283 (456)
..+.| -=|..+++.+++. | ..|.+||||.||. |++
T Consensus 143 ~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 143 SLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPAL 186 (234)
T ss_pred CcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence 44444 3599999888765 3 6899999999997 444
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.083 Score=50.74 Aligned_cols=48 Identities=17% Similarity=0.255 Sum_probs=37.8
Q ss_pred EecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH--HHHHHhCCC
Q 012767 168 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK--ETGRRLGMG 215 (456)
Q Consensus 168 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~--~ia~~lGi~ 215 (456)
|.+.-...+-|++.++++.|+++|+++.++|.-...... ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 455556778899999999999999999999996554443 456778875
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.069 Score=52.21 Aligned_cols=87 Identities=13% Similarity=0.078 Sum_probs=59.2
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccc
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 249 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~---a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a 249 (456)
..++-|++.++++.|++.|+++.++|+..... +...-+..|++...... ++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~-------------------------lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEH-------------------------LLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcce-------------------------EEe
Confidence 45578999999999999999999999987433 34555667875321111 111
Q ss_pred ccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhh
Q 012767 250 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 284 (456)
Q Consensus 250 ~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk 284 (456)
+-....|....+.+.+...+++++||-.+|.....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 11123455666666666677999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.012 Score=64.21 Aligned_cols=40 Identities=10% Similarity=0.133 Sum_probs=36.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 215 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~ 215 (456)
.-+.+.++|++|+++|+.+++.||.....+..+.+.+|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3357799999999999999999999999999999999874
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.038 Score=52.22 Aligned_cols=101 Identities=12% Similarity=0.171 Sum_probs=58.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH-HHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAK-ETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~-~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
++.|++.++|+.|++.|+++.++||-...... .+.+..++.. +-..++.+++.+ . ....-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~--~f~~i~~~~~~~--~-------------~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS--LMHHVVTGDDPE--V-------------KQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh--hCCEEEECChhh--c-------------cCCCCCc
Confidence 46799999999999999999999997764332 2222223321 001111111000 0 0001112
Q ss_pred hhHHHHHHHHh---hcCCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 254 EHKYEIVKHLQ---ARNHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 254 ~~K~~iV~~lq---~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
+-=...++.+. -....|+||||+..|+.|-+.|++....
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~ 182 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVM 182 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEE
Confidence 21123344443 2246699999999999999999986543
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.039 Score=56.14 Aligned_cols=99 Identities=10% Similarity=0.053 Sum_probs=59.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCCh
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 238 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD---------------~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~ 238 (456)
-++.|++.++++.|++.|+++.|+|+- .......+.+..|+. +....+......+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~---fd~i~i~~~~~sd------- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK---FDEVLICPHFPED------- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc---eeeEEEeCCcCcc-------
Confidence 357899999999999999999999983 123445566666663 1111111000000
Q ss_pred HHHHhhcccccccCchhHHHHHHHH----hhcCCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 239 DELIEKADGFAGVFPEHKYEIVKHL----QARNHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 239 ~~~~~~~~v~a~~~P~~K~~iV~~l----q~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
+..+ ..|+ ..++..+ .-....++||||+.+|..+-+.|++-...
T Consensus 99 -------~~~~-rKP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~ 146 (354)
T PRK05446 99 -------NCSC-RKPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIR 146 (354)
T ss_pred -------cCCC-CCCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEE
Confidence 0001 1222 2233322 22346799999999999999999987543
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.03 Score=53.98 Aligned_cols=64 Identities=20% Similarity=0.229 Sum_probs=46.3
Q ss_pred CchhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhc--------CeeEEeccccHHHhhcccEEeeCCCchHHHHHH
Q 012767 252 FPEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKA--------DIGIAVADATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 252 ~P~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~A--------dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
.+.+|...++.+.++ ...++|+||+.||.+|++.+ ..||+|+.+ ..+..|++++. +...+..++
T Consensus 164 ~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g--~~~~~A~~~~~--~~~~v~~~L 239 (244)
T TIGR00685 164 RFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG--SKKTVAKFHLT--GPQQVLEFL 239 (244)
T ss_pred CCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC--CcCCCceEeCC--CHHHHHHHH
Confidence 345788887776654 34799999999999999999 578888533 24567888885 455555444
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.11 Score=59.08 Aligned_cols=37 Identities=8% Similarity=-0.020 Sum_probs=31.2
Q ss_pred CCCcchHHHHHHH-HhCCCeEEEEcCCcHHHHHHHHHH
Q 012767 175 PPIHDSAETIRRA-LSLGLGVKMITGDQLAIAKETGRR 211 (456)
Q Consensus 175 ~~r~~~~~~I~~l-~~~Gi~v~miTGD~~~~a~~ia~~ 211 (456)
.|-+++.+++++| ++.|+.|+++||.........-..
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 5667899999997 788999999999999888766543
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.11 Score=60.44 Aligned_cols=125 Identities=16% Similarity=0.211 Sum_probs=79.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc--
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP-- 253 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P-- 253 (456)
+.|++.+.++.|+++|+++.++|+-....+...-+.+|+....+ ..++.+++ +....|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F-d~iv~~~~-------------------~~~~KP~P 221 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF-DAIVSADA-------------------FENLKPAP 221 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC-CEEEECcc-------------------cccCCCCH
Confidence 57899999999999999999999999988888888898852111 11121111 111122
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee-EEeccc---cHHHhhcccEEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA---TDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~---~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
+-=...++.+.-....++||||..+|+.+-+.|++- |++..+ .+.....+|+++.+..--.+..++.
T Consensus 222 e~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~ 292 (1057)
T PLN02919 222 DIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILT 292 (1057)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHh
Confidence 211334455554556799999999999999999984 333322 2233456778875533223344433
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.066 Score=50.89 Aligned_cols=100 Identities=14% Similarity=0.103 Sum_probs=64.5
Q ss_pred cCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC---CCCCCCCCccccCCchhhhhhcCChHHHHhhcccc
Q 012767 172 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG---MGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 248 (456)
Q Consensus 172 l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lG---i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ 248 (456)
+.-++.||+.++++.|++.|+++.++|.........+-+..+ +..- +. ..+ + ..+.
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-f~-~~f--------------d-----~~~g 150 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-FS-GYF--------------D-----TTVG 150 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-cc-eEE--------------E-----eCcc
Confidence 345689999999999999999999999988776666655542 2110 00 000 0 0001
Q ss_pred cccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 249 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 249 a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
..-.|+-=..+++.+.-....++|+||...|+.|-++||+-...
T Consensus 151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 11112222344555544456799999999999999999987544
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.54 Score=48.00 Aligned_cols=63 Identities=10% Similarity=0.030 Sum_probs=45.3
Q ss_pred HHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCC--CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH
Q 012767 133 VINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFD--PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG 209 (456)
Q Consensus 133 ~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d--~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia 209 (456)
.+..++....+.+++-|++ +++-+..-.| .+-+++.++|++|. .|+.|.++||........+.
T Consensus 102 ~~~~~~~~k~~llflD~DG-------------TL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 102 QIMEASRGKQIVMFLDYDG-------------TLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred HHHHHhcCCCeEEEEecCC-------------cCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 3444555555666665654 6665554333 36789999999999 78999999999999888773
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.1 Score=47.25 Aligned_cols=94 Identities=6% Similarity=-0.004 Sum_probs=57.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH------------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHh
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLA------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 243 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~------------~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 243 (456)
+-|++.++++.|++.|+++.++|..... .+..+.+.+|+.. ..++.+...
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~~~-------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATHAG-------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecCCC--------------
Confidence 3489999999999999999999975542 3456677888742 111111100
Q ss_pred hcccccccCchhHHHHHHHHh--hcCCEEEEecCCC--------CchhhhhhcCeeE
Q 012767 244 KADGFAGVFPEHKYEIVKHLQ--ARNHICGMIGNGV--------NDAPALKKADIGI 290 (456)
Q Consensus 244 ~~~v~a~~~P~~K~~iV~~lq--~~g~~v~~iGDG~--------ND~~aLk~AdvGI 290 (456)
.+..-.|+-=..+.+.+. -....++||||.. +|+.+-++|++-.
T Consensus 105 ---~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 ---LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ---CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000111111123333333 2335699999986 6999988887653
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.1 Score=45.07 Aligned_cols=39 Identities=10% Similarity=0.103 Sum_probs=34.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHHHhC
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLG 213 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD-~~~~a~~ia~~lG 213 (456)
++.+++.++++.|++.|+++.++|+- ....+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 7777777666666
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.064 Score=50.47 Aligned_cols=97 Identities=12% Similarity=0.177 Sum_probs=62.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.| ++++.++|+.....+...-+..|+.... +..++.+.+.. ...-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 4568999999988 5999999999888888777788875321 11112111000 0011122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
-=..+.+.+.-....|+||||..+|+.+-+.||+....
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 22233344443345699999999999999999988753
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.11 Score=43.04 Aligned_cols=48 Identities=21% Similarity=0.304 Sum_probs=35.8
Q ss_pred EecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHhCCC
Q 012767 168 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 215 (456)
Q Consensus 168 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia---~~lGi~ 215 (456)
|++...+.+=|++.++|+.|++.|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 455567778899999999999999999999998866555444 556764
|
... |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.077 Score=49.54 Aligned_cols=98 Identities=11% Similarity=0.043 Sum_probs=56.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHH--HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccccc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAI--AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 251 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~--a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~ 251 (456)
-++.|++.++++.|++.|+++.++|...... ........++... ++ .++...+ .....-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~-fd-~v~~s~~-----------------~~~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL-FD-AVVESCL-----------------EGLRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh-CC-EEEEeee-----------------cCCCCC
Confidence 3578999999999999999999999865432 2222222333210 00 0000000 000111
Q ss_pred CchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 252 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 252 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
.|+-=..+++.+.-....++||||...|+.+-++||+-.
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 122112333444434466999999999999999998853
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.12 Score=48.36 Aligned_cols=139 Identities=17% Similarity=0.275 Sum_probs=80.9
Q ss_pred hhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCC-eEEEEcCCcHHHH
Q 012767 127 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GVKMITGDQLAIA 205 (456)
Q Consensus 127 ~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi-~v~miTGD~~~~a 205 (456)
.+.....++++.++|.|.--+. -+.=.=|+-|+..++|+.+++.|- .++++|--|.-..
T Consensus 56 ne~M~rv~k~Lheqgv~~~~ik--------------------~~~r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFI 115 (256)
T KOG3120|consen 56 NELMDRVFKELHEQGVRIAEIK--------------------QVLRSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFI 115 (256)
T ss_pred HHHHHHHHHHHHHcCCCHHHHH--------------------HHHhcCCCCccHHHHHHHHHhCCCceEEEEecCchhHH
Confidence 3455667778888886643221 111122567899999999999996 9999999998888
Q ss_pred HHHHHHhCCCCC---CC-CCccccCCchhhhhhcCChHHHHhhcccccccCchh--HHHHHHHHhhc-------CCEEEE
Q 012767 206 KETGRRLGMGTN---MY-PSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH--KYEIVKHLQAR-------NHICGM 272 (456)
Q Consensus 206 ~~ia~~lGi~~~---~~-~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~--K~~iV~~lq~~-------g~~v~~ 272 (456)
..+-+..|+..- ++ +...+.... .+.-.+.. ..--|...|.. |..++..++.. ...+.+
T Consensus 116 e~~Lea~~~~d~F~~IfTNPa~~da~G---~L~v~pyH-----~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iY 187 (256)
T KOG3120|consen 116 EEILEAAGIHDLFSEIFTNPACVDASG---RLLVRPYH-----TQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIY 187 (256)
T ss_pred HHHHHHccHHHHHHHHhcCCcccCCCC---cEEeecCC-----CCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEE
Confidence 888888776421 00 000000000 00000000 00113334443 66666655433 237999
Q ss_pred ecCCCCch-hhhhhcCeeEEec
Q 012767 273 IGNGVNDA-PALKKADIGIAVA 293 (456)
Q Consensus 273 iGDG~ND~-~aLk~AdvGIa~~ 293 (456)
+|||.||. |+++....-+||-
T Consensus 188 vGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 188 VGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred EcCCCCCcCcchhcccCceecc
Confidence 99999996 7777666666664
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.13 Score=49.05 Aligned_cols=88 Identities=18% Similarity=0.273 Sum_probs=55.5
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccc
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 249 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~---a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a 249 (456)
.-|+-|++.++++.|++.|++|+++||..... +..--++.|++. +...++.+.+. .
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d-------------------~ 176 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLED-------------------S 176 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCC-------------------C
Confidence 34778999999999999999999999999755 333334567652 11122221000 0
Q ss_pred ccC-chhHHHHHHHHhhcCC-EEEEecCCCCchh
Q 012767 250 GVF-PEHKYEIVKHLQARNH-ICGMIGNGVNDAP 281 (456)
Q Consensus 250 ~~~-P~~K~~iV~~lq~~g~-~v~~iGDG~ND~~ 281 (456)
+.+ .+-|.+.-+.+.+.|+ +++.+||-.+|..
T Consensus 177 ~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 177 NKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred CchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 000 1126666666666655 5777999999874
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.19 Score=46.61 Aligned_cols=95 Identities=8% Similarity=-0.016 Sum_probs=57.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH-HHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG-RRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia-~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
++.|++.++++.|++.|+++.++|.-+.......- ...++... + ..++...+ +....|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~-------------------~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-A-DHIYLSQD-------------------LGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-c-CEEEEecc-------------------cCCCCC
Confidence 46899999999999999999999997765443322 11233210 0 00111000 001122
Q ss_pred h--hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 254 E--HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 254 ~--~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
. -=..+++.+.-....+++|||...|+.+-++||+-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 1 112334444444567999999999999999998854
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.24 Score=49.83 Aligned_cols=91 Identities=13% Similarity=0.060 Sum_probs=66.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH----hCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR----LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 250 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~----lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~ 250 (456)
++.+++.++|+.|++.|+.+.++|.-+...+..+-+. +|+.... .+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 3578999999999999999999999999999988887 6664210 0011
Q ss_pred cCchhHHHHHHH----HhhcCCEEEEecCCCCchhhhhhcCeeEEec
Q 012767 251 VFPEHKYEIVKH----LQARNHICGMIGNGVNDAPALKKADIGIAVA 293 (456)
Q Consensus 251 ~~P~~K~~iV~~----lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~ 293 (456)
..+..|.+.++. +.-....++||||...|..+.+.+...+.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 223344444433 3333467999999999999999988876553
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.33 Score=45.61 Aligned_cols=38 Identities=16% Similarity=0.123 Sum_probs=34.0
Q ss_pred chHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 012767 179 DSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 216 (456)
Q Consensus 179 ~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~ 216 (456)
.+.+.+.+|+++|++|+.+|......-..+-+.+|+..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 46789999999999999999999888888989999873
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.59 E-value=0.27 Score=44.82 Aligned_cols=91 Identities=14% Similarity=0.149 Sum_probs=58.8
Q ss_pred hHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHH
Q 012767 180 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEI 259 (456)
Q Consensus 180 ~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~i 259 (456)
..+++..|++. +++.++|+.....+...-+.+|+.... ..++.+++. ....-.|+-=...
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-----------------~~~KP~p~~~~~~ 151 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDV-----------------QHHKPAPDTFLRC 151 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhc-----------------cCCCCChHHHHHH
Confidence 36889998765 899999999999999988999985321 112211110 0111112222333
Q ss_pred HHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 260 VKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 260 V~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
.+.++-....|++|||..+|+.+-+.||+-.
T Consensus 152 ~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 152 AQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 4444444456999999999999999998753
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=92.27 E-value=0.22 Score=45.35 Aligned_cols=98 Identities=11% Similarity=0.072 Sum_probs=61.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.+++.++++.|+ .++.++|+-....+....+.+|+... ++ .++.+.+.... ..++.-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~-fd-~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC-FD-GIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh-hC-eEEEeecccCc-------------cCCCCCCHH
Confidence 36789999999987 47899999988888888899998531 11 11111100000 000011122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
-=..+++.+......++||||...|+.+-+.||+..
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 223444555555677999999999999999988753
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.64 Score=42.23 Aligned_cols=107 Identities=16% Similarity=0.153 Sum_probs=78.1
Q ss_pred HHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCe--EEEEcCC-------cHHHHHH
Q 012767 137 FAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLG--VKMITGD-------QLAIAKE 207 (456)
Q Consensus 137 ~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~--v~miTGD-------~~~~a~~ 207 (456)
+.+.|.+.+.+-.+. ++ ...=++.+-|+..+.+++|++.+.. |+++|.- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 677888888775543 11 1134677889999999999998874 9999986 4788999
Q ss_pred HHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhc-----CCEEEEecCCC-Cchh
Q 012767 208 TGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGV-NDAP 281 (456)
Q Consensus 208 ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~-----g~~v~~iGDG~-ND~~ 281 (456)
+.+.+|++- -.+....|.-..++.+.++.+ .+.++||||-. .|+-
T Consensus 101 ~~~~lgIpv-----------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-----------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-----------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999851 013345676666788888755 56799999974 7877
Q ss_pred hhhhcC
Q 012767 282 ALKKAD 287 (456)
Q Consensus 282 aLk~Ad 287 (456)
+=...+
T Consensus 152 ~gN~~G 157 (168)
T PF09419_consen 152 MGNRMG 157 (168)
T ss_pred HhhccC
Confidence 666655
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=91.73 E-value=0.41 Score=47.92 Aligned_cols=48 Identities=25% Similarity=0.304 Sum_probs=37.7
Q ss_pred EecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHhCCC
Q 012767 168 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 215 (456)
Q Consensus 168 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia---~~lGi~ 215 (456)
|++.-.+.+=|++.++|+.|++.|++++++|+....+...+. +.+|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 444445566799999999999999999999999977666666 456663
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=91.45 E-value=0.41 Score=44.09 Aligned_cols=93 Identities=11% Similarity=0.053 Sum_probs=54.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCC--CCCccccCCchhhhhhcCChHHHHhhcccccccC
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM--YPSSALSGQDRDESIVALPVDELIEKADGFAGVF 252 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~--~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~ 252 (456)
++.|++.++++.|++.+ +.+++|.-+.......-+.+|+..-. +-..++.++ ...
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~----------------------~~~ 130 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCG----------------------HDE 130 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEec----------------------cCc
Confidence 36889999999999875 56677765544444444556653100 000111110 111
Q ss_pred chhHHHHHHHH-hhcC-CEEEEecCCCCchhhhhhc--CeeEEe
Q 012767 253 PEHKYEIVKHL-QARN-HICGMIGNGVNDAPALKKA--DIGIAV 292 (456)
Q Consensus 253 P~~K~~iV~~l-q~~g-~~v~~iGDG~ND~~aLk~A--dvGIa~ 292 (456)
| |.+++... .+.| ..++||||..+|+.+-++| |+-...
T Consensus 131 ~--kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~ 172 (197)
T PHA02597 131 S--KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIH 172 (197)
T ss_pred c--cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEE
Confidence 2 23333322 2222 4688999999999999999 886443
|
2 hypothetical protein; Provisional |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=90.23 E-value=4.2 Score=43.44 Aligned_cols=98 Identities=15% Similarity=0.083 Sum_probs=62.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-hCCCC----CCC--CCccccCCchhhhhhcCChHHHHhhcccc
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGT----NMY--PSSALSGQDRDESIVALPVDELIEKADGF 248 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~-lGi~~----~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ 248 (456)
+++++.+. +++.|. ++++|+-....+..++++ +|++. +.. ....++|.-.. -
T Consensus 111 l~~~a~~~---~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g-----------------~ 169 (497)
T PLN02177 111 VHPETWRV---FNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKK-----------------P 169 (497)
T ss_pred cCHHHHHH---HHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecC-----------------C
Confidence 56665554 455775 499999999999999987 88862 100 01111211000 0
Q ss_pred cccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEecc
Q 012767 249 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD 294 (456)
Q Consensus 249 a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~ 294 (456)
..+.-++|..-++..........+.||+.||.|||+.|+-+.++..
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 0134467877776433211223789999999999999999999975
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.19 E-value=0.81 Score=43.38 Aligned_cols=101 Identities=15% Similarity=0.152 Sum_probs=72.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccC
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 252 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~ 252 (456)
.-++.|++.++++.|+..|+.+.+.|+-....+..+...+|+.... ..++.+.+.. -..-.
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~-----------------~~KP~ 144 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVA-----------------RGKPA 144 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHh-----------------cCCCC
Confidence 3468899999999999999999999999999999999999986321 1122211110 11222
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
|+-=....+.|.-....|+.+.|..|.+.|-++|+.-+-.
T Consensus 145 Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 145 PDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred CHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEE
Confidence 3333455566555567899999999999999999976544
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=89.87 E-value=0.71 Score=44.15 Aligned_cols=89 Identities=22% Similarity=0.205 Sum_probs=55.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHH---HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLA---IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 251 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~---~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~ 251 (456)
++=|++.+.++.+++.|++|+.+||+... .+..--++.|+... +..++.+.... -...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~-----------------~~~~ 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDP-----------------SKKS 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESST-----------------SS--
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhcccccccc-----------------cccc
Confidence 45578999999999999999999998864 22333456675421 11111111100 0001
Q ss_pred CchhHHHHHHHHhhcCC-EEEEecCCCCchhh
Q 012767 252 FPEHKYEIVKHLQARNH-ICGMIGNGVNDAPA 282 (456)
Q Consensus 252 ~P~~K~~iV~~lq~~g~-~v~~iGDG~ND~~a 282 (456)
..+-|...-+.++++|+ +++++||..+|...
T Consensus 176 ~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 176 AVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 12347778888888854 57789999999875
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=89.33 E-value=0.4 Score=46.29 Aligned_cols=48 Identities=27% Similarity=0.385 Sum_probs=39.2
Q ss_pred ccCc--hhHHHHHHHHhhcCCEEEEecC----CCCchhhhhh-cCeeEEeccccHH
Q 012767 250 GVFP--EHKYEIVKHLQARNHICGMIGN----GVNDAPALKK-ADIGIAVADATDA 298 (456)
Q Consensus 250 ~~~P--~~K~~iV~~lq~~g~~v~~iGD----G~ND~~aLk~-AdvGIa~~~~~~~ 298 (456)
++.| -+|+..++.|+ ....|+++|| |.||.+||+. -=.||+|.+-.|.
T Consensus 182 Di~~~gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~ 236 (245)
T PLN02423 182 DVFPQGWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDT 236 (245)
T ss_pred EEeeCCCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHH
Confidence 4444 47999999999 7788999999 8999999996 7789998754443
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.33 E-value=1.1 Score=42.77 Aligned_cols=91 Identities=11% Similarity=0.089 Sum_probs=54.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++-|++.++++.|++. +++.++|..+... ...|+..-. ..++..++ +....|.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~f--d~i~~~~~-------------------~~~~KP~ 165 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDYF--EFVLRAGP-------------------HGRSKPF 165 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHhh--ceeEeccc-------------------CCcCCCc
Confidence 4668999999999875 8999999866541 455653210 01111000 0111222
Q ss_pred hH--HHHHHHHhhcCCEEEEecCC-CCchhhhhhcCeeEEe
Q 012767 255 HK--YEIVKHLQARNHICGMIGNG-VNDAPALKKADIGIAV 292 (456)
Q Consensus 255 ~K--~~iV~~lq~~g~~v~~iGDG-~ND~~aLk~AdvGIa~ 292 (456)
-. ..+++.+.-....++||||. ..|+.+-+.||+-...
T Consensus 166 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 166 SDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 11 22233444345679999999 5999999999976543
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.12 E-value=1.5 Score=40.93 Aligned_cols=121 Identities=13% Similarity=0.190 Sum_probs=71.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++-+++.++++.++.. +++.++|.-.........+++|+... ++..+..+ -+....|.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd~v~~s~--------------------~~g~~KP~ 156 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FDAVFISE--------------------DVGVAKPD 156 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hheEEEec--------------------ccccCCCC
Confidence 4567899999999888 99999999888888888899996531 11111111 01122232
Q ss_pred hH--HHHHHHHhhcCCEEEEecCCC-CchhhhhhcCee-EEecccc---HHHhhcccEEeeCCCchHHHHHH
Q 012767 255 HK--YEIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAVADAT---DAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K--~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvG-Ia~~~~~---~~a~~aaDivl~~~~l~~i~~~i 319 (456)
.+ ....+.+.-....++||||.. ||+..-+++|.- |-+.... .......+..+ .++..+..++
T Consensus 157 ~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i--~~l~~l~~~~ 226 (229)
T COG1011 157 PEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEI--SSLAELLDLL 226 (229)
T ss_pred cHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEE--cCHHHHHHHH
Confidence 22 233444444456799999975 886666666664 3333211 11114555555 3355555444
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=85.45 E-value=1.3 Score=39.83 Aligned_cols=85 Identities=15% Similarity=0.078 Sum_probs=51.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++ ++.++|.-+........+.+|+.... ..++.+++. ....-.|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-----------------~~~KP~p~ 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDTV-----------------RAYKPDPV 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhhc-----------------CCCCCCHH
Confidence 47889999998 36789998888888888888874211 011111100 01111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhh
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKK 285 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~ 285 (456)
-=..+.+.+.-....++||||+..|+.+-++
T Consensus 144 ~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 144 VYELVFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 1134445555455679999999999877654
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=84.81 E-value=5 Score=35.99 Aligned_cols=102 Identities=21% Similarity=0.178 Sum_probs=65.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHH---HHHh-----CCCCCCCCCccccCCc-hhhhhhcCChHHHHhh
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKET---GRRL-----GMGTNMYPSSALSGQD-RDESIVALPVDELIEK 244 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~i---a~~l-----Gi~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~ 244 (456)
|..++++.+..+.+++.|++++-+|+...-.+..+ -... +++. ..++...+ .-... .
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~----Gpv~~sP~~l~~al----------~ 91 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD----GPVLLSPDSLFSAL----------H 91 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC----CCEEECCcchhhhh----------h
Confidence 68999999999999999999999999996544333 2222 3321 11111100 00000 0
Q ss_pred cccccccCchhHHHHHHHHhhc-----CCEEEEecCCCCchhhhhhcCee
Q 012767 245 ADGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGVNDAPALKKADIG 289 (456)
Q Consensus 245 ~~v~a~~~P~~K~~iV~~lq~~-----g~~v~~iGDG~ND~~aLk~AdvG 289 (456)
-++..+-..+.|...++.++.. ...++..|...+|+.+.++++|.
T Consensus 92 rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 0123333346788888888764 34577889999999999998875
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=84.69 E-value=1.2 Score=40.19 Aligned_cols=92 Identities=15% Similarity=0.013 Sum_probs=60.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
..||++.+.++.|.+. +++++.|......|..+...++.....+. ..+.. .-...
T Consensus 42 ~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~-~~l~r-----------------------~~~~~ 96 (162)
T TIGR02251 42 FKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVIS-RRLYR-----------------------ESCVF 96 (162)
T ss_pred EECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEe-EEEEc-----------------------cccEE
Confidence 4799999999999887 99999999999999999999886431111 01110 00000
Q ss_pred hHHHHHHHHh---hcCCEEEEecCCCCchhhhhhcCeeEE
Q 012767 255 HKYEIVKHLQ---ARNHICGMIGNGVNDAPALKKADIGIA 291 (456)
Q Consensus 255 ~K~~iV~~lq---~~g~~v~~iGDG~ND~~aLk~AdvGIa 291 (456)
.|..+++.|. .....|+||||...|..+-+.++|-|.
T Consensus 97 ~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 97 TNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred eCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 0111333333 334579999999988877666655543
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=84.27 E-value=4.1 Score=39.89 Aligned_cols=48 Identities=21% Similarity=0.265 Sum_probs=34.7
Q ss_pred EecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHH---HHHHhCCC
Q 012767 168 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKE---TGRRLGMG 215 (456)
Q Consensus 168 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~---ia~~lGi~ 215 (456)
|++.-.+.+-|++.++|++|++.|++++++|+....+... --+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 3344456677889999999999999999999976443333 23556764
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=84.00 E-value=5.8 Score=38.83 Aligned_cols=43 Identities=16% Similarity=0.329 Sum_probs=32.7
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHhCCC
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 215 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia---~~lGi~ 215 (456)
..|+=|++.+..+.+++.|++|+++||.....-..+. ++.|+.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~ 188 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYH 188 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCC
Confidence 4566789999999999999999999999864333333 345664
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=83.53 E-value=2 Score=41.69 Aligned_cols=118 Identities=14% Similarity=0.111 Sum_probs=64.7
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhc-----ccccccC
Q 012767 178 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA-----DGFAGVF 252 (456)
Q Consensus 178 ~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-----~v~a~~~ 252 (456)
++..++++.|++.++++.+.|+.........+...|+.. +.+.+... ..+..-.
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~---------------------~~~~i~~~~~~~~~~~gKP~ 181 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP---------------------FVTALEYATDTKATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH---------------------HHHHHHHHhCCCceeecCCC
Confidence 678889999999999999999876543332222222210 00000000 0111112
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCC-CchhhhhhcCeeEE-ecccc---H---HHhhcccEEeeCCCchHHHHH
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIA-VADAT---D---AARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvGIa-~~~~~---~---~a~~aaDivl~~~~l~~i~~~ 318 (456)
|+-=..+++.+......++||||.. +|+.+-+.+++--. +..|. . .....+|+++ +++..+..+
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 2211233444444457799999996 99999998887543 33331 1 1123467777 446666544
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=83.24 E-value=24 Score=38.11 Aligned_cols=164 Identities=15% Similarity=0.109 Sum_probs=94.0
Q ss_pred chhhhHHHHHHHHHHHccC-eeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCc-chHHHHHHHHhCCCeEEEEcCCc
Q 012767 124 SKIGRKVNAVINKFAERGL-RSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIH-DSAETIRRALSLGLGVKMITGDQ 201 (456)
Q Consensus 124 ~~~~~~~~~~i~~~~~~Gl-r~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~-~~~~~I~~l~~~Gi~v~miTGD~ 201 (456)
....+...+.++.+.++|. ++..+.-+. ....+.-..-+|+-.+.....| +-.+.+++++..| +.++..||.
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~-----~~~a~~i~~~lgi~~~f~~~~p~~K~~~i~~l~~~~-~~v~~vGDg 434 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDR-----RAVAERVARELGIDEVHAELLPEDKLEIVKELREKY-GPVAMVGDG 434 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCC-----HHHHHHHHHHcCChhhhhccCcHHHHHHHHHHHhcC-CEEEEEeCC
Confidence 3566778888999999999 766654321 0000000011222222222222 3466888888777 455567886
Q ss_pred HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEec-CCCCch
Q 012767 202 LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIG-NGVNDA 280 (456)
Q Consensus 202 ~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iG-DG~ND~ 280 (456)
..-+... +..+ .-+..| +| ..
T Consensus 435 ~nD~~al-------------------------------------------------------~~A~-vgia~g~~~--~~ 456 (536)
T TIGR01512 435 INDAPAL-------------------------------------------------------AAAD-VGIAMGASG--SD 456 (536)
T ss_pred HHHHHHH-------------------------------------------------------HhCC-EEEEeCCCc--cH
Confidence 6433222 2222 233445 33 33
Q ss_pred hhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhHH
Q 012767 281 PALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN--FLFTLD 358 (456)
Q Consensus 281 ~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~--~~~pl~ 358 (456)
.+...||+=+.-.+-.+. . ..+...-+.-|.+.+|+.+.+.|++..+.+++++.+.|++ ..+..+
T Consensus 457 ~~~~~ad~vl~~~~l~~l----~---------~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~~~p~~aa~~m~~s 523 (536)
T TIGR01512 457 VAIETADVVLLNDDLSRL----P---------QAIRLARRTRRIVKQNVVIALGIILLLILLALFGVLPLWLAVLGHEGS 523 (536)
T ss_pred HHHHhCCEEEECCCHHHH----H---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHcCh
Confidence 445577765532211111 1 1133444556789999999999999999999999999977 456666
Q ss_pred HHHHHH
Q 012767 359 TVIAIL 364 (456)
Q Consensus 359 ~~~~l~ 364 (456)
++.+++
T Consensus 524 s~~v~~ 529 (536)
T TIGR01512 524 TVLVIL 529 (536)
T ss_pred HHHHHH
Confidence 666653
|
. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=82.33 E-value=2.5 Score=41.88 Aligned_cols=41 Identities=7% Similarity=-0.016 Sum_probs=37.9
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 012767 176 PI-HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 216 (456)
Q Consensus 176 ~r-~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~ 216 (456)
+| |++.++++.|++.|+++.++|+-....+...-+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999999999999974
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=81.26 E-value=1.7 Score=42.06 Aligned_cols=45 Identities=20% Similarity=0.316 Sum_probs=38.9
Q ss_pred EecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh
Q 012767 168 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 212 (456)
Q Consensus 168 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~l 212 (456)
|++.-.+.+-|++.++|+.|++.|++++++|+....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 555556778899999999999999999999999998887777765
|
|
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=80.96 E-value=6 Score=40.18 Aligned_cols=37 Identities=11% Similarity=0.084 Sum_probs=34.3
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh-C
Q 012767 177 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL-G 213 (456)
Q Consensus 177 r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~l-G 213 (456)
-|++.++++.|++.|+++.++|+-....+..+.+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 479999999999999999999999999999988886 6
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=80.93 E-value=2.9 Score=40.29 Aligned_cols=48 Identities=8% Similarity=0.016 Sum_probs=37.9
Q ss_pred EecccCCCCCcchHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHhCCC
Q 012767 168 GLIPLFDPPIHDSAETIRRALSLGLGVKMITG---DQLAIAKETGRRLGMG 215 (456)
Q Consensus 168 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTG---D~~~~a~~ia~~lGi~ 215 (456)
|++.-.+.+-|++.++|++|++.|++++++|| ..........+.+|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 34444566667999999999999999999996 5677777777778874
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=80.47 E-value=16 Score=35.19 Aligned_cols=132 Identities=15% Similarity=0.114 Sum_probs=67.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCc--hh--hhhhcCChHHHHhhccccc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD--RD--ESIVALPVDELIEKADGFA 249 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~--~~--~~~~~~~~~~~~~~~~v~a 249 (456)
-.+|+++.+.++.|.+.+|++.|.|+.-.....++-++-|..... ..+..+- .+ ..+.+... +++ +
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~N---v~VvSN~M~Fd~~g~l~gF~~-~lI---H--- 158 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPN---VKVVSNFMDFDEDGVLVGFKG-PLI---H--- 158 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTT---EEEEEE-EEE-TTSBEEEE-S-S---------
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCC---eEEEeeeEEECCcceEeecCC-Cce---E---
Confidence 347999999999999999999999998888888888877643211 1111000 00 00000000 000 0
Q ss_pred ccCchhHHH-------HHHHHhhcCCEEEEecCCCCchhhhhhc---CeeEEec--cc-----cHHHhhcccEEeeCCCc
Q 012767 250 GVFPEHKYE-------IVKHLQARNHICGMIGNGVNDAPALKKA---DIGIAVA--DA-----TDAARSAADIVLTEPGL 312 (456)
Q Consensus 250 ~~~P~~K~~-------iV~~lq~~g~~v~~iGDG~ND~~aLk~A---dvGIa~~--~~-----~~~a~~aaDivl~~~~l 312 (456)
+-.|-+ .-+.++. ...|+-.||...|+.|-.-. +.-+.+| +. -+.-.++=|||+.++.=
T Consensus 159 ---~~NKn~~~l~~~~~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~t 234 (246)
T PF05822_consen 159 ---TFNKNESALEDSPYFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQT 234 (246)
T ss_dssp ---TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B
T ss_pred ---EeeCCcccccCchHHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCC
Confidence 011111 1122322 45799999999999997655 4444455 32 22346788999997764
Q ss_pred hHHHHHH
Q 012767 313 NVIITAV 319 (456)
Q Consensus 313 ~~i~~~i 319 (456)
-.++..|
T Consensus 235 m~v~~~i 241 (246)
T PF05822_consen 235 MDVPNAI 241 (246)
T ss_dssp -HHHHHH
T ss_pred chHHHHH
Confidence 4444433
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=80.08 E-value=4.7 Score=43.37 Aligned_cols=40 Identities=15% Similarity=0.172 Sum_probs=32.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH------------HHHHHHHHHhCCC
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQL------------AIAKETGRRLGMG 215 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~------------~~a~~ia~~lGi~ 215 (456)
+-|++.+.++.|++.|++++|+|.-.. ..+..+.+.+|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 468999999999999999999997444 3456677777774
|
Note that the EC number for the kinase function is: 2.7.1.78 |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 456 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 1e-136 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 2e-54 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 4e-19 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 4e-19 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 4e-19 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 6e-19 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 3e-12 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 2e-11 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 1e-10 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 6e-09 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 1e-06 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 1e-06 | ||
| 2o98_P | 52 | Structure Of The 14-3-3 H+-Atpase Plant Complex Len | 8e-06 | ||
| 3m50_P | 31 | Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY E | 2e-05 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 3e-04 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 3e-04 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2O98|P Chain P, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 52 | Back alignment and structure |
|
| >pdb|3M50|P Chain P, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY EPIBESTAT Length = 31 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 456 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-163 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 4e-04 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-148 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 3e-50 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 9e-50 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 3e-44 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 1e-29 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 2e-29 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-27 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 3e-27 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-26 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 4e-26 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 3e-22 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-12 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 1e-11 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 3e-07 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 8e-07 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 1e-06 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 1e-06 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 1e-06 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 3e-06 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 3e-06 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 3e-06 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 4e-06 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 4e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 4e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 2e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-04 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 2e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 3e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 482 bits (1243), Expect = e-163
Identities = 250/332 (75%), Positives = 288/332 (86%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
M+AI +MAGMDVLC DKTGTLTLNKL+VDKNL+E+F GV+ D V+L AA AS+VEN D
Sbjct: 314 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDA 373
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLL 120
IDAA+VGMLADPKEARA I+EVHFLPF+P KRTALTYID G HRV+KG+PEQIL L
Sbjct: 374 IDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELA 433
Query: 121 HNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS 180
+ + +KV ++I+K+AERGLRSLAVA Q VPE +KES G+PW+F+GL+PLFDPP HDS
Sbjct: 434 KASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDS 493
Query: 181 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240
AETIRRAL+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL G +D ++ ++PV+E
Sbjct: 494 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEE 553
Query: 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300
LIEKADGFAGVFPEHKYEIVK LQ R HI GM G+GVNDAPALKKADIGIAVADATDAAR
Sbjct: 554 LIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAAR 613
Query: 301 SAADIVLTEPGLNVIITAVLISRAIFQRMRNY 332
A+DIVLTEPGL+VII+AVL SRAIFQRM+NY
Sbjct: 614 GASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 645
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 365 QTAFTSKKDFGKEERELLWAHAQRTLH 391
+TAFT KKD+GKEERE W H
Sbjct: 857 KTAFTMKKDYGKEEREAQWMRGSHHHH 883
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 444 bits (1145), Expect = e-148
Identities = 138/343 (40%), Positives = 198/343 (57%), Gaps = 21/343 (6%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVEN--L 58
+SAI +AG+++LC DKTGTLT NKL++ GVD + ++L A A+ + +
Sbjct: 363 LSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPEDLMLTACLAASRKKKGI 419
Query: 59 DVIDAAIVGMLADPKEARADIQE---VHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQ 115
D ID A + L A++ + + + F PFDP K+ +G+ KG+P
Sbjct: 420 DAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLF 479
Query: 116 ILNLLHNKSKIG----RKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIP 171
+L + I + + +FA RG RSL VA + W+ +G++P
Sbjct: 480 VLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG--------EGSWEILGIMP 531
Query: 172 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDE 231
DPP HD+ +T+ A +LGL +KM+TGD + IA+ET R+LG+GTN+Y + L +
Sbjct: 532 CMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGD 591
Query: 232 SIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 291
+ V + +E ADGFA VFP+HKY +V+ LQ R ++ M G+GVNDAP+LKKAD GIA
Sbjct: 592 -MPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIA 650
Query: 292 VADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMV 334
V ++DAARSAADIV PGL II A+ SR IF RM Y+V
Sbjct: 651 VEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVV 693
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 182 bits (465), Expect = 3e-50
Identities = 95/399 (23%), Positives = 145/399 (36%), Gaps = 83/399 (20%)
Query: 12 VLCCDKTGTLTLNKLTV-----DKNLIEIFAGGVDA----------------------DT 44
V+C DKTGTLT N++TV D ++ +
Sbjct: 382 VICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRA 441
Query: 45 VVLMAARASQVENLDVI----DAAIVGM----LADPKEARADIQEVHFLPFDPTGKR--T 94
A V VI + A++ L + R +V +PF+ T K +
Sbjct: 442 AFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLS 501
Query: 95 ALTYIDSEGKMHRV-TKGSPEQILN-----LLHNKSK-----IGRKVNAVINKFAERGLR 143
T D H + KG+PE++L L+ + G R
Sbjct: 502 IHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGER 561
Query: 144 SLAVAYQEVPEGSKESSGSPWQ-----------FIGLIPLFDPPIHDSAETIRRALSLGL 192
L + E + F GL+ + DPP + + + + G+
Sbjct: 562 VLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGI 621
Query: 193 GVKMITGDQ----LAIAKETG-------RRLGMGTNMYPSSALSGQDRDESIV------- 234
V M+TGD AIA G + + + + V
Sbjct: 622 RVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK 681
Query: 235 ALPVDELIEKADG-----FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 289
+ EL+E FA P+ K IV+ Q I + G+GVND+PALKKADIG
Sbjct: 682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIG 741
Query: 290 IAVADA-TDAARSAADIVLTEPGLNVIITAVLISRAIFQ 327
+A+ A +DAA++AAD++L + I+T V R IF
Sbjct: 742 VAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFD 780
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 9e-50
Identities = 90/403 (22%), Positives = 147/403 (36%), Gaps = 91/403 (22%)
Query: 12 VLCCDKTGTLTLNKLTVDKNLIEIFAGG--VDADTVVLMAARASQVENLDVIDAAIVGML 69
+C DKTGTLT N++TV ++ +ADT + A + + + L
Sbjct: 377 TICSDKTGTLTQNRMTVAH----MWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAAL 432
Query: 70 A-------------------------------------DPKEARADIQEVHFLPFDPTGK 92
+ R ++ +PF+ T K
Sbjct: 433 CNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNK 492
Query: 93 R--TALTYIDSEGKMHRV-TKGSPEQILN-----LLHNKSK-----IGRKVNAVINKFAE 139
+ S + + KG+PE+IL+ LL+ + + +
Sbjct: 493 YQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGG 552
Query: 140 RGLRSLAVAYQEVPEGSKESSGSPWQ-----------FIGLIPLFDPPIHDSAETIRRAL 188
G R L + +PE F+GL+ + DPP + + +
Sbjct: 553 LGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCR 612
Query: 189 SLGLGVKMITGDQ----LAIAKETG-------RRLGMGTNMYPSSALSGQDRDESIV--- 234
S G+ V M+TGD AIAK G + + ++ V
Sbjct: 613 SAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHG 672
Query: 235 ----ALPVDELIEKADG-----FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKK 285
L + L + FA P+ K IV+ Q + I + G+GVND+PALKK
Sbjct: 673 SDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKK 732
Query: 286 ADIGIAVADA-TDAARSAADIVLTEPGLNVIITAVLISRAIFQ 327
ADIG+A+ + +D ++ AAD++L + I+T V R IF
Sbjct: 733 ADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFD 775
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 3e-44
Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 36/279 (12%)
Query: 85 LPFDPTGKRTALTYIDSEGKMHRV-----TKGSPEQILNLLHNKSKIG----------RK 129
L F K ++ ++ V KG+PE +++ + K
Sbjct: 486 LEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEK 545
Query: 130 VNAVINKF--AERGLRSLAVAYQEVPEGSKESSGSPWQ----------FIGLIPLFDPPI 177
+ +VI ++ LR LA+A ++ P +E F+G++ + DPP
Sbjct: 546 ILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPR 605
Query: 178 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSS--ALSGQDRDESIVA 235
+ +I+ G+ V MITGD A RR+G+ + A +G++ D
Sbjct: 606 KEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFD----D 661
Query: 236 LPVDELIEKADG---FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 292
LP+ E E FA V P HK +IV++LQ+ + I M G+GVNDAPALKKA+IGIA+
Sbjct: 662 LPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM 721
Query: 293 ADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRN 331
T A++A+++VL + + I+ AV RAI+ M+
Sbjct: 722 GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQ 760
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 1e-29
Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 30/166 (18%)
Query: 165 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 224
+ I + D P + + + + + GL + +++GD+ KE + L
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN----------- 174
Query: 225 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 284
+ E + + PE K I++ L+ + MIG+GVNDA AL
Sbjct: 175 -------------IQEYY------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215
Query: 285 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMR 330
AD+ +A+ + D +++ ADI+L + ++ + + + +
Sbjct: 216 LADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 2e-29
Identities = 82/328 (25%), Positives = 127/328 (38%), Gaps = 73/328 (22%)
Query: 7 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAA---RASQVENLDVIDA 63
+ + DKTGTLT + V +I D ++ +AA S+ I A
Sbjct: 10 AKDLQAVIFDKTGTLTEGRFGV----TDIVGFNHSEDELLQIAASLEARSE----HPIAA 61
Query: 64 AIVGMLADPKEARADIQEVHFLPFD-PTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN 122
AIV + ++ + EV F GK G R SP +
Sbjct: 62 AIV---EEAEKRGFGLTEVE--EFRAIPGKGVEGIV---NG--RRYMVVSP----GYI-- 105
Query: 123 KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAE 182
++G K + + K ++G + + + G+I L D +S E
Sbjct: 106 -RELGIKTDESVEKLKQQGKTVVFILKNG-------------EVSGVIALADRIRPESRE 151
Query: 183 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELI 242
I + ++G+ M+TGD +AK LG +D+
Sbjct: 152 AISKLKAIGIKCMMLTGDNRFVAKWVAEELG------------------------LDDYF 187
Query: 243 EKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSA 302
A V P K E VK +Q + ++ M+G+GVNDAPAL +AD+GIA+ TD A
Sbjct: 188 ------AEVLPHEKAEKVKEVQQK-YVTAMVGDGVNDAPALAQADVGIAIGAGTDVAVET 240
Query: 303 ADIVLTEPGLNVIITAVLISRAIFQRMR 330
ADIVL + V +SR + +
Sbjct: 241 ADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 2e-27
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 165 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 224
+ G+I + D + ++ +G+ V MITGD A+ R L
Sbjct: 153 RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN----------- 201
Query: 225 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 284
+D +I A V P K E VK LQA+ + +G+G+NDAPAL
Sbjct: 202 -------------LDLVI------AEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 241
Query: 285 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMR 330
+AD+GIAV +D A + DIVL L ++ A+ +SR +++
Sbjct: 242 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 3e-27
Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 33/167 (19%)
Query: 165 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 224
+ + L+ + DP + ETI G+ + M+TGD A+ LG
Sbjct: 544 KTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG----------- 592
Query: 225 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 284
+ +++ A + PE K IV L+ + I M G+GVNDAPAL
Sbjct: 593 -------------IKKVV------AEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALA 633
Query: 285 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRN 331
KADIGIA+ TD A +A + L L I A +S + M N
Sbjct: 634 KADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSEST---MSN 677
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 1e-26
Identities = 75/330 (22%), Positives = 121/330 (36%), Gaps = 78/330 (23%)
Query: 7 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV--IDAA 64
+ + DKTGTLT K V ++ D ++ +AA E I A
Sbjct: 401 AEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAA---IAERRSEHPIAEA 453
Query: 65 IVGMLADPKEARADIQEVHFLPFD-PTGKRTALTYIDSEG-KMHRVTKGSPEQILNLLHN 122
IV + + ++ + G+ G + G+ L+ +
Sbjct: 454 IVKKALEHGIELGEPEK-----VEVIAGE----------GVVADGILVGNK----RLMED 494
Query: 123 KS-KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSA 181
+ +V + K ++ VA + G+I + D +
Sbjct: 495 FGVAVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAK 541
Query: 182 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 241
++ +G+ V MITGD A+ R L +D +
Sbjct: 542 PAVQELKRMGIKVGMITGDNWRSAEAISRELN------------------------LDLV 577
Query: 242 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARS 301
I A V P K E VK LQA+ + +G+G+NDAPAL +AD+GIAV +D A
Sbjct: 578 I------AEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVE 630
Query: 302 AADIVLTEPGLNVIITAVLISRAIFQRMRN 331
+ DIVL L ++ A+ +SR M
Sbjct: 631 SGDIVLIRDDLRDVVAAIQLSRKT---MSK 657
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 4e-26
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 165 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 224
+ G+I + D + ++ +G+ V MITGD A+ R L
Sbjct: 447 RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN----------- 495
Query: 225 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 284
+D +I A V P K E VK LQA+ + +G+G+NDAPAL
Sbjct: 496 -------------LDLVI------AEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 535
Query: 285 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMR 330
+AD+GIAV +D A + DIVL L ++ A+ +SR +++
Sbjct: 536 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 581
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} Length = 52 | Back alignment and structure |
|---|
Score = 88.6 bits (219), Expect = 3e-22
Identities = 36/52 (69%), Positives = 47/52 (90%)
Query: 405 SSYGELSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 456
+++ EL+ +AEEA+RRAEIAR RELHTLKGHVES+++LKGLDI+ IQQSY +
Sbjct: 1 TNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 1e-12
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 39 GVDADTVVLMAARAS--QVENLDVIDAAIV--GMLADPKEARADIQEVHFLPFDPTGKRT 94
G ++ V+ A S Q +++D A++ + + Q++ +PFD +R
Sbjct: 12 GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRM 71
Query: 95 ALTYIDSEGKMHRVTKGSPEQILNL---LHNKSKIG-------RKVNAVINKFAERGLRS 144
++ ++ V KG+ ++ILN+ + + +I RK+ V + +GLR
Sbjct: 72 SVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRV 131
Query: 145 LAVAYQEVPEGSKESSGSPWQ---FIGLIPLFDPP 176
+AVA + +P + + G I D
Sbjct: 132 VAVATKYLPAREGDYQRADESDLILEGYIAFLDHH 166
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* Length = 31 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 1e-11
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 427 RELHTLKGHVESLIRLKGLDIDAIQQSYSV 456
RELHTLKGHVE++++LKGLDI+ IQQSY +
Sbjct: 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 49.0 bits (118), Expect = 3e-07
Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 254 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 309
K V + + +GN V+D LK+ + ADA A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 310 PG 311
G
Sbjct: 142 SG 143
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 8e-07
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 254 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 309
+ K +K I +GN VND P +AVA A D R AA V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 310 PG 311
PG
Sbjct: 145 PG 146
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 1e-06
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 254 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 309
K + L I IG+ +NDA LK+ I A A R + I L +
Sbjct: 78 VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEK 137
Query: 310 PG 311
G
Sbjct: 138 RG 139
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 1e-06
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 254 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 309
+K L + I +G+ + D P ++K + +AVADA AD V
Sbjct: 100 SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRI 159
Query: 310 PG 311
G
Sbjct: 160 AG 161
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 1e-06
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 254 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 309
K EI + ++ + + G IG+ V D +KK +AV +A + R A +
Sbjct: 83 YKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQR 142
Query: 310 PG 311
G
Sbjct: 143 NG 144
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 3e-06
Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 254 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 309
K +HL+ + IG+ + D P +++ +G+AV++A AD
Sbjct: 93 VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTER 152
Query: 310 PG 311
G
Sbjct: 153 TG 154
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 3e-06
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 254 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 309
K L + + IG+ D PA AVADA ++A D VL+
Sbjct: 82 LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLST 141
Query: 310 PG 311
G
Sbjct: 142 HG 143
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 3e-06
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 254 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 309
E K ++ L A + +G+ + D P +++ +G+AVA+A R A +
Sbjct: 93 EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRA 152
Query: 310 PG 311
G
Sbjct: 153 QG 154
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 4e-06
Identities = 15/62 (24%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 254 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 309
K L A IG+ + D P + + + +AVADA A V
Sbjct: 123 SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRI 182
Query: 310 PG 311
G
Sbjct: 183 KG 184
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 4e-06
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 254 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 309
+ K + + + I G IG+ + D P ++K + + VAD A+ V
Sbjct: 99 DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHI 158
Query: 310 PG 311
G
Sbjct: 159 KG 160
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 3e-05
Identities = 46/309 (14%), Positives = 83/309 (26%), Gaps = 97/309 (31%)
Query: 219 YP--SSALSGQDRDESIVALPVDELIEKADGFAG---VFPEHKYEIV---KHLQARNH-- 268
Y S + + R S + IE+ D VF KY + +L+ R
Sbjct: 91 YKFLMSPIKTEQRQPS---MMTRMYIEQRDRLYNDNQVFA--KYNVSRLQPYLKLRQALL 145
Query: 269 ---------ICGMIGNG--------VNDAPALKKADIGI---AVADATDAARSAADIVLT 308
I G++G+G K D I + + S ++
Sbjct: 146 ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN----CNSPETVLEM 201
Query: 309 EPGLNVIITAVLISRA------------IFQRMRNYMVRG--------IDGLSSTEFIQV 348
L I SR+ I +R + + + + +
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261
Query: 349 LELN--FLFTLDTVIAILQTAFTSKKDF--GKEERELLWAHAQRTLHGLQPPDT-SMFS- 402
L+ L T T F DF + H L P + S+
Sbjct: 262 FNLSCKILLT---------TRFKQVTDFLSAATTTHISLDHHSM---TLTPDEVKSLLLK 309
Query: 403 -VRSSYGELSWMAEEARRR-----AEI-ARLRE--------LHTLKGHVESLIR--LKGL 445
+ +L E + I +R+ H + ++I L L
Sbjct: 310 YLDCRPQDLP---REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366
Query: 446 DIDAIQQSY 454
+ ++ +
Sbjct: 367 EPAEYRKMF 375
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 4e-05
Identities = 24/132 (18%), Positives = 38/132 (28%), Gaps = 7/132 (5%)
Query: 161 GSPWQFIGLIPLFDPPIHDSA-ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY 219
S + I L D I + E + + +I+G + +Y
Sbjct: 62 SSLKEEITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIY 121
Query: 220 PSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVND 279
+ A D G K ++ L N MIG+ V D
Sbjct: 122 CNHASFDNDYIHIDWPHSCKGTCSNQCGCC------KPSVIHELSEPNQYIIMIGDSVTD 175
Query: 280 APALKKADIGIA 291
A K +D+ A
Sbjct: 176 VEAAKLSDLCFA 187
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 251 VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 306
+F K E++ LQ +I ++G+G ND K A I IA +A + + A
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 307 LTEPGLNVII 316
+ EP L +I
Sbjct: 197 INEPDLALIK 206
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 251 VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 306
V + K +I+ L + + +G+G ND + A +G+A A + A
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 307 LTEPGLNVII 316
+ GL ++
Sbjct: 300 VRFAGLGGVV 309
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 2e-04
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 251 VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 306
+ K EI++ + I +G+G ND KKA + IA A + ADI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 307 LTEPGLNVII 316
+ + L I+
Sbjct: 198 IEKRDLREIL 207
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 2e-04
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 273 IGNGVNDAPALKKADIGIAVADATDAARSAADIV 306
IG+ ND P + A+ATD ++ +D V
Sbjct: 175 IGDSNNDMPMFQLPVRKACPANATDNIKAVSDFV 208
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 251 VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 306
+ +K + + L AR +I G+G ND P L+ A GIA A R
Sbjct: 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQ 300
Query: 307 LTEPGLNVII 316
+ G +++
Sbjct: 301 INYHGFELLL 310
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 456 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 100.0 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.96 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.96 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.82 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.77 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.52 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 99.44 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.42 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.41 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.39 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.39 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.34 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.29 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.28 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 99.27 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.27 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 99.24 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.16 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.14 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.14 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.08 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.01 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.01 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.0 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.99 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.99 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.97 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.97 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 98.94 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.94 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.93 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.92 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.85 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.84 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.84 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.84 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.79 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.79 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.77 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.74 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.72 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.62 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.61 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.61 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.59 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.59 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.57 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.57 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.55 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.53 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.5 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.48 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.47 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.46 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.45 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.44 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.42 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.42 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 98.42 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.4 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.4 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.39 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.39 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.39 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.38 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.37 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.36 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.36 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.36 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.34 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.34 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.34 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.31 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.28 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.27 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.26 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.25 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.24 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.24 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.23 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.22 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.2 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.19 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.16 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.15 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.15 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.14 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.14 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.14 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.14 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.13 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.13 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.12 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.11 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.1 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.06 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.04 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 98.04 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.03 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.03 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.99 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.97 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.92 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.87 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.8 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.73 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.69 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.68 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.66 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.56 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.52 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.51 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.47 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.44 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.39 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.38 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.36 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.34 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.3 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.28 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 97.24 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 97.21 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 97.01 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.95 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.94 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.91 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.81 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.8 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.76 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.49 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.46 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.36 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 96.13 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.07 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 95.87 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.69 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 95.48 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 95.17 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 94.8 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 94.52 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 94.35 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 94.26 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 93.31 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 92.28 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 91.91 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 91.71 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 91.4 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 91.05 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 90.37 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 89.91 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 89.49 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 85.24 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 84.41 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 84.26 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 80.84 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-67 Score=585.90 Aligned_cols=363 Identities=70% Similarity=1.068 Sum_probs=318.8
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcce
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ 80 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~ 80 (456)
++++|+||++|+||||||||||+|+|+|.+.+++.+..++++++++.+++.++...+.||++.|++.++.++...+.+++
T Consensus 314 ~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~ 393 (885)
T 3b8c_A 314 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIR 393 (885)
T ss_dssp GGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSC
T ss_pred chHHHHHhCCCEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCc
Confidence 47899999999999999999999999998654444555678889999999998765678999999999877655567788
Q ss_pred EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCC
Q 012767 81 EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESS 160 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~ 160 (456)
.++.+||++.+|+|++++++.+|+.+.++||+|+.++++|..+.+.++.+.+.+++|+++|+|++++|++.+++...+..
T Consensus 394 ~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~ 473 (885)
T 3b8c_A 394 EVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESP 473 (885)
T ss_dssp CBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCC
T ss_pred eeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEecccccccccc
Confidence 89999999999999988877678878899999999999998666677788889999999999999999999887777778
Q ss_pred CCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHH
Q 012767 161 GSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240 (456)
Q Consensus 161 e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 240 (456)
|++++|+|+++++|||||+++++|+.|+++||+|+|+|||+..+|.++|+++||..+..+...+.|.+.++.+...++++
T Consensus 474 e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~ 553 (885)
T 3b8c_A 474 GAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEE 553 (885)
T ss_dssp CCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHH
T ss_pred ccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHH
Confidence 89999999999999999999999999999999999999999999999999999987666667778877766667778899
Q ss_pred HHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 241 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
++++.++|++++|+||.++|+.||++|+.|+|+|||+||+|||++|||||||++|+++++++||+|+.+++|+.|+.++.
T Consensus 554 ~~~~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~ 633 (885)
T 3b8c_A 554 LIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVL 633 (885)
T ss_dssp HHHTSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHH
T ss_pred HHhhCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhhhHHHHHHH
Q 012767 321 ISRAIFQRMRNYMVRGIDGLSSTEFIQV-LELNFLFTLDTVIAI 363 (456)
Q Consensus 321 ~~R~i~~~i~~~~~y~~~~~~~~i~l~~-~~~~~~~pl~~~~~l 363 (456)
+||++|+||++|+.|.+..+...++..+ ..+.+.+|+.+++++
T Consensus 634 ~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~~~~~~l~p~~il 677 (885)
T 3b8c_A 634 TSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVL 677 (885)
T ss_dssp THHHHHHHHHHHHHHHHHHTTTTTSTTHHHHSSCSSCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcCcCHHHHH
Confidence 9999999999999999876443222111 112233566666665
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-62 Score=542.71 Aligned_cols=349 Identities=40% Similarity=0.657 Sum_probs=286.9
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCC--ChHHHHHHHhhcCc---hhh
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENL--DVIDAAIVGMLADP---KEA 75 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~--~pi~~ai~~~~~~~---~~~ 75 (456)
+.++|+||++|+||||||||||+|+|+|.+++. ..++++++++..++.++...+. ||++.|++.++... ...
T Consensus 363 ~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~---~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~ 439 (920)
T 1mhs_A 363 LSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSV 439 (920)
T ss_dssp TTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBC---CSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGG
T ss_pred CchhhhhccCcEEEECCCCCccccceeEEEEee---cCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhh
Confidence 478999999999999999999999999988642 2355666777666665543333 79999999865321 123
Q ss_pred hhcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCC----chhhhHHHHHHHHHHHccCeeeEEeeee
Q 012767 76 RADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK----SKIGRKVNAVINKFAERGLRSLAVAYQE 151 (456)
Q Consensus 76 ~~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~----~~~~~~~~~~i~~~~~~Glr~l~vA~~~ 151 (456)
...|+.++++||++.+|+|+++++..+|+.+.++||+|+.|+++|... ++..+.+.+.+++|+++|+|++++|++.
T Consensus 440 ~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~ 519 (920)
T 1mhs_A 440 LSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR 519 (920)
T ss_dssp GSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS
T ss_pred ccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec
Confidence 456789999999999999999887667887889999999999999742 2345567788999999999999999984
Q ss_pred cCCCCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--CccccCCch
Q 012767 152 VPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDR 229 (456)
Q Consensus 152 ~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~--~~~l~g~~~ 229 (456)
.|++|+|+|+++++|||||+++++|+.|+++||+|+|+|||+..+|.++|+++||..+.++ ...+.|.
T Consensus 520 --------~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~-- 589 (920)
T 1mhs_A 520 --------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG-- 589 (920)
T ss_dssp --------SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--
T ss_pred --------cccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc--
Confidence 2568999999999999999999999999999999999999999999999999999754322 1233443
Q ss_pred hhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeC
Q 012767 230 DESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 309 (456)
Q Consensus 230 ~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~ 309 (456)
+.+...++.+.+++..+|++++|+||.++|+.||++|+.|+|+|||+||+|||++|||||||++|+++++++||+|+++
T Consensus 590 -~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~ 668 (920)
T 1mhs_A 590 -GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLA 668 (920)
T ss_dssp -CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESS
T ss_pred -ccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcC
Confidence 2233344566677888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhHHHHHHH
Q 012767 310 PGLNVIITAVLISRAIFQRMRNYMVRGIDGLSST-EFIQVLELNFLFTLDTVIAI 363 (456)
Q Consensus 310 ~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~-i~l~~~~~~~~~pl~~~~~l 363 (456)
++|+.|+.++++||++|+||++++.|.+..+... +++.+..++..+|+++++++
T Consensus 669 ~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~l~~~~il 723 (920)
T 1mhs_A 669 PGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNRSLNIELVV 723 (920)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHH
Confidence 9999999999999999999999999988654432 33333233334556666665
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-59 Score=527.18 Aligned_cols=362 Identities=25% Similarity=0.393 Sum_probs=289.6
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeec--cc-CC-----------CCh--HHHHHHHHHhccc------C--
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEI--FA-GG-----------VDA--DTVVLMAARASQV------E-- 56 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~--~~-~~-----------~~~--~~il~~aa~~~~~------~-- 56 (456)
++++|+||++|+||||||||||+|+|+|.++++.. +. .+ .+. ..++..++.|+.. +
T Consensus 366 ~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~h 445 (1028)
T 2zxe_A 366 LEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNV 445 (1028)
T ss_dssp TTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCEECTTCTTS
T ss_pred chHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCeeecCCCCC
Confidence 47899999999999999999999999999976521 10 00 011 2456666665421 1
Q ss_pred -------CCChHHHHHHHhhcC----chhhhhcceEEEeecCCCCCceEEEEEEec---CCcEEEEEcCcHHHHHhhccC
Q 012767 57 -------NLDVIDAAIVGMLAD----PKEARADIQEVHFLPFDPTGKRTALTYIDS---EGKMHRVTKGSPEQILNLLHN 122 (456)
Q Consensus 57 -------~~~pi~~ai~~~~~~----~~~~~~~~~~~~~~pf~~~~k~~~v~~~~~---~g~~~~~~KGa~e~Il~~~~~ 122 (456)
..||.|.|++.++.. ....+..|+.++.+||+|.+|||+++++.. +|+.+.++||+|+.|+++|..
T Consensus 446 p~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~ 525 (1028)
T 2zxe_A 446 PILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCST 525 (1028)
T ss_dssp CGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEE
T ss_pred ccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhh
Confidence 237899999987642 233456789999999999999999998863 577889999999999999963
Q ss_pred ----------CchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCc-----------CCCCCCceEeEecccCCCCCcchH
Q 012767 123 ----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-----------ESSGSPWQFIGLIPLFDPPIHDSA 181 (456)
Q Consensus 123 ----------~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~-----------~~~e~~~~~lG~i~l~d~~r~~~~ 181 (456)
+++..+.+.+.+++|+++|+||+++|++.+++..+ +..|.+++|+|+++++|||||+++
T Consensus 526 ~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~ 605 (1028)
T 2zxe_A 526 ILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVP 605 (1028)
T ss_dssp ECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTTHH
T ss_pred hhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccCCCCChhHH
Confidence 22345667888999999999999999998865321 224689999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC----------------------CccccCCchhhhhhcCChH
Q 012767 182 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALSGQDRDESIVALPVD 239 (456)
Q Consensus 182 ~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~----------------------~~~l~g~~~~~~~~~~~~~ 239 (456)
++|+.|+++||+|+|+|||+..+|.++|+++||..+... ..++.|.+.+. +....++
T Consensus 606 ~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~-~~~~~l~ 684 (1028)
T 2zxe_A 606 DAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD-LSTEVLD 684 (1028)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT-CCHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh-CCHHHHH
Confidence 999999999999999999999999999999999743211 01222222111 1111234
Q ss_pred HHHhhcc--cccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHH
Q 012767 240 ELIEKAD--GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 240 ~~~~~~~--v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~ 316 (456)
+++.... +|++++|+||..+|+.+|+.|+.|+|+|||+||+|||++|||||||+ +|+++++++||+|+.+++|++|+
T Consensus 685 ~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~ 764 (1028)
T 2zxe_A 685 DILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIV 764 (1028)
T ss_dssp HHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHH
T ss_pred HHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHH
Confidence 4555554 89999999999999999999999999999999999999999999999 79999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhHHHHHHH
Q 012767 317 TAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN--FLFTLDTVIAI 363 (456)
Q Consensus 317 ~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~--~~~pl~~~~~l 363 (456)
.+|++||++|+||++++.|++..++..++..+..++ ..+|+++++++
T Consensus 765 ~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil 813 (1028)
T 2zxe_A 765 TGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTIL 813 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHH
Confidence 999999999999999999999877666655544433 45788888887
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-58 Score=520.54 Aligned_cols=362 Identities=24% Similarity=0.348 Sum_probs=288.7
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCC-----------CC-----hHHHHHHHHHhccc---------
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGG-----------VD-----ADTVVLMAARASQV--------- 55 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~-----------~~-----~~~il~~aa~~~~~--------- 55 (456)
++++|+||++++||||||||||+|+|+|.++++...... .+ ...++..++.|+..
T Consensus 371 l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~ 450 (1034)
T 3ixz_A 371 LEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAV 450 (1034)
T ss_pred hHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhccceeccCcCCC
Confidence 478999999999999999999999999999875321100 00 12455555555321
Q ss_pred ------CCCChHHHHHHHhhc----CchhhhhcceEEEeecCCCCCceEEEEEEec---CCcEEEEEcCcHHHHHhhccC
Q 012767 56 ------ENLDVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDS---EGKMHRVTKGSPEQILNLLHN 122 (456)
Q Consensus 56 ------~~~~pi~~ai~~~~~----~~~~~~~~~~~~~~~pf~~~~k~~~v~~~~~---~g~~~~~~KGa~e~Il~~~~~ 122 (456)
...||.|.|++.++. +....+..++.++.+||+|.+|+|++++... +++...++|||||.|+++|..
T Consensus 451 ~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~ 530 (1034)
T 3ixz_A 451 PVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSS 530 (1034)
T ss_pred cccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHH
Confidence 124789999987653 3334567788999999999999988776643 367899999999999999962
Q ss_pred ----------CchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCc-----------CCCCCCceEeEecccCCCCCcchH
Q 012767 123 ----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-----------ESSGSPWQFIGLIPLFDPPIHDSA 181 (456)
Q Consensus 123 ----------~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~-----------~~~e~~~~~lG~i~l~d~~r~~~~ 181 (456)
+++.++.+.+.+++|+.+|+||+++|++.+++..+ +..|++++|+|+++++||||++++
T Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~ 610 (1034)
T 3ixz_A 531 ILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVP 610 (1034)
T ss_pred hhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEEeccCCCchhHH
Confidence 23445678888999999999999999998875421 234789999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC----------------------CccccCCchhhhhhcCChH
Q 012767 182 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALSGQDRDESIVALPVD 239 (456)
Q Consensus 182 ~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~----------------------~~~l~g~~~~~~~~~~~~~ 239 (456)
++|+.|+++||+|+|+|||+..+|.++|+++||..+... ..++.|.+... +...++.
T Consensus 611 ~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~-~~~~~l~ 689 (1034)
T 3ixz_A 611 DAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKD-MDPSELV 689 (1034)
T ss_pred HHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhh-CCHHHHH
Confidence 999999999999999999999999999999999643210 11222222211 1111233
Q ss_pred HHHhhc--ccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHH
Q 012767 240 ELIEKA--DGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 240 ~~~~~~--~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~ 316 (456)
+.+... .+|++++|+||.++|+.+|+.|+.|+|+|||.||+|||++||+||||+ +|+++++++||+|+.++++++|+
T Consensus 690 ~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~ 769 (1034)
T 3ixz_A 690 EALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIV 769 (1034)
T ss_pred HHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHH
Confidence 444443 389999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhHHHHHHH
Q 012767 317 TAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN--FLFTLDTVIAI 363 (456)
Q Consensus 317 ~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~--~~~pl~~~~~l 363 (456)
.+|++||++|+||++++.|.+..+...++..+...+ ..+|+.++++|
T Consensus 770 ~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL 818 (1034)
T 3ixz_A 770 TGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITIL 818 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 999999999999999999999877766555443322 56789999987
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-58 Score=522.24 Aligned_cols=362 Identities=27% Similarity=0.389 Sum_probs=286.2
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeec--------------ccCCCCh-------------------HHHHH
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEI--------------FAGGVDA-------------------DTVVL 47 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~--------------~~~~~~~-------------------~~il~ 47 (456)
++++|+||++|+||||||||||+|+|+|.++++.. ...++.+ ..++.
T Consensus 337 ~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~ 416 (995)
T 3ar4_A 337 LPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELAT 416 (995)
T ss_dssp TTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHH
T ss_pred chhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccccccccccccccHHHHHHHH
Confidence 47899999999999999999999999999876521 0000111 12333
Q ss_pred HHHHhcccC------------CCChHHHHHHHhhcCc-------h-------------hhhhcceEEEeecCCCCCceEE
Q 012767 48 MAARASQVE------------NLDVIDAAIVGMLADP-------K-------------EARADIQEVHFLPFDPTGKRTA 95 (456)
Q Consensus 48 ~aa~~~~~~------------~~~pi~~ai~~~~~~~-------~-------------~~~~~~~~~~~~pf~~~~k~~~ 95 (456)
.++.|+... ..||.|.|++.++.+. . ..+..|+.++.+||+|.+|||+
T Consensus 417 ~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~ms 496 (995)
T 3ar4_A 417 ICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMS 496 (995)
T ss_dssp HHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEE
T ss_pred HHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCceEEEeecCCCCCeeE
Confidence 445543211 1479999998654211 0 1245688999999999999999
Q ss_pred EEEEecCC-----cEEEEEcCcHHHHHhhccC----------CchhhhHHHHHHHHH--HHccCeeeEEeeeecCCCC--
Q 012767 96 LTYIDSEG-----KMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKF--AERGLRSLAVAYQEVPEGS-- 156 (456)
Q Consensus 96 v~~~~~~g-----~~~~~~KGa~e~Il~~~~~----------~~~~~~~~~~~i~~~--~~~Glr~l~vA~~~~~~~~-- 156 (456)
++++..+| +...++||+|+.|+++|.. +++..+.+.+.+++| +++|+||+++||+.++..+
T Consensus 497 vi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~ 576 (995)
T 3ar4_A 497 VYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREE 576 (995)
T ss_dssp EEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGG
T ss_pred EEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCccccc
Confidence 99987666 5688999999999999963 123445677888899 9999999999999876432
Q ss_pred --------cCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccccC
Q 012767 157 --------KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSG 226 (456)
Q Consensus 157 --------~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~--~~~~l~g 226 (456)
++..|++++|+|+++++||+||+++++|+.|+++||+++|+|||+..+|.++|+++||..... ...++.|
T Consensus 577 ~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g 656 (995)
T 3ar4_A 577 MVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTG 656 (995)
T ss_dssp CCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEH
T ss_pred cccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEc
Confidence 123478999999999999999999999999999999999999999999999999999975321 1234444
Q ss_pred CchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEE
Q 012767 227 QDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 306 (456)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDiv 306 (456)
.+.+. +...+..+++.+..+|+|++|+||.++|+.+|++|+.|+|+|||+||+|||++||+||||++|+++++++||+|
T Consensus 657 ~~~~~-l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg~g~~~ak~aAd~v 735 (995)
T 3ar4_A 657 REFDD-LPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMV 735 (995)
T ss_dssp HHHHT-SCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEETTSCHHHHHTCSEE
T ss_pred hhhhh-CCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeCCCCHHHHHhCCEE
Confidence 33321 11112456677788999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHh-hhhhHHHHHHH
Q 012767 307 LTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVL-ELN-FLFTLDTVIAI 363 (456)
Q Consensus 307 l~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~-~~~-~~~pl~~~~~l 363 (456)
+.+++|..|+.++++||++|+||++++.|.+..+...++..+. .++ ...|+.+++++
T Consensus 736 l~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil 794 (995)
T 3ar4_A 736 LADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLL 794 (995)
T ss_dssp ETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHH
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHH
Confidence 9999999999999999999999999999998876554433322 222 33577777776
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-51 Score=448.46 Aligned_cols=321 Identities=25% Similarity=0.282 Sum_probs=273.6
Q ss_pred hHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcceE
Q 012767 2 SAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQE 81 (456)
Q Consensus 2 ~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~ 81 (456)
+++|+|+++|+||||||||||+|+|+|.++. ..+.+.++++.+++..+..++| |++.|++.++.+. ++..
T Consensus 412 ~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~----~~~~~~~~~l~~aa~le~~s~h-Pla~Aiv~~a~~~-----~~~~ 481 (736)
T 3rfu_A 412 EALERMEKVNTLVVDKTGTLTEGHPKLTRIV----TDDFVEDNALALAAALEHQSEH-PLANAIVHAAKEK-----GLSL 481 (736)
T ss_dssp HHHHHHTSCCEEEECCBTTTBCSSCEEEEEE----ESSSCHHHHHHHHHHHHHSSCC-HHHHHHHHHHHTT-----CCCC
T ss_pred HHHHHhcCCCEEEEeCCCCCcCCceEEEEEE----ecCCCHHHHHHHHHHHhhcCCC-hHHHHHHHHHHhc-----CCCc
Confidence 6899999999999999999999999999865 3567889999999998887765 9999999887532 2223
Q ss_pred EEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCC
Q 012767 82 VHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSG 161 (456)
Q Consensus 82 ~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e 161 (456)
....+|++..++..... .+|+ .+.+|+++.+.+.... ...+.+..++++.+|+|++++|++.
T Consensus 482 ~~~~~f~~~~g~gv~~~--~~g~--~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~G~~vl~va~d~---------- 543 (736)
T 3rfu_A 482 GSVEAFEAPTGKGVVGQ--VDGH--HVAIGNARLMQEHGGD----NAPLFEKADELRGKGASVMFMAVDG---------- 543 (736)
T ss_dssp CCCSCCCCCTTTEEEEC--SSSS--CEEEESHHHHHHHCCC----CHHHHHHHHHHHHTTCEEEEEEETT----------
T ss_pred cCcccccccCCceEEEE--ECCE--EEEEcCHHHHHHcCCC----hhHHHHHHHHHHhcCCeEEEEEECC----------
Confidence 33457777776653322 3454 3567999988765432 2345667889999999999999965
Q ss_pred CCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHH
Q 012767 162 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 241 (456)
Q Consensus 162 ~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~ 241 (456)
+++|+++++|++|++++++|+.|+++|++++|+|||+..+|..+++++||.
T Consensus 544 ---~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~-------------------------- 594 (736)
T 3rfu_A 544 ---KTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK-------------------------- 594 (736)
T ss_dssp ---EEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC--------------------------
T ss_pred ---EEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC--------------------------
Confidence 999999999999999999999999999999999999999999999999996
Q ss_pred HhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 242 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 242 ~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
+++++++|++|.++|+.+|++|+.|+|+|||.||+|||+.||+||||+++++.++++||+|+.++++.+|+.++++
T Consensus 595 ----~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~ 670 (736)
T 3rfu_A 595 ----KVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRL 670 (736)
T ss_dssp ----CEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHH
T ss_pred ----EEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHhcccCccccchHHHHHHH
Q 012767 322 SRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLF--TLDTVIAILQTAFTSKKDFGKEERELLW 383 (456)
Q Consensus 322 ~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~~~~--pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 383 (456)
||++++||++|+.|++.++..++.+.++.++.++ .++|+.-.+.|.+++..+..+++|...|
T Consensus 671 sr~t~~~i~qnl~~a~~yN~~~iplAag~l~p~~G~~l~P~~aa~~m~~Ssv~Vv~nslrl~~~ 734 (736)
T 3rfu_A 671 SESTMSNIRQNLFFAFIYNVLGVPLAAGVLYPLTGLLLSPMIAAAAMALSSVSVIINALRLKRV 734 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTSSCCCCHHHHHHHHHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHhhHHHHHHHHHHhccc
Confidence 9999999999999999999999888876655332 2345555577888888888877766544
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-49 Score=433.96 Aligned_cols=318 Identities=24% Similarity=0.281 Sum_probs=257.9
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcce
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ 80 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~ 80 (456)
.+++|+||++|++|||||||||+|+|+|.++.. .+.+.++++.+++.++..++| |++.|++.++.+.+......+
T Consensus 395 ~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~----~~~~~~~~l~~aa~~e~~s~h-P~~~Ai~~~a~~~~~~~~~~~ 469 (723)
T 3j09_A 395 ADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRSEH-PIAEAIVKKALEHGIELGEPE 469 (723)
T ss_dssp TTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEE----SSSCHHHHHHHHHHHHTTCCS-HHHHHHHHHHHHTTCCCCSCC
T ss_pred hHHHHHhhcCCEEEEcCCCccccCceEEEEEEe----CCCCHHHHHHHHHHHhccCCC-chhHHHHHHHHhcCCCcCCcc
Confidence 368999999999999999999999999998753 256788999999998887765 999999987643221111111
Q ss_pred EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCC
Q 012767 81 EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESS 160 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~ 160 (456)
..+..|. +.. . ...+.+|+++.+.+.. ....+.+...+++++.+|+|+++++++.
T Consensus 470 ~~~~~~g-----~g~-~-------~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~va~~~--------- 524 (723)
T 3j09_A 470 KVEVIAG-----EGV-V-------ADGILVGNKRLMEDFG---VAVSNEVELALEKLEREAKTAVIVARNG--------- 524 (723)
T ss_dssp CCEEETT-----TEE-E-------ETTEEEECHHHHHHTT---CCCCHHHHHHHHHHHTTTCEEEEEEETT---------
T ss_pred ceEEecC-----Cce-E-------EEEEEECCHHHHHhcC---CCccHHHHHHHHHHHhcCCeEEEEEECC---------
Confidence 1111111 110 0 0236679998876532 2344567788899999999999999864
Q ss_pred CCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHH
Q 012767 161 GSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240 (456)
Q Consensus 161 e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 240 (456)
+++|+++++|++||+++++|+.|+++|++++|+|||+..+|..+++++|+.
T Consensus 525 ----~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------- 575 (723)
T 3j09_A 525 ----RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------- 575 (723)
T ss_dssp ----EEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-------------------------
T ss_pred ----EEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc-------------------------
Confidence 999999999999999999999999999999999999999999999999995
Q ss_pred HHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 241 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.+|++++|++|.++|+.+|++ +.|+|+|||.||+|||+.||+||||+++++.++++||+|+.++++.+++.+++
T Consensus 576 -----~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~ 649 (723)
T 3j09_A 576 -----LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 649 (723)
T ss_dssp -----EEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHH
T ss_pred -----EEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHH
Confidence 479999999999999999988 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHhcccCccccchHHHHHHH
Q 012767 321 ISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFL--FTLDTVIAILQTAFTSKKDFGKEERELLW 383 (456)
Q Consensus 321 ~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~~~--~pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 383 (456)
+||++|+|+++|+.|++.++...+.+.++.++++ +.++|..-.+.|.+++..+..++.|...|
T Consensus 650 ~~r~~~~~i~~nl~~a~~~n~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~~ 714 (723)
T 3j09_A 650 LSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRNY 714 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCCSCCHHHHHHHHHTHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCHHHHHHHHhccHHHHHHHHHHhccC
Confidence 9999999999999999988887777666554321 12334334456667777666666655443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-49 Score=427.21 Aligned_cols=318 Identities=24% Similarity=0.282 Sum_probs=257.1
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcce
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ 80 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~ 80 (456)
.+++|+||++|++|||||||||+|+|+|.++.. .+.+.++++.+++.++..++| |++.|++.++.+.+......+
T Consensus 317 ~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~----~~~~~~~~l~~aa~~e~~s~h-Pla~Aiv~~a~~~g~~~~~~~ 391 (645)
T 3j08_A 317 ADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRSEH-PIAEAIVKKALEHGIELGEPE 391 (645)
T ss_dssp TTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEE----SSSCHHHHHHHHHHHHTTCCS-HHHHHHHHHHHHTTCCCCSCC
T ss_pred chHHHHhhCCCEEEEcCcccccCCCeEEEEEEe----CCCCHHHHHHHHHHHhhcCCC-hhHHHHHHHHHhcCCCcCCcc
Confidence 368999999999999999999999999998753 256788999999999887765 999999987643221111111
Q ss_pred EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCC
Q 012767 81 EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESS 160 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~ 160 (456)
..+..|. +... ...+.+|+++.+.+.. ...++.+....++++.+|+|+++++++.
T Consensus 392 ~~~~~~g-----~g~~--------~~~v~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~l~va~~~--------- 446 (645)
T 3j08_A 392 KVEVIAG-----EGVV--------ADGILVGNKRLMEDFG---VAVSNEVELALEKLEREAKTAVIVARNG--------- 446 (645)
T ss_dssp CCEEETT-----TEEE--------ETTEEEECHHHHHHTT---CCCCHHHHHHHHHHHTTTCCCEEEEETT---------
T ss_pred ceEEecC-----CceE--------EEEEEECCHHHHHhcC---CCccHHHHHHHHHHHhcCCeEEEEEECC---------
Confidence 1111111 1100 0236679998876532 2345567788899999999999999864
Q ss_pred CCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHH
Q 012767 161 GSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240 (456)
Q Consensus 161 e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 240 (456)
+++|+++++|++||+++++|+.|+++|++++|+|||+..+|..+++++|+.
T Consensus 447 ----~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------- 497 (645)
T 3j08_A 447 ----RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------- 497 (645)
T ss_dssp ----EEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-------------------------
T ss_pred ----EEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-------------------------
Confidence 999999999999999999999999999999999999999999999999995
Q ss_pred HHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 241 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.+|++++|++|.++|+.++++ +.|+|+|||.||+|||+.||+||||+++++.++++||+|+.++++.+++.+++
T Consensus 498 -----~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~ 571 (645)
T 3j08_A 498 -----LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 571 (645)
T ss_dssp -----EEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHH
T ss_pred -----EEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHH
Confidence 479999999999999999998 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHhcccCccccchHHHHHHH
Q 012767 321 ISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFL--FTLDTVIAILQTAFTSKKDFGKEERELLW 383 (456)
Q Consensus 321 ~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~~~--~pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 383 (456)
+||++|+|+++|+.|++.++...+.+.++.++++ +.++|..-.+.|.+++..+..++.|...|
T Consensus 572 ~~r~~~~~i~~nl~~a~~~N~~~i~la~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~~ 636 (645)
T 3j08_A 572 LSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRNY 636 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTCCCSCCHHHHHHHHHTHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccccCHHHHHHHHhcchHHHHHhhHHhccC
Confidence 9999999999999999988877776665543321 12333333456666776666666555433
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=288.08 Aligned_cols=244 Identities=20% Similarity=0.299 Sum_probs=193.2
Q ss_pred hHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcceE
Q 012767 2 SAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQE 81 (456)
Q Consensus 2 ~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~ 81 (456)
+++|.|+++++||||||||||+|+|.|.++. +.++++.+++..+..++| |++.|+..++.+.+......+.
T Consensus 20 ~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~~s~h-p~a~ai~~~~~~~g~~~~~~~~ 90 (263)
T 2yj3_A 20 NVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEALSSH-PIAKAIVKYAKEQGVKILEVKD 90 (263)
Confidence 5899999999999999999999999998742 456788888888877665 9999999876533211000111
Q ss_pred EEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCC
Q 012767 82 VHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSG 161 (456)
Q Consensus 82 ~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e 161 (456)
+..++..+... . .++ ..+..|+++ +|.+ +.++++.
T Consensus 91 ~~~~~G~g~~~----~---~~~--~~~~~G~~~-------------------------~~~~-~~~~~~~---------- 125 (263)
T 2yj3_A 91 FKEISGIGVRG----K---ISD--KIIEVKKAE-------------------------NNND-IAVYING---------- 125 (263)
Confidence 11111110000 0 001 111122221 3444 5556654
Q ss_pred CCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHH
Q 012767 162 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 241 (456)
Q Consensus 162 ~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~ 241 (456)
.+.|.+.+.|+++|++.++|+.|++.|++++|+|||+...+..+++.+|+.
T Consensus 126 ---~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~-------------------------- 176 (263)
T 2yj3_A 126 ---EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ-------------------------- 176 (263)
Confidence 889999999999999999999999999999999999999999999999985
Q ss_pred HhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 242 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 242 ~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
++|+.+.|+.|..+++.++..+..|+|||||.||++|++.||+|++++++++.+.+.+|+++..+++..+..++.+
T Consensus 177 ----~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v~~~~~l~~l~~~l~~ 252 (263)
T 2yj3_A 177 ----EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKN 252 (263)
Confidence 3577888999999999999998999999999999999999999999998889999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 012767 322 SRAIFQRMRNY 332 (456)
Q Consensus 322 ~R~i~~~i~~~ 332 (456)
+|+++++|++|
T Consensus 253 ~r~~~~~i~~n 263 (263)
T 2yj3_A 253 RKRLSNAIPSN 263 (263)
Confidence 99999999875
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=243.29 Aligned_cols=272 Identities=29% Similarity=0.390 Sum_probs=208.7
Q ss_pred hHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcceE
Q 012767 2 SAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQE 81 (456)
Q Consensus 2 ~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~ 81 (456)
+++|+|++++.||||+|||||.|+++|.++.. + .+ +.++++.+++.++..+.+ ++..++..++...+........
T Consensus 5 ~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~--~-~~-~~~~~~~~~~~~~~~s~~-~~~~a~~~~~~~~g~~~~~~~~ 79 (280)
T 3skx_A 5 QAFERAKDLQAVIFDKTGTLTEGRFGVTDIVG--F-NH-SEDELLQIAASLEARSEH-PIAAAIVEEAEKRGFGLTEVEE 79 (280)
T ss_dssp CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEE--S-SS-CHHHHHHHHHHHHTTCCS-HHHHHHHHHHHHTTCCCCCCEE
T ss_pred HHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEe--c-CC-CHHHHHHHHHHhhccCCC-HHHHHHHHHHHhcCCCCCCccc
Confidence 58999999999999999999999999998542 2 23 788899988888877665 8998888766432211112222
Q ss_pred EEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCC
Q 012767 82 VHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSG 161 (456)
Q Consensus 82 ~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e 161 (456)
+..++..+ .... .++. .+..|+++.+........ .....+...+.+.+.+++..
T Consensus 80 ~~~~~g~~----~~~~---~~~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~---------- 133 (280)
T 3skx_A 80 FRAIPGKG----VEGI---VNGR--RYMVVSPGYIRELGIKTD-------ESVEKLKQQGKTVVFILKNG---------- 133 (280)
T ss_dssp EEEETTTE----EEEE---ETTE--EEEEECHHHHHHTTCCCC-------TTHHHHHTTTCEEEEEEETT----------
T ss_pred eeecCCCE----EEEE---ECCE--EEEEecHHHHHHcCCCch-------HHHHHHHhCCCeEEEEEECC----------
Confidence 33332211 1111 1332 334577777765442211 23456778899999888765
Q ss_pred CCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHH
Q 012767 162 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 241 (456)
Q Consensus 162 ~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~ 241 (456)
.++|.+.+.++++|++.++++.|++.|+++.++||+....+..+.+.+|+.
T Consensus 134 ---~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~-------------------------- 184 (280)
T 3skx_A 134 ---EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD-------------------------- 184 (280)
T ss_dssp ---EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--------------------------
T ss_pred ---EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh--------------------------
Confidence 899999999999999999999999999999999999999999999999985
Q ss_pred HhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 242 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 242 ~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
..|..+.|.+|...++.+.+.. .++|+||+.||++|++.||+|++|+++++..+..||+++..+++.++..++..
T Consensus 185 ----~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~~l~~ 259 (280)
T 3skx_A 185 ----DYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAAIVEL 259 (280)
T ss_dssp ----EEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHHHHHH
T ss_pred ----hHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHHHHHH
Confidence 3578888999999999998876 67999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012767 322 SRAIFQRMRNYMVRGID 338 (456)
Q Consensus 322 ~R~i~~~i~~~~~y~~~ 338 (456)
+|+++.++++++.|++.
T Consensus 260 ~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 260 SRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHTCCC-----------
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999999864
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-29 Score=244.23 Aligned_cols=265 Identities=27% Similarity=0.394 Sum_probs=203.7
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcce
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ 80 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~ 80 (456)
.+++|+|+++++||||||||||.+.+.+.++.. . .+ +.++++.+++.++..++| |++.|+..++...+......+
T Consensus 23 ~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~--~-~~-~~~~~l~~~~~~e~~s~h-p~~~a~~~~~~~~g~~~~~~~ 97 (287)
T 3a1c_A 23 ADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVP--L-NG-DERELLRLAAIAERRSEH-PIAEAIVKKALEHGIELGEPE 97 (287)
T ss_dssp TTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEE--S-SS-CHHHHHHHHHHHTTTCCS-HHHHHHHHHHHHTTCCCCCCS
T ss_pred cHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEe--C-CC-CHHHHHHHHHHHhhcCCC-HHHHHHHHHHHhcCCCccccc
Confidence 368999999999999999999999999987543 2 24 788999999988887665 999999887642211000011
Q ss_pred EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCC
Q 012767 81 EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESS 160 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~ 160 (456)
.+..++.. . ... ..+.+|+++.+.+... ..++.+....+.+..+|.++++++++.
T Consensus 98 ~~~~~~G~-----~---~~~-----~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~i~~~~d~--------- 152 (287)
T 3a1c_A 98 KVEVIAGE-----G---VVA-----DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG--------- 152 (287)
T ss_dssp CEEEETTT-----E---EEE-----TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHHTTCEEEEEEETT---------
T ss_pred cceeecCC-----C---eEE-----EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhCCCeEEEEEECC---------
Confidence 11111110 0 010 1244677666543221 122345566778889999999999865
Q ss_pred CCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHH
Q 012767 161 GSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240 (456)
Q Consensus 161 e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 240 (456)
.+++.+...++++|++.++++.|++.|+++.++||++...+..+.+.+|+.
T Consensus 153 ----~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~------------------------- 203 (287)
T 3a1c_A 153 ----RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------- 203 (287)
T ss_dssp ----EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-------------------------
T ss_pred ----EEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc-------------------------
Confidence 899999999999999999999999999999999999999999999999985
Q ss_pred HHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 241 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.+|..+.|+.|...++.++.. ..|+|+||+.||++|++.||++++++++.+..+..+|+++.++++..+..++.
T Consensus 204 -----~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~~l~~~l~ 277 (287)
T 3a1c_A 204 -----LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 277 (287)
T ss_dssp -----EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEEESSSCTHHHHHHHH
T ss_pred -----eeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEEEeCCCHHHHHHHHH
Confidence 357777899999999999888 89999999999999999999999999877777788999998889999999999
Q ss_pred HHHHHHHHHH
Q 012767 321 ISRAIFQRMR 330 (456)
Q Consensus 321 ~~R~i~~~i~ 330 (456)
.+|+++++|+
T Consensus 278 ~~~~~~~~i~ 287 (287)
T 3a1c_A 278 LSRKTMSKIK 287 (287)
T ss_dssp TTC-------
T ss_pred HHHHHHHhhC
Confidence 9999999885
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=164.31 Aligned_cols=138 Identities=23% Similarity=0.345 Sum_probs=116.5
Q ss_pred CCCChHHHHHHHHHhc--ccCCCChHHHHHHHhhcCch--hhhhcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcH
Q 012767 38 GGVDADTVVLMAARAS--QVENLDVIDAAIVGMLADPK--EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSP 113 (456)
Q Consensus 38 ~~~~~~~il~~aa~~~--~~~~~~pi~~ai~~~~~~~~--~~~~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~ 113 (456)
.|.+.++++.+|++++ +....||+|.||+.++.... ..+..|+.+..+||+|.+|||++++++.+|+..+++||||
T Consensus 11 ~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGAp 90 (170)
T 3gwi_A 11 SGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGAL 90 (170)
T ss_dssp TSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECH
T ss_pred CCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCc
Confidence 4788899999999998 55567999999998875322 2357899999999999999999999877788899999999
Q ss_pred HHHHhhccC----------CchhhhHHHHHHHHHHHccCeeeEEeeeecCCCC---cCCCCCCceEeEecccCCC
Q 012767 114 EQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS---KESSGSPWQFIGLIPLFDP 175 (456)
Q Consensus 114 e~Il~~~~~----------~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~---~~~~e~~~~~lG~i~l~d~ 175 (456)
|.|+++|+. +++.++.+.+.+++|+++|+|||+||++.++..+ ....|++|+|+|+++|.|.
T Consensus 91 E~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 91 QEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp HHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred HHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 999999973 3455678899999999999999999999987643 2346899999999999885
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2.1e-19 Score=176.64 Aligned_cols=145 Identities=12% Similarity=0.029 Sum_probs=114.6
Q ss_pred cCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--CccccCCchhhhhhcCChHHHHhhccccc
Q 012767 172 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDELIEKADGFA 249 (456)
Q Consensus 172 l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~--~~~l~g~~~~~~~~~~~~~~~~~~~~v~a 249 (456)
..+++||+++++++.|+++|++|+|+|||...++.++++++|+...... ...+..++.. ....... ...+.++
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~-~~~~~~~----~~i~~~~ 212 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENG-VLKGFKG----ELIHVFN 212 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTS-BEEEECS----SCCCTTC
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccc-eeEeccc----cccchhh
Confidence 4689999999999999999999999999999999999999998643110 0001000000 0000000 0124678
Q ss_pred ccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhh---hcCeeEEec-------cccHHHhhcccEEeeCCCchHHHHHH
Q 012767 250 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK---KADIGIAVA-------DATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 250 ~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk---~AdvGIa~~-------~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
+..|.+|...+..+++.++.|+|+|||+||+||++ .||+||+|| ++++.+++++||||+++++..++.+|
T Consensus 213 k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~i 292 (297)
T 4fe3_A 213 KHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 292 (297)
T ss_dssp HHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred cccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHH
Confidence 88899999999999999999999999999999954 999999999 78999999999999999999999888
Q ss_pred HH
Q 012767 320 LI 321 (456)
Q Consensus 320 ~~ 321 (456)
..
T Consensus 293 l~ 294 (297)
T 4fe3_A 293 LQ 294 (297)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.52 E-value=1.5e-14 Score=132.57 Aligned_cols=124 Identities=22% Similarity=0.398 Sum_probs=106.9
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHH
Q 012767 183 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 262 (456)
Q Consensus 183 ~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 262 (456)
+|+.|++.|+++.++||+....+..+++.+|+. .+|..+ ..|.+.++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~------------------------------~~f~~~--~~K~~~~~~ 101 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE------------------------------HLFQGR--EDKLVVLDK 101 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS------------------------------EEECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH------------------------------HHhcCc--CChHHHHHH
Confidence 899999999999999999999999999999985 234333 667777776
Q ss_pred Hhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCC----chHHHHHHHHHHHHHHHHHHHHH
Q 012767 263 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG----LNVIITAVLISRAIFQRMRNYMV 334 (456)
Q Consensus 263 lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~----l~~i~~~i~~~R~i~~~i~~~~~ 334 (456)
+.++ ...|+|+||+.||++|++.|+++++++++.+.+++.||+++.+++ +..+.+.+..+|..+++|++++.
T Consensus 102 ~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~ 181 (189)
T 3mn1_A 102 LLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYL 181 (189)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTS
T ss_pred HHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHh
Confidence 6654 467999999999999999999999999999999999999998774 66788888899999999999988
Q ss_pred HHHH
Q 012767 335 RGID 338 (456)
Q Consensus 335 y~~~ 338 (456)
|.+.
T Consensus 182 ~~~~ 185 (189)
T 3mn1_A 182 EGHH 185 (189)
T ss_dssp TTC-
T ss_pred cccc
Confidence 8654
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=3.5e-13 Score=119.68 Aligned_cols=140 Identities=21% Similarity=0.280 Sum_probs=97.5
Q ss_pred cccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCc-hhhhhcce--EEEeecCCCCCce
Q 012767 17 KTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADP-KEARADIQ--EVHFLPFDPTGKR 93 (456)
Q Consensus 17 KTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~-~~~~~~~~--~~~~~pf~~~~k~ 93 (456)
..||+|.|++.|..+.. ..+.+.++++.+|++++..+.| |+++||+.++.+. +......+ ..++.||++..++
T Consensus 13 ~~~tit~gnr~vt~v~~---~~g~~e~elL~lAAs~E~~SeH-Pla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~ 88 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIP---AQGVDEKTLADAAQLASLADET-PEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 88 (156)
T ss_dssp --------CEEEEEEEE---CTTSCHHHHHHHHHHTTSSCCS-HHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTE
T ss_pred CCCceecCCCeEEEEEe---cCCCCHHHHHHHHHHHhCcCCC-HHHHHHHHHHHHhcCCCcccccccccceeeccccCCC
Confidence 47999999999998642 3578999999999999988766 9999999877532 11111110 2346789988886
Q ss_pred EEEEEEecCCcEEEEEcCcHHHHHhhccC-CchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEeccc
Q 012767 94 TALTYIDSEGKMHRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPL 172 (456)
Q Consensus 94 ~~v~~~~~~g~~~~~~KGa~e~Il~~~~~-~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l 172 (456)
..+.+ +| ..+.+|+++.|.+++.. ....+..+.+.+++++++|.++++||.+. +++|+|++
T Consensus 89 ~Gv~v---~G--~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~-------------~l~GvIal 150 (156)
T 1svj_A 89 SGINI---DN--RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIAL 150 (156)
T ss_dssp EEEEE---TT--EEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CeEEE---CC--EEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECC-------------EEEEEEEE
Confidence 66633 66 46789998776666532 12334457778899999999999999864 99999999
Q ss_pred CCCCCc
Q 012767 173 FDPPIH 178 (456)
Q Consensus 173 ~d~~r~ 178 (456)
.|++||
T Consensus 151 aD~iK~ 156 (156)
T 1svj_A 151 KDIVKG 156 (156)
T ss_dssp EECCCC
T ss_pred ecCCCC
Confidence 999996
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.1e-13 Score=135.94 Aligned_cols=150 Identities=16% Similarity=0.178 Sum_probs=108.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCC-----ccccCCchhhhhhcCChHHHHhhcccc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-----SALSGQDRDESIVALPVDELIEKADGF 248 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~-----~~l~g~~~~~~~~~~~~~~~~~~~~v~ 248 (456)
-+++|++.++++.|++.|+++.|+||+....+..+.+.+|+..-.... ..+.|.-.. ...+
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~--------------~~~~ 242 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLG--------------EVVS 242 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEES--------------CCCC
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecc--------------cccC
Confidence 378999999999999999999999999999999999999985210000 000000000 0011
Q ss_pred cccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHHHHHHHHH
Q 012767 249 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQR 328 (456)
Q Consensus 249 a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~i~~~ 328 (456)
....|+....+++.++-....|+|+|||.||++|++.||+|++| ++.+..++.||.++..+++.++..++.......++
T Consensus 243 ~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r 321 (335)
T 3n28_A 243 AQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQK 321 (335)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTC
T ss_pred hhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhh
Confidence 12223333444445544457899999999999999999999999 99999999999999999999999999988776777
Q ss_pred HHHHHHHHHH
Q 012767 329 MRNYMVRGID 338 (456)
Q Consensus 329 i~~~~~y~~~ 338 (456)
|++|+.|++.
T Consensus 322 ~~~~~~~~~~ 331 (335)
T 3n28_A 322 LSWKSKEGHH 331 (335)
T ss_dssp CCCC------
T ss_pred hccccccccc
Confidence 7777777654
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.41 E-value=4.3e-13 Score=123.19 Aligned_cols=123 Identities=19% Similarity=0.281 Sum_probs=99.8
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccC--chhHHHHH
Q 012767 183 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF--PEHKYEIV 260 (456)
Q Consensus 183 ~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~--P~~K~~iV 260 (456)
+|+.|++.|+++.++||+....+..+.+.+|+.. +|..+. |+-...++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~------------------------------~~~~~kpk~~~~~~~~ 103 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH------------------------------YYKGQVDKRSAYQHLK 103 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE------------------------------EECSCSSCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc------------------------------ceeCCCChHHHHHHHH
Confidence 3999999999999999999999999999999852 233332 33334455
Q ss_pred HHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCC----chHHHHHHHHHHHHHHHHHHHHHH
Q 012767 261 KHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG----LNVIITAVLISRAIFQRMRNYMVR 335 (456)
Q Consensus 261 ~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~----l~~i~~~i~~~R~i~~~i~~~~~y 335 (456)
+.++-....|+|+||+.||++|++.|+++++++++.+.++..||+++.+++ +..+.+.+...|..|+++.++++|
T Consensus 104 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~ 182 (191)
T 3n1u_A 104 KTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLK 182 (191)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHh
Confidence 555545667999999999999999999999999999999999999999887 445666677777788888877665
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.7e-13 Score=126.44 Aligned_cols=112 Identities=21% Similarity=0.339 Sum_probs=89.5
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHH
Q 012767 183 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 262 (456)
Q Consensus 183 ~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 262 (456)
.|+.|++.|+++.|+||++...+..+++.+|+. .+|... ..|...++.
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~------------------------------~~~~~~--k~k~~~~~~ 107 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGIS------------------------------LIYQGQ--DDKVQAYYD 107 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC------------------------------EEECSC--SSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc------------------------------EEeeCC--CCcHHHHHH
Confidence 499999999999999999999999999999985 234333 456665555
Q ss_pred Hhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchH----HHHHHHHHHHHH
Q 012767 263 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV----IITAVLISRAIF 326 (456)
Q Consensus 263 lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~----i~~~i~~~R~i~ 326 (456)
+.++ ...|+|+||+.||++|++.|+++++|+++.+.+++.||+|+..++-.+ +.+.+..+|..|
T Consensus 108 ~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~~~ 179 (195)
T 3n07_A 108 ICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGAVREVCDLILQARNEL 179 (195)
T ss_dssp HHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHTTSS
T ss_pred HHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhcccH
Confidence 5443 457999999999999999999999999999999999999998877555 344444444333
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.7e-12 Score=117.78 Aligned_cols=129 Identities=20% Similarity=0.176 Sum_probs=103.4
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhH
Q 012767 177 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHK 256 (456)
Q Consensus 177 r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K 256 (456)
.+.+.++|+.|++.|++++++||++...+..+.+.+|+.. +|.. ...|
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~------------------------------~~~~--~k~k 84 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLG--KLEK 84 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEES--CSCH
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce------------------------------eecC--CCCc
Confidence 3567799999999999999999999999999999999852 2222 2456
Q ss_pred HHHHHHHhhc-C---CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHH----HHHHHHHHHHHH
Q 012767 257 YEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII----TAVLISRAIFQR 328 (456)
Q Consensus 257 ~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~----~~i~~~R~i~~~ 328 (456)
...++.+.++ | ..|+|+||+.||++|++.|+++++++++.+.+++.||+++.+++..+++ +.+...|..|++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~ 164 (180)
T 1k1e_A 85 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 164 (180)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhh
Confidence 6666555433 3 6799999999999999999999999999999999999999888766655 444455667888
Q ss_pred HHHHHHHHH
Q 012767 329 MRNYMVRGI 337 (456)
Q Consensus 329 i~~~~~y~~ 337 (456)
++.++.|+.
T Consensus 165 ~~~~~~~~~ 173 (180)
T 1k1e_A 165 FDTAQGFLK 173 (180)
T ss_dssp HHCHHHHHH
T ss_pred hhhccchhh
Confidence 887777764
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.6e-12 Score=115.77 Aligned_cols=136 Identities=19% Similarity=0.158 Sum_probs=100.4
Q ss_pred ccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH--HhCCCCC
Q 012767 140 RGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR--RLGMGTN 217 (456)
Q Consensus 140 ~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~--~lGi~~~ 217 (456)
++.+.+++-..+.--.....+..+-..++.+.+.|. .+|+.|++.|+++.|+||+ ..+..+++ .+|+.
T Consensus 7 ~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-- 76 (168)
T 3ewi_A 7 KEIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-- 76 (168)
T ss_dssp CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC--
T ss_pred hcCcEEEEeCccceECCcEEEcCCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE--
Confidence 456667766655321111122223356777776666 3899999999999999999 67778888 55552
Q ss_pred CCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEec
Q 012767 218 MYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVA 293 (456)
Q Consensus 218 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~ 293 (456)
+|. .+++|...++.+.++ ...|+|+||+.||++|++.|+++++|+
T Consensus 77 -----------------------------~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~ 125 (168)
T 3ewi_A 77 -----------------------------TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA 125 (168)
T ss_dssp -----------------------------EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT
T ss_pred -----------------------------EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC
Confidence 121 235688777776654 356999999999999999999999999
Q ss_pred cccHHHhhcccEEeeCCCchHHH
Q 012767 294 DATDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 294 ~~~~~a~~aaDivl~~~~l~~i~ 316 (456)
++.+.+++.||+|+..++-.+++
T Consensus 126 na~~~~k~~Ad~v~~~~~~~G~~ 148 (168)
T 3ewi_A 126 DACSGAQKAVGYICKCSGGRGAI 148 (168)
T ss_dssp TCCHHHHTTCSEECSSCTTTTHH
T ss_pred ChhHHHHHhCCEEeCCCCCccHH
Confidence 99999999999999988766643
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.29 E-value=7.1e-12 Score=118.14 Aligned_cols=148 Identities=20% Similarity=0.140 Sum_probs=105.8
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCc-cc--cCCch-h-hh---hh--------
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSS-AL--SGQDR-D-ES---IV-------- 234 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~--~~~-~l--~g~~~-~-~~---~~-------- 234 (456)
...+.+.+.++|++|++.|++++++||+....+..+.+.+|+..... +.. +. .|... . .. ..
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999863110 000 00 11111 0 00 00
Q ss_pred ------------------------cCChHHHHhh-------cccccccCc--hhHHHHHHHHhhc----CCEEEEecCCC
Q 012767 235 ------------------------ALPVDELIEK-------ADGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGV 277 (456)
Q Consensus 235 ------------------------~~~~~~~~~~-------~~v~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG~ 277 (456)
.....++.+. ...+.++.| .+|...++.+.+. ...|+++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 0000011110 011224446 6899988888765 24699999999
Q ss_pred CchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 278 NDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 278 ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
||.+|++.|++|++|+++.+..++.||+++.+++-.++..+++
T Consensus 180 nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 9999999999999999999999999999999999999988876
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.28 E-value=1e-11 Score=115.96 Aligned_cols=100 Identities=24% Similarity=0.320 Sum_probs=86.8
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHH
Q 012767 183 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 262 (456)
Q Consensus 183 ~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 262 (456)
+|+.|++.|+++.|+||+....+..+++.+|+. .+|..+ ..|.+.++.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~------------------------------~~f~~~--k~K~~~l~~ 131 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT------------------------------HLYQGQ--SDKLVAYHE 131 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC------------------------------EEECSC--SSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc------------------------------hhhccc--CChHHHHHH
Confidence 899999999999999999999999999999995 234444 567777776
Q ss_pred Hhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchH
Q 012767 263 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV 314 (456)
Q Consensus 263 lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~ 314 (456)
+.++ ...|+|+||+.||++|++.|+++++++++.+.++..||+|+.+++-.+
T Consensus 132 ~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 132 LLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTT
T ss_pred HHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCCc
Confidence 6654 567999999999999999999999999999999999999998876444
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* 4dx0_P* | Back alignment and structure |
|---|
Probab=99.27 E-value=4.5e-13 Score=82.44 Aligned_cols=30 Identities=73% Similarity=1.211 Sum_probs=29.3
Q ss_pred hhhhcccchhhhhhhhcCCCHhhhhhcccC
Q 012767 427 RELHTLKGHVESLIRLKGLDIDAIQQSYSV 456 (456)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (456)
|++|||+||+||++||||+|+++||+||||
T Consensus 2 rElhTLkghvESv~KLKglDi~~i~~~yTV 31 (31)
T 3m50_P 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31 (31)
T ss_dssp HHHHCHHHHHHHHHHHTTCCSCCCCCCCCC
T ss_pred chhhHHHHHHHHHHHHhcCChhhhhhcccC
Confidence 789999999999999999999999999998
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.27 E-value=2e-11 Score=110.36 Aligned_cols=105 Identities=27% Similarity=0.333 Sum_probs=88.3
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHH
Q 012767 183 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 262 (456)
Q Consensus 183 ~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 262 (456)
+|+.|++.|+++.++||+....+..+++.+|+. +|... ..|...++.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-------------------------------~~~~~--~~k~~~l~~ 93 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-------------------------------VLHGI--DRKDLALKQ 93 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------------------------------EEESC--SCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------------------------------eEeCC--CChHHHHHH
Confidence 899999999999999999999999999999984 12222 556766666
Q ss_pred Hhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 263 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 263 lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
+.++ ...++|+||+.||++|++.|+++++++++.+..++.||+++.+++..+++..+.
T Consensus 94 ~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~ 155 (176)
T 3mmz_A 94 WCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREIA 155 (176)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHHH
Confidence 6554 367999999999999999999999999999999999999999888666554443
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.2e-12 Score=93.71 Aligned_cols=51 Identities=71% Similarity=1.076 Sum_probs=49.0
Q ss_pred cccccchhHHHHHhhhhHHhhhhhhcccchhhhhhhhcCCCHhhhhhcccC
Q 012767 406 SYGELSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 456 (456)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (456)
+|..++++++++++|+|++|||++|+|++++|+++|++|+|++.++++|||
T Consensus 2 s~~~~s~~ae~a~~raeiarL~~~~sl~~~~es~~kl~g~dl~~~~~~~tv 52 (52)
T 2o98_P 2 NFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52 (52)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCCCCCCCCCCCC
T ss_pred chhHHHHHHHHhcCcceeeccccchhHHHHHHhhHhhhhhhHhhcccccCC
Confidence 467889999999999999999999999999999999999999999999997
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=6.1e-11 Score=105.20 Aligned_cols=106 Identities=26% Similarity=0.285 Sum_probs=86.5
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHH
Q 012767 183 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 262 (456)
Q Consensus 183 ~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 262 (456)
+++.|++.|+++.++||+....+..+.+.+|+.. +|... ..|...++.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~------------------------------~~~~~--kpk~~~~~~ 86 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY------------------------------LFQGV--VDKLSAAEE 86 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE------------------------------EECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE------------------------------eeccc--CChHHHHHH
Confidence 8999999999999999999999999999999852 23333 334555544
Q ss_pred Hhh----cCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchH-HHHHHH
Q 012767 263 LQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV-IITAVL 320 (456)
Q Consensus 263 lq~----~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~-i~~~i~ 320 (456)
+.+ ....|+|+||+.||++|++.|+++++++++.+..++.||+++.+++..+ +.++++
T Consensus 87 ~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~~ 149 (164)
T 3e8m_A 87 LCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFVE 149 (164)
T ss_dssp HHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHHH
Confidence 433 3457999999999999999999999999999999999999999988666 444443
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.14 E-value=8.6e-11 Score=107.93 Aligned_cols=133 Identities=20% Similarity=0.203 Sum_probs=96.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccc-ccC
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA-GVF 252 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a-~~~ 252 (456)
-++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... . ..+...+. ... ..+.. ...
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f-~-~~~~~~~~--~~~----------~~~~~~~~~ 139 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAF-S-NTLIVEND--ALN----------GLVTGHMMF 139 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEE-E-EEEEEETT--EEE----------EEEEESCCS
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhc-c-ceeEEeCC--EEE----------eeeccCCCC
Confidence 357899999999999999999999999999999999999985311 0 00000000 000 00000 112
Q ss_pred chhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 253 PEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 253 P~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
...|..+++.+.++ ...|+|+||+.||++|++.|++++++ ++.+..++.||+|+.+++|..+..++.+
T Consensus 140 ~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 140 SHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp TTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred CCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 35566666555443 45699999999999999999999999 8889999999999999999998887764
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.1e-10 Score=119.63 Aligned_cols=136 Identities=21% Similarity=0.264 Sum_probs=106.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCC-----ccccCCchhhhhhcCChHHHHhhccccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-----SALSGQDRDESIVALPVDELIEKADGFA 249 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~-----~~l~g~~~~~~~~~~~~~~~~~~~~v~a 249 (456)
++.|++.++++.|++.|+++.++||.....+..+.+.+|+....... ..+.|... -.
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~------------------~~ 317 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVV------------------GP 317 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEEC------------------SS
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEc------------------cC
Confidence 78999999999999999999999999999999999999985211000 00000000 00
Q ss_pred ccCchhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHHHHHH
Q 012767 250 GVFPEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAI 325 (456)
Q Consensus 250 ~~~P~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~i 325 (456)
-..++.|.++++.+.++ ...|+|+||+.||.+|++.||+|+++ ++.+..++.||+++..+++.+++.++..+|.-
T Consensus 318 v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 318 IIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 11245677776666544 35699999999999999999999999 88899999999999999999999999988876
Q ss_pred HHHH
Q 012767 326 FQRM 329 (456)
Q Consensus 326 ~~~i 329 (456)
+...
T Consensus 397 ~~~~ 400 (415)
T 3p96_A 397 IEAA 400 (415)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6554
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.08 E-value=3.9e-10 Score=108.49 Aligned_cols=72 Identities=24% Similarity=0.313 Sum_probs=61.9
Q ss_pred ccCch--hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 250 GVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 250 ~~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
++.|. .|...++.+.++ ...|+++||+.||.+|++.|++|+||+++.+.++++||+|+.+++-.+|..+|+.
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 34454 688887777654 3459999999999999999999999999999999999999999999999988873
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.04 E-value=1.2e-09 Score=105.73 Aligned_cols=67 Identities=18% Similarity=0.182 Sum_probs=59.8
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
..|...++.+.+. ...|+++||+.||.+|++.|++|+||+++.+.+++.||+|+.+++-++|..+|+
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~ 271 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMK 271 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHH
Confidence 4588888777655 245999999999999999999999999999999999999999999999998887
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=6.8e-10 Score=100.95 Aligned_cols=128 Identities=22% Similarity=0.305 Sum_probs=89.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccc-ccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA-GVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a-~~~P 253 (456)
++.|++.++++.|++.|+++.++||+....+..+.+.+|+... +.......+. ... ..... .+.+
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~----------~~~~~~~~~~ 141 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA-FANRLIVKDG---KLT----------GDVEGEVLKE 141 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE-EEEEEEEETT---EEE----------EEEECSSCST
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE-EEeeeEEECC---EEc----------CCcccCccCC
Confidence 4568999999999999999999999998888888888887421 1000000000 000 00000 1224
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHH
Q 012767 254 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIIT 317 (456)
Q Consensus 254 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~ 317 (456)
..|...+..+.++ ...|+++||+.||++|++.|+++++|+ +.+..+..||+++.++++..+..
T Consensus 142 ~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 142 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred ccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 5677666655443 345999999999999999999999998 66777889999998777877654
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.01 E-value=9e-10 Score=109.45 Aligned_cols=143 Identities=12% Similarity=0.155 Sum_probs=97.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCc---h-----------hhhhhcCChHH
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD---R-----------DESIVALPVDE 240 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~---~-----------~~~~~~~~~~~ 240 (456)
++++++.++++.|++ |+.+.++||+....+..+...+++..... ...+.... . ++.......++
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELH-GTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEE-EEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhc-ccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 468999999999999 99999999998777777777777632111 00000000 0 00000000000
Q ss_pred H--Hhh----c--ccccc--cC--chhHHHHHHHHhhcC--CEEEEecCCCCchhhhhhc----CeeEEeccccHHHhhc
Q 012767 241 L--IEK----A--DGFAG--VF--PEHKYEIVKHLQARN--HICGMIGNGVNDAPALKKA----DIGIAVADATDAARSA 302 (456)
Q Consensus 241 ~--~~~----~--~v~a~--~~--P~~K~~iV~~lq~~g--~~v~~iGDG~ND~~aLk~A----dvGIa~~~~~~~a~~a 302 (456)
+ +.. . ..+.+ .. +.+|...++.+.... +.|+++|||.||++|++.| ++|||| ++.+.+++.
T Consensus 181 l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~~ 259 (332)
T 1y8a_A 181 FRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALKH 259 (332)
T ss_dssp HHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHTT
T ss_pred HHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHhh
Confidence 0 000 0 11211 22 457888888766543 5599999999999999999 999999 999999999
Q ss_pred ccEEeeCCCchHHHHHHH
Q 012767 303 ADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 303 aDivl~~~~l~~i~~~i~ 320 (456)
||+|+.+++..++..+|.
T Consensus 260 Ad~v~~~~~~dGV~~~l~ 277 (332)
T 1y8a_A 260 ADVVIISPTAMSEAKVIE 277 (332)
T ss_dssp CSEEEECSSTHHHHHHHH
T ss_pred CcEEecCCCCCHHHHHHH
Confidence 999999999998887765
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.8e-09 Score=104.59 Aligned_cols=67 Identities=22% Similarity=0.245 Sum_probs=59.8
Q ss_pred hhHHHHHHHHhhc-C---CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
..|...++.+.+. | ..|+++||+.||.+|++.|++||||+|+.+.++++||+|+.+++-++|..+|+
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 3588888887665 2 45999999999999999999999999999999999999999999999998886
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.7e-09 Score=98.48 Aligned_cols=107 Identities=24% Similarity=0.315 Sum_probs=86.3
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHH
Q 012767 182 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 261 (456)
Q Consensus 182 ~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~ 261 (456)
.+|+.|++.|+++.++||+....+..+.+.+|+.. +|... ..|..+++
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~------------------------------~~~~~--kpk~~~~~ 107 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH------------------------------LYQGQ--SNKLIAFS 107 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECSC--SCSHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce------------------------------eecCC--CCCHHHHH
Confidence 48999999999999999999999999999999852 23222 33455555
Q ss_pred HHhhc-C---CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHH-HHHH
Q 012767 262 HLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII-TAVL 320 (456)
Q Consensus 262 ~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~-~~i~ 320 (456)
.+.++ | ..|+|+||+.||++|++.|+++++++++.+..+..||+++.+++..+++ +++.
T Consensus 108 ~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 108 DLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 55433 3 5799999999999999999999999988888888999999988766666 5554
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.99 E-value=9.2e-10 Score=109.02 Aligned_cols=131 Identities=15% Similarity=0.156 Sum_probs=95.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccc-ccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA-GVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a-~~~P 253 (456)
++.|++.++++.|++.|+++.++||.....+..+.+.+|+...........+..... .+.. ...+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg--------------~i~~~~~~~ 244 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTD--------------NITLPIMNA 244 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEE--------------EECSSCCCH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeee--------------eEecccCCC
Confidence 588999999999999999999999999999999999999853110000000000000 0000 1123
Q ss_pred hhHHHHHHHHhh----cCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~----~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
..|.++++.+.+ ....++|+||+.||++|++.||+|+++ ++.+..++.+|.++..+++..+..++.
T Consensus 245 kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 245 ANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 456555554433 345799999999999999999999999 678888999999999899998877653
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.97 E-value=6.5e-10 Score=106.91 Aligned_cols=66 Identities=24% Similarity=0.274 Sum_probs=48.5
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.|...++.+.+. ...|+++||+.||.+|++.|++|+||+++.+..+++||+|+.+++-.+|..+|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHH
Confidence 488888877665 245999999999999999999999999999999999999999889999988876
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.97 E-value=2.7e-09 Score=94.28 Aligned_cols=109 Identities=22% Similarity=0.278 Sum_probs=87.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchh
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 255 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 255 (456)
+.+++.++|+.|++.|+++.++||.....+..+.+.+|+.. +|... ..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~------------------------------~~~~~--kp 84 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE------------------------------IYTGS--YK 84 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE------------------------------EEECC----
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh------------------------------hccCC--CC
Confidence 34678899999999999999999999999999999999852 12222 22
Q ss_pred HHH----HHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHH
Q 012767 256 KYE----IVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 256 K~~----iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~ 316 (456)
|.. +++.+.-....++|+||+.||.+|.+.|++++++.++.+..+..||+++.+.+..+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 85 KLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHH
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHH
Confidence 333 3344443456799999999999999999999999888888888999999988877776
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=3.1e-09 Score=96.90 Aligned_cols=136 Identities=14% Similarity=0.169 Sum_probs=88.2
Q ss_pred cccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCc-hhh-hhcceEEEeecCCCCCceEEE
Q 012767 19 GTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADP-KEA-RADIQEVHFLPFDPTGKRTAL 96 (456)
Q Consensus 19 GTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~-~~~-~~~~~~~~~~pf~~~~k~~~v 96 (456)
||||+|+|.|..+..-....+.+.++++.+++.++..++| |+++||+.++... ... ....+.++..|.. ...+
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~laaa~E~~SeH-PlA~AIv~~a~~~~~~~~~~~~~~f~~i~G~---Gv~~- 75 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSEH-PLGTAITKYCKQELDTETLGTCIDFQVVPGC---GISC- 75 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSCHHHHHHHHHHGGGSSSC-HHHHHHHHHHHHHHTCSCCCCCBCCEEETTT---EEEE-
T ss_pred CCCcCCcEEEEEEEecCCcCCCCHHHHHHHHHHHHccCCC-HHHHHHHHHHHhhcCCCCCCCccceEEeccc---eEEE-
Confidence 8999999999885421111346788999999999999887 9999999887421 100 0111222223321 1111
Q ss_pred EEEecC-----------------------------------------------CcEEEEEcCcHHHHHhhccCCchhhhH
Q 012767 97 TYIDSE-----------------------------------------------GKMHRVTKGSPEQILNLLHNKSKIGRK 129 (456)
Q Consensus 97 ~~~~~~-----------------------------------------------g~~~~~~KGa~e~Il~~~~~~~~~~~~ 129 (456)
.+.+.+ .+.+.+..|+++++.+.. -.+.+.
T Consensus 76 ~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~g---i~i~~~ 152 (185)
T 2kmv_A 76 KVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNG---LVINND 152 (185)
T ss_dssp EECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHT---CCCCHH
T ss_pred EECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcC---CCCCHH
Confidence 111100 011567889999986532 123344
Q ss_pred HHHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCC
Q 012767 130 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDP 175 (456)
Q Consensus 130 ~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~ 175 (456)
+...+.++..+|.+++.||.++ +++|++++.|+
T Consensus 153 ~~~~~~~~~~~G~T~V~vaidg-------------~l~g~iavaD~ 185 (185)
T 2kmv_A 153 VNDFMTEHERKGRTAVLVAVDD-------------ELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred HHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEEEcC
Confidence 5566778889999999999876 89999999985
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.94 E-value=2.6e-09 Score=101.69 Aligned_cols=66 Identities=21% Similarity=0.274 Sum_probs=57.8
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.|...++.+.+. ...|+++||+.||.+|++.|++|+||+|+.+.+++.||+|+.+++-.++..+|+
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 466667666553 346999999999999999999999999999999999999999999999998886
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.93 E-value=1.1e-09 Score=98.74 Aligned_cols=119 Identities=20% Similarity=0.267 Sum_probs=89.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
+++|++.++++.|++.|+++.++|++....+..+ +.+|+..- ........... . -....|.
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~----------------~-~~~~~~~ 139 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFEDGKF----------------Q-GIRLRFR 139 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEETTEE----------------E-EEECCSS
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeCCce----------------E-CCcCCcc
Confidence 6899999999999999999999999988887777 77776421 00000000000 0 0244567
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.|...++.+ ....|+|+||+.||++|++.|+++++|+++.+ .||+++. ++..+..++.
T Consensus 140 ~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 140 DKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp CHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEES--SHHHHHHHHH
T ss_pred CHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEEc--cHHHHHHHHH
Confidence 899998888 56679999999999999999999999998776 8899884 4666666654
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.92 E-value=3.2e-09 Score=102.81 Aligned_cols=67 Identities=19% Similarity=0.214 Sum_probs=58.1
Q ss_pred hhHHHHHHHHhhc-C---CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccE--EeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI--VLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDi--vl~~~~l~~i~~~i~ 320 (456)
..|...++.+.+. | ..|+++||+.||.+|++.|++|+||+|+.+.++++||. |+.+++-++|..+|+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 4588888877665 2 45999999999999999999999999999999999984 677888899988876
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.85 E-value=1e-08 Score=96.28 Aligned_cols=147 Identities=21% Similarity=0.177 Sum_probs=101.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCc-ccc-CCc--------hhh-------hhh
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSS-ALS-GQD--------RDE-------SIV 234 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~--~~~-~l~-g~~--------~~~-------~~~ 234 (456)
..+.+.+.++++++++.|++++++||.....+..+.+.+|+..... +.. +.. +.. ..+ ...
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 3467889999999999999999999999999999999999753111 000 000 100 000 000
Q ss_pred cC--------------------C---hHHHHhhc----cc-----ccccCc--hhHHHHHHHHhhc----CCEEEEecCC
Q 012767 235 AL--------------------P---VDELIEKA----DG-----FAGVFP--EHKYEIVKHLQAR----NHICGMIGNG 276 (456)
Q Consensus 235 ~~--------------------~---~~~~~~~~----~v-----~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG 276 (456)
.. . ..++.+.. .+ +.++.| ..|...++.+.++ ...|+++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 00 1 11111111 11 123334 3688887777654 3469999999
Q ss_pred CCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 277 VNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 277 ~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.||.+|++.|+++++|+++.+..++.||+++.+++-.++..+++
T Consensus 179 ~nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 99999999999999999999989999999998888888888776
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.84 E-value=3.6e-08 Score=94.05 Aligned_cols=195 Identities=15% Similarity=0.149 Sum_probs=115.7
Q ss_pred hhhhHHHHHHHHHHHccCeeeEEeeeecCCCC-cCCCCCCceEeE---e--------cccCCC-CCcchHHHHHHHHhCC
Q 012767 125 KIGRKVNAVINKFAERGLRSLAVAYQEVPEGS-KESSGSPWQFIG---L--------IPLFDP-PIHDSAETIRRALSLG 191 (456)
Q Consensus 125 ~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~-~~~~e~~~~~lG---~--------i~l~d~-~r~~~~~~I~~l~~~G 191 (456)
.+.+...+.+.++.++|.++....-+...... ....+-+ .+++ . +....+ +++.+.+.++.+++.+
T Consensus 30 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~l~~~-~~i~~nGa~i~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 108 (268)
T 3r4c_A 30 KVSQSSIDALKKVHDSGIKIVIATGRAASDLHEIDAVPYD-GVIALNGAECVLRDGSVIRKVAIPAQDFRKSMELAREFD 108 (268)
T ss_dssp SCCHHHHHHHHHHHHTTCEEEEECSSCTTCCGGGTTSCCC-EEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHhHHHHhcCCC-cEEEeCCcEEEEcCCeEEEEecCCHHHHHHHHHHHHHcC
Confidence 45667778899999999987765544322211 0111100 0111 0 011223 3456788899999999
Q ss_pred CeEEEEcCCcH------HHHHHHHHHhCCCCCCCCCcc--ccCCchhhhhhcC---ChHHHHhhc---------cccccc
Q 012767 192 LGVKMITGDQL------AIAKETGRRLGMGTNMYPSSA--LSGQDRDESIVAL---PVDELIEKA---------DGFAGV 251 (456)
Q Consensus 192 i~v~miTGD~~------~~a~~ia~~lGi~~~~~~~~~--l~g~~~~~~~~~~---~~~~~~~~~---------~v~a~~ 251 (456)
+.+.+.+.+.. .......+..+.......... +............ ...++.... ..+.++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei 188 (268)
T 3r4c_A 109 FAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCFYFDEEAEQKVMPLLSGLSATRWHPLFADV 188 (268)
T ss_dssp CEEEEEETTEEEESCCCHHHHHHHHHHTCCCCCBCCHHHHHHHSCCCCEEEECCHHHHHHHGGGCTTEEEEEEETTEEEE
T ss_pred cEEEEEECCEEEEeCCcHHHHHHHHHcCCCCCcccchHHHhccCceEEEEEecChHHHHHHHHhCCCcEEEEecCCeEEE
Confidence 99888887653 223334455554321110000 0000000000000 001111111 122334
Q ss_pred Cc--hhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 252 FP--EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 252 ~P--~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.| ..|...++.+.++ ...|+++||+.||.+|++.|++|+||+|+.+.++++||+|+.+++-++|..+|+
T Consensus 189 ~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 263 (268)
T 3r4c_A 189 NVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALK 263 (268)
T ss_dssp EETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHH
T ss_pred eeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHH
Confidence 44 4688888777665 345999999999999999999999999999999999999999999999998886
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.84 E-value=3.4e-09 Score=101.24 Aligned_cols=68 Identities=24% Similarity=0.249 Sum_probs=59.4
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 254 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 254 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
..|...++.+.++ ...|+++||+.||.+|++.|++|+||+++.+..+++||+|+.+++-++|..+|+.
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 3487777766554 4569999999999999999999999999999999999999999999999988863
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.84 E-value=3.5e-09 Score=103.64 Aligned_cols=67 Identities=24% Similarity=0.234 Sum_probs=59.8
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
..|...++.+.++ ...|+++||+.||.+|++.|++||||+|+.+.++++||+|+.+++-++|..+|+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4688888877655 245999999999999999999999999999999999999999888999998887
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-08 Score=93.36 Aligned_cols=128 Identities=13% Similarity=0.111 Sum_probs=92.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+........++.++. ....-.|+
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~------------------~~~kp~~~ 131 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE------------------APPKPHPG 131 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT------------------SCCTTSSH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC------------------CCCCCCHH
Confidence 356899999999999999999999999999999999999852110011111100 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe-eEEeccccHHHhhcccEEeeCCCchHHHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADATDAARSAADIVLTEPGLNVIITAVLIS 322 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~~ 322 (456)
--..+++.+.-....|+|+||+.||+.|.+.|++ +|+|+++.+..++.||+++ +++..+...+...
T Consensus 132 ~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~ 198 (205)
T 3m9l_A 132 GLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAE 198 (205)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhc
Confidence 2234445554445679999999999999999999 9999988877888899998 5588888777643
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.79 E-value=3.9e-08 Score=89.64 Aligned_cols=128 Identities=14% Similarity=0.113 Sum_probs=92.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++. +++.++|+.....+..+.+.+|+... +...+..+.+... ...-.-.|+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~-f~~~~~~~~~~~~--------------~~~~~p~p~ 132 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTL-LCHKLEIDDSDRV--------------VGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCE-EEEEEEECTTSCE--------------EEEECCSSS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcce-ecceeEEcCCceE--------------EeeecCCCc
Confidence 5789999999999999 99999999999999999999998631 1011111110000 000024678
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhh-cccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARS-AADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~-aaDivl~~~~l~~i~~~i~ 320 (456)
.|...++.+......|+|+||+.||++|.+.|++++++.. .+..+. +.+++ .-+++..+..++.
T Consensus 133 ~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~-~~~~~~~~~~~~-~~~~~~~l~~~l~ 197 (206)
T 1rku_A 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHA-PENVIREFPQFP-AVHTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESC-CHHHHHHCTTSC-EECSHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECC-cHHHHHHHhhhc-cccchHHHHHHHH
Confidence 8999999998888899999999999999999999999854 444444 44543 2367888877664
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.77 E-value=3e-08 Score=90.17 Aligned_cols=129 Identities=9% Similarity=0.056 Sum_probs=89.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCC-CCCCcccc-CCchhhhhhcCChHHHHhhcccccccCc
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTN-MYPSSALS-GQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~-~~~~~~l~-g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
+.|++.++++.|++.|+++.++|+.....+..+.+.+|+... .+...... ...... ........|
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~ 149 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFK-------------ELDNSNGAC 149 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEE-------------EEECTTSTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCcee-------------ccCCCCCCc
Confidence 789999999999999999999999999999999999998531 11111110 000000 001234456
Q ss_pred hhHHHHHHHH-hhcCCEEEEecCCCCchhhhhh----cCeeEEeccccHHHhhcccEEeeCCCchHHHHHH
Q 012767 254 EHKYEIVKHL-QARNHICGMIGNGVNDAPALKK----ADIGIAVADATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 254 ~~K~~iV~~l-q~~g~~v~~iGDG~ND~~aLk~----AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
..|...+..+ .-....++|+||+.||++|++. +.++++++++.+..+..||+++ +++..+..++
T Consensus 150 ~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~--~~~~el~~~l 218 (219)
T 3kd3_A 150 DSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVA--RNVAELASLI 218 (219)
T ss_dssp TCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEE--SSHHHHHHHH
T ss_pred ccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceee--CCHHHHHHhh
Confidence 6677666554 5567889999999999999975 3444444567778888999998 4576666543
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.74 E-value=2.6e-08 Score=92.42 Aligned_cols=127 Identities=21% Similarity=0.271 Sum_probs=91.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++.. ....-.|+
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 164 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL--TVIAGDDSV-----------------ERGKPHPD 164 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC--SEEECTTTS-----------------SSCTTSSH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe--eeEEeCCCC-----------------CCCCCCHH
Confidence 46789999999999999999999999999999999999875211 111111100 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe---eEEecccc-HHHhh-cccEEeeCCCchHHHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI---GIAVADAT-DAARS-AADIVLTEPGLNVIITAVLIS 322 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv---GIa~~~~~-~~a~~-aaDivl~~~~l~~i~~~i~~~ 322 (456)
--..+++.+.-....|+|+||+.||+.|++.||+ +|+++++. +..+. .+|+++ +++..+..++..+
T Consensus 165 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~ 235 (237)
T 4ex6_A 165 MALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDG 235 (237)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHcc
Confidence 3345556665556679999999999999999999 88887443 44444 799998 5688888887654
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.72 E-value=8e-08 Score=92.94 Aligned_cols=66 Identities=24% Similarity=0.225 Sum_probs=58.7
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++..++..+|+
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 688888877654 346999999999999999999999999999999999999999888899988876
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.62 E-value=5.2e-08 Score=90.10 Aligned_cols=126 Identities=19% Similarity=0.245 Sum_probs=86.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC-CCCCCcc-------ccCCchhhhhhcCChHHHHhhcc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSA-------LSGQDRDESIVALPVDELIEKAD 246 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~-~~~~~~~-------l~g~~~~~~~~~~~~~~~~~~~~ 246 (456)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.. +.+...+ +.+.+.
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~----------------- 148 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDE----------------- 148 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECT-----------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCC-----------------
Confidence 578999999999999999999999999999999999999863 1111100 001000
Q ss_pred cccccCchhHHHHHHHHhhc-C-CEEEEecCCCCchhhhhhcCeeEEeccc--cHHHhhcccEEeeCCCchHHHHHH
Q 012767 247 GFAGVFPEHKYEIVKHLQAR-N-HICGMIGNGVNDAPALKKADIGIAVADA--TDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 247 v~a~~~P~~K~~iV~~lq~~-g-~~v~~iGDG~ND~~aLk~AdvGIa~~~~--~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
....+.+..|.++++.+.++ | ..++|+||+.||+.|.+.||++|+++.. .+.....+|+++. ++..+..++
T Consensus 149 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (225)
T 1nnl_A 149 TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVELLGEL 223 (225)
T ss_dssp TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGGCC--
T ss_pred CCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHHHHHHH
Confidence 00111234566666655443 3 5799999999999999999998888743 2344556898884 466555443
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.61 E-value=7.3e-08 Score=88.56 Aligned_cols=128 Identities=10% Similarity=0.119 Sum_probs=88.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
-++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++.. ....-.|
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~ 145 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF--DAIVGSSLD-----------------GKLSTKE 145 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTT-----------------SSSCSHH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe--eeeeccCCC-----------------CCCCCCH
Confidence 357899999999999999999999999999999999999875211 111111000 0000111
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe---eEEeccccHHH--hhcccEEeeCCCchHHHHHHHHH
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI---GIAVADATDAA--RSAADIVLTEPGLNVIITAVLIS 322 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv---GIa~~~~~~~a--~~aaDivl~~~~l~~i~~~i~~~ 322 (456)
+--..+.+.+.-....|+++||+.||+.|++.||+ +++++++.... +..+|+++ +++..+..++...
T Consensus 146 ~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~s~~el~~~~~~~ 217 (226)
T 3mc1_A 146 DVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIV--NSVDELHKKILEL 217 (226)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEE--SSHHHHHHHHHTC
T ss_pred HHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEE--CCHHHHHHHHHHH
Confidence 22223444444445679999999999999999999 77777554433 57899998 4588888777643
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.61 E-value=1.8e-07 Score=86.73 Aligned_cols=107 Identities=17% Similarity=0.159 Sum_probs=75.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccc-cccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~-a~~~P 253 (456)
.+.|++.++++.|++.|+++.++||.....+..+.+.+|+.. .+.......+. .... .+. ..+.+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~---~~~g----------~~~~~~~~~ 157 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH-LIATDPEYRDG---RYTG----------RIEGTPSFR 157 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE-EEECEEEEETT---EEEE----------EEESSCSST
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-EEEcceEEECC---EEee----------eecCCCCcc
Confidence 479999999999999999999999999999999999999852 11110000000 0000 000 12234
Q ss_pred hhHHHHHHHHhh-cC------CEEEEecCCCCchhhhhhcCeeEEeccc
Q 012767 254 EHKYEIVKHLQA-RN------HICGMIGNGVNDAPALKKADIGIAVADA 295 (456)
Q Consensus 254 ~~K~~iV~~lq~-~g------~~v~~iGDG~ND~~aLk~AdvGIa~~~~ 295 (456)
..|...++.+.+ .| ..|+++||+.||++|++.|++++++...
T Consensus 158 ~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~ 206 (232)
T 3fvv_A 158 EGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPS 206 (232)
T ss_dssp HHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCC
T ss_pred hHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcC
Confidence 667766655443 23 5799999999999999999999999643
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.59 E-value=8.7e-08 Score=87.47 Aligned_cols=122 Identities=4% Similarity=-0.043 Sum_probs=82.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.+.++.+++.|+++.++|++ ..+..+.+.+|+.... ..++.+++. ....-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 149 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYF--DAIADPAEV-----------------AASKPAPD 149 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGC--SEECCTTTS-----------------SSCTTSSH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHc--ceEeccccC-----------------CCCCCChH
Confidence 35789999999999999999999998 3455666777764210 111111100 00111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 318 (456)
--..+.+.+.-....|+++||+.||++|++.|+++++|.++.+..+ .||+++.+.+-..+..+
T Consensus 150 ~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~~el~~~~~ 212 (221)
T 2wf7_A 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDTSHYTLEFL 212 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSGGGCCHHHH
T ss_pred HHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCHHhCCHHHH
Confidence 3334555555455679999999999999999999999998877777 89999866544444433
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.9e-07 Score=86.24 Aligned_cols=123 Identities=11% Similarity=0.070 Sum_probs=78.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchh
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 255 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 255 (456)
+.|++.++++.|++.|+++.++|+... +..+.+.+|+.... ..++.+++. ....-.|+-
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~~~ 151 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF--HAIVDPTTL-----------------AKGKPDPDI 151 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC--SEECCC--------------------------CCH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc--CEEeeHhhC-----------------CCCCCChHH
Confidence 688999999999999999999999754 67777888875321 111111110 001112222
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 256 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 256 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
-..+++.+.-....|+|+||+.||+.|.+.||+++++.++.+..+ .||+++.+..--.+..+++
T Consensus 152 ~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s~~el~~~~~~~ 215 (233)
T 3nas_A 152 FLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQTSDLTLELLHE 215 (233)
T ss_dssp HHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECSSGGGCCHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCChHhCCHHHHHH
Confidence 245566666556779999999999999999999999997766666 8999986544334444443
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.57 E-value=1.7e-07 Score=85.56 Aligned_cols=121 Identities=17% Similarity=0.211 Sum_probs=83.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.+.++.+++.|+++.++|+........+.+.+|+.... ..++.+... ....-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~-----------------~~~kp~~~ 154 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKL-----------------PYSKPHPQ 154 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTS-----------------SCCTTSTH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhC--cEEEecccc-----------------CCCCCChH
Confidence 45789999999999999999999999988888888888874211 111111000 00011122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe----ccccHHHhhcccEEeeCCCchHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADATDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~----~~~~~~a~~aaDivl~~~~l~~i~ 316 (456)
--..+.+.+.-....|+++||+.||++|++.|++++++ .++.+..+..||+++.+ +..+.
T Consensus 155 ~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~--~~el~ 218 (226)
T 1te2_A 155 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS--LTELT 218 (226)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC--GGGCC
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECC--HHHHh
Confidence 23344555554556799999999999999999999998 55555667889998843 54443
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.55 E-value=2.1e-07 Score=88.06 Aligned_cols=127 Identities=14% Similarity=0.184 Sum_probs=85.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.+.++.|++.|+++.++|++.......+.+.+|+.... ...++.++.. ....-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~-----------------~~~kp~~~ 164 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDV-----------------PAGRPYPW 164 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGS-----------------SCCTTSSH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccC-hHheecCCcc-----------------CCCCCCHH
Confidence 46789999999999999999999999988888888887764221 1111111100 00111233
Q ss_pred hHHHHHHHHhhcC-CEEEEecCCCCchhhhhhcC---eeEEeccc------------------------cHHHhhc-ccE
Q 012767 255 HKYEIVKHLQARN-HICGMIGNGVNDAPALKKAD---IGIAVADA------------------------TDAARSA-ADI 305 (456)
Q Consensus 255 ~K~~iV~~lq~~g-~~v~~iGDG~ND~~aLk~Ad---vGIa~~~~------------------------~~~a~~a-aDi 305 (456)
--..+++.+.-.. ..|+|+||+.||+.|++.|+ ++++++++ .+..+.. ||+
T Consensus 165 ~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 244 (267)
T 1swv_A 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 244 (267)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCce
Confidence 3344555555555 67999999999999999999 56666654 2333444 899
Q ss_pred EeeCCCchHHHHHHHH
Q 012767 306 VLTEPGLNVIITAVLI 321 (456)
Q Consensus 306 vl~~~~l~~i~~~i~~ 321 (456)
++ +++..+..++..
T Consensus 245 v~--~~~~el~~~l~~ 258 (267)
T 1swv_A 245 TI--ETMQELESVMEH 258 (267)
T ss_dssp EE--SSGGGHHHHHHH
T ss_pred ec--cCHHHHHHHHHH
Confidence 88 558888777653
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=2.3e-07 Score=88.38 Aligned_cols=64 Identities=22% Similarity=0.293 Sum_probs=55.0
Q ss_pred hhHHHHHHHHhhc-C-----CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQAR-N-----HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~~-g-----~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
..|...++.+.++ | ..|+++||+.||.+|++.|++|++|+|+.+ . +++++..+++-.++.+++.
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5788888887665 3 679999999999999999999999999888 4 7789988888888887776
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.50 E-value=2e-07 Score=85.78 Aligned_cols=126 Identities=15% Similarity=0.116 Sum_probs=85.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++.. ....-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 151 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK--INIVTRDDV-----------------SYGKPDPD 151 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS--SCEECGGGS-----------------SCCTTSTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh--heeeccccC-----------------CCCCCChH
Confidence 45789999999999999999999999999899999988886321 111111100 01111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe---eEEec-cccHHHhhc-ccEEeeCCCchHHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI---GIAVA-DATDAARSA-ADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv---GIa~~-~~~~~a~~a-aDivl~~~~l~~i~~~i~~ 321 (456)
--..+.+.+.-....|+|+||+.||+.|++.||+ +++++ +..+..+.. +|+++ +++..+..++..
T Consensus 152 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~ 221 (233)
T 3s6j_A 152 LFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDE 221 (233)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGG
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHH
Confidence 2233444444445679999999999999999999 44444 344444554 89988 558888777653
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.3e-07 Score=91.52 Aligned_cols=131 Identities=15% Similarity=0.171 Sum_probs=90.9
Q ss_pred CCCcchHHHHHHHHhC-CCeEEEEcCC---------------------cHHHHHHHHHHhCCCCCCCCCccccCCchhhh
Q 012767 175 PPIHDSAETIRRALSL-GLGVKMITGD---------------------QLAIAKETGRRLGMGTNMYPSSALSGQDRDES 232 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~-Gi~v~miTGD---------------------~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~ 232 (456)
.+++++.++++.+++. |+++.+.|.. ....+..+.+..|+...........+..
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~---- 197 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDP---- 197 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCC----
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCC----
Confidence 4678999999999887 9998888876 3344455555555531100000000000
Q ss_pred hhcCChHHHHhhcccccccCc--hhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEE
Q 012767 233 IVALPVDELIEKADGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 306 (456)
Q Consensus 233 ~~~~~~~~~~~~~~v~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDiv 306 (456)
....+..+.| ..|...++.+.++ ...|+|+||+.||.+|++.|++|++|+++.+..+..||++
T Consensus 198 -----------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v 266 (289)
T 3gyg_A 198 -----------EDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLI 266 (289)
T ss_dssp -----------TTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCB
T ss_pred -----------CCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEE
Confidence 0012333444 4577777666544 3469999999999999999999999999999999999999
Q ss_pred eeCCCchHHHHHHH
Q 012767 307 LTEPGLNVIITAVL 320 (456)
Q Consensus 307 l~~~~l~~i~~~i~ 320 (456)
+.+++-.++..+|.
T Consensus 267 ~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 267 TDSEYSKGITNTLK 280 (289)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHH
Confidence 99888888888876
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.47 E-value=2.2e-07 Score=84.73 Aligned_cols=124 Identities=15% Similarity=0.107 Sum_probs=79.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchh
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 255 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 255 (456)
+.|++.+.++.+++.|+++.++|+..........+.+|+.... ..++.++.. ....-.|.-
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----------------~~~k~~~~~ 150 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWF--DIIIGGEDV-----------------THHKPDPEG 150 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCC--SEEECGGGC-----------------SSCTTSTHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhe--eeeeehhhc-----------------CCCCCChHH
Confidence 4689999999999999999999999988888888888875311 111111000 000111122
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe----ccccHHHhhc-ccEEeeCCCchHHHHHHH
Q 012767 256 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADATDAARSA-ADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 256 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~----~~~~~~a~~a-aDivl~~~~l~~i~~~i~ 320 (456)
-..+++.+.-....++++||+.||++|++.|++++++ .++.+..+.. ||+++. ++..+...+.
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 218 (225)
T 3d6j_A 151 LLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIS--TLGQLISVPE 218 (225)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEES--SGGGGC----
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEEC--CHHHHHHhhh
Confidence 2334444444455799999999999999999998887 3444444544 898884 4555555543
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.46 E-value=2.8e-07 Score=84.99 Aligned_cols=126 Identities=10% Similarity=0.057 Sum_probs=90.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+++. ....-.|+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 159 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLF--DHVLSVDAV-----------------RLYKTAPA 159 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTC--SEEEEGGGT-----------------TCCTTSHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhc--CEEEEeccc-----------------CCCCcCHH
Confidence 46789999999999999999999999998888888888885321 111111000 01111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe----ccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~----~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
--..+.+.+.-....|+|+||+.||+.|.+.|++++++ +++.+..+..+|+++ +++..+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~--~~~~el~~~l~~ 228 (233)
T 3umb_A 160 AYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAG--HDMRDLLQFVQA 228 (233)
T ss_dssp HHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEE--SSHHHHHHHHHC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEE--CCHHHHHHHHHH
Confidence 22344555554556799999999999999999999999 555555667799988 568888877763
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.45 E-value=3.2e-07 Score=86.26 Aligned_cols=122 Identities=16% Similarity=0.162 Sum_probs=83.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+++. ....-.|+
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~ 174 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSL-----------------PEIKPHPA 174 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTS-----------------SSCTTSSH
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE--EEEEecccC-----------------CCCCcCHH
Confidence 56789999999999999999999999999999999999985211 111111110 00111233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE-ecc----ccHHHhhcccEEeeCCCchHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VAD----ATDAARSAADIVLTEPGLNVIIT 317 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~~----~~~~a~~aaDivl~~~~l~~i~~ 317 (456)
--..+++.+.-....|+|+||+.||++|.+.|++++. +.. +.+.....+|+++. ++..+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~--~~~el~~ 240 (243)
T 2hsz_A 175 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILK 240 (243)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGG
T ss_pred HHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEEC--CHHHHHH
Confidence 3344556665556679999999999999999999844 443 23445677899884 4655543
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.44 E-value=3.1e-07 Score=84.44 Aligned_cols=124 Identities=12% Similarity=0.136 Sum_probs=85.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+........+.+.+|+.... ..++.+.+. ....-.|+
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 156 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF--DHLISVDEV-----------------RLFKPHQK 156 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC--SEEEEGGGT-----------------TCCTTCHH
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc--ceeEehhhc-----------------ccCCCChH
Confidence 56789999999999999999999999998888888999875211 111111000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe----ccccHHHhhcccEEeeCCCchHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~----~~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
--..+.+.+.-....|+++||+.||+.|.+.|++++++ +++.+..+..+|+++. ++..+..++
T Consensus 157 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (230)
T 3um9_A 157 VYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHHTC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHHHH
Confidence 22344455544456799999999999999999999998 4444555678899884 477666544
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.42 E-value=3.1e-07 Score=82.28 Aligned_cols=119 Identities=16% Similarity=0.114 Sum_probs=81.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
.+.|++.++++.|++.|+++.++|+....... ..+.+|+.... ..++.+.+. ....-.|+
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f--~~~~~~~~~-----------------~~~Kp~~~ 144 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF--TEILTSQSG-----------------FVRKPSPE 144 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE--EEEECGGGC-----------------CCCTTSSH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe--eeEEecCcC-----------------CCCCCCcH
Confidence 35789999999999999999999999988777 77888774210 001110000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee-EEeccccHHHhhcccEEeeCCCchHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
--..+++.++-....|+++||+.||++|++.|+++ |+|+++. . .+|+++. ++..+..++
T Consensus 145 ~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 145 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C---TTEEECS--STTHHHHHT
T ss_pred HHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEeC--CHHHHHHHH
Confidence 22345555555556799999999999999999998 8888765 3 6888874 466665543
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.42 E-value=3.2e-07 Score=85.34 Aligned_cols=124 Identities=13% Similarity=0.074 Sum_probs=84.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++.. ....-.|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 170 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF--KYIAGSNLD-----------------GTRVNKNE 170 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTT-----------------SCCCCHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE--EEEEecccc-----------------CCCCCCHH
Confidence 46799999999999999999999999999999999999885211 111111000 00001111
Q ss_pred hHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCe---eEEeccccHHH--hhcccEEeeCCCchHHHHHH
Q 012767 255 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADI---GIAVADATDAA--RSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~Adv---GIa~~~~~~~a--~~aaDivl~~~~l~~i~~~i 319 (456)
--..+.+.+.-. ...|+++||+.||+.|.+.|++ +++++++.... +..+|+++. ++..+..+|
T Consensus 171 ~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l 239 (240)
T 3sd7_A 171 VIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVE--NVESIKDIL 239 (240)
T ss_dssp HHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEES--SSTTHHHHH
T ss_pred HHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEEC--CHHHHHHHh
Confidence 122344555545 5679999999999999999999 55555444333 478999884 577776654
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=98.42 E-value=6.7e-07 Score=79.91 Aligned_cols=131 Identities=13% Similarity=0.107 Sum_probs=85.1
Q ss_pred cccCceEEEEEeeecccC--CCChHHHHHHHHHhcccCCCChHHHHHHHhhcCc-hhh-hhcceEEEeecCCCCCceEEE
Q 012767 21 LTLNKLTVDKNLIEIFAG--GVDADTVVLMAARASQVENLDVIDAAIVGMLADP-KEA-RADIQEVHFLPFDPTGKRTAL 96 (456)
Q Consensus 21 LT~~~~~v~~~~i~~~~~--~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~-~~~-~~~~~~~~~~pf~~~~k~~~v 96 (456)
||+|+|.|.++.. +.. +.+.++++.+++.++..++| |+++||+.++... ... ....+.++.+|.. ...+
T Consensus 1 LT~G~p~V~~v~~--~~~~~~~~~~~lL~laaslE~~SeH-PlA~AIv~~a~~~~~~~~~~~~~~f~~i~G~---Gv~a- 73 (165)
T 2arf_A 1 AGHMVPRVMRVLL--LGDVATLPLRKVLAVVGTAEASSEH-PLGVAVTKYCKEELGTETLGYCTDFQAVPGC---GIGC- 73 (165)
T ss_dssp CCCCCCCEEEEEE--CCCTTTSCHHHHHHHHHHHHTTSCS-TTHHHHHHHHHHHHTCCCCCCEEEEEEETTT---EEEE-
T ss_pred CCCceeEEEEEEe--eCCcCCCCHHHHHHHHHHHHccCCC-hHHHHHHHHHHHhcCCCCCCCcCceEEecCc---cEEE-
Confidence 8999999988542 221 35778999999999999887 9999999887422 100 0112233334322 2222
Q ss_pred EEEec------------------------------CCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeE
Q 012767 97 TYIDS------------------------------EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLA 146 (456)
Q Consensus 97 ~~~~~------------------------------~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~ 146 (456)
.+.+. ..+.+.+..|++.++.+... .+...+...+..+..+|.++++
T Consensus 74 ~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~~~~~~~~~~~~~~~~G~T~v~ 150 (165)
T 2arf_A 74 KVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGL---TISSDVSDAMTDHEMKGQTAIL 150 (165)
T ss_dssp EEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHC---SSCHHHHHHHHHHHTTTSEEEE
T ss_pred EEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCC---CCCHHHHHHHHHHHhCCCeEEE
Confidence 22211 11235677899999865321 2233455566778889999999
Q ss_pred EeeeecCCCCcCCCCCCceEeEecccCC
Q 012767 147 VAYQEVPEGSKESSGSPWQFIGLIPLFD 174 (456)
Q Consensus 147 vA~~~~~~~~~~~~e~~~~~lG~i~l~d 174 (456)
||.+. .++|++++.|
T Consensus 151 va~dg-------------~~~g~i~l~D 165 (165)
T 2arf_A 151 VAIDG-------------VLCGMIAIAD 165 (165)
T ss_dssp EEETT-------------EEEEEEEECC
T ss_pred EEECC-------------EEEEEEEEEC
Confidence 99876 8999999987
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.40 E-value=8.1e-07 Score=82.88 Aligned_cols=126 Identities=18% Similarity=0.128 Sum_probs=82.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+....+. |+.....+..++.+++. ....-.|+
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~-----------------~~~kp~~~ 170 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDV-----------------KYGKPNPE 170 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTC-----------------SSCTTSSH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhC-----------------CCCCCChH
Confidence 5679999999999999999999999887777666666 77532100112222110 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee-EEeccccHH----HhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADATDA----ARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~~~~----a~~aaDivl~~~~l~~i~~~i~ 320 (456)
--..+.+.+.-....|+|+||+.||+.|.+.|+++ |.+.++... ....+|+++ +++..+..++.
T Consensus 171 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~s~~el~~~l~ 239 (243)
T 3qxg_A 171 PYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLF--PSMQTLCDSWD 239 (243)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEE--SCHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 33345555554556799999999999999999984 555543222 234689988 55887776664
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.40 E-value=8e-07 Score=81.65 Aligned_cols=124 Identities=10% Similarity=0.078 Sum_probs=82.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCc---HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccC
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQ---LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 252 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~---~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~ 252 (456)
+.|++.++++.|++.|+++.++|+.. ........+.+|+.... ..++.+. ++ ....-.
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f--~~~~~~~------------~~-----~~~kp~ 160 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI--DKTFFAD------------EV-----LSYKPR 160 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC--SEEEEHH------------HH-----TCCTTC
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh--hhheecc------------cc-----CCCCCC
Confidence 47899999999999999999999998 88888888888874211 1111100 00 001111
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCC-CchhhhhhcCeeEEe---ccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAV---ADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvGIa~---~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
|+--..+.+.+.-....|+++||+. ||+.|++.|++++++ +++....+..+|+++ +++..+..++.
T Consensus 161 ~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 230 (235)
T 2om6_A 161 KEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVIE 230 (235)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHHH
Confidence 2222234444444456799999999 999999999999998 333333345578777 45777776654
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.39 E-value=1.3e-06 Score=80.44 Aligned_cols=124 Identities=18% Similarity=0.162 Sum_probs=86.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.+.++.|++. +++.++|+.....+....+.+|+.... ..++.+. +. ....-.|+
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f--~~~~~~~------------~~-----~~~kp~~~ 159 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF--DSITTSE------------EA-----GFFKPHPR 159 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEHH------------HH-----TBCTTSHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc--ceeEecc------------cc-----CCCCcCHH
Confidence 4678999999999999 999999999998888888888874211 0111100 00 01111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCC-CchhhhhhcC---eeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKAD---IGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~Ad---vGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
--..+.+.+.-....|+++||+. ||+.|.+.|| ++++++++.+..+..+|+++ +++..+..++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~--~~~~el~~~l~ 227 (234)
T 3u26_A 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEE--SSTHHHHHHHH
T ss_pred HHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEee--CCHHHHHHHHH
Confidence 22344555554456799999997 9999999999 56666777777777899998 45777777665
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.39 E-value=7.7e-07 Score=82.30 Aligned_cols=124 Identities=14% Similarity=0.126 Sum_probs=85.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+... + ..++.+.+. ....-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~-f-~~i~~~~~~-----------------~~~Kp~~~ 143 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGY-F-DLIVGGDTF-----------------GEKKPSPT 143 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG-C-SEEECTTSS-----------------CTTCCTTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHH-h-eEEEecCcC-----------------CCCCCChH
Confidence 4689999999999999999999999999888889999997421 1 111111110 01122233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee-EEeccc--cHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA--TDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~--~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
--..+++.+.-....|+++||+.||++|.+.||+. |++..+ .... ..+|+++ +++..+..++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~--~~~~el~~~l~ 209 (222)
T 2nyv_A 144 PVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTL--SRPSDLVKLMD 209 (222)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEE--CCHHHHHHHHH
Confidence 33455566655566799999999999999999998 666532 2222 6688887 45777776654
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.39 E-value=8.5e-07 Score=82.39 Aligned_cols=127 Identities=15% Similarity=0.064 Sum_probs=80.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
.++.|++.++++.|++.|+++.++|+..........+. |+.....+..++.+++. ....-.|
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~-----------------~~~kp~~ 168 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDV-----------------KYGKPNP 168 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGC-----------------SSCTTSS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccC-----------------CCCCCCC
Confidence 35679999999999999999999999887777766666 77532100111211100 0111222
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee-EEeccccH--H--HhhcccEEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADATD--A--ARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~~~--~--a~~aaDivl~~~~l~~i~~~i~ 320 (456)
+--..+++.+.-....|+|+||+.||+.|.+.||++ |.+..+.. . ....+|+++ +++..+..++.
T Consensus 169 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 238 (247)
T 3dv9_A 169 EPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLF--HSMPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 333345555555556799999999999999999975 44443322 1 224799998 45777776665
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.38 E-value=6.8e-07 Score=83.68 Aligned_cols=138 Identities=13% Similarity=0.044 Sum_probs=89.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHH-HHhhc-ccccccC
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE-LIEKA-DGFAGVF 252 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~-~~~~~-~v~a~~~ 252 (456)
++.|++.++++.|++.|+++.++|+.....+..+.+ |+.. + ..++.++..... . .+.. ..+.. ..+.+-.
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~--~-~~v~~~~~~~~~-~--~~~~~~~kp~p~~~~~~~ 148 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVE--K-DRIYCNHASFDN-D--YIHIDWPHSCKGTCSNQC 148 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSC--G-GGEEEEEEECSS-S--BCEEECTTCCCTTCCSCC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCC--C-CeEEeeeeEEcC-C--ceEEecCCCCcccccccc
Confidence 578999999999999999999999999888887777 6632 1 222221110000 0 0000 00000 0011113
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhc--ccEEeeCCCchHHHHHHHHH
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSA--ADIVLTEPGLNVIITAVLIS 322 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~a--aDivl~~~~l~~i~~~i~~~ 322 (456)
...|..+++.+......++|+||+.||++|.+.||+.++..+..+..... +|+++ +++..+..++...
T Consensus 149 ~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~~ 218 (236)
T 2fea_A 149 GCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIENV 218 (236)
T ss_dssp SSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHTS
T ss_pred CCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHHh
Confidence 56788999999877889999999999999999999998754322333332 67766 5688887777543
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.37 E-value=4.8e-07 Score=81.61 Aligned_cols=121 Identities=17% Similarity=0.114 Sum_probs=83.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+++. ....-.|+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 149 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF--DIVLSGEEF-----------------KESKPNPE 149 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGC-----------------SSCTTSSH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhe--eeEeecccc-----------------cCCCCChH
Confidence 46789999999999999999999999999999999999885211 111111000 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccc--cHHHhhcccEEeeCCCchHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA--TDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~--~~~a~~aaDivl~~~~l~~i~ 316 (456)
--..+++.+.-....|+++||+.||+.|.+.||+++++.+. .......+|+++. ++..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el~ 211 (214)
T 3e58_A 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDVL 211 (214)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGGG
T ss_pred HHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHHH
Confidence 33445555555556799999999999999999998888642 3334477898884 455543
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.36 E-value=1.3e-06 Score=82.64 Aligned_cols=127 Identities=14% Similarity=0.116 Sum_probs=85.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+....+ ..++.++.. ....-.|+
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~-----------------~~~kp~~~ 172 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP-ASTVFATDV-----------------VRGRPFPD 172 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC-SEEECGGGS-----------------SSCTTSSH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC-ceEecHHhc-----------------CCCCCCHH
Confidence 567899999999999999999999999988888888887643211 111111100 00111122
Q ss_pred hHHHHHHHHhhcC-CEEEEecCCCCchhhhhhcCe---eEEecc------------------------ccHHHh-hcccE
Q 012767 255 HKYEIVKHLQARN-HICGMIGNGVNDAPALKKADI---GIAVAD------------------------ATDAAR-SAADI 305 (456)
Q Consensus 255 ~K~~iV~~lq~~g-~~v~~iGDG~ND~~aLk~Adv---GIa~~~------------------------~~~~a~-~aaDi 305 (456)
--..+++.+.-.. ..|+||||+.||+.|.+.|++ +|+++. +.+..+ ..+|+
T Consensus 173 ~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~ 252 (277)
T 3iru_A 173 MALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHY 252 (277)
T ss_dssp HHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCE
Confidence 2234555565556 789999999999999999995 555552 223334 34899
Q ss_pred EeeCCCchHHHHHHHH
Q 012767 306 VLTEPGLNVIITAVLI 321 (456)
Q Consensus 306 vl~~~~l~~i~~~i~~ 321 (456)
|+ +++..+..++..
T Consensus 253 v~--~~~~el~~~l~~ 266 (277)
T 3iru_A 253 VI--DSVADLETVITD 266 (277)
T ss_dssp EE--SSGGGTHHHHHH
T ss_pred Ee--cCHHHHHHHHHH
Confidence 98 558888777753
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.36 E-value=1e-06 Score=82.93 Aligned_cols=128 Identities=17% Similarity=0.092 Sum_probs=85.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccc-ccccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG-FAGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v-~a~~~P 253 (456)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+... ++..++.+++ .. ...-.|
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-f~~~i~~~~~-----------------~~~~~Kp~~ 171 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTEL-AGEHIYDPSW-----------------VGGRGKPHP 171 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHH-HCSCEECGGG-----------------GTTCCTTSS
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhh-ccceEEeHhh-----------------cCcCCCCCh
Confidence 3568999999999999999999999999899999898887411 0000111100 00 111112
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee-EEeccc-------cHH-HhhcccEEeeCCCchHHHHHHHHH
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA-------TDA-ARSAADIVLTEPGLNVIITAVLIS 322 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~-------~~~-a~~aaDivl~~~~l~~i~~~i~~~ 322 (456)
+--..+++.+.-....|++|||+.||+.|.+.|+++ |.+..+ .+. ....+|+++ +++..+..++...
T Consensus 172 ~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~~ 247 (259)
T 4eek_A 172 DLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAEA 247 (259)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHhc
Confidence 222344555554456799999999999999999998 555433 222 334589988 5588888887643
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.36 E-value=1.1e-06 Score=80.95 Aligned_cols=122 Identities=10% Similarity=0.072 Sum_probs=82.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+. ....-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~~ 163 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF--DSIIGSGDT-----------------GTIKPSPE 163 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEETSS-----------------SCCTTSSH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe--eeEEccccc-----------------CCCCCChH
Confidence 46789999999999999999999999999999999999985211 111111000 01111222
Q ss_pred hHHHHHHHHhhcCC-EEEEecCCCCchhhhhhcCe-eEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQARNH-ICGMIGNGVNDAPALKKADI-GIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~g~-~v~~iGDG~ND~~aLk~Adv-GIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
--..+++.+.-... .|+++||+.||+.|.+.||+ +|.++++.. ..+|+++ +++..+..++.
T Consensus 164 ~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l~ 226 (231)
T 3kzx_A 164 PVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFIC 226 (231)
T ss_dssp HHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHHH
Confidence 23455566655555 79999999999999999996 777765543 3567776 45777776664
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.34 E-value=1.2e-06 Score=78.06 Aligned_cols=126 Identities=12% Similarity=0.116 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhC--CCCCCCCCccccCCchhhhhhcCC
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLG--MGTNMYPSSALSGQDRDESIVALP 237 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~---------------~~a~~ia~~lG--i~~~~~~~~~l~g~~~~~~~~~~~ 237 (456)
++.|++.++++.|++.|+++.++|+... ..+..+.+.+| +..- +......+++
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~~~~--------- 96 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAI-FMCPHGPDDG--------- 96 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEE-EEECCCTTSC---------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEE-EEcCCCCCCC---------
Confidence 4679999999999999999999999875 45566667777 3210 0000000000
Q ss_pred hHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe---eEEeccccHHHh----hcccEEeeCC
Q 012767 238 VDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI---GIAVADATDAAR----SAADIVLTEP 310 (456)
Q Consensus 238 ~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv---GIa~~~~~~~a~----~aaDivl~~~ 310 (456)
.....-.|+-=..+.+.+.-....++||||+.||+.|.+.|++ +|..+.+..... ..+|+++ +
T Consensus 97 --------~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~--~ 166 (179)
T 3l8h_A 97 --------CACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVC--E 166 (179)
T ss_dssp --------CSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEE--S
T ss_pred --------CCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEe--c
Confidence 0011112222234555555556779999999999999999995 555554444443 4579888 4
Q ss_pred CchHHHHHHH
Q 012767 311 GLNVIITAVL 320 (456)
Q Consensus 311 ~l~~i~~~i~ 320 (456)
++..+..++.
T Consensus 167 ~l~el~~~l~ 176 (179)
T 3l8h_A 167 DLAAVAEQLL 176 (179)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 5777776664
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.34 E-value=1.9e-07 Score=94.81 Aligned_cols=114 Identities=12% Similarity=0.128 Sum_probs=73.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhc-ccccccC
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA-DGFAGVF 252 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~v~a~~~ 252 (456)
-.++|++++.|+.|++.|++|+|+||.....+..+|.++|+.-++-+. .+.|........+ .+.... ....-+.
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~-~Vig~~l~~~~dG----~~tg~~~~~~p~~~ 294 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEE-KVLGLRLMKDDEG----KILPKFDKDFPISI 294 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGG-GEEEECEEECTTC----CEEEEECTTSCCCS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcc-eEEEeEEEEecCC----ceeeeecCccceeC
Confidence 347899999999999999999999999999999999999875332222 2222211100000 000000 0001234
Q ss_pred chhHHHHHHHHhhc---CCEEEEecCCCCchhhhhh-cCeeEEe
Q 012767 253 PEHKYEIVKHLQAR---NHICGMIGNGVNDAPALKK-ADIGIAV 292 (456)
Q Consensus 253 P~~K~~iV~~lq~~---g~~v~~iGDG~ND~~aLk~-AdvGIa~ 292 (456)
.+.|...|+.+-.. ...++++|||.||.+||+. +|.++++
T Consensus 295 ~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 295 REGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp THHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred CCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 57799999876432 2358899999999999986 4554444
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=6.7e-07 Score=85.71 Aligned_cols=129 Identities=11% Similarity=-0.003 Sum_probs=85.2
Q ss_pred CCCCcchHHHHHHHHhCCC--eEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccccc
Q 012767 174 DPPIHDSAETIRRALSLGL--GVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 251 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi--~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~ 251 (456)
-++.|++.++++.|++.|+ ++.++|+.....+..+.+.+|+.... ..++.++..... .....-
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~v~~~~~~~~~-------------~~~~Kp 205 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF--DGLTYCDYSRTD-------------TLVCKP 205 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSC--SEEECCCCSSCS-------------SCCCTT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccccc--ceEEEeccCCCc-------------ccCCCc
Confidence 3578999999999999999 99999999999999999999986321 111111110000 000111
Q ss_pred CchhHHHHHHHHhhcC-CEEEEecCCCCchhhhhhcCeeEEeccccHHH------hhcccEEeeCCCchHHHHHH
Q 012767 252 FPEHKYEIVKHLQARN-HICGMIGNGVNDAPALKKADIGIAVADATDAA------RSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 252 ~P~~K~~iV~~lq~~g-~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a------~~aaDivl~~~~l~~i~~~i 319 (456)
.|+--..+.+.+.-.. ..|+|+||+.||+.|.+.||+|.+|+.+.... ...+|+++. ++..+..++
T Consensus 206 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~--sl~el~~~l 278 (282)
T 3nuq_A 206 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVIS--DILELPHVV 278 (282)
T ss_dssp SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEES--SGGGGGGTS
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeC--CHHHHHHHh
Confidence 1122223444444445 78999999999999999999999887543322 337788884 466665443
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.31 E-value=1.7e-06 Score=79.67 Aligned_cols=121 Identities=12% Similarity=0.080 Sum_probs=78.5
Q ss_pred CCcchHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 176 PIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~-Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
+.|++.++++.|++. |+++.++|+.....+....+.+|+.... + ..+.+.+ .. ..|.
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~------------------~~--~~~k 151 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADD------------------AL--DRNE 151 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTT------------------CS--SGGG
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhc-C-cceecCC------------------Cc--Cccc
Confidence 578999999999999 9999999999998888888888875321 1 1111110 00 0111
Q ss_pred hHHH----HHHHHh--hcCCEEEEecCCCCchhhhhhcCee---EEeccccHHHhh--cccEEeeCCCchHHHHHHH
Q 012767 255 HKYE----IVKHLQ--ARNHICGMIGNGVNDAPALKKADIG---IAVADATDAARS--AADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~----iV~~lq--~~g~~v~~iGDG~ND~~aLk~AdvG---Ia~~~~~~~a~~--aaDivl~~~~l~~i~~~i~ 320 (456)
.+.. +.+.+. -....|+|+||+.||+.|.+.||++ ++.+.+...... .+|+++. ++..+..++.
T Consensus 152 ~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~--~~~el~~~l~ 226 (234)
T 2hcf_A 152 LPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVLA 226 (234)
T ss_dssp HHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeC--CHHhHHHHHH
Confidence 1222 233443 2345799999999999999999955 444433333332 3888884 4555555543
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=1.7e-06 Score=80.44 Aligned_cols=124 Identities=14% Similarity=0.085 Sum_probs=82.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+++. ....-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 165 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVL--DSCLSADDL-----------------KIYKPDPR 165 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGT-----------------TCCTTSHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHc--CEEEEcccc-----------------CCCCCCHH
Confidence 46799999999999999999999999998888888999875211 111111000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe---ccccHHHhhcc-cEEeeCCCchHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV---ADATDAARSAA-DIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~---~~~~~~a~~aa-Divl~~~~l~~i~~~i 319 (456)
--..+.+.+.-....|+++||+.||+.|.+.||+.... ++..+.....+ |+++ +++..+..++
T Consensus 166 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 232 (240)
T 2no4_A 166 IYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQV--NSLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceee--CCHHHHHHHH
Confidence 22344455554456799999999999999999966544 33322233456 8887 4577776655
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.27 E-value=9.4e-07 Score=81.59 Aligned_cols=124 Identities=10% Similarity=0.080 Sum_probs=83.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+++. ....-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 155 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPV-----------------QVYKPDNR 155 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGG-----------------TCCTTSHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh--heEEEeccc-----------------CCCCCCHH
Confidence 46799999999999999999999999988888888888874211 111111100 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec----cccHHHhhcccEEeeCCCchHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA----DATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~----~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
--..+++.+.-....|+|+||+.||+.|.+.|++++++- +..+..+..+|+++ +++..+..++
T Consensus 156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 222 (232)
T 1zrn_A 156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVELF 222 (232)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTTC
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 233445555544567999999999999999999998883 22233345688887 4466665544
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.26 E-value=5.3e-07 Score=85.10 Aligned_cols=67 Identities=12% Similarity=0.219 Sum_probs=56.9
Q ss_pred cccCch--hHHHHHHHHhhcCCEEEEecCCCCchhhhhhc--CeeEEeccccHHHhhcccEEeeC-CCchHHHHHHH
Q 012767 249 AGVFPE--HKYEIVKHLQARNHICGMIGNGVNDAPALKKA--DIGIAVADATDAARSAADIVLTE-PGLNVIITAVL 320 (456)
Q Consensus 249 a~~~P~--~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~A--dvGIa~~~~~~~a~~aaDivl~~-~~l~~i~~~i~ 320 (456)
.++.|. +|...++.|.+.-. |+++||+.||.+||+.| ++||||+|+ ++.||+++.+ ++-.++..+|+
T Consensus 152 lei~~~~~~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 152 IELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp EEEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHH
Confidence 355554 79999999988744 99999999999999999 999999997 6789999877 66778887776
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.25 E-value=3.3e-06 Score=77.69 Aligned_cols=122 Identities=12% Similarity=0.100 Sum_probs=82.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|+ .|+++.++|+..........+.+|+.... ..++.+++. ....-.|+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 166 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYF--KKIILSEDL-----------------GVLKPRPE 166 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGT-----------------TCCTTSHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhc--eeEEEeccC-----------------CCCCCCHH
Confidence 46789999999999 99999999999888888888888875211 111111000 00111111
Q ss_pred hHHHHHHHHhhcCCEEEEecCCC-CchhhhhhcCeeEEeccccH--HHhhcccEEeeCCCchHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAVADATD--AARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvGIa~~~~~~--~a~~aaDivl~~~~l~~i~~~ 318 (456)
--..+.+.+.-....|++|||+. ||+.|.+.||+++++.+... .....+|+++. ++..+..+
T Consensus 167 ~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~--sl~e~~~~ 231 (240)
T 3qnm_A 167 IFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIH--SLKELMNL 231 (240)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEES--STHHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEEC--CHHHHHHH
Confidence 12233444444456799999996 99999999999999985444 55667899984 46665544
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.24 E-value=9.4e-07 Score=84.69 Aligned_cols=67 Identities=22% Similarity=0.243 Sum_probs=58.8
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
..|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..+..||+|+.+++-.++..+|+
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 4788888777654 346999999999999999999999999999999999999998888889988876
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.24 E-value=8.9e-06 Score=75.68 Aligned_cols=125 Identities=14% Similarity=0.183 Sum_probs=82.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+++. ....-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 154 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF--EHVIISDFE-----------------GVKKPHPK 154 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTCHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc--cEEEEeCCC-----------------CCCCCCHH
Confidence 36789999999999999999999999888888888888875211 111111000 00011112
Q ss_pred hHHHHHHHHhhcCCEEEEecCCC-CchhhhhhcCeeEEe---ccccHHHhh---cccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAV---ADATDAARS---AADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvGIa~---~~~~~~a~~---aaDivl~~~~l~~i~~~i~ 320 (456)
--..+.+.+.-....|+|+||+. ||+.|.+.||++.+. +........ .+|+++ +++..+..++.
T Consensus 155 ~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 225 (241)
T 2hoq_A 155 IFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEI--DNLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEE--CCHHHHHHHHH
Confidence 11234444444456799999998 999999999998654 233333332 688887 45777776654
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.23 E-value=1.1e-06 Score=85.93 Aligned_cols=72 Identities=29% Similarity=0.294 Sum_probs=62.1
Q ss_pred cccCch--hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEee-CCCchHHHHHHH
Q 012767 249 AGVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT-EPGLNVIITAVL 320 (456)
Q Consensus 249 a~~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~-~~~l~~i~~~i~ 320 (456)
.++.|. .|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++.||+++. +++-.+|..+|+
T Consensus 216 lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 216 AEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp EEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred eEecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 455554 799888887654 246999999999999999999999999999999999999998 888899988876
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.22 E-value=2.3e-06 Score=78.19 Aligned_cols=115 Identities=12% Similarity=0.039 Sum_probs=79.3
Q ss_pred CCCcchHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 175 PPIHDSAETIRRALSLG-LGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~G-i~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
++.|++.+.++.|++.| +++.++|+........+.+.+|+.... . .+++. +
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f--~------------------------~~~~~--~ 156 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF--D------------------------HIEVM--S 156 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC--S------------------------EEEEE--S
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh--h------------------------eeeec--C
Confidence 46789999999999999 999999999888888888888874210 0 01111 2
Q ss_pred hhHHHHHHH----HhhcCCEEEEecCCC-CchhhhhhcCeeEEec-------cccHHHhhcc-cEEeeCCCchHHHHHH
Q 012767 254 EHKYEIVKH----LQARNHICGMIGNGV-NDAPALKKADIGIAVA-------DATDAARSAA-DIVLTEPGLNVIITAV 319 (456)
Q Consensus 254 ~~K~~iV~~----lq~~g~~v~~iGDG~-ND~~aLk~AdvGIa~~-------~~~~~a~~aa-Divl~~~~l~~i~~~i 319 (456)
..|..+++. +.-....|+++||+. ||+.|.+.|++++++- ++.......+ |+++ +++..+..++
T Consensus 157 kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~l 233 (234)
T 3ddh_A 157 DKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSLL 233 (234)
T ss_dssp CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHHC
T ss_pred CCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHhc
Confidence 234444443 333456799999996 9999999999998872 3333323344 8887 4577776543
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.20 E-value=1.3e-06 Score=84.45 Aligned_cols=71 Identities=21% Similarity=0.267 Sum_probs=60.8
Q ss_pred ccCc--hhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 250 GVFP--EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 250 ~~~P--~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
++.| .+|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++-.++..+|+
T Consensus 209 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 209 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 4444 3688888777654 346999999999999999999999999999999999999999888999998876
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.19 E-value=6.1e-07 Score=81.60 Aligned_cols=119 Identities=13% Similarity=0.090 Sum_probs=79.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.... ..++.+.+. ....-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~KP~~~ 142 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDT-----------------PKRKPDPL 142 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGS-----------------SCCTTSSH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc--cEEEecCcC-----------------CCCCCCcH
Confidence 4678999999999999 999999999988888888888764210 011110000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEecc----ccHHHhhcccEEeeCCCchHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD----ATDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~----~~~~a~~aaDivl~~~~l~~i~ 316 (456)
--..+.+.+.-....|+++||+.||+.|.+.||+++++.+ +.+..+. +|+++. ++..+.
T Consensus 143 ~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~ 205 (209)
T 2hdo_A 143 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDIL 205 (209)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGG
T ss_pred HHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHH
Confidence 2244555555455679999999999999999999999753 2344444 898884 355444
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.16 E-value=7.7e-06 Score=75.22 Aligned_cols=124 Identities=11% Similarity=0.101 Sum_probs=81.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++. +++.++|+.....+....+.+|+.... ..++.+.+. ....-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 162 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFF--KDIFVSEDT-----------------GFQKPMKE 162 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGT-----------------TSCTTCHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhh--heEEEeccc-----------------CCCCCChH
Confidence 4678999999999999 999999999988888888888875211 111111000 00011111
Q ss_pred hHHHHHHHHh-hcCCEEEEecCCC-CchhhhhhcCee-EEeccc--cHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQ-ARNHICGMIGNGV-NDAPALKKADIG-IAVADA--TDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq-~~g~~v~~iGDG~-ND~~aLk~AdvG-Ia~~~~--~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
--..+.+.+. -....|+||||+. ||+.|.+.||++ |.+..+ .+..+..+|+++ +++..+..++.
T Consensus 163 ~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~ 231 (238)
T 3ed5_A 163 YFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEI--RKLEELYHILN 231 (238)
T ss_dssp HHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEE--SSGGGHHHHHT
T ss_pred HHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEE--CCHHHHHHHHH
Confidence 1122333333 2335699999998 999999999995 444433 555667889998 45888877664
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=8.8e-06 Score=75.01 Aligned_cols=135 Identities=18% Similarity=0.181 Sum_probs=83.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc---------------HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChH
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQ---------------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 239 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~---------------~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 239 (456)
++.|++.++|+.|++.|+++.++|+.. ...+..+.+.+|+. +...+......+....
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f~~~~~~~~~~~~~~~----- 121 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD---LDGIYYCPHHPQGSVE----- 121 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCBTTCSSG-----
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc---eEEEEECCcCCCCccc-----
Confidence 678999999999999999999999998 36677778888875 2111111111000000
Q ss_pred HHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee--EEeccc---cHHHhhcccEEeeCCCchH
Q 012767 240 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVADA---TDAARSAADIVLTEPGLNV 314 (456)
Q Consensus 240 ~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG--Ia~~~~---~~~a~~aaDivl~~~~l~~ 314 (456)
+ ......+..-.|+--..+++.+.-....++||||+.||+.+.+.|++. |.+..+ .+.....+|+++ +++..
T Consensus 122 ~-~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi--~~l~e 198 (211)
T 2gmw_A 122 E-FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLAD 198 (211)
T ss_dssp G-GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGG
T ss_pred c-cCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEe--CCHHH
Confidence 0 000001112223333344555554556799999999999999999975 444322 233334589888 45787
Q ss_pred HHHHHH
Q 012767 315 IITAVL 320 (456)
Q Consensus 315 i~~~i~ 320 (456)
+..++.
T Consensus 199 l~~~l~ 204 (211)
T 2gmw_A 199 LPQAIK 204 (211)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776654
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.15 E-value=1.3e-06 Score=83.73 Aligned_cols=72 Identities=19% Similarity=0.284 Sum_probs=61.2
Q ss_pred cccCch--hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 249 AGVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 249 a~~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.++.|. .|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++..++..+|+
T Consensus 182 ~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 182 LEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred EEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 345554 688888777654 346999999999999999999999999999999999999999888899988775
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.14 E-value=5.8e-06 Score=77.74 Aligned_cols=123 Identities=14% Similarity=0.155 Sum_probs=83.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|+ |+++.++|+.....+..+.+.+|+.... ..++.+++. ....-.|+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~ 151 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAK-----------------RVFKPHPD 151 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTSHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc--cEEEEcccc-----------------CCCCCCHH
Confidence 57799999999998 9999999999999888888999874211 111111000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccc---------------------------cHHHhhcccEEe
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA---------------------------TDAARSAADIVL 307 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~---------------------------~~~a~~aaDivl 307 (456)
--..+++.+.-....|+|+||+.||+.|.+.|+++.++.+. .+..+..+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (253)
T 1qq5_A 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (253)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee
Confidence 23344455544456799999999999999999999888754 122345688888
Q ss_pred eCCCchHHHHHHH
Q 012767 308 TEPGLNVIITAVL 320 (456)
Q Consensus 308 ~~~~l~~i~~~i~ 320 (456)
+++..+..++.
T Consensus 232 --~~~~el~~~l~ 242 (253)
T 1qq5_A 232 --PALGDLPRLVR 242 (253)
T ss_dssp --SSGGGHHHHHH
T ss_pred --CCHHHHHHHHH
Confidence 45777776664
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.14 E-value=3.2e-06 Score=78.89 Aligned_cols=122 Identities=11% Similarity=0.103 Sum_probs=83.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++. +++.++|+........+.+.+|+. ++ .++.++ .+ ....-.|+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~---f~-~~~~~~------------~~-----~~~kp~~~ 177 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP---WD-MLLCAD------------LF-----GHYKPDPQ 177 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC---CS-EECCHH------------HH-----TCCTTSHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC---cc-eEEeec------------cc-----ccCCCCHH
Confidence 4568999999999885 999999999998888888999874 11 111110 00 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEecc--------ccHHH--hhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD--------ATDAA--RSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~--------~~~~a--~~aaDivl~~~~l~~i~~~i~ 320 (456)
--..+++.+.-....|+||||+.||+.|.+.|++++++.+ +.+.. +..+|+++ +++..+..++.
T Consensus 178 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l~ 251 (254)
T 3umc_A 178 VYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHhc
Confidence 2223444454445679999999999999999999999975 22222 56789998 55888777664
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.14 E-value=4.4e-06 Score=77.56 Aligned_cols=121 Identities=9% Similarity=0.057 Sum_probs=83.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++. +++.++|+........+.+.+|+. +. .++.++ ......|.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~---f~-~~~~~~-------------------~~~~~kp~ 171 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP---WD-VIIGSD-------------------INRKYKPD 171 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC---CS-CCCCHH-------------------HHTCCTTS
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC---ee-EEEEcC-------------------cCCCCCCC
Confidence 5678999999999986 999999999999998999999884 11 111100 01111121
Q ss_pred --hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHH----------HhhcccEEeeCCCchHHHHHHHH
Q 012767 255 --HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDA----------ARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 255 --~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~----------a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
-=..+.+.+.-....|++|||+.||+.|.+.||+++++.+.... ....+|+++ +++..+..++..
T Consensus 172 ~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~ 248 (254)
T 3umg_A 172 PQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence 11223333433446799999999999999999999999752211 356789988 558888877753
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.14 E-value=7e-06 Score=76.64 Aligned_cols=122 Identities=16% Similarity=0.205 Sum_probs=79.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchh
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 255 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 255 (456)
+.|++.++++.|++.|+++.++|+.....+..+.+.+|+. . + ..++.+++. ....-.|+-
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~-f-~~~~~~~~~-----------------~~~Kp~p~~ 170 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S-F-DFALGEKSG-----------------IRRKPAPDM 170 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T-C-SEEEEECTT-----------------SCCTTSSHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c-e-eEEEecCCC-----------------CCCCCCHHH
Confidence 5689999999999999999999999888888888888874 2 1 122221110 011111221
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee-EEec--ccc-HHHh-hcccEEeeCCCchHHHHHH
Q 012767 256 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA--DAT-DAAR-SAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 256 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~--~~~-~~a~-~aaDivl~~~~l~~i~~~i 319 (456)
=..+.+.+.-....|+||||+.||+.|.+.|++. |++. .+. +..+ ..+|+++ +++..+..++
T Consensus 171 ~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~--~~~~el~~~l 237 (240)
T 2hi0_A 171 TSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIV--DTAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEE--CSHHHHHHHH
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEE--CCHHHHHHHh
Confidence 2234445544456799999999999999999994 3443 322 3333 3688887 4466665544
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=1.8e-06 Score=81.64 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=59.6
Q ss_pred ccCch--hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhc-------ccEEeeCCCchHHH
Q 012767 250 GVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSA-------ADIVLTEPGLNVII 316 (456)
Q Consensus 250 ~~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~a-------aDivl~~~~l~~i~ 316 (456)
++.|. .|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++. ||+++.+++-.++.
T Consensus 155 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva 234 (244)
T 1s2o_A 155 DLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAIL 234 (244)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHH
T ss_pred EeccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHH
Confidence 44443 688888777654 246999999999999999999999999999999985 88999888888998
Q ss_pred HHHH
Q 012767 317 TAVL 320 (456)
Q Consensus 317 ~~i~ 320 (456)
.+|+
T Consensus 235 ~~i~ 238 (244)
T 1s2o_A 235 EAIA 238 (244)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8876
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.13 E-value=1e-06 Score=82.53 Aligned_cols=123 Identities=15% Similarity=0.137 Sum_probs=75.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH-HHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG-RRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia-~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
++.|++.++++.|++.|+++.++|+.........- +..|+... + ..++.+++.+ .....-.|
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~-f-~~~~~~~~~~---------------~~~~Kp~~ 174 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL-F-SHIVLGDDPE---------------VQHGKPDP 174 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT-S-SCEECTTCTT---------------CCSCTTST
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh-e-eeEEecchhh---------------ccCCCCCh
Confidence 46889999999999999999999999866554322 22233211 0 1111111000 00011111
Q ss_pred hhHHHHHHHHhhcC--CEEEEecCCCCchhhhhhcC---eeEEeccccHHHhhcccEEeeCCCchHHH
Q 012767 254 EHKYEIVKHLQARN--HICGMIGNGVNDAPALKKAD---IGIAVADATDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 254 ~~K~~iV~~lq~~g--~~v~~iGDG~ND~~aLk~Ad---vGIa~~~~~~~a~~aaDivl~~~~l~~i~ 316 (456)
+--..+++.+.-.. ..|+||||+.||+.|.+.|| ++++.+++.+..+..||+++. ++..+.
T Consensus 175 ~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~--sl~el~ 240 (250)
T 3l5k_A 175 DIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLN--SLQDFQ 240 (250)
T ss_dssp HHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECS--CGGGCC
T ss_pred HHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeec--CHHHhh
Confidence 11123333333333 77999999999999999999 555556767778889999984 455543
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.12 E-value=6.1e-06 Score=75.53 Aligned_cols=123 Identities=11% Similarity=0.134 Sum_probs=79.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccc--ccC
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA--GVF 252 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a--~~~ 252 (456)
++.+++.+.++.++. ++.++|+........+.+.+|+... ++..++.++ .+ ... .-.
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~-~~~~~~~~~------------~~-----~~~~~kpk 145 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPY-FAPHIYSAK------------DL-----GADRVKPK 145 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGG-TTTCEEEHH------------HH-----CTTCCTTS
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHh-ccceEEecc------------cc-----ccCCCCcC
Confidence 356788888887764 9999999998888888888887421 101111110 00 001 111
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee-EEeccccH-------HHhhc-ccEEeeCCCchHHHHHHH
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADATD-------AARSA-ADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~~~-------~a~~a-aDivl~~~~l~~i~~~i~ 320 (456)
|+--..+++.+.-....|+++||+.||++|++.||++ |++.++.. ..++. +|+++. ++..+..++.
T Consensus 146 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 220 (229)
T 2fdr_A 146 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVIS--RMQDLPAVIA 220 (229)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHHH
T ss_pred HHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeec--CHHHHHHHHH
Confidence 2222344455544456799999999999999999998 77765543 35565 999884 5777766553
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.11 E-value=5.3e-06 Score=79.34 Aligned_cols=114 Identities=14% Similarity=0.031 Sum_probs=78.0
Q ss_pred CCcchHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 176 PIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~-Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
+.|++.+.++.|++. |+++.++|+.....+....+.+|+.. + ..++.+++.. ...-.|+
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f-~~i~~~~~~~-----------------~~kp~~~ 174 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--P-EYFITANDVK-----------------QGKPHPE 174 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--C-SSEECGGGCS-----------------SCTTSSH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--c-CEEEEcccCC-----------------CCCCChH
Confidence 568999999999999 99999999999988888888888752 1 1222221100 0111222
Q ss_pred hHHHHHHHHhh-------cCCEEEEecCCCCchhhhhhcCeeEEe---ccccHHHh-hcccEEeeC
Q 012767 255 HKYEIVKHLQA-------RNHICGMIGNGVNDAPALKKADIGIAV---ADATDAAR-SAADIVLTE 309 (456)
Q Consensus 255 ~K~~iV~~lq~-------~g~~v~~iGDG~ND~~aLk~AdvGIa~---~~~~~~a~-~aaDivl~~ 309 (456)
--..+.+.+.- ....|+++||+.||+.|++.|++++++ +++.+..+ ..||+++.+
T Consensus 175 ~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 175 PYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred HHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 23345555555 556799999999999999999987766 33333333 358988754
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.10 E-value=5.3e-06 Score=76.17 Aligned_cols=122 Identities=11% Similarity=0.110 Sum_probs=81.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++ |+++.++|+..........+.++- .+ ..++.+. ++ ......|+
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~---~f-d~i~~~~------------~~-----~~~KP~~~ 156 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV---EF-DHIITAQ------------DV-----GSYKPNPN 156 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS---CC-SEEEEHH------------HH-----TSCTTSHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC---cc-CEEEEcc------------cc-----CCCCCCHH
Confidence 578999999999999 899999999888777666554331 11 1111110 00 11122333
Q ss_pred hHHHH---HHHHhhcCCEEEEecCCC-CchhhhhhcCeeEEecccc-----------HHHhhcccEEeeCCCchHHHHHH
Q 012767 255 HKYEI---VKHLQARNHICGMIGNGV-NDAPALKKADIGIAVADAT-----------DAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~i---V~~lq~~g~~v~~iGDG~-ND~~aLk~AdvGIa~~~~~-----------~~a~~aaDivl~~~~l~~i~~~i 319 (456)
-...+ .+.+.-....|+||||+. ||+.|.+.|++++++.+.. +.....+|+++ +++..+..++
T Consensus 157 ~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~--~~~~el~~~l 234 (240)
T 3smv_A 157 NFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF--NSMGEMAEAH 234 (240)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEe--CCHHHHHHHH
Confidence 33344 344444456799999996 9999999999999995432 33447889998 4577777766
Q ss_pred H
Q 012767 320 L 320 (456)
Q Consensus 320 ~ 320 (456)
.
T Consensus 235 ~ 235 (240)
T 3smv_A 235 K 235 (240)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.06 E-value=7.6e-06 Score=73.91 Aligned_cols=121 Identities=11% Similarity=0.116 Sum_probs=80.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.+ ++.|++. +++.++|+.....+..+.+.+|+.... ..++.+++. ....-.|+
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 132 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF--KGIFSAESV-----------------KEYKPSPK 132 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTCHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC--cEEEehhhc-----------------CCCCCCHH
Confidence 45789999 9999999 999999999988888888899874211 111111100 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec----cccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA----DATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~----~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
--..+++.+. ...++|+||+.||+.|.+.|+++.++- +..+.....+|+++ +++..+..++.
T Consensus 133 ~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 198 (201)
T 2w43_A 133 VYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIV--NDFKELYEWIL 198 (201)
T ss_dssp HHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEE--CCHHHHHHHHH
Confidence 2234445555 567999999999999999999997762 22223345688887 44777666553
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.04 E-value=4.4e-06 Score=79.40 Aligned_cols=67 Identities=25% Similarity=0.307 Sum_probs=56.7
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
..|...++.+.++ ...|+++||+.||.+|++.|++|++|+++.+..+..||+++.+++-.++..+++
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 3677777666543 356999999999999999999999999999999999999998877777888775
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.04 E-value=1e-05 Score=73.10 Aligned_cols=137 Identities=15% Similarity=0.105 Sum_probs=90.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcH---HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQL---AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 250 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~---~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~ 250 (456)
-++.|++.++++.|++.|+++.++|+... ..+..+.+.+|+.... ..++...+... ......
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~-------------~~~~~K 97 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF--DFIYASNSELQ-------------PGKMEK 97 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE--EEEEECCTTSS-------------TTCCCT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe--EEEEEcccccc-------------ccCCCC
Confidence 35789999999999999999999998776 7888888999985311 11111110000 000112
Q ss_pred cCchhHHHHHHHHhhcCCEEEEecCC-CCchhhhhhcCeeEEec-cccH-----HHh-hcccEEeeCCCchHHHHHHHHH
Q 012767 251 VFPEHKYEIVKHLQARNHICGMIGNG-VNDAPALKKADIGIAVA-DATD-----AAR-SAADIVLTEPGLNVIITAVLIS 322 (456)
Q Consensus 251 ~~P~~K~~iV~~lq~~g~~v~~iGDG-~ND~~aLk~AdvGIa~~-~~~~-----~a~-~aaDivl~~~~l~~i~~~i~~~ 322 (456)
-.|+--..+++.+.-....++||||+ .+|+.+-+.||+....- .+.. ... ..+|.++...++..+..++.+.
T Consensus 98 P~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~ 177 (189)
T 3ib6_A 98 PDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLL 177 (189)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHH
Confidence 22333344555555556679999999 79999999999975543 2221 111 2678888766899999998876
Q ss_pred HHH
Q 012767 323 RAI 325 (456)
Q Consensus 323 R~i 325 (456)
+.-
T Consensus 178 ~~~ 180 (189)
T 3ib6_A 178 KKI 180 (189)
T ss_dssp HHH
T ss_pred HHh
Confidence 653
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.03 E-value=1e-05 Score=72.92 Aligned_cols=87 Identities=11% Similarity=0.109 Sum_probs=65.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc-HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccc--c
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG--V 251 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~-~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~--~ 251 (456)
++.|++.++|+.|++.|+++.++||.. ...+..+.+.+|+... |.. +
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~------------------------------f~~~~~ 117 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRY------------------------------FVHREI 117 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTT------------------------------EEEEEE
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhh------------------------------cceeEE
Confidence 578999999999999999999999998 6889999999998521 111 1
Q ss_pred CchhHHH----HHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE
Q 012767 252 FPEHKYE----IVKHLQARNHICGMIGNGVNDAPALKKADIGIA 291 (456)
Q Consensus 252 ~P~~K~~----iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa 291 (456)
.+..|.. +.+.+.-....++||||+.+|+.+.+.|++...
T Consensus 118 ~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 118 YPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp SSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred EeCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 2223333 333333334569999999999999999998644
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.03 E-value=8.9e-06 Score=72.36 Aligned_cols=107 Identities=11% Similarity=0.038 Sum_probs=69.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchh
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 255 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 255 (456)
+.|++.+.++.|++.|+++.++|+... .+....+.+|+.... ..++.+.+. ....-.|+-
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f--~~~~~~~~~-----------------~~~kp~~~~ 142 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF--TEVVTSSSG-----------------FKRKPNPES 142 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE--EEEECGGGC-----------------CCCTTSCHH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe--eeeeecccc-----------------CCCCCCHHH
Confidence 678999999999999999999998764 566777777774210 001111000 000111222
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhccc
Q 012767 256 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD 304 (456)
Q Consensus 256 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaD 304 (456)
-..+++.+.-. .|+++||+.||++|++.|++++++.+.....++..+
T Consensus 143 ~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 143 MLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 23334444333 799999999999999999999888766666655543
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.99 E-value=7.5e-06 Score=77.68 Aligned_cols=123 Identities=15% Similarity=0.220 Sum_probs=83.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchh
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 255 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 255 (456)
+.|++.++++.|++.|+++.++|+.... ...+.+.+|+.... ..++.+. + .....-.|+-
T Consensus 107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f--~~~~~~~------------~-----~~~~Kp~~~~ 166 (263)
T 3k1z_A 107 VLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF--DFVLTSE------------A-----AGWPKPDPRI 166 (263)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC--SCEEEHH------------H-----HSSCTTSHHH
T ss_pred ECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh--hEEEeec------------c-----cCCCCCCHHH
Confidence 5789999999999999999999987664 57777888874211 0111100 0 0011222333
Q ss_pred HHHHHHHHhhcCCEEEEecCCC-CchhhhhhcCeeEEeccccHH------HhhcccEEeeCCCchHHHHHHH
Q 012767 256 KYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAVADATDA------ARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 256 K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvGIa~~~~~~~------a~~aaDivl~~~~l~~i~~~i~ 320 (456)
-..+++.+.-....|+||||+. ||+.|.+.||+++++.+.... ....+|+++ +++..+..++.
T Consensus 167 ~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~--~~l~el~~~l~ 236 (263)
T 3k1z_A 167 FQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHIL--PSLAHLLPALD 236 (263)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEE--SSGGGHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEe--CCHHHHHHHHH
Confidence 3445555655567799999997 999999999999998743322 223688888 55888877765
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.97 E-value=9.2e-06 Score=74.27 Aligned_cols=115 Identities=11% Similarity=0.110 Sum_probs=77.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++ |+++.++|+.....+..+.+.+|+.... ..++. +...+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f--~~i~~-----------------------~~~~~K 137 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF--DGIYG-----------------------SSPEAP 137 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEE-----------------------ECSSCC
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe--eeeec-----------------------CCCCCC
Confidence 467899999999999 9999999999888888888888885211 11111 111112
Q ss_pred hHHHHHH----HHhhcCCEEEEecCCCCchhhhhhcCe---eEEeccc-cHHHh-hcccEEeeCCCchHHHH
Q 012767 255 HKYEIVK----HLQARNHICGMIGNGVNDAPALKKADI---GIAVADA-TDAAR-SAADIVLTEPGLNVIIT 317 (456)
Q Consensus 255 ~K~~iV~----~lq~~g~~v~~iGDG~ND~~aLk~Adv---GIa~~~~-~~~a~-~aaDivl~~~~l~~i~~ 317 (456)
.|.++.+ .+.-....|+||||+.||+.|.++||+ +++.+.+ .+..+ ..+|+++.+ +..+..
T Consensus 138 p~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~--~~el~~ 207 (210)
T 2ah5_A 138 HKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLA 207 (210)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHH
T ss_pred CChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHH
Confidence 2333433 333334569999999999999999998 5555544 23333 358988854 555544
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.92 E-value=4.3e-05 Score=71.43 Aligned_cols=117 Identities=16% Similarity=0.098 Sum_probs=79.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccC--
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF-- 252 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~-- 252 (456)
++.|++.++++.|+ .|+++.++|+.....+....+.+|+.... . .+++.-.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-------------------------~i~~~~kp~ 164 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF-P-------------------------RIEVVSEKD 164 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC-C-------------------------CEEEESCCS
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC-c-------------------------eeeeeCCCC
Confidence 45799999999999 99999999999988888888888874211 0 0111111
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCC-CchhhhhhcCeeEEec-cccH--------HHhhcccE-EeeCCCchHHHHHHH
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAVA-DATD--------AARSAADI-VLTEPGLNVIITAVL 320 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvGIa~~-~~~~--------~a~~aaDi-vl~~~~l~~i~~~i~ 320 (456)
|+--..+++.+.-....|++|||+. ||+.|.+.|++++++- .+.. .....+|+ ++ +++..+..++.
T Consensus 165 ~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 165 PQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred HHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 2222344455554456799999999 9999999999998764 2211 11245786 66 55777776664
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.87 E-value=5.2e-06 Score=79.87 Aligned_cols=71 Identities=20% Similarity=0.149 Sum_probs=37.4
Q ss_pred ccCch--hHHHHHHHHhhc-----CCE--EEEecCCCCchhhhhhcCeeEEecccc---HHHhhc--cc-EEeeCCCchH
Q 012767 250 GVFPE--HKYEIVKHLQAR-----NHI--CGMIGNGVNDAPALKKADIGIAVADAT---DAARSA--AD-IVLTEPGLNV 314 (456)
Q Consensus 250 ~~~P~--~K~~iV~~lq~~-----g~~--v~~iGDG~ND~~aLk~AdvGIa~~~~~---~~a~~a--aD-ivl~~~~l~~ 314 (456)
++.|. .|...++.+.+. ... ++++||+.||.+|++.|++||+|+++. +..++. || +++.+++-.+
T Consensus 182 eI~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dG 261 (275)
T 1xvi_A 182 HVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEG 261 (275)
T ss_dssp EEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC------------------------
T ss_pred EEecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchH
Confidence 44553 577777666543 235 999999999999999999999999987 555543 78 8888888888
Q ss_pred HHHHHH
Q 012767 315 IITAVL 320 (456)
Q Consensus 315 i~~~i~ 320 (456)
+..+|+
T Consensus 262 Va~~l~ 267 (275)
T 1xvi_A 262 WREGLD 267 (275)
T ss_dssp ------
T ss_pred HHHHHH
Confidence 888776
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.80 E-value=5.6e-06 Score=78.36 Aligned_cols=56 Identities=20% Similarity=0.163 Sum_probs=46.3
Q ss_pred hhHHHHHHHHhhc-----CCEEEEecCCCCchhhhhhcCeeEEecccc-HHHhhcccEEeeC
Q 012767 254 EHKYEIVKHLQAR-----NHICGMIGNGVNDAPALKKADIGIAVADAT-DAARSAADIVLTE 309 (456)
Q Consensus 254 ~~K~~iV~~lq~~-----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~-~~a~~aaDivl~~ 309 (456)
..|...++.+.+. ...|+++||+.||.+||+.|++||+|+++. +..++.||+|+.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 4588777777644 356999999999999999999999999988 6688888887643
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.73 E-value=4.5e-05 Score=68.48 Aligned_cols=100 Identities=12% Similarity=0.093 Sum_probs=69.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.| ++.++|+........+.+.+|+.... ..++.+. ++ ....-.|+
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f--~~~~~~~------------~~-----~~~Kp~~~ 145 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL--LAFFTSS------------AL-----GVMKPNPA 145 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC--SCEEEHH------------HH-----SCCTTCHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc--ceEEeec------------cc-----CCCCCCHH
Confidence 36799999999999999 99999999998888888888874211 0111100 00 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEecc
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD 294 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~ 294 (456)
--..+++.+.-....|+|+||+.||+.|.+.|++...+-+
T Consensus 146 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~ 185 (200)
T 3cnh_A 146 MYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCV 185 (200)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred HHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEEC
Confidence 2234455555445679999999999999999999887753
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.69 E-value=1.2e-05 Score=72.89 Aligned_cols=102 Identities=6% Similarity=0.035 Sum_probs=67.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH------hCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR------LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 248 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~------lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ 248 (456)
++.|++.++++.|++ |+++.++|+........+.+. +|+... + ..++.+. ++ ..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~-f-~~~~~~~------------~~-----~~ 148 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSF-F-DKVYASC------------QM-----GK 148 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGG-S-SEEEEHH------------HH-----TC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHH-c-CeEEeec------------cc-----CC
Confidence 467899999999999 999999999888777766655 454311 0 0011000 00 01
Q ss_pred cccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEecccc
Q 012767 249 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADAT 296 (456)
Q Consensus 249 a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~ 296 (456)
..-.|+--..+++.+.-....|+++||+.||+.|.+.|+++.++.++.
T Consensus 149 ~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 149 YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 111222223445555545567999999999999999999999887544
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00021 Score=64.97 Aligned_cols=124 Identities=17% Similarity=0.123 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+....+.+|+..-. ..++.+++ .....-.|+
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f--d~~~~~~~-----------------~~~~KP~p~ 144 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF--DVMVFGDQ-----------------VKNGKPDPE 144 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECGGG-----------------SSSCTTSTH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc--cccccccc-----------------cCCCcccHH
Confidence 35789999999999999999999999999999999999985311 11111100 011122233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE--e--c-cccHHHhhcccEEeeCCCchHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA--V--A-DATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa--~--~-~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
-=..+++.+.-....|+||||..+|+.+-+.||+... + + +..+...++.+.++.+ ...++..+
T Consensus 145 ~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~--~~eli~~l 212 (216)
T 3kbb_A 145 IYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVK--PEEILNVL 212 (216)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEEC--GGGHHHHH
T ss_pred HHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECC--HHHHHHHH
Confidence 3344556665556779999999999999999998532 3 2 2334444444434433 34455444
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00019 Score=68.08 Aligned_cols=123 Identities=10% Similarity=0.117 Sum_probs=81.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++ |+++.++|+.....+..+.+.+|+..-. ..++.+.+. ....-.|+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~KP~p~ 180 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQ-----------------KEEKPAPS 180 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGS-----------------SSCTTCHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh--heEEecCCC-----------------CCCCCCHH
Confidence 467999999999997 6999999999998888888999985311 111111100 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCC-CCchhhhhhcCe--eEEeccccH---HHhhcccEEeeCCCchHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNG-VNDAPALKKADI--GIAVADATD---AARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG-~ND~~aLk~Adv--GIa~~~~~~---~a~~aaDivl~~~~l~~i~~~i 319 (456)
--..+++.+.-....++||||+ .||+.+-+.|++ .|.+..+.. .....+|+++. ++..+..++
T Consensus 181 ~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~--~~~el~~~l 249 (260)
T 2gfh_A 181 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALL 249 (260)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEEC--CHHHHHHHH
Confidence 2234445555445679999995 999999999999 677764321 12345788874 477776655
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00036 Score=63.49 Aligned_cols=95 Identities=11% Similarity=0.045 Sum_probs=61.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++||.....+..+.. . +...++.+++. ....-.|+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~----~~d~v~~~~~~-----------------~~~KP~p~ 91 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---P----VNDWMIAAPRP-----------------TAGWPQPD 91 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---T----TTTTCEECCCC-----------------SSCTTSTH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---c----cCCEEEECCcC-----------------CCCCCChH
Confidence 567999999999999999999999998877644432 1 11122222110 01122222
Q ss_pred hHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCe-eEEec
Q 012767 255 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADI-GIAVA 293 (456)
Q Consensus 255 ~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~Adv-GIa~~ 293 (456)
-=....+.+.-. ...++||||..+|+.+-+.|++ .|++.
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~ 132 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc
Confidence 223344444433 2569999999999999999997 45554
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=3.5e-05 Score=73.39 Aligned_cols=63 Identities=25% Similarity=0.361 Sum_probs=50.8
Q ss_pred cccCc--hhHHHHHHHH-hhcCCEEEEecC----CCCchhhhhhcC-eeEEeccccHHHhhcccEEeeCCC
Q 012767 249 AGVFP--EHKYEIVKHL-QARNHICGMIGN----GVNDAPALKKAD-IGIAVADATDAARSAADIVLTEPG 311 (456)
Q Consensus 249 a~~~P--~~K~~iV~~l-q~~g~~v~~iGD----G~ND~~aLk~Ad-vGIa~~~~~~~a~~aaDivl~~~~ 311 (456)
.++.| ..|...++.| .-....|+++|| +.||.+||+.|+ +|++|+|+.+..++.||+|+.+++
T Consensus 189 leI~~~~vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 189 FDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETA 259 (262)
T ss_dssp EEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC-
T ss_pred EEEecCCCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCc
Confidence 34555 3588888888 112457999999 999999999999 699999999999999999876544
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.51 E-value=5e-05 Score=70.04 Aligned_cols=108 Identities=16% Similarity=-0.000 Sum_probs=65.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCCh
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 238 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~---------------~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~ 238 (456)
.++.|++.++|+.|++.|+++.++|+... ..+..+.+.+|+.- ..........+..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~---~~~~~~~~~~~g~~~---- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFV---DMVLACAYHEAGVGP---- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCC---SEEEEECCCTTCCST----
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCce---eeEEEeecCCCCcee----
Confidence 46789999999999999999999999887 57777888888741 110101000000000
Q ss_pred HHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 239 DELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 239 ~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
+. .....+..-.|.-=..+.+.+.-....++||||+.||+.+.+.|++..
T Consensus 128 -~~-~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 -LA-IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp -TC-CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred -ec-ccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 00 000001111122112334444434467999999999999999999864
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00018 Score=65.67 Aligned_cols=118 Identities=18% Similarity=0.229 Sum_probs=73.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++. +++.++|+.... .+.+|+... + ..++.+ +++ ....-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~-f-~~~~~~------------~~~-----~~~kp~~~ 159 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADY-F-AFALCA------------EDL-----GIGKPDPA 159 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGG-C-SEEEEH------------HHH-----TCCTTSHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHH-e-eeeEEc------------ccc-----CCCCcCHH
Confidence 4678999999999988 999999987654 233444210 0 000000 000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCC-CchhhhhhcCeeEEec----cccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAVA----DATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvGIa~~----~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
--..+.+.+.-....|+||||+. ||+.|.+.||++.++- +..+. ...+|+++ +++..+..++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l~ 227 (230)
T 3vay_A 160 PFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEI--HNLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeE--CCHHHHHHHHH
Confidence 22344455544456799999998 9999999999998873 22222 56789888 45888877664
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.44 E-value=8.3e-05 Score=62.37 Aligned_cols=98 Identities=11% Similarity=0.081 Sum_probs=65.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+. + .....-.|+
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~------------~-----~~~~Kp~~~ 78 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV--DKVLLSG------------E-----LGVEKPEEA 78 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS--SEEEEHH------------H-----HSCCTTSHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc--cEEEEec------------c-----CCCCCCCHH
Confidence 46689999999999999999999999888877777888764211 1111100 0 001111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 291 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa 291 (456)
--..+.+.+.-....++||||+.+|+.+.+.+++...
T Consensus 79 ~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i 115 (137)
T 2pr7_A 79 AFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGV 115 (137)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEE
Confidence 2233444444444579999999999999999997433
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.39 E-value=1.4e-05 Score=72.05 Aligned_cols=105 Identities=5% Similarity=-0.013 Sum_probs=63.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-hCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~-lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
++.|++.++++.|++.|+++.++|+........+... +|+... + ..++.+ ++. ....-.|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~-f-~~~~~~------------~~~-----~~~Kp~~ 151 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA-A-DHIYLS------------QDL-----GMRKPEA 151 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH-C-SEEEEH------------HHH-----TCCTTCH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh-e-eeEEEe------------ccc-----CCCCCCH
Confidence 4579999999999999999999998664432222211 222100 0 000000 000 0111122
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHH
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDA 298 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ 298 (456)
+--..+++.+.-....++++||+.||+.|.+.||+...+.+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~ 196 (206)
T 2b0c_A 152 RIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTT 196 (206)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTTH
T ss_pred HHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCch
Confidence 233345555555556799999999999999999998877654433
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0005 Score=69.45 Aligned_cols=137 Identities=13% Similarity=0.114 Sum_probs=81.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC-CccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP-SSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~-~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+... ++ ..++.+++....- +..........-.|
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~-Fd~~~Ivs~ddv~~~~------~~~~~~kp~~KP~P 287 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPY-FEADFIATASDVLEAE------NMYPQARPLGKPNP 287 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGG-SCGGGEECHHHHHHHH------HHSTTSCCCCTTST
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHh-cCCCEEEecccccccc------cccccccCCCCCCH
Confidence 5779999999999999999999999999999888899998532 11 1233322111000 00000000011111
Q ss_pred hhHHHHHHHHh--------------hcCCEEEEecCCCCchhhhhhcCee-EEecccc------HHH-hhcccEEeeCCC
Q 012767 254 EHKYEIVKHLQ--------------ARNHICGMIGNGVNDAPALKKADIG-IAVADAT------DAA-RSAADIVLTEPG 311 (456)
Q Consensus 254 ~~K~~iV~~lq--------------~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~~------~~a-~~aaDivl~~~~ 311 (456)
+-=..+.+.+. -....|+||||+.+|+.+-++||+. |++..+. +.. ...+|+++ ++
T Consensus 288 ~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi--~s 365 (384)
T 1qyi_A 288 FSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NH 365 (384)
T ss_dssp HHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SS
T ss_pred HHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEE--CC
Confidence 11111222222 1235699999999999999999986 4444321 122 24689888 45
Q ss_pred chHHHHHHH
Q 012767 312 LNVIITAVL 320 (456)
Q Consensus 312 l~~i~~~i~ 320 (456)
+..+..++.
T Consensus 366 l~eL~~~l~ 374 (384)
T 1qyi_A 366 LGELRGVLD 374 (384)
T ss_dssp GGGHHHHHS
T ss_pred HHHHHHHHH
Confidence 777776653
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.36 E-value=3.5e-05 Score=72.53 Aligned_cols=57 Identities=23% Similarity=0.381 Sum_probs=44.8
Q ss_pred ccCch--hHHHHHHHH-hhcCCEEEEecC----CCCchhhhhhcCe-eEEeccccHHHhhcccEE
Q 012767 250 GVFPE--HKYEIVKHL-QARNHICGMIGN----GVNDAPALKKADI-GIAVADATDAARSAADIV 306 (456)
Q Consensus 250 ~~~P~--~K~~iV~~l-q~~g~~v~~iGD----G~ND~~aLk~Adv-GIa~~~~~~~a~~aaDiv 306 (456)
++.|. +|...++.| .-....|+++|| |.||.+||+.|+. |++|+|+.+..++.||+|
T Consensus 181 eI~~~~~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 181 DVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp EEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred EEecCCCchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence 44443 577777777 112467999999 9999999999988 999999999999999976
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00074 Score=63.76 Aligned_cols=42 Identities=12% Similarity=0.135 Sum_probs=34.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHhCCC
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITG---DQLAIAKETGRRLGMG 215 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTG---D~~~~a~~ia~~lGi~ 215 (456)
+.+-++++++|++|++.|++|+++|| ............+|+.
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 33447899999999999999999988 6666667777788875
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00019 Score=66.05 Aligned_cols=106 Identities=8% Similarity=-0.035 Sum_probs=68.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH------hCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR------LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 248 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~------lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ 248 (456)
++.|++.++++.|++. +++.++|+........+.+. +|+... + ..++.+ ++ ...
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~-f-d~i~~~------------~~-----~~~ 171 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY-F-EKTYLS------------YE-----MKM 171 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH-C-SEEEEH------------HH-----HTC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh-C-CEEEee------------cc-----cCC
Confidence 3669999999999998 99999999998887766643 333110 0 000000 00 001
Q ss_pred cccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHh
Q 012767 249 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 300 (456)
Q Consensus 249 a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~ 300 (456)
..-.|+--..+++.+.-....|+||||+.||+.|.+.||++.++.++.+..+
T Consensus 172 ~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k 223 (229)
T 4dcc_A 172 AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWS 223 (229)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGG
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 1222233334555555556779999999999999999999988876544333
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00038 Score=65.80 Aligned_cols=43 Identities=21% Similarity=0.334 Sum_probs=35.1
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHhCCC
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITG---DQLAIAKETGRRLGMG 215 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTG---D~~~~a~~ia~~lGi~ 215 (456)
.+.+-|++.++|++|++.|++|+++|| ..........+.+|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 444568899999999999999999999 5666666666778875
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00082 Score=63.00 Aligned_cols=116 Identities=14% Similarity=0.145 Sum_probs=76.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.+.++.|++.|+++.+.|+.. .+..+-+.+|+.... ..++.+++. ....-.|+
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~F--d~i~~~~~~-----------------~~~KP~p~ 174 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKF--DFIADAGKC-----------------KNNKPHPE 174 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGC--SEECCGGGC-----------------CSCTTSSH
T ss_pred ccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccccc--ceeeccccc-----------------CCCCCcHH
Confidence 467999999999999999998877654 345667888885321 112221110 11222344
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe-eEEeccccHHHhhcccEEeeCCCchHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADATDAARSAADIVLTEPGLNVI 315 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~~~~~a~~aaDivl~~~~l~~i 315 (456)
-=..+++.+.-....|+||||..+|+.+-+.||+ .|++++..+ ...||+++.+ +..+
T Consensus 175 ~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~--~~~ad~vi~~--l~eL 232 (250)
T 4gib_A 175 IFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYEN--LKKANLVVDS--TNQL 232 (250)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTT--TTTSSEEESS--GGGC
T ss_pred HHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhH--hccCCEEECC--hHhC
Confidence 3445666666566779999999999999999998 566654332 3458998844 5554
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00089 Score=63.82 Aligned_cols=85 Identities=15% Similarity=0.066 Sum_probs=63.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcH----HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccc
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQL----AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 248 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~----~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ 248 (456)
..++.|++.+.++.|++.|+++.++||... ..+..-.+.+||..-... .++
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~-------------------------~Li 153 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDK-------------------------TLL 153 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTT-------------------------TEE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccc-------------------------eeE
Confidence 356789999999999999999999999865 477777788999631000 012
Q ss_pred cccCchhHHHHHHHHhhc-CCEEEEecCCCCchhh
Q 012767 249 AGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPA 282 (456)
Q Consensus 249 a~~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~a 282 (456)
-+-....|....+.+.+. ..+|+++||..+|.++
T Consensus 154 lr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 154 LKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp EESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred ecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 122236688888888874 5578999999999986
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0033 Score=58.55 Aligned_cols=40 Identities=28% Similarity=0.260 Sum_probs=34.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHhCCC
Q 012767 176 PIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 215 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miT---GD~~~~a~~ia~~lGi~ 215 (456)
+-+.+.++++.+++.|+++.++| |............+|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 55788999999999999999999 98888877777787775
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0013 Score=60.16 Aligned_cols=95 Identities=9% Similarity=0.005 Sum_probs=60.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+... .+..+.+.+|+.... ..++.+++. ....-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~ 154 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYF--DALALSYEI-----------------KAVKPNPK 154 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGC--SEEC----------------------------CC
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHe--eEEEecccc-----------------CCCCCCHH
Confidence 3579999999999999999999999866 467788888875211 111111100 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCC-chhhhhhcCeeEEe
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVN-DAPALKKADIGIAV 292 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~N-D~~aLk~AdvGIa~ 292 (456)
--..+++.+.-. . +||||+.+ |+.+-+.||+....
T Consensus 155 ~~~~~~~~~~~~--~-~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 155 IFGFALAKVGYP--A-VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp HHHHHHHHHCSS--E-EEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHHHHHHHcCCC--e-EEEcCCchHhHHHHHHCCCeEEE
Confidence 222334444322 2 99999998 99999999998654
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0023 Score=60.29 Aligned_cols=42 Identities=14% Similarity=0.035 Sum_probs=36.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHhCCC
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 215 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miT---GD~~~~a~~ia~~lGi~ 215 (456)
.++-+++.++|+.|++.|++++++| |..........+.+|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5566889999999999999999999 88888877777888875
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.00058 Score=60.89 Aligned_cols=104 Identities=9% Similarity=0.026 Sum_probs=62.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC---------------cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChH
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 239 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD---------------~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 239 (456)
++.|++.++|+.|++.|+++.++|+- ....+..+.+.+|+. +...++.+....+..
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~~------ 112 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADEC------ 112 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGCC------
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCcccc------
Confidence 57799999999999999999999997 456677788888875 211111110000000
Q ss_pred HHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee-EEecc
Q 012767 240 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD 294 (456)
Q Consensus 240 ~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~ 294 (456)
....-.|+-=..+++.+.-....++||||+.+|+.+-+.|++. |.+..
T Consensus 113 -------~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~ 161 (176)
T 2fpr_A 113 -------DCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDR 161 (176)
T ss_dssp -------SSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBT
T ss_pred -------cccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcC
Confidence 0000111110112233333345689999999999999999986 34433
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0011 Score=63.31 Aligned_cols=85 Identities=14% Similarity=0.046 Sum_probs=62.2
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcH----HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccc
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQL----AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 248 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~----~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ 248 (456)
..++.|++.+.++.|++.|+++.++||... ..+..-.+.+||..-.. . .++
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~-~------------------------~Li 153 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE-S------------------------AFY 153 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG-G------------------------GEE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc-c------------------------cee
Confidence 456789999999999999999999999865 46677778899963100 0 012
Q ss_pred cccCchhHHHHHHHHhhc-CCEEEEecCCCCchhh
Q 012767 249 AGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPA 282 (456)
Q Consensus 249 a~~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~a 282 (456)
-+-....|....+.+.+. ..+|+++||..+|.++
T Consensus 154 lr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 154 LKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp EESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred ccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 122235677777778777 4568999999999985
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0022 Score=58.99 Aligned_cols=114 Identities=11% Similarity=0.124 Sum_probs=72.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.| ++.++|+.....+..+.+.+|+.... .+ .+. ...
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f------~~-------------------~~~---~~~ 146 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEV------EG-------------------RVL---IYI 146 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHT------TT-------------------CEE---EES
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhc------Ce-------------------eEE---ecC
Confidence 57899999999999999 99999999988888888888874110 00 000 112
Q ss_pred hHHHHHHHHh--hcCCEEEEecCCCC---chhhhhhcCee-EEeccc----c-HHHhh--cccEEeeCCCchHHHHHH
Q 012767 255 HKYEIVKHLQ--ARNHICGMIGNGVN---DAPALKKADIG-IAVADA----T-DAARS--AADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~iV~~lq--~~g~~v~~iGDG~N---D~~aLk~AdvG-Ia~~~~----~-~~a~~--aaDivl~~~~l~~i~~~i 319 (456)
.|..+++.+. -....|+||||+.| |+.+-+.||+. |.+..+ . +.... .+|+++. ++..+..++
T Consensus 147 ~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~--~~~el~~~l 222 (231)
T 2p11_A 147 HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVE--RIGDLVEMD 222 (231)
T ss_dssp SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEES--SGGGGGGCG
T ss_pred ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeec--CHHHHHHHH
Confidence 2322333332 23567999999999 66666778865 334332 2 22333 3888884 466554433
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0024 Score=61.60 Aligned_cols=97 Identities=11% Similarity=-0.013 Sum_probs=66.7
Q ss_pred cCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHH---HHHHHH--------hCCCCCCCCCccccCCchhhhhhcCChHH
Q 012767 172 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIA---KETGRR--------LGMGTNMYPSSALSGQDRDESIVALPVDE 240 (456)
Q Consensus 172 l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a---~~ia~~--------lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 240 (456)
.++++.|++.++++.|++.|+++.++||.....+ ...-+. .|+. + ..++.+++.
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~---~-~~~~~~~~~----------- 249 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP---L-VMQCQREQG----------- 249 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC---C-SEEEECCTT-----------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC---c-hheeeccCC-----------
Confidence 4678899999999999999999999999885432 333344 6772 1 111211110
Q ss_pred HHhhcccccccCchhHHHHHHHHhhcC-CEEEEecCCCCchhhhhhcCeeE
Q 012767 241 LIEKADGFAGVFPEHKYEIVKHLQARN-HICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 241 ~~~~~~v~a~~~P~~K~~iV~~lq~~g-~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
..+-.|+-|..+.+.+.... ..++|+||..+|+.|-+.|++-.
T Consensus 250 -------~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 250 -------DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp -------CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred -------CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeE
Confidence 01233566777777775443 34689999999999999999853
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.00072 Score=63.83 Aligned_cols=58 Identities=22% Similarity=0.265 Sum_probs=46.9
Q ss_pred ccccCch--hHHHHHHHHhhcCCEEEEecC----CCCchhhhhhcC-eeEEeccccHHHhhcccE
Q 012767 248 FAGVFPE--HKYEIVKHLQARNHICGMIGN----GVNDAPALKKAD-IGIAVADATDAARSAADI 305 (456)
Q Consensus 248 ~a~~~P~--~K~~iV~~lq~~g~~v~~iGD----G~ND~~aLk~Ad-vGIa~~~~~~~a~~aaDi 305 (456)
+-++.|. +|...++.|.+....|+++|| |.||.+||+.|+ +|++|+++.+..+...++
T Consensus 178 ~leI~~~gv~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~~ 242 (246)
T 3f9r_A 178 SFDVFPVGWDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEKI 242 (246)
T ss_dssp EEEEEETTCSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHHH
T ss_pred EEEEEeCCCCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHHH
Confidence 3455553 688888888776678999999 799999999996 899999998888776543
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0061 Score=55.68 Aligned_cols=55 Identities=11% Similarity=0.071 Sum_probs=37.1
Q ss_pred hHHHHHHHHhh----cCCEEEEecCC-CCchhhhhhcCeeEEe---cccc-HHHh---hcccEEeeC
Q 012767 255 HKYEIVKHLQA----RNHICGMIGNG-VNDAPALKKADIGIAV---ADAT-DAAR---SAADIVLTE 309 (456)
Q Consensus 255 ~K~~iV~~lq~----~g~~v~~iGDG-~ND~~aLk~AdvGIa~---~~~~-~~a~---~aaDivl~~ 309 (456)
.|...++.+.+ ....|+|+||+ .||+.|++.|++++++ +.+. +..+ ..+|+++.+
T Consensus 177 pk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~ 243 (250)
T 2c4n_A 177 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp TSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred CCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECC
Confidence 34555544433 34579999999 6999999999999654 3333 3333 468888743
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0072 Score=57.48 Aligned_cols=42 Identities=14% Similarity=0.207 Sum_probs=34.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcH---HHHHHHHHHhCCC
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQL---AIAKETGRRLGMG 215 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~---~~a~~ia~~lGi~ 215 (456)
.++.|++.++|+.|++.|+++.++||... ..+...-+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 45779999999999999999999999883 4444555777885
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0085 Score=56.41 Aligned_cols=41 Identities=17% Similarity=0.131 Sum_probs=35.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHhCCCC
Q 012767 175 PPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMGT 216 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miT---GD~~~~a~~ia~~lGi~~ 216 (456)
++ |++.++|++++++|++|+++| |..........+.+|+..
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 45 899999999999999999999 777777777788888753
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=95.87 E-value=0.0092 Score=56.42 Aligned_cols=95 Identities=13% Similarity=0.064 Sum_probs=63.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh---CCCCCCCCCccccCCchhhhhhcCChHHHHhhccccccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL---GMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 251 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~l---Gi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~ 251 (456)
++.|++.++++.|++.|+++.++|+.....+..+-+.+ |+... + ..++.+ ++...-
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~-f-d~i~~~-------------------~~~~KP 188 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL-V-DGHFDT-------------------KIGHKV 188 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG-C-SEEECG-------------------GGCCTT
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhh-c-cEEEec-------------------CCCCCC
Confidence 57899999999999999999999999888777666543 34311 0 011110 000111
Q ss_pred CchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 252 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 252 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
.|+-=..+++.+.-....|+||||..+|+.+-++||+-.
T Consensus 189 ~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~ 227 (261)
T 1yns_A 189 ESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHV 227 (261)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEE
Confidence 122223445555555567999999999999999999853
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.69 E-value=0.0074 Score=59.48 Aligned_cols=119 Identities=12% Similarity=0.063 Sum_probs=69.0
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchh--------------hhhhcCCh
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRD--------------ESIVALPV 238 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~--------------~~~~~~~~ 238 (456)
...+.|+..+.++.+++.|++|+|+||-....+..+|..++..-++ |...+.|.... +.....-.
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygI-p~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~ 219 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNA-KPENVIGVTTLLKNRKTGELTTARKQIAEGKYD 219 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCC-CGGGEEEECEEEECTTTCCEECHHHHHHTTCCC
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCC-CHHHeEeeeeeeecccccccccccccccccccc
Confidence 3356799999999999999999999999999999999886322111 11122221100 00000000
Q ss_pred HHHHhhccc-----ccccCchhHHHHHHHHhhc-CCEEEEecCCC-Cchhhhhh--cCeeEEe
Q 012767 239 DELIEKADG-----FAGVFPEHKYEIVKHLQAR-NHICGMIGNGV-NDAPALKK--ADIGIAV 292 (456)
Q Consensus 239 ~~~~~~~~v-----~a~~~P~~K~~iV~~lq~~-g~~v~~iGDG~-ND~~aLk~--AdvGIa~ 292 (456)
......... .-.+.-+.|...|+..-.. +..+++.||+. .|.+||.. ++.|+.+
T Consensus 220 ~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 220 PKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp GGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred ccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 000000000 0011235688777766543 45689999994 79999965 4444443
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.016 Score=53.77 Aligned_cols=109 Identities=10% Similarity=0.050 Sum_probs=70.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.+.++.|++.|+++.++|+... +..+-+.+|+... -..++.+++. ....-.|+
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~--fd~i~~~~~~-----------------~~~KP~p~ 153 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREF--FTFCADASQL-----------------KNSKPDPE 153 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGG--CSEECCGGGC-----------------SSCTTSTH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccc--cccccccccc-----------------cCCCCcHH
Confidence 4679999999999999999999998653 4556677887531 1112211110 01122233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee-EEeccccHHHhhcccEEee
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADATDAARSAADIVLT 308 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~~~~a~~aaDivl~ 308 (456)
-=....+.+.-....|+||||..+|+.+-++||+- |++..+. ..+|.++.
T Consensus 154 ~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~----~~ad~~~~ 204 (243)
T 4g9b_A 154 IFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGL----TGAQLLLP 204 (243)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTC----CSCSEEES
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC----CcHHHhcC
Confidence 22345566665667899999999999999999974 4454432 34566553
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=95.17 E-value=0.031 Score=53.79 Aligned_cols=43 Identities=16% Similarity=0.180 Sum_probs=34.5
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHhCCC
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 215 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miT---GD~~~~a~~ia~~lGi~ 215 (456)
.+++-+++.++++.|++.|++++++| |..........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 34566789999999999999999999 56666666666777775
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=94.80 E-value=0.14 Score=47.07 Aligned_cols=43 Identities=16% Similarity=0.216 Sum_probs=30.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHHhCCC
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 215 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miT---GD~~~~a~~ia~~lGi~ 215 (456)
.+++-+++.++++.+++.|+++.++| |.........-..+|+.
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 44455788999999999999999999 55555554444566764
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=94.52 E-value=0.0074 Score=55.37 Aligned_cols=89 Identities=12% Similarity=0.036 Sum_probs=54.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHH----HHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccccc
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKE----TGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 251 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~----ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~ 251 (456)
+.+++.++++.|++.|+++.++|+.....+.. +....+.. +.+..... .....-
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i--------~~~~~~~~--------------~~~~KP 146 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIP--------ATNMNPVI--------------FAGDKP 146 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCC--------TTTBCCCE--------------ECCCCT
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCcc--------ccccchhh--------------hcCCCC
Confidence 56799999999999999999999986543222 22222221 00000000 000112
Q ss_pred CchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 252 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 252 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
.|+-...+++.+ |- ++||||..+|+.+-+.|++..
T Consensus 147 ~p~~~~~~~~~~---g~-~l~VGDs~~Di~aA~~aG~~~ 181 (211)
T 2b82_A 147 GQNTKSQWLQDK---NI-RIFYGDSDNDITAARDVGARG 181 (211)
T ss_dssp TCCCSHHHHHHT---TE-EEEEESSHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHC---CC-EEEEECCHHHHHHHHHCCCeE
Confidence 233333444433 43 999999999999999999853
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=94.35 E-value=0.0023 Score=57.37 Aligned_cols=81 Identities=15% Similarity=0.187 Sum_probs=55.8
Q ss_pred CCCCcchHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccC
Q 012767 174 DPPIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 252 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~-Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~ 252 (456)
-++.|++.++++.|++. |+++.++|+.....+..+.+.+|+. +.+ ++
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~glf-----------------------~~i------~~--- 119 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRWV-----------------------EQH------LG--- 119 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHHH-----------------------HHH------HC---
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCch-----------------------hhh------cC---
Confidence 35789999999999999 9999999998876666666666540 111 11
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCCCc----hhhhh-hcCeeE
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGVND----APALK-KADIGI 290 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~ND----~~aLk-~AdvGI 290 (456)
+ +.++.+.-....++|+||+.+| +.+-+ .|++-.
T Consensus 120 ~----~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~ 158 (193)
T 2i7d_A 120 P----QFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEH 158 (193)
T ss_dssp H----HHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSCSSEE
T ss_pred H----HHHHHcCCCcccEEEECCchhhCcHHHhhcccccccce
Confidence 0 1333333345568999999988 66666 666543
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=94.26 E-value=0.05 Score=55.60 Aligned_cols=98 Identities=6% Similarity=-0.011 Sum_probs=60.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC------cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGD------QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 248 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD------~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ 248 (456)
++.|++.++++.|++.|+++.++|+- ......... .|+... + ..++.+++. ..
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~-f-d~i~~~~~~-----------------~~ 158 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMH-F-DFLIESCQV-----------------GM 158 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTT-S-SEEEEHHHH-----------------TC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhh-e-eEEEecccc-----------------CC
Confidence 57899999999999999999999996 222222211 132210 0 111111100 01
Q ss_pred cccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec
Q 012767 249 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA 293 (456)
Q Consensus 249 a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~ 293 (456)
..-.|+-=..+.+.+.-....|+||||..||+.+.+.|++....-
T Consensus 159 ~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 159 VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred CCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 122223334455555555667999999999999999999987664
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=93.31 E-value=0.11 Score=52.62 Aligned_cols=40 Identities=10% Similarity=0.150 Sum_probs=33.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCc------------HHHHHHHHHHhCCC
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQ------------LAIAKETGRRLGMG 215 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~------------~~~a~~ia~~lGi~ 215 (456)
+-|++.++|+.|++.|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999955 22366777888874
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=92.28 E-value=0.14 Score=48.23 Aligned_cols=93 Identities=12% Similarity=0.068 Sum_probs=58.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh--C---------CCCCCCCCccccCCchhhhhhcCChHHHHh
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL--G---------MGTNMYPSSALSGQDRDESIVALPVDELIE 243 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~l--G---------i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 243 (456)
++.|++.++++. |+++.++|..+...+..+-+.+ | +..- + ...+ +..+.
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~-~-~~~f--------------~~~~~ 184 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSY-I-DGYF--------------DINTS 184 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGG-C-CEEE--------------CHHHH
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhh-c-ceEE--------------eeecc
Confidence 567899988887 9999999999988877776665 3 2100 0 0000 00000
Q ss_pred hcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE
Q 012767 244 KADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 291 (456)
Q Consensus 244 ~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa 291 (456)
-..-.|+-=..+.+.+.-....|+||||..+|+.+-++|++-..
T Consensus 185 ----g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i 228 (253)
T 2g80_A 185 ----GKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATG 228 (253)
T ss_dssp ----CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred ----CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEE
Confidence 01112222234455555555679999999999999999998643
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=91.91 E-value=0.0055 Score=55.15 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=33.0
Q ss_pred CCCcchHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHhCC
Q 012767 175 PPIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGM 214 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~-Gi~v~miTGD~~~~a~~ia~~lGi 214 (456)
++.|++.++++.|++. |+++.++|+-....+..+.+.+|+
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l 115 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAW 115 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhch
Confidence 5789999999999999 999999999877655555555554
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=91.71 E-value=0.39 Score=41.90 Aligned_cols=101 Identities=6% Similarity=-0.016 Sum_probs=58.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC---cHHH---HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGD---QLAI---AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 248 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD---~~~~---a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ 248 (456)
++.|++.++++.|++ ++++.++|+- .... ...+....|... +...++.++
T Consensus 69 ~~~pg~~e~L~~L~~-~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~--~~~~i~~~~--------------------- 124 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNE-HYDIYIATAAMDVPTSFHDKYEWLLEYFPFLD--PQHFVFCGR--------------------- 124 (180)
T ss_dssp CBCTTHHHHHHHHTT-TSEEEEEECC--CCSHHHHHHHHHHHHCTTSC--GGGEEECSC---------------------
T ss_pred CCCcCHHHHHHHHHh-cCCEEEEeCCCCcchHHHHHHHHHHHHcCCCC--cccEEEeCC---------------------
Confidence 578999999999998 5999999997 2111 222333334321 111111111
Q ss_pred cccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHH
Q 012767 249 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 249 a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
+.| + ..+++|||..+++. +.|+-.|++..+... ...++.++ +++..+..++
T Consensus 125 -----~~~------l----~~~l~ieDs~~~i~--~aaG~~i~~~~~~~~-~~~~~~~i--~~~~el~~~l 175 (180)
T 3bwv_A 125 -----KNI------I----LADYLIDDNPKQLE--IFEGKSIMFTASHNV-YEHRFERV--SGWRDVKNYF 175 (180)
T ss_dssp -----GGG------B----CCSEEEESCHHHHH--HCSSEEEEECCGGGT-TCCSSEEE--CSHHHHHHHH
T ss_pred -----cCe------e----cccEEecCCcchHH--HhCCCeEEeCCCccc-CCCCceec--CCHHHHHHHH
Confidence 011 1 45799999999985 567766666533221 13466666 4466666554
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=91.40 E-value=0.36 Score=44.79 Aligned_cols=51 Identities=18% Similarity=0.236 Sum_probs=33.3
Q ss_pred HHHHHhhcCCEEEEecCC-CCchhhhhhcCee-EEec--cccH-HHhh---cccEEeeC
Q 012767 259 IVKHLQARNHICGMIGNG-VNDAPALKKADIG-IAVA--DATD-AARS---AADIVLTE 309 (456)
Q Consensus 259 iV~~lq~~g~~v~~iGDG-~ND~~aLk~AdvG-Ia~~--~~~~-~a~~---aaDivl~~ 309 (456)
+.+.+.-....++||||+ .||+.+.+.|++. |.+. .+.. ..+. .+|+++.+
T Consensus 192 ~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~ 250 (264)
T 1yv9_A 192 AIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDS 250 (264)
T ss_dssp HHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred HHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEec
Confidence 344444345679999999 5999999999987 3343 2221 2222 58888743
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=91.05 E-value=0.086 Score=52.33 Aligned_cols=48 Identities=13% Similarity=0.144 Sum_probs=37.0
Q ss_pred EecccCCCCCcchHHHHHHHHhCCCeEEEEcCCc----HHHHHHHHHHhCCC
Q 012767 168 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQ----LAIAKETGRRLGMG 215 (456)
Q Consensus 168 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~----~~~a~~ia~~lGi~ 215 (456)
|++.-.+.+=|++.++|+.|++.|+++.++|+.. ...+..+.+.+|+.
T Consensus 22 Gvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~ 73 (352)
T 3kc2_A 22 GVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVD 73 (352)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSC
T ss_pred CeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCC
Confidence 3444455666899999999999999999999875 34556666678885
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.37 E-value=0.13 Score=46.63 Aligned_cols=91 Identities=13% Similarity=0.040 Sum_probs=63.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
.+||++.+.++.|++. +++++.|.-....|..+...+++..- + ...+.++ -...
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~-f-~~~l~rd-----------------------~~~~ 121 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGV-F-RARLFRE-----------------------SCVF 121 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSC-E-EEEECGG-----------------------GCEE
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCccc-E-EEEEEcc-----------------------ccee
Confidence 4699999999999998 99999999999999999999998531 1 1111111 1111
Q ss_pred hHHHHHHHHhh---cCCEEEEecCCCCchhhhhhcCeeEE
Q 012767 255 HKYEIVKHLQA---RNHICGMIGNGVNDAPALKKADIGIA 291 (456)
Q Consensus 255 ~K~~iV~~lq~---~g~~v~~iGDG~ND~~aLk~AdvGIa 291 (456)
.|...++.+.. .-..|++++|..++..+-+.+++-|.
T Consensus 122 ~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~ 161 (195)
T 2hhl_A 122 HRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQ 161 (195)
T ss_dssp ETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECC
T ss_pred cCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEe
Confidence 12222333333 23569999999999988777766653
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=89.91 E-value=0.14 Score=45.64 Aligned_cols=90 Identities=13% Similarity=0.046 Sum_probs=62.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
.+||++.+.++.|.+. +++++.|.-....|..+...++... .+ ...+.++ -...
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~-~f-~~~~~rd-----------------------~~~~ 108 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWG-AF-RARLFRE-----------------------SCVF 108 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTC-CE-EEEECGG-----------------------GSEE
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCC-cE-EEEEecc-----------------------Ccee
Confidence 4799999999999997 9999999999999999999998753 11 1111111 0011
Q ss_pred hHHHHHHHHhh---cCCEEEEecCCCCchhhhhhcCeeE
Q 012767 255 HKYEIVKHLQA---RNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 255 ~K~~iV~~lq~---~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
.|...++.+.. .-..|+++||..++..+-..+++-|
T Consensus 109 ~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 109 HRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp ETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred cCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 12222333332 2356999999999998877777765
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=89.49 E-value=0.36 Score=41.36 Aligned_cols=40 Identities=20% Similarity=0.080 Sum_probs=33.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCc---HHHHHHHHHHhCCC
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQ---LAIAKETGRRLGMG 215 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~---~~~a~~ia~~lGi~ 215 (456)
+-|++.++|+.|++.|+.++++||.. ...+....++.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 34789999999999999999999997 45666667778875
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=85.24 E-value=0.8 Score=42.36 Aligned_cols=38 Identities=11% Similarity=0.126 Sum_probs=35.2
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 012767 178 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 215 (456)
Q Consensus 178 ~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~ 215 (456)
+.+.++|++|++.|++++++||.....+..+.+.+|+.
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 20 DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 45999999999999999999999999999999999985
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=84.41 E-value=1.3 Score=41.66 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=36.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 215 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~ 215 (456)
+-+.+.++|++|++.|++++++||.....+..+.+.+|+.
T Consensus 27 ~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 27 DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4467899999999999999999999999999999999985
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=84.26 E-value=3.7 Score=37.87 Aligned_cols=50 Identities=22% Similarity=0.321 Sum_probs=33.7
Q ss_pred cCCEEEEecCCC-CchhhhhhcCee-EEeccc--c-HHHhh---cccEEeeCCCchHHHH
Q 012767 266 RNHICGMIGNGV-NDAPALKKADIG-IAVADA--T-DAARS---AADIVLTEPGLNVIIT 317 (456)
Q Consensus 266 ~g~~v~~iGDG~-ND~~aLk~AdvG-Ia~~~~--~-~~a~~---aaDivl~~~~l~~i~~ 317 (456)
....++||||+. +|+.+-+.|++. |.+..+ . +.... .+|+++. ++..+..
T Consensus 201 ~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~--~l~el~~ 258 (263)
T 1zjj_A 201 PGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLP--SVYELID 258 (263)
T ss_dssp TTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEES--SGGGGGG
T ss_pred CcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEEC--CHHHHHH
Confidence 466899999995 999999999976 445432 1 22222 5788874 4665544
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=80.84 E-value=4.4 Score=42.20 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=33.3
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh-CC
Q 012767 178 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL-GM 214 (456)
Q Consensus 178 ~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~l-Gi 214 (456)
|+.+..+++++++| ++.++|.-+..-+..++..+ |+
T Consensus 249 p~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~ 285 (555)
T 2jc9_A 249 GKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDF 285 (555)
T ss_dssp THHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCS
T ss_pred hHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCC
Confidence 58899999999999 99999999999999999888 75
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 456 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 2e-28 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 6e-26 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 6e-19 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 3e-12 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 6e-09 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 3e-08 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 7e-08 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 9e-08 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-07 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 2e-07 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 5e-07 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 1e-06 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 1e-06 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 2e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 2e-05 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 3e-05 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 4e-05 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 4e-05 | |
| d1s2oa1 | 244 | c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 { | 0.003 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 108 bits (270), Expect = 2e-28
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 165 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM-GTNMYPSSA 223
DPP + +I+ G+ V MITGD A RR+G+ G N +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 224 LSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPAL 283
+ + E +A FA V P HK +IV++LQ+ + I M G+GVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 284 KKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 319
KKA+IGIA+ T A++A+++VL + + I+ AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 106 bits (265), Expect = 6e-26
Identities = 27/331 (8%), Positives = 85/331 (25%), Gaps = 37/331 (11%)
Query: 12 VLCCDKTGTLTLNKLTV-----DKNLIEIFAGGVDAD-------TVVLMAARASQVENLD 59
+ + + + DK L ++ + G++++ + + ++ + +
Sbjct: 41 HIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDE 100
Query: 60 VIDAAIVGMLADP--KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQIL 117
+ + + ++ + L + + + + + ++
Sbjct: 101 IEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH 160
Query: 118 NLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDP-- 175
+ + A+ + + + + K+ + + + G I
Sbjct: 161 VSDATLFSL----KGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTF-KTGYIYQEIILR 215
Query: 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD------- 228
P+ + + G + + TG LG+ + D
Sbjct: 216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENM 275
Query: 229 -RDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD 287
+ P A Y + ++G+ + D + +K
Sbjct: 276 YPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIG 335
Query: 288 I-GIAVA-------DATDAARSAADIVLTEP 310
I A + AD V+
Sbjct: 336 ATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 80.5 bits (198), Expect = 6e-19
Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 31/155 (20%)
Query: 165 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 224
D + ++ +G+ V MITGD A+ R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-- 68
Query: 225 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 284
P K E VK LQA+ + +G+G+NDAPAL
Sbjct: 69 ----------------------------PHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 99
Query: 285 KADIGIAVADATDAARSAADIVLTEPGLNVIITAV 319
+AD+GIAV +D A + DIVL L ++ A+
Sbjct: 100 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 63.3 bits (153), Expect = 3e-12
Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 27/148 (18%)
Query: 59 DVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKR--TALTYIDSEGKMHRVTKGS 112
D ++A++ + ++ R +V + F+ T K + D+ V KG+
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 113 PEQILNLLHNKSKIGRKV----------NAVINKFAERGLRSLAVAYQEVPEGSKESSGS 162
PE+IL+ + G+++ + G R L +P G
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 163 P-----------WQFIGLIPLFDPPIHD 179
F+GL+ + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 53.8 bits (128), Expect = 6e-09
Identities = 22/150 (14%), Positives = 42/150 (28%), Gaps = 6/150 (4%)
Query: 182 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 241
E + + +I+G + +Y + A D
Sbjct: 82 EFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGT 141
Query: 242 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARS 301
+ K ++ L N MIG+ V D A K +D+ A + R
Sbjct: 142 ------CSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECRE 195
Query: 302 AADIVLTEPGLNVIITAVLISRAIFQRMRN 331
L I + + + + ++N
Sbjct: 196 QNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 51.2 bits (122), Expect = 3e-08
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 253 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG 311
++++K IG+ D PA AVADA ++A D VL+ G
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 51.0 bits (121), Expect = 7e-08
Identities = 25/197 (12%), Positives = 58/197 (29%), Gaps = 33/197 (16%)
Query: 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDV 60
+V++A + LC D + + + G + + + +
Sbjct: 47 FDGLVELATICALCNDSSLDFN------ETKGVYEKVGEATETALTTLVEKMNVFNTEVR 100
Query: 61 IDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHR-----VTKGSPEQ 115
+ + A R +++ L F K ++ ++ KG+PE
Sbjct: 101 NLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEG 160
Query: 116 ILNLLHNKSKIGRKV------------NAVINKFAERGLRSLAVAYQEVPEGSKESSGSP 163
+++ + +V LR LA+A ++ P +E
Sbjct: 161 VIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDD 220
Query: 164 WQ----------FIGLI 170
F+G++
Sbjct: 221 SSRFMEYETDLTFVGVV 237
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 50.8 bits (120), Expect = 9e-08
Identities = 15/68 (22%), Positives = 24/68 (35%)
Query: 252 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG 311
+ + L + +G+G ND A K +AVA A + AD V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 212
Query: 312 LNVIITAV 319
A+
Sbjct: 213 GEGGAEAI 220
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 49.8 bits (117), Expect = 1e-07
Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 248 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVL 307
E +I K +G+G ND KKA + IA A + ADI +
Sbjct: 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICI 197
Query: 308 TEPGLNVIITAV 319
+ L I+ +
Sbjct: 198 EKRDLREILKYI 209
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.5 bits (117), Expect = 2e-07
Identities = 31/197 (15%), Positives = 59/197 (29%), Gaps = 16/197 (8%)
Query: 117 LNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPP 176
++ L + V + + + A G A E + S +
Sbjct: 27 IDELAKICGVEDAV-SEMTRRAMGGAVPFKAALTERLALIQPSR--EQVQRLIAEQPPHL 83
Query: 177 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVAL 236
E + R + V +I+G +I + +L + ++ L E
Sbjct: 84 TPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGE----- 138
Query: 237 PVDELIEKADGFAGVFPEHKYEIVKHLQARNHI--CGMIGNGVNDAPALKKADIGIAVA- 293
+ K +++K L+ + H MIG+G D A AD I
Sbjct: 139 ----YAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGG 194
Query: 294 -DATDAARSAADIVLTE 309
+ A +T+
Sbjct: 195 NVIRQQVKDNAKWYITD 211
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 48.1 bits (113), Expect = 5e-07
Identities = 32/212 (15%), Positives = 61/212 (28%), Gaps = 17/212 (8%)
Query: 119 LLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIH 178
L I K I ++GL +++ V + +
Sbjct: 14 LTDRDRLISTKAIESIRSAEKKGLT-VSLLSGNVIPVVYALKIFLGINGPVFGENGGIMF 72
Query: 179 DSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 238
D+ +I++ S T L + + TN + ++ E + +
Sbjct: 73 DNDGSIKKFFS-----NEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRK 127
Query: 239 DELIEKADGFAGVF-------PEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKAD 287
+ F + E K V L+ + +IG+ ND P +
Sbjct: 128 EAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPV 187
Query: 288 IGIAVADATDAARSAADIVLTEPGLNVIITAV 319
A+ATD ++ +D V I
Sbjct: 188 RKACPANATDNIKAVSDFVSDYSYGEEIGQIF 219
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 47.2 bits (111), Expect = 1e-06
Identities = 10/58 (17%), Positives = 18/58 (31%)
Query: 252 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 309
+ K + V ++ + G+ ND L +A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 47.3 bits (111), Expect = 1e-06
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 253 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGL 312
++KH N ++G+ ND L AVA+ATD+A+S A VL
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHR 268
Query: 313 NVIITAVL 320
+ +L
Sbjct: 269 EGAVAYLL 276
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 43.8 bits (102), Expect = 2e-05
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 255 HKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 306
K + + + I G+G ND L+ A IG+A+ A + ++AAD V
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYV 241
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 43.8 bits (102), Expect = 2e-05
Identities = 12/53 (22%), Positives = 23/53 (43%)
Query: 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 306
+ L + IG+ ND ++ A +G+AV +A + + A+ V
Sbjct: 200 TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 43.0 bits (100), Expect = 3e-05
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 255 HKYEIVKHLQARNHICG----MIGNGVNDAPALKKADIGIAVADATDAARSAADIV 306
K + +K L + +I +G+ +ND L+ A G+A+ +A + +S AD V
Sbjct: 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 43.0 bits (100), Expect = 4e-05
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Query: 223 ALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPA 282
LS + +D V +E ++ + + I + G+ ND
Sbjct: 163 ILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIV-VFGDNENDLFM 221
Query: 283 LKKADIGIAVADATDAARSAADIV 306
++A + +A+ +A + + A+DIV
Sbjct: 222 FEEAGLRVAMENAIEKVKEASDIV 245
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 43.0 bits (100), Expect = 4e-05
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 4/69 (5%)
Query: 255 HKYEIVKHLQARNHICG----MIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 310
HK + L R + IG+ NDA LK A A+ +A + + A +
Sbjct: 190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDN 249
Query: 311 GLNVIITAV 319
+ +
Sbjct: 250 NHEGALNVI 258
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Score = 36.9 bits (84), Expect = 0.003
Identities = 9/59 (15%), Positives = 17/59 (28%)
Query: 252 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 310
+ +HL + G+ ND + + G+ V +A D
Sbjct: 163 KGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSR 221
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 456 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.96 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.93 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.83 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.55 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.38 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.35 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.26 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.2 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.17 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.17 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.15 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.15 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.11 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.1 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.06 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.0 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.98 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.89 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.79 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.71 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.58 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.21 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.16 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 98.02 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.0 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 98.0 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.96 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.96 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.76 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.5 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.42 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.4 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 97.22 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 97.2 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.15 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.12 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.87 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.85 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.84 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.4 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 96.37 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 96.32 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 96.14 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 96.1 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 95.75 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.57 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 95.47 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 95.42 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 95.28 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 95.15 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 94.53 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 94.11 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 93.82 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 93.39 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 89.26 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=2e-33 Score=252.07 Aligned_cols=148 Identities=38% Similarity=0.531 Sum_probs=129.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--CccccCCchhhhhhcCChHHHHhhccccccc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDELIEKADGFAGV 251 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~--~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~ 251 (456)
||||++++++|+.|+++||+|+|+|||+..+|.++|+++||..+... ...+.|.+.+ .....+..+.+++..+|+++
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFD-DLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHH-HSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccc-hhhHHHHhhhhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999764321 1223333322 12223345677888999999
Q ss_pred CchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHHH
Q 012767 252 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 322 (456)
Q Consensus 252 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~~ 322 (456)
+|+||..+|+.||+.|+.|+|+|||.||+|||+.|||||+++++++.|+++||+++++++|..|+.+|+||
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.96 E-value=3.5e-30 Score=222.26 Aligned_cols=125 Identities=34% Similarity=0.479 Sum_probs=110.4
Q ss_pred eEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhh
Q 012767 165 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 244 (456)
Q Consensus 165 ~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 244 (456)
...+.++++|++|++++++|+.|+++|++++|+|||+..+|.++|++|||.
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-----------------------------
Confidence 456688999999999999999999999999999999999999999999995
Q ss_pred cccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 245 ADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 245 ~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.+|++++|++|..+|+.+|.. +.|+|+|||.||+|||++|||||+|+++++.++++||+++++++|..|+.+|+
T Consensus 62 -~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 -LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred -hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 479999999999999999875 69999999999999999999999999999999999999999999999998873
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.93 E-value=2.9e-30 Score=260.89 Aligned_cols=309 Identities=9% Similarity=-0.021 Sum_probs=209.1
Q ss_pred hHHHHhccccEEEcCcccccccCceEEEEEeee-----cccCCCChH-HHH------HHHHHhcccCCCChHHHHHHHhh
Q 012767 2 SAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIE-----IFAGGVDAD-TVV------LMAARASQVENLDVIDAAIVGML 69 (456)
Q Consensus 2 ~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~-----~~~~~~~~~-~il------~~aa~~~~~~~~~pi~~ai~~~~ 69 (456)
.+.|+||...++|+|||||+|.|+|.+..+.-+ ....+.+.+ ++. .++..+... .+|-..+++...
T Consensus 31 ~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 108 (380)
T d1qyia_ 31 MDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKL--SHDEIEAFMYQD 108 (380)
T ss_dssp HCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTS--CHHHHHHHHHCS
T ss_pred hchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhhc--CCCcHHHHHHHH
Confidence 567899999999999999999999987532110 001122222 111 122222221 234455555432
Q ss_pred cCc----hhhhhcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeee
Q 012767 70 ADP----KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSL 145 (456)
Q Consensus 70 ~~~----~~~~~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l 145 (456)
... ...+..+.....+||++.+|+|++.....++.+..+.+|+++.+. ........+...+.+++.+|+|++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~~~~~~~~~~~a~~~~r~l 184 (380)
T d1qyia_ 109 EPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH----VSDATLFSLKGALWTLAQEVYQEW 184 (380)
T ss_dssp SCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT----CSCCGGGSTTCHHHHHHHHHHHHH
T ss_pred hhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC----CcHHHHHHHHhHHHHHHHHHHHHH
Confidence 211 122455666778899999999876554333333444566665542 222334455667789999999999
Q ss_pred EEeeeecCCCCcCCCCCCceEeEecccCCCCC--cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc
Q 012767 146 AVAYQEVPEGSKESSGSPWQFIGLIPLFDPPI--HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSA 223 (456)
Q Consensus 146 ~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r--~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~ 223 (456)
+++++..+..... ........|++..++++| ++++++|+.|+++|++++|+|||+..+|..+++++||........+
T Consensus 185 ~~~~~~~~~~~~~-~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i 263 (380)
T d1qyia_ 185 YLGSKLYEDVEKK-IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFI 263 (380)
T ss_dssp HHHHHHHHHHHCS-CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGE
T ss_pred HHhhhcccccccc-cchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceE
Confidence 9998765321111 122335679999999955 5999999999999999999999999999999999999753322333
Q ss_pred ccCCchhh--------hhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcC---eeEEe
Q 012767 224 LSGQDRDE--------SIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD---IGIAV 292 (456)
Q Consensus 224 l~g~~~~~--------~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Ad---vGIa~ 292 (456)
+.+++... .....+..+.+..+..+++++|++|..+++.++..++.|+|||||+||++|++.|| |||+|
T Consensus 264 ~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~ 343 (380)
T d1qyia_ 264 ATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLT 343 (380)
T ss_dssp ECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred EecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEec
Confidence 33332111 11122334555566678999999999999999999999999999999999999999 99999
Q ss_pred c-cccHHHhh----cccEEeeCCCchHHHHHH
Q 012767 293 A-DATDAARS----AADIVLTEPGLNVIITAV 319 (456)
Q Consensus 293 ~-~~~~~a~~----aaDivl~~~~l~~i~~~i 319 (456)
| .+++..++ .||+|+ +++..+..++
T Consensus 344 G~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 344 GLKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp BTTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CCCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 8 45554443 799999 5577776554
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.83 E-value=5.6e-20 Score=170.45 Aligned_cols=122 Identities=20% Similarity=0.266 Sum_probs=97.5
Q ss_pred CChHHHHHHHhhc----CchhhhhcceEEEeecCCCCCceEEEEEEec--CCcEEEEEcCcHHHHHhhcc----------
Q 012767 58 LDVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDS--EGKMHRVTKGSPEQILNLLH---------- 121 (456)
Q Consensus 58 ~~pi~~ai~~~~~----~~~~~~~~~~~~~~~pf~~~~k~~~v~~~~~--~g~~~~~~KGa~e~Il~~~~---------- 121 (456)
.+|.|.||+.++. +....+..++.++.+||+|.+|+|+++++.. ++.+++|+|||||.|+++|+
T Consensus 65 GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~ 144 (214)
T d1q3ia_ 65 GDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIP 144 (214)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEE
T ss_pred cChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceee
Confidence 4899999997653 4455678899999999999999999998863 45678899999999999997
Q ss_pred CCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCC-----------cCCCCCCceEeEecccCCCCCcc
Q 012767 122 NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS-----------KESSGSPWQFIGLIPLFDPPIHD 179 (456)
Q Consensus 122 ~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~-----------~~~~e~~~~~lG~i~l~d~~r~~ 179 (456)
.+++.++.+.+.+++|+.+|+|||++||+.++... .+..+++|+|+|++++.||||++
T Consensus 145 l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 145 LDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred chHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 24556788999999999999999999999987543 23457899999999999999985
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.55 E-value=2.1e-15 Score=141.57 Aligned_cols=152 Identities=15% Similarity=0.233 Sum_probs=106.3
Q ss_pred cCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhccc------------CCCChHHHHHHHhhcCc----------
Q 012767 15 CDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQV------------ENLDVIDAAIVGMLADP---------- 72 (456)
Q Consensus 15 ~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~------------~~~~pi~~ai~~~~~~~---------- 72 (456)
++..|+++.+.-.+.. ........++..+++|+.. ...+|.|.||+.++...
T Consensus 29 y~p~G~i~~~~~~v~~------~~~~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~ 102 (239)
T d1wpga3 29 YAPEGEVLKNDKPIRS------GQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNL 102 (239)
T ss_dssp SSSCCCEEETTEECCG------GGCHHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSS
T ss_pred eCCceEEEECCcCcCc------cccHHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhcc
Confidence 3566777777654421 1111223455666666432 11479999998765210
Q ss_pred ----------hhhhhcceEEEeecCCCCCceEEEEEEecCC-----cEEEEEcCcHHHHHhhcc----------CCchhh
Q 012767 73 ----------KEARADIQEVHFLPFDPTGKRTALTYIDSEG-----KMHRVTKGSPEQILNLLH----------NKSKIG 127 (456)
Q Consensus 73 ----------~~~~~~~~~~~~~pf~~~~k~~~v~~~~~~g-----~~~~~~KGa~e~Il~~~~----------~~~~~~ 127 (456)
...+..|+.++.+||+|.+|||+++++..++ .+.+|+|||||.|+++|. .+++..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~ 182 (239)
T d1wpga3 103 SKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVK 182 (239)
T ss_dssp CHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHH
T ss_pred chhhhhccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHH
Confidence 1125678899999999999999999987554 357899999999999996 234455
Q ss_pred hHHHHHHHHH--HHccCeeeEEeeeecCCCCc----------CCCCCCceEeEeccc
Q 012767 128 RKVNAVINKF--AERGLRSLAVAYQEVPEGSK----------ESSGSPWQFIGLIPL 172 (456)
Q Consensus 128 ~~~~~~i~~~--~~~Glr~l~vA~~~~~~~~~----------~~~e~~~~~lG~i~l 172 (456)
+.+.+.++++ +++|+|||++||+.++..+. +.+|++|+|+|++++
T Consensus 183 ~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 183 EKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp HHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred HHHHHHHHHHhHhhCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 6677777776 67999999999999875532 234789999999985
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.38 E-value=3.4e-13 Score=123.13 Aligned_cols=148 Identities=22% Similarity=0.202 Sum_probs=104.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCC--c-ccc-C-----Cchh---------------
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS--S-ALS-G-----QDRD--------------- 230 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~--~-~l~-g-----~~~~--------------- 230 (456)
.+.+.+.++|++|++.|++|+++||+....+..+...+++....... . ... + ....
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 46788999999999999999999999999999999999886421100 0 000 0 0000
Q ss_pred ----hhh-----------hcCC---hHHHHhhcc---------cccccCc--hhHHHHHHHHhhc----CCEEEEecCCC
Q 012767 231 ----ESI-----------VALP---VDELIEKAD---------GFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGV 277 (456)
Q Consensus 231 ----~~~-----------~~~~---~~~~~~~~~---------v~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG~ 277 (456)
... .... ..++..+.. .+..+.| ..|...++.+.++ .+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 000 0000 111211111 1223333 4678777776554 45699999999
Q ss_pred CchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHHH
Q 012767 278 NDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 322 (456)
Q Consensus 278 ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~~ 322 (456)
||.+||+.||+||||+++++.+++.||+|+..++..++.++|.+.
T Consensus 179 NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999888743
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.35 E-value=3.1e-12 Score=117.46 Aligned_cols=149 Identities=19% Similarity=0.157 Sum_probs=105.0
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--Cccc-cCCc----------hhh---hh---
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSAL-SGQD----------RDE---SI--- 233 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~--~~~l-~g~~----------~~~---~~--- 233 (456)
...+.+++.++++.|++.|++++++||++...+..+...+|+...... ...+ ..+. ... ..
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 345678999999999999999999999999999999999998653210 0000 0000 000 00
Q ss_pred --------------------hcCChHHHHh---hc-------ccccccCc--hhHHHHHHHHhhc----CCEEEEecCCC
Q 012767 234 --------------------VALPVDELIE---KA-------DGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGV 277 (456)
Q Consensus 234 --------------------~~~~~~~~~~---~~-------~v~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG~ 277 (456)
.....+.+.. .. ..+..+.| .+|...++.+.++ ...|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 0000011110 00 01233444 4788888877654 34599999999
Q ss_pred CchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 278 NDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 278 ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
||.+|++.|++||||+++.+.+++.||+|+..++..+|.++++.
T Consensus 178 nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999988863
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.26 E-value=1.1e-11 Score=110.31 Aligned_cols=101 Identities=25% Similarity=0.272 Sum_probs=83.7
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHH
Q 012767 182 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 261 (456)
Q Consensus 182 ~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~ 261 (456)
..|+.|+..|+.+.++||+....+...++.+++.. ++.. ..+|...++
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------------------------------~~~~--~~~K~~~l~ 86 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLG--KLEKETACF 86 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEES--CSCHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc------------------------------cccc--cccHHHHHH
Confidence 37999999999999999999999999999999851 2222 345555555
Q ss_pred HHhh----cCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchH
Q 012767 262 HLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV 314 (456)
Q Consensus 262 ~lq~----~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~ 314 (456)
.+.+ ....|+++||+.||.+||+.|++|+|+++|.+.++..||+|+..++-.+
T Consensus 87 ~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~G 143 (177)
T d1k1ea_ 87 DLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKG 143 (177)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTT
T ss_pred HHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCc
Confidence 4433 3467999999999999999999999999999999999999999887544
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.20 E-value=1.3e-11 Score=115.97 Aligned_cols=71 Identities=23% Similarity=0.232 Sum_probs=61.9
Q ss_pred ccCch--hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 250 GVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 250 ~~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.+.|. +|...++.+.+. ...++++|||.||.+||+.|+.|+||+|+.+.++..||+|+..++-.++.++++
T Consensus 190 ~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 190 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 34554 699999888765 345999999999999999999999999999999999999999888888988776
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.17 E-value=1.1e-11 Score=113.24 Aligned_cols=148 Identities=14% Similarity=0.060 Sum_probs=106.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
+++|++.+.++.|++.|+++.++|+.....+..+.+++|+....+........+.... ..+ ......++...|.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~--~~~----~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHI--DWP----HSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEE--ECT----TCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCccee--ccc----cccccccccCCHH
Confidence 3689999999999999999999999999999999999987643322111111100000 000 0001235567889
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhc-ccEEeeCCCchHHHHHHHHHHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSA-ADIVLTEPGLNVIITAVLISRAIFQRM 329 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~a-aDivl~~~~l~~i~~~i~~~R~i~~~i 329 (456)
.|..+++.++..++.|+|+||+.||.+|++.||+++|++...+.+.+. .+++ .-.+|+.|...+..-..+.+.+
T Consensus 149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~-~~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHL-PYQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEE-CCSSHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCee-ecCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998765656554 3333 3468898888887665555544
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.17 E-value=3e-11 Score=110.70 Aligned_cols=122 Identities=18% Similarity=0.181 Sum_probs=90.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCc----cccCCchhhhhhcCChHHHHhhcccccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSS----ALSGQDRDESIVALPVDELIEKADGFAG 250 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~----~l~g~~~~~~~~~~~~~~~~~~~~v~a~ 250 (456)
+++|++.++|+.|++.|++++++||.....+..+++.+|+.....-.. ...|.... .......
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g-------------~~~~~p~ 148 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAG-------------FDETQPT 148 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEE-------------ECTTSGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhcccc-------------ceeeeee
Confidence 368999999999999999999999999999999999999963210000 00111000 0001122
Q ss_pred cCchhHHHHHHHHhhc--CCEEEEecCCCCchhhhhhcCeeEEecc--ccHHHhhcccEEeeC
Q 012767 251 VFPEHKYEIVKHLQAR--NHICGMIGNGVNDAPALKKADIGIAVAD--ATDAARSAADIVLTE 309 (456)
Q Consensus 251 ~~P~~K~~iV~~lq~~--g~~v~~iGDG~ND~~aLk~AdvGIa~~~--~~~~a~~aaDivl~~ 309 (456)
..+..|..+++.++.+ ...|+|+|||.||++|++.||++||++. .....++.+|+++.+
T Consensus 149 ~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 149 AESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp GSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred eccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC
Confidence 4567799999999765 3469999999999999999999999973 445677789998854
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.15 E-value=5.9e-11 Score=111.97 Aligned_cols=70 Identities=21% Similarity=0.276 Sum_probs=61.8
Q ss_pred cCch--hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 251 VFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 251 ~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
+.|. .|...++.+.+. ...|+++|||.||.+||+.|+.||||+|+++.+++.||+|+..++-.+|.++|+
T Consensus 207 i~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 207 LSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 4554 799988888765 246999999999999999999999999999999999999999888889988875
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.15 E-value=1.7e-11 Score=115.09 Aligned_cols=72 Identities=21% Similarity=0.249 Sum_probs=62.9
Q ss_pred cccCch--hHHHHHHHHhhc-C---CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 249 AGVFPE--HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 249 a~~~P~--~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
-+++|. .|...++.|.++ | ..|+++|||.||.+||+.|+.|+||+|+.+.+++.|++|+..++-.++..+|+
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 355564 599999888765 2 45999999999999999999999999999999999999999889999988886
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.11 E-value=1.9e-11 Score=114.60 Aligned_cols=73 Identities=26% Similarity=0.283 Sum_probs=63.4
Q ss_pred cccCch--hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 249 AGVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 249 a~~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
..+.|. .|...++.|.++ ...++++|||.||.+||+.|+.||||+||.+.+++.||+|..+++-.++.++|+.
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 445564 699888888664 4569999999999999999999999999999999999999988888999998863
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.10 E-value=3.4e-11 Score=107.55 Aligned_cols=137 Identities=21% Similarity=0.180 Sum_probs=94.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccC
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 252 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~ 252 (456)
..++.+++.+.++.++..|..+.++||.....+....++.++....... +........... . .....+...
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~----~~~~~~~~~ 143 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANR--LIVKDGKLTGDV---E----GEVLKENAK 143 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEE--EEEETTEEEEEE---E----CSSCSTTHH
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhh--hccccccccccc---c----ccccccccc
Confidence 3467789999999999999999999999999999999988875321100 000000000000 0 000011111
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHH
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
+.....+.+.++.....++|+|||.||++|++.||+|||| ++.+..++.||+|+..+++.+|+.+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 144 GEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred cchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 2222334444444466799999999999999999999999 89999999999999988999887654
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.06 E-value=3.4e-10 Score=100.70 Aligned_cols=130 Identities=15% Similarity=0.176 Sum_probs=91.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
+..++....+..+ +.+.++.++|+............+++.............. .........+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~~~~~~~~ 132 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD---------------RVVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS---------------CEEEEECCSSS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc---------------ccccccccchh
Confidence 3456666667665 5789999999999999999999988753211110000000 00112334456
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
.+...++.++.....|+|+|||.||++||+.||+||||+...+..++++|+++. .++..++.+|..
T Consensus 133 ~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred hHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 667788888888999999999999999999999999995555556677788765 678888876654
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.00 E-value=3.8e-10 Score=105.84 Aligned_cols=71 Identities=20% Similarity=0.294 Sum_probs=62.2
Q ss_pred ccCch--hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 250 GVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 250 ~~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.++|. .|+..++.+.+. ...|+++|||.||.+||+.|++||||+||++.+++.||+|+.+++-.++.++|+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 45664 699988887654 245999999999999999999999999999999999999999999999998875
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.98 E-value=2.9e-10 Score=106.61 Aligned_cols=66 Identities=29% Similarity=0.324 Sum_probs=54.1
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCch-HHHHHHH
Q 012767 255 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLN-VIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~-~i~~~i~ 320 (456)
.|...++.+.+. ...|+++|||.||.+||+.||+|+||++|.+.+++.||+|+..++-. ++..+++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 577777776554 35699999999999999999999999999999999999999765544 4555554
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.89 E-value=3.6e-09 Score=89.49 Aligned_cols=122 Identities=21% Similarity=0.288 Sum_probs=92.5
Q ss_pred cCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchh---hhhcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcH
Q 012767 37 AGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKE---ARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSP 113 (456)
Q Consensus 37 ~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~---~~~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~ 113 (456)
..|++.++++.+|+.++..++| |+.+||+.++++... ....+....+.||....+...+. .+| ..+.+|++
T Consensus 10 ~~G~~~~ell~~AA~aE~~SeH-PlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~g--~~v~~G~~ 83 (136)
T d2a29a1 10 AQGVDEKTLADAAQLASLADET-PEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGIN---IDN--RMIRKGSV 83 (136)
T ss_dssp CTTCCHHHHHHHHHHHHHTCCS-HHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEE---ETT--EEEEEECH
T ss_pred CCCCCHHHHHHHHHHHhCCCCc-hHHHHHHHHHHHhcCCCccccccccccccccccccceEEEE---ECC--EEEEecHH
Confidence 4799999999999999998886 999999998753221 11233445567777766554433 356 45678999
Q ss_pred HHHHhhccC-CchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCC
Q 012767 114 EQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPI 177 (456)
Q Consensus 114 e~Il~~~~~-~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r 177 (456)
..+.+++.. ...+...+...++.++.+|.+++.|+.+. +++|++++.|++|
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 84 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECC-------------EEEEEEEEEeecC
Confidence 888765532 23456778889999999999999999876 9999999999986
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.79 E-value=2.4e-09 Score=97.86 Aligned_cols=44 Identities=11% Similarity=0.053 Sum_probs=39.2
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 216 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~ 216 (456)
.+...+.++++|++|+++|+.++++||++...+..+.+.+++..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 34445788999999999999999999999999999999999864
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.71 E-value=1.2e-08 Score=93.88 Aligned_cols=68 Identities=18% Similarity=0.122 Sum_probs=57.9
Q ss_pred hhHHHHHHHHhhcC----CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhccc-------EEeeCCCchHHHHHHHH
Q 012767 254 EHKYEIVKHLQARN----HICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD-------IVLTEPGLNVIITAVLI 321 (456)
Q Consensus 254 ~~K~~iV~~lq~~g----~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaD-------ivl~~~~l~~i~~~i~~ 321 (456)
..|...++.+.+.. ..|+++|||.||.+||+.||.|++|+|+.+.+++.|| ++-..++..+|.++|.+
T Consensus 161 ~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 161 SNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred cchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 46999998887762 3499999999999999999999999999999999888 56666677888887764
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.58 E-value=1.6e-07 Score=84.43 Aligned_cols=41 Identities=15% Similarity=0.067 Sum_probs=38.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 215 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~ 215 (456)
.+.+.++++|++|++.|+.++++||++...+..+.+.+|+.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 46688999999999999999999999999999999999985
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.21 E-value=2.5e-07 Score=83.22 Aligned_cols=58 Identities=24% Similarity=0.370 Sum_probs=49.2
Q ss_pred ccCc--hhHHHHHHHHhhc-CCEEEEecC----CCCchhhhhhcC-eeEEeccccHHHhhcccEEe
Q 012767 250 GVFP--EHKYEIVKHLQAR-NHICGMIGN----GVNDAPALKKAD-IGIAVADATDAARSAADIVL 307 (456)
Q Consensus 250 ~~~P--~~K~~iV~~lq~~-g~~v~~iGD----G~ND~~aLk~Ad-vGIa~~~~~~~a~~aaDivl 307 (456)
+++| -.|...++.|.+. ...|+++|| |.||.+||+.|+ .|+||+|+.+.++..+|+++
T Consensus 178 ei~~~~vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 178 DVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp EEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred eecchhccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 4445 3689999988764 567999999 569999999997 79999999999999999875
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.16 E-value=2e-06 Score=69.86 Aligned_cols=104 Identities=15% Similarity=0.189 Sum_probs=74.5
Q ss_pred CCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHh
Q 012767 39 GVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILN 118 (456)
Q Consensus 39 ~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~ 118 (456)
+.++++++.+++..+..++| |+++||+.++.+.+......+.++..|... + .|+ .+..|++.++.+
T Consensus 9 ~~~e~elL~~aaslE~~S~H-PlA~AIv~~a~~~~~~~~~~~~~~~~~G~G------i-----~g~--~v~vG~~~~~~~ 74 (113)
T d2b8ea2 9 NGDERELLRLAAIAERRSEH-PIAEAIVKKALEHGIELGEPEKVEVIAGEG------V-----VAD--GILVGNKRLMED 74 (113)
T ss_dssp SSCHHHHHHHHHHHTTTCCS-HHHHHHHHHHHTTTCCCCCCSCEEEETTTE------E-----EET--TEEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHCcCCC-chHHHHHHHHHHhcCCCCccccceeeccce------E-----EeE--EEEECcHHHHHh
Confidence 45889999999999999887 999999998865432222222233333211 0 112 255699999876
Q ss_pred hccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEeccc
Q 012767 119 LLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPL 172 (456)
Q Consensus 119 ~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l 172 (456)
.. -.+++.+...+..+..+|.++++|+.++ .++|++++
T Consensus 75 ~~---~~~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 75 FG---VAVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TT---CCCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred cC---CCCCHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEE
Confidence 32 2456678888999999999999999976 89999876
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.02 E-value=5.9e-06 Score=74.23 Aligned_cols=124 Identities=14% Similarity=0.125 Sum_probs=80.5
Q ss_pred CCcchHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 176 PIHDSAETIRRALSLG-LGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~G-i~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
+-|++.++++.|++.| +++.++|+.....+..+.+.+|+..-. ..++.+++.. ...-.|+
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~-----------------~~k~~p~ 152 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF--PFGAFADDAL-----------------DRNELPH 152 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC--SCEECTTTCS-----------------SGGGHHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccc--cccccccccc-----------------cccchhH
Confidence 4579999999999987 899999999999999999999986421 1111111100 0011111
Q ss_pred hHHHHHHHHhh---cCCEEEEecCCCCchhhhhhcCee---EEeccccH--HHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQA---RNHICGMIGNGVNDAPALKKADIG---IAVADATD--AARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~---~g~~v~~iGDG~ND~~aLk~AdvG---Ia~~~~~~--~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
--...++.+.. ....++||||+.+|+.|-+.|++. |+.|.... .....+|+++ ++++.+..++.
T Consensus 153 ~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 153 IALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 11223333322 235799999999999999999954 33343222 2344679998 56877777664
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.00 E-value=2.2e-06 Score=76.39 Aligned_cols=58 Identities=10% Similarity=0.182 Sum_probs=43.8
Q ss_pred cccCc--hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeC
Q 012767 249 AGVFP--EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 309 (456)
Q Consensus 249 a~~~P--~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~ 309 (456)
.++.| .+|...++.|..+. .++++||+.||.+||+.|+.|++|++|. .+.+|++++.+
T Consensus 151 idi~p~g~~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~~g~--~~~~A~~~~~~ 210 (229)
T d1u02a_ 151 IELRVPGVNKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIKVGE--GETHAKFHVAD 210 (229)
T ss_dssp EEEECTTCCHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEEESS--SCCCCSEEESS
T ss_pred EEEecCCCCHHHHHHHHhccc-cceeecCCCChHHHHhccCCeEEEEeCC--CCccCeEEcCC
Confidence 34445 36999999998764 5788999999999999997776665432 24678888854
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=98.00 E-value=1.4e-05 Score=73.11 Aligned_cols=126 Identities=14% Similarity=0.161 Sum_probs=87.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++||.+...+..+.+.+|+..-. ...++.+++. ....-.|+
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f-~d~~~~~d~~-----------------~~~KP~p~ 160 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDV-----------------PAGRPYPW 160 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGS-----------------SCCTTSSH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccc-cccccccccc-----------------cccccChH
Confidence 57899999999999999999999999999999999999886321 1222222111 11223344
Q ss_pred hHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCee-EEeccccH---------------------------HHhhcccE
Q 012767 255 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG-IAVADATD---------------------------AARSAADI 305 (456)
Q Consensus 255 ~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~~~---------------------------~a~~aaDi 305 (456)
.=...++.+.-. ...|+||||+.+|+.+-+.||+- |++..|.. ..+.-||+
T Consensus 161 ~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~ 240 (257)
T d1swva_ 161 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 240 (257)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCE
Confidence 445566666643 46799999999999999999973 44433211 01123899
Q ss_pred EeeCCCchHHHHHHH
Q 012767 306 VLTEPGLNVIITAVL 320 (456)
Q Consensus 306 vl~~~~l~~i~~~i~ 320 (456)
|+ +++..+..+|.
T Consensus 241 vi--~~l~eL~~ii~ 253 (257)
T d1swva_ 241 TI--ETMQELESVME 253 (257)
T ss_dssp EE--SSGGGHHHHHH
T ss_pred EE--CCHHHHHHHHH
Confidence 99 55878887775
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.96 E-value=2.6e-05 Score=73.50 Aligned_cols=131 Identities=10% Similarity=0.047 Sum_probs=79.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCC---CC-CccccCCchhhhhhcCChHHHHhhcccccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM---YP-SSALSGQDRDESIVALPVDELIEKADGFAG 250 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~---~~-~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~ 250 (456)
++|+|+++.++.|++.|+++.++||--.....++.+++|+.... +. ...+.++........ --
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~-------------~~ 201 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKG-------------EL 201 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECS-------------SC
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccC-------------Cc
Confidence 58999999999999999999999999999999999999986421 10 001111100000000 00
Q ss_pred cCchhHHHHH----HHHh--hcCCEEEEecCCCCchhhhhh---cCeeEEec--cc-----cHHHhhcccEEeeCCCchH
Q 012767 251 VFPEHKYEIV----KHLQ--ARNHICGMIGNGVNDAPALKK---ADIGIAVA--DA-----TDAARSAADIVLTEPGLNV 314 (456)
Q Consensus 251 ~~P~~K~~iV----~~lq--~~g~~v~~iGDG~ND~~aLk~---AdvGIa~~--~~-----~~~a~~aaDivl~~~~l~~ 314 (456)
.....|...+ ..++ .....+.++|||+||..|.+. ++..+++| +. -+.-.++-|||+.++.--.
T Consensus 202 i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~ 281 (291)
T d2bdua1 202 IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLE 281 (291)
T ss_dssp CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCH
T ss_pred cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChh
Confidence 1122233222 2222 235679999999999999874 34555544 21 1233467899988665444
Q ss_pred HHHH
Q 012767 315 IITA 318 (456)
Q Consensus 315 i~~~ 318 (456)
++..
T Consensus 282 v~~~ 285 (291)
T d2bdua1 282 VVNS 285 (291)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.96 E-value=8.1e-06 Score=72.54 Aligned_cols=124 Identities=15% Similarity=0.151 Sum_probs=85.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
.+.|++.++++.|++.|+++.++|+.....+..+.+.+|+... ++ .++.+.+. ....-.|+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~-f~-~~~~~~~~-----------------~~~kp~p~ 155 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL-FS-EMLGGQSL-----------------PEIKPHPA 155 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG-CS-EEECTTTS-----------------SSCTTSSH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhh-cc-cccccccc-----------------ccccccch
Confidence 4579999999999999999999999999999999999998532 11 11111100 01122334
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe-eEEecc----ccHHHhhcccEEeeCCCchHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD----ATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~----~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
--..+.+.++-....++||||..+|+.+-+.||+ .|.+.. ..+.....+|+++ +++..++.+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 156 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred hhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEE--CCHHHHHHhh
Confidence 3445556666667789999999999999999997 444432 2233445688888 4577666543
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.76 E-value=4.4e-05 Score=67.57 Aligned_cols=119 Identities=17% Similarity=0.219 Sum_probs=81.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..- + ..++.+++. ..+.-.|+
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~-F-~~i~~~~~~-----------------~~~Kp~~~ 148 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS-F-DALASAEKL-----------------PYSKPHPQ 148 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-C-SEEEECTTS-----------------SCCTTSTH
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccc-c-ccccccccc-----------------ccchhhHH
Confidence 3569999999999999999999999999999999999999531 1 122222111 11222233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE-ecc---ccHHHhhcccEEeeCCCchH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VAD---ATDAARSAADIVLTEPGLNV 314 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~~---~~~~a~~aaDivl~~~~l~~ 314 (456)
-=..+++.+.-....++||||+.+|+.|-+.||+... +.. ..+.....||+++. +|..
T Consensus 149 ~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~--~l~e 210 (218)
T d1te2a_ 149 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS--SLTE 210 (218)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS--CGGG
T ss_pred HHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEEC--Chhh
Confidence 3345666666667789999999999999999997543 322 22222356788774 4554
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.50 E-value=6.7e-05 Score=65.92 Aligned_cols=120 Identities=11% Similarity=0.046 Sum_probs=80.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.+++.+.++.++..+ ++.++|+.....+..+.+.+|+.... ..++.+. -.....|+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f--d~v~~~~-------------------~~~~~~p~ 141 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF--DGIYGSS-------------------PEAPHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEEC-------------------SSCCSHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc--ccccccc-------------------cccccccc
Confidence 46789999999998765 89999999999999999999986321 1111110 01122233
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe-eEEecc---c-cHHHhhcccEEeeCCCchHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD---A-TDAARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~---~-~~~a~~aaDivl~~~~l~~i~~~ 318 (456)
-...+++.++-....++||||+.||+.|-+.||+ .|++.. . .+.....+|+++ +++..+...
T Consensus 142 ~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~ 208 (210)
T d2ah5a1 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAY 208 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHH
T ss_pred ccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHHH
Confidence 3344455555556679999999999999999998 555532 2 223334589987 447666654
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.42 E-value=0.00037 Score=60.40 Aligned_cols=134 Identities=19% Similarity=0.187 Sum_probs=79.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH---------------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHH
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLA---------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~---------------~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 240 (456)
+-|++.++++.|+++|+++.++|..... .........|+... ...+.....+.. ...
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~cp~~p~~~-----~~~ 99 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD---GIYYCPHHPQGS-----VEE 99 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS---EEEEECCBTTCS-----SGG
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccccc---ceeecccccccc-----ccc
Confidence 3489999999999999999999986531 01111122232211 000000000000 000
Q ss_pred HHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee--EEecc---ccHHHhhcccEEeeCCCchHH
Q 012767 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVAD---ATDAARSAADIVLTEPGLNVI 315 (456)
Q Consensus 241 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG--Ia~~~---~~~~a~~aaDivl~~~~l~~i 315 (456)
......+..-.|.--..+++.+.-....++||||..+|..|-+.|+++ +.+.. ..+.....||+|+ +++..+
T Consensus 100 -~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl 176 (182)
T d2gmwa1 100 -FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 176 (182)
T ss_dssp -GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred -ccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHH
Confidence 000011233345555566777766667799999999999999999985 44442 2345566799998 568888
Q ss_pred HHHHH
Q 012767 316 ITAVL 320 (456)
Q Consensus 316 ~~~i~ 320 (456)
+.+|+
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88775
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.40 E-value=0.0004 Score=61.82 Aligned_cols=124 Identities=17% Similarity=0.172 Sum_probs=81.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|+ .|+++.++|+........+.+.+|+... ++ .++... ++ ....-.|+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~-fd-~i~~s~------------~~-----~~~KP~~~ 159 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDL-FD-SITTSE------------EA-----GFFKPHPR 159 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGG-CS-EEEEHH------------HH-----TBCTTSHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccc-cc-cccccc------------cc-----cccchhhH
Confidence 46799999999996 5899999999999888999999998521 11 111100 00 01111111
Q ss_pred hHHHHHHHHhhcCCEEEEecCC-CCchhhhhhcCeeEEe---ccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNG-VNDAPALKKADIGIAV---ADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG-~ND~~aLk~AdvGIa~---~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
-=..+++.+.-....++||||. .+|+.+-+.||+.... ++........+|+++ .+++.++.+|.
T Consensus 160 ~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~ 227 (230)
T d1x42a1 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHH
T ss_pred HHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEE--CCHHHHHHHHH
Confidence 1134445555455679999997 6999999999886432 233444456789988 45888887775
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.22 E-value=0.00018 Score=62.87 Aligned_cols=118 Identities=16% Similarity=0.100 Sum_probs=75.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+... .+..+.+.+|+..-. ..++.+++ .....-.|+
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f--~~i~~s~~-----------------~~~~Kp~~~ 141 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF--TEILTSQS-----------------GFVRKPSPE 141 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE--EEEECGGG-----------------CCCCTTSSH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccc--cccccccc-----------------ccccchhHH
Confidence 3579999999999999999999998654 456678889985311 11111000 011222344
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE-EeccccHHHhhcccEEeeCCCchHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AVADATDAARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI-a~~~~~~~a~~aaDivl~~~~l~~i~~~ 318 (456)
--..+++.+.-....|+||||+.+|..+-+.||+.. .+..++ ..+|..+ .++..+..+
T Consensus 142 ~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~----~~~~~~~--~~~~dl~~l 200 (204)
T d2go7a1 142 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST----YEGNHRI--QALADISRI 200 (204)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS----CTTEEEC--SSTTHHHHH
T ss_pred HHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCC----CCcCeec--CCHHHHHHH
Confidence 444556666655678999999999999999999853 344443 2345544 335555443
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.20 E-value=8.9e-05 Score=65.18 Aligned_cols=119 Identities=13% Similarity=0.101 Sum_probs=78.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchh
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 255 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 255 (456)
+.|++.++++.|++ ++++.++|+.....+..+.+++|+.... ..++.+++ .....-.|+-
T Consensus 83 ~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f--~~i~~~~~-----------------~~~~KP~p~~ 142 (207)
T d2hdoa1 83 LYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADD-----------------TPKRKPDPLP 142 (207)
T ss_dssp ECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGG-----------------SSCCTTSSHH
T ss_pred cccchhhhhhhhcc-cccccccccccccccccccccccccccc--cccccccc-----------------cccchhhhhh
Confidence 56899999999975 7999999999999999999988875311 11111100 0011222333
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe---ccccHHHhhcccEEeeCCCchHHH
Q 012767 256 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV---ADATDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 256 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~---~~~~~~a~~aaDivl~~~~l~~i~ 316 (456)
-..+++.++-....|+||||+.+|+.+-+.||+.... |..+....+.+|.++ .++..|.
T Consensus 143 ~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dll 204 (207)
T d2hdoa1 143 LLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDIL 204 (207)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGGG
T ss_pred hcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEe--CCHHHHH
Confidence 3455555554556799999999999999999998664 233334445678777 3455544
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.15 E-value=0.00024 Score=60.47 Aligned_cols=90 Identities=10% Similarity=-0.003 Sum_probs=62.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcH-HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQL-AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~-~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
++.|++.++++.|++.|+++.++|+-+. ..+..+-+..++.... . .+...-.|
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~--~------------------------~~~~~~kp 99 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYF--I------------------------QREIYPGS 99 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGC--S------------------------EEEESSSC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccc--e------------------------eeecccCC
Confidence 4689999999999999999999997554 5566666777663110 0 01111122
Q ss_pred --hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 254 --EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 254 --~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
+.-..+.+.+.-....++||||..+|+.+-++|++-.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~ 138 (164)
T d1u7pa_ 100 KVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTC 138 (164)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred ChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEE
Confidence 3333455555555678999999999999999998843
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.12 E-value=0.00067 Score=60.12 Aligned_cols=102 Identities=15% Similarity=0.052 Sum_probs=70.6
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccC
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 252 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~ 252 (456)
.-.+.||+.++++.|++.|+++.++|+............+|+..-. +......+. .....-.
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~-~~~~~~~d~-----------------~~~~KP~ 186 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL-ELVDGHFDT-----------------KIGHKVE 186 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG-GGCSEEECG-----------------GGCCTTC
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhh-hhcceeecc-----------------ccccCCC
Confidence 3457899999999999999999999999999988888888875311 100000000 0011222
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
|+-=....+.+.-....|+||||..+|+.+-++||+-...
T Consensus 187 p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~ 226 (253)
T d1zs9a1 187 SESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAV 226 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEE
T ss_pred cHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEE
Confidence 2222345556655567899999999999999999986554
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.87 E-value=0.0012 Score=56.93 Aligned_cols=108 Identities=11% Similarity=0.052 Sum_probs=69.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.+.++.|++.|+++.++|+-..... .+.+.+|+... + ..++.+++. ....-.|+
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~-f-d~i~~~~~~-----------------~~~KP~p~ 138 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAY-F-TEVVTSSSG-----------------FKRKPNPE 138 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGG-E-EEEECGGGC-----------------CCCTTSCH
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccc-c-ccccccccc-----------------cccCCCHH
Confidence 4578999999999999999999999766544 56678887531 1 111111100 00111223
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhccc
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD 304 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaD 304 (456)
--..+.+.+. -..++||||..+|+.+-+.||+-...-.+....++.-|
T Consensus 139 ~~~~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d 186 (187)
T d2fi1a1 139 SMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 186 (187)
T ss_dssp HHHHHHHHTT--CSSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHHcC--CCCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcC
Confidence 2233444443 24589999999999999999988554455566666555
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.85 E-value=0.0021 Score=57.58 Aligned_cols=144 Identities=18% Similarity=0.244 Sum_probs=89.8
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc------ccCCchhh------hhhcCChHHHHhh
Q 012767 177 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSA------LSGQDRDE------SIVALPVDELIEK 244 (456)
Q Consensus 177 r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~------l~g~~~~~------~~~~~~~~~~~~~ 244 (456)
-||+.++++.+++. ....++|---..-..+++..+|++.+.+...+ +...+.++ .+......++.+.
T Consensus 83 vpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e~ 161 (308)
T d1y8aa1 83 VPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFRK 161 (308)
T ss_dssp CTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred cCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHHH
Confidence 47999999998765 67777777788889999999999754221110 10000000 1111111222111
Q ss_pred cc----------cccccCc---hhHHHHHHHHhhc-C-CEEEEecCCCCchhhhhhcCe--eEEec-cccHHHhhcccEE
Q 012767 245 AD----------GFAGVFP---EHKYEIVKHLQAR-N-HICGMIGNGVNDAPALKKADI--GIAVA-DATDAARSAADIV 306 (456)
Q Consensus 245 ~~----------v~a~~~P---~~K~~iV~~lq~~-g-~~v~~iGDG~ND~~aLk~Adv--GIa~~-~~~~~a~~aaDiv 306 (456)
.+ ++-.+.+ ..|..+++..-.. + ...+++||++.|..||+.|.= |+|++ ||.+-+...||+.
T Consensus 162 ~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~eA~Va 241 (308)
T d1y8aa1 162 LDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHADVV 241 (308)
T ss_dssp HHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTCSEE
T ss_pred HHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccccccceE
Confidence 11 1111221 3455555443322 1 235889999999999998843 77777 8889999999999
Q ss_pred eeCCCchHHHHHHHH
Q 012767 307 LTEPGLNVIITAVLI 321 (456)
Q Consensus 307 l~~~~l~~i~~~i~~ 321 (456)
+.+++...+..++.+
T Consensus 242 iiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 242 IISPTAMSEAKVIEL 256 (308)
T ss_dssp EECSSTHHHHHHHHH
T ss_pred EeccchhHHHHHHHH
Confidence 999998888777764
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.84 E-value=0.0024 Score=56.97 Aligned_cols=124 Identities=10% Similarity=0.107 Sum_probs=80.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++ |+++.++|+.+........+.+|+..- + ..++.+.+. ....-.|+
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~-f-d~i~~s~~~-----------------~~~KP~p~ 168 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY-F-DAIVIGGEQ-----------------KEEKPAPS 168 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG-C-SEEEEGGGS-----------------SSCTTCHH
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccc-c-ccccccccc-----------------ccchhhhh
Confidence 367999999999984 899999999999988999999998532 1 111111100 01111121
Q ss_pred hHHHHHHHHhhcCCEEEEecCCC-CchhhhhhcCee-EEecc----ccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAVAD----ATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvG-Ia~~~----~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
-=..+++.+.-....++||||.. +|+.+-+.||+. +.+-+ ........+|+++ +++..+..++.
T Consensus 169 ~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~ 238 (247)
T d2gfha1 169 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQ 238 (247)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHH
T ss_pred hHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEE--CCHHHHHHHHH
Confidence 11334455554456799999996 899999999996 54321 1222234578888 45888887776
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.40 E-value=0.00016 Score=60.12 Aligned_cols=95 Identities=13% Similarity=-0.005 Sum_probs=59.9
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHH----HHHHHH------H-hCCCCCCCCCccccCCchhhhhhcCChHHH
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAI----AKETGR------R-LGMGTNMYPSSALSGQDRDESIVALPVDEL 241 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~----a~~ia~------~-lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~ 241 (456)
.+.+.|++.+.++.|++.|++|+++||.+... ...+.. . .+.... .....
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~----~~~~~--------------- 94 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLV----MQCQR--------------- 94 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCS----EEEEC---------------
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEE----Eeecc---------------
Confidence 57899999999999999999999999986421 111111 0 011000 00000
Q ss_pred HhhcccccccCchhHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCee
Q 012767 242 IEKADGFAGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG 289 (456)
Q Consensus 242 ~~~~~v~a~~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvG 289 (456)
..--.+-.+.-|..+.+.+... ...++|+||...|+.|.+.+|+-
T Consensus 95 ---~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 95 ---EQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp ---CTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ---cccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 0000112235577777776655 44578899999999999999886
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=96.37 E-value=0.0026 Score=56.17 Aligned_cols=91 Identities=16% Similarity=0.238 Sum_probs=64.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH----HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccccc
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQL----AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 251 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~----~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~ 251 (456)
+-|++.+.++.+++.|++|+.+||+.. .+++.+-+.+|++........+.+.+ -
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~----------------------~ 144 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK----------------------P 144 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC----------------------T
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC----------------------C
Confidence 567999999999999999999999864 46666767789875433223332221 1
Q ss_pred CchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe-eEEe
Q 012767 252 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAV 292 (456)
Q Consensus 252 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~ 292 (456)
....|...|+. ..+++++||..+|..+-.+|++ +|-+
T Consensus 145 ~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 145 GQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp TCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 12345555543 4689999999999999888885 4444
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=96.32 E-value=0.003 Score=55.27 Aligned_cols=111 Identities=6% Similarity=0.011 Sum_probs=70.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
.++-|++.+.++.|++.|+++.++|+... +..+.+..|+.... + .++.+.+. ....-.|
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f-~-~i~~~~~~-----------------~~~KP~~ 148 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYF-D-AIADPAEV-----------------AASKPAP 148 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGC-S-EECCTTTS-----------------SSCTTST
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccc-c-cccccccc-----------------cccccCh
Confidence 34678999999999999999999999754 46677778875321 1 11111110 1112222
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe-eEEeccccHHHhhcccEEe
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADATDAARSAADIVL 307 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~~~~~a~~aaDivl 307 (456)
+-=..+.+.+.-....|+||||..+|+.+-+.||+ .|+++.+ .....++.++
T Consensus 149 ~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~--~~~~~~~~~~ 201 (221)
T d1o08a_ 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRP--EDLGDDIVIV 201 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCH--HHHCSSSEEE
T ss_pred HHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECCh--hhcccccEEc
Confidence 22234455555556679999999999999999997 4555432 2334455555
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.14 E-value=0.007 Score=52.75 Aligned_cols=125 Identities=10% Similarity=0.094 Sum_probs=77.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
.+.|++.+.+++|+ .+..++|+-....+..+-..+|+.... +..++.+++.. ...+.-.|+
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f-~~~~~~~~~~~---------------~~~~KP~~~ 145 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYF-APHIYSAKDLG---------------ADRVKPKPD 145 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGT-TTCEEEHHHHC---------------TTCCTTSSH
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhccccccccc-ceeeccccccc---------------ccccccCHH
Confidence 35788888887764 556789999999999999999986321 11111110000 001111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee-EEecccc-------HH-HhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADAT-------DA-ARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~~-------~~-a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.=....+.+.-....++||||..+|+.+-+.|++- |++..+. +. ...-+|+++ +++..+..++.
T Consensus 146 ~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll~ 218 (222)
T d2fdra1 146 IFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred HHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEE--CCHHHHHHHHH
Confidence 22345555555567899999999999999999974 4554332 11 223489998 45777766654
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=96.10 E-value=0.0055 Score=53.28 Aligned_cols=122 Identities=10% Similarity=0.101 Sum_probs=80.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
.+.+++.++++.++..|+++.++|+-............++..-. ..++...+. ....-.|+
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f--d~~~~s~~~-----------------~~~KP~p~ 153 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPV-----------------QVYKPDNR 153 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGG-----------------TCCTTSHH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccc--cceeeeeee-----------------eccccHHH
Confidence 35689999999999999999999999999888888887775210 111111000 01122222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE-ec---cccHHHhhcccEEeeCCCchHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VA---DATDAARSAADIVLTEPGLNVIIT 317 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~---~~~~~a~~aaDivl~~~~l~~i~~ 317 (456)
-=..+++.+.-....|+||||..+|+.+-+.||+-.. +. ...+.....+|+++ +++..+++
T Consensus 154 ~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~ 218 (220)
T d1zrna_ 154 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVE 218 (220)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHT
T ss_pred HHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHh
Confidence 2234556665556679999999999999999998744 32 22223344578887 45776654
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.75 E-value=0.0089 Score=51.83 Aligned_cols=106 Identities=8% Similarity=0.043 Sum_probs=66.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGD----QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 250 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD----~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~ 250 (456)
.+.|++.+.++.|++.|+++.++|+- ............|+..- + ..++.+. + .....
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~-f-d~i~~s~------------~-----~~~~K 157 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQH-F-DFLIESC------------Q-----VGMIK 157 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGG-C-SEEEEHH------------H-----HSCCT
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhh-h-ceeeehh------------h-----ccCCC
Confidence 36799999999999999999999963 23334444455554311 0 0011000 0 01122
Q ss_pred cCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe-eEEeccccHHH
Q 012767 251 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADATDAA 299 (456)
Q Consensus 251 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~~~~~a 299 (456)
-.|+--..+++.++-....++||||..+|+.+-+.||+ +|.+.++.+..
T Consensus 158 P~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~ 207 (222)
T d1cr6a1 158 PEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASAL 207 (222)
T ss_dssp TCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHH
T ss_pred CChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHH
Confidence 23444455666666667789999999999999999997 55555544433
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.57 E-value=0.002 Score=56.70 Aligned_cols=49 Identities=18% Similarity=0.355 Sum_probs=34.1
Q ss_pred hHHHHHHHHhhc-CCEEEEecC----CCCchhhhhhcC-eeEEeccccHHHhhccc
Q 012767 255 HKYEIVKHLQAR-NHICGMIGN----GVNDAPALKKAD-IGIAVADATDAARSAAD 304 (456)
Q Consensus 255 ~K~~iV~~lq~~-g~~v~~iGD----G~ND~~aLk~Ad-vGIa~~~~~~~a~~aaD 304 (456)
+|...++.|... ...|+++|| |.||.+||+.|+ .|+++++. +.++..++
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~-~~~~~~~~ 239 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAP-EDTRRICE 239 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSH-HHHHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCH-HHHHHHHH
Confidence 466666666543 567999999 889999999998 68888765 44444443
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.47 E-value=0.0052 Score=55.36 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=28.3
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh
Q 012767 178 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 212 (456)
Q Consensus 178 ~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~l 212 (456)
|++.++|+.|++.|++++++|+....+...+++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 78999999999999999999987755555555443
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=95.42 E-value=0.0067 Score=53.60 Aligned_cols=110 Identities=18% Similarity=0.104 Sum_probs=59.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCc--------HHHH-------HHHHHHhCCCCCCCCCccccCCchhhhhhcCChHH
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQ--------LAIA-------KETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~--------~~~a-------~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 240 (456)
+-|++.++|+.|++.|+++.++|.-. .... ...-+..|+....+ ... ...........
T Consensus 49 l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~---~~~-~~~~~~~~~~~--- 121 (209)
T d2o2xa1 49 LRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMV---LAC-AYHEAGVGPLA--- 121 (209)
T ss_dssp BCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEE---EEE-CCCTTCCSTTC---
T ss_pred ecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceE---EEe-ccccccccccc---
Confidence 56899999999999999999999522 0111 11222334321100 000 00000000000
Q ss_pred HHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe-eEEecc
Q 012767 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD 294 (456)
Q Consensus 241 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~ 294 (456)
.....+..-.|.--..+++.+.-....+.||||..+|..|-+.|++ +|.+..
T Consensus 122 --~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~ 174 (209)
T d2o2xa1 122 --IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVD 174 (209)
T ss_dssp --CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEET
T ss_pred --ccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeC
Confidence 0000111223333445556665555679999999999999999998 566643
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=95.28 E-value=0.053 Score=47.35 Aligned_cols=124 Identities=15% Similarity=0.167 Sum_probs=79.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
.++-+++.++++.|+ |+.+.++|..+...+...-+..|+.... ..++.+++. ....-.|
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f--d~v~~s~~~-----------------~~~KP~p 150 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAK-----------------RVFKPHP 150 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTSH
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccc--ccccccccc-----------------cccCccH
Confidence 356689999999885 7888999999998888888888875311 112221110 0111122
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE-ecccc--------------------------HHHhhcccEE
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VADAT--------------------------DAARSAADIV 306 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~~~~--------------------------~~a~~aaDiv 306 (456)
+-=..+++.+.-+...|+||||..+|+.+-+.||+--. +.... +......|++
T Consensus 151 ~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~ 230 (245)
T d1qq5a_ 151 DSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFV 230 (245)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEE
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEE
Confidence 22234556665555679999999999999999997432 32110 0111247888
Q ss_pred eeCCCchHHHHHHH
Q 012767 307 LTEPGLNVIITAVL 320 (456)
Q Consensus 307 l~~~~l~~i~~~i~ 320 (456)
+ +++..++.+|+
T Consensus 231 i--~~l~el~~lv~ 242 (245)
T d1qq5a_ 231 V--PALGDLPRLVR 242 (245)
T ss_dssp E--SSGGGHHHHHH
T ss_pred E--CCHHHHHHHHH
Confidence 8 56988888876
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=95.15 E-value=0.033 Score=49.92 Aligned_cols=60 Identities=25% Similarity=0.330 Sum_probs=40.9
Q ss_pred HHHHHHhhcCCEEEEecCCC-CchhhhhhcCe-eEEeccc--c-HHHhh---cccEEeeCCCchHHHHHH
Q 012767 258 EIVKHLQARNHICGMIGNGV-NDAPALKKADI-GIAVADA--T-DAARS---AADIVLTEPGLNVIITAV 319 (456)
Q Consensus 258 ~iV~~lq~~g~~v~~iGDG~-ND~~aLk~Adv-GIa~~~~--~-~~a~~---aaDivl~~~~l~~i~~~i 319 (456)
.+.+.+.-....++||||.. +|+.+-+.|++ +|.|..| + ..... .+|+++ +++..+..+|
T Consensus 193 ~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l 260 (261)
T d1vjra_ 193 VISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAV 260 (261)
T ss_dssp HHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHH
T ss_pred HHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEE--CCHHHHHHHh
Confidence 44555554567899999996 69999999997 6666422 2 22222 358888 4688887765
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=94.53 E-value=0.032 Score=49.86 Aligned_cols=43 Identities=14% Similarity=0.098 Sum_probs=30.9
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCc---HHHHHHHHHHhCCC
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQ---LAIAKETGRRLGMG 215 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~---~~~a~~ia~~lGi~ 215 (456)
.+.+=|++.++|+.|+++|++++++|+.. .....+.-+.+|+.
T Consensus 17 ~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 17 DNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 34444789999999999999999999544 34444444567764
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.11 E-value=0.02 Score=49.03 Aligned_cols=101 Identities=10% Similarity=0.029 Sum_probs=59.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHH----HHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccccc
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIA----KETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 251 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a----~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~ 251 (456)
+.|++.+.+..|++.|++++++|+...... .......++..- + ..++.+. + .....-
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~-f-d~i~~s~------------~-----~~~~KP 160 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH-F-DFLIESC------------Q-----VGMVKP 160 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT-S-SEEEEHH------------H-----HTCCTT
T ss_pred CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhh-c-cEEEecc------------c-----cccchh
Confidence 578999999999999999999997543322 122222222110 0 0111100 0 001111
Q ss_pred CchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe-eEEeccc
Q 012767 252 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADA 295 (456)
Q Consensus 252 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~~ 295 (456)
.|+-=..+++.+.-....++||||...|+.+-++||+ +|.+.++
T Consensus 161 ~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~ 205 (225)
T d1zd3a1 161 EPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT 205 (225)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred HHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCc
Confidence 2222234555555555679999999999999999999 5656543
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=93.82 E-value=0.064 Score=47.84 Aligned_cols=57 Identities=23% Similarity=0.283 Sum_probs=37.6
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCCC-chhhhhhcCe-eEEeccc---cHHHhhc---ccEEeeC
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGVN-DAPALKKADI-GIAVADA---TDAARSA---ADIVLTE 309 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~N-D~~aLk~Adv-GIa~~~~---~~~a~~a---aDivl~~ 309 (456)
|+--..+++.++-....|+||||..+ |+.+-++||+ +|.|..| .+..... .|+++.+
T Consensus 183 p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~s 247 (253)
T d1wvia_ 183 AVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSS 247 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESC
T ss_pred cccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECC
Confidence 33334556666656678999999975 9999999999 7777432 1122222 3888743
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=93.39 E-value=0.018 Score=48.41 Aligned_cols=99 Identities=10% Similarity=-0.028 Sum_probs=53.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCc--------HHHHH-------HHHHHhCCCCCCCCCccccCCchhhhhhcCChHH
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQ--------LAIAK-------ETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~--------~~~a~-------~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 240 (456)
+-|++.++++.|++.|+++.++|.-. ..... ..-...|+.... ..+......+.
T Consensus 31 ~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~---i~~~~~~~~~~-------- 99 (161)
T d2fpwa1 31 FEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDE---VLICPHLPADE-------- 99 (161)
T ss_dssp BCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEE---EEEECCCGGGC--------
T ss_pred ECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccce---eeecccccccc--------
Confidence 45899999999999999999999743 11111 122223332100 00000000000
Q ss_pred HHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 241 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
..+..-.|.-=.++++.+.-....++||||...|..|-+.|++--
T Consensus 100 -----~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~ 144 (161)
T d2fpwa1 100 -----CDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGING 144 (161)
T ss_dssp -----CSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEE
T ss_pred -----ccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeE
Confidence 001122233223344444444567999999999999999998763
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=89.26 E-value=0.014 Score=48.78 Aligned_cols=102 Identities=8% Similarity=0.012 Sum_probs=56.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh-CCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL-GMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~l-Gi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
+.+++.+.+..++..|+.+.++|+-....+...-... |+... + ..++.+ ++ .....-.|+
T Consensus 85 ~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~-f-d~v~~s------------~~-----~~~~Kp~~~ 145 (197)
T d2b0ca1 85 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA-A-DHIYLS------------QD-----LGMRKPEAR 145 (197)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH-C-SEEEEH------------HH-----HTCCTTCHH
T ss_pred cCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhh-c-cceeec------------cc-----ccccccchH
Confidence 5789999999999999999999975432221111110 11000 0 000000 00 001111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe-eEEecccc
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADAT 296 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~~~ 296 (456)
-=..+.+.+.-....|+||||..+|+.+-+.||+ +|.+.+..
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~ 188 (197)
T d2b0ca1 146 IYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 188 (197)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred HHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 2123445555456789999999999999999997 56555433
|